BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011378
(487 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/489 (62%), Positives = 389/489 (79%), Gaps = 2/489 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
MVNALCKD K++ FL ++++KGVYPD VTYNTLI+AY +G +EEAF+LMN+M GKG
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
PGV+TYN++INGLCK G+ +RAKEV EML+ GLSPD+ TY +LL+E+C+K ++ E E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++F +M R V PD+V FS+++ +F+R+G LD+ALMYF +K AGL+PDNV+YTI+I GY
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
CR G + A+ +R+EML++GC MDVVTYNTIL+GLC+ KML EAD LFNEM ER +FPD
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
YT T LI GHCK GN+ A+ LF M +K I+ D+VTYNTL+DGF KVG+++ A ++WAD
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S++I P ISY IL+N CS GH+ EAFR+W EM+ K IKPT++ CN++IKGYCRSG+
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ--GLVPDVITY 418
AS + FL KM+SEG PD ISYNTLI GFVREENM KAF LV KME + GLVPDV TY
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
N IL GFCRQ +M ++E++L +MIE+G+NPDRSTYT +ING VSQ+NL EAFR HDEMLQ
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Query: 479 RGFVPDDAF 487
RGF PDD F
Sbjct: 721 RGFSPDDKF 729
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 227/475 (47%), Gaps = 52/475 (10%)
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM-GLS----------------PDTATY 103
K + +++I+ L + GR A+ L M++ G+S + + +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
+ L+ + + EA E F + +G I + + LIG R G ++ A ++E+
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
+G+ + I++N C++G + + ++ EKG D+VTYNT+++ ++ E
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
A +L N M +G P YT+ T+I+G CK G +A +F M + + PD TY +L+
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 284 GFCKVGEMEKANKLWADMISRKISPNYIS------------------------------- 312
CK G++ + K+++DM SR + P+ +
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 313 ----YGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
Y ILI GYC G ++ A L EM+ +G +V+ NTI+ G C+ +AD+
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
++M + PDS + LI+G + N+ A L KM+ + + DV+TYN +L GF +
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
G + ++ I M+ K + P +Y+ L+N S+ +L EAFR DEM+ + P
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 182/366 (49%), Gaps = 17/366 (4%)
Query: 136 VSFSTLIGIFSRNGQL-DRALMYFREMKSAGLV----------------PDNVLYTIIIN 178
+S S +I I R+G+L D R ++ +G+ ++ ++ ++I
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173
Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
Y + + EA + + KG + + N ++ L R + A ++ E+ GV
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
+ YT +++ CKDG M K + +K + PDIVTYNTLI + G ME+A +L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
M + SP +Y +ING C G A ++ EM+ G+ P + +++ C+
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
GD + ++ S M S V PD + ++++++ F R N+DKA + ++ GL+PD + Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
+++ G+CR+G + + + M+++G D TY T+++G + L EA + +EM +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 479 RGFVPD 484
R PD
Sbjct: 474 RALFPD 479
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 118/245 (48%)
Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
F LI + + + +A F ++ K I N LI ++G +E A ++ ++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
+ N + I++N C G + + ++ KG+ P +V+ NT+I Y G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
+A E ++ M +G P +YNT+ING + ++A + ++M GL PD TY +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
L C++G + ++E + M + + PD ++++++ NL +A + + + + G
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 482 VPDDA 486
+PD+
Sbjct: 407 IPDNV 411
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 330 bits (846), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 278/486 (57%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+N C+ K+ A L + G PDT+T++TL+N +C EG + EA L++ M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T ++LINGLC KGR A ++D M++ G PD TY +L C+ N + A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++F +M R + +V +S +I ++G D AL F EM+ G+ D V Y+ +I G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C +G + KM EM+ + + DVVT++ +++ + L EA +L+NEM+ RG+ PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ +LI G CK+ +++A +FD+M K +PDIVTY+ LI+ +CK ++ +L+ +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ S+ + PN I+Y L+ G+C G + A L+ EMV +G+ P++V+ ++ G C +G+
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+KA E KM + YN +I+G +D A++L + ++G+ PDV+TYNV
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C++G + +++++ +M E G PD TY LI H+ + L + +EM G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 481 FVPDDA 486
F D +
Sbjct: 591 FSADSS 596
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 229/422 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N LC ++ A + + M + G PD VTY ++N C+ G A L M +
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+K V Y+ +I+ LCK G D A + +EM G+ D TY++L+ C +
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ EM R + PD+V+FS LI +F + G+L A + EM + G+ PD + Y +I+G+
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ + EA +M D M+ KGC D+VTY+ ++N C+AK + + LF E+ +G+ P+
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TL+ G C+ G +N A LF M + + P +VTY L+DG C GE+ KA +++
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M +++ Y I+I+G C+ V +A+ L+ + KG+KP +V+ N +I G C+ G
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
S+AD KM +G PD +YN LI + + + L+ +M+ G D T +
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600
Query: 421 IL 422
++
Sbjct: 601 VI 602
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 229/431 (53%)
Query: 46 LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
+ +A L SM P +N L + + + + D M G+ D T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
++ CRK+ + A + + G PD ++FSTL+ F G++ A+ M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
PD V + +ING C G V EAL + D M+E G D VTY +LN LC++ A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
DLF +M ER + ++ +I CKDG+ + AL+LF+ M K IK D+VTY++LI G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
C G+ + K+ +MI R I P+ +++ LI+ + G + EA L+ EM+ +GI P
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
++ N++I G+C+ +A++ MVS+G +PD ++Y+ LIN + + + +D L +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
+ ++GL+P+ ITYN ++ GFC+ G+++ ++ + M+ +G+ P TY L++G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 466 LKEAFRFHDEM 476
L +A ++M
Sbjct: 471 LNKALEIFEKM 481
Score = 239 bits (609), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 220/400 (55%), Gaps = 1/400 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N LCK A +ME++ + V Y+ +I++ C++G ++A L N M KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+K V TY+SLI GLC G+ D ++L EM+ + PD T++ L+ ++ + EA+
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E++ EM RG+APD +++++LI F + L A F M S G PD V Y+I+IN Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ V + +++ E+ KG + + +TYNT++ G C++ L A +LF EM+ RGV P
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ L+ G C +G +NKAL +F+ M + + I YN +I G C +++ A L+
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ + + P+ ++Y ++I G C G ++EA L+ +M G P + N +I+ +
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
+ E + +M G DS + +I+ + + +DK+F
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVID-MLSDRRLDKSF 614
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
V +A L+ M+ PT + N + R+ F M G++ D +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
+IN + R++ + AF+++ + G PD IT++ ++ GFC +GR+ ++ ++ RM+E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
PD T +TLING + + EA D M++ GF PD+
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 325 bits (833), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 268/453 (59%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ +C+ +I A L ME KG PD ++Y+T++N YCR G L++ ++L+ M KG
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
LKP + Y S+I LC+ + A+E EM++ G+ PDT Y TL+ C++ ++ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ F EM R + PD+++++ +I F + G + A F EM GL PD+V +T +INGY
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ G + +A ++ + M++ GC +VVTY T+++GLC+ L A++L +EM + G+ P+
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+ ++++G CK GN+ +A+ L + D VTY TL+D +CK GEM+KA ++ +
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+ + + P +++ +L+NG+C G + + +L M+ KGI P + N+++K YC +
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A M S GV PD +Y L+ G + NM +A+ L +M+ +G V TY+V
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
++ GF ++ + ++ + +M +GL D+ +
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 312 bits (800), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 282/481 (58%), Gaps = 1/481 (0%)
Query: 5 LCKD-HKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
L KD +K +A + E + GV + +YN +I+ C+ G ++EA L+ M KG P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 64 GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
V +Y++++NG C+ G D+ ++++ M + GL P++ Y +++ CR ++EAEE F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
EM R+G+ PD V ++TLI F + G + A +F EM S + PD + YT II+G+C+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
G ++EA K+ EM KG D VT+ ++NG C+A + +A + N M++ G P+ T+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 244 TTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS 303
TTLI G CK+G+++ A L M + ++P+I TYN++++G CK G +E+A KL + +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
++ + ++Y L++ YC G + +A + EM+GKG++PT+V+ N ++ G+C G
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
++ L+ M+++G+ P++ ++N+L+ + N+ A A+ M ++G+ PD TY ++
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
G C+ M ++ + M KG + STY+ LI G + + EA D+M + G
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 484 D 484
D
Sbjct: 700 D 700
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 129/233 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+VN LCK I+ A + E E G+ DTVTY TL++AYC+ G +++A +++ M GKG
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L+P + T+N L+NG C G + +++L+ ML G++P+ T+N+L+ + C + N+ A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
I+ +M RGV PD ++ L+ + + A F+EMK G Y+++I G+
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
+ LEA ++ D+M +G D ++ + + K D +E++E
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 312 bits (799), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 275/484 (56%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+N C+ K+ A + ++ + G PDTVT++TLIN C EG + EA +L++ M G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP + T N+L+NGLC G+ A ++D M++ G P+ TY +L C+ + A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+ +M R + D V +S +I ++G LD A F EM+ G D ++YT +I G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G + K+ +M+++ DVV ++ +++ + L EA++L EM++RG+ PD
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+T+LI G CK+ ++KA ++ D+M K P+I T+N LI+G+CK ++ +L+
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + + ++Y LI G+C +G + A L+ EMV + ++P +VS ++ G C +G+
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
KA E K+ ++ D YN +I+G +D A+ L + +G+ PDV TYN+
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C++G + +++L+ +M E G +P+ TY LI H+ + + ++ + +E+ + G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 481 FVPD 484
F D
Sbjct: 593 FSVD 596
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 234/436 (53%), Gaps = 1/436 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+VN LC + K+ A + + M + G P+ VTY ++ C+ G A +L+ M +
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+K Y+ +I+GLCK G D A + +EM G D Y TL+ C +
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ +M +R + PD+V+FS LI F + G+L A +EM G+ PD V YT +I+G+
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ + +A M D M+ KGC ++ T+N ++NG C+A ++ + +LF +M RGV D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLI G C+ G + A LF M + ++PDIV+Y L+DG C GE EKA +++
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ K+ + Y I+I+G C+ V +A+ L+ + KG+KP + + N +I G C+ G
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
S+AD KM +G P+ +YN LI + E + K+ L+ +++ G D T +
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602
Query: 421 ILTGFCRQGRMHDSEL 436
++ GR+ S L
Sbjct: 603 VVD-MLSDGRLKKSFL 617
Score = 245 bits (625), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 242/477 (50%)
Query: 8 DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
D K D A EM + P + ++ L + R + L M KG+ ++T
Sbjct: 50 DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109
Query: 68 YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
+ +IN C+ + A + +++++G PDT T++TL+ C + +SEA E+ M
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
G P +++ + L+ NG++ A++ M G P+ V Y ++ C++G
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
A+++ +M E+ +D V Y+ I++GLC+ L A +LFNEM +G D +TTLI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
G C G + L M ++ I PD+V ++ LID F K G++ +A +L +MI R IS
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
P+ ++Y LI+G+C + +A + MV KG P + + N +I GYC++ E
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
KM GV D+++YNTLI GF ++ A L +M ++ + PD+++Y ++L G C
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
G + I ++ + + D Y +I+G + + + +A+ + +G PD
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
+A L+ EM +P L+ + + R+ + +M +G+ + + + +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
N R + AF+ + K+ G PD +T++ ++ G C +GR+ ++ ++ RM+E G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
P T L+NG + +A D M++ GF P++
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 262/485 (54%), Gaps = 1/485 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ LCK + + L ++ ++GV P+ TYN I C+ G L+ A +++ + +G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP V TYN+LI GLCK + A+ L +M+ GL PD+ TYNTL+ C+ + AE
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
I + G PD ++ +LI G+ +RAL F E G+ P+ +LY +I G
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
G +LEA ++ +EM EKG + +V T+N ++NGLC+ +++AD L M+ +G FPD
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+TF LIHG+ M AL + D+M + PD+ TYN+L++G CK + E + +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+ + +PN ++ IL+ C + EA L EM K + P V+ T+I G+C++GD
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 361 ASKADEFLSKM-VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
A KM + V + +YN +I+ F + N+ A L +M ++ L PD TY
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
+++ GFC+ G ++ L M+E G P +T +IN ++ + EA M+Q+
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 480 GFVPD 484
G VP+
Sbjct: 702 GLVPE 706
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 247/476 (51%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ L D A M +G+ PD ++ + ++C+ A +L+N+MS +G
Sbjct: 117 IMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ V Y +++ G ++ E+ +ML G+S +T+N LL C+K ++ E E
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ ++ +RGV P++ +++ I + G+LD A+ + G PD + Y +I G
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+N EA +M+ +G D TYNT++ G C+ M+ A+ + + + G PD
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+ +LI G C +G N+AL LF+ K IKP+++ YNTLI G G + +A +L +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M + + P ++ IL+NG C MG V++A L M+ KG P + + N +I GY
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A E L M+ GVDPD +YN+L+NG + + M +G P++ T+N+
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
+L CR ++ ++ +L M K +NPD T+ TLI+G +L A+ +M
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 258 bits (658), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 138/417 (33%), Positives = 239/417 (57%), Gaps = 1/417 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ LCK+ K A+++L +M +G+ PD+ TYNTLI YC+ G ++ A +++ G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P FTY SLI+GLC +G +RA + +E L G+ P+ YNTL+ + + EA
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ EMS +G+ P++ +F+ L+ + G + A + M S G PD + I+I+GY
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ AL++ D ML+ G DV TYN++LNGLC+ + + + M+E+G P+
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+TF L+ C+ +++AL L + M KS+ PD VT+ TLIDGFCK G+++ A L+
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 301 MI-SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
M + K+S + +Y I+I+ + +VT A +L+ EMV + + P + ++ G+C++G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
+ + +FL +M+ G P + +IN E+ + +A ++ +M +GLVP+ +
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 260/518 (50%), Gaps = 36/518 (6%)
Query: 2 VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
+ + CK + +A L M +G + V Y T++ + E F E ++L M G+
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 62 KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
+ T+N L+ LCKKG +++LD++++ G+ P+ TYN + C++ + A
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
+ + +G PD+++++ LI +N + A +Y +M + GL PD+ Y +I GYC
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
+ G V A ++ + + G V D TY ++++GLC A LFNE L +G+ P+
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
+ TLI G G + +A L + M++K + P++ T+N L++G CK+G + A+ L M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
IS+ P+ ++ ILI+GY + + A + M+ G+ P + + N+++ G C++
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
E MV +G P+ ++N L+ R +D+A L+ +M+N+ + PD +T+ +
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 422 LTGFCRQG----------RMHD--------------------------SELILWRMIEKG 445
+ GFC+ G +M + +E + M+++
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
L PD TY +++G N+ ++F EM++ GF+P
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 230/457 (50%)
Query: 28 PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
P +YN +++ G+ ++A ++ M +G+ P V+++ + CK R A +
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 88 LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
L+ M G + Y T++ + +E E+F +M GV+ + +F+ L+ + +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
G + ++ G++P+ Y + I G C+ G + A++M ++E+G DV+T
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
YN ++ GLC+ EA+ +M+ G+ PD YT+ TLI G+CK G + A +
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
PD TY +LIDG C GE +A L+ + + + I PN I Y LI G + G +
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
EA +L EM KG+ P + + N ++ G C+ G S AD + M+S+G PD ++N LI
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
+G+ + M+ A ++ M + G+ PDV TYN +L G C+ + D M+EKG
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
P+ T+ L+ L EA +EM + PD
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 236/445 (53%)
Query: 40 YCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
Y R+G ++EA + M +P VF+YN++++ L G D+A +V M G++PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
++ + C+ A + MS +G ++V++ T++G F F
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
+M ++G+ + ++ C+ G V E K+ D+++++G + ++ TYN + GLC+
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
L A + ++E+G PD T+ LI+G CK+ +A M + ++PD TYN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
TLI G+CK G ++ A ++ D + P+ +Y LI+G C G A L+ E +GK
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 340 GIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKA 399
GIKP ++ NT+IKG G +A + ++M +G+ P+ ++N L+NG + + A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 400 FALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
LV M ++G PD+ T+N+++ G+ Q +M ++ IL M++ G++PD TY +L+NG
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 460 HVSQNNLKEAFRFHDEMLQRGFVPD 484
+ ++ + M+++G P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPN 530
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 237/474 (50%), Gaps = 37/474 (7%)
Query: 48 EAFQLMNSMSGK-GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNT 105
+A ++ NSM + G K + TY S+I L G+ + +EVL +M + +G Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
+ RK + EA +F M P + S++ ++ + +G D+A + M+ G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNG----------- 214
+ PD +TI + +C+ AL++ + M +GC M+VV Y T++ G
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 215 ------------------------LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
LC+ + E + L +++++RGV P+ +T+ I G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
C+ G ++ A+ + + ++ KPD++TYN LI G CK + ++A M++ + P+
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
+Y LI GYC G V A R+ + V G P + ++I G C G+ ++A ++
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
+ +G+ P+ I YNTLI G + + +A L ++M +GL+P+V T+N+++ G C+ G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+ D++ ++ MI KG PD T+ LI+G+ +Q ++ A D ML G PD
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 309 bits (791), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 277/482 (57%), Gaps = 20/482 (4%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ C ID A +ME KG P+ VTYNTLI+ YC+ +++ F+L+ SM+ KG
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L+P + +YN +INGLC++GR VL EM + G S D TYNTL+ C++ N +A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ EM R G+ P ++++++LI + G ++RA+ + +M+ GL P+ YT +++G+
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G++ EA ++ EM + G VVTYN ++NG C + +A + +M E+G+ PD
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+++T++ G C+ ++++AL + M +K IKPD +TY++LI GFC+ ++A L+ +
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+ + P+ +Y LIN YC G + +A +L EMV KG+ P +V+ + +I G +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+A L K+ E P ++Y+TLI EN S +E + +V
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLI------EN-------CSNIEFKSVVS------- 610
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ GFC +G M +++ + M+ K PD + Y +I+GH ++++A+ + EM++ G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 481 FV 482
F+
Sbjct: 671 FL 672
Score = 299 bits (765), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 256/461 (55%), Gaps = 1/461 (0%)
Query: 27 YPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR-CDRAK 85
Y + ++ ++ +Y R +++A +++ G PGV +YN++++ + R A+
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190
Query: 86 EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
V EML+ +SP+ TYN L+ C N+ A +F +M +G P++V+++TLI +
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
+ ++D R M GL P+ + Y ++ING CR G + E + EM +G +D
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
VTYNT++ G C+ +A + EML G+ P T+T+LIH CK GNMN+A+ D
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 266 MTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
M + + P+ TY TL+DGF + G M +A ++ +M SP+ ++Y LING+C G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
+ +A + +M KG+ P +VS +T++ G+CRS D +A +MV +G+ PD+I+Y++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
LI GF + +A L +M GL PD TY ++ +C +G + + + M+EKG
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
+ PD TY+ LING Q+ +EA R ++ VP D
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 591
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 180/352 (51%), Gaps = 50/352 (14%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++++CK ++ A FL +M +G+ P+ TY TL++ + ++G++ EA++++ M+ G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P V TYN+LING C G+ + A VL++M + GLSPD +Y+T+L CR ++ EA
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ EM +G+ PD +++S+LI F + A + EM GL PD YT +IN Y
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL------------------------- 215
C G + +AL++ +EM+EKG + DVVTY+ ++NGL
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 216 -------------------------CRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
C M+TEAD +F ML + PD + +IHGH
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
C+ G++ KA L+ M + VT L+ K G++ + N + ++
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLI---------------NAYCREGF 45
++N L K + AK L ++ + P VTY+TLI +C +G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 46 LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
+ EA Q+ SM GK KP YN +I+G C+ G +A + EM++ G T T
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680
Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
L+ ++ ++E + + R + L+ I R G +D L EM G
Sbjct: 681 LVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
Query: 166 LVPDNV 171
+P+ +
Sbjct: 741 FLPNGI 746
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 59/137 (43%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ C + A M K PD YN +I+ +CR G + +A+ L M G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
T +L+ L K+G+ + V+ +L+ + L+ + R+ NM
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 121 EIFCEMSRRGVAPDIVS 137
++ EM++ G P+ +S
Sbjct: 731 DVLAEMAKDGFLPNGIS 747
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 256/466 (54%), Gaps = 3/466 (0%)
Query: 17 FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
FL M G PD + TLI +CR G +A +++ + G G P V TYN +I+G C
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 77 KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
K G + A VLD +M +SPD TYNT+L C + +A E+ M +R PD++
Sbjct: 184 KAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
+++ LI R+ + A+ EM+ G PD V Y +++NG C+ G + EA+K ++M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
GC +V+T+N IL +C +A+ L +ML +G P TF LI+ C+ G +
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
+A+++ + M Q +P+ ++YN L+ GFCK +M++A + M+SR P+ ++Y +
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
+ C G V +A + ++ KG P L++ NT+I G ++G KA + L +M ++ +
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
PD+I+Y++L+ G RE +D+A + E G+ P+ +T+N I+ G C+ + +
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
L MI +G P+ ++YT LI G + KEA +E+ +G +
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 285 bits (729), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 245/446 (54%), Gaps = 3/446 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ C+ K A L +E G PD +TYN +I+ YC+ G + A +++ MS
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--- 199
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P V TYN+++ LC G+ +A EVLD MLQ PD TY L+ +CR + A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ EM RG PD+V+++ L+ + G+LD A+ + +M S+G P+ + + II+
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G ++A K+ +ML KG VVT+N ++N LCR +L A D+ +M + G P+
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
++ L+HG CK+ M++A+ + M + PDIVTYNT++ CK G++E A ++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ S+ SP I+Y +I+G G +A +L EM K +KP ++ ++++ G R G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+A +F + G+ P+++++N+++ G + D+A + M N+G P+ +Y +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGL 446
++ G +G ++ +L + KGL
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585
Score = 269 bits (688), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 213/381 (55%), Gaps = 3/381 (0%)
Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
N L + R + E + M G PDI+ +TLI F R G+ +A ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
+G VPD + Y ++I+GYC+ G + AL + D M DVVTYNTIL LC + L +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
A ++ + ML+R +PD T+T LI C+D + A+ L D M + PD+VTYN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
G CK G +++A K DM S PN I++ I++ CS G +A +L +M+ KG P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
++V+ N +I CR G +A + L KM G P+S+SYN L++GF +E+ MD+A +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
+M ++G PD++TYN +LT C+ G++ D+ IL ++ KG +P TY T+I+G
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
+A + DEM + PD
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPD 483
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 140/283 (49%), Gaps = 3/283 (1%)
Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
++ V N L + R L E M+ G PD TTLI G C+ G KA
Sbjct: 99 ALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158
Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
+ +I+ PD++TYN +I G+CK GE+ A + M +SP+ ++Y ++ C
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLC 215
Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
G + +A + M+ + P +++ +I+ CR A + L +M G PD +
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
+YN L+NG +E +D+A ++ M + G P+VIT+N+IL C GR D+E +L M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 442 IEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+ KG +P T+ LIN + L A ++M Q G P+
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 91/167 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+ ALCKD K++ A L ++ KG P +TYNT+I+ + G +A +L++ M K
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
LKP TY+SL+ GL ++G+ D A + E +MG+ P+ T+N++++ C+ A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLV 167
+ M RG P+ S++ LI + G AL E+ + GL+
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 305 bits (781), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 269/484 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K K D F +ME GV + TYN +IN CR L A ++ M G
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P + T NSL+NG C R A ++D+M++MG PDT T+ TL+ + SEA
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M +G PD+V++ +I + G+ D AL +M+ + D V+Y+ +I+
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ V +AL + EM KG DV TY+++++ LC ++A L ++MLER + P+
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF +LI K+G + +A LFD M Q+SI P+IVTYN+LI+GFC +++A +++
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S+ P+ ++Y LING+C V + L+ +M +G+ V+ T+I G+ ++ D
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A +MVS+GV P+ ++YNTL++G + ++KA + ++ + PD+ TYN+
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+ G C+ G++ D + + KG+ PD Y T+I+G + +EA+ +M + G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 481 FVPD 484
+PD
Sbjct: 551 PLPD 554
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 258/484 (53%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+N LC+ ++ A L +M + G P VT N+L+N +C + EA L++ M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P T+ +L++GL + + A +++ M+ G PD TY ++ C++ A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M + + D+V +ST+I + +D AL F EM + G+ PD Y+ +I+
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G +A ++ +MLE+ +VVT+N++++ + L EA+ LF+EM++R + P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ +LI+G C +++A +F +M K PD+VTYNTLI+GFCK ++ +L+ D
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + N ++Y LI+G+ A ++ +MV G+ P +++ NT++ G C++G
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
KA + ++PD +YN + G + ++ + L + +G+ PDVI YN
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+++GFC++G ++ + +M E G PD TY TLI H+ + + EM
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Query: 481 FVPD 484
F D
Sbjct: 586 FAGD 589
Score = 271 bits (694), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 240/431 (55%), Gaps = 1/431 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+V+ L + +K A + M KG PD VTY +IN C+ G + A L+N M
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
++ V Y+++I+ LCK D A + EM G+ PD TY++L+ C S+A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M R + P++V+F++LI F++ G+L A F EM + P+ V Y +ING+
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C + + EA ++ M+ K C+ DVVTYNT++NG C+AK + + +LF +M RG+ +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+TTLIHG + + + A +F M + P+I+TYNTL+DG CK G++EKA ++
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ K+ P+ +Y I+ G C G V + + L+ + KG+KP +++ NT+I G+C+ G
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+A KM +G PDS +YNTLI +R+ + + L+ +M + D TY +
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL 595
Query: 421 ILTGFCRQGRM 431
+ T GR+
Sbjct: 596 V-TDMLHDGRL 605
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 304 bits (778), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 273/498 (54%), Gaps = 39/498 (7%)
Query: 1 MVNALCKDHKI-DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMS-- 57
++ LC D + D+ + L M + G P+ +YN L+ C E +EA +L++ M+
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 58 -GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
G G P V +Y ++ING K+G D+A EML G+ PD TYN+++ C+ + M
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
+A E+ M + GV PD +++++++ + +GQ A+ + ++M+S G+ PD V Y+++
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
++ C+NG +EA K+ D M ++G ++ TY T+L G L E L + M+ G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY------------------ 278
PD Y F+ LI + K G +++A+ +F M Q+ + P+ VTY
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 279 -----------------NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
N+LI G C + E+A +L +M+ R I N I + +I+ +C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
G V E+ +L+ MV G+KP +++ NT+I GYC +G +A + LS MVS G+ P+++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRM 441
+Y+TLING+ + M+ A L +ME+ G+ PD+ITYN+IL G + R ++ + R+
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 442 IEKGLNPDRSTYTTLING 459
E G + STY +++G
Sbjct: 608 TESGTQIELSTYNIILHG 625
Score = 299 bits (765), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 269/484 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ ALCK +D A L M + GV PD +TYN++++ YC G +EA + M G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
++P V TY+ L++ LCK GRC A+++ D M + GL P+ TY TLL K + E
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M R G+ PD FS LI +++ G++D+A++ F +M+ GL P+ V Y +I
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C++G V +A+ ++M+++G + YN++++GLC A++L EML+RG+ +
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
F ++I HCK+G + ++ LF++M + +KP+++TYNTLI+G+C G+M++A KL +
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S + PN ++Y LINGYC + + +A L+ EM G+ P +++ N I++G ++
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+ A E ++ G + +YN +++G + + D A + + L + T+N+
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ + GR +++ + GL P+ TY + + Q L+E + M G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 481 FVPD 484
D
Sbjct: 717 CTVD 720
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 251/498 (50%), Gaps = 39/498 (7%)
Query: 26 VYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
V PD TY LI CR G L+ F + ++ KG + + L+ GLC R A
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 86 E-VLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR---GVAPDIVSFSTL 141
+ VL M ++G P+ +YN LL C + EA E+ M+ G PD+VS++T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 142 IGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGC 201
I F + G D+A + EM G++PD V Y II C+ + +A+++ + M++ G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 202 VMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALN 261
+ D +TYN+IL+G C + EA +M GV PD T++ L+ CK+G +A
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 262 LFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYC 321
+FD MT++ +KP+I TY TL+ G+ G + + + L M+ I P++ + ILI Y
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 322 SMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI 381
G V +A ++ +M +G+ P V+ +I C+SG A + +M+ EG+ P +I
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 382 SYNTLINGFVREENMDKAFALVSKMENQGLV----------------------------- 412
YN+LI+G ++A L+ +M ++G+
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 413 ------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNL 466
P+VITYN ++ G+C G+M ++ +L M+ GL P+ TY+TLING+ + +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 467 KEAFRFHDEMLQRGFVPD 484
++A EM G PD
Sbjct: 563 EDALVLFKEMESSGVSPD 580
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 206/396 (52%), Gaps = 4/396 (1%)
Query: 96 LSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRA 154
++PD TY L+ CR + + ++G D ++F+ L+ G+ + D
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 155 LMYFREMKSAGLVPDNVLYTIIINGYC---RNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
+ R M G +P+ Y I++ G C R+ LE L M + G DVV+Y T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
+NG + +A ++EML+RG+ PD T+ ++I CK M+KA+ + + M + +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
PD +TYN+++ G+C G+ ++A M S + P+ ++Y +L++ C G EA +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
++ M +G+KP + + T+++GY G + L MV G+ PD ++ LI +
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
++ +D+A + SKM QGL P+ +TY ++ C+ GR+ D+ L +MI++GL+P
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
Y +LI+G + N + A EML RG + F
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 204/374 (54%), Gaps = 1/374 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ A K K+D A + +M Q+G+ P+ VTY +I C+ G +E+A M +G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L PG YNSLI+GLC + +RA+E++ EML G+ +T +N+++ C++ + E+E
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++F M R GV P++++++TLI + G++D A+ M S GL P+ V Y+ +INGY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ + +AL + EM G D++TYN IL GL + + A +L+ + E G +
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ ++HG CK+ + AL +F + +K + T+N +ID KVG ++A L+
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
S + PNY +Y ++ G + E +L+ M G N I++ + G+
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 361 ASKADEFLSKMVSE 374
++A +LS M+ E
Sbjct: 737 ITRAGTYLS-MIDE 749
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 39/219 (17%)
Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK---------------------- 342
+++P+ +YGILI C G + F ++ KG +
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 343 --------------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSE---GVDPDSISYNT 385
P + S N ++KG C + +A E L M + G PD +SY T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
+INGF +E + DKA++ +M ++G++PDV+TYN I+ C+ M + +L M++ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+ PD TY ++++G+ S KEA F +M G PD
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 273/484 (56%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+N C+ K+ A + ++ + G P+T+T++TLIN C EG + EA +L++ M G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP + T N+L+NGLC G+ A ++D+M++ G P+ TY +L C+ + A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+ +M R + D V +S +I ++G LD A F EM+ G+ + + Y I+I G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G + K+ +M+++ +VVT++ +++ + L EA++L EM+ RG+ PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+T+LI G CK+ +++KA + D+M K P+I T+N LI+G+CK ++ +L+
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + + ++Y LI G+C +G + A L+ EMV + + P +V+ ++ G C +G+
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+ KA E K+ ++ D YN +I+G +D A+ L + +G+ P V TYN+
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C++G + ++EL+ +M E G PD TY LI H+ + ++ + +E+ + G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 481 FVPD 484
F D
Sbjct: 609 FSVD 612
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 258/484 (53%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+ +A+ K + D +ME KG+ + T + +IN +CR L AF M + G
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P T+++LINGLC +GR A E++D M++MG PD T NTL+ C +EA
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M G P+ V++ ++ + ++GQ A+ R+M+ + D V Y+III+G
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C++G + A + +EM KG +++TYN ++ G C A + L +M++R + P+
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF+ LI K+G + +A L M + I PD +TY +LIDGFCK ++KAN++
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S+ PN ++ ILINGYC + + L+ +M +G+ V+ NT+I+G+C G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+ A E +MVS V P+ ++Y L++G +KA + K+E + D+ YN+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
I+ G C ++ D+ + + KG+ P TY +I G + L EA +M + G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 481 FVPD 484
PD
Sbjct: 574 HAPD 577
Score = 262 bits (669), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 237/436 (54%), Gaps = 1/436 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+VN LC K A + + +M + G P+ VTY ++N C+ G A +L+ M +
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+K Y+ +I+GLCK G D A + +EM G++ + TYN L+ C +
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ +M +R + P++V+FS LI F + G+L A +EM G+ PD + YT +I+G+
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ + +A +M D M+ KGC ++ T+N ++NG C+A + + +LF +M RGV D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLI G C+ G +N A LF M + + P+IVTY L+DG C GE EKA +++
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ K+ + Y I+I+G C+ V +A+ L+ + KG+KP + + N +I G C+ G
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
S+A+ KM +G PD +YN LI + + + K+ L+ +++ G D T +
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Query: 421 ILTGFCRQGRMHDSEL 436
++ GR+ S L
Sbjct: 619 VID-MLSDGRLKKSFL 633
Score = 249 bits (636), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 238/460 (51%)
Query: 17 FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
F CE ++Y + + + ++A L M P V ++ L + +
Sbjct: 40 FCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIA 99
Query: 77 KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
K + D + +M G++ + T + ++ CR + A ++ + G P+ +
Sbjct: 100 KTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTI 159
Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
+FSTLI G++ AL M G PD + ++NG C +G EA+ + D+M
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
+E GC + VTY +LN +C++ A +L +M ER + D ++ +I G CK G++
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
+ A NLF+ M K I +I+TYN LI GFC G + KL DMI RKI+PN +++ +L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
I+ + G + EA L EM+ +GI P ++ ++I G+C+ KA++ + MVS+G
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
DP+ ++N LING+ + +D L KM +G+V D +TYN ++ GFC G+++ ++
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
+ M+ + + P+ TY L++G ++A +++
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 247/476 (51%)
Query: 8 DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
D K D A +M P + ++ L +A + + L M KG+ ++T
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 68 YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
+ +IN C+ + A + +++++G P+T T++TL+ C + +SEA E+ M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
G PD+++ +TL+ +G+ A++ +M G P+ V Y ++N C++G
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
A+++ +M E+ +D V Y+ I++GLC+ L A +LFNEM +G+ + T+ LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
G C G + L M ++ I P++VT++ LID F K G++ +A +L +MI R I+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
P+ I+Y LI+G+C H+ +A ++ MV KG P + + N +I GYC++ E
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
KM GV D+++YNTLI GF ++ A L +M ++ + P+++TY ++L G C
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
G + I ++ + + D Y +I+G + + + +A+ + +G P
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 220/405 (54%)
Query: 80 RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
+ D A ++ +M+ P ++ L + + + +M +G+A ++ + S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
+I F R +L A ++ G P+ + ++ +ING C G V EAL++ D M+E
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
G D++T NT++NGLC + EA L ++M+E G P+ T+ +++ CK G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
+ L M +++IK D V Y+ +IDG CK G ++ A L+ +M + I+ N I+Y ILI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
+C+ G + +L +M+ + I P +V+ + +I + + G +A+E +M+ G+ PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
+I+Y +LI+GF +E ++DKA +V M ++G P++ T+N+++ G+C+ R+ D +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+M +G+ D TY TLI G L A EM+ R P+
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 301 bits (772), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 272/485 (56%), Gaps = 5/485 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ A C ++IDSA L +M + G P++V Y TLI++ + + EA QL+ M G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P T+N +I GLCK R + A ++++ ML G +PD TY L+ C+ + A+
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
++F + + P+IV F+TLI F +G+LD A +M S G+VPD Y +I G
Sbjct: 343 DLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
Y + G V AL++ +M KGC +V +Y +++G C+ + EA ++ NEM G+ P+
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
F LI CK+ + +A+ +F M +K KPD+ T+N+LI G C+V E++ A L
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
DMIS + N ++Y LIN + G + EA +L EMV +G ++ N++IKG CR+G
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
+ KA KM+ +G P +IS N LING R +++A +M +G PD++T+N
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
++ G CR GR+ D + ++ +G+ PD T+ TL++ + +A DE ++
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Query: 480 GFVPD 484
GFVP+
Sbjct: 699 GFVPN 703
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/522 (29%), Positives = 251/522 (48%), Gaps = 43/522 (8%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSG-K 59
++ L + + + L +M+ +G+ + +++ Y + GF + +LM M
Sbjct: 117 LIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVY 176
Query: 60 GLKPGVFTYNSLINGLCKKGRCDR-AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSE 118
+P +YN ++ L G C + A V +ML + P T+ ++ C +
Sbjct: 177 SCEPTFKSYNVVLEILVS-GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 119 AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIIN 178
A + +M++ G P+ V + TLI S+ +++ AL EM G VPD + +I
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
G C+ + EA KM + ML +G D +TY ++NGLC+ + A DLF + + P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 351
Query: 239 DFYTFTTLIHGHCKDGNMNKALN-LFDIMTQKSIKPDIVTYNTLI--------------- 282
+ F TLIHG G ++ A L D++T I PD+ TYN+LI
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 283 --------------------DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
DGFCK+G++++A + +M + + PN + + LI+ +C
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
+ EA ++ EM KG KP + + N++I G C + A L M+SEGV ++++
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
YNTLIN F+R + +A LV++M QG D ITYN ++ G CR G + + + +M+
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
G P + LING ++EA F EM+ RG PD
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 218/399 (54%), Gaps = 5/399 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM-SGK 59
++N LCK ++D+AK + + P+ V +NTLI+ + G L++A +++ M +
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 60 GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
G+ P V TYNSLI G K+G A EVL +M G P+ +Y L+ C+ + EA
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
+ EMS G+ P+ V F+ LI F + ++ A+ FREM G PD + +I+G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
C + AL + +M+ +G V + VTYNT++N R + EA L NEM+ +G D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
T+ +LI G C+ G ++KA +LF+ M + P ++ N LI+G C+ G +E+A +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
+M+ R +P+ +++ LING C G + + ++ ++ +GI P V+ NT++ C+ G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
A L + + +G P+ +++ L+ + +E +D+
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 192/411 (46%), Gaps = 48/411 (11%)
Query: 115 NMSEAEEIFCEM-SRRGVAPDIVSFSTLIGIFSRNGQ---LDRALMYFREMKSAGLVPDN 170
N+S + E+F S+ G + LIG NG+ +DR L+ +MK G+V
Sbjct: 90 NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI---QMKDEGIVFKE 146
Query: 171 VLYTIIINGYCRNGFVLEA----LKMRD-------------------------------- 194
L+ I+ Y + GF + L+MR+
Sbjct: 147 SLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY 206
Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
+ML + + T+ ++ C + A L +M + G P+ + TLIH K
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
+N+AL L + M PD T+N +I G CK + +A K+ M+ R +P+ I+YG
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-S 373
L+NG C +G V A L+Y + KP +V NT+I G+ G A LS MV S
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 374 EGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHD 433
G+ PD +YN+LI G+ +E + A ++ M N+G P+V +Y +++ GFC+ G++ +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 434 SELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+ +L M GL P+ + LI+ ++ + EA EM ++G PD
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ LC+ ++D A+ +M + G P ++ N LIN CR G +EEA + M +G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P + T+NSLINGLC+ GR + + ++ G+ PDT T+NTL+ C+ + +A
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMY 157
+ E G P+ ++S L+ LDR Y
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 266/484 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K +K D M+ + D +YN LIN +CR L A ++ M G
Sbjct: 86 LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T +SL+NG C R A ++D+M M P+T T+NTL+ SEA
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M RG PD+ ++ T++ + G +D AL ++M+ + D V+YT II+
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C V +AL + EM KG +VVTYN+++ LC ++A L ++M+ER + P+
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF+ LI K+G + +A L+D M ++SI PDI TY++LI+GFC +++A ++
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
MIS+ PN ++Y LI G+C V E L+ EM +G+ V+ NT+I+G ++GD
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A + KMVS+GV PD I+Y+ L++G + ++KA + ++ + PD+ TYN+
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C+ G++ D + + KG+ P+ YTT+I+G + +EA EM + G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 481 FVPD 484
+P+
Sbjct: 566 TLPN 569
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 260/484 (53%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C+ ++ A L +M + G PD VT ++L+N YC + EA L++ M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P T+N+LI+GL + A ++D M+ G PD TY T++ C++ ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M + + D+V ++T+I ++ AL F EM + G+ P+ V Y +I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G +A ++ +M+E+ +VVT++ +++ + L EA+ L++EM++R + PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+++LI+G C +++A ++F++M K P++VTYNTLI GFCK +E+ +L+ +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + N ++Y LI G G A +++ +MV G+ P +++ + ++ G C+ G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
KA + ++PD +YN +I G + ++ + L + +G+ P+VI Y
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+++GFCR+G +++ + M E G P+ TY TLI + + + EM G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 481 FVPD 484
FV D
Sbjct: 601 FVGD 604
Score = 268 bits (684), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 252/458 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C +I A + +M P+TVT+NTLI+ EA L++ M +G
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P +FTY +++NGLCK+G D A +L +M + + D Y T++ C +N+++A
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+F EM +G+ P++V++++LI G+ A +M + P+ V ++ +I+ +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G ++EA K+ DEM+++ D+ TY++++NG C L EA +F M+ + FP+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLI G CK + + + LF M+Q+ + + VTYNTLI G + G+ + A K++
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S + P+ I+Y IL++G C G + +A ++ + ++P + + N +I+G C++G
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+ + +GV P+ I Y T+I+GF R+ ++A AL +M+ G +P+ TYN
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
++ R G S ++ M G D ST + +IN
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 117/215 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ CK +++ EM Q+G+ +TVTYNTLI + G + A ++ M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P + TY+ L++GLCK G+ ++A V + + + + PD TYN ++ C+ + +
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++FC +S +GV P+++ ++T+I F R G + A FREMK G +P++ Y +I
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGL 215
R+G + ++ EM G V D T + ++N L
Sbjct: 581 LRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 254/469 (54%)
Query: 17 FLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLC 76
FL EM ++ + PD T+N LIN C EG E++ LM M G P + TYN++++ C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 77 KKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIV 136
KKGR A E+LD M G+ D TYN L+ + CR +++ + +M +R + P+ V
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 137 SFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM 196
+++TLI FS G++ A EM S GL P++V + +I+G+ G EALKM M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 197 LEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNM 256
KG V+Y +L+GLC+ A + M GV T+T +I G CK+G +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 257 NKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGIL 316
++A+ L + M++ I PDIVTY+ LI+GFCKVG + A ++ + +SPN I Y L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 317 INGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
I C MG + EA R++ M+ +G + N ++ C++G ++A+EF+ M S+G+
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
P+++S++ LING+ KAF++ +M G P TY +L G C+ G + ++E
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
L + D Y TL+ NL +A EM+QR +PD
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 256/480 (53%), Gaps = 1/480 (0%)
Query: 6 CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
CK + +A L M+ KGV D TYN LI+ CR + + + L+ M + + P
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 66 FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
TYN+LING +G+ A ++L+EML GLSP+ T+N L+ + N EA ++F
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
M +G+ P VS+ L+ +N + D A ++ MK G+ + YT +I+G C+NGF
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
+ EA+ + +EM + G D+VTY+ ++NG C+ A ++ + G+ P+ ++T
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
LI+ C+ G + +A+ +++ M + D T+N L+ CK G++ +A + M S
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
I PN +S+ LINGY + G +AF ++ EM G PT + +++KG C+ G +A+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
+FL + + D++ YNTL+ + N+ KA +L +M + ++PD TY +++G
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 426 CRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
CR+G+ + L +G + P++ YT ++G K F ++M G PD
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718
Score = 275 bits (702), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 277/558 (49%), Gaps = 73/558 (13%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ LCK+ + D A+ F M++ GV +TY +I+ C+ GFL+EA L+N MS G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P + TY++LING CK GR AKE++ + ++GLSP+ Y+TL+ CR + EA
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
I+ M G D +F+ L+ + G++ A + R M S G++P+ V + +INGY
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553
Query: 181 CRNGFVLEALKMRDEMLEKG-----------------------------------CVMDV 205
+G L+A + DEM + G +D
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613
Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF-- 263
V YNT+L +C++ L +A LF EM++R + PD YT+T+LI G C+ G A+ LF
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAK 672
Query: 264 ------DIMTQKSI-----------------------------KPDIVTYNTLIDGFCKV 288
+++ K + PDIVT N +IDG+ ++
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732
Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
G++EK N L +M ++ PN +Y IL++GY V+ +F L+ ++ GI P ++C
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
++++ G C S + L + GV+ D ++N LI+ ++ AF LV M +
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKE 468
G+ D T + +++ R R +S ++L M ++G++P+ Y LING ++K
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 469 AFRFHDEMLQRGFVPDDA 486
AF +EM+ P +
Sbjct: 913 AFVVKEEMIAHKICPPNV 930
Score = 254 bits (650), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 246/485 (50%), Gaps = 1/485 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N + K+ A L EM G+ P+ VT+N LI+ + EG +EA ++ M KG
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L P +Y L++GLCK D A+ M + G+ TY ++ C+ + EA
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ EMS+ G+ PDIV++S LI F + G+ A + GL P+ ++Y+ +I
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
CR G + EA+++ + M+ +G D T+N ++ LC+A + EA++ M G+ P+
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+F LI+G+ G KA ++FD MT+ P TY +L+ G CK G + +A K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ + + + + Y L+ C G++ +A L+ EMV + I P + ++I G CR G
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Query: 361 ASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
A F + + G V P+ + Y ++G + +M+N G PD++T N
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
++ G+ R G++ + +L M + P+ +TY L++G+ + ++ +F + ++
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783
Query: 480 GFVPD 484
G +PD
Sbjct: 784 GILPD 788
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 234/452 (51%)
Query: 32 TYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEM 91
Y+ LI Y REG ++++ ++ M G P V+T N+++ + K G L EM
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 92 LQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQL 151
L+ + PD AT+N L+ C + + ++ + +M + G AP IV+++T++ + + G+
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 152 DRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTI 211
A+ MKS G+ D Y ++I+ CR+ + + + +M ++ + VTYNT+
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 212 LNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSI 271
+NG + A L NEML G+ P+ TF LI GH +GN +AL +F +M K +
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364
Query: 272 KPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
P V+Y L+DG CK E + A + M + I+Y +I+G C G + EA
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
L EM GI P +V+ + +I G+C+ G A E + ++ G+ P+ I Y+TLI
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
R + +A + M +G D T+NV++T C+ G++ ++E + M G+ P+
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544
Query: 452 TYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
++ LING+ + +AF DEM + G P
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 250/485 (51%), Gaps = 1/485 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+V +LCK K+ A+ F+ M G+ P+TV+++ LIN Y G +AF + + M+ G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P FTY SL+ GLCK G A++ L + + + DT YNTLL C+ N+++A
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG-LVPDNVLYTIIING 179
+F EM +R + PD ++++LI R G+ A+++ +E ++ G ++P+ V+YT ++G
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDG 693
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
+ G + R++M G D+VT N +++G R + + +DL EM + P+
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
T+ L+HG+ K +++ + L+ + I PD +T ++L+ G C+ +E K+
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
I R + + ++ +LI+ C+ G + AF L M GI +C+ ++ R+
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 873
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
++ L +M +G+ P+S Y LING R ++ AF + +M + P + +
Sbjct: 874 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 933
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
++ + G+ ++ L+L M++ L P +++TTL++ N+ EA M
Sbjct: 934 AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 993
Query: 480 GFVPD 484
G D
Sbjct: 994 GLKLD 998
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 210/388 (54%)
Query: 97 SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
+ + + Y+ L+ R+ + ++ EIF M G P + + + ++G ++G+
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
+ +EM + PD + I+IN C G ++ + +M + G +VTYNT+L+ C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
+ A +L + M +GV D T+ LIH C+ + K L M ++ I P+ V
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
TYNTLI+GF G++ A++L +M+S +SPN++++ LI+G+ S G+ EA +++Y M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
KG+ P+ VS ++ G C++ + A F +M GV I+Y +I+G + +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
D+A L+++M G+ PD++TY+ ++ GFC+ GR ++ I+ R+ GL+P+ Y+TL
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
I LKEA R ++ M+ G D
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 195/430 (45%), Gaps = 36/430 (8%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREG-------FLEEAFQLM 53
++ A+CK + A EM Q+ + PD+ TY +LI+ CR+G F +EA
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 54 NSMSGK-----------------------------GLKPGVFTYNSLINGLCKKGRCDRA 84
N + K G P + T N++I+G + G+ ++
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 85 KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
++L EM P+ TYN LL +++++S + ++ + G+ PD ++ +L+
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
+ L+ L + G+ D + ++I+ C NG + A + M G +D
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
T + +++ L R E+ + +EM ++G+ P+ + LI+G C+ G++ A + +
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918
Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
M I P V + ++ K G+ ++A L M+ K+ P S+ L++ C G
Sbjct: 919 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978
Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
+V EA L M G+K LVS N +I G C GD + A E +M +G ++ +Y
Sbjct: 979 NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038
Query: 385 TLINGFVREE 394
LI G + E
Sbjct: 1039 ALIRGLLARE 1048
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%)
Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
+ LI + ++G + +L +F +M P + T N ++ K GE +M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
+ RKI P+ ++ ILIN C+ G ++ L +M G PT+V+ NT++ YC+ G
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
A E L M S+GVD D +YN LI+ R + K + L+ M + + P+ +TYN +
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
+ GF +G++ + +L M+ GL+P+ T+ LI+GH+S+ N KEA + M +G
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364
Query: 482 VPDDA 486
P +
Sbjct: 365 TPSEV 369
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%)
Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
C + Y+ ++ R M+ ++ ++F M G P YT ++ K G
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGY 320
+ M ++ I PD+ T+N LI+ C G EK++ L M +P ++Y +++ Y
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
C G A L M KG+ + + N +I CRS +K L M + P+
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
++YNTLINGF E + A L+++M + GL P+ +T+N ++ G +G ++ + +
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
M KGL P +Y L++G A F+ M + G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%)
Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
R + N Y ILI Y G + ++ ++ M G P++ +CN I+ +SG+
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176
Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
FL +M+ + PD ++N LIN E + +K+ L+ KME G P ++TYN +L
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
+C++GR + +L M KG++ D TY LI+ N + + + +M +R P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296
Query: 484 DDA 486
++
Sbjct: 297 NEV 299
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 262/484 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+N C+ K+ A + ++ + G PDTV +NTL+N C E + EA +L++ M G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP + T N+L+NGLC G+ A ++D M++ G P+ TY +L C+ + A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+ +M R + D V +S +I ++G LD A F EM+ G D + Y +I G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G + K+ +M+++ +VVT++ +++ + L EAD L EM++RG+ P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ +LI G CK+ + +A+ + D+M K PDI+T+N LI+G+CK ++ +L+ +
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + N ++Y L+ G+C G + A +L+ EMV + ++P +VS ++ G C +G+
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
KA E K+ ++ D Y +I+G +D A+ L + +G+ D YN+
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+++ CR+ + ++++ +M E+G PD TY LI H+ ++ A +EM G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 481 FVPD 484
F D
Sbjct: 609 FPAD 612
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 234/422 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+VN LC + K+ A + + M + G P+ VTY ++N C+ G A +L+ M +
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+K Y+ +I+GLCK G D A + +EM G D TYNTL+ C +
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ +M +R ++P++V+FS LI F + G+L A +EM G+ P+ + Y +I+G+
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ + EA++M D M+ KGC D++T+N ++NG C+A + + +LF EM RGV +
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TL+ G C+ G + A LF M + ++PDIV+Y L+DG C GE+EKA +++
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ K+ + Y I+I+G C+ V +A+ L+ + KG+K + N +I CR
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
SKAD KM EG PD ++YN LI + +++ A L+ +M++ G DV T +
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Query: 421 IL 422
++
Sbjct: 619 VI 620
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 244/461 (52%)
Query: 10 KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
K D A +M Q P + +N L +A + E L M KG+ ++T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 70 SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
+IN C+ + A + +++++G PDT +NTLL C + +SEA E+ M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
G P +++ +TL+ NG++ A++ M G P+ V Y ++N C++G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
+++ +M E+ +D V Y+ I++GLC+ L A +LFNEM +G D T+ TLI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
C G + L M ++ I P++VT++ LID F K G++ +A++L +M+ R I+PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
I+Y LI+G+C + EA ++ M+ KG P +++ N +I GYC++ E
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
+M GV ++++YNTL+ GF + ++ A L +M ++ + PD+++Y ++L G C G
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAF 470
+ + I ++ + + D Y +I+G + + + +A+
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 224/400 (56%), Gaps = 1/400 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N +CK + A L +ME++ + D V Y+ +I+ C++G L+ AF L N M KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
K + TYN+LI G C GR D ++L +M++ +SP+ T++ L+ ++ + EA+
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ EM +RG+AP+ +++++LI F + +L+ A+ M S G PD + + I+INGY
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ + + L++ EM +G + + VTYNT++ G C++ L A LF EM+ R V PD
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
++ L+ G C +G + KAL +F + + ++ DI Y +I G C +++ A L+
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ + + + +Y I+I+ C +++A L+ +M +G P ++ N +I+ + D
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
A+ A E + +M S G D + +IN E +DK+F
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE-LDKSF 632
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%)
Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
+A L+ +M+ PT++ N + ++ +M S+G+ + + +I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
N F R + AF+ + K+ G PD + +N +L G C + R+ ++ ++ RM+E G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
P T TL+NG + +A D M++ GF P++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 268/486 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K +K D +M+ G+ + TY+ LIN +CR L A ++ M G
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T +SL+NG C R A ++D+M G P+T T+NTL+ SEA
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M +G PD+V++ ++ + G D A +M+ L P ++Y II+G
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ + +AL + EM KG +VVTY+++++ LC ++A L ++M+ER + PD
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+TF+ LI K+G + +A L+D M ++SI P IVTY++LI+GFC +++A +++
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S+ P+ ++Y LI G+C V E ++ EM +G+ V+ N +I+G ++GD
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A E +MVS+GV P+ ++YNTL++G + ++KA + ++ + P + TYN+
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C+ G++ D + + KG+ PD Y T+I+G + + +EA EM + G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 481 FVPDDA 486
+P+
Sbjct: 567 TLPNSG 572
Score = 284 bits (727), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 240/436 (55%), Gaps = 1/436 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ L +K A + M KG PD VTY ++N C+ G + AF L+N M
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L+PGV YN++I+GLCK D A + EM G+ P+ TY++L+ C S+A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M R + PD+ +FS LI F + G+L A + EM + P V Y+ +ING+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C + + EA +M + M+ K C DVVTYNT++ G C+ K + E ++F EM +RG+ +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ LI G + G+ + A +F M + P+I+TYNTL+DG CK G++EKA ++
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ K+ P +Y I+I G C G V + + L+ + KG+KP +V+ NT+I G+CR G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+AD +M +G P+S YNTLI +R+ + + + L+ +M + G D T +
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611
Query: 421 ILTGFCRQGRMHDSEL 436
+ T GR+ S L
Sbjct: 612 V-TNMLHDGRLDKSFL 626
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 260/484 (53%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C+ ++ A L +M + G P+ VT ++L+N YC + EA L++ M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P T+N+LI+GL + A ++D M+ G PD TY ++ C++ + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M + + P ++ ++T+I + +D AL F+EM++ G+ P+ V Y+ +I+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G +A ++ +M+E+ DV T++ +++ + L EA+ L++EM++R + P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+++LI+G C +++A +F+ M K PD+VTYNTLI GFCK +E+ +++ +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + N ++Y ILI G G A ++ EMV G+ P +++ NT++ G C++G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
KA + ++P +YN +I G + ++ + L + +G+ PDV+ YN
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+++GFCR+G +++ + M E G P+ Y TLI + + + + EM G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 481 FVPD 484
F D
Sbjct: 602 FAGD 605
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 296 bits (758), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 271/503 (53%), Gaps = 22/503 (4%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCRE----------------G 44
++ C HK+ + ++ + G PD VT+NTL++ C E G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 45 FLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
FLE A L + M GL P V T+N+LINGLC +GR A ++++M+ GL D TY
Sbjct: 207 FLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
T++ C+ + A + +M + PD+V +S +I ++G A F EM
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
G+ P+ Y +I+G+C G +A ++ +M+E+ DV+T+N +++ + L EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
+ L +EML R +FPD T+ ++I+G CK + A ++FD+M PD+VT+NT+ID
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441
Query: 285 FCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPT 344
+C+ +++ +L ++ R + N +Y LI+G+C + ++ A L+ EM+ G+ P
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
++CN ++ G+C + +A E + +D D+++YN +I+G + +D+A+ L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
+ G+ PDV TYNV+++GFC + + D+ ++ +M + G PD STY TLI G +
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 465 NLKEAFRFHDEMLQRGFVPDDAF 487
+ ++ EM GF DAF
Sbjct: 622 EIDKSIELISEMRSNGF-SGDAF 643
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 237/434 (54%), Gaps = 5/434 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N LC + ++ A + +M KG++ D VTY T++N C+ G + A L++ M
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+KP V Y+++I+ LCK G A+ + EML+ G++P+ TYN ++ C S+A+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M R + PD+++F+ LI + G+L A EM + PD V Y +I G+
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C++ +A M D M DVVT+NTI++ CRAK + E L E+ RG+ +
Sbjct: 412 CKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLIHG C+ N+N A +LF M + PD +T N L+ GFC+ ++E+A +L+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ KI + ++Y I+I+G C V EA+ L+ + G++P + + N +I G+C
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
S A+ KM G +PD+ +YNTLI G ++ +DK+ L+S+M + G D T +
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Query: 421 ILTGFCRQGRMHDS 434
+ GR+ S
Sbjct: 648 V-ADLITDGRLDKS 660
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 260/501 (51%), Gaps = 19/501 (3%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ + ++ D A +ME + + + ++N LI +C L + ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 61 LKPGVFTYNSLINGLCKKGRCDRA---------------KEVLDEMLQMGLSPDTATYNT 105
+P V T+N+L++GLC + R A + D+M+++GL+P T+NT
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
L+ C + + EA + +M +G+ D+V++ T++ + G AL +M+
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
+ PD V+Y+ II+ C++G +A + EMLEKG +V TYN +++G C ++A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
L +M+ER + PD TF LI K+G + +A L D M + I PD VTYN++I GF
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
CK + A ++ D+++ SP+ +++ +I+ YC V E +L E+ +G+
Sbjct: 412 CKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
+ NT+I G+C + + A + +M+S GV PD+I+ N L+ GF E +++A L
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
++ + D + YN+I+ G C+ ++ ++ + + G+ PD TY +I+G ++
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 466 LKEAFRFHDEMLQRGFVPDDA 486
+ +A +M G PD++
Sbjct: 588 ISDANVLFHKMKDNGHEPDNS 608
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 231/433 (53%), Gaps = 4/433 (0%)
Query: 20 EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
+M + G+ P +T+NTLIN C EG + EA L+N M GKGL V TY +++NG+CK G
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 80 RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
A +L +M + + PD Y+ ++ C+ + S+A+ +F EM +G+AP++ +++
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
+I F G+ A R+M + PD + + +I+ + G + EA K+ DEML +
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
D VTYN+++ G C+ +A +F+ M PD TF T+I +C+ +++
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEG 451
Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
+ L ++++ + + TYNTLI GFC+V + A L+ +MIS + P+ I+ IL+ G
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
+C + EA L+ + I V+ N II G C+ +A + + GV+PD
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
+YN +I+GF + + A L KM++ G PD TYN ++ G + G + S ++
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 440 RMIEKGLNPDRST 452
M G + D T
Sbjct: 632 EMRSNGFSGDAFT 644
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 229/462 (49%), Gaps = 24/462 (5%)
Query: 11 IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
+D A F M + + V N +I + R + A L M + + ++++N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 71 LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
LI C + + ++ ++G PD T+NTLL C ++ +SEA +F M G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
A+ F +M GL P + + +ING C G VLEA
Sbjct: 207 FL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
+ ++M+ KG +DVVTY TI+NG+C+ A +L ++M E + PD ++ +I
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
CKDG+ + A LF M +K I P++ TYN +IDGFC G A +L DMI R+I+P+
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
+++ LI+ G + EA +L EM+ + I P V+ N++I G+C+ A
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
M S PD +++NT+I+ + R + +D+ L+ ++ +GLV + TYN ++ GFC
Sbjct: 427 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRF 472
++ ++ + MI G+ PD T L+ G L+EA
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 167/303 (55%), Gaps = 8/303 (2%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A K+ K+ A+ EM + ++PDTVTYN++I +C+ ++A + + M+
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P V T+N++I+ C+ R D ++L E+ + GL +T TYNTL+ C +N++ A+
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++F EM GV PD ++ + L+ F N +L+ AL F ++ + + D V Y III+G
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ V EA + + G DV TYN +++G C +++A+ LF++M + G PD
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLI G K G ++K++ L M D T + D G ++K+ ++D
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS---FSD 663
Query: 301 MIS 303
M+S
Sbjct: 664 MLS 666
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/484 (31%), Positives = 269/484 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K +K + +M+ G+ D TY+ IN +CR L A ++ M G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T +SL+NG C R A ++D+M++MG PDT T+ TL+ SEA
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M +RG PD+V++ T++ + G +D AL ++M+ + D V+Y II+G
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ + +AL + EM KG DV TY+++++ LC ++A L ++M+ER + P+
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF+ LI K+G + +A L+D M ++SI PDI TY++LI+GFC +++A ++
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
MIS+ PN ++Y LI G+C V E L+ EM +G+ V+ T+I G+ ++ D
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A +MVS GV P+ ++YN L++G + + KA + ++ + PD+ TYN+
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C+ G++ D + + KG++P+ Y T+I+G + + +EA +M + G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 481 FVPD 484
+P+
Sbjct: 569 PLPN 572
Score = 287 bits (734), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 269/483 (55%)
Query: 2 VNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGL 61
+N C+ ++ A L +M + G PD VT ++L+N YC + +A L++ M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 62 KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEE 121
KP FT+ +LI+GL + A ++D+M+Q G PD TY T++ C++ ++ A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 122 IFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
+ +M + + D+V ++T+I + +D AL F EM + G+ PD Y+ +I+ C
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 182 RNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFY 241
G +A ++ +M+E+ +VVT++ +++ + L EA+ L++EM++R + PD +
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 242 TFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADM 301
T+++LI+G C +++A ++F++M K P++VTY+TLI GFCK +E+ +L+ +M
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 302 ISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDA 361
R + N ++Y LI+G+ A ++ +MV G+ P +++ N ++ G C++G
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 362 SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVI 421
+KA + ++PD +YN +I G + ++ + L + +G+ P+VI YN +
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 422 LTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
++GFCR+G +++ +L +M E G P+ TY TLI + + + + EM GF
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Query: 482 VPD 484
D
Sbjct: 605 AGD 607
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 264/484 (54%), Gaps = 4/484 (0%)
Query: 3 NALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
N L K+D A +M + +P V +N L++A + E L M G+
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 63 PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
++TY+ IN C++ + A VL +M+++G PD T ++LL C + +S+A +
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 123 FCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYC 181
+M G PD +F+TLI G+F N + A+ +M G PD V Y ++NG C
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHN-KASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 182 RNGFVLEALKMRDEMLEKGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G + AL + +M EKG + DVV YNTI++GLC+ K + +A +LF EM +G+ PD
Sbjct: 235 KRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+++LI C G + A L M ++ I P++VT++ LID F K G++ +A KL+ +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
MI R I P+ +Y LING+C + EA ++ M+ K P +V+ +T+IKG+C++
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+ E +M G+ ++++Y TLI+GF + + D A + +M + G+ P+++TYN+
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+L G C+ G++ + ++ + + PD TY +I G +++ + + +G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 481 FVPD 484
P+
Sbjct: 534 VSPN 537
Score = 278 bits (711), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 242/436 (55%), Gaps = 1/436 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ L +K A + +M Q+G PD VTY T++N C+ G ++ A L+ M
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
++ V YN++I+GLCK D A + EM G+ PD TY++L+ C S+A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M R + P++V+FS LI F + G+L A + EM + PD Y+ +ING+
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C + + EA M + M+ K C +VVTY+T++ G C+AK + E +LF EM +RG+ +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+TTLIHG + + + A +F M + P+I+TYN L+DG CK G++ KA ++
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ + P+ +Y I+I G C G V + + L+ + KG+ P +++ NT+I G+CR G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+AD L KM +G P+S +YNTLI +R+ + + + L+ +M + G D T +
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613
Query: 421 ILTGFCRQGRMHDSEL 436
+ T GR+ S L
Sbjct: 614 V-TNMLHDGRLDKSFL 628
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 252/458 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C +I A + +M + G PDT T+ TLI+ EA L++ M +G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + TY +++NGLCK+G D A +L +M + + D YNT++ C+ ++M +A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+F EM +G+ PD+ ++S+LI G+ A +M + P+ V ++ +I+ +
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G ++EA K+ DEM+++ D+ TY++++NG C L EA +F M+ + FP+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T++TLI G CK + + + LF M+Q+ + + VTY TLI GF + + + A ++
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S + PN ++Y IL++G C G + +A ++ + ++P + + N +I+G C++G
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
E + +GV P+ I+YNT+I+GF R+ + ++A +L+ KM+ G +P+ TYN
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
++ R G S ++ M G D ST + N
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%)
Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
IL N + V +A L+ +MV P++V N ++ + +M +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
G+ D +Y+ IN F R + A A+++KM G PD++T + +L G+C R+ D+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
++ +M+E G PD T+TTLI+G N EA D+M+QRG PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 266/484 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K +K D +M+ G+ + TY+ LIN +CR L A ++ M G
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T NSL+NG C R A ++ +M++MG PD+ T+NTL+ R SEA
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M +G PD+V++ ++ + G +D AL ++M+ + P V+Y II+
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C V +AL + EM KG +VVTYN+++ LC ++A L ++M+ER + P+
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF+ LI K+G + +A L+D M ++SI PDI TY++LI+GFC +++A ++
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
MIS+ PN ++Y LI G+C V E L+ EM +G+ V+ T+I G+ ++ +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A +MVS+GV PD ++Y+ L++G ++ A + ++ + PD+ TYN+
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C+ G++ D + + KG+ P+ TYTT+++G + +EA EM + G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 481 FVPD 484
+PD
Sbjct: 567 PLPD 570
Score = 275 bits (703), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 262/484 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C+ ++ A L +M + G PD VT N+L+N +C + +A L+ M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P FT+N+LI+GL + R A ++D M+ G PD TY ++ C++ ++ A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M + + P +V ++T+I ++ AL F EM + G+ P+ V Y +I
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G +A ++ +M+E+ +VVT++ +++ + L EA+ L++EM++R + PD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+++LI+G C +++A ++F++M K P++VTYNTLI GFCK +++ +L+ +
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + N ++Y LI+G+ A ++ +MV G+ P +++ + ++ G C +G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A + ++PD +YN +I G + ++ + L + +G+ P+V+TY
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+++GFCR+G +++ + M E+G PD TY TLI H+ + + EM
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Query: 481 FVPD 484
FV D
Sbjct: 602 FVGD 605
Score = 272 bits (696), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 252/477 (52%)
Query: 8 DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
D K+D A +M + +P V ++ L++A + + L M G+ ++T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 68 YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
Y+ LIN C++ + A VL +M+++G PD T N+LL C +S+A + +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
G PD +F+TLI R+ + A+ M G PD V Y I++NG C+ G +
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
AL + +M + VV YNTI++ LC K + +A +LF EM +G+ P+ T+ +LI
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
C G + A L M ++ I P++VT++ LID F K G++ +A KL+ +MI R I
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
P+ +Y LING+C + EA ++ M+ K P +V+ NT+IKG+C++ + E
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
+M G+ ++++Y TLI+GF + D A + +M + G++PD++TY+++L G C
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
G++ + ++ + + PD TY +I G +++ + + +G P+
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 237/436 (54%), Gaps = 1/436 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ L + ++ A + M KG PD VTY ++N C+ G ++ A L+ M
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
++PGV YN++I+ LC + A + EM G+ P+ TYN+L+ C S+A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M R + P++V+FS LI F + G+L A + EM + PD Y+ +ING+
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C + + EA M + M+ K C +VVTYNT++ G C+AK + E +LF EM +RG+ +
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+TTLIHG + + A +F M + PDI+TY+ L+DG C G++E A ++
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ K+ P+ +Y I+I G C G V + + L+ + KG+KP +V+ T++ G+CR G
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+AD +M EG PDS +YNTLI +R+ + + L+ +M + V D T +
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGL 611
Query: 421 ILTGFCRQGRMHDSEL 436
+ T GR+ S L
Sbjct: 612 V-TNMLHDGRLDKSFL 626
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 206/380 (54%)
Query: 103 YNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK 162
Y + + + +A +F +M + P IV FS L+ ++ + D + +M+
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 163 SAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLT 222
+ G+ + Y+I+IN +CR + AL + +M++ G D+VT N++LNG C ++
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 223 EADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLI 282
+A L +M+E G PD +TF TLIHG + ++A+ L D M K +PD+VTY ++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 283 DGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK 342
+G CK G+++ A L M KI P + Y +I+ C+ +V +A L+ EM KGI+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 343 PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
P +V+ N++I+ C G S A LS M+ ++P+ ++++ LI+ FV+E + +A L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 403 VSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
+M + + PD+ TY+ ++ GFC R+ +++ + MI K P+ TY TLI G
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 463 QNNLKEAFRFHDEMLQRGFV 482
+ E EM QRG V
Sbjct: 409 AKRVDEGMELFREMSQRGLV 428
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 2/245 (0%)
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
Y + + D ++ A+NLF M + P IV ++ L+ K+ + + L
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M + IS N +Y ILIN +C ++ A + +M+ G +P +V+ N+++ G+C
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
S A + +MV G PDS ++NTLI+G R +A ALV +M +G PD++TY +
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 421 ILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
++ G C++G + D L L + +E+G + P Y T+I+ + N+ +A EM +
Sbjct: 227 VVNGLCKRGDI-DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 480 GFVPD 484
G P+
Sbjct: 286 GIRPN 290
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 292 bits (747), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 269/486 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K K D +M++ G+ + TYN LIN +CR + A L+ M G
Sbjct: 91 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T +SL+NG C R A ++D+M++MG PDT T+ TL+ SEA
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M +RG P++V++ ++ + G +D A +M++A + + V+Y+ +I+
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ +AL + EM KG +V+TY+++++ LC + ++A L ++M+ER + P+
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF LI K+G + +A L+D M ++SI PDI TY++LI+GFC +++A ++
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
MIS+ PN ++Y LING+C + E L+ EM +G+ V+ T+I G+ ++ D
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A +MVS+GV P+ ++YNTL++G + ++KA + ++ + P + TYN+
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C+ G++ D + + KG+ PD Y T+I+G + +EA +M + G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 481 FVPDDA 486
+PD
Sbjct: 571 PLPDSG 576
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 251/452 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C+ +I A L +M + G P VT ++L+N YC + +A L++ M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P T+ +LI+GL + A ++D M+Q G P+ TY ++ C++ ++ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M + ++V +ST+I + D AL F EM++ G+ P+ + Y+ +I+
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C +A ++ +M+E+ +VVT+N +++ + L EA+ L++EM++R + PD
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+++LI+G C +++A ++F++M K P++VTYNTLI+GFCK +++ +L+ +
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + N ++Y LI+G+ A ++ +MV G+ P +++ NT++ G C++G
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
KA + ++P +YN +I G + ++ + L + +G+ PDVI YN
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
+++GFCR+G +++ + +M E G PD T
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 254 bits (650), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 249/476 (52%), Gaps = 2/476 (0%)
Query: 10 KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
K+D A M + P +N L++A + + L M G+ ++TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 70 SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
LIN C++ + A +L +M+++G P T ++LL C + +S+A + +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 130 GVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
G PD ++F+TLI G+F N + A+ M G P+ V Y +++NG C+ G +
Sbjct: 185 GYRPDTITFTTLIHGLFLHN-KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIH 248
A + ++M +VV Y+T+++ LC+ + +A +LF EM +GV P+ T+++LI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
C + A L M ++ I P++VT+N LID F K G++ +A KL+ +MI R I P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
+ +Y LING+C + EA ++ M+ K P +V+ NT+I G+C++ + E
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
+M G+ ++++Y TLI+GF + + D A + +M + G+ P+++TYN +L G C+
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
G++ + ++ + + P TY +I G +++ + + +G PD
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 222/427 (51%)
Query: 58 GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
G+ G Y ++ + D A + M++ P +N LL + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
+ +M R G++ ++ +++ LI F R Q+ AL +M G P V + ++
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
NGYC + +A+ + D+M+E G D +T+ T+++GL +EA L + M++RG
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
P+ T+ +++G CK G+++ A NL + M I+ ++V Y+T+ID CK + A L
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
+ +M ++ + PN I+Y LI+ C+ ++A RL +M+ + I P +V+ N +I + +
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
G +A++ +M+ +DPD +Y++LINGF + +D+A + M ++ P+V+T
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
YN ++ GFC+ R+ + + M ++GL + TYTTLI+G + A +M+
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 478 QRGFVPD 484
G P+
Sbjct: 463 SDGVHPN 469
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 268/488 (54%), Gaps = 1/488 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ K K D K F +M G P TYN +I+ C+EG +E A L M +G
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L P TYNS+I+G K GR D +EM M PD TYN L+ C+ +
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E + EM G+ P++VS+STL+ F + G + +A+ ++ +M+ GLVP+ YT +I+
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ G + +A ++ +EML+ G +VVTY +++GLC A+ + EA++LF +M GV P+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
++ LIHG K NM++AL L + + + IKPD++ Y T I G C + ++E A + +
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M I N + Y L++ Y G+ TE L EM I+ T+V+ +I G C++
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
SKA ++ +++ ++ G+ ++ + +I+G ++ ++ A L +M +GLVPD Y
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
++ G +QG + ++ + +M E G+ D YT+L+ G N L++A F +EM+
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 480 GFVPDDAF 487
G PD+
Sbjct: 713 GIHPDEVL 720
Score = 245 bits (626), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 248/493 (50%), Gaps = 36/493 (7%)
Query: 28 PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
P ++ L + G LEEA Q + M + P + N L++ K G+ D K
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 88 LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
+M+ G P TYN ++ C++ ++ A +F EM RG+ PD V+++++I F +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
G+LD + +F EMK PD + Y +IN +C+ G + L+ EM G +VV+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
Y+T+++ C+ M+ +A + +M G+ P+ YT+T+LI +CK GN++ A L + M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
Q ++ ++VTY LIDG C M++A +L+ M + + PN SY LI+G+ ++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
A L E+ G+GIKP L+ T I G C A +++M G+ +S+ Y TL+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ------------------- 428
+ + + N + L+ +M+ + V+T+ V++ G C+
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 429 ------------GRMHDSEL-----ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFR 471
G D+++ + +M++KGL PDR+ YT+L++G+ Q N+ EA
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 472 FHDEMLQRGFVPD 484
D+M + G D
Sbjct: 670 LRDKMAEIGMKLD 682
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 220/416 (52%), Gaps = 2/416 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N CK K+ F EM+ G+ P+ V+Y+TL++A+C+EG +++A + M G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L P +TY SLI+ CK G A + +EMLQ+G+ + TY L+ C E M EAE
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+F +M GV P++ S++ LI F + +DRAL E+K G+ PD +LY I G
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C + A + +EM E G + + Y T+++ ++ TE L +EM E +
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 577
Query: 241 YTFTTLIHGHCKDGNMNKALNLFD-IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
TF LI G CK+ ++KA++ F+ I ++ + + +IDG CK ++E A L+
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
M+ + + P+ +Y L++G G+V EA L +M G+K L++ +++ G
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 697
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK-MENQGLVPD 414
KA FL +M+ EG+ PD + +++ +D+A L S M++Q L D
Sbjct: 698 QLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSD 753
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 189/385 (49%), Gaps = 35/385 (9%)
Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
+R P F L + G L+ A+ F +MK + P +++ + + G
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243
Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
+ + +M+ G V TYN +++ +C+ + A LF EM RG+ PD T+ ++
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN--------------------------- 279
I G K G ++ + F+ M +PD++TYN
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 280 --------TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFR 331
TL+D FCK G M++A K + DM + PN +Y LI+ C +G++++AFR
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 332 LWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFV 391
L EM+ G++ +V+ +I G C + +A+E KM + GV P+ SYN LI+GFV
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 392 REENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRS 451
+ +NMD+A L+++++ +G+ PD++ Y + G C ++ +++++ M E G+ +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 452 TYTTLINGHVSQNNLKEAFRFHDEM 476
YTTL++ + N E DEM
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 35/319 (10%)
Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
CV ++ + + L ML EA F++M VFP + L+H K G +
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI-------------- 306
F M +P + TYN +ID CK G++E A L+ +M R +
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 307 ---------------------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
P+ I+Y LIN +C G + + EM G G+KP +
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
VS +T++ +C+ G +A +F M G+ P+ +Y +LI+ + N+ AF L ++
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
M G+ +V+TY ++ G C RM ++E + +M G+ P+ ++Y LI+G V N
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 466 LKEAFRFHDEMLQRGFVPD 484
+ A +E+ RG PD
Sbjct: 488 MDRALELLNELKGRGIKPD 506
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 120/227 (52%), Gaps = 2/227 (0%)
Query: 261 NLFDIM--TQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
++FD++ T+ P ++ L +G +E+A + ++ M ++ P S L++
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
+ +G + R + +M+G G +PT+ + N +I C+ GD A +M G+ P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
D+++YN++I+GF + +D +M++ PDVITYN ++ FC+ G++
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 355
Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
M GL P+ +Y+TL++ + +++A +F+ +M + G VP++
Sbjct: 356 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 57/225 (25%)
Query: 317 INGYCSMGHVTEAFRLWY-------EMV---------------------GKGIKPTLVS- 347
+ YC + H+ R++Y EMV G G+ L S
Sbjct: 142 VESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSV 201
Query: 348 ----------------------------CNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
CN ++ + + G F M+ G P
Sbjct: 202 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261
Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
+YN +I+ +E +++ A L +M+ +GLVPD +TYN ++ GF + GR+ D+
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
M + PD TY LIN L F+ EM G P+
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 288 bits (737), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 267/490 (54%), Gaps = 8/490 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ +LC+ + AK + ME G + V YN LI+ C++ + EA + ++GK
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKE-NMSEA 119
LKP V TY +L+ GLCK + E++DEML + SP A ++L VE RK + EA
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL-VEGLRKRGKIEEA 351
Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
+ + GV+P++ ++ LI + + A + F M GL P++V Y+I+I+
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
+CR G + AL EM++ G + V YN+++NG C+ ++ A+ EM+ + + P
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
T+T+L+ G+C G +NKAL L+ MT K I P I T+ TL+ G + G + A KL+
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
+M + PN ++Y ++I GYC G +++AF EM KGI P S +I G C +G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
AS+A F+ + + + I Y L++GF RE +++A ++ +M +G+ D++ Y
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 420 VILTGFCRQGRMHDSEL---ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
V++ G + D +L +L M ++GL PD YT++I+ + KEAF D M
Sbjct: 652 VLIDGSLKH---KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 477 LQRGFVPDDA 486
+ G VP++
Sbjct: 709 INEGCVPNEV 718
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 269/521 (51%), Gaps = 37/521 (7%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++++LCK K A++ M + G+ P+ VTY+ LI+ +CR G L+ A + M G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
LK V+ YNSLING CK G A+ + EM+ L P TY +L+ C K +++A
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ EM+ +G+AP I +F+TL+ R G + A+ F EM + P+ V Y ++I GY
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G + +A + EM EKG V D +Y +++GLC +EA + + + +
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T L+HG C++G + +AL++ M Q+ + D+V Y LIDG K + + L +
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + P+ + Y +I+ G EAF +W M+ +G P V+ +I G C++G
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 361 ASKADEFLSKM-----------------------------------VSEGVDPDSISYNT 385
++A+ SKM + +G+ ++ +YN
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW-RMIEK 444
LI GF R+ +++A L+++M G+ PD ITY ++ CR+ + + + LW M EK
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA-IELWNSMTEK 851
Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
G+ PDR Y TLI+G + +A +EML++G +P++
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 251/469 (53%), Gaps = 8/469 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N CK I +A+ F+ EM K + P VTY +L+ YC +G + +A +L + M+GKG
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P ++T+ +L++GL + G A ++ +EM + + P+ TYN ++ C + +MS+A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E EM+ +G+ PD S+ LI GQ A ++ + + + YT +++G+
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
CR G + EAL + EM+++G +D+V Y +++G + K L EM +RG+ PD
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T++I K G+ +A ++D+M + P+ VTY +I+G CK G + +A L +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 301 MISRKISPNYISYG----ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
M PN ++YG IL G M E + + KG+ + N +I+G+C
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE----LHNAILKGLLANTATYNMLIRGFC 798
Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
R G +A E +++M+ +GV PD I+Y T+IN R ++ KA L + M +G+ PD +
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
YN ++ G C G M + + M+ +GL P+ T T + S +
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907
Score = 265 bits (676), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 169/590 (28%), Positives = 279/590 (47%), Gaps = 107/590 (18%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCR------------------ 42
+++ LCK K+ A ++ K + PD VTY TL+ C+
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR 327
Query: 43 -----------------EGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAK 85
G +EEA L+ + G+ P +F YN+LI+ LCK + A+
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 86 EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
+ D M ++GL P+ TY+ L+ CR+ + A EM G+ + +++LI
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
+ G + A + EM + L P V YT ++ GYC G + +AL++ EM KG +
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDI 265
T+ T+L+GL RA ++ +A LFNEM E V P+ T+ +I G+C++G+M+KA
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 266 MTQKSIKPDIVTYNTLI-----------------------------------DGFCKVGE 290
MT+K I PD +Y LI GFC+ G+
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 291 MEKANKLWADMISRKISPNYISYGILING----------------------------YCS 322
+E+A + +M+ R + + + YG+LI+G Y S
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 323 M-------GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
M G EAF +W M+ +G P V+ +I G C++G ++A+ SKM
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 376 VDPDSISYNTLINGFVREE-NMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
P+ ++Y ++ + E +M KA L + + +GL+ + TYN+++ GFCRQGR+ ++
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEA 806
Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
++ RMI G++PD TYTT+IN +N++K+A + M ++G PD
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Score = 261 bits (667), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 255/512 (49%), Gaps = 35/512 (6%)
Query: 11 IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
+D +F + + + P+ T + L++ + A +L N M G++P V+ Y
Sbjct: 173 LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 232
Query: 71 LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
+I LC+ RAKE++ M G + YN L+ C+K+ + EA I +++ +
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
+ PD+V++ TL+ + + + L EM P + ++ G + G + EAL
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
+ +++ G ++ YN +++ LC+ + EA+ LF+ M + G+ P+ T++ LI
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
C+ G ++ AL+ M +K + YN+LI+G CK G++ A A+MI++K+ P
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
++Y L+ GYCS G + +A RL++EM GKGI P++ + T++ G R+G A + ++
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV--------------- 415
M V P+ ++YN +I G+ E +M KAF + +M +G+VPD
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 416 --------------------ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTT 455
I Y +L GFCR+G++ ++ + M+++G++ D Y
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 456 LINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
LI+G + + K F EM RG PDD
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 218/409 (53%), Gaps = 7/409 (1%)
Query: 83 RAKEVLDEML-------QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDI 135
R++ VLD +L ++ L P+ T + LL + + A E+F +M G+ PD+
Sbjct: 168 RSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV 227
Query: 136 VSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDE 195
++ +I L RA M++ G + V Y ++I+G C+ V EA+ ++ +
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287
Query: 196 MLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGN 255
+ K DVVTY T++ GLC+ + ++ +EML P ++L+ G K G
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 256 MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGI 315
+ +ALNL + + P++ YN LID CK + +A L+ M + PN ++Y I
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 316 LINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEG 375
LI+ +C G + A EMV G+K ++ N++I G+C+ GD S A+ F+++M+++
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 376 VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSE 435
++P ++Y +L+ G+ + ++KA L +M +G+ P + T+ +L+G R G + D+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 436 LILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+ M E + P+R TY +I G+ + ++ +AF F EM ++G VPD
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 39/298 (13%)
Query: 223 EADDLFNEML---ERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM-TQKSIKPDIVTY 278
+ D+FN + E+ +F LI + + + + +F +M T+ S+ P++ T
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195
Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
+ L+ G K A +L+ DM+S I P+ Y +I C + ++ A + M
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE---- 394
G +V N +I G C+ +A + + + PD ++Y TL+ G + +
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 395 -------------------------------NMDKAFALVSKMENQGLVPDVITYNVILT 423
+++A LV ++ + G+ P++ YN ++
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGF 481
C+ + H++EL+ RM + GL P+ TY+ LI+ + L A F EM+ G
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 313 YGILINGYCSMGHVTEAFRLWYEMVGK-GIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
+ +LI Y V + ++ M+ K + P + + + ++ G + A E + M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
VS G+ PD Y +I +++ +A +++ ME G +++ YNV++ G C++ ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
++ I + K L PD TY TL+ G + DEML F P +A
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 252/483 (52%), Gaps = 1/483 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
MVN CK ++ A ++ ++ + G+ PD TY +LI YC+ L+ AF++ N M KG
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ Y LI+GLC R D A ++ +M P TY L+ C E SEA
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ EM G+ P+I +++ LI + ++A +M GL+P+ + Y +INGY
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ G + +A+ + + M + + TYN ++ G C++ + +A + N+MLER V PD
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDV 462
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ +LI G C+ GN + A L +M + + PD TY ++ID CK +E+A L+
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ + ++PN + Y LI+GYC G V EA + +M+ K P ++ N +I G C G
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+A KMV G+ P + LI+ +++ + D A++ +M + G PD TY
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+ +CR+GR+ D+E ++ +M E G++PD TY++LI G+ AF M G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 481 FVP 483
P
Sbjct: 703 CEP 705
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 156/504 (30%), Positives = 257/504 (50%), Gaps = 20/504 (3%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++++LC K + A+ L +M +KG+ P+ +TYN LIN YC+ G +E+A ++ M +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L P TYN LI G CK +A VL++ML+ + PD TYN+L+ CR N A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M+ RG+ PD +++++I ++ +++ A F ++ G+ P+ V+YT +I+GY
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ G V EA M ++ML K C+ + +T+N +++GLC L EA L +M++ G+ P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T T LIH KDG+ + A + F M KPD TY T I +C+ G + A + A
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKG------ 354
M +SP+ +Y LI GY +G AF + M G +P+ + ++IK
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722
Query: 355 ---------YCRSGDASKAD---EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFAL 402
C + + D E L KMV V P++ SY LI G N+ A +
Sbjct: 723 GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKV 782
Query: 403 VSKME-NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
M+ N+G+ P + +N +L+ C+ + +++ ++ MI G P + LI G
Sbjct: 783 FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842
Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
+ + +LQ G+ D+
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDE 866
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 233/448 (52%), Gaps = 26/448 (5%)
Query: 62 KPGVFTYNSLINGLCKKG--------------RCDRAKEVL-----------DEMLQMGL 96
K V++Y SL+ L G CD + L DE ++
Sbjct: 120 KHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKY 179
Query: 97 SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
YNTLL R + E ++++ EM V P+I +++ ++ + + G ++ A
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239
Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
Y ++ AGL PD YT +I GYC+ + A K+ +EM KGC + V Y +++GLC
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
A+ + EA DLF +M + FP T+T LI C ++ALNL M + IKP+I
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
TY LID C + EKA +L M+ + + PN I+Y LINGYC G + +A + M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
+ + P + N +IKGYC+S + KA L+KM+ V PD ++YN+LI+G R N
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
D A+ L+S M ++GLVPD TY ++ C+ R+ ++ + + +KG+NP+ YT L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 457 INGHVSQNNLKEAFRFHDEMLQRGFVPD 484
I+G+ + EA ++ML + +P+
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 220/443 (49%), Gaps = 19/443 (4%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ C+ DSA L M +G+ PD TY ++I++ C+ +EEA L +S+ KG
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P V Y +LI+G CK G+ D A +L++ML P++ T+N L+ C + EA
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M + G+ P + + + LI ++G D A F++M S+G PD YT I Y
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
CR G +L+A M +M E G D+ TY++++ G A D+ M + G P
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 241 YTFTTLI-------HGH--------CKDGNM---NKALNLFDIMTQKSIKPDIVTYNTLI 282
+TF +LI +G C NM + + L + M + S+ P+ +Y LI
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 283 DGFCKVGEMEKANKLWADMISRK-ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
G C+VG + A K++ M + ISP+ + + L++ C + EA ++ +M+ G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
P L SC +I G + G+ + ++ G D +++ +I+G ++ ++ +
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 402 LVSKMENQGLVPDVITYNVILTG 424
L + ME G TY++++ G
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/484 (31%), Positives = 264/484 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K K D +M++ G+ + TYN LIN +CR + A L+ M G
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T +SL+NG C R A ++D+M++MG PDT T+ TL+ SEA
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M +RG P++V++ ++ + G +D A +M++A + D V++ II+
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ V +AL + EM KG +VVTY+++++ LC ++A L ++M+E+ + P+
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF LI K+G +A L D M ++SI PDI TYN+LI+GFC ++KA +++
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S+ P+ +Y LI G+C V + L+ EM +G+ V+ T+I+G GD
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A + +MVS+GV PD ++Y+ L++G ++KA + M+ + D+ Y
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C+ G++ D + + KG+ P+ TY T+I+G S+ L+EA+ +M + G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 481 FVPD 484
+PD
Sbjct: 496 PLPD 499
Score = 268 bits (686), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 255/484 (52%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C+ +I A L +M + G P VT ++L+N YC + +A L++ M G
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P T+ +LI+GL + A ++D M+Q G P+ TY ++ C++ ++ A
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M + D+V F+T+I + +D AL F+EM++ G+ P+ V Y+ +I+
Sbjct: 171 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G +A ++ +M+EK ++VT+N +++ + EA+ L ++M++R + PD
Sbjct: 231 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+ +LI+G C ++KA +F+ M K PD+ TYNTLI GFCK +E +L+ +
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + + ++Y LI G G A +++ +MV G+ P +++ + ++ G C +G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
KA E M + D Y T+I G + +D + L + +G+ P+V+TYN
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+++G C + + ++ +L +M E G PD TY TLI H+ + + EM
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530
Query: 481 FVPD 484
FV D
Sbjct: 531 FVGD 534
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 149/280 (53%)
Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
+ +N +L+ + + K L +M G+ + YT+ LI+ C+ ++ AL L
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
M + +P IVT ++L++G+C + A L M+ P+ I++ LI+G
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
+EA L MV +G +P LV+ ++ G C+ GD A L+KM + ++ D + +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 385 TLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
T+I+ + ++D A L +ME +G+ P+V+TY+ +++ C GR D+ +L MIEK
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+NP+ T+ LI+ V + EA + HD+M++R PD
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 4/232 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ CK +++ EM +G+ DTVTY TLI +G + A ++ M G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P + TY+ L++GLC G+ ++A EV D M + + D Y T++ C+ + +
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++FC +S +GV P++V+++T+I L A ++MK G +PD+ Y +I +
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
R+G + ++ EM V D T + N L ++ D F +ML
Sbjct: 511 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL----DKSFLDML 558
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 285 bits (729), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/475 (32%), Positives = 258/475 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+V L + +I A L EM +KG P+ + YN LI+++ G L +A ++ + M KG
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L TYN+LI G CK G+ D A+ +L EML +G + + ++ +++ C A
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
EM R ++P +TLI ++G+ +AL + + + G V D +++G
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G + EA +++ E+L +GCVMD V+YNT+++G C K L EA +EM++RG+ PD
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
YT++ LI G + +A+ +D + + PD+ TY+ +IDG CK E+ + + +
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 648
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S+ + PN + Y LI YC G ++ A L +M KGI P + ++IKG
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+A +M EG++P+ Y LI+G+ + M K L+ +M ++ + P+ ITY V
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
++ G+ R G + ++ +L M EKG+ PD TY I G++ Q + EAF+ DE
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Score = 282 bits (721), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 257/476 (53%)
Query: 10 KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
+ D A MF +M ++G+ P +TY+ L+ R + +A+ ++ M+ KG P V YN
Sbjct: 323 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 382
Query: 70 SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
+LI+ + G ++A E+ D M+ GLS ++TYNTL+ C+ AE + EM
Sbjct: 383 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 442
Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
G + SF+++I + + D AL + EM + P L T +I+G C++G +A
Sbjct: 443 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502
Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
L++ + L KG V+D T N +L+GLC A L EA + E+L RG D ++ TLI G
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562
Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
C +++A D M ++ +KPD TY+ LI G + ++E+A + W D + P+
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622
Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
+Y ++I+G C E + EM+ K ++P V N +I+ YCRSG S A E
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682
Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
M +G+ P+S +Y +LI G +++A L +M +GL P+V Y ++ G+ + G
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742
Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
+M E +L M K ++P++ TYT +I G+ N+ EA R +EM ++G VPD
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 243/461 (52%)
Query: 24 KGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDR 83
KGV PD + T INA+C+ G +EEA +L + M G+ P V T+N++I+GL GR D
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 84 AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIG 143
A ++M++ G+ P TY+ L+ R + + +A + EM+++G P+++ ++ LI
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
F G L++A+ M S GL + Y +I GYC+NG A ++ EML G +
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446
Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
+ ++ +++ LC M A EML R + P TTLI G CK G +KAL L+
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506
Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
K D T N L+ G C+ G++++A ++ +++ R + +SY LI+G C
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566
Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
+ EAF EMV +G+KP + + +I G +A +F G+ PD +Y
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626
Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
+ +I+G + E ++ +M ++ + P+ + YN ++ +CR GR+ + + M
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686
Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
KG++P+ +TYT+LI G + ++EA +EM G P+
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 727
Score = 228 bits (581), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 234/469 (49%), Gaps = 7/469 (1%)
Query: 21 MEQKGVYPDTVTYNTLINAYCREGFLE---EAFQLMNSMSGKGLKPGVFTYNSLINGLCK 77
+ KG++P T N L+ + R + EAF ++ KG+ P V+ + + IN CK
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGVSPDVYLFTTAINAFCK 285
Query: 78 KGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVS 137
G+ + A ++ +M + G++P+ T+NT++ EA +M RG+ P +++
Sbjct: 286 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 345
Query: 138 FSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEML 197
+S L+ +R ++ A +EM G P+ ++Y +I+ + G + +A++++D M+
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405
Query: 198 EKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMN 257
KG + TYNT++ G C+ A+ L EML G + +FT++I C +
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 465
Query: 258 KALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILI 317
AL M +++ P TLI G CK G+ KA +LW +++ + + L+
Sbjct: 466 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 318 NGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVD 377
+G C G + EAFR+ E++G+G VS NT+I G C +A FL +MV G+
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 378 PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELI 437
PD+ +Y+ LI G +++A + G++PDV TY+V++ G C+ R + +
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 438 LWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
M+ K + P+ Y LI + L A ++M +G P+ A
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 285 bits (728), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 264/484 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K K D +M++ + TYN LIN +CR + A L+ M G
Sbjct: 91 LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T +SL+NG C R A ++D+M++MG PDT T+ TL+ SEA
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M +RG P++V++ ++ + G D AL +M++A + D V++ II+
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ V +AL + EM KG +VVTY+++++ LC ++A L ++M+E+ + P+
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF LI K+G +A L+D M ++SI PDI TYN+L++GFC ++KA +++
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S+ P+ ++Y LI G+C V + L+ EM +G+ V+ T+I+G GD
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A + +MVS+GV PD ++Y+ L++G ++KA + M+ + D+ Y
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C+ G++ D + + KG+ P+ TY T+I+G S+ L+EA+ +M + G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 481 FVPD 484
+P+
Sbjct: 571 PLPN 574
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 256/484 (52%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C+ +I A L +M + G P VT ++L+N YC + +A L++ M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P T+ +LI+GL + A ++D M+Q G P+ TY ++ C++ + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M + D+V F+T+I + +D AL F+EM++ G+ P+ V Y+ +I+
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G +A ++ +M+EK ++VT+N +++ + EA+ L+++M++R + PD
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+ +L++G C ++KA +F+ M K PD+VTYNTLI GFCK +E +L+ +
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R + + ++Y LI G G A +++ +MV G+ P +++ + ++ G C +G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
KA E M + D Y T+I G + +D + L + +G+ P+V+TYN
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+++G C + + ++ +L +M E G P+ TY TLI H+ + + EM
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605
Query: 481 FVPD 484
FV D
Sbjct: 606 FVGD 609
Score = 238 bits (608), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 219/427 (51%)
Query: 58 GKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS 117
G+ G Y ++ + D A + M++ P +N LL + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 118 EAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIII 177
+ +M R + + +++ LI F R Q+ AL +M G P V + ++
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 178 NGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF 237
NGYC + +A+ + D+M+E G D +T+ T+++GL +EA L + M++RG
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 238 PDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
P+ T+ +++G CK G+ + ALNL + M I+ D+V +NT+ID CK ++ A L
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
+ +M ++ I PN ++Y LI+ CS G ++A +L +M+ K I P LV+ N +I + +
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
G +A++ M+ +DPD +YN+L+NGF + +DKA + M ++ PDV+T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
YN ++ GFC+ R+ D + M +GL D TYTTLI G + A + +M+
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 478 QRGFVPD 484
G PD
Sbjct: 463 SDGVPPD 469
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 4/233 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ CK +++ EM +G+ DTVTY TLI +G + A ++ M G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P + TY+ L++GLC G+ ++A EV D M + + D Y T++ C+ + +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++FC +S +GV P++V+++T+I L A ++MK G +P++ Y +I +
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
R+G + ++ EM V D T + N L ++ D F +ML
Sbjct: 586 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL----DKSFLDMLS 634
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 282 bits (721), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 266/482 (55%)
Query: 3 NALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK 62
+A+ + + + F ++E G+ + T N +IN +CR A+ ++ + G +
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155
Query: 63 PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEI 122
P T+N+LI GL +G+ A ++D M++ G PD TYN+++ CR + S A ++
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 123 FCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCR 182
+M R V D+ ++ST+I R+G +D A+ F+EM++ G+ V Y ++ G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 183 NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYT 242
G + + +M+ + V +V+T+N +L+ + L EA++L+ EM+ RG+ P+ T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 243 FTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI 302
+ TL+ G+C +++A N+ D+M + PDIVT+ +LI G+C V ++ K++ ++
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 303 SRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDAS 362
R + N ++Y IL+ G+C G + A L+ EMV G+ P +++ ++ G C +G
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 363 KADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVIL 422
KA E + +D + Y T+I G + ++ A+ L + +G+ P+V+TY V++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 423 TGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFV 482
+G C++G + ++ ++L +M E G P+ TY TLI H+ +L + + +EM GF
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 483 PD 484
D
Sbjct: 576 AD 577
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 260/462 (56%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+N C+ K A L ++ + G PDT T+NTLI EG + EA L++ M G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P V TYNS++NG+C+ G A ++L +M + + D TY+T++ CR + A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+F EM +G+ +V++++L+ + G+ + + ++M S +VP+ + + ++++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G + EA ++ EM+ +G +++TYNT+++G C L+EA+++ + M+ PD
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TFT+LI G+C ++ + +F ++++ + + VTY+ L+ GFC+ G+++ A +L+ +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S + P+ ++YGIL++G C G + +A ++ ++ + +V TII+G C+ G
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A + +GV P+ ++Y +I+G ++ ++ +A L+ KME G P+ TYN
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVS 462
++ R G + S ++ M G + D S+ +I+ +S
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 117/232 (50%), Gaps = 4/232 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ C ++D + ++G+ + VTY+ L+ +C+ G ++ A +L M G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P V TY L++GLC G+ ++A E+ +++ + + Y T++ C+ + +A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+FC + +GV P++++++ +I + G L A + R+M+ G P++ Y +I +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEML 232
R+G + + K+ +EM G D + +++ L E D F +ML
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG----ELDKSFLDML 601
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 269/520 (51%), Gaps = 35/520 (6%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N CK ++D A MEQ+G+ PD + Y+TLI+ Y + G L +L + KG
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+K V ++S I+ K G A V ML G+SP+ TY L+ C+ + EA
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ ++ +RG+ P IV++S+LI F + G L + +M G PD V+Y ++++G
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G +L A++ +ML + ++VV +N++++G CR EA +F M G+ PD
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCK-----VG------ 289
TFTT++ +G + +AL LF M + ++PD + Y TLID FCK +G
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 290 ------------------------EMEKANKLWADMISRKISPNYISYGILINGYCSMGH 325
+E A+K + ++I K+ P+ ++Y +I GYCS+
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 326 VTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNT 385
+ EA R++ + P V+ +I C++ D A S M +G P++++Y
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711
Query: 386 LINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG 445
L++ F + +++ +F L +M+ +G+ P +++Y++I+ G C++GR+ ++ I + I+
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 446 LNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
L PD Y LI G+ L EA ++ ML+ G PDD
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 218 bits (555), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 215/422 (50%), Gaps = 37/422 (8%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ LC+D +I A ++ ++G+ P VTY++LI+ +C+ G L F L M G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P V Y L++GL K+G A +ML + + +N+L+ CR EA
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++F M G+ PD+ +F+T++ + G+L+ AL F M GL PD + Y +I+ +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 181 CRN-----GFVL------------------------------EALKMRDEMLEKGCVMDV 205
C++ G L +A K + ++E D+
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 206 VTYNTILNGLCRAKMLTEADDLFNEMLERGVF-PDFYTFTTLIHGHCKDGNMNKALNLFD 264
VTYNT++ G C + L EA+ +F E+L+ F P+ T T LIH CK+ +M+ A+ +F
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
IM +K KP+ VTY L+D F K ++E + KL+ +M + ISP+ +SY I+I+G C G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 325 HVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYN 384
V EA ++++ + + P +V+ +I+GYC+ G +A M+ GV PD +
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 815
Query: 385 TL 386
L
Sbjct: 816 AL 817
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 227/439 (51%)
Query: 46 LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
+E A +L++ + G P V T+ +LING CK+G DRA ++ M Q G+ PD Y+T
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
L+ + + ++F + +GV D+V FS+ I ++ ++G L A + ++ M G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
+ P+ V YTI+I G C++G + EA M ++L++G +VTY+++++G C+ L
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
L+ +M++ G PD + L+ G K G M A+ M +SI+ ++V +N+LIDG+
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
C++ ++A K++ M I P+ ++ ++ G + EA L++ M G++P
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
++ T+I +C+ + + M + D N +I+ + ++ A +
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
+ + PD++TYN ++ G+C R+ ++E I + P+ T T LI+ N+
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 466 LKEAFRFHDEMLQRGFVPD 484
+ A R M ++G P+
Sbjct: 687 MDGAIRMFSIMAEKGSKPN 705
Score = 191 bits (486), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 226/466 (48%), Gaps = 49/466 (10%)
Query: 67 TYNSLINGLCKKGRCDRAKEVLDEMLQ--------MG----LSPDTATYNTLLVESCRKE 114
++ ++ + L + G D A +V DEM+ +G S D L+ CR
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160
Query: 115 NMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNV-LY 173
+ +A EIF ++ GV S ++ + ++D +F ++ G+ P V +
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220
Query: 174 TIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE 233
+++ G V +AL ++E+G + +V+ N +L GL + A L + +L+
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLD 279
Query: 234 RGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEK 293
G P+ TF TLI+G CK G M++A +LF +M Q+ I+PD++ Y+TLIDG+ K G +
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 294 ANKLWAD-----------------------------------MISRKISPNYISYGILIN 318
+KL++ M+ + ISPN ++Y ILI
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
G C G + EAF ++ +++ +G++P++V+ +++I G+C+ G+ M+ G P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
D + Y L++G ++ M A KM Q + +V+ +N ++ G+CR R ++ +
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
M G+ PD +T+TT++ + + L+EA M + G PD
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 256/477 (53%), Gaps = 4/477 (0%)
Query: 12 DSAKMFLCEMEQK--GVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
DSA + L + K P+ Y ++ R G ++ +++ M + G T+
Sbjct: 63 DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFL 122
Query: 70 SLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSR 128
LI + D V+D M+ + GL PDT YN +L ++ E +MS
Sbjct: 123 ILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV 182
Query: 129 RGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE 188
G+ PD+ +F+ LI R QL A++ +M S GLVPD +T ++ GY G +
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 189 ALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLER-GVFPDFYTFTTLI 247
AL++R++M+E GC V+ N I++G C+ + +A + EM + G FPD YTF TL+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
+G CK G++ A+ + D+M Q+ PD+ TYN++I G CK+GE+++A ++ MI+R S
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
PN ++Y LI+ C V EA L + KGI P + + N++I+G C + + A E
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
+M S+G +PD +YN LI+ + +D+A ++ +ME G VITYN ++ GFC+
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+ ++E I M G++ + TY TLI+G +++A + D+M+ G PD
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/487 (31%), Positives = 251/487 (51%), Gaps = 1/487 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+N L + + ++ +M G+ PD T+N LI A CR L A ++ M G
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L P T+ +++ G ++G D A + ++M++ G S + N ++ C++ + +A
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 121 EIFCEMSRR-GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
EMS + G PD +F+TL+ + G + A+ M G PD Y +I+G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
C+ G V EA+++ D+M+ + C + VTYNT+++ LC+ + EA +L + +G+ PD
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
TF +LI G C N A+ LF+ M K +PD TYN LID C G++++A +
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
M + + I+Y LI+G+C EA ++ EM G+ V+ NT+I G C+S
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
A + + +M+ EG PD +YN+L+ F R ++ KA +V M + G PD++TY
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
+++G C+ GR+ + +L + KG+N Y +I G + EA EML++
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 480 GFVPDDA 486
P DA
Sbjct: 640 NEAPPDA 646
Score = 268 bits (685), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 262/487 (53%), Gaps = 3/487 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ ALC+ H++ A + L +M G+ PD T+ T++ Y EG L+ A ++ M G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEML-QMGLSPDTATYNTLLVESCRKENMSEA 119
+ N +++G CK+GR + A + EM Q G PD T+NTL+ C+ ++ A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
EI M + G PD+ +++++I + G++ A+ +M + P+ V Y +I+
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
C+ V EA ++ + KG + DV T+N+++ GLC + A +LF EM +G PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
+T+ LI C G +++ALN+ M ++TYNTLIDGFCK + +A +++
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
+M +S N ++Y LI+G C V +A +L +M+ +G KP + N+++ +CR G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
D KA + + M S G +PD ++Y TLI+G + ++ A L+ ++ +G+ YN
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614
Query: 420 VILTGFCRQGRMHDSELILWRMIEKG-LNPDRSTYTTLINGHVSQNN-LKEAFRFHDEML 477
++ G R+ + ++ + M+E+ PD +Y + G + ++EA F E+L
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELL 674
Query: 478 QRGFVPD 484
++GFVP+
Sbjct: 675 EKGFVPE 681
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 142/274 (51%), Gaps = 6/274 (2%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++++LC K+D A L +ME G +TYNTLI+ +C+ EA ++ + M G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ TYN+LI+GLCK R + A +++D+M+ G PD TYN+LL CR ++ +A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR--EMKSAGLVPDNVLYTIIIN 178
+I M+ G PDIV++ TLI + G+++ A R +MK L P Y +I
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQ 618
Query: 179 GYCRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAK-MLTEADDLFNEMLERGV 236
G R EA+ + EMLE+ D V+Y + GLC + EA D E+LE+G
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKS 270
P+F + L G + L +++ QK+
Sbjct: 679 VPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ CK +K A+ EME GV ++VTYNTLI+ C+ +E+A QLM+ M +G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP +TYNSL+ C+ G +A +++ M G PD TY TL+ C+ + A
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM-KSAGLVPDNVLYTIIING 179
++ + +G+ +++ +I R + A+ FREM + PD V Y I+ G
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Query: 180 YCR-NGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
C G + EA+ E+LEKG V + + + GL M L N ++++ F
Sbjct: 656 LCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFS 715
Query: 239 D 239
+
Sbjct: 716 E 716
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 234/393 (59%), Gaps = 11/393 (2%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+N LCK+ K+ AK FL ME G+ P VTYNTL+ + G +E A +++ M KG
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + TYN +++ +C +GR A EVL EM ++GL PD+ +YN +L+ C N + E
Sbjct: 291 FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYN-ILIRGC--SNNGDLE 344
Query: 121 EIFC---EMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
F EM ++G+ P +++TLI G+F N +++ A + RE++ G+V D+V Y I+
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
INGYC++G +A + DEM+ G TY +++ LCR EAD+LF +++ +G+
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
PD TL+ GHC GNM++A +L M SI PD VTYN L+ G C G+ E+A +
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
L +M R I P++ISY LI+GY G AF + EM+ G PTL++ N ++KG
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
++ + A+E L +M SEG+ P+ S+ ++I
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 265 bits (678), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 246/459 (53%), Gaps = 3/459 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+V C+ +D A M++KG YP T T N ++ R +E A+ M
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+K V+T+N +IN LCK+G+ +AK L M G+ P TYNTL+ + + A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
I EM +G PD+ +++ ++ G RA REMK GLVPD+V Y I+I G
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
NG + A RDEM+++G V TYNT+++GL + A+ L E+ E+G+ D
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ LI+G+C+ G+ KA L D M I+P TY +LI C+ + +A++L+
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
++ + + P+ + L++G+C++G++ AF L EM I P V+ N +++G C G
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+A E + +M G+ PD ISYNTLI+G+ ++ + AF + +M + G P ++TYN
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
+L G + +E +L M +G+ P+ S++ ++I
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 239/457 (52%), Gaps = 3/457 (0%)
Query: 30 TVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLD 89
T+ ++ L+ C+ ++EA + M KG P T N ++ L + R + A
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 90 EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
+M +M + + T+N ++ C++ + +A+ M G+ P IV+++TL+ FS G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
+++ A + EMKS G PD Y I++ C G E L+ EM E G V D V+YN
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYN 331
Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
++ G L A +EM+++G+ P FYT+ TLIHG + + A L + +K
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
I D VTYN LI+G+C+ G+ +KA L +M++ I P +Y LI C EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 330 FRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLING 389
L+ ++VGKG+KP LV NT++ G+C G+ +A L +M ++PD ++YN L+ G
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 390 FVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
E ++A L+ +M+ +G+ PD I+YN +++G+ ++G + ++ M+ G NP
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571
Query: 450 RSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
TY L+ G + A EM G VP+D+
Sbjct: 572 LLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDS 608
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 127/250 (50%), Gaps = 35/250 (14%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ L ++KI++A++ + E+ +KG+ D+VTYN LIN YC+ G ++AF L + M G
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG 427
Query: 61 LKPGVFTYNSLINGLCKK------------------------------GRC-----DRAK 85
++P FTY SLI LC+K G C DRA
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487
Query: 86 EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
+L EM M ++PD TYN L+ C + EA E+ EM RRG+ PD +S++TLI +
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDV 205
S+ G A M EM S G P + Y ++ G +N A ++ EM +G V +
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Query: 206 VTYNTILNGL 215
++ +++ +
Sbjct: 608 SSFCSVIEAM 617
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 1 MVNALCKDH----KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSM 56
M+N L H +D A L EM+ + PD VTYN L+ C EG EEA +LM M
Sbjct: 469 MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Query: 57 SGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENM 116
+G+KP +YN+LI+G KKG A V DEML +G +P TYN LL + +
Sbjct: 529 KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEG 588
Query: 117 SEAEEIFCEMSRRGVAPDIVSFSTLIGIFS 146
AEE+ EM G+ P+ SF ++I S
Sbjct: 589 ELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 274/487 (56%), Gaps = 2/487 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ CK++ + SA + +ME++G P++VT++ LI + + G +E+A + M G
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L P VF +++I G K + + A ++ DE + GL+ + NT+L C++ EA
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEAT 463
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+ +M RG+ P++VS++ ++ R +D A + F + GL P+N Y+I+I+G
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVFPD 239
RN AL++ + M ++ V Y TI+NGLC+ ++A +L M+E + +
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
++ ++I G K+G M+ A+ ++ M I P+++TY +L++G CK M++A ++
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
+M ++ + + +YG LI+G+C ++ A L+ E++ +G+ P+ N++I G+ G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
+ A + KM+ +G+ D +Y TLI+G +++ N+ A L ++M+ GLVPD I Y
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
VI+ G ++G+ + M + + P+ Y +I GH + NL EAFR HDEML +
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 480 GFVPDDA 486
G +PD A
Sbjct: 824 GILPDGA 830
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 268/522 (51%), Gaps = 38/522 (7%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ A ++ K A L ++G PD++ Y+ + A C+ L A L+ M K
Sbjct: 239 LMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK 298
Query: 61 L-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
L P TY S+I K+G D A + DEML G+S + +L+ C+ ++ A
Sbjct: 299 LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSA 358
Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
+F +M + G +P+ V+FS LI F +NG++++AL ++++M+ GL P II G
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG 418
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
+ + EALK+ DE E G + +V NTIL+ LC+ EA +L ++M RG+ P+
Sbjct: 419 WLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID---------------- 283
++ ++ GHC+ NM+ A +F + +K +KP+ TY+ LID
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 284 -------------------GFCKVGEMEKANKLWADMISRK-ISPNYISYGILINGYCSM 323
G CKVG+ KA +L A+MI K + + +SY +I+G+
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
G + A + EM G GI P +++ +++ G C++ +A E +M ++GV D +Y
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
LI+GF + NM+ A AL S++ +GL P YN +++GF G M + + +M++
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
GL D TYTTLI+G + NL A + EM G VPD+
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/544 (28%), Positives = 247/544 (45%), Gaps = 78/544 (14%)
Query: 11 IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNS 70
+DSAK F E+ + +N L+NAY ++ + A ++N M + P N
Sbjct: 151 VDSAKSFGFEVNSRA-------FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNR 203
Query: 71 LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
++ L ++ AKE+ M+ +G+ D T L+ S R+E +EA E+ RG
Sbjct: 204 TLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERG 263
Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGL-VPDNVLYTIIINGYCRNGFVLEA 189
PD + +S + + L A REMK L VP YT +I + G + +A
Sbjct: 264 AEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDA 323
Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
++++DEML G M+VV +++ G C+ L A LF++M + G P+ TF+ LI
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383
Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF------------------------ 285
K+G M KAL + M + P + +T+I G+
Sbjct: 384 FRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 443
Query: 286 ----------CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYE 335
CK G+ ++A +L + M SR I PN +SY ++ G+C ++ A ++
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 336 MVGKGIKPT--------------------------LVSCN---------TIIKGYCRSGD 360
++ KG+KP + S N TII G C+ G
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 361 ASKADEFLSKMVSEG-VDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
SKA E L+ M+ E + +SYN++I+GF +E MD A A +M G+ P+VITY
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
++ G C+ RM + + M KG+ D Y LI+G ++N++ A E+L+
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 480 GFVP 483
G P
Sbjct: 684 GLNP 687
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 209/410 (50%), Gaps = 2/410 (0%)
Query: 51 QLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVES 110
+L++S G + +N L+N K + D A +++++ML++ + P N L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 111 CRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDN 170
++ +++EA+E++ M GV D V+ L+ R + AL G PD+
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKG-CVMDVVTYNTILNGLCRAKMLTEADDLFN 229
+LY++ + C+ + A + EM EK CV TY +++ + + +A L +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
EML G+ + T+LI GHCK+ ++ AL LFD M ++ P+ VT++ LI+ F K G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388
Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
EMEKA + + M ++P+ +I G+ EA +L+ E G+ V CN
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFV-CN 447
Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
TI+ C+ G +A E LSKM S G+ P+ +SYN ++ G R++NMD A + S + +
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507
Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
GL P+ TY++++ G R ++ ++ M + + Y T+ING
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 158/293 (53%), Gaps = 3/293 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEM-EQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK 59
++N LCK + A+ L M E+K + ++YN++I+ + +EG ++ A M G
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 60 GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
G+ P V TY SL+NGLCK R D+A E+ DEM G+ D Y L+ C++ NM A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
+F E+ G+ P +++LI F G + AL +++M GL D YT +I+G
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
++G ++ A ++ EM G V D + Y I+NGL + + +F EM + V P+
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEME 292
+ +I GH ++GN+++A L D M K I PD T++ L+ G +VG ++
Sbjct: 794 VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGNLQ 844
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 263/540 (48%), Gaps = 56/540 (10%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLE------------- 47
+++AL + +++D M ++ V D TY+ LI A+CR G ++
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251
Query: 48 --------EAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPD 99
A +L SM KGL P +TY+ LI+GLCK R + AK +L EM +G+S D
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 100 TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
TY+ L+ + N A+ + EM G+ + I + S+ G +++A F
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371
Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
M ++GL+P Y +I GYCR V + ++ EM ++ V+ TY T++ G+C +
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431
Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
L A ++ EM+ G P+ +TTLI ++ A+ + M ++ I PDI YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGK 339
+LI G K M++A +M+ + PN +YG I+GY A + EM
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 340 GIKPTLVSCNTIIKGYCRSG-------------------DASK----------------A 364
G+ P V C +I YC+ G DA A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTG 424
+E +M +G+ PD SY LINGF + NM KA ++ +M +GL P+VI YN++L G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 425 FCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
FCR G + ++ +L M KGL+P+ TY T+I+G+ +L EAFR DEM +G VPD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 257/518 (49%), Gaps = 38/518 (7%)
Query: 5 LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
+ K+ ++ AK M G+ P Y +LI YCRE + + ++L+ M + +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 65 VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
+TY +++ G+C G D A ++ EM+ G P+ Y TL+ + +A +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
EM +G+APDI +++LI S+ ++D A + EM GL P+ Y I+GY
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
A K EM E G + + V ++N C+ + EA + M+++G+ D T+T
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR 304
L++G K+ ++ A +F M K I PD+ +Y LI+GF K+G M+KA+ ++ +M+
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 305 KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA 364
++PN I Y +L+ G+C G + +A L EM KG+ P V+ TII GYC+SGD ++A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 365 DEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF------------------ALVS-- 404
+M +G+ PDS Y TL++G R ++++A AL++
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV 776
Query: 405 ----KMENQGLV--------------PDVITYNVILTGFCRQGRMHDSELILWRMIEKGL 446
K E + V P+ +TYN+++ C++G + ++ + +M L
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 447 NPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
P TYT+L+NG+ E F DE + G PD
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Score = 259 bits (661), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 249/488 (51%), Gaps = 5/488 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+V +C +D A + EM G P+ V Y TLI + + +A +++ M +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P +F YNSLI GL K R D A+ L EM++ GL P+ TY + + A+
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ EM GV P+ V + LI + + G++ A +R M G++ D YT+++NG
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+N V +A ++ EM KG DV +Y ++NG + + +A +F+EM+E G+ P+
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+ L+ G C+ G + KA L D M+ K + P+ VTY T+IDG+CK G++ +A +L+ +
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M + + P+ Y L++G C + V A + + KG + N +I + G
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGK 781
Query: 361 ASKADEFLSKMVSEGVD----PDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
E L++++ D P+ ++YN +I+ +E N++ A L +M+N L+P VI
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
TY +L G+ + GR + + I G+ PD Y+ +IN + + +A D+M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 477 LQRGFVPD 484
+ V D
Sbjct: 902 FAKNAVDD 909
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 252/469 (53%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ LCK +++ AK L EM+ GV D TY+ LI+ + + A L++ M G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ + Y+ I + K+G ++AK + D M+ GL P Y +L+ CR++N+ +
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+ EM +R + ++ T++ +G LD A +EM ++G P+ V+YT +I +
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+N +A+++ EM E+G D+ YN+++ GL +AK + EA EM+E G+ P+
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+ I G+ + A M + + P+ V LI+ +CK G++ +A +
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+ + I + +Y +L+NG V +A ++ EM GKGI P + S +I G+ + G+
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
KA +MV EG+ P+ I YN L+ GF R ++KA L+ +M +GL P+ +TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
I+ G+C+ G + ++ + M KGL PD YTTL++G N+++ A
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 251/479 (52%), Gaps = 11/479 (2%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ L K ++D A+ FL EM + G+ P+ TY I+ Y A + + M G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P LIN CKKG+ A M+ G+ D TY L+ + + + +AE
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
EIF EM +G+APD+ S+ LI FS+ G + +A F EM GL P+ ++Y +++ G+
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
CR+G + +A ++ DEM KG + VTY TI++G C++ L EA LF+EM +G+ PD
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKA----NK 296
+ +TTL+ G C+ ++ +A+ +F +K +N LI+ K G+ E N+
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
L R PN ++Y I+I+ C G++ A L+++M + PT+++ +++ GY
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD-- 414
+ G ++ + ++ G++PD I Y+ +IN F++E KA LV +M + V D
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 415 ---VITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH-VSQNNLKEA 469
+ T +L+GF + G M +E ++ M+ PD +T LIN +S N EA
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 225/501 (44%), Gaps = 49/501 (9%)
Query: 19 CEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKK 78
C E G D V + L + Y +G++EEA + +S G L P + L++ L +
Sbjct: 140 CSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRW 199
Query: 79 GRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSF 138
R D +V M++ + D TY+ L++ CR N+ +++ F
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--------------F 245
Query: 139 STLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLE 198
T + +D AL M GLVP Y ++I+G C+ + +A + EM
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS 305
Query: 199 KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNK 258
G +D TY+ +++GL + + A L +EM+ G+ Y + I K+G M K
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
A LFD M + P Y +LI+G+C+ + + +L +M R I + +YG ++
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
G CS G + A+ + EM+ G +P +V T+IK + ++ A L +M +G+ P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF------------- 425
D YN+LI G + + MD+A + + +M GL P+ TY ++G+
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 426 ----------------------CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
C++G++ ++ M+++G+ D TYT L+NG
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 464 NNLKEAFRFHDEMLQRGFVPD 484
+ + +A EM +G PD
Sbjct: 606 DKVDDAEEIFREMRGKGIAPD 626
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 34/249 (13%)
Query: 257 NKALNLFD-IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI--------- 306
+K L+ F+ + +QK + + +++ L C G EKA + MI R
Sbjct: 78 SKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSI 137
Query: 307 ----------SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
S + + +GIL +GY + G++ EA ++ +G + P L C ++
Sbjct: 138 VRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197
Query: 357 RSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVI 416
R + MV V D +Y+ LI R N+ ++ K E +
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTA--- 254
Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
T NV G + E MI KGL P + TY LI+G L++A EM
Sbjct: 255 TLNV-------DGALKLKE----SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 477 LQRGFVPDD 485
G D+
Sbjct: 304 DSLGVSLDN 312
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 275 bits (703), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/494 (31%), Positives = 258/494 (52%), Gaps = 13/494 (2%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ CK +D AK F C + + G+ P ++N LIN C G + EA +L + M+ G
Sbjct: 270 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 329
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
++P TYN L G G A EV+ +ML GLSPD TY LL C+ N+
Sbjct: 330 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 389
Query: 121 EIFCEMSRRGVAPD-IVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
+ +M RG + I+ S ++ + G++D AL F +MK+ GL PD V Y+I+I+G
Sbjct: 390 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 449
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
C+ G AL + DEM +K + + T+ +L GLC+ ML EA L + ++ G D
Sbjct: 450 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 509
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
+ +I G+ K G + +AL LF ++ + I P + T+N+LI G+CK + +A K+
Sbjct: 510 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 569
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
+ ++P+ +SY L++ Y + G+ L EM +GI PT V+ + I KG CR
Sbjct: 570 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 629
Query: 360 DA------------SKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
K + L M SEG+ PD I+YNT+I R +++ AF + M+
Sbjct: 630 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 689
Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
++ L TYN+++ C G + ++ ++ + E+ ++ + YTTLI H + + +
Sbjct: 690 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 749
Query: 468 EAFRFHDEMLQRGF 481
A + ++L RGF
Sbjct: 750 MAVKLFHQLLHRGF 763
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 233/458 (50%), Gaps = 10/458 (2%)
Query: 31 VTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR-CDRAKEVLD 89
+ ++ L+ R ++++ ++ M + L +YNS++ + + D KE+ D
Sbjct: 167 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 226
Query: 90 EMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNG 149
+ + TY+T++ CR++ + +A + + P +VSF++++ + + G
Sbjct: 227 K--------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 278
Query: 150 QLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
+D A +F + GLVP + I+ING C G + EAL++ +M + G D VTYN
Sbjct: 279 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 338
Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
+ G M++ A ++ +ML++G+ PD T+T L+ G C+ GN++ L L M +
Sbjct: 339 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 398
Query: 270 SIKPD-IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTE 328
+ + I+ + ++ G CK G +++A L+ M + +SP+ ++Y I+I+G C +G
Sbjct: 399 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 458
Query: 329 AFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLIN 388
A L+ EM K I P + ++ G C+ G +A L ++S G D + YN +I+
Sbjct: 459 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 518
Query: 389 GFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
G+ + +++A L + G+ P V T+N ++ G+C+ + ++ IL + GL P
Sbjct: 519 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 578
Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
+YTTL++ + + N K EM G P +
Sbjct: 579 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 616
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 218/457 (47%), Gaps = 23/457 (5%)
Query: 6 CKDHKIDSAKMFLCEMEQKGVYPDTVT-YNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
C+ ID + L +M +G +++ + +++ C+ G ++EA L N M GL P
Sbjct: 380 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 439
Query: 65 VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
+ Y+ +I+GLCK G+ D A + DEM + P++ T+ LL+ C+K + EA +
Sbjct: 440 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 499
Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNG 184
+ G DIV ++ +I ++++G ++ AL F+ + G+ P + +I GYC+
Sbjct: 500 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 559
Query: 185 FVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
+ EA K+ D + G VV+Y T+++ D+L EM G+ P T++
Sbjct: 560 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYS 619
Query: 245 TLIHGHC---KDGNMNKALN--LFDI-------MTQKSIKPDIVTYNTLIDGFCKVGEME 292
+ G C K N N L +F+ M + I PD +TYNT+I C+V +
Sbjct: 620 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 679
Query: 293 KANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTII 352
A M SR + + +Y ILI+ C G++ +A Y + + + + + T+I
Sbjct: 680 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 739
Query: 353 KGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
K +C GD A + +++ G + Y+ +IN R ++++ M +QG+
Sbjct: 740 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGIS 799
Query: 413 PDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPD 449
PD+ V++ EL+ W I+ GL PD
Sbjct: 800 PDLDICEVMIKS---------DELLSW-TIKWGLLPD 826
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 201/426 (47%), Gaps = 22/426 (5%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M++ LCK +ID A +M+ G+ PD V Y+ +I+ C+ G + A L + M K
Sbjct: 411 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 470
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P T+ +L+ GLC+KG A+ +LD ++ G + D YN ++ + + EA
Sbjct: 471 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 530
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+F + G+ P + +F++LI + + + A +K GL P V YT +++ Y
Sbjct: 531 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 590
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA------------KMLTEADDLF 228
G ++R EM +G VTY+ I GLCR ++ +
Sbjct: 591 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 650
Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
+M G+ PD T+ T+I C+ +++ A +IM +++ TYN LID C
Sbjct: 651 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 710
Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
G + KA+ + + +S + +Y LI +C G A +L+++++ +G ++
Sbjct: 711 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 770
Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
+ +I CR +++ F M+S+G+ PD E M K+ L+S
Sbjct: 771 SAVINRLCRRHLVNESKFFFCLMLSQGISPD----------LDICEVMIKSDELLSWTIK 820
Query: 409 QGLVPD 414
GL+PD
Sbjct: 821 WGLLPD 826
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 275 bits (702), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 245/482 (50%), Gaps = 1/482 (0%)
Query: 6 CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
C+ + L M +KG PD + LI + + +A ++M + G +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 66 FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
F YN+LING CK R D A VLD M SPDT TYN ++ C + + A ++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
+ P +++++ LI G +D AL EM S GL PD Y II G C+ G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 186 VLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTT 245
V A +M + KGC DV++YN +L L E + L +M P+ T++
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 246 LIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK 305
LI C+DG + +A+NL +M +K + PD +Y+ LI FC+ G ++ A + MIS
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 306 ISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKAD 365
P+ ++Y ++ C G +A ++ ++ G P S NT+ SGD +A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 366 EFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGF 425
+ +M+S G+DPD I+YN++I+ RE +D+AF L+ M + P V+TYN++L GF
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 426 CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
C+ R+ D+ +L M+ G P+ +TYT LI G EA +++++ + +
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY 578
Query: 486 AF 487
+F
Sbjct: 579 SF 580
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 204/372 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+ +LC K+D A L ++ P +TY LI A EG ++EA +LM+ M +G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
LKP +FTYN++I G+CK+G DRA E++ + G PD +YN LL + E E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ +M P++V++S LI R+G+++ A+ + MK GL PD Y +I +
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
CR G + A++ + M+ GC+ D+V YNT+L LC+ +A ++F ++ E G P+
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
++ T+ G+ +AL++ M I PD +TYN++I C+ G +++A +L D
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M S + P+ ++Y I++ G+C + +A + MVG G +P + +I+G +G
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558
Query: 361 ASKADEFLSKMV 372
++A E + +V
Sbjct: 559 RAEAMELANDLV 570
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 205/407 (50%), Gaps = 4/407 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N CK ++ID A L M K PDTVTYN +I + C G L+ A +++N +
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P V TY LI +G D A +++DEML GL PD TYNT++ C++ + A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+ + +G PD++S++ L+ G+ + +M S P+ V Y+I+I
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
CR+G + EA+ + M EKG D +Y+ ++ CR L A + M+ G PD
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+ T++ CK+G ++AL +F + + P+ +YNT+ G+ +A + +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S I P+ I+Y +I+ C G V EAF L +M P++V+ N ++ G+C++
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGF----VREENMDKAFALV 403
A L MV G P+ +Y LI G R E M+ A LV
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 202 bits (513), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 190/376 (50%), Gaps = 1/376 (0%)
Query: 110 SCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPD 169
SCR N E+ + M R+G PD++ + LI F + +A+ ++ G PD
Sbjct: 99 SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPD 157
Query: 170 NVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFN 229
Y +ING+C+ + +A ++ D M K D VTYN ++ LC L A + N
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 230 EMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVG 289
++L P T+T LI +G +++AL L D M + +KPD+ TYNT+I G CK G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
+++A ++ ++ + P+ ISY IL+ + G E +L +M + P +V+ +
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
+I CR G +A L M +G+ PD+ SY+ LI F RE +D A + M +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
G +PD++ YN +L C+ G+ + I ++ E G +P+ S+Y T+ + S + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 470 FRFHDEMLQRGFVPDD 485
EM+ G PD+
Sbjct: 458 LHMILEMMSNGIDPDE 473
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 169/309 (54%), Gaps = 1/309 (0%)
Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
I + CR+G +E+L + + M+ KG DV+ ++ G + + +A + E+LE+
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153
Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
PD + + LI+G CK ++ A + D M K PD VTYN +I C G+++ A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
K+ ++S P I+Y ILI G V EA +L EM+ +G+KP + + NTII+G
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
C+ G +A E + + +G +PD ISYN L+ + + ++ L++KM ++ P+V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
+TY++++T CR G++ ++ +L M EKGL PD +Y LI + L A F +
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 476 MLQRGFVPD 484
M+ G +PD
Sbjct: 394 MISDGCLPD 402
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M++ LC++ +D A L +M +P VTYN ++ +C+ +E+A ++ SM G G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQM 94
+P TY LI G+ G A E+ ++++++
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 260/481 (54%), Gaps = 5/481 (1%)
Query: 7 KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
+D K+D A +M + +P V ++ L++A + + L M G+ ++
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 67 TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
TY+ IN C++ + A +L +M+++G P T N+LL C +SEA + +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 127 SRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
G PD V+F+TL+ G+F N + A+ M G PD V Y +ING C+ G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHN-KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 186 VLEALKMRDEMLEKGCV-MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFT 244
AL + ++M EKG + DVV YNTI++GLC+ K + +A DLFN+M +G+ PD +T+
Sbjct: 231 PDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 245 TLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMI-S 303
LI C G + A L M +K+I PD+V +N LID F K G++ +A KL+ +M+ S
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 304 RKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASK 363
+ P+ ++Y LI G+C V E ++ EM +G+ V+ T+I G+ ++ D
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 364 ADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILT 423
A +MVS+GV PD ++YN L++G N++ A + M+ + + D++TY ++
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 424 GFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
C+ G++ D + + KG+ P+ TYTT+++G + +EA EM + G +P
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 484 D 484
+
Sbjct: 530 N 530
Score = 265 bits (676), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 242/437 (55%), Gaps = 2/437 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C ++I A + +M + G PDTVT+ TL++ + EA L+ M KG
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + TY ++INGLCK+G D A +L++M + + D YNT++ C+ ++M +A
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++F +M +G+ PD+ +++ LI G+ A +M + PD V + +I+ +
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 181 CRNGFVLEALKMRDEMLE-KGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
+ G ++EA K+ DEM++ K C DVV YNT++ G C+ K + E ++F EM +RG+ +
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
T+TTLIHG + + + A +F M + PDI+TYN L+DG C G +E A ++
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
M R + + ++Y +I C G V + + L+ + KG+KP +V+ T++ G+CR G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
+AD +M +G P+S +YNTLI +R+ + + L+ +M + G D T+
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Query: 420 VILTGFCRQGRMHDSEL 436
++ T GR+ S L
Sbjct: 571 LV-TNMLHDGRLDKSFL 586
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 249/485 (51%), Gaps = 1/485 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K +K D +M+ G+ + TY+ IN +CR L A ++ M G
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P + T NSL+NG C R A ++D+M++MG PDT T+ TL+ + SEA
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M +G PD+V++ +I + G+ D AL +M+ + D V+Y II+G
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ + +A + ++M KG DV TYN +++ LC ++A L ++MLE+ + PD
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQ-KSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
F LI K+G + +A L+D M + K PD+V YNTLI GFCK +E+ +++
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
+M R + N ++Y LI+G+ A ++ +MV G+ P +++ N ++ G C +G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
+ A M + D ++Y T+I + ++ + L + +G+ P+V+TY
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
+++GFCR+G +++ + M E G P+ TY TLI + + + EM
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Query: 480 GFVPD 484
GF D
Sbjct: 561 GFAGD 565
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 134/267 (50%)
Query: 221 LTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNT 280
L +A LF +M++ FP F+ L+ K + ++L + M I ++ TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 281 LIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG 340
I+ FC+ ++ A + M+ P+ ++ L+NG+C ++EA L +MV G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 341 IKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAF 400
+P V+ T++ G + AS+A + +MV +G PD ++Y +ING + D A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 401 ALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
L++KME + DV+ YN I+ G C+ M D+ + +M KG+ PD TY LI+
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 461 VSQNNLKEAFRFHDEMLQRGFVPDDAF 487
+ +A R +ML++ PD F
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVF 322
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 262/485 (54%), Gaps = 5/485 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K +K + +M+ G+ D TY+ IN +CR L A ++ M G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T +SL+NG C R A ++D+M++MG PDT T+ TL+ SEA
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M +RG PD+V++ T++ + G +D AL +M++A + + V++ II+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ V A+ + EM KG +VVTYN+++N LC ++A L + MLE+ + P+
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF LI K+G + +A L + M Q+SI PD +TYN LI+GFC +++A +++
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S+ PN +Y LING+C V + L+ EM +G+ V+ TII+G+ ++GD
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A +MVS V D ++Y+ L++G +D A + ++ + ++ YN
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 421 ILTGFCRQGRMHDSELILWRMI-EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
++ G C+ G++ ++ W + + PD TY T+I+G S+ L+EA +M +
Sbjct: 509 MIEGMCKAGKVGEA----WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 480 GFVPD 484
G +P+
Sbjct: 565 GTLPN 569
Score = 252 bits (643), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 235/436 (53%), Gaps = 4/436 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ L +K A + +M Q+G PD VTY T++N C+ G ++ A L+N M
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+K V +N++I+ LCK + A ++ EM G+ P+ TYN+L+ C S+A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M + + P++V+F+ LI F + G+L A EM + PD + Y ++ING+
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C + + EA +M M+ K C+ ++ TYNT++NG C+ K + + +LF EM +RG+ +
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+TT+I G + G+ + A +F M + DI+TY+ L+ G C G+++ A ++
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ ++ N Y +I G C G V EA+ L+ + IKP +V+ NT+I G C
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+AD+ KM +G P+S +YNTLI +R+ + + L+ +M + G V D T ++
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610
Query: 421 ILTGFCRQGRMHDSEL 436
+ T GR+ S L
Sbjct: 611 V-TNMLHDGRLDKSFL 625
Score = 245 bits (626), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 242/458 (52%), Gaps = 3/458 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C +I A + +M + G PDT T+ TLI+ EA L++ M +G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + TY +++NGLCK+G D A +L++M + + +NT++ C+ ++ A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++F EM +G+ P++V++++LI G+ A M + P+ V + +I+ +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G ++EA K+ +EM+++ D +TYN ++NG C L EA +F M+ + P+
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLI+G CK + + LF M+Q+ + + VTY T+I GF + G+ + A ++
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+S ++ + ++Y IL++G CS G + A ++ + ++ + NT+I+G C++G
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+A + + + PD ++YNT+I+G + + +A L KM+ G +P+ TYN
Sbjct: 519 VGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
++ R S ++ M G D ST + + N
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 222/415 (53%), Gaps = 1/415 (0%)
Query: 71 LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
L N L + D A ++ +M++ P +N LL + + +M G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
++ D+ ++S I F R QL AL +M G PD V + ++NGYC + + +A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
+ D+M+E G D T+ T+++GL +EA L ++M++RG PD T+ T+++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
CK G+++ ALNL + M IK ++V +NT+ID CK +E A L+ +M ++ I PN
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
++Y LIN C+ G ++A RL M+ K I P +V+ N +I + + G +A++ +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
M+ +DPD+I+YN LINGF +D+A + M ++ +P++ TYN ++ GFC+ R
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
+ D + M ++GL + TYTT+I G + A +M+ VP D
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR-VPTD 467
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%)
Query: 315 ILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSE 374
IL N + V +A L+ +MV P++V N ++ + +M +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 375 GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDS 434
G+ D +Y+ IN F R + A A+++KM G PD++T + +L G+C R+ D+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 435 ELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
++ +M+E G PD T+TTLI+G N EA D+M+QRG PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 256/486 (52%), Gaps = 2/486 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ LC++ + A L EM + + PD +YNT+I +C LE+A +L N M G G
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ T+ LI+ CK G+ D A L EM MGL D Y +L+ C + +
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+F E+ RG +P ++++TLI F + GQL A F M G+ P+ YT +I+G
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G EAL++ + M+EK + VTYN I+N LC+ ++ +A ++ M +R PD
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKS--IKPDIVTYNTLIDGFCKVGEMEKANKLW 298
T+ L+ G C G++++A L +M + S PD+++YN LI G CK + +A ++
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
++ + + + ++ IL+N G V +A LW ++ I + +I G+C++
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
G + A L KM + P YN L++ +E ++D+A+ L +M+ PDV+++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
N+++ G + G + +E +L M GL+PD TY+ LIN + L EA F D+M+
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 479 RGFVPD 484
GF PD
Sbjct: 628 SGFEPD 633
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 252/486 (51%), Gaps = 2/486 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ C+ +++ A EM+ G VT+ LI+A+C+ G ++EA + M G
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L+ + Y SLI G C G DR K + DE+L+ G SP TYNTL+ C+ + EA
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
EIF M RGV P++ +++ LI G+ AL M P+ V Y IIIN
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF--P 238
C++G V +A+++ + M ++ D +TYN +L GLC L EA L ML+ + P
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
D ++ LIHG CK+ +++AL+++D++ +K D VT N L++ K G++ KA +LW
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
+ KI N +Y +I+G+C G + A L +M ++P++ N ++ C+
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
G +A +M + PD +S+N +I+G ++ ++ A +L+ M GL PD+ TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
+ ++ F + G + ++ +M++ G PD +++ +SQ + +++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 479 RGFVPD 484
+ V D
Sbjct: 663 KDIVLD 668
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 195/378 (51%), Gaps = 2/378 (0%)
Query: 104 NTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS 163
N L+ + R N A + +M + VS S L+ + + + A M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 164 AGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTE 223
G + + I++ G CRN +A+ + EM + DV +YNT++ G C K L +
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 224 ADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLID 283
A +L NEM G T+ LI CK G M++A+ M ++ D+V Y +LI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 284 GFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKP 343
GFC GE+++ L+ +++ R SP I+Y LI G+C +G + EA ++ M+ +G++P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALV 403
+ + +I G C G +A + L+ M+ + +P++++YN +IN ++ + A +V
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 404 SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKG--LNPDRSTYTTLINGHV 461
M+ + PD ITYN++L G C +G + ++ +L+ M++ +PD +Y LI+G
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435
Query: 462 SQNNLKEAFRFHDEMLQR 479
+N L +A +D ++++
Sbjct: 436 KENRLHQALDIYDLLVEK 453
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 173/342 (50%), Gaps = 9/342 (2%)
Query: 148 NGQLDRALMYFREMKSAG----LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
N QL A+ F++ +G +N++ ++ + RN + A +MLE +
Sbjct: 51 NPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRS---RNHEL--AFSFYRKMLETDTFI 105
Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
+ V+ + +L + + A + ML+RG + Y L+ G C++ KA++L
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
M + S+ PD+ +YNT+I GFC+ E+EKA +L +M S + +++GILI+ +C
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
G + EA EM G++ LV ++I+G+C G+ + +++ G P +I+Y
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
NTLI GF + + +A + M +G+ P+V TY ++ G C G+ ++ +L MIE
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
K P+ TY +IN + +A + M +R PD+
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 266/486 (54%), Gaps = 1/486 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
+VNALCK+ ++A+MF+ ++ + G D+ +L+ +CR L +A ++ + MS +
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEV 260
Query: 60 GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
P +Y+ LI+GLC+ GR + A + D+M + G P T TY L+ C + + +A
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320
Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
+F EM RG P++ +++ LI R+G+++ A R+M + P + Y +ING
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
YC++G V+ A ++ M ++ C +V T+N ++ GLCR +A L ML+ G+ PD
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
++ LI G C++G+MN A L M I+PD +T+ +I+ FCK G+ + A+
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
M+ + IS + ++ LI+G C +G +A + +V I T S N I+ +
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC 560
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
+ L K+ G+ P ++Y TL++G +R ++ +F ++ M+ G +P+V Y
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
+I+ G C+ GR+ ++E +L M + G++P+ TYT ++ G+V+ L A M++R
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 480 GFVPDD 485
G+ +D
Sbjct: 681 GYELND 686
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 240/503 (47%), Gaps = 23/503 (4%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ ALC ID A EM +G P+ TY LI+ CR+G +EEA + M
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P V TYN+LING CK GR A E+L M + P+ T+N L+ CR +A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M G++PDIVS++ LI R G ++ A M + PD + +T IIN +
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ G A ML KG +D VT T+++G+C+ +A + +++ +
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
++ ++ K + + L + + + + P +VTY TL+DG + G++ + ++
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M PN Y I+ING C G V EA +L M G+ P V+ ++KGY +G
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFV-------------------REENMDKAFA 401
+A E + MV G + + Y++L+ GFV RE + +
Sbjct: 667 LDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINE 726
Query: 402 LVSKMEN-QGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGH 460
L+S +E G + + + ++T C++GR +S ++ ++E+G+ +++ ++ +
Sbjct: 727 LISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKAM-DIIMESY 783
Query: 461 VSQNNLKEAFRFHDEMLQRGFVP 483
S+ + +L+ GFVP
Sbjct: 784 CSKKKHTKCMELITLVLKSGFVP 806
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 216/496 (43%), Gaps = 124/496 (25%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ LC+D KI+ A +M + ++P +TYN LIN YC++G + AF+L+ M +
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP V T+N L+ GLC+ G+ +A +L ML GLSPD +YN L+ CR+ +M+ A
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 121 EI----------------------FCE-------------MSRRGVAPDIVSFSTLIG-- 143
++ FC+ M R+G++ D V+ +TLI
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 144 ---------------------------------IFSRNGQLDRALMYFREMKSAGLVPDN 170
+ S+ ++ L ++ GLVP
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581
Query: 171 VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNE 230
V YT +++G R+G + + ++ + M GC+ +V Y I+NGLC+ + EA+ L +
Sbjct: 582 VTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 231 MLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF----- 285
M + GV P+ T+T ++ G+ +G +++AL M ++ + + Y++L+ GF
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Query: 286 ------------------------------------------------CKVGEMEKANKL 297
CK G +++N L
Sbjct: 702 GIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDL 761
Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
+++ R + + I++ YCS T+ L ++ G P+ S +I+G +
Sbjct: 762 VQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820
Query: 358 SGDASKADEFLSKMVS 373
GDA +A E + ++++
Sbjct: 821 EGDAERARELVMELLT 836
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 157/370 (42%), Gaps = 94/370 (25%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNS----- 55
++NA CK K D A FL M +KG+ D VT TLI+ C+ G +A ++ +
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 56 --------------------------MSGK----GLKPGVFTYNSLINGLCKKGRCDRAK 85
M GK GL P V TY +L++GL + G +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 86 EVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIF 145
+L+ M G P+ Y ++ C+ + EAE++ M GV+P+ V+++ ++ +
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 146 SRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLE----------ALKMRD- 194
NG+LDRAL R M G ++ +Y+ ++ G+ + ++ AL+ D
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDP 721
Query: 195 -------EMLEK--GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVF-------- 237
++E+ GC+ + + ++ LC+ E++DL +LERGVF
Sbjct: 722 ECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDII 779
Query: 238 --------------------------PDFYTFTTLIHGHCKDGNMNKALNL-FDIMTQKS 270
P F +F +I G K+G+ +A L +++T
Sbjct: 780 MESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNG 839
Query: 271 I--KPDIVTY 278
+ K ++TY
Sbjct: 840 VVEKSGVLTY 849
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 272 bits (695), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 260/476 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ K H+ A L EM G P VTYN+LI+AY R+G L+EA +L N M+ KG
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP VFTY +L++G + G+ + A + +EM G P+ T+N + + +E
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+IF E++ G++PDIV+++TL+ +F +NG F+EMK AG VP+ + +I+ Y
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
R G +A+ + ML+ G D+ TYNT+L L R M +++ + EM + P+
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ +L+H + + +L + + I+P V TL+ K + +A + +++
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ R SP+ + +++ Y V +A + M +G P++ + N+++ + RS D
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
K++E L +++++G+ PD ISYNT+I + R M A + S+M N G+VPDVITYN
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEM 476
+ + ++ ++ MI+ G P+++TY ++++G+ N EA F +++
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 243/500 (48%), Gaps = 35/500 (7%)
Query: 20 EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
+M+ G+ PD TYNTLI R +EA Q+ M G TYN+L++ K
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 80 RCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFS 139
R A +VL+EM+ G SP TYN+L+ R + EA E+ +M+ +G PD+ +++
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 140 TLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEK 199
TL+ F R G+++ A+ F EM++AG P+ + I Y G E +K+ DE+
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 200 GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKA 259
G D+VT+NT+L + M +E +F EM G P+ TF TLI + + G+ +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 260 LNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILING 319
+ ++ M + PD+ TYNT++ + G E++ K+ A+M + PN ++Y L++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 320 YCSMGHV-----------------------------------TEAFRLWYEMVGKGIKPT 344
Y + + EA R + E+ +G P
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 345 LVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVS 404
+ + N+++ Y R +KA+ L M G P +YN+L+ R + K+ ++
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 405 KMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
++ +G+ PD+I+YN ++ +CR RM D+ I M G+ PD TY T I + + +
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 465 NLKEAFRFHDEMLQRGFVPD 484
+EA M++ G P+
Sbjct: 749 MFEEAIGVVRYMIKHGCRPN 768
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 250/520 (48%), Gaps = 36/520 (6%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ L K+ ++ SA +++ G D +Y +LI+A+ G EA + M G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 61 LKPGVFTYNSLINGLCKKGR-CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEA 119
KP + TYN ++N K G ++ ++++M G++PD TYNTL+ R EA
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
++F EM G + D V+++ L+ ++ ++ + A+ EM G P V Y +I+
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
Y R+G + EA++++++M EKG DV TY T+L+G RA + A +F EM G P+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
TF I + G + + +FD + + PDIVT+NTL+ F + G + + ++
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
+M P ++ LI+ Y G +A ++ M+ G+ P L + NT++ R G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD---------------------K 398
++++ L++M P+ ++Y +L++ + + + K
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 399 AFALV--------------SKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEK 444
LV S+++ +G PD+ T N +++ + R+ + + +L M E+
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 445 GLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
G P +TY +L+ H + ++ E+L +G PD
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 181/391 (46%), Gaps = 38/391 (9%)
Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
+ ++++F +G + RA +F + K + DN + III+ + G V A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
M + + E G +DV +Y ++++ + EA ++F +M E G P T+ +++
Sbjct: 194 NMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF 253
Query: 251 CKDGN-MNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM-EKANKLWADMISRKISP 308
K G NK +L + M I PD TYNTLI CK G + ++A +++ +M + S
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSY 312
Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
+ ++Y L++ Y EA ++ EMV G P++V+ N++I Y R G +A E
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ------------------- 409
++M +G PD +Y TL++GF R ++ A ++ +M N
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 410 ----------------GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
GL PD++T+N +L F + G + + M G P+R T+
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
TLI+ + + ++A + ML G PD
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 158/325 (48%), Gaps = 37/325 (11%)
Query: 20 EMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKG 79
EM++ G P+ T+NTLI+AY R G E+A + M G+ P + TYN+++ L + G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 80 RCDRAKEVLDEMLQMGLSPDTATYNTLL-------------------------------- 107
+++++VL EM P+ TY +LL
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 108 --VESCRK-ENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
V C K + + EAE F E+ RG +PDI + ++++ I+ R + +A MK
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
G P Y ++ + R+ ++ ++ E+L KG D+++YNT++ CR + +A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDG 284
+F+EM G+ PD T+ T I + D +A+ + M + +P+ TYN+++DG
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Query: 285 FCKVGEMEKANKLWADMISRKISPN 309
+CK+ ++A D+ R + P+
Sbjct: 779 YCKLNRKDEAKLFVEDL--RNLDPH 801
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 271 bits (693), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 263/479 (54%), Gaps = 13/479 (2%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ ALCK++K+D AK L EM KG PD V+Y T+I++ C G ++E +L +
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AER 241
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P V YN+LINGLCK+ A E++ EM++ G+SP+ +Y+TL+ C + A
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 121 EIFCEMSRRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
+M +RG P+I + S+L+ G F R D ++ + ++ GL P+ V Y ++ G
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
+C +G +++A+ + M E GC ++ TY +++NG + L A ++N+ML G P+
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
+T ++ C+ +A +L +IM++++ P + T+N I G C G ++ A K++
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 300 DMISR-KISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
M + + PN ++Y L++G + EA+ L E+ +G++ + + NT++ G C +
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME--NQGLVPDVI 416
G A + + KM+ +G PD I+ N +I + ++ ++A ++ + + PDVI
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601
Query: 417 TYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
+Y ++ G CR D ++L RMI G+ P +T++ LIN + L + R HD+
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI----LDDIVRAHDQ 656
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 244/487 (50%), Gaps = 7/487 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+ L D ++DS + L +M+ +G + + ++I+ Y + G E A ++ + G
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P V YN +++ L + R V +M + G P+ TYN LL C+ + A+
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ EMS +G PD VS++T+I G + RE+ + P +Y +ING
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----REL-AERFEPVVSVYNALINGL 256
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ A ++ EM+EKG +V++Y+T++N LC + + A +ML+RG P+
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQK-SIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
YT ++L+ G G AL+L++ M + ++P++V YNTL+ GFC G + KA +++
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
M SPN +YG LING+ G + A +W +M+ G P +V +++ CR
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHS 436
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV-PDVITY 418
+A+ + M E P ++N I G +D A + +ME Q P+++TY
Sbjct: 437 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTY 496
Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
N +L G + R+ ++ + + +G+ STY TL++G + A + +M+
Sbjct: 497 NELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMV 556
Query: 479 RGFVPDD 485
G PD+
Sbjct: 557 DGKSPDE 563
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 246/497 (49%), Gaps = 23/497 (4%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ L +++I M +M++ G P+ TYN L+ A C+ ++ A +L+ MS KG
Sbjct: 152 VLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG 211
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P +Y ++I+ +C+ G +E+ + P + YN L+ C++ + A
Sbjct: 212 CCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYKGAF 266
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+ EM +G++P+++S+STLI + +GQ++ A + +M G P+ + ++ G
Sbjct: 267 ELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326
Query: 181 CRNGFVLEALKMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
G +AL + ++M+ G +VV YNT++ G C + +A +F+ M E G P+
Sbjct: 327 FLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN 386
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
T+ +LI+G K G+++ A+ +++ M P++V Y +++ C+ + ++A L
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKG-IKPTLVSCNTIIKGYCRS 358
M +P+ ++ I G C G + A +++ +M + P +V+ N ++ G ++
Sbjct: 447 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506
Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
+A ++ GV+ S +YNTL++G A LV KM G PD IT
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 419 NVILTGFCRQGRMHDSELIL---------WRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
N+I+ +C+QG+ + +L WR PD +YT +I G N ++
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWR-------PDVISYTNVIWGLCRSNCREDG 619
Query: 470 FRFHDEMLQRGFVPDDA 486
+ M+ G VP A
Sbjct: 620 VILLERMISAGIVPSIA 636
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 198/407 (48%), Gaps = 41/407 (10%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N LCK+H A + EM +KG+ P+ ++Y+TLIN C G +E AF + M +G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQ-MGLSPDTATYNTLLVESCRKENMSEA 119
P ++T +SL+ G +G A ++ ++M++ GL P+ YNTL+ C N+ +A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIING 179
+F M G +P+I ++ +LI F++ G LD A+ + +M ++G P+ V+YT ++
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 180 YCRNGFVLEALKMRDEMLEKGCVMDV---------------------------------- 205
CR+ EA + + M ++ C V
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
Query: 206 --VTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
VTYN +L+GL +A + EA L E+ RGV T+ TL+HG C G AL L
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551
Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS---RKISPNYISYGILINGY 320
M PD +T N +I +CK G+ E+A ++ D++S RK P+ ISY +I G
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM-LDLVSCGRRKWRPDVISYTNVIWGL 610
Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
C + L M+ GI P++ + + +I + D+F
Sbjct: 611 CRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAHDQF 657
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 213/447 (47%), Gaps = 9/447 (2%)
Query: 42 REGFLEEAFQLMNSMSGKGL-KPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDT 100
+E + A S++ L K T+ +I L G+ D + +L +M G
Sbjct: 52 QESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSE 111
Query: 101 ATYNTLLVESCRKENMSE-AEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFR 159
+ ++ + R+ ++E A E+F + G P + ++ ++ ++ M +R
Sbjct: 112 DLFISV-ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 160 EMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAK 219
+MK G P+ Y +++ C+N V A K+ EM KGC D V+Y T+++ +C
Sbjct: 171 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYN 279
++ E +L E E P + LI+G CK+ + A L M +K I P++++Y+
Sbjct: 231 LVKEGREL-AERFE----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 280 TLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV-G 338
TLI+ C G++E A M+ R PN + L+ G G +A LW +M+ G
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDK 398
G++P +V+ NT+++G+C G+ KA S M G P+ +Y +LINGF + ++D
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 399 AFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLIN 458
A + +KM G P+V+ Y ++ CR + ++E ++ M ++ P T+ I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 459 GHVSQNNLKEAFRFHDEMLQRGFVPDD 485
G L A + +M Q+ P +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPN 492
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/511 (29%), Positives = 263/511 (51%), Gaps = 27/511 (5%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ + K+ +++ +M G+ P T T+N LI A C ++ A +L + M KG
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP FT+ L+ G CK G D+ E+L+ M G+ P+ YNT++ CR+ ++E
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMK---SAGLV-PDNVLYTII 176
++ +M G+ PDIV+F++ I + G++ A F +M+ GL P+++ Y ++
Sbjct: 238 KMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297
Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
+ G+C+ G + +A + + + E + + +YN L GL R EA+ + +M ++G+
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357
Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
P Y++ L+ G CK G ++ A + +M + + PD VTY L+ G+C VG+++ A
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYC 356
L +M+ PN + IL++ MG ++EA L +M KG V+CN I+ G C
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 357 RSGDASKADEFLSKMVSEG--------------VD---------PDSISYNTLINGFVRE 393
SG+ KA E + M G VD PD I+Y+TL+NG +
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
+A L ++M + L PD + YN+ + FC+QG++ + +L M +KG + TY
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+LI G +N + E DEM ++G P+
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 263/511 (51%), Gaps = 27/511 (5%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ ALC +D+A+ EM +KG P+ T+ L+ YC+ G ++ +L+N+M G
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG 212
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ P YN++++ C++GR D +++++++M + GL PD T+N+ + C++ + +A
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272
Query: 121 EIFCEMSRR---GVA-PDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTII 176
IF +M G+ P+ ++++ ++ F + G L+ A F ++ + Y I
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332
Query: 177 INGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGV 236
+ G R+G +EA + +M +KG + +YN +++GLC+ ML++A + M GV
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 237 FPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANK 296
PD T+ L+HG+C G ++ A +L M + + P+ T N L+ K+G + +A +
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 297 LWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIK-------------- 342
L M + + ++ I+++G C G + +A + M G
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512
Query: 343 ---------PTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVRE 393
P L++ +T++ G C++G ++A ++M+ E + PDS++YN I+ F ++
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 394 ENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTY 453
+ AF ++ ME +G + TYN ++ G + ++ + ++ M EKG++P+ TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 454 TTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
T I +++A DEM+Q+ P+
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 231/480 (48%), Gaps = 27/480 (5%)
Query: 28 PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
P YN L+ + +E +E L M G+ P +T+N LI LC D A+E+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 88 LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
DEM + G P+ T+ L+ C+ + E+ M GV P+ V ++T++ F R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEM-LEKGCVM--- 203
G+ D + +M+ GLVPD V + I+ C+ G VL+A ++ +M L++ +
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
+ +TYN +L G C+ +L +A LF + E ++ + G + G +A +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSM 323
MT K I P I +YN L+DG CK+G + A + M + P+ ++YG L++GYCS+
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 324 GHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISY 383
G V A L EM+ P +CN ++ + G S+A+E L KM +G D+++
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 384 NTLINGFVREENMDKAFALVSKMENQG-----------------------LVPDVITYNV 420
N +++G +DKA +V M G +PD+ITY+
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
+L G C+ GR +++ + M+ + L PD Y I+ Q + AFR +M ++G
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 257/544 (47%), Gaps = 65/544 (11%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+V CK D L ME GV P+ V YNT+++++CREG +++ +++ M +G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEV-----LDEMLQMGLSPDTATYNTLLVESCR--- 112
L P + T+NS I+ LCK+G+ A + LDE L + P++ TYN +L C+
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP-RPNSITYNLMLKGFCKVGL 306
Query: 113 -----------KEN---------------------MSEAEEIFCEMSRRGVAPDIVSFST 140
+EN EAE + +M+ +G+ P I S++
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
L+ + G L A MK G+ PD V Y +++GYC G V A + EM+
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
C+ + T N +L+ L + ++EA++L +M E+G D T ++ G C G ++KA+
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 261 NLF-----------------------DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKL 297
+ D + + + PD++TY+TL++G CK G +A L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 298 WADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCR 357
+A+M+ K+ P+ ++Y I I+ +C G ++ AFR+ +M KG +L + N++I G
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 358 SGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVIT 417
+ + +M +G+ P+ +YNT I E ++ A L+ +M + + P+V +
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666
Query: 418 YNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
+ ++ FC+ ++ + + Y+ + N ++ L +A + +L
Sbjct: 667 FKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVL 725
Query: 478 QRGF 481
RGF
Sbjct: 726 DRGF 729
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 208/438 (47%), Gaps = 24/438 (5%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ LCK + AK + M++ GV PD VTY L++ YC G ++ A L+ M
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P +T N L++ L K GR A+E+L +M + G DT T N ++ C + +A
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 121 EIFCEMSRRGVA-----------------------PDIVSFSTLIGIFSRNGQLDRALMY 157
EI M G A PD++++STL+ + G+ A
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 158 FREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCR 217
F EM L PD+V Y I I+ +C+ G + A ++ +M +KGC + TYN+++ GL
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 218 AKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVT 277
+ E L +EM E+G+ P+ T+ T I C+ + A NL D M QK+I P++ +
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666
Query: 278 YNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMV 337
+ LI+ FCKV + + A +++ +S + Y ++ N + G + +A L ++
Sbjct: 667 FKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL-YSLMFNELLAAGQLLKATELLEAVL 725
Query: 338 GKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMD 397
+G + +++ C+ + A L KM+ G D + +I+G + N
Sbjct: 726 DRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKK 785
Query: 398 KAFALVSKMENQGLVPDV 415
+A + KM V +V
Sbjct: 786 EANSFADKMMEMASVGEV 803
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 204/401 (50%), Gaps = 17/401 (4%)
Query: 95 GLSPD-TATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDR 153
G+S D T T +LV + E + E + S + + S +++ IF+++ +D+
Sbjct: 36 GISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTK--LSSLLSVVSIFAKSNHIDK 93
Query: 154 ALMYFREMKSAGLVPDN----VLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYN 209
A F+ ++S P+N LY +++ + V + +M+ G T+N
Sbjct: 94 AFPQFQLVRSR--FPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFN 151
Query: 210 TILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK 269
++ LC + + A +LF+EM E+G P+ +TF L+ G+CK G +K L L + M
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211
Query: 270 SIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEA 329
+ P+ V YNT++ FC+ G + + K+ M + P+ +++ I+ C G V +A
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 330 FRLWYEM-----VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSI-SY 383
R++ +M +G +P ++ N ++KG+C+ G A + L + + E D S+ SY
Sbjct: 272 SRIFSDMELDEYLGLP-RPNSITYNLMLKGFCKVGLLEDA-KTLFESIRENDDLASLQSY 329
Query: 384 NTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIE 443
N + G VR +A ++ +M ++G+ P + +YN+++ G C+ G + D++ I+ M
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 444 KGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
G+ PD TY L++G+ S + A EM++ +P+
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 344 TLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS-YNTLINGFVREENMDKAFAL 402
+L + TI + R+ + E + ++S + +S ++++ F + ++DKAF
Sbjct: 38 SLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQ 97
Query: 403 VSKM-----ENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
+ EN+ P V YN++L ++ R+ + M+ G+ P T+ LI
Sbjct: 98 FQLVRSRFPENK---PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLI 154
Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
+ + A DEM ++G P++
Sbjct: 155 RALCDSSCVDAARELFDEMPEKGCKPNE 182
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 217/376 (57%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ C+ ++ A L +M + G P VT+ +L++ +C + +AF L+ M G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P V YN+LI+GLCK G + A E+L+EM + GL D TYNTLL C S+A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M +R + PD+V+F+ LI +F + G LD A ++EM + + P+NV Y IING
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C +G + +A K D M KGC +VVTYNT+++G C+ +M+ E LF M G D
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+ TLIHG+C+ G + AL++F M + + PDI+T+ L+ G C GE+E A + D
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M + ++Y I+I+G C V +A+ L+ + +G+KP + +I G C++G
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471
Query: 361 ASKADEFLSKMVSEGV 376
+ADE + +M EG+
Sbjct: 472 RREADELIRRMKEEGI 487
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/443 (30%), Positives = 224/443 (50%), Gaps = 9/443 (2%)
Query: 42 REGFL-----EEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGL 96
R GFL E+AF L M P + + L+ R + +M G+
Sbjct: 43 RTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGI 102
Query: 97 SPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALM 156
S D ++ L+ CR +S A + +M + G P IV+F +L+ F ++ A
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 157 YFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLC 216
M +G P+ V+Y +I+G C+NG + AL++ +EM +KG DVVTYNT+L GLC
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 217 RAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIV 276
+ ++A + +M++R + PD TFT LI K GN+++A L+ M Q S+ P+ V
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 277 TYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEM 336
TYN++I+G C G + A K + M S+ PN ++Y LI+G+C V E +L+ M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 337 VGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENM 396
+G + + NT+I GYC+ G A + MVS V PD I++ L++G +
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 397 DKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTL 456
+ A M ++ YN+++ G C+ ++ + + R+ +G+ PD TYT +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 457 INGHVSQNNLKEAFRFHDEMLQR 479
I G +EA DE+++R
Sbjct: 463 ILGLCKNGPRREA----DELIRR 481
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 224/412 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ A + ++ F +ME G+ D ++ LI+ +CR L A ++ M G
Sbjct: 77 LLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG 136
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T+ SL++G C R A ++ M++ G P+ YNTL+ C+ ++ A
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+ EM ++G+ D+V+++TL+ +G+ A R+M + PD V +T +I+ +
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G + EA ++ EM++ + VTYN+I+NGLC L +A F+ M +G FP+
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLI G CK +++ + LF M+ + DI TYNTLI G+C+VG++ A ++
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+SR+++P+ I++ IL++G C G + A + +M +V+ N +I G C++
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLV 412
KA E ++ EGV PD+ +Y +I G + +A L+ +M+ +G++
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 228/455 (50%)
Query: 10 KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
+ + A EM P V + L+ A E M G+ ++++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 70 SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
LI+ C+ R A VL +M+++G P T+ +LL C + +A + M +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
G P++V ++TLI +NG+L+ AL EM+ GL D V Y ++ G C +G +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
+M +M+++ DVVT+ +++ + L EA +L+ EM++ V P+ T+ ++I+G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
C G + A FD+M K P++VTYNTLI GFCK +++ KL+ M + +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
+Y LI+GYC +G + A ++ MV + + P +++ ++ G C +G+ A
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
M ++YN +I+G + + ++KA+ L ++ +G+ PD TY +++ G C+ G
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQN 464
+++ ++ RM E+G+ + + H S N
Sbjct: 471 PRREADELIRRMKEEGIICQMNAEDDHLEEHSSSN 505
Score = 198 bits (503), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 204/414 (49%)
Query: 71 LINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRG 130
L G R + A + EM+ P + LL + +M G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 131 VAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEAL 190
++ D+ SF+ LI F R +L AL +M G P V + +++G+C + +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 191 KMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGH 250
+ M++ G +VV YNT+++GLC+ L A +L NEM ++G+ D T+ TL+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 251 CKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNY 310
C G + A + M ++SI PD+VT+ LID F K G +++A +L+ +MI + PN
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 311 ISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSK 370
++Y +ING C G + +A + + M KG P +V+ NT+I G+C+ + + +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 371 MVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGR 430
M EG + D +YNTLI+G+ + + A + M ++ + PD+IT+ ++L G C G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 431 MHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+ + + M E Y +I+G + +++A+ + G PD
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 118/228 (51%)
Query: 259 ALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILIN 318
A LF M P IV + L+ + E M IS + S+ ILI+
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 319 GYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDP 378
+C ++ A + +M+ G +P++V+ +++ G+C A + MV G +P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 379 DSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELIL 438
+ + YNTLI+G + ++ A L+++ME +GL DV+TYN +LTG C GR D+ +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 439 WRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
M+++ +NPD T+T LI+ V Q NL EA + EM+Q P++
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 265 bits (677), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 145/442 (32%), Positives = 247/442 (55%), Gaps = 4/442 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ A+ K ++ K L +M++ G+ P+ VTYN L+ YC+ G L+EAFQ++ M
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMS-EA 119
+ P + TYN LINGLC G E++D M + L PD TYNTL ++ C + +S EA
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL-IDGCFELGLSLEA 364
Query: 120 EEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKS-AGLVPDNVLYTIIIN 178
++ +M GV + V+ + + + + + +E+ G PD V Y +I
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 179 GYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFP 238
Y + G + AL+M EM +KG M+ +T NTIL+ LC+ + L EA +L N +RG
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 239 DFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLW 298
D T+ TLI G ++ + KAL ++D M + I P + T+N+LI G C G+ E A + +
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 299 ADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRS 358
++ + P+ ++ +I GYC G V +AF + E + KP +CN ++ G C+
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
G KA F + ++ E + D+++YNT+I+ F +++ + +A+ L+S+ME +GL PD TY
Sbjct: 605 GMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Query: 419 NVILTGFCRQGRMHDSELILWR 440
N ++ G++ +++ +L +
Sbjct: 664 NSFISLLMEDGKLSETDELLKK 685
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 245/476 (51%), Gaps = 3/476 (0%)
Query: 11 IDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK-GLKPGVFTYN 69
I SA+ +M + GV + T+N L+N YC EG LE+A ++ M + + P TYN
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 70 SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
+++ + KKGR KE+L +M + GL P+ TYN L+ C+ ++ EA +I M +
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
V PD+ +++ LI G + L MKS L PD V Y +I+G G LEA
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLE-RGVFPDFYTFTTLIH 248
K+ ++M G + VT+N L LC+ + E+++ G PD T+ TLI
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 249 GHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISP 308
+ K G+++ AL + M QK IK + +T NT++D CK ++++A+ L R
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 309 NYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFL 368
+ ++YG LI G+ V +A +W EM I PT+ + N++I G C G A E
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 369 SKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQ 428
++ G+ PD ++N++I G+ +E ++KAF ++ PD T N++L G C++
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 429 GRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
G M + L + + + D TY T+I+ LKEA+ EM ++G PD
Sbjct: 605 G-MTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Score = 238 bits (607), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 240/463 (51%), Gaps = 5/463 (1%)
Query: 28 PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRC---DRA 84
P ++ ++AY EG A Q+ M LKP + T N+L+ GL + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 85 KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM-SRRGVAPDIVSFSTLIG 143
+EV D+M+++G+S + T+N L+ C + + +A + M S V PD V+++T++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 144 IFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVM 203
S+ G+L +MK GLVP+ V Y ++ GYC+ G + EA ++ + M + +
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 204 DVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLF 263
D+ TYN ++NGLC A + E +L + M + PD T+ TLI G + G +A L
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 264 DIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMIS-RKISPNYISYGILINGYCS 322
+ M +K + VT+N + CK + E + +++ SP+ ++Y LI Y
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
+G ++ A + EM KGIK ++ NTI+ C+ +A L+ G D ++
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
Y TLI GF REE ++KA + +M+ + P V T+N ++ G C G+ + +
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDD 485
E GL PD ST+ ++I G+ + +++AF F++E ++ F PD+
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 180/375 (48%), Gaps = 37/375 (9%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N LC + + M+ + PD VTYNTLI+ G EA +LM M G
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375
Query: 61 LK------------------------------------PGVFTYNSLINGLCKKGRCDRA 84
+K P + TY++LI K G A
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGA 435
Query: 85 KEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGI 144
E++ EM Q G+ +T T NT+L C++ + EA + +RG D V++ TLI
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Query: 145 FSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMD 204
F R ++++AL + EMK + P + +I G C +G A++ DE+ E G + D
Sbjct: 496 FFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Query: 205 VVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFD 264
T+N+I+ G C+ + +A + +NE ++ PD YT L++G CK+G KALN F+
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 265 IMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMG 324
+ ++ + D VTYNT+I FCK ++++A L ++M + + P+ +Y I+ G
Sbjct: 616 TLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG 674
Query: 325 HVTEAFRLWYEMVGK 339
++E L + GK
Sbjct: 675 KLSETDELLKKFSGK 689
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 6 CKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGV 65
CK+ +++ A F E + PD T N L+N C+EG E+A N++ + +
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDT 625
Query: 66 FTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCE 125
TYN++I+ CK + A ++L EM + GL PD TYN+ + +SE +E+
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL--- 682
Query: 126 MSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGF 185
+ FS G R+ Q++ L + + Y+ +I+ C G
Sbjct: 683 ---------LKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGR 733
Query: 186 VLE 188
+ E
Sbjct: 734 LKE 736
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 23/103 (22%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
M++A CKD K+ A L EME+KG+ PD TYN+ I+ +G L E +L+ SGK
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKF 690
Query: 60 ----------------------GLKPGVFTYNSLINGLCKKGR 80
L Y+ +I+ LC +GR
Sbjct: 691 GSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGR 733
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 243/441 (55%), Gaps = 8/441 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K +K D F +ME G+ + TYN LIN +CR L A L+ M G
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T NSL+NG C R A ++D+M++MG PDT T+ TL+ SEA
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M +RG PD+V++ ++ + G D AL +M++A + + V+Y+ +I+
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C+ +AL + EM KG +V+TY+++++ LC ++A L ++M+ER + P+
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
TF+ LI K G + KA L++ M ++SI P+I TY++LI+GFC + + +A ++
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
MI + PN ++Y LING+C V + L+ EM +G+ V+ T+I G+ ++ D
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
A +MVS GV P+ ++YN L++G + + KA + ++ + PD+ TYN+
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 421 ILTGFCRQGRMHDSELILWRM 441
++ G C+ G+ W+M
Sbjct: 504 MIEGMCKAGK--------WKM 516
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 244/453 (53%), Gaps = 2/453 (0%)
Query: 8 DHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFT 67
D ++D A M Q +P + ++ L++A + + M G+ ++T
Sbjct: 56 DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115
Query: 68 YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
YN LIN C+ R A +L +M+++G PD T N+LL C +S+A + +M
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 128 RRGVAPDIVSFSTLI-GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
G PD V+F+TLI G+F N + A+ M G PD V Y ++NG C+ G
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHN-KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
AL + ++M +VV Y+T+++ LC+ + +A +LF EM +GV P+ T+++L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
I C G + A L M ++ I P++VT++ LID F K G++ KA KL+ +MI R I
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
PN +Y LING+C + + EA ++ M+ K P +V+ NT+I G+C++ K E
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
+M G+ ++++Y TLI+GF + + D A + +M + G+ P+++TYN++L G C
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLING 459
+ G++ + ++ + + PD TY +I G
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 241/442 (54%), Gaps = 1/442 (0%)
Query: 46 LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
L++A L M+ P + ++ L++ + K + D ++M +G+S + TYN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
L+ CR +S A + +M + G PDIV+ ++L+ F ++ A+ +M G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
PD V +T +I+G + EA+ + D M+++GC D+VTY ++NGLC+ A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
+L N+M + + ++T+I CK + + ALNLF M K ++P+++TY++LI
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
C G A++L +DMI RKI+PN +++ LI+ + G + +A +L+ EM+ + I P +
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
+ +++I G+C +A + L M+ + P+ ++YNTLINGF + + +DK L +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
M +GLV + +TY ++ GF + +++++ +M+ G++P+ TY L++G
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 466 LKEAFRFHDEMLQRGFVPDDAF 487
L +A E LQR + D +
Sbjct: 479 LAKAMVVF-EYLQRSTMEPDIY 499
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 119/244 (48%)
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
Y + ++ D ++ A+ LF +M Q P I+ ++ L+ K+ + +
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M IS N +Y ILIN +C ++ A L +M+ G +P +V+ N+++ G+C
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
S A + +MV G PD++++ TLI+G +A AL+ +M +G PD++TY
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRG 480
++ G C++G + +L +M + + Y+T+I+ + +A EM +G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 481 FVPD 484
P+
Sbjct: 284 VRPN 287
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C ++ AK L M +K P+ VTYNTLIN +C+ +++ +L MS +G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
L TY +LI+G + CD A+ V +M+ +G+ P+ TYN LL C+ +++A
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
+F + R + PDI +++ +I + G+ +YF
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/465 (30%), Positives = 255/465 (54%)
Query: 23 QKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCD 82
+ Y + Y ++ R L+++ L M P + ++ L++ + K + D
Sbjct: 39 SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 83 RAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLI 142
+ ++M +G+ + T N LL CR +S A +M + G P IV+F +L+
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 143 GIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
F R ++ AL F +M G P+ V+Y II+G C++ V AL + + M + G
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
DVVTYN++++GLC + ++A + + M +R ++PD +TF LI K+G +++A
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCS 322
++ M ++S+ PDIVTY+ LI G C +++A +++ M+S+ P+ ++Y ILINGYC
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 323 MGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSIS 382
V +L+ EM +G+ V+ +I+GYCR+G + A+E +MV GV P+ I+
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 383 YNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMI 442
YN L++G ++KA +++ M+ G+ D++TYN+I+ G C+ G + D+ I +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 443 EKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDAF 487
+GL PD TYTT++ G + +EA +M + G +P++ +
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECY 503
Score = 249 bits (636), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 215/379 (56%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C+ ++ A FL +M + G P VT+ +L+N +CR + +A + + M G G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP V YN++I+GLCK + D A ++L+ M + G+ PD TYN+L+ C S+A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ M++R + PD+ +F+ LI + G++ A ++ EM L PD V Y+++I G
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C + EA +M M+ KGC DVVTY+ ++NG C++K + LF EM +RGV +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+T LI G+C+ G +N A +F M + P+I+TYN L+ G C G++EKA + AD
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M + + ++Y I+I G C G V +A+ ++ + +G+ P + + T++ G + G
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 361 ASKADEFLSKMVSEGVDPD 379
+AD KM +G+ P+
Sbjct: 482 RREADALFRKMKEDGILPN 500
Score = 239 bits (610), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 225/414 (54%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K K D +M+ G+ + T N L+N +CR L A + M G
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T+ SL+NG C+ R A + D+M+ MG P+ YNT++ C+ + + A
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ M + G+ PD+V++++LI +G+ A M + PD + +I+
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G V EA + +EM+ + D+VTY+ ++ GLC L EA+++F M+ +G FPD
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T++ LI+G+CK + + LF M+Q+ + + VTY LI G+C+ G++ A +++
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+ + PN I+Y +L++G C G + +A + +M G+ +V+ N II+G C++G+
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
+ A + + +G+ PD +Y T++ G ++ +A AL KM+ G++P+
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 238 bits (607), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 232/438 (52%), Gaps = 1/438 (0%)
Query: 12 DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
DS +F M Q P ++ L++A + + L M G+ + T N L
Sbjct: 64 DSLDLFF-HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 72 INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
+N C+ + A L +M+++G P T+ +LL CR + + +A +F +M G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
P++V ++T+I ++ Q+D AL M+ G+ PD V Y +I+G C +G +A +
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
M M ++ DV T+N +++ + ++EA++ + EM+ R + PD T++ LI+G C
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
+++A +F M K PD+VTY+ LI+G+CK ++E KL+ +M R + N +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
+Y ILI GYC G + A ++ MV G+ P +++ N ++ G C +G KA L+ M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
G+D D ++YN +I G + + A+ + + QGL+PD+ TY ++ G ++G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 432 HDSELILWRMIEKGLNPD 449
+++ + +M E G+ P+
Sbjct: 483 READALFRKMKEDGILPN 500
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 234/419 (55%), Gaps = 1/419 (0%)
Query: 68 YNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMS 127
Y +IN + + + +EM+ G P + +N LL + ++ F E +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 128 RRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVL 187
+ V D+ SF LI G+++++ E+ G P+ V+YT +I+G C+ G +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 188 EALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLI 247
+A + EM + G V + TY ++NGL + + + +++ +M E GVFP+ YT+ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 248 HGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKIS 307
+ CKDG A +FD M ++ + +IVTYNTLI G C+ ++ +ANK+ M S I+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
PN I+Y LI+G+C +G + +A L ++ +G+ P+LV+ N ++ G+CR GD S A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
+ +M G+ P ++Y LI+ F R +NM+KA L ME GLVPDV TY+V++ GFC
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
+G+M+++ + M+EK P+ Y T+I G+ + + A + EM ++ P+ A
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 253/466 (54%), Gaps = 5/466 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N+ + ++ + + EM G P + +N L+ + + N K
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK- 158
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+ V+++ LI G C+ G +++ ++L E+ + G SP+ Y TL+ C+K + +A+
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++F EM + G+ + +++ LI +NG + + +M+ G+ P+ Y ++N
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C++G +A ++ DEM E+G ++VTYNT++ GLCR L EA+ + ++M G+ P+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLI G C G + KAL+L + + + P +VTYN L+ GFC+ G+ A K+ +
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R I P+ ++Y ILI+ + ++ +A +L M G+ P + + + +I G+C G
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
++A MV + +P+ + YNT+I G+ +E + +A L+ +ME + L P+V +Y
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 421 ILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI----NGHVS 462
++ C++ + ++E ++ +MI+ G++P S + + + HVS
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHVS 564
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 246/454 (54%), Gaps = 1/454 (0%)
Query: 33 YNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEML 92
Y +IN+Y + L + N M G PG +N L+ + ++ +E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 93 QMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLD 152
+ + D ++ L+ C + ++ ++ E++ G +P++V ++TLI + G+++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 153 RALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTIL 212
+A F EM GLV + YT++ING +NG + +M ++M E G ++ TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 213 NGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK 272
N LC+ +A +F+EM ERGV + T+ TLI G C++ +N+A + D M I
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 273 PDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRL 332
P+++TYNTLIDGFC VG++ KA L D+ SR +SP+ ++Y IL++G+C G + A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 333 WYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVR 392
EM +GIKP+ V+ +I + RS + KA + M G+ PD +Y+ LI+GF
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 393 EENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRST 452
+ M++A L M + P+ + YN ++ G+C++G + + +L M EK L P+ ++
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 453 YTTLINGHVSQNNLKEAFRFHDEMLQRGFVPDDA 486
Y +I + KEA R ++M+ G P +
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 184/348 (52%), Gaps = 36/348 (10%)
Query: 172 LYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEM 231
LY +IIN Y ++ + ++ +EM++ G V +N +L + + + FNE
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 232 LERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEM 291
+ V D Y+F LI G C+ G + K+ +L +T+ P++V Y TLIDG CK GE+
Sbjct: 156 KSKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 292 EKANKLWADMISRKISPNYISYGILING-------------------------------- 319
EKA L+ +M + N +Y +LING
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 320 ---YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGV 376
C G +AF+++ EM +G+ +V+ NT+I G CR ++A++ + +M S+G+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 377 DPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSEL 436
+P+ I+YNTLI+GF + KA +L ++++GL P ++TYN++++GFCR+G +
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 437 ILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
++ M E+G+ P + TYT LI+ +N+++A + M + G VPD
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 19/284 (6%)
Query: 220 MLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIM-----TQKSIKPD 274
+ + A L +++ + F+T ++L+H + L++++ +S+
Sbjct: 54 LFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLS 113
Query: 275 IVTYNTLID-GFCK-----------VGEMEKANKLWA--DMISRKISPNYISYGILINGY 320
I +N ++D GF V N+ W+ + K+ + S+GILI G
Sbjct: 114 ISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGC 173
Query: 321 CSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDS 380
C G + ++F L E+ G P +V T+I G C+ G+ KA + +M G+ +
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233
Query: 381 ISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWR 440
+Y LING + + F + KM+ G+ P++ TYN ++ C+ GR D+ +
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 441 MIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
M E+G++ + TY TLI G + L EA + D+M G P+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 261 bits (668), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 155/491 (31%), Positives = 243/491 (49%), Gaps = 22/491 (4%)
Query: 10 KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
++ K L M +G YP +N+L++AYC G A++L+ M G PG YN
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411
Query: 70 SLINGLCKKG---RCDR---AKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
LI +C CD A++ EML G+ + ++ C +A +
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471
Query: 124 CEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRN 183
EM +G PD ++S ++ +++ A + F EMK GLV D YTI+++ +C+
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 184 GFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTF 243
G + +A K +EM E GC +VVTY +++ +AK ++ A++LF ML G P+ T+
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 244 TTLIHGHCKDGNMNKALNLFDIMT----------------QKSIKPDIVTYNTLIDGFCK 287
+ LI GHCK G + KA +F+ M S +P++VTY L+DGFCK
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 288 VGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVS 347
+E+A KL M PN I Y LI+G C +G + EA + EM G TL +
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 348 CNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKME 407
+++I Y + A + LSKM+ P+ + Y +I+G + D+A+ L+ ME
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 408 NQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLK 467
+G P+V+TY ++ GF G++ +L RM KG+ P+ TY LI+ L
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 468 EAFRFHDEMLQ 478
A +EM Q
Sbjct: 832 VAHNLLEEMKQ 842
Score = 244 bits (624), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 154/538 (28%), Positives = 249/538 (46%), Gaps = 60/538 (11%)
Query: 4 ALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKP 63
+LCK K A L +E + PDTV Y LI+ C EEA +N M P
Sbjct: 279 SLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 64 GVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIF 123
V TY++L+ G K + R K VL+ M+ G P +N+L+ C + S A ++
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 124 CEMSRRGVAPDIVSFSTLIG-------------------------------------IFS 146
+M + G P V ++ LIG F+
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 147 R----NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCV 202
R G+ ++A REM G +PD Y+ ++N C + A + +EM G V
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 203 MDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNL 262
DV TY +++ C+A ++ +A FNEM E G P+ T+T LIH + K ++ A L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 263 FDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRK----------------I 306
F+ M + P+IVTY+ LIDG CK G++EKA +++ M K
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
PN ++YG L++G+C V EA +L M +G +P + + +I G C+ G +A E
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
++M G +Y++LI+ + + + D A ++SKM P+V+ Y ++ G C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+ G+ ++ ++ M EKG P+ TYT +I+G ++ + M +G P+
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 244/498 (48%), Gaps = 20/498 (4%)
Query: 5 LCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPG 64
LC K + A + EM +G PDT TY+ ++N C +E AF L M GL
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 65 VFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFC 124
V+TY +++ CK G ++A++ +EM ++G +P+ TY L+ + + +S A E+F
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 125 EMSRRGVAPDIVSFSTLIGIFSRNGQLDRAL----------------MYFREMKSAGLVP 168
M G P+IV++S LI + GQ+++A MYF++ P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 169 DNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLF 228
+ V Y +++G+C++ V EA K+ D M +GC + + Y+ +++GLC+ L EA ++
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 229 NEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKV 288
EM E G YT+++LI + K + A + M + S P++V Y +IDG CKV
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 289 GEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSC 348
G+ ++A KL M + PN ++Y +I+G+ +G + L M KG+ P V+
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 349 NTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMEN 408
+I C++G A L +M + Y +I GF +E ++ L+ ++
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQ 875
Query: 409 QGLVPDVITYNVILTGFCRQGRMHDSELILWRM--IEKGLNPDRSTYTTLINGHVSQNNL 466
P + Y +++ + R+ + +L + L STY +LI N +
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 935
Query: 467 KEAFRFHDEMLQRGFVPD 484
+ AF+ EM ++G +P+
Sbjct: 936 ETAFQLFSEMTKKGVIPE 953
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/546 (24%), Positives = 231/546 (42%), Gaps = 89/546 (16%)
Query: 28 PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLK------------------------- 62
P TYN LI A+ + L+ A + MS L+
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 63 -------PGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKEN 115
P Y LI+GLC+ + A + L+ M P+ TY+TLL K+
Sbjct: 293 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352
Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
+ + + M G P F++L+ + +G A ++M G +P V+Y I
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 412
Query: 176 IINGYCRN----------------------GFVL-------------------EALKMRD 194
+I C + G VL +A +
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 195 EMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDG 254
EM+ +G + D TY+ +LN LC A + A LF EM G+ D YT+T ++ CK G
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 255 NMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYG 314
+ +A F+ M + P++VTY LI + K ++ AN+L+ M+S PN ++Y
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 315 ILINGYCSMGHVTEAFRLWYEMVGK----------------GIKPTLVSCNTIIKGYCRS 358
LI+G+C G V +A +++ M G +P +V+ ++ G+C+S
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 359 GDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITY 418
+A + L M EG +P+ I Y+ LI+G + +D+A + ++M G + TY
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 419 NVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQ 478
+ ++ + + R + +L +M+E P+ YT +I+G EA++ M +
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 479 RGFVPD 484
+G P+
Sbjct: 773 KGCQPN 778
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 194/426 (45%), Gaps = 54/426 (12%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGK- 59
+++A K K+ A M +G P+ VTY+ LI+ +C+ G +E+A Q+ M G
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 60 ---------------GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYN 104
+P V TY +L++G CK R + A+++LD M G P+ Y+
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 105 TLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSA 164
L+ C+ + EA+E+ EMS G + ++S+LI + + + D A +M
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 165 GLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEA 224
P+ V+YT +I+G C+ G EA K+ M EKGC +VVTY +++G +
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 225 DDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQK--------------- 269
+L M +GV P++ T+ LI CK+G ++ A NL + M Q
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Query: 270 ------------------SIKPDIVTYNTLIDGFCKVGEMEKANKLWADM--ISRKISPN 309
P + Y LID K +E A +L ++ S +
Sbjct: 859 FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKA---DE 366
+Y LI C V AF+L+ EM KG+ P + S ++IKG R+ S+A +
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Query: 367 FLSKMV 372
F+S MV
Sbjct: 979 FISHMV 984
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 196/435 (45%), Gaps = 17/435 (3%)
Query: 60 GLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATY----NTLLVESCRKEN 115
G K YN+L++ + + D ++V +E LQ D + N L+ + CR +
Sbjct: 160 GYKHTAPVYNALVDLIVR----DDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGS 215
Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
S A E + P +++ LI F + +LD A + REM A L D
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275
Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
C+ G EAL + + + V D V Y +++GLC A + EA D N M
Sbjct: 276 FAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
P+ T++TL+ G + + + ++M + P +N+L+ +C G+ A
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392
Query: 296 KLWADMISRKISPNYISYGILINGYC------SMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
KL M+ P Y+ Y ILI C + + A + + EM+ G+ ++ +
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452
Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
+ + C +G KA + +M+ +G PD+ +Y+ ++N M+ AF L +M+
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
GLV DV TY +++ FC+ G + + M E G P+ TYT LI+ ++ + A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 470 FRFHDEMLQRGFVPD 484
+ ML G +P+
Sbjct: 573 NELFETMLSEGCLPN 587
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 206/477 (43%), Gaps = 15/477 (3%)
Query: 17 FLCEMEQKGVYPDTVTYNTLINAYCR---EGFLEEAFQLMNSMSGKGLKPGVFTYNSLIN 73
F+ Q G YN L++ R E EE Q + + G F N L+
Sbjct: 152 FVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVF--GEFL-NVLVR 208
Query: 74 GLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAP 133
C+ G A E L + P +TYN L+ + + + A I EMS +
Sbjct: 209 KHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRM 268
Query: 134 DIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMR 193
D + + G+ AL +++ VPD V YT +I+G C EA+
Sbjct: 269 DGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
Query: 194 DEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKD 253
+ M C+ +VVTY+T+L G K L + N M+ G +P F +L+H +C
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385
Query: 254 GNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGE------MEKANKLWADMISRKIS 307
G+ + A L M + P V YN LI C + ++ A K +++M++ +
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
Query: 308 PNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEF 367
N I+ CS G +AF + EM+G+G P + + ++ C + A
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 368 LSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCR 427
+M G+ D +Y +++ F + +++A ++M G P+V+TY ++ + +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 428 QGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
++ + + M+ +G P+ TY+ LI+GH +++A + + M VPD
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 262/516 (50%), Gaps = 33/516 (6%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ LCK +++ A+ EM + + P +TYNTLI+ YC+ G E++F++ M
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
++P + T+N+L+ GL K G + A+ VL EM +G PD T++ L E A
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++ GV + + S L+ + G++++A + GLVP+ V+Y +I+GY
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 181 CRNGFVLEALKMRDEMLEK-GCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPD 239
CR G ++ A +M+ E +EK G D + YN ++ C + A+ N+M +GV P
Sbjct: 400 CRKGDLVGA-RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458
Query: 240 FYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWA 299
T+ LI G+ + +K ++ M P++V+Y TLI+ CK ++ +A +
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
DM R +SP Y +LI+G CS G + +AFR EM+ KGI+ LV+ NT+I G +G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQG--------- 410
S+A++ L ++ +G+ PD +YN+LI+G+ N+ + AL +M+ G
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 411 ----------------------LVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNP 448
L PD++ YN +L + G M + + +MIEK +
Sbjct: 639 LLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 449 DRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
D++TY +LI G + L E DEM R P+
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 236/456 (51%)
Query: 28 PDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEV 87
P Y I A + + + +L N M + P VF YN LI+GLCK R + A+++
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 88 LDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSR 147
DEML L P TYNTL+ C+ N ++ ++ M + P +++F+TL+ +
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 148 NGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVT 207
G ++ A +EMK G VPD ++I+ +GY N AL + + ++ G M+ T
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 208 YNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMT 267
+ +LN LC+ + +A+++ + +G+ P+ + T+I G+C+ G++ A + M
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416
Query: 268 QKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVT 327
++ +KPD + YN LI FC++GEME A K M + +SP+ +Y ILI GY
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 328 EAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLI 387
+ F + EM G P +VS T+I C+ +A M GV P YN LI
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 388 NGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLN 447
+G + ++ AF +M +G+ +++TYN ++ G G++ ++E +L + KGL
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 448 PDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
PD TY +LI+G+ N++ ++EM + G P
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 245/441 (55%), Gaps = 4/441 (0%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++NALCK+ KI+ A+ L KG+ P+ V YNT+I+ YCR+G L A + +M +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+KP YN LI C+ G + A++ +++M G+SP TYN L+ RK +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+I EM G P++VS+ TLI + +L A + R+M+ G+ P +Y ++I+G
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C G + +A + EML+KG +++VTYNT+++GL L+EA+DL E+ +G+ PD
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+ +LI G+ GN+ + + L++ M + IKP + TY+ LI C +E +L+ +
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGE 658
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M + P+ + Y +++ Y G + +AF L +M+ K I + N++I G + G
Sbjct: 659 M---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+ + +M + ++P++ +YN ++ G ++ A+ +M+ +G + DV N
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNE 775
Query: 421 ILTGFCRQGRMHDSELILWRM 441
+++G + R ++E+++ M
Sbjct: 776 LVSGLKEEWRSKEAEIVISEM 796
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 250/485 (51%), Gaps = 6/485 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ L K ++ A+ L EM+ G PD T++ L + Y E A + + G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+K +T + L+N LCK+G+ ++A+E+L + GL P+ YNT++ CRK ++ A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
M ++G+ PD ++++ LI F G+++ A +MK G+ P Y I+I GY
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
R + + EM + G + +VV+Y T++N LC+ L EA + +M +RGV P
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+ LI G C G + A M +K I+ ++VTYNTLIDG G++ +A L +
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ + + P+ +Y LI+GY G+V L+ EM GIKPTL + + +I + G
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649
Query: 361 ASKADEFLSKMVSE-GVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
E ++ E + PD + YN +++ + +M+KAF L +M + + D TYN
Sbjct: 650 -----ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
++ G + G++ + ++ M + + P+ TY ++ GH + A+ ++ EM ++
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Query: 480 GFVPD 484
GF+ D
Sbjct: 765 GFLLD 769
Score = 225 bits (574), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 233/436 (53%)
Query: 46 LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
+ EA L ++ +G+ P + L++ L K + V +L+ P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
+ + + ++ + E+F M + P + ++ LI + +++ A F EM +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
L+P + Y +I+GYC+ G ++ K+R+ M ++T+NT+L GL +A M+ +A+
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
++ EM + G PD +TF+ L G+ + AL +++ +K + T + L++
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
CK G++EKA ++ +++ + PN + Y +I+GYC G + A M +G+KP
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
++ N +I+ +C G+ A++ ++KM +GV P +YN LI G+ R+ DK F ++ +
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
ME+ G +P+V++Y ++ C+ ++ +++++ M ++G++P Y LI+G S+
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 466 LKEAFRFHDEMLQRGF 481
+++AFRF EML++G
Sbjct: 545 IEDAFRFSKEMLKKGI 560
Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 236/473 (49%), Gaps = 1/473 (0%)
Query: 12 DSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSL 71
++A +F + +G+YP + + L++ + + ++ +P F Y
Sbjct: 127 EAADLFFA-LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 72 INGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGV 131
I K + E+ + M + P YN L+ C+ + M++AE++F EM R +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 132 APDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALK 191
P +++++TLI + + G +++ MK+ + P + + ++ G + G V +A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 192 MRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHC 251
+ EM + G V D T++ + +G + A ++ ++ GV + YT + L++ C
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 252 KDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYI 311
K+G + KA + K + P+ V YNT+IDG+C+ G++ A M + + P+++
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 312 SYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKM 371
+Y LI +C +G + A + +M KG+ P++ + N +I GY R + K + L +M
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 372 VSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRM 431
G P+ +SY TLIN + + +A + ME++G+ P V YN+++ G C +G++
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 432 HDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
D+ M++KG+ + TY TLI+G L EA E+ ++G PD
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 188/369 (50%)
Query: 116 MSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTI 175
+SEA ++F + G+ P S + L+ + Q + F + + P +Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 176 IINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERG 235
I + V + L++ + M V YN +++GLC+ K + +A+ LF+EML R
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 236 VFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKAN 295
+ P T+ TLI G+CK GN K+ + + M I+P ++T+NTL+ G K G +E A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 296 KLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGY 355
+ +M P+ ++ IL +GY S A ++ V G+K +C+ ++
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 356 CRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDV 415
C+ G KA+E L + +++G+ P+ + YNT+I+G+ R+ ++ A + ME QG+ PD
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 416 ITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDE 475
+ YN ++ FC G M ++E + +M KG++P TY LI G+ + + F E
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 476 MLQRGFVPD 484
M G +P+
Sbjct: 485 MEDNGTMPN 493
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 152/305 (49%), Gaps = 35/305 (11%)
Query: 215 LCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPD 274
L +KM++EA DLF + G++P + T L+ K +N+F + + +P
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 275 IVTYNTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWY 334
Y I K+ ++ K +L+ M +I P+ Y +LI+G C + +A +L+
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 335 EMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREE 394
EM+ + + P+L++ NT+I GYC++G+ K+ + +M ++ ++P I++NTL+ G +
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 395 NMDKAFALVSKMENQGLVPDVITYNVILTGF----------------------------- 425
++ A ++ +M++ G VPD T++++ G+
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 426 ------CRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQR 479
C++G++ +E IL R + KGL P+ Y T+I+G+ + +L A + M ++
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 480 GFVPD 484
G PD
Sbjct: 419 GMKPD 423
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 259 bits (661), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/429 (33%), Positives = 237/429 (55%), Gaps = 10/429 (2%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++N C ++ A L +M + G PD VT +L+N +CR + +A L++ M G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
KP + YN++I+ LCK R + A + E+ + G+ P+ TY L+ C S+A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M ++ + P+++++S L+ F +NG++ A F EM + PD V Y+ +ING
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C + + EA +M D M+ KGC+ DVV+YNT++NG C+AK + + LF EM +RG+ +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLI G + G+++KA F M I PDI TYN L+ G C GE+EKA ++ D
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M R++ + ++Y +I G C G V EA+ L+ + KG+KP +V+ T++ G C G
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+ + +KM EG+ + TL +G ++ + L+ KM + G P ++
Sbjct: 486 LHEVEALYTKMKQEGLMKNDC---TLSDG-----DITLSAELIKKMLSCGYAPSLL--KD 535
Query: 421 ILTGFCRQG 429
I +G C++
Sbjct: 536 IKSGVCKKA 544
Score = 255 bits (651), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 257/477 (53%), Gaps = 8/477 (1%)
Query: 7 KDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVF 66
+D K++ A +M + +P V +N L++A + + L M G++ ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 67 TYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEM 126
T+N +IN C + A +L +ML++G PD T +L+ CR+ +S+A + +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 127 SRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFV 186
G PDIV+++ +I + +++ A +F+E++ G+ P+ V YT ++NG C +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 187 LEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTL 246
+A ++ +M++K +V+TY+ +L+ + + EA +LF EM+ + PD T+++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 247 IHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKI 306
I+G C +++A +FD+M K D+V+YNTLI+GFCK +E KL+ +M R +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 307 SPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADE 366
N ++Y LI G+ G V +A + +M GI P + + N ++ G C +G+ KA
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 367 FLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFC 426
M +D D ++Y T+I G + +++A++L + +GL PD++TY +++G C
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 427 RQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVP 483
+G +H+ E + +M ++GL + T +S ++ + +ML G+ P
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKKMLSCGYAP 530
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 241/444 (54%)
Query: 42 REGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTA 101
R+ L +A L + M P + +N L++ + K + D + +M +G+ D
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 102 TYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREM 161
T+N ++ C +S A I +M + G PD V+ +L+ F R ++ A+ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 162 KSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKML 221
G PD V Y II+ C+ V +A E+ KG +VVTY ++NGLC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 222 TEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTL 281
++A L ++M+++ + P+ T++ L+ K+G + +A LF+ M + SI PDIVTY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 282 IDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGI 341
I+G C +++AN+++ M+S+ + +SY LING+C V + +L+ EM +G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 342 KPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFA 401
V+ NT+I+G+ ++GD KA EF S+M G+ PD +YN L+ G ++KA
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 402 LVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHV 461
+ M+ + + D++TY ++ G C+ G++ ++ + + KGL PD TYTT+++G
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 462 SQNNLKEAFRFHDEMLQRGFVPDD 485
++ L E + +M Q G + +D
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKND 505
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 235/414 (56%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++A+ K K D +ME G+ D T+N +IN +C + A ++ M G
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P T SL+NG C++ R A ++D+M+++G PD YN ++ C+ + +++A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ F E+ R+G+ P++V+++ L+ + + A +M + P+ + Y+ +++ +
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+NG VLEA ++ +EM+ D+VTY++++NGLC + EA+ +F+ M+ +G D
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
++ TLI+G CK + + LF M+Q+ + + VTYNTLI GF + G+++KA + ++
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M ISP+ +Y IL+ G C G + +A ++ +M + + +V+ T+I+G C++G
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPD 414
+A + +G+ PD ++Y T+++G + + + AL +KM+ +GL+ +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 254 bits (650), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 258/478 (53%), Gaps = 6/478 (1%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
M+++ K ++ EM+++ + VTYN LIN + + G +EEA + M G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+++N LI G CK+G D A V DEML G+ P T+TYN + C + +A
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+ M+ APD+VS++TL+ + + G+ A + F ++++ + P V Y +I+G
Sbjct: 364 ELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C +G + A ++++EM + DV+TY T++ G + L+ A ++++EML +G+ PD
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIK-PDIVTYNTLIDGFCKVGEMEKANKLWA 299
Y +TT G + G+ +KA L + M PD+ YN IDG CKVG + KA +
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Query: 300 DMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSG 359
+ + P++++Y +I GY G A L+ EM+ K + P++++ +I G+ ++G
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599
Query: 360 DASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYN 419
+A ++ ++M GV P+ +++N L+ G + N+D+A+ + KME +G+ P+ +Y
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659
Query: 420 VILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEML 477
++++ C + + + M++K + PD T+ L H+ +++ F + +L
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK-HLEKDHESREVEFLERLL 716
Score = 244 bits (624), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 252/465 (54%), Gaps = 5/465 (1%)
Query: 21 MEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGR 80
M + G+ P +T+NT++++ + G LE ++ M + ++ TYN LING K G+
Sbjct: 229 MIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGK 288
Query: 81 CDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFST 140
+ A+ +M + G + ++N L+ C++ +A + EM G+ P +++
Sbjct: 289 MEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNI 348
Query: 141 LIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKG 200
I G++D A RE+ S+ PD V Y +++GY + G +EA + D++
Sbjct: 349 YICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 404
Query: 201 CVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKAL 260
+VTYNT+++GLC + L A L EM + +FPD T+TTL+ G K+GN++ A
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 464
Query: 261 NLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISR-KISPNYISYGILING 319
++D M +K IKPD Y T G ++G+ +KA +L +M++ +P+ Y + I+G
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 320 YCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPD 379
C +G++ +A ++ G+ P V+ T+I+GY +G A +M+ + + P
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Query: 380 SISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILW 439
I+Y LI G + +++AF ++M+ +G+ P+V+T+N +L G C+ G + ++ L
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 440 RMIEKGLNPDRSTYTTLINGHVSQNNLKEAFRFHDEMLQRGFVPD 484
+M E+G+ P++ +YT LI+ + +E + + EML + PD
Sbjct: 645 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/447 (31%), Positives = 229/447 (51%), Gaps = 5/447 (1%)
Query: 39 AYCREGFLEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSP 98
Y ++ E+ M KG P V N ++ L ++A V + M++ G+ P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 99 DTATYNTLLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYF 158
T+NT+L + ++ ++I+ EM RR + V+++ LI FS+NG+++ A +
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 159 REMKSAGLVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRA 218
+M+ +G + +I GYC+ G +A + DEML G TYN + LC
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 219 KMLTEADDLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTY 278
+ +A +L + M PD ++ TL+HG+ K G +A LFD + I P IVTY
Sbjct: 357 GRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 279 NTLIDGFCKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVG 338
NTLIDG C+ G +E A +L +M ++ I P+ I+Y L+ G+ G+++ A ++ EM+
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 339 KGIKPTLVSCNTIIKGYCRSGDASKADEFLSKMV-SEGVDPDSISYNTLINGFVREENMD 397
KGIKP + T G R GD+ KA +MV ++ PD YN I+G + N+
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 398 KAFALVSKMENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLI 457
KA K+ GLVPD +TY ++ G+ G+ + + M+ K L P TY LI
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 458 NGHVSQNNLKEAFRFHDEMLQRGFVPD 484
GH L++AF++ EM +RG P+
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPN 619
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 216/384 (56%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ C+ ++ A L +M + G P VT +L+N +C+ +EA L++SM G G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P V YN++INGLCK + A EV M + G+ D TYNTL+ ++A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
+ +M +R + P+++ F+ LI F + G L A ++EM +VP+ Y +ING+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
C +G + +A M D M+ KGC DVVTYNT++ G C++K + + LF EM +G+ D
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
+T+ TLIHG+C+ G +N A +F+ M + PDIVTYN L+D C G++EKA + D
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
+ ++ + I+Y I+I G C + EA+ L+ + KG+KP ++ T+I G CR G
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 361 ASKADEFLSKMVSEGVDPDSISYN 384
+AD+ +M +G P Y+
Sbjct: 480 QREADKLCRRMKEDGFMPSERIYD 503
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 237/440 (53%)
Query: 46 LEEAFQLMNSMSGKGLKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNT 105
++AF L M P + + ++ + K + D + +M +G+S D ++
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 106 LLVESCRKENMSEAEEIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAG 165
L+ CR +S A + +M + G P IV+ +L+ F + + A+ M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 166 LVPDNVLYTIIINGYCRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEAD 225
VP+ V+Y +ING C+N + AL++ M +KG D VTYNT+++GL + T+A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 226 DLFNEMLERGVFPDFYTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGF 285
L +M++R + P+ FT LI K+GN+ +A NL+ M ++S+ P++ TYN+LI+GF
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 286 CKVGEMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTL 345
C G + A ++ M+S+ P+ ++Y LI G+C V + +L+ EM +G+
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 346 VSCNTIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSK 405
+ NT+I GYC++G + A + ++MV GV PD ++YN L++ ++KA +V
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 406 MENQGLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNN 465
++ + D+ITYN+I+ G CR ++ ++ + + KG+ PD Y T+I+G +
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 466 LKEAFRFHDEMLQRGFVPDD 485
+EA + M + GF+P +
Sbjct: 480 QREADKLCRRMKEDGFMPSE 499
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 227/422 (53%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
++ + K +K D +ME G+ D ++ LI+ +CR L A L+ M G
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
+P + T SL+NG C+ R A ++D M G P+ YNT++ C+ +++ A
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
E+F M ++G+ D V+++TLI S +G+ A R+M + P+ + +T +I+ +
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
+ G +LEA + EM+ + V +V TYN+++NG C L +A +F+ M+ +G FPD
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 241 YTFTTLIHGHCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWAD 300
T+ TLI G CK + + LF MT + + D TYNTLI G+C+ G++ A K++
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 301 MISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGD 360
M+ +SP+ ++Y IL++ C+ G + +A + ++ + +++ N II+G CR+
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 361 ASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNV 420
+A + +GV PD+I+Y T+I+G R+ +A L +M+ G +P Y+
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 421 IL 422
L
Sbjct: 505 TL 506
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 229/454 (50%)
Query: 10 KIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKGLKPGVFTYN 69
K D A CEM Q P V + ++ + + L + M G+ ++++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 70 SLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAEEIFCEMSRR 129
LI+ C+ R A +L +M+++G P T +LL C+ EA + M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 130 GVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGYCRNGFVLEA 189
G P++V ++T+I +N L+ AL F M+ G+ D V Y +I+G +G +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 190 LKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDFYTFTTLIHG 249
++ +M+++ +V+ + +++ + L EA +L+ EM+ R V P+ +T+ +LI+G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 250 HCKDGNMNKALNLFDIMTQKSIKPDIVTYNTLIDGFCKVGEMEKANKLWADMISRKISPN 309
C G + A +FD+M K PD+VTYNTLI GFCK +E KL+ +M + + +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 310 YISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCNTIIKGYCRSGDASKADEFLS 369
+Y LI+GYC G + A +++ MV G+ P +V+ N ++ C +G KA +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 370 KMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQGLVPDVITYNVILTGFCRQG 429
+ +D D I+YN +I G R + + +A+ L + +G+ PD I Y +++G CR+G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 430 RMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQ 463
+++ + RM E G P Y + H +
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 512
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 134/250 (53%)
Query: 1 MVNALCKDHKIDSAKMFLCEMEQKGVYPDTVTYNTLINAYCREGFLEEAFQLMNSMSGKG 60
+++ K+ + A+ EM ++ V P+ TYN+LIN +C G L +A + + M KG
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 61 LKPGVFTYNSLINGLCKKGRCDRAKEVLDEMLQMGLSPDTATYNTLLVESCRKENMSEAE 120
P V TYN+LI G CK R + ++ EM GL D TYNTL+ C+ ++ A+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 121 EIFCEMSRRGVAPDIVSFSTLIGIFSRNGQLDRALMYFREMKSAGLVPDNVLYTIIINGY 180
++F M GV+PDIV+++ L+ NG++++AL+ +++ + + D + Y III G
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 181 CRNGFVLEALKMRDEMLEKGCVMDVVTYNTILNGLCRAKMLTEADDLFNEMLERGVFPDF 240
CR + EA + + KG D + Y T+++GLCR + EAD L M E G P
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 241 YTFTTLIHGH 250
+ + H
Sbjct: 500 RIYDETLRDH 509
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%)
Query: 290 EMEKANKLWADMISRKISPNYISYGILINGYCSMGHVTEAFRLWYEMVGKGIKPTLVSCN 349
+ + A L+ +M+ + P+ + + ++ M L+++M GI L S
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 350 TIIKGYCRSGDASKADEFLSKMVSEGVDPDSISYNTLINGFVREENMDKAFALVSKMENQ 409
+I +CR S A L KM+ G P ++ +L+NGF + +A +LV M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 410 GLVPDVITYNVILTGFCRQGRMHDSELILWRMIEKGLNPDRSTYTTLINGHVSQNNLKEA 469
G VP+V+ YN ++ G C+ ++++ + + M +KG+ D TY TLI+G + +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 470 FRFHDEMLQRGFVPDDAF 487
R +M++R P+ F
Sbjct: 239 ARLLRDMVKRKIDPNVIF 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 179,932,644
Number of Sequences: 539616
Number of extensions: 7475965
Number of successful extensions: 33604
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 17850
Number of HSP's gapped (non-prelim): 3857
length of query: 487
length of database: 191,569,459
effective HSP length: 121
effective length of query: 366
effective length of database: 126,275,923
effective search space: 46216987818
effective search space used: 46216987818
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)