Query 011379
Match_columns 487
No_of_seqs 268 out of 1771
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 00:42:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011379.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011379hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0114 FumC Fumarase [Energy 100.0 5E-129 1E-133 963.8 45.8 449 36-486 2-462 (462)
2 KOG1317 Fumarase [Energy produ 100.0 1E-120 2E-125 879.8 35.6 456 31-486 22-487 (487)
3 COG1027 AspA Aspartate ammonia 100.0 6E-116 1E-120 868.0 44.1 450 35-485 2-463 (471)
4 PRK12425 fumarate hydratase; P 100.0 4E-113 9E-118 904.9 49.2 448 37-486 2-461 (464)
5 PRK14515 aspartate ammonia-lya 100.0 2E-109 4E-114 877.6 50.0 449 35-486 9-469 (479)
6 PLN00134 fumarate hydratase; P 100.0 2E-108 3E-113 869.7 49.6 444 44-487 1-456 (458)
7 TIGR00979 fumC_II fumarate hyd 100.0 2E-107 4E-112 861.6 49.2 446 37-484 1-458 (458)
8 PRK13353 aspartate ammonia-lya 100.0 6E-106 1E-110 853.5 49.2 448 35-485 3-462 (473)
9 PRK00485 fumC fumarate hydrata 100.0 4E-103 8E-108 832.0 49.4 448 36-486 3-463 (464)
10 PRK12273 aspA aspartate ammoni 100.0 5E-103 1E-107 831.0 48.7 451 33-486 1-465 (472)
11 TIGR00839 aspA aspartate ammon 100.0 5E-100 1E-104 805.1 49.3 448 38-486 1-461 (468)
12 cd01357 Aspartase Aspartase. T 100.0 1.1E-99 2E-104 801.9 48.8 438 38-478 1-450 (450)
13 cd01362 Fumarase_classII Class 100.0 1.4E-96 3E-101 778.7 49.8 443 38-482 1-455 (455)
14 cd01596 Aspartase_like asparta 100.0 1.3E-92 2.7E-97 747.0 49.7 438 38-478 1-450 (450)
15 PRK09053 3-carboxy-cis,cis-muc 100.0 8.8E-81 1.9E-85 660.2 40.1 400 52-485 9-435 (452)
16 PRK00855 argininosuccinate lya 100.0 3.3E-76 7.1E-81 626.4 42.7 400 50-485 2-435 (459)
17 cd01597 pCLME prokaryotic 3-ca 100.0 2E-76 4.4E-81 625.4 39.7 397 52-485 3-426 (437)
18 TIGR00838 argH argininosuccina 100.0 1.7E-75 3.7E-80 620.6 41.7 401 54-485 5-431 (455)
19 COG0165 ArgH Argininosuccinate 100.0 1.6E-75 3.4E-80 602.4 39.4 379 52-464 3-388 (459)
20 TIGR00928 purB adenylosuccinat 100.0 8.6E-76 1.9E-80 620.0 38.1 394 52-485 2-427 (435)
21 PRK08540 adenylosuccinate lyas 100.0 4.3E-75 9.3E-80 616.6 38.4 399 49-485 4-432 (449)
22 PLN02646 argininosuccinate lya 100.0 1.3E-74 2.9E-79 613.6 38.6 395 53-484 17-446 (474)
23 PRK07492 adenylosuccinate lyas 100.0 1.9E-74 4.2E-79 607.0 39.2 393 53-485 3-423 (435)
24 PRK08470 adenylosuccinate lyas 100.0 1.3E-73 2.9E-78 602.7 39.4 388 54-485 4-432 (442)
25 PRK07380 adenylosuccinate lyas 100.0 4.2E-73 9E-78 596.2 39.9 385 54-485 4-421 (431)
26 COG0015 PurB Adenylosuccinate 100.0 5.6E-73 1.2E-77 585.3 38.8 391 52-485 2-427 (438)
27 cd01359 Argininosuccinate_lyas 100.0 4.1E-73 8.9E-78 600.1 38.7 378 75-485 4-412 (435)
28 PRK06390 adenylosuccinate lyas 100.0 7.5E-73 1.6E-77 599.1 38.5 402 47-485 2-430 (451)
29 PRK04833 argininosuccinate lya 100.0 3.4E-72 7.4E-77 593.9 41.8 391 54-484 7-432 (455)
30 PRK06705 argininosuccinate lya 100.0 9.7E-72 2.1E-76 595.5 38.9 380 75-486 33-449 (502)
31 cd03302 Adenylsuccinate_lyase_ 100.0 1.5E-71 3.2E-76 586.6 39.6 390 52-485 2-436 (436)
32 cd01595 Adenylsuccinate_lyase_ 100.0 1.6E-71 3.4E-76 578.5 35.4 364 76-466 7-374 (381)
33 cd01360 Adenylsuccinate_lyase_ 100.0 7.9E-71 1.7E-75 573.6 37.2 370 54-466 1-373 (387)
34 TIGR02426 protocat_pcaB 3-carb 100.0 7.1E-70 1.5E-74 556.7 34.9 335 52-424 3-338 (338)
35 PRK12308 bifunctional arginino 100.0 4.1E-68 9E-73 583.3 41.4 365 58-463 11-386 (614)
36 PRK02186 argininosuccinate lya 100.0 6.5E-68 1.4E-72 603.6 41.0 378 52-464 412-796 (887)
37 PRK05975 3-carboxy-cis,cis-muc 100.0 4E-67 8.7E-72 537.9 35.3 334 52-426 12-347 (351)
38 KOG1316 Argininosuccinate lyas 100.0 3.9E-67 8.4E-72 511.0 29.8 373 52-464 6-390 (464)
39 PRK06389 argininosuccinate lya 100.0 1.6E-66 3.6E-71 540.5 35.0 360 61-465 15-379 (434)
40 cd01334 Lyase_I Lyase class I 100.0 1.8E-66 3.8E-71 530.4 34.5 322 80-427 1-325 (325)
41 PRK09285 adenylosuccinate lyas 100.0 3.7E-65 8.1E-70 538.6 35.7 399 48-485 9-447 (456)
42 cd01598 PurB PurB_like adenylo 100.0 7.9E-64 1.7E-68 523.3 35.8 324 76-437 7-358 (425)
43 PF00206 Lyase_1: Lyase; Inte 100.0 9.7E-65 2.1E-69 514.7 22.4 307 45-375 1-312 (312)
44 PLN02848 adenylosuccinate lyas 100.0 2E-62 4.2E-67 517.2 36.8 390 48-485 12-450 (458)
45 KOG2700 Adenylosuccinate lyase 100.0 7.1E-41 1.5E-45 337.7 23.8 401 47-485 6-449 (481)
46 cd01594 Lyase_I_like Lyase cla 100.0 1.8E-35 4E-40 287.1 26.3 168 162-387 32-201 (231)
47 PRK08937 adenylosuccinate lyas 100.0 2.7E-29 5.8E-34 242.3 17.8 167 313-484 22-216 (216)
48 PF10415 FumaraseC_C: Fumarase 98.9 2.3E-09 4.9E-14 80.8 4.2 48 438-485 8-55 (55)
49 PF10397 ADSL_C: Adenylosuccin 97.6 0.00012 2.5E-09 59.8 5.5 48 438-485 17-72 (81)
50 PF14698 ASL_C2: Argininosucci 95.7 0.0055 1.2E-07 48.6 1.6 42 442-484 2-69 (70)
51 KOG2700 Adenylosuccinate lyase 90.6 6.7 0.00014 41.6 14.0 57 40-101 43-100 (481)
52 PF08328 ASL_C: Adenylosuccina 89.1 2 4.3E-05 37.2 7.5 65 418-483 31-115 (115)
53 PF10925 DUF2680: Protein of u 63.0 29 0.00063 26.5 5.9 38 78-115 11-49 (59)
54 COG2346 Truncated hemoglobins 23.9 3.2E+02 0.007 24.4 6.9 61 44-115 59-120 (133)
55 CHL00180 rbcR LysR transcripti 20.5 3.7E+02 0.008 26.6 7.6 56 212-268 47-102 (305)
56 PF02022 Integrase_Zn: Integra 20.4 93 0.002 21.8 2.2 21 92-112 13-34 (40)
57 COG0783 Dps DNA-binding ferrit 20.3 5E+02 0.011 23.8 7.6 73 233-322 45-119 (156)
No 1
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=5.2e-129 Score=963.84 Aligned_cols=449 Identities=68% Similarity=1.042 Sum_probs=442.9
Q ss_pred cccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q 011379 36 SFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEV 114 (487)
Q Consensus 36 ~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v 114 (487)
.+|+|+|+||+++||+|+|||.||+|+++||++|+. +||..+|++++.+|+|+|++|+++| ||++.+++|.++|++|
T Consensus 2 ~~R~E~Dt~G~i~Vpad~~wgAQTqRs~~nF~ig~~--~mp~~~I~Al~~lKkaaA~~N~~LG~L~~~~a~aI~~Aadev 79 (462)
T COG0114 2 TYRIEHDTMGEVEVPADALWGAQTQRSLENFPIGGE--KMPREIIRALGLLKKAAAQVNADLGLLDPEKADAIIAAADEV 79 (462)
T ss_pred CcccccccCccccccHHHHHHHHHHHHHhcCCcccc--cCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999987 7999999999999999999999999 9999999999999999
Q ss_pred HccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHH
Q 011379 115 AEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRL 193 (487)
Q Consensus 115 ~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l 193 (487)
.+|+++++||+++||+||||++|||+||||++++++++|++.|.+. ||||||||+||||||++|||||+++..++...|
T Consensus 80 ~~Gk~d~~FPl~VwQTGSGTqsNMN~NEVIanrA~e~~gg~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~~~L 159 (462)
T COG0114 80 LAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVVNRL 159 (462)
T ss_pred HcCcccCCCCeEEEecCCCccccccHHHHHHHHHHHHhCcccCCCCCCCCCCcCCcccccCcchhhHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999888766 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCC
Q 011379 194 IPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKK 273 (487)
Q Consensus 194 ~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~ 273 (487)
++.|..|+++|.+|+++|++++++||||+|||+|+||||+|++|+.+|.+.++|++.+.+++...++||||||||+|+++
T Consensus 160 iPaL~~L~~~L~~Ka~~~~~iVKiGRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAVGTGlNa~p 239 (462)
T COG0114 160 IPALKHLIKTLAAKAEEFADVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAIGGTAVGTGLNAHP 239 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCcccccccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccCcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCC
Q 011379 274 GFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSI 353 (487)
Q Consensus 274 ~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSi 353 (487)
+|++++.+++++++|+++.+.+|+|.+++++|.+++++++|..+|++|.|||||||+|.||||||+|||.+|+++|||||
T Consensus 240 ~f~ekva~~i~~~TG~~F~~a~NkF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lPenePGSSI 319 (462)
T COG0114 240 EFGEKVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALRTLAVSLMKIANDIRWLGSGPRCGLGEIELPENEPGSSI 319 (462)
T ss_pred cHHHHHHHHHHHHhCCCcccCCcHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHH
Q 011379 354 MPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISK 433 (487)
Q Consensus 354 MP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~ 433 (487)
||+|+||++||.+.++|.||+||++++.++++.|+||+|+++|+++||+|+|+.+|++++..|.++|+.||++|+++|++
T Consensus 320 MPGKVNPtq~EA~tmv~~QV~Gnd~ai~~ags~GnFELNv~~Pvi~~N~LqS~~LLada~~~f~~~ci~gie~n~~~i~~ 399 (462)
T COG0114 320 MPGKVNPTQCEALTMVAAQVIGNDAAIAFAGSQGNFELNVFKPVIAYNFLQSVRLLADAMRSFADHCIVGIEPNEERIKE 399 (462)
T ss_pred CCCCCCchhHHHHHHHHHHHHcchHHHHHhhccCceeeccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCCC
Q 011379 434 LLHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 486 (487)
Q Consensus 434 ~l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~~ 486 (487)
++++ +|||++|++|||.|+++|+++||++.+.|++|++||++|+||++|+++.
T Consensus 400 ~l~~SlmLVTaLnp~IGYdkAa~IAK~A~keg~tlreaa~~~G~lte~efd~~v~Pe~mv~~~ 462 (462)
T COG0114 400 LLERSLMLVTALNPHIGYDKAAKIAKKAHKEGTTLREAALELGLLSEEEFDKLVDPEKMVGPG 462 (462)
T ss_pred HHhhCchHHHhcccccchHHHHHHHHHHHHCCCcHHHHHHHcCCCCHHHHHHhcCHHHhcCCC
Confidence 9998 8999999999999999999999999999999999999999999999974
No 2
>KOG1317 consensus Fumarase [Energy production and conversion]
Probab=100.00 E-value=1e-120 Score=879.84 Aligned_cols=456 Identities=79% Similarity=1.179 Sum_probs=448.5
Q ss_pred ccccccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 011379 31 RSYSTSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQA 110 (487)
Q Consensus 31 ~~~~~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~Gi~~~~a~~I~~a 110 (487)
+++.+++|+|+|+||+++||.|+|||+||+|+..||.|+|.++|||.+.|++|..+|+|+|.+|.++|+++..+++|.++
T Consensus 22 ~~~~~~fR~E~DtfGe~~VP~DkyyGAQT~Rs~~NF~IGg~~ERMP~pii~AfGiLKkaaA~vN~~~GLDpkis~Ai~~A 101 (487)
T KOG1317|consen 22 RSMSSSFRTERDTFGEIEVPADKYYGAQTQRSLQNFKIGGERERMPEPIIQAFGILKKAAAEVNQEYGLDPKISKAISQA 101 (487)
T ss_pred cccccchhhhccccCcccccchhhhhHHHHHHhhccccCCccccCchHHHHHHHHHHHHHHHHhHhhCCChHHHHHHHHH
Confidence 44455799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHH
Q 011379 111 AQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETN 190 (487)
Q Consensus 111 ~~~v~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~ 190 (487)
++++.+|++.++||++.||+||||++|||+||||.||++|++|++.|.+.+|||||||.+|||||.+||+|||++-.++.
T Consensus 102 adeV~~GKL~dhFPLvvwQTGSGTQsNMN~NEVIsNrAieilGg~~GsK~VHPNdHvN~SQSSNDTFPtamHIa~~~ei~ 181 (487)
T KOG1317|consen 102 ADEVASGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEILGGKLGSKKVHPNDHVNKSQSSNDTFPTAMHIAAATEIN 181 (487)
T ss_pred HHHHhcCcccccCceeEEecCCCccccCcHHHHHHHHHHHHhcccccCcccCCccccccccccCCccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCC
Q 011379 191 SRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLN 270 (487)
Q Consensus 191 ~~l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~ 270 (487)
..|.+.|..|.++|..|+.||+|++++||||.|||+|.|+||+|++|++++...++|+..+.+|+....+||||||||+|
T Consensus 182 ~~L~P~l~~L~~aL~aKs~EfkdIiKIGRTHtqDAvPLTLGQEFsgY~qQ~~ngl~Rv~~~lpr~y~LA~GGTAVGTGLN 261 (487)
T KOG1317|consen 182 SRLIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQVTNGLQRVAATLPRLYQLAQGGTAVGTGLN 261 (487)
T ss_pred HhhhHHHHHHHHHHHhhhHHHHHHHHhcccccccccccchhhhhhhHHHHHHHHHHHHHhhhhHHHHHhcCCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCC
Q 011379 271 TKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPG 350 (487)
Q Consensus 271 ~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~G 350 (487)
+.++|++++.+++++++||++...+|.|++++.||.++|++++|++++++|.||++|||++.|||||++||+.+|++++|
T Consensus 262 Tr~GFaeK~a~~va~ltgLpFvtApNkFEALAahDA~VE~~GalNt~A~SlmKianDIRfLGSGPRcGlgEL~LPENEPG 341 (487)
T KOG1317|consen 262 TRKGFAEKIAARVAELTGLPFVTAPNKFEALAAHDAMVEVSGALNTIAVSLMKIANDIRFLGSGPRCGLGELMLPENEPG 341 (487)
T ss_pred ccccHHHHHHHHHHHHhCCCceecccHHHHHHhhhhHHHhcccHHHHHHHHHHHhhhhhhccCCCCCCccccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHH
Q 011379 351 SSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 430 (487)
Q Consensus 351 SSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~er 430 (487)
|||||+|+||++||.+.++|.||+||.++++..+++|+||+|+|+|++..++|.++.+++|+..+|..+|+.||+.|++|
T Consensus 342 SSIMPGKVNPTQcEamTmvcaQVMGN~vAvtvgGsnGhFELNVFKP~i~~nvL~SirLl~D~~~sF~~nCV~GI~aN~er 421 (487)
T KOG1317|consen 342 SSIMPGKVNPTQCEAMTMVCAQVMGNHVAVTVGGSNGHFELNVFKPLIASNVLHSIRLLADASVSFTKNCVVGIEANKER 421 (487)
T ss_pred cccCCCCCCcHHHHHHHHHHHHHhcCceEEEecccCceeEEecchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCCC
Q 011379 431 ISKLLHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 486 (487)
Q Consensus 431 m~~~l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~~ 486 (487)
+.+.++. +|||+.|++||+.|+++|.++++...+.|.+|+|+|++|+.|+.|+||+
T Consensus 422 I~kll~eSLMLVTALNPhIGYD~aAkiAKtAhKng~TLk~eal~lG~lTeeqFdewV~Pe~Mlgpk 487 (487)
T KOG1317|consen 422 IAKLLNESLMLVTALNPHIGYDNAAKIAKTAHKNGTTLKEEALKLGVLTEEQFDEWVVPEKMLGPK 487 (487)
T ss_pred HHHHHHhhhhhhhccCCccCchhHHHHHHHHhhcCCcHHHHHHHhcCCCHHHHHhhhCHHhccCCC
Confidence 9999987 8999999999999999999999999999999999999999999999985
No 3
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-116 Score=868.00 Aligned_cols=450 Identities=45% Similarity=0.721 Sum_probs=440.2
Q ss_pred ccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q 011379 35 TSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQE 113 (487)
Q Consensus 35 ~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~ 113 (487)
+.+|+|+|.+|+.+||.+.|||.||.|+++||+|||......+.+|+++..||+|+|.||.++| ||++.+++|.+||++
T Consensus 2 ~~~R~E~D~lGe~~ip~evYyGI~TlRA~eNF~Is~~~~~~~p~~i~a~~~VKKAaAlaN~elg~l~~~~~~aIv~ACDe 81 (471)
T COG1027 2 TDMRIERDLLGEREIPAEVYYGIHTLRAVENFPISGLKISDVPEFIRAMAMVKKAAALANKELGALPKEIADAIVKACDE 81 (471)
T ss_pred CcchhhhhhcccccCcchhhhhhHHHHHHhcCCCcCCcccccHHHHHHHHHHHHHHHHhhhhhCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999998433348999999999999999999999 999999999999999
Q ss_pred HHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHH
Q 011379 114 VAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (487)
Q Consensus 114 v~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~ 192 (487)
+.+|++.++|++|++|+|+||++|||+||||+|++.|++|.+.|.|. +|||||||++||+||++||++||.+...+ ..
T Consensus 82 il~Gk~~dqFvvD~~QGGAGTS~NMN~NEVIAN~AlE~lG~~KGeY~~~hPndhVNmsQSTND~yPTa~ria~~~~l-~~ 160 (471)
T COG1027 82 ILDGKCHDQFVVDVYQGGAGTSTNMNANEVIANRALELLGHEKGEYQYLHPNDHVNMSQSTNDAYPTAFRIAVYKSL-RK 160 (471)
T ss_pred HHcCccccccceeccccCCCccccccHHHHHHHHHHHHhcCCCCceeeeCCccccchhhcccccchhHHHHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999999997 99999999999999999999999998765 68
Q ss_pred HHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCC
Q 011379 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (487)
Q Consensus 193 l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (487)
|.+.+..|++++..|++||+|++++||||+|||+|+|+|++|.+|+..|.||++||..+.+++..+.+||||+|||+|++
T Consensus 161 L~~al~~L~~af~~Ka~EF~~ilKmGRTqLQDAvPmtlGqEF~Afa~~l~ed~~ri~~~~~~l~evNlGgTAiGTGiNa~ 240 (471)
T COG1027 161 LIDALEDLIEAFERKAKEFADILKMGRTQLQDAVPMTLGQEFGAFAVALKEDIKRIYRAAELLLEVNLGGTAIGTGINAP 240 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcChhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeeccCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCC
Q 011379 273 KGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSS 352 (487)
Q Consensus 273 ~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSS 352 (487)
++|.+.+.+++++.+|++..+.+|.+|++++.|.+++++++|..+|..|+|||||||||+||||+|++||.+|+.|+|||
T Consensus 241 ~~Y~~~vv~~l~evtg~~~~~A~~Lieatq~~~afv~vsg~lk~~Av~LsKI~NDlRLLsSGPr~Gl~EI~LP~~Q~GSS 320 (471)
T COG1027 241 KGYIELVVKKLAEVTGLPLVPAENLIEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAGSS 320 (471)
T ss_pred hhHHHHHHHHHHHHhCCCCccchhHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccCcccccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q 011379 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (487)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~ 432 (487)
|||+|+||+++|.+.++|.+|+|++.++++++..|++|+|+++|++.+++++|+.++.+++..|+++|++||++|+++|+
T Consensus 321 IMPgKVNPVipEvvnQvcf~ViGnD~tit~AaeaGQLqLNvmePvI~~~l~~Si~iL~na~~~l~ekcI~gItaN~e~C~ 400 (471)
T COG1027 321 IMPGKVNPVIPEVVNQVCFKVIGNDTTITMAAEAGQLQLNVMEPVIAYALFESISILTNACRNLREKCIDGITANEERCE 400 (471)
T ss_pred CCCCCcCchhHHHHHHHHHHHhcchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCC
Q 011379 433 KLLHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 433 ~~l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~ 485 (487)
++++. +|||+.+.+++|+|.++|++.+|++++.|.||++||+++|+|+++..|
T Consensus 401 ~~v~nSigivTaLnp~iGy~~~~~iaK~a~~tgksv~evvLe~g~Lteeel~~Il~~~~m~~p 463 (471)
T COG1027 401 EYVENSIGIVTALNPYIGYENAAIIAKEALETGKSVREVVLERGLLTEEELDDILSPENMTKP 463 (471)
T ss_pred HHHHhhhHHHHhhcccccchHHHHHHHHHHHcCCcHHHHHHHhCCCCHHHHHHHhChhhcCCc
Confidence 99988 899999999999999999999999999999999999999999999887
No 4
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=4.2e-113 Score=904.91 Aligned_cols=448 Identities=57% Similarity=0.897 Sum_probs=434.0
Q ss_pred ccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 011379 37 FREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 115 (487)
Q Consensus 37 ~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~ 115 (487)
+|+|+|++|+++||.++|||.||+|+++||+|||. ++|+.+|++++.||+|+|.+|.+.| ||++++++|.++|++|.
T Consensus 2 ~r~e~d~~g~~~~p~~~~~g~~t~ra~~nf~~~~~--~~~~~~i~a~~~ik~Aha~~l~~~G~l~~~~~~~I~~al~ei~ 79 (464)
T PRK12425 2 SRTETDSLGPIEVPEDAYWGAQTQRSLINFAIGKE--RMPLAVLHALALIKKAAARVNDRNGDLPADIARLIEQAADEVL 79 (464)
T ss_pred CCcCcccCCCCCCcccccchHHHHHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999987 8999999999999999999999999 99999999999999999
Q ss_pred ccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 011379 116 EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLI 194 (487)
Q Consensus 116 ~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~ 194 (487)
+++..++||+++||++++||+|||+||||++++.|++|++.|++. ||||||||+||||||+++|+++|++++.+...|.
T Consensus 80 ~~~~~~~f~~~~~~~g~~ed~~mnvnevi~~~~~e~~G~~~g~~~~vhpn~~vh~g~S~ND~~~Ta~~L~~r~~l~~~l~ 159 (464)
T PRK12425 80 DGQHDDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEQLL 159 (464)
T ss_pred cCcccCCCCccCCCCCCcchHHHHHHHHHHHHHHHHhCcccccccccCchhcccCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 998889999999999999999999999999999999997778544 9999999999999999999999998776435899
Q ss_pred HHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCC
Q 011379 195 PNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG 274 (487)
Q Consensus 195 ~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~ 274 (487)
+.|..|+++|.+||++|+|++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|+||||+||+++++++
T Consensus 160 ~~L~~l~~~L~~~A~~~~~tim~GrTHlQ~A~PiT~G~~~~a~~~~l~rd~~RL~~~~~r~~~~plGggAvGT~~~~~~~ 239 (464)
T PRK12425 160 PAIAELSGGLAEQSARHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAALPAVCELAQGGTAVGTGLNAPHG 239 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCeeecccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCCC
Q 011379 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIM 354 (487)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSiM 354 (487)
|++.+.+.+++.|||+.++.+|++|++++||+++|++++|++++++|+|||+||++|+|+||+||||+.+|+.++|||||
T Consensus 240 ~~~~~~~~La~~LG~~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llsS~p~~g~~ei~lp~~~~GSSiM 319 (464)
T PRK12425 240 FAEAIAAELAALSGLPFVTAPNKFAALAGHEPLVSLSGALKTLAVALMKIANDLRLLGSGPRAGLAEVRLPANEPGSSIM 319 (464)
T ss_pred HHHHHHHHHHHHhCCCCcccccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCceEEECCCCCCCCCCC
Confidence 99999999999999999779999999999999999999999999999999999999999999999999999889999999
Q ss_pred CCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHH
Q 011379 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (487)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~ 434 (487)
||||||+.+|.++++|++++|++.++..+..++++++|.++|.+.++++++++++.+++..++.+|+++|+||++||++|
T Consensus 320 PqK~NP~~~E~i~~~a~~v~G~~~~v~~~~~~~~~q~n~~~~~~~~~~l~s~~~l~~~~~~~~~~~i~~l~vn~erm~~~ 399 (464)
T PRK12425 320 PGKVNPTQCEALSMLACQVMGNDATIGFAASQGHLQLNVFKPVIIHNLLQSIRLLADGCRNFQQHCVAGLEPDAEQMAAH 399 (464)
T ss_pred CCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCCC
Q 011379 435 LHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 486 (487)
Q Consensus 435 l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~~ 486 (487)
++. .+||+.|+++++++.++|++|+|++.+.+.+++++|++++||++|+++.
T Consensus 400 l~~~~~~at~L~~~ig~~~A~~ia~~a~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~ 461 (464)
T PRK12425 400 LERGLMLVTALNPHIGYDKAAEIAKKAYAEGTTLREAALALGYLTDEQFDAWVRPENMLEAG 461 (464)
T ss_pred HHcccHHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHhcCCC
Confidence 977 7899999999999999999999999999999999999999999999973
No 5
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=1.9e-109 Score=877.56 Aligned_cols=449 Identities=41% Similarity=0.691 Sum_probs=433.9
Q ss_pred ccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q 011379 35 TSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQE 113 (487)
Q Consensus 35 ~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~ 113 (487)
.++|+|+|++|+++||.++|||.||+|+++||++++. ++|+.+|++++.+++|+|.+|.+.| |+++++++|.++|++
T Consensus 9 ~~~r~e~d~~g~~~~p~~~~~g~~t~ra~~~f~~~~~--~~~~~~i~~~~~v~~A~a~~l~~~G~l~~~~~~~I~~al~e 86 (479)
T PRK14515 9 NGVRIEKDFLGEKEVPNYAYYGVQTMRAVENFPITGY--KIHEGLIKAFAIVKKAAALANTDVGRLELNKGGAIAEAAQE 86 (479)
T ss_pred CCCccccccCCCCCCcccccchHHHHHHHHhccCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999998876 7899999999999999999999999 999999999999999
Q ss_pred HHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHH
Q 011379 114 VAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (487)
Q Consensus 114 v~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~ 192 (487)
|.++...++||++++|+|+||+.|||+|||||+++++++|++.|+|. ||||||||+||||||+++|+++|++++. +..
T Consensus 87 i~~~~~~~~f~~~~~~~g~~t~~nmnvnevie~~~~~~~G~~~g~~~~~hpnd~vn~grS~ND~v~Ta~~L~~~~~-l~~ 165 (479)
T PRK14515 87 ILDGKWHDHFIVDPIQGGAGTSMNMNANEVIANRALELLGMEKGDYHYISPNSHVNMAQSTNDAFPTAIHIATLNA-LEG 165 (479)
T ss_pred HHcCcccCCCCCCcccCCCcccccchHHHHHHHHHHHHhCcccCCccccCccccCCCCCCchhHHHHHHHHHHHHH-HHH
Confidence 99998889999999999999999999999999999999997778876 8999999999999999999999998876 469
Q ss_pred HHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCC
Q 011379 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (487)
Q Consensus 193 l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (487)
|.+.|..|+++|.++|++|+|++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+||+++++
T Consensus 166 l~~~L~~L~~~L~~~A~~~~~~vm~GrTHlQ~A~PiT~G~~~~~~a~~l~r~~~RL~~~~~~l~~~pLG~gAvGT~~~~~ 245 (479)
T PRK14515 166 LLQTMGYMHDVFELKAEQFDHVIKMGRTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSRQHLYEVNMGATAVGTGLNAD 245 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccchhccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred CCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCC
Q 011379 273 KGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSS 352 (487)
Q Consensus 273 ~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSS 352 (487)
++|..++...+++.+|++.+..+|.+|++++||++++++++|++++.+|+|||+||++|+|+||+||+|+.+|++++|||
T Consensus 246 ~~~~~~~l~~la~~~gl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~kiA~Dl~llsS~p~~g~~Ei~lp~~~~GSS 325 (479)
T PRK14515 246 PEYIEAVVKHLAAISELPLVGAEDLVDATQNTDAYTEVSAALKVCMMNMSKIANDLRLMASGPRVGLAEIMLPARQPGSS 325 (479)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCcchHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCeeEEeCCCCCCCcC
Confidence 99999999999999999987788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q 011379 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (487)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~ 432 (487)
||||||||+.+|.++++|++++|++.++.+...++++|+|.++|++.++++.+++++.+++..++.+|++||+||++||+
T Consensus 326 iMP~KrNP~~~E~i~~~a~~v~G~~~~~~~~~~~~~le~n~~~p~i~~~l~~si~~l~~al~~~~~~~l~gl~vn~erm~ 405 (479)
T PRK14515 326 IMPGKVNPVMPEVINQIAFQVIGNDHTICLASEAGQLELNVMEPVLVFNLLQSISIMNNGFRAFTDNCLKGIEANEDRLK 405 (479)
T ss_pred CCCcccCchHHHHHHHHHHHHHhHHHHHHHHHhcccHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999999888899999999999999999999999999999998889999999999999
Q ss_pred HHHHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCCC
Q 011379 433 KLLHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 486 (487)
Q Consensus 433 ~~l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~~ 486 (487)
+|++. ++||+.+++++++|.++|++|+|++.+.+.++++|+++++||+++++|+
T Consensus 406 ~~l~~s~~l~t~La~~iG~~~v~~~a~~A~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~ 469 (479)
T PRK14515 406 EYVEKSVGIITAVNPHIGYEAAARVAKEAIATGQSVRELCVKNGVLSQEDLELILDPFEMTHPG 469 (479)
T ss_pred HHHHhCccHHHHhcchhcHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHhCCHHHcCCCC
Confidence 99988 7999999999999999999999999999999999999999999999873
No 6
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=1.5e-108 Score=869.75 Aligned_cols=444 Identities=88% Similarity=1.284 Sum_probs=429.5
Q ss_pred CCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCC
Q 011379 44 FGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDH 122 (487)
Q Consensus 44 ~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~ 122 (487)
+|+++||.+.|||.||+|+++||++||.+.++++++|++|+.||+|++++|.+.| ||++++++|.++|+++.+++..++
T Consensus 1 ~g~~~~p~~~~~g~~t~ra~~nf~~~~~~~~~~~~~i~a~~~v~~A~a~~l~~~G~l~~~~a~~I~~al~ei~~~~~~~~ 80 (458)
T PLN00134 1 MGPIQVPADKLWGAQTQRSLQNFEIGGERERMPEPIVRAFGIVKKAAAKVNMEYGLLDPDIGKAIMQAADEVAEGKLDDH 80 (458)
T ss_pred CCCccCCcccchhHHHHHHHHhcCCCCCccCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCC
Confidence 6999999999999999999999999995558899999999999999999999999 999999999999999999888899
Q ss_pred CcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 123 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLH 201 (487)
Q Consensus 123 f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~ 201 (487)
|+++++|+|+||+.|||+||||+++++|++|++.|+|. +|||||||+|+||||+++|+++|+++++++..+.+.|..|+
T Consensus 81 f~~~~~~~g~g~~~~~~v~evie~~l~e~~g~~~g~~~~lHp~d~vh~G~S~nDiv~Ta~~L~~~~~~~~~l~~~l~~l~ 160 (458)
T PLN00134 81 FPLVVWQTGSGTQTNMNANEVIANRAAEILGGPVGEKSPVHPNDHVNRSQSSNDTFPTAMHIAAATEIHSRLIPALKELH 160 (458)
T ss_pred ccccccccCCcccccCcHHHHHHHHHHHHhCcccCCccccCcccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997788775 99999999999999999999999988776678999999999
Q ss_pred HHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHH
Q 011379 202 NSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIAS 281 (487)
Q Consensus 202 ~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~ 281 (487)
++|.++|++|+||+||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+||++++++.|+.++++
T Consensus 161 ~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~~~~~v~~ 240 (458)
T PLN00134 161 ESLRAKSFEFKDIVKIGRTHLQDAVPLTLGQEFSGYATQVKYGLNRVQCTLPRLYELAQGGTAVGTGLNTKKGFDEKIAA 240 (458)
T ss_pred HHHHHHHHHhcCCccccccccCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCccCChhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCCCCCCCChh
Q 011379 282 AVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 361 (487)
Q Consensus 282 ~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSiMP~K~NP~ 361 (487)
+++++|||+.+..+|++|++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|+.++|||||||||||+
T Consensus 241 ~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~p~~e~gev~lp~~~~GSSiMP~KrNPv 320 (458)
T PLN00134 241 AVAEETGLPFVTAPNKFEALAAHDAFVELSGALNTVAVSLMKIANDIRLLGSGPRCGLGELNLPENEPGSSIMPGKVNPT 320 (458)
T ss_pred HHHHHhCCCCCCCccHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcceEECCCCCCCCCCCCCCcCCH
Confidence 99999999997789999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred hhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh----
Q 011379 362 QCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE---- 437 (487)
Q Consensus 362 ~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~---- 437 (487)
.+|.++++|+++.|++.++.....+++++.|+++|++.|.++++++.+.+++..++..|+++|+||++||++|++.
T Consensus 321 ~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~l~~l~vn~erm~~~l~~~~~l 400 (458)
T PLN00134 321 QCEALTMVCAQVMGNHVAITVGGSAGHFELNVFKPLIAYNLLHSIRLLGDASASFRKNCVRGIEANRERISKLLHESLML 400 (458)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccch
Confidence 9999999999999999999877889999999899999999999999999999999889999999999999999987
Q ss_pred ------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCCCC
Q 011379 438 ------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPSD 487 (487)
Q Consensus 438 ------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~~~ 487 (487)
++||+.|+++++++.++|++|+|++.+.+.++++|+++++||++|+||++
T Consensus 401 ~~~La~~ig~~~A~~~~~~a~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~~ 456 (458)
T PLN00134 401 VTALNPKIGYDKAAAVAKKAHKEGTTLKEAALKLGVLTAEEFDELVVPEKMTGPSD 456 (458)
T ss_pred HHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHhcCCCC
Confidence 79999999999999999999999999999999999999999999999864
No 7
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=1.8e-107 Score=861.58 Aligned_cols=446 Identities=69% Similarity=1.065 Sum_probs=429.0
Q ss_pred ccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 011379 37 FREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 115 (487)
Q Consensus 37 ~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~ 115 (487)
||+|+|++|+++||.++|||.||+|+++||+++|+ ++++++|++|++||+|+|.+|+++| ||++++++|.++|+++.
T Consensus 1 ~r~e~d~~g~~~~p~~~~~g~~t~r~~~~f~~~~~--~~~~~~i~a~~~ve~A~a~a~~~~Giip~~~a~~I~~a~~~i~ 78 (458)
T TIGR00979 1 FRIEKDSMGEIQVPADKYWGAQTQRSLENFKIGTE--KMPLELIHAFAILKKAAAIVNEDLGKLDAKKADAIVQAADEIL 78 (458)
T ss_pred CCCccccCCCCCCcccchhhHHHHHHHhcCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999988 7899999999999999999999999 99999999999999998
Q ss_pred ccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 011379 116 EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLI 194 (487)
Q Consensus 116 ~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~ 194 (487)
++.++++|+.++++++.++++|||+|+||++++.+++|++.|++. +|||||||||+||||++||+++|++++.++..|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~m~~~~via~~l~e~~g~~~g~~~~vH~~d~vn~G~S~nDiv~Ta~~L~lr~~l~~~l~ 158 (458)
T TIGR00979 79 AGKLDDHFPLVVWQTGSGTQSNMNVNEVIANRAIELLGGKLGSKQPVHPNDHVNKSQSSNDTFPTAMHIAAVLAIKNQLI 158 (458)
T ss_pred hccccCCCceecccccccccccccHHHHHHHHHHHHcCcccCCCceeCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 877778999999999999999999999999999999987675332 9999999999999999999999998766436999
Q ss_pred HHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCC
Q 011379 195 PNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG 274 (487)
Q Consensus 195 ~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~ 274 (487)
+.|..|+++|.++|++|+||+|+||||+||||||||||||++|+++|.|+++||.+++++++.+||||||+||++++++.
T Consensus 159 ~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~ 238 (458)
T TIGR00979 159 PALENLKKTLDAKSKEFAHIVKIGRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLYELAIGGTAVGTGLNTHPG 238 (458)
T ss_pred HHHHHHHHHHHHHHHHccCCeeecccccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhcCCccCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCCC
Q 011379 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIM 354 (487)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSiM 354 (487)
|+.++++++++.|||+.++++|++|++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|++++|||||
T Consensus 239 ~~~~v~~~~a~~LGl~~~~~~n~~~~~~~rD~~~e~~~~La~la~~L~kia~Dl~llss~~~~e~gev~~p~~~~GSSiM 318 (458)
T TIGR00979 239 FDEKVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRCGLGELFIPENEPGSSIM 318 (458)
T ss_pred HHHHHHHHHHHHhCCCCeecCcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeEECCCCCCCCCCC
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHH
Q 011379 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (487)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~ 434 (487)
||||||+.+|.++++|+++.|+..++..+...++++++.++|.+.|+++++++.+.+++..++..|+++|+||++||++|
T Consensus 319 P~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~erm~~n 398 (458)
T TIGR00979 319 PGKVNPTQCEALTMVCVQVMGNDATIGFAGSQGNFELNVFKPVIIYNFLQSVRLLSDAMESFRDHCVVGIEPNKERIQQL 398 (458)
T ss_pred CCCcCCHHHHHHHHHHHHHHhhHHHHHHHHHhccchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999999988888899999999999999999999999999999888999999999999999
Q ss_pred HHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccC
Q 011379 435 LHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 484 (487)
Q Consensus 435 l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g 484 (487)
++. ++||+.|+++++++.++|.+|+|++.+.+.++++|+++++||++|+|
T Consensus 399 l~~~~~~~t~La~~lg~~~A~~~~~~a~~~~~~~~e~~~~~~~l~~~el~~~ldp~~~~~ 458 (458)
T TIGR00979 399 LNNSLMLVTALNPHIGYDNAAKIAKKAHKEGITLKEAALELGLLSEEEFDEWVVPEQMVG 458 (458)
T ss_pred HHcCccHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHcCHHHhcC
Confidence 988 69999999999999999999999999989999999999999999986
No 8
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=6.5e-106 Score=853.51 Aligned_cols=448 Identities=46% Similarity=0.722 Sum_probs=430.4
Q ss_pred ccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q 011379 35 TSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQE 113 (487)
Q Consensus 35 ~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~ 113 (487)
..+|+|+|++|+++||.+.|||.||+|+++||+++|. ++|+++|++|++||+|+|.+|.+.| ||++++++|.++|++
T Consensus 3 ~~~r~~~d~~g~~~~~~~~~~g~~t~r~~~~f~~~~~--~~~~~~i~a~~~ve~A~a~~l~~~Glip~~~a~~I~~al~~ 80 (473)
T PRK13353 3 KNMRIEHDLLGEKEVPAEAYYGIQTLRAVENFPITGY--KIHPELIRAFAQVKKAAALANADLGLLPRRIAEAIVQACDE 80 (473)
T ss_pred CCcccccccCCCCCCcccccchHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999986 8999999999999999999999999 999999999999999
Q ss_pred HHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHH
Q 011379 114 VAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (487)
Q Consensus 114 v~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~ 192 (487)
+.++...++||++++++++++++|||+|++|++++.+++|++.|+|. ||||||||+||||||+++|+++|++++. +..
T Consensus 81 i~~~~~~d~f~~~~~~~~~~~~~~~n~~~vi~~~l~e~~g~~~g~~~~~hp~d~vH~GrSrnD~v~Ta~~L~~r~~-l~~ 159 (473)
T PRK13353 81 ILAGKLHDQFIVDPIQGGAGTSTNMNANEVIANRALELLGGEKGDYHYVSPNDHVNMAQSTNDVFPTAIRIAALNL-LEG 159 (473)
T ss_pred HHhccccCCCCcchhhccccchhcchhhHHHHHHHHHHhCccccCCccCCcccCccCCCChhhHHHHHHHHHHHHH-HHH
Confidence 98877778999999999999999999999999999999997778875 9999999999999999999999998766 469
Q ss_pred HHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCC
Q 011379 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (487)
Q Consensus 193 l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (487)
|.+.|..|+++|.+||++|+|++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+||+++++
T Consensus 160 l~~~L~~l~~~L~~~A~~~~~~im~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGT~~~~~ 239 (473)
T PRK13353 160 LLAAMGALQDVFEEKAAEFDHVIKMGRTQLQDAVPITLGQEFSAYARALKRDRKRIQQAREHLYEVNLGGTAVGTGLNAD 239 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCC
Q 011379 273 KGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSS 352 (487)
Q Consensus 273 ~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSS 352 (487)
++|+.+++++++++|||+.++.+|.+|++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|+.++|||
T Consensus 240 ~~~~~~~~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~la~la~~l~riA~Dl~llss~pr~e~gev~lp~~~~GSS 319 (473)
T PRK13353 240 PEYIERVVKHLAAITGLPLVGAEDLVDATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSSGPRTGLGEINLPAVQPGSS 319 (473)
T ss_pred hhHHHHHHHHHHHHhCCCCccccchHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCceEEECCCCCCCCC
Confidence 99999999999999999977788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q 011379 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (487)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~ 432 (487)
||||||||+.+|.++++|++++|+.+++..+..+++++.|..+|.+..+++.+++.+.+++..++..|+++|+||++||+
T Consensus 320 iMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~vn~erm~ 399 (473)
T PRK13353 320 IMPGKVNPVMPEVVNQIAFQVIGNDVTITLAAEAGQLELNVMEPVIAFNLLESISILTNACRAFTDNCVKGIEANEERCK 399 (473)
T ss_pred CCCCCcCChHHHHHHHHHHHHHhHHHHHHHHHHcCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999998877888899999999888999999999999999998889999999999999
Q ss_pred HHHHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCC
Q 011379 433 KLLHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 433 ~~l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~ 485 (487)
+|++. .+||+.+.++++++.++|++|+|++.+.+.++++++++++||++|++|
T Consensus 400 ~~l~~~~~l~t~La~~Lgh~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~el~~~ldp~~~v~~ 462 (473)
T PRK13353 400 EYVEKSVGIATALNPHIGYEAAARIAKEAIATGRSVRELALENGLLSEEELDLILDPFRMTHP 462 (473)
T ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCCHHHHHHHcCHHHhcCC
Confidence 99988 689999999999999999999999999999999999999999999986
No 9
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=3.7e-103 Score=831.99 Aligned_cols=448 Identities=68% Similarity=1.033 Sum_probs=426.9
Q ss_pred cccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q 011379 36 SFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEV 114 (487)
Q Consensus 36 ~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v 114 (487)
.+|+|+|++|+++||.+++||+++.|+++||++|+. ++|++++++|++|++|+|.++.++| ||++++++|.++|+++
T Consensus 3 ~~r~e~d~~g~~~~~~~~l~g~~~~~~~~~f~~s~~--~~~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~~i 80 (464)
T PRK00485 3 ETRIEKDSMGEVEVPADALWGAQTQRSLENFPIGGE--RMPRELIRALALLKKAAARVNAELGLLDAEKADAIVAAADEV 80 (464)
T ss_pred CcccccccCCCcCCccccccchhhHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999876 6899999999999999999999999 9999999999999999
Q ss_pred HccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccC--CCcccccccccCCCCChhhHHHHHHHHHHHHHHHHH
Q 011379 115 AEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKR--GEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (487)
Q Consensus 115 ~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~--g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~ 192 (487)
.++..+++|+.++.+++.++++|||+|++|++++.+..|++. |++ +|+++|||+|+||||+++|+++|++++.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~-~h~~~~vh~G~SrnD~v~Ta~~L~lr~~l~~~ 159 (464)
T PRK00485 81 IAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKP-VHPNDHVNMSQSSNDTFPTAMHIAAVLAIVER 159 (464)
T ss_pred HhCccccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCc-cCccccCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 776667899999999999999999999999998877767544 445 99999999999999999999999987654269
Q ss_pred HHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCC
Q 011379 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (487)
Q Consensus 193 l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (487)
+.+.|..|+++|.++|++|+|++||||||+||||||||||||++|+++|.|+++||.+++++++.+||||||+||+++++
T Consensus 160 l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~PiTfG~~~~~~~~~l~R~~~RL~~~~~r~~~~pLGg~AvGT~~~~~ 239 (464)
T PRK00485 160 LLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAALPHLYELALGGTAVGTGLNAH 239 (464)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeeeeecCcCceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred CCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCC
Q 011379 273 KGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSS 352 (487)
Q Consensus 273 ~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSS 352 (487)
++|+.++++++|++|||+.++.+|++|++++||+++|++++|++++++|+|||+||++|+|+||+|||||.+|++++|||
T Consensus 240 ~~~~~~v~~~~A~~LGl~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~ria~Dl~l~ss~~~~e~gev~lp~~~~GSS 319 (464)
T PRK00485 240 PGFAERVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLASGPRCGLGEISLPENEPGSS 319 (464)
T ss_pred hhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEcCCCCCCCC
Confidence 99999999999999999976899999999999999999999999999999999999999999999999999999899999
Q ss_pred CCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q 011379 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (487)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~ 432 (487)
||||||||+.+|.++++|+++.|+..++.....+++||+|...|.+.|+++++++.+.+++..++..|+++|+||++||+
T Consensus 320 iMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~v~~erm~ 399 (464)
T PRK00485 320 IMPGKVNPTQCEALTMVCAQVMGNDAAVTFAGSQGNFELNVFKPVIAYNFLQSIRLLADAMRSFADHCVVGIEPNRERIK 399 (464)
T ss_pred CCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHhccCcccccccChHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999998788999999999999899999999999999999998899999999999999
Q ss_pred HHHHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCCC
Q 011379 433 KLLHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 486 (487)
Q Consensus 433 ~~l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~~ 486 (487)
+|++. ++||+.|+++++++.++|.+|+|++.+.+.++++++++++||++|+||.
T Consensus 400 ~~l~~~~~~~t~La~~lg~~~A~~~~~~a~~~g~~l~~~~~~~~~l~~~~l~~~ldP~~~~~~~ 463 (464)
T PRK00485 400 ELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKEAALELGYLTEEEFDRWVDPEKMTGPG 463 (464)
T ss_pred HHHHhCCeeHHHhccccCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCHHHhcCCC
Confidence 99977 6899999999999999999999999999999999999999999999984
No 10
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=5.3e-103 Score=831.01 Aligned_cols=451 Identities=45% Similarity=0.721 Sum_probs=425.3
Q ss_pred ccccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCC--HHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH
Q 011379 33 YSTSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMP--EPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQ 109 (487)
Q Consensus 33 ~~~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~--~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~ 109 (487)
||+.+|+|+|+||+++||.+.|||.||+|+++||+++|. ++| ++++++|++|++|+|+++.+.| ||++++++|.+
T Consensus 1 ~~~~~r~~~~~~~~~~~~~~~~~~~~t~~~~~~f~~~~~--~~~~~~~~~~~~l~ve~A~a~al~~~Gii~~~~a~~I~~ 78 (472)
T PRK12273 1 MMMNTRIEKDLLGEREVPADAYYGIHTLRAVENFPISGV--KISDYPELIRALAMVKKAAALANKELGLLDEEKADAIVA 78 (472)
T ss_pred CCCCcccccccCCCcCCcccccchHHHHHHHHcCCCCCC--CCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 355699999999999999999999999999999999987 556 9999999999999999999999 99999999999
Q ss_pred HHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCc-ccccccccCCCCChhhHHHHHHHHHHHHH
Q 011379 110 AAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSSNDTFPTVMHIAAAME 188 (487)
Q Consensus 110 a~~~v~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~-~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~ 188 (487)
+|+++.++...+.|+++.++++++++.|||+|++|++++.+++|++.|+| .+|||||||+|+||||+++|+++|++++.
T Consensus 79 al~~i~~~~~~~~~~~~~~~~~~~e~~~~~v~~~i~~~~~e~~g~~~~~~~~vHp~d~v~~GrSrnD~v~Ta~~L~lr~~ 158 (472)
T PRK12273 79 ACDEILAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDAYPTAIRIALLLS 158 (472)
T ss_pred HHHHHHhccccCCcccchhhccccchhhhHHHHHHHHHHHHHhCcccCCcceeCCCCCCCCCCCchHHHHHHHHHHHHHH
Confidence 99999877667789999999999999999999999998779998666655 39999999999999999999999998766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCC
Q 011379 189 TNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG 268 (487)
Q Consensus 189 ~~~~l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~ 268 (487)
+..+.+.|..|+++|.++|++|+||+||||||+|||||+|||||+++|+++|.|+++||.+++++++.+||||||+||+
T Consensus 159 -l~~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~AqP~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~plGg~AvGT~ 237 (472)
T PRK12273 159 -LRKLLDALEQLQEAFEAKAKEFADILKMGRTQLQDAVPMTLGQEFGAYAVALAEDRKRLYRAAELLREVNLGATAIGTG 237 (472)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHccCCEEeecccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccceeCC
Confidence 4699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCC
Q 011379 269 LNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENE 348 (487)
Q Consensus 269 ~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~ 348 (487)
++++++|+..+++++|++|||+.++++|++|++++||++++++++++.++++|+|||+||++|+|+||+|||||.+|+++
T Consensus 238 ~~i~~~~~~~v~~~~A~~LGf~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~rlA~Di~llss~e~~e~gev~lp~~~ 317 (472)
T PRK12273 238 LNAPPGYIELVVEKLAEITGLPLVPAEDLIEATQDTGAFVEVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQ 317 (472)
T ss_pred CCCChhHHHHHHHHHHHHcCCCcccCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCceEEECCCCC
Confidence 99999998999999999999997677899999999999999999999999999999999999999999999999999889
Q ss_pred CCCCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCH
Q 011379 349 PGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANR 428 (487)
Q Consensus 349 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~ 428 (487)
+|||||||||||+.+|.++++|+++.|+..++.....+.+++.|...|.+...+++++..+..++..+..+|+++|+||+
T Consensus 318 ~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~ 397 (472)
T PRK12273 318 AGSSIMPGKVNPVIPEVVNQVCFQVIGNDTTVTMAAEAGQLELNVMEPVIAYNLFESISILTNACRTLREKCIDGITANE 397 (472)
T ss_pred CcCCCCCcccCcHHHHHHHHHHHHHhhhHHHHHHHHHcCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHccCEECH
Confidence 99999999999999999999999999999999876677788888888888888999999999999998546999999999
Q ss_pred HHHHHHHHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCCC
Q 011379 429 ERISKLLHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 486 (487)
Q Consensus 429 erm~~~l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~~ 486 (487)
+||++|++. .+||+.|+++++++.++|++|+|+..+.+.+++++|++++||++|++|+
T Consensus 398 erm~~~l~~~~~~~t~LA~~L~~~~a~~lv~~a~~~g~~l~~~~~~~~~l~~~el~~~ldp~~~v~~~ 465 (472)
T PRK12273 398 ERCREYVENSIGIVTALNPYIGYENAAEIAKEALETGKSVRELVLERGLLTEEELDDILSPENMTHPG 465 (472)
T ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCCHHHHHHHcCHHHhCCCC
Confidence 999999987 6899999999999999999999999988999999999999999999874
No 11
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=5.4e-100 Score=805.05 Aligned_cols=448 Identities=40% Similarity=0.648 Sum_probs=422.4
Q ss_pred cccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q 011379 38 REEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE 116 (487)
Q Consensus 38 r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~ 116 (487)
|||.|++|+++||.+.|||.+|.|+++||+++|.+..++++++++|++||.|+|++|+++| ||++++++|.++|+++.+
T Consensus 1 r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~i~~~l~ve~A~a~al~e~GiIp~~~a~~I~~al~~~~d 80 (468)
T TIGR00839 1 RIEEDLLGEREVPADAYYGIHTLRASENFYISNNKISDIPEFVRGMVMVKKAAALANKELGTIPESIANAIVAACDEILN 80 (468)
T ss_pred CCCcccCCCCCCcccccchHHHHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999997544559999999999999999999999 999999999999988765
Q ss_pred -cccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 011379 117 -GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLI 194 (487)
Q Consensus 117 -~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~ 194 (487)
++..+.|++++.++++||++|||+|+||++++++.+|++.|+|- .|||||||+|+||||+++|+++|++++. +..+.
T Consensus 81 ~~~~~~~~~l~~~~~~~g~~~~~~v~~vie~~l~e~~g~~~g~~~H~~p~~~v~~G~S~nD~v~Ta~~L~lr~~-l~~l~ 159 (468)
T TIGR00839 81 NGKCHDQFPVDVYQGGAGTSVNMNTNEVIANLALELMGHQKGEYQYLNPNDHVNKSQSTNDAYPTGFRIAVYSS-LIKLV 159 (468)
T ss_pred cccccccccccHHHccCccccccchHHHHHHHHHHHhCccccCeeecCCCCCCCCCCChhhHHHHHHHHHHHHH-HHHHH
Confidence 55666899999999999999999999999999999987788883 4699999999999999999999998765 57999
Q ss_pred HHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCC
Q 011379 195 PNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG 274 (487)
Q Consensus 195 ~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~ 274 (487)
+.|..|+++|.++|++|+|++||||||+|||||+|||||+++|+++|.|+++||.+++++++.+||||||+||++++++.
T Consensus 160 ~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~ 239 (468)
T TIGR00839 160 DAINQLRDGFEQKAKEFADILKMGRTQLQDAVPMTLGQEFEAFSILLEEEVKNIKRTAELLLEVNLGATAIGTGLNTPPE 239 (468)
T ss_pred HHHHHHHHHHHHHHHHccCCeeeccccCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeCCCcCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCCC
Q 011379 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIM 354 (487)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSiM 354 (487)
++.+|++++|++|||+.+..+|++|++++||+++|++++++.++++|+|||+||++|+|+|++|||||.+|..++|||||
T Consensus 240 ~~~~v~~~~a~~LGl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~~s~~~~~~~ev~~~~~~~gSS~M 319 (468)
T TIGR00839 240 YSPLVVKKLAEVTGLPCVPAENLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIM 319 (468)
T ss_pred HHHHHHHHHHHHhCCCCCCCccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceEEeCCCCCCCCCCC
Confidence 99999999999999998767899999999999999999999999999999999999999999999999999879999999
Q ss_pred CCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHH
Q 011379 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (487)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~ 434 (487)
||||||+.+|.++++|+++.|+..++.....+++++.+.++|.+..+++++++.+.+++..++..|+++|+||++||++|
T Consensus 320 PqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~vn~erm~~~ 399 (468)
T TIGR00839 320 PAKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQLNVMEPVIGQAMFESIHILTNACYNLTDKCVNGITANKEICEGY 399 (468)
T ss_pred CCCcCcHHHHHHHHHHHHHHhHHHHHHHHHhcCChHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999988676677788888888887888999999999999987789999999999999999
Q ss_pred HHh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCCC
Q 011379 435 LHE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 486 (487)
Q Consensus 435 l~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~~ 486 (487)
+.. .+||+.|+++++.+.++|++|+|+..+.+.++++++++++||++|++|+
T Consensus 400 l~~~~~~~~~La~~~g~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldP~~~v~~~ 461 (468)
T TIGR00839 400 VFNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLEKGLLTEEELDDIFSVENLMHPA 461 (468)
T ss_pred HHHhHHHHHHHhhHhhHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHHcCCC
Confidence 987 5799999999999999999999999998999999999999999999973
No 12
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=1.1e-99 Score=801.87 Aligned_cols=438 Identities=47% Similarity=0.742 Sum_probs=416.2
Q ss_pred cccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q 011379 38 REEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE 116 (487)
Q Consensus 38 r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~ 116 (487)
|+|+|++|+++||.+.+||.||+|++.||+++|. ++|++++++|++|++|+|.++.+.| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~--~~d~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~~i~~ 78 (450)
T cd01357 1 RIEHDLLGEREVPADAYYGIQTLRALENFPISGL--KIHPELIRALAMVKKAAALANAELGLLDEEKAEAIVKACDEIIA 78 (450)
T ss_pred CCCcccCCCcCCcccccchHHHHHHHHcCCCCCC--CcCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999986 7899999999999999999999999 999999999999999987
Q ss_pred cccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 011379 117 GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIP 195 (487)
Q Consensus 117 ~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~ 195 (487)
+...++|+++++++++++++|||+|++|+.++++.+|++.|+|. +|||||||+|+||||+++|+++|++++. +..+.+
T Consensus 79 ~~~~d~~~~~~~~~~~~~~~~~~~~~vi~~~~~e~~g~~~g~~~~~h~~~~vH~GrSrnD~v~Ta~~L~lr~~-l~~l~~ 157 (450)
T cd01357 79 GKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDVYPTALRLALILL-LRKLLD 157 (450)
T ss_pred ccccCCCccchhhccccchhhhhHhHHHHHHHHHHhCccccCCcccCCcccccCCCChHhHHHHHHHHHHHHH-HHHHHH
Confidence 66668899999999999999999999999988899986667754 9999999999999999999999998766 569999
Q ss_pred HHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCc
Q 011379 196 NLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGF 275 (487)
Q Consensus 196 ~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~ 275 (487)
.|..|+++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+||||||+||+++++++|
T Consensus 158 ~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGt~~~~~~~~ 237 (450)
T cd01357 158 ALAALQEAFQAKAREFADVLKMGRTQLQDAVPMTLGQEFGAYATALKRDRARIYKARERLREVNLGGTAIGTGINAPPGY 237 (450)
T ss_pred HHHHHHHHHHHHHHHccCCEeeccccCcccccchHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCCCC
Q 011379 276 DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMP 355 (487)
Q Consensus 276 ~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSiMP 355 (487)
+..+++++|++|||+.++.+|.+|++++||++++++++|++++++|+|||+||++|+|+||+|||||.+|++++||||||
T Consensus 238 ~~~v~~~~a~~LGl~~~~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~riA~Di~l~ss~e~~~~gev~~p~~~~GSSiMP 317 (450)
T cd01357 238 IELVVEKLSEITGLPLKRAENLIDATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSSGPRAGLGEINLPAVQPGSSIMP 317 (450)
T ss_pred HHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceeEECCCCCCcCCCCC
Confidence 99999999999999976788999999999999999999999999999999999999999999999999998899999999
Q ss_pred CCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHH
Q 011379 356 GKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLL 435 (487)
Q Consensus 356 ~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l 435 (487)
|||||+.+|.++++|+++.|+..++.+...+++++.|...|.+..+++.+++.+.+++..+...|+++|+||++||++|+
T Consensus 318 qKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~erm~~~l 397 (450)
T cd01357 318 GKVNPVIPEVVNQVAFQVIGNDLTITMAAEAGQLELNVFEPVIAYNLLESIDILTNAVRTLRERCIDGITANEERCREYV 397 (450)
T ss_pred CCcCcHHHHHHHHHHHHHhhHHHHHHHHHhcCcchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHH
Confidence 99999999999999999999998886666777888888888888889999999999999986589999999999999999
Q ss_pred Hh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccC
Q 011379 436 HE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVV 478 (487)
Q Consensus 436 ~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ld 478 (487)
+. .+||+.|+++++++.++|++|+|+..+.+.++++||++++|
T Consensus 398 ~~~~~~~t~La~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~el~~~~~ 450 (450)
T cd01357 398 ENSIGIVTALNPYIGYEAAAEIAKEALETGRSVRELVLEEGLLTEEELDEILS 450 (450)
T ss_pred HhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHhC
Confidence 87 68999999999999999999999999999999999999987
No 13
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=1.4e-96 Score=778.69 Aligned_cols=443 Identities=70% Similarity=1.058 Sum_probs=420.8
Q ss_pred cccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q 011379 38 REEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE 116 (487)
Q Consensus 38 r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~ 116 (487)
|||+|.+|++++|.+++||.+|.|+++||++|++ ..++++|++|++||+|+|+++++.| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~f~~~~~--~~~~~~i~~~l~ve~A~a~al~~~GiIp~~~a~~I~~al~~i~~ 78 (455)
T cd01362 1 RIEKDSMGEVEVPADALWGAQTQRSLENFPIGGE--RMPRELIRALGLLKKAAAQANAELGLLDEEKADAIVQAADEVIA 78 (455)
T ss_pred CCCcccCCCcCCccccchhHHHHHHHhccCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999987 6789999999999999999999999 999999999999999876
Q ss_pred cccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCcc-cccccccCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 011379 117 GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIP 195 (487)
Q Consensus 117 ~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~-iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~ 195 (487)
...++.|+.++.+++.+++.|||+|++|++++.+..|++.|+|. +|+++|||+|+||||+++|+++|++++.++..+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~~~~~~~vH~G~SrnDiv~Ta~~L~lr~~l~~~l~~ 158 (455)
T cd01362 79 GKLDDHFPLVVWQTGSGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQERLLP 158 (455)
T ss_pred cccccCCceehhhccccccccccHHHHHHHHHHHhcCcccCCcCcCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 55568899999999999999999999999877777787788775 89999999999999999999999987765456999
Q ss_pred HHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCc
Q 011379 196 NLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGF 275 (487)
Q Consensus 196 ~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~ 275 (487)
.|..|+++|.++|++|+|++||||||+|||||+||||||++|+++|.|+++||..++++++.+||||+|+||++++++.|
T Consensus 159 ~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~ 238 (455)
T cd01362 159 ALKHLIDALDAKADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALPRLYELALGGTAVGTGLNAHPGF 238 (455)
T ss_pred HHHHHHHHHHHHHHHccCCeeeccccCCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcCCeeccCCccCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred hHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCCCC
Q 011379 276 DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMP 355 (487)
Q Consensus 276 ~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSiMP 355 (487)
+..+++++|++|||+.++.+|++|++++||++++++++++.++.+|+|||+||++|+|+||+|||||.+|++++||||||
T Consensus 239 ~~~v~~~~a~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~l~ria~Dl~~~~s~~~~e~gev~~~~~~~GSS~MP 318 (455)
T cd01362 239 AEKVAAELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSLPENEPGSSIMP 318 (455)
T ss_pred HHHHHHHHHHHhCCCCccCCCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCCceEECCCCCCCCCCCC
Confidence 99999999999999977889999999999999999999999999999999999999999999999999999899999999
Q ss_pred CCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHH
Q 011379 356 GKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLL 435 (487)
Q Consensus 356 ~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l 435 (487)
|||||+.+|.++++|+++.|+..++..+...++++.+.+.+...|.+++.++.+.+++..++..|+++|+||++||++|+
T Consensus 319 qKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~~rm~~~l 398 (455)
T cd01362 319 GKVNPTQCEALTMVAAQVMGNDAAITIAGSSGNFELNVFKPVIIYNLLQSIRLLADACRSFADKCVAGIEPNRERIAELL 398 (455)
T ss_pred CCCCcHHHHHHHHHHHHHhhhHHHHHHHHhcCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHH
Confidence 99999999999999999999999998877888888888888778999999999999999998899999999999999999
Q ss_pred Hh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccc
Q 011379 436 HE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 482 (487)
Q Consensus 436 ~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~ 482 (487)
+. .+||++|+++++++.++|.+|+|++.+++.++++|+++++||+++
T Consensus 399 ~~~~~~~~~La~~ig~~~A~~l~~~a~~~~~~l~~~~~~~~~~~~~el~~~~dp~~~ 455 (455)
T cd01362 399 ERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKEAALELGYLTEEEFDRLVDPEKM 455 (455)
T ss_pred HhcchhHHHhccccCHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHHHhcCcccC
Confidence 77 689999999999999999999999998899999999999999875
No 14
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=1.3e-92 Score=747.04 Aligned_cols=438 Identities=59% Similarity=0.881 Sum_probs=415.2
Q ss_pred cccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q 011379 38 REEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE 116 (487)
Q Consensus 38 r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~ 116 (487)
|+|+|.+|++++|.+++||.++.|.+++|+++++ +++++++++|++|+.|+|+++.+.| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~i~~ 78 (450)
T cd01596 1 RIEKDSLGEVEVPADAYYGAQTQRALENFPISGE--RMPPELIRALALVKKAAALANAELGLLDEEKADAIVQACDEVIA 78 (450)
T ss_pred CCCcccCCCCCCcccccccHhHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHc
Confidence 8999999999999999999999999999999976 6899999999999999999999999 999999999999999987
Q ss_pred cccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCCccccccccc-CCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 011379 117 GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHV-NRSQSSNDTFPTVMHIAAAMETNSRLIP 195 (487)
Q Consensus 117 ~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hv-n~G~SsnDi~~Ta~~l~~~~~~~~~l~~ 195 (487)
+..++.|+.++.+++.+++.|+|+|++|+.++.+.+|+..|+|.+||++|| |+|+||||+++|+++|++++. +..+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~h~~~~v~h~g~SrnD~v~t~~~L~lr~~-l~~l~~ 157 (450)
T cd01596 79 GKLDDQFPLDVWQTGSGTSTNMNVNEVIANRALELLGGKKGKYPVHPNDDVNNSQSSNDDFPPAAHIAAALAL-LERLLP 157 (450)
T ss_pred CcccCCCcccHHhccCcccccchHHHHHHHHHHHHhccccCCcccCCCcccCCCCCCchHHHHHHHHHHHHHH-HHHHHH
Confidence 666788999998888899999999999998777888855676658999999 699999999999999998655 579999
Q ss_pred HHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCc
Q 011379 196 NLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGF 275 (487)
Q Consensus 196 ~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~ 275 (487)
.|..|+++|.++|++|+|++||||||+|+|||+|||||+++|+++|.|+++||..++++++.+||||||+||++++++.|
T Consensus 158 ~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGg~A~Gt~~~~~~~~ 237 (450)
T cd01596 158 ALEQLQDALDAKAEEFADIVKIGRTHLQDAVPLTLGQEFSGYAAQLARDIARIEAALERLRELNLGGTAVGTGLNAPPGY 237 (450)
T ss_pred HHHHHHHHHHHHHHHhcCCeeeccccccCCeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcceeCCCCCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred hHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCCCC
Q 011379 276 DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMP 355 (487)
Q Consensus 276 ~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSiMP 355 (487)
+..+++++|++|||+.++.+|++||+++||+++++++++++++.+|+|||+||++|+|+||+|||||.+|++++||||||
T Consensus 238 ~~~v~~~~a~~LGl~~~~~~n~~d~~~~rd~~~e~~~~la~~~~~l~ria~Dl~~~ss~~~~e~gev~~~~~~~GSS~MP 317 (450)
T cd01596 238 AEKVAAELAELTGLPFVTAPNLFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSSGPRAGLGEINLPANQPGSSIMP 317 (450)
T ss_pred HHHHHHHHHHHhCCCCccCcCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCeeEECCCCCCCCCCCC
Confidence 99999999999999976889999999999999999999999999999999999999999999999999999889999999
Q ss_pred CCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHH
Q 011379 356 GKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLL 435 (487)
Q Consensus 356 ~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l 435 (487)
|||||+.+|.|+++|+++.|+..++.....+.++|++...|.+.++++++++.+.+++..++..++++|+||++||++|+
T Consensus 318 qKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l 397 (450)
T cd01596 318 GKVNPVIPEAVNMVAAQVIGNDTAITMAGSAGQLELNVFKPVIAYNLLQSIRLLANACRSFRDKCVEGIEANEERCKEYV 397 (450)
T ss_pred CCCCCHHHHHHHHHHHHHhccHHHHHHHhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHH
Confidence 99999999999999999999999998788999999988888777889999999999999998899999999999999999
Q ss_pred Hh----------hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccC
Q 011379 436 HE----------KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVV 478 (487)
Q Consensus 436 ~~----------~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ld 478 (487)
+. .+||+.++++++++.++|++|+++..+.+.++++++++++|
T Consensus 398 ~~~~~~~t~LA~~lg~~~a~~~v~~a~~~g~~l~~~~~~~~~~~~~~l~~~~d 450 (450)
T cd01596 398 ENSLMLVTALNPHIGYEKAAEIAKEALKEGRTLREAALELGLLTEEELDEILD 450 (450)
T ss_pred HhCcchHHHHhHHHhHHHHHHHHHHHHHcCCCHHHHHHHhCCCCHHHHHHHhC
Confidence 77 58999999999999999999999999889999999999987
No 15
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=8.8e-81 Score=660.24 Aligned_cols=400 Identities=24% Similarity=0.313 Sum_probs=353.4
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCccccccc
Q 011379 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQT 130 (487)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~ 130 (487)
+.+||...++++ |+ ++++|++|++||+|+|.||+++| ||++.+++|.++|++ ++|+++.+++
T Consensus 9 ~~~~~~~~~~~i--~s--------~~~~i~a~l~ve~A~A~a~~~~G~ip~~~a~~I~~a~~~-------~~~d~~~~~~ 71 (452)
T PRK09053 9 DLYFGSPAMRAI--FS--------DRATVQRMLDFEAALARAEAACGVIPAAAVAPIEAACDA-------ERLDLDALAQ 71 (452)
T ss_pred hhhcCCHHHHHH--cC--------cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccc-------cCCCHHHHHH
Confidence 459999999999 74 78999999999999999999999 999999999999875 4588999999
Q ss_pred CcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 131 GSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVE 210 (487)
Q Consensus 131 ~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~ 210 (487)
+++++.|..+. . -+.+.+.+|. .. .|+++|||+|+||||++||+++|++++. +..+.+.|..|+++|.+||++
T Consensus 72 ~~~~~~~~~~~-l-v~~l~~~~~~---~~-~~~~~~vH~G~SsnDi~~Ta~~l~lr~~-l~~l~~~l~~l~~~L~~~A~~ 144 (452)
T PRK09053 72 AAALAGNLAIP-L-VKQLTAQVAA---RD-AEAARYVHWGATSQDIIDTGLVLQLRDA-LDLLEPDLDRLCDALATLAAR 144 (452)
T ss_pred HHhhcCCchHH-H-HHHHHHHhcc---cC-cchhccccCCCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 99988885543 2 1334555552 22 6889999999999999999999997655 579999999999999999999
Q ss_pred cccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCCC
Q 011379 211 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLP 290 (487)
Q Consensus 211 ~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~ 290 (487)
|+||+|+||||+|||+||||||||++|+++|.|+++||.+++++++.+|||| |+||+ +..++++..+.+++++.|||+
T Consensus 145 ~~~t~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg-avGt~-~~~~~~~~~v~~~~a~~LGl~ 222 (452)
T PRK09053 145 HRATPMVGRTWLQQALPVTLGLKFAGWLDALLRHRQRLAALRPRALVLQFGG-AAGTL-ASLGEQALPVAQALAAELQLA 222 (452)
T ss_pred ccCCeeehhccCCcceechHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc-hhhcc-cccccchHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999 69994 445678889999999999999
Q ss_pred CccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCC--CCCCCCCCCCCCChhhhHHHHH
Q 011379 291 FVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTM 368 (487)
Q Consensus 291 ~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~--~~~GSSiMP~K~NP~~~E~i~~ 368 (487)
.+..+| +++||++++++++|+.++++|+|||+||++|+ ++|||||.+|. +++|||||||||||+.+|.+++
T Consensus 223 ~~~~~~----~~~rD~~~e~~~~la~la~~L~kia~Di~ll~---~~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~i~~ 295 (452)
T PRK09053 223 LPALPW----HTQRDRIAEFASALGLLAGTLGKIARDVSLLM---QTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLT 295 (452)
T ss_pred CCCCCc----ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchhhccccCCCCCcCCCCCCCCchHHHHHHH
Confidence 866554 58999999999999999999999999999999 68999998885 4799999999999999999999
Q ss_pred HHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh-----------
Q 011379 369 VCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE----------- 437 (487)
Q Consensus 369 ~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~----------- 437 (487)
+|+++.|+..++ +.+..+++|+|.+.|.++|..++.+..+...+...+..|+++|+||++||++|++.
T Consensus 296 ~a~~v~g~~~~~-~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~erm~~~l~~s~~~~~ae~~~ 374 (452)
T PRK09053 296 AATRAPGLVATL-FAAMPQEHERALGGWHAEWDTLPELACLAAGALAQMAQIVEGLEVDAARMRANLDLTHGLILAEAVM 374 (452)
T ss_pred HHHHHHHHHHHH-HHhChhhhcccCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhcCCHHHHHHHH
Confidence 999999999887 56778899999999999895555555444444444469999999999999999965
Q ss_pred -----hhcHHHHHHH----HHHHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 438 -----KIGYDNAAAV----AKKAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 -----~ig~~~A~~i----a~~a~~~g~~~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
.+||++|+++ ++++.++|++|+|++.++ +.++++++++++||++|+|.
T Consensus 375 ~~La~~lgr~~Ah~iV~~~~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~l~P~~~~g~ 435 (452)
T PRK09053 375 LALADRIGRLDAHHLVEQASKRAVAEGRHLRDVLAEDPQVSAHLSPAALDRLLDPAHYLGQ 435 (452)
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHCCCHHHHHHhChhhhccCCHHHHHHHcCHHHHhcc
Confidence 5899999988 667788999999999886 68999999999999999995
No 16
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.3e-76 Score=626.40 Aligned_cols=400 Identities=22% Similarity=0.317 Sum_probs=343.6
Q ss_pred cccCccChH----hHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCc
Q 011379 50 PSDKLWGAQ----TQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFP 124 (487)
Q Consensus 50 p~~~~~g~~----t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~ 124 (487)
+.+++||++ +.|+++||+++ . ++|+.++++++.+++|++.++.+.| ||++++++|.++|+++.++...+.|+
T Consensus 2 ~~~~~~g~~~~~~~~~~~~~~~~s-~--~~~~~~~~~~~~~~~Aha~~l~~~G~l~~~~a~~i~~al~~i~~~~~~~~~~ 78 (459)
T PRK00855 2 MSNKLWGGRFSEGPDELVERFTAS-I--SFDKRLAEEDIAGSIAHARMLAKQGILSEEEAEKILAGLDEILEEIEAGKFE 78 (459)
T ss_pred CcccccccCCCcchHHHHHHcccC-c--cchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCcc
Confidence 356799988 99999999888 3 6889999999999999999999999 99999999999999998877778899
Q ss_pred ccccccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 125 LVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSL 204 (487)
Q Consensus 125 ~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L 204 (487)
+++ +++|+||| |++++++++| +.|+| || +|+||||+++|+++|++++.+ ..+.+.|..|+++|
T Consensus 79 ~~~----~~~d~~~~----ie~~l~~~~g-~~g~~-iH------~g~SrnD~~~Ta~~L~~r~~l-~~l~~~L~~l~~~L 141 (459)
T PRK00855 79 FSP----ELEDIHMA----IEARLTERIG-DVGGK-LH------TGRSRNDQVATDLRLYLRDEI-DEIAELLLELQKAL 141 (459)
T ss_pred cCC----CCCcHHHH----HHHHHHHHhc-cccCc-cc------CCCCHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 876 57787877 7889999999 77777 88 599999999999999987664 68999999999999
Q ss_pred HHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHH
Q 011379 205 HSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAV 283 (487)
Q Consensus 205 ~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~l 283 (487)
.++|++|+||+||||||+|||||+|||||+++|+++|.|+++||.+++++++.+||||+|+ ||++++++ +++
T Consensus 142 ~~~A~~~~~t~m~GrTH~Q~A~P~T~G~~l~~~~~~L~r~~~rL~~~~~~~~~~plGgaag~gt~~~~~r-------~~~ 214 (459)
T PRK00855 142 LDLAEEHADTIMPGYTHLQRAQPVTFGHHLLAYAEMLARDLERLRDARKRVNRSPLGSAALAGTTFPIDR-------ERT 214 (459)
T ss_pred HHHHHHcCCCEeecCcCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhcCCCCCcCH-------HHH
Confidence 9999999999999999999999999999999999999999999999999999999999887 89888776 579
Q ss_pred HHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhh
Q 011379 284 AEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQ 362 (487)
Q Consensus 284 a~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~ 362 (487)
+++|||+. +..|++||+++||++++++++|+.++++|+|||+||++|+|+ |||||.+|+. ++|||||||||||+.
T Consensus 215 a~~LG~~~-~~~n~~~a~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~ss~---e~gei~~p~~~~~gSSiMPqK~NP~~ 290 (459)
T PRK00855 215 AELLGFDG-VTENSLDAVSDRDFALEFLSAASLLMVHLSRLAEELILWSSQ---EFGFVELPDAFSTGSSIMPQKKNPDV 290 (459)
T ss_pred HHHcCCCC-CCCCHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc---CCCeEeCCCCCCCCcCCCCCCCCCHH
Confidence 99999998 789999999999999999999999999999999999999974 8999999986 599999999999999
Q ss_pred hHHHHHHHHHhhcchHHHHHhcccc--chhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhc
Q 011379 363 CEALTMVCAQVIGNHVAITVGGSNG--HFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIG 440 (487)
Q Consensus 363 ~E~i~~~a~~v~G~~~~~~~~~~~~--~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig 440 (487)
+|.++++|+++.|+..++.....+. .++++.... -..+++++..+.+++..+. .|+++|+||+++|+++++. |
T Consensus 291 ~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rD~~~~--~~~l~~~~~~~~~al~~~~-~~l~~l~v~~~~m~~~l~~--~ 365 (459)
T PRK00855 291 AELIRGKTGRVYGNLTGLLTVMKGLPLAYNRDLQED--KEPLFDAVDTLKLSLEAMA-GMLETLTVNKERMREAAGK--G 365 (459)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhcCchHHhhhhhhhh--HHHHHHHHHHHHHHHHHHH-HHHccCEECHHHHHHHHHc--c
Confidence 9999999999999998887533322 344433221 1247788888888888885 5999999999999999977 4
Q ss_pred HHHHHHHHHHHHHcCCCHHHHH---------------------HHc----CCCCHHHHhhccCcccccCC
Q 011379 441 YDNAAAVAKKAHKEGTTLKDAA---------------------LKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 441 ~~~A~~ia~~a~~~g~~~re~~---------------------~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
+..+++++..++++|++||+++ .+. ..+.++++.+++||+.++..
T Consensus 366 ~~~at~la~~Lv~~gi~~r~Ah~~v~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 435 (459)
T PRK00855 366 FSTATDLADYLVRKGVPFREAHEIVGKAVREAEERGVDLADLSLEELQAFSPLITEDVYEVLTPEGSVAA 435 (459)
T ss_pred hhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHhcccchHHHHHHhChHHHHHh
Confidence 4444444444444444444443 322 23446678889999988753
No 17
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=2e-76 Score=625.38 Aligned_cols=397 Identities=24% Similarity=0.318 Sum_probs=343.8
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCccccccc
Q 011379 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQT 130 (487)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~ 130 (487)
+.+||...++.+ |+ ++++|++|+.||.|++.++.+.| ||++++++|.++++++. +..+.++.
T Consensus 3 ~~~y~~~~~~~~--~s--------~~~~i~~~~~ve~A~a~~l~~~Gii~~~~a~~I~~al~~~~-------~~~~~~~~ 65 (437)
T cd01597 3 GDLFGTPAMREI--FS--------DENRVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADVER-------LDLEALAE 65 (437)
T ss_pred ccccCCHHHHHH--cC--------cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccccC-------CCHHHHHH
Confidence 458999999999 74 78999999999999999999999 99999999999987651 11233433
Q ss_pred CcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 131 GSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVE 210 (487)
Q Consensus 131 ~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~ 210 (487)
+.+++.|.. ..++..+.+++|++.|+| +| +|+||||+++|+++|++++. +..+.+.|..|+++|.++|++
T Consensus 66 ~~~~~~~~v--~a~e~~l~e~~g~~~g~~-lH------~grSrnD~~~Ta~~l~lr~~-l~~l~~~l~~l~~~L~~~A~~ 135 (437)
T cd01597 66 ATARTGHPA--IPLVKQLTAACGDAAGEY-VH------WGATTQDIIDTALVLQLRDA-LDLLERDLDALLDALARLAAT 135 (437)
T ss_pred HHHHhCCCc--HHHHHHHHHHcCccccCe-ee------cCccHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 334443332 235667788999666878 88 59999999999999998766 479999999999999999999
Q ss_pred cccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCCC
Q 011379 211 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLP 290 (487)
Q Consensus 211 ~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~ 290 (487)
|+|++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|||| |+|||.+. +.++..+.++++++|||+
T Consensus 136 ~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-a~Gtg~~~-~~~~~~~~~~~a~~LGf~ 213 (437)
T cd01597 136 HRDTPMVGRTHLQHALPITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGG-AAGTLASL-GDQGLAVQEALAAELGLG 213 (437)
T ss_pred hcCCeeehhhcCccceechHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc-cccccccc-CCcHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999 88988754 456778899999999999
Q ss_pred CccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCC--CCCCCCCCCCCCChhhhHHHHH
Q 011379 291 FVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTM 368 (487)
Q Consensus 291 ~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~--~~~GSSiMP~K~NP~~~E~i~~ 368 (487)
.+..+ |+++||++++++++++.++.+|+|||+||++|+ ++|||||.+|+ .++||||||||+||+.+|.+++
T Consensus 214 ~~~~~----~~~~rd~~~e~~~~l~~~a~~l~rla~Dl~l~s---~~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~i~~ 286 (437)
T cd01597 214 VPAIP----WHTARDRIAELASFLALLTGTLGKIARDVYLLM---QTEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVA 286 (437)
T ss_pred CCCCc----cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccceeecccCCCCCCCCCCCCCcCcHHHHHHHH
Confidence 85433 579999999999999999999999999999999 56899999997 6999999999999999999999
Q ss_pred HHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh-----------
Q 011379 369 VCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE----------- 437 (487)
Q Consensus 369 ~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~----------- 437 (487)
+|+++.|+.+++ +....+++++|.+.|...|..++....+...+..++..|+++|+||++||+++++.
T Consensus 287 ~a~~~~g~~~~~-~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~ae~l~ 365 (437)
T cd01597 287 LARRVPGLAALL-LDAMVQEHERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDLTGGLILSEAVM 365 (437)
T ss_pred HHHHHHHHHHHH-HHhchhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHH
Confidence 999999996655 44566889999988888888776555555555557789999999999999999864
Q ss_pred -----hhcHHHHHHH----HHHHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 438 -----KIGYDNAAAV----AKKAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 -----~ig~~~A~~i----a~~a~~~g~~~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
.+||+.||++ ++++.++|.++++.+.+. +.++++++++++||++|+|+
T Consensus 366 ~~l~~~i~~~~Ah~~v~~~~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~v~~ 426 (437)
T cd01597 366 MALAPKLGRQEAHDLVYEACMRAVEEGRPLREVLLEDPEVAAYLSDEELDALLDPANYLGS 426 (437)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhccCCHHHHHHhcCHHHHhcc
Confidence 4899999987 556777899999998876 67899999999999999986
No 18
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=1.7e-75 Score=620.62 Aligned_cols=401 Identities=20% Similarity=0.233 Sum_probs=345.4
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCc
Q 011379 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGS 132 (487)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~~~ 132 (487)
+|+..+...+..|..+- ..+..+++..+.++.|++.++.+.| ||++++++|.++|+++.++...+.|++++++
T Consensus 5 r~~~~~~~~~~~~~~~~---~~d~~l~~~~i~~~~Ah~~~L~~~G~l~~~~a~~I~~al~~i~~~~~~~~~~~~~~~--- 78 (455)
T TIGR00838 5 RFTGGMDPRVAKFNASL---SFDKELAEYDIEGSIAHTKMLKKAGILTEEEAAKIIEGLNELKEEGREGPFILDPDD--- 78 (455)
T ss_pred cCCCCccHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCcCCCCCc---
Confidence 34333344455563221 3467888888889999999999999 9999999999999999988777889988875
Q ss_pred ccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 011379 133 GTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFK 212 (487)
Q Consensus 133 ~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~~ 212 (487)
+|+| .+|++++.+++|++.|+| +| +|+||||+++|+++|++++.+ ..+.+.|..|+++|.++|++|+
T Consensus 79 -~d~~----~~ie~~l~e~~g~~~g~~-iH------~g~SrnD~~~Ta~~L~lr~~l-~~l~~~L~~l~~~L~~~A~~~~ 145 (455)
T TIGR00838 79 -EDIH----MAIERELIDRVGEDLGGK-LH------TGRSRNDQVATDLRLYLRDHV-LELAEALLDLQDALIELAEKHV 145 (455)
T ss_pred -CcHH----HHHHHHHHHHhCCCccCC-cc------CCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcc
Confidence 4444 468999999999777888 88 599999999999999987765 6899999999999999999999
Q ss_pred cccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHHHcCCCC
Q 011379 213 DIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPF 291 (487)
Q Consensus 213 d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl~~ 291 (487)
|++||||||+||||||||||||++|+++|.|+++||.+++++++.+||||||+ ||++++++ +++++.|||+.
T Consensus 146 ~~~m~grTH~Q~A~P~T~G~~~~~~~~~L~r~~~rL~~~~~~~~~~plGg~a~aGt~~~~~r-------~~~a~~LG~~~ 218 (455)
T TIGR00838 146 ETLMPGYTHLQRAQPITLAHHLLAYAEMLLRDYERLQDALKRVNVSPLGSGALAGTGFPIDR-------EYLAELLGFDA 218 (455)
T ss_pred CCEeecccccccceeccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhcccCCCCCCCH-------HHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999998 99988776 47999999998
Q ss_pred ccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhHHHHHHH
Q 011379 292 VTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVC 370 (487)
Q Consensus 292 ~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a 370 (487)
+..|++||+++||++++++++++.++++|+|||+||++|+|+ |||||.+|+. ++|||||||||||+.+|.++++|
T Consensus 219 -~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~ss~---e~gei~lp~~~~~GSSiMP~K~NP~~~E~i~~~a 294 (455)
T TIGR00838 219 -VTENSLDAVSDRDFILELLFVAALIMVHLSRFAEDLILWSTG---EFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKT 294 (455)
T ss_pred -CcCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCeeeCCCCCCCccCCCCCCcCChHHHHHHHHH
Confidence 588999999999999999999999999999999999999975 5999999986 89999999999999999999999
Q ss_pred HHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh-------------
Q 011379 371 AQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE------------- 437 (487)
Q Consensus 371 ~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~------------- 437 (487)
+++.|+..++..+..+.++++|...+.....+++++..+..++..+. .|+++|+||+++|++|+..
T Consensus 295 ~~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~al~~~~-~~i~~l~v~~~rm~~~~~~~~~~at~la~~Lv 373 (455)
T TIGR00838 295 GRVQGNLTGMLMTLKALPLAYNRDLQEDKEPLFDALKTVELSLEMAT-GMLDTITVNKERMEEAASAGFSNATELADYLV 373 (455)
T ss_pred HHHhhhHHHHHHHHhcCChHhhhhhHhhHHHHHHHHHHHHHHHHHHH-HHHccCEECHHHHHHHHHcCccHHHHHHHHHH
Confidence 99999999998777777776665555555568888899999999985 5999999999999999876
Q ss_pred --hhcHHHHHH----HHHHHHHcCCCHHHHHHHcC----CCCHHHHhhccCcccccCC
Q 011379 438 --KIGYDNAAA----VAKKAHKEGTTLKDAALKLG----VLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 --~ig~~~A~~----ia~~a~~~g~~~re~~~~~~----~l~~eel~~~ldP~~~~g~ 485 (487)
.+||++||+ +++++.++|++++|+..+.. .+.++++++++||+.|+..
T Consensus 374 ~~g~~~r~Ah~~v~~~~~~a~~~g~~l~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~ 431 (455)
T TIGR00838 374 RKGVPFREAHHIVGELVATAIERGKGLEELTLEELQKFSPEFDEDVYEALDPESSVEK 431 (455)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhhcccCHHHHHHHCCHHHHHHh
Confidence 245555553 44456677888888776653 2567779999999999853
No 19
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-75 Score=602.44 Aligned_cols=379 Identities=23% Similarity=0.307 Sum_probs=335.2
Q ss_pred cCccCh----HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCccc
Q 011379 52 DKLWGA----QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLV 126 (487)
Q Consensus 52 ~~~~g~----~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~ 126 (487)
+++||. .+...+.+|+.|. ..|..+...=+..-.|++.++.+.| |+++++++|.+++.++.++...+.|.++
T Consensus 3 ~~lwggRf~~~~~~~~~~~~~Si---~~D~~l~~~di~~s~AH~~mL~~~Gii~~ee~~~I~~~L~~l~~e~~~g~~~~~ 79 (459)
T COG0165 3 NKLWGGRFSGGPDPLVKEFNASI---SFDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEEIRAGKFELD 79 (459)
T ss_pred CCCCCCCccCCCcHHHHHHhccc---hhHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCCccCC
Confidence 356664 4455677787774 4678888888888999999999999 9999999999999999865444556665
Q ss_pred ccccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 127 VWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHS 206 (487)
Q Consensus 127 ~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~ 206 (487)
+- .+| +|.+||+++++++| +.|+| +|+ ||||||++.|+++||+++++ ..|...+..|+++|++
T Consensus 80 ~~----~ED----vH~aiE~~L~~~iG-~~ggk-Lht------gRSRNDQVatd~rL~lr~~~-~~l~~~i~~l~~aL~~ 142 (459)
T COG0165 80 PD----DED----VHTAIEARLIERIG-DVGGK-LHT------GRSRNDQVATDLRLWLRDKL-LELLELIRILQKALLD 142 (459)
T ss_pred Cc----ccc----HHHHHHHHHHHHHh-hhhch-hcc------ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 42 344 55668999999999 89999 996 89999999999999998876 6999999999999999
Q ss_pred HHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHH
Q 011379 207 KSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAE 285 (487)
Q Consensus 207 ~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~ 285 (487)
+|++|.+++||||||+|+|||+|||||+.+|++.|.||++||.+++++++.+|||.||. ||++++|| +++|+
T Consensus 143 ~Ae~~~~~imPGyTHlQ~AQPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR-------~~tA~ 215 (459)
T COG0165 143 LAEEHAETVMPGYTHLQRAQPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDR-------ERTAE 215 (459)
T ss_pred HHHHccCCccCCcccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCH-------HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 99999998 68999
Q ss_pred HcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhH
Q 011379 286 ETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCE 364 (487)
Q Consensus 286 ~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E 364 (487)
+|||+. +..|++|++++||+++|+++++++++.+|+|||+||++|+|. |||+|++|+. .+|||||||||||+.+|
T Consensus 216 lLGF~~-~~~Nsldavs~Rdf~le~l~~~s~~~~~LSRlaedlI~wss~---EfgfI~l~D~~sTGSSIMPQKKNPD~~E 291 (459)
T COG0165 216 LLGFDA-VTRNSLDAVSDRDFILEFLSAAALIMVHLSRLAEDLILWSSP---EFGFIELPDEFSTGSSIMPQKKNPDVLE 291 (459)
T ss_pred HcCCch-hhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---cCceEeCCcccccccccCCCCCCCcHHH
Confidence 999998 799999999999999999999999999999999999999984 7999999987 89999999999999999
Q ss_pred HHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhcHHHH
Q 011379 365 ALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIGYDNA 444 (487)
Q Consensus 365 ~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig~~~A 444 (487)
.+|+++++|.|+..+++.....-++-+|-=.-..-..+++++..+..++..+ ..++++|+||+++|++.+.. ||..|
T Consensus 292 LiRgk~grv~G~l~~ll~~~k~lPlaYnrDlQedke~lfds~~t~~~~l~~~-~~mv~~l~vn~e~~~~a~~~--gfs~a 368 (459)
T COG0165 292 LIRGKAGRVIGALTGLLTIMKGLPLAYNRDLQEDKEPLFDSVDTLEDSLRVL-AGMVSGLTVNKERMREAAEA--GFSTA 368 (459)
T ss_pred HHHHhhhhhHHHHHHHHHHHhcCcccccHHHHhhhHHHHHHHHHHHHHHHHH-HHHHccCeeCHHHHHHHhhc--ccchH
Confidence 9999999999999988876544444433100011233789999999999998 57999999999999999988 99999
Q ss_pred HHHHHHHHHcCCCHHHHHHH
Q 011379 445 AAVAKKAHKEGTTLKDAALK 464 (487)
Q Consensus 445 ~~ia~~a~~~g~~~re~~~~ 464 (487)
+++|.+++++|+||||++..
T Consensus 369 TdlAd~lv~kGvPFReAh~i 388 (459)
T COG0165 369 TDLADYLVRKGVPFREAHEI 388 (459)
T ss_pred HHHHHHHHHcCCCHHHHHHH
Confidence 99999999999999999774
No 20
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=8.6e-76 Score=620.00 Aligned_cols=394 Identities=25% Similarity=0.300 Sum_probs=344.7
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCccccc--
Q 011379 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVW-- 128 (487)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~-- 128 (487)
|.+||.+.++++ |+ +++++++|++|++|++.+++++| ||++++++|.+++ ++.. ++++.+
T Consensus 2 ~~~y~~~~~~~i--fs--------~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~~-~~~~------~d~~~l~~ 64 (435)
T TIGR00928 2 DERYGTPEMRAI--WS--------EENKFKTWLDVEVALLRALAELGVIPAEAVKEIRAKA-NFTD------VDLARIKE 64 (435)
T ss_pred CcccCcHHHHHH--hC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhC-CCCc------cCHHHHHH
Confidence 468999999999 74 78999999999999999999999 9999999998872 1110 111111
Q ss_pred -ccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 129 -QTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSK 207 (487)
Q Consensus 129 -~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~ 207 (487)
....+.+ + ..+++.+.+.+| +.|+| +| +|+||||+++|+++|++++. +..+.+.|..|+++|.++
T Consensus 65 ~~~~~~~~----v-~~~e~~l~~~~g-~~~~~-vh------~g~SsnD~~~Ta~~l~lr~~-l~~l~~~l~~l~~~L~~~ 130 (435)
T TIGR00928 65 IEAVTRHD----V-KAVVYALKEKCG-AEGEF-IH------FGATSNDIVDTALALLLRDA-LEIILPKLKQLIDRLKDL 130 (435)
T ss_pred HHHHHCcC----h-HHHHHHHHHHhh-hhhhh-ee------ecccHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 0001111 1 236788888898 67777 77 59999999999999998766 579999999999999999
Q ss_pred HHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHc
Q 011379 208 SVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEET 287 (487)
Q Consensus 208 A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~L 287 (487)
|++|+|++||||||+||||||||||||++|+++|.|+++||.+++++++.+|+|| |+||+++++++| ..+.++++++|
T Consensus 131 A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgG-a~Gt~~~~~~~~-~~~~~~~a~~L 208 (435)
T TIGR00928 131 AVEYKDTVMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLLQAKERIKVGGISG-AVGTHAAAYPLV-EEVEERVTEFL 208 (435)
T ss_pred HHHHccchHhHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-hhhhHhhccccH-HHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999988 899999999887 78999999999
Q ss_pred CCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCC--CCCCCCCCCCCCChhhhHH
Q 011379 288 SLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEA 365 (487)
Q Consensus 288 Gl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~--~~~GSSiMP~K~NP~~~E~ 365 (487)
||+.+..+| ++++||++++++++++.++.+|+|||+||++|+ ++||+|+.+|. +++|||||||||||+.+|+
T Consensus 209 Gl~~~~~~~---~~~~rD~~~e~~~~l~~la~~L~ria~Dl~l~s---~~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~ 282 (435)
T TIGR00928 209 GLKPVPIST---QIEPRDRHAELLDALALLATTLEKFAVDIRLLQ---RTEHFEVEEPFGKGQVGSSAMPHKRNPIDFEN 282 (435)
T ss_pred CCCCCCCCc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccccceecccCCCCCCcCCCCcCcCcHHHHH
Confidence 999865444 689999999999999999999999999999999 46899999986 3899999999999999999
Q ss_pred HHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh--------
Q 011379 366 LTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE-------- 437 (487)
Q Consensus 366 i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~-------- 437 (487)
++++|+++.|+..++.. ...+++|+|...|.+.|+++++++.+..++..++.+|+++|+||++||++|++.
T Consensus 283 i~~~a~~~~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~a~ 361 (435)
T TIGR00928 283 VCGLARVIRSVLSPALE-NVPLWHERDLTDSSVERIILPDSFILADIMLKTTLKVVKKLVVNPENILRNLELTLGLIASE 361 (435)
T ss_pred HHHHHHHHHHHHHHHHH-HhhHHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHhHH
Confidence 99999999999877654 446789999999999999899999999999999999999999999999999874
Q ss_pred ---------hhcHHHHHHH----HHHHHH-cCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 438 ---------KIGYDNAAAV----AKKAHK-EGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 ---------~ig~~~A~~i----a~~a~~-~g~~~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
.+||+.||++ ++.+.+ +|.+|++.+.++ +.++++++++++||++|+|.
T Consensus 362 ~la~~L~~~g~g~~~Ah~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ldp~~~~~~ 427 (435)
T TIGR00928 362 RVLIALVERGMGREEAYEIVRELAMGAAEVDEPDLLEFLLADERITKYLKEEELAELLDPETYIGN 427 (435)
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHcccccHHHHHhhCccchhhcCHHHHHHcCCHHHHhCh
Confidence 4789999884 556667 899999998876 57899999999999999985
No 21
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=4.3e-75 Score=616.65 Aligned_cols=399 Identities=26% Similarity=0.301 Sum_probs=344.7
Q ss_pred ccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH--HHccccCCCCcc
Q 011379 49 VPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQE--VAEGKLNDHFPL 125 (487)
Q Consensus 49 ~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~--v~~~~~~~~f~~ 125 (487)
.|.+.+||...++++ |+ |++++++|++||.|++.++.+.| ||++++++|.+++.+ +...... ..
T Consensus 4 ~~~~~~~~~~~~~~~--~s--------~~~~~~~~l~ve~A~a~~l~~~Giip~~~a~~I~~~l~~~~i~~~~~~-~~-- 70 (449)
T PRK08540 4 HPIDYRYGTPEMKRV--WS--------EENKLQKMLDVEAALARAEAELGLIPEEAAEEINRKASTKYVKLERVK-EI-- 70 (449)
T ss_pred CCcCcccCCHHHHHH--cC--------hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHHHH-HH--
Confidence 578889999999999 74 78999999999999999999999 999999999999876 4211100 00
Q ss_pred cccccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 126 VVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLH 205 (487)
Q Consensus 126 ~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~ 205 (487)
.. ..+.++ + .+++.+.+.+|++.|+| +| +|+||||+++|+++|++++. +..+.+.|..|+++|.
T Consensus 71 ~~---~~~~~v-~----~~e~~L~~~~~~~~~~~-vH------~g~S~nDi~~Ta~~L~lr~~-l~~l~~~L~~l~~~L~ 134 (449)
T PRK08540 71 EA---EIHHDI-M----AVVKALSEVCEGDAGEY-VH------FGATSNDIIDTATALQLKDS-LEILEEKLKKLRGVLL 134 (449)
T ss_pred HH---HhCCCc-H----HHHHHHHHHhhhhhhcc-ee------cCccHhhHHhHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 00 011111 2 35778888896677888 88 59999999999999998766 5799999999999999
Q ss_pred HHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHH
Q 011379 206 SKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAE 285 (487)
Q Consensus 206 ~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~ 285 (487)
++|++|+|++||||||+||||||||||||++|+++|.|+++||..++++++.+|||| ||||+.. .++++..+.+++++
T Consensus 135 ~~A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-avGt~~a-~~~~~~~i~~~~a~ 212 (449)
T PRK08540 135 KKAEEHKNTVCIGRTHGQHAVPTTYGMRFAIWASEIQRHLERLEQLKPRVCVGQMTG-AVGTQAA-FGEKGIEIQKRVME 212 (449)
T ss_pred HHHHHhcCCchhhhcCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHhhheccccc-cccchhh-CCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999764 35677788899999
Q ss_pred HcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEc--CCCCCCCCCCCCCCChhhh
Q 011379 286 ETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELIL--PENEPGSSIMPGKVNPTQC 363 (487)
Q Consensus 286 ~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~l--p~~~~GSSiMP~K~NP~~~ 363 (487)
+|||+.+..+| ++++||++++++++++.++++|+|||+||++|+ ++|||||.+ |++++|||||||||||+.+
T Consensus 213 ~LGl~~~~~~~---~~~~rd~~~e~~~~l~~~a~~l~kia~Dl~l~s---~~e~gei~e~~~~~~~GSSiMP~K~NP~~~ 286 (449)
T PRK08540 213 ILGLKPVLISN---QVIQRDRHAEFMMFLANIATTLDKIGLEIRNLQ---RTEIGEVEEEFGKKQVGSSTMPHKRNPITS 286 (449)
T ss_pred HcCCCCCCCcC---CccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhhhhhhcccCCCCCCcCCCCCCcCcHHH
Confidence 99999865554 379999999999999999999999999999999 679999986 4679999999999999999
Q ss_pred HHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh------
Q 011379 364 EALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE------ 437 (487)
Q Consensus 364 E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~------ 437 (487)
|.++++|+++.|....+. .....+++++...|...|.+++.+..+.+++..++..|+++|+||++||++|++.
T Consensus 287 E~i~~~a~~~~g~~~~~~-~~~~~~~~rd~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ 365 (449)
T PRK08540 287 EQICGLARVVRSNVEPAL-LNNPLWDERDLTNSSCERIIFPESCVLTDHILKLMIKVLEGLRFNPENIRRNLELTKGLIM 365 (449)
T ss_pred HHHHHHHHHHHHHHHHHH-hcchhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcCHHH
Confidence 999999999999976544 3444467777778888899999999999999999999999999999999999873
Q ss_pred -----------hhcHHHHHH----HHHHHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 438 -----------KIGYDNAAA----VAKKAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 -----------~ig~~~A~~----ia~~a~~~g~~~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
.+||+.||+ +++.+.++|++|+|.+.+. +.+++++|++++||++|+|+
T Consensus 366 ae~la~~L~~~glg~~~Ah~~v~~l~~~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~~~g~ 432 (449)
T PRK08540 366 AEAVMIELAKRGMGRQEAHELVRQAAMKAHEEGRHLKEVLLEDEEVMKYLTEEELEELLDPETYIGT 432 (449)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhccCCHHHHHHHcCHHHhcCc
Confidence 479999965 4555777899999988876 67899999999999999996
No 22
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=1.3e-74 Score=613.63 Aligned_cols=395 Identities=22% Similarity=0.277 Sum_probs=335.2
Q ss_pred CccCh----HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccc
Q 011379 53 KLWGA----QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVV 127 (487)
Q Consensus 53 ~~~g~----~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~ 127 (487)
++||+ .+.+.+..|..|- .+|..+++.-+.+.+|+++++.+.| ||++++++|.++|+++.++...+.|++++
T Consensus 17 ~~w~~r~~~~~~~~~~~~~~s~---~~d~~l~~~di~~~~Aha~~L~~~Gii~~~~a~~I~~al~~i~~~~~~~~f~~~~ 93 (474)
T PLN02646 17 KLWGGRFEEGVTPAVEKFNESI---SFDKRLYKEDIMGSKAHASMLAKQGIITDEDRDSILDGLDEIEKEIEAGKFEWRP 93 (474)
T ss_pred hhhcCCCCCCccHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCCcCCC
Confidence 46765 4555677775432 3577888888889999999999999 99999999999999998877778888543
Q ss_pred cccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 128 WQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSK 207 (487)
Q Consensus 128 ~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~ 207 (487)
+ .+++||| ||+++++++| +.|+| +| +||||||+++|+++|++++. +..|.+.|..|+++|.++
T Consensus 94 ---~-~ed~h~~----iE~~L~e~~G-~~g~~-lH------~grSrND~v~Ta~~L~lr~~-l~~l~~~L~~L~~~L~~~ 156 (474)
T PLN02646 94 ---D-REDVHMN----NEARLTELIG-EPAKK-LH------TARSRNDQVATDTRLWCRDA-IDVIRKRIKTLQVALVEL 156 (474)
T ss_pred ---C-CCchHHH----HHHHHHHHhc-hhhCc-cc------CCCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 3 3777887 5788999998 67888 88 59999999999999998876 469999999999999999
Q ss_pred HHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHHH
Q 011379 208 SVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEE 286 (487)
Q Consensus 208 A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~ 286 (487)
|++|+|++||||||+||||||||||||++|+++|.|+++||.+++++++.+||||||+ ||++++++ +++|++
T Consensus 157 A~~~~dtvmpGrTHlQ~AqPiT~G~~l~~~~~~l~rd~~RL~~~~~r~~~~pLGgga~aGt~~~idr-------~~~A~~ 229 (474)
T PLN02646 157 AEKNVDLVVPGYTHLQRAQPVLLSHWLLSHVEQLERDAGRLVDCRPRVNFCPLGSCALAGTGLPIDR-------FMTAKD 229 (474)
T ss_pred HHHcCCCEEecccCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhcCCCCCCCH-------HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998 99998887 579999
Q ss_pred cCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhHH
Q 011379 287 TSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEA 365 (487)
Q Consensus 287 LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E~ 365 (487)
|||.. +..|.+||+++||++++++++++.++.+|+|||+||++|+|+ |||||.+|+. ++|||||||||||+.+|.
T Consensus 230 LGf~~-~~~n~~da~~~RD~~~e~~~~la~ia~~LsRia~Dl~l~ss~---e~g~v~~~d~~~~GSSiMPqKrNP~~~E~ 305 (474)
T PLN02646 230 LGFTA-PMRNSIDAVSDRDFVLEFLFANSITAIHLSRLGEEWVLWASE---EFGFVTPSDAVSTGSSIMPQKKNPDPMEL 305 (474)
T ss_pred hCCCC-CCCChHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCeeeeCCCCCCCcCCCCCCCCCHHHHH
Confidence 99976 788999999999999999999999999999999999999975 6999999874 899999999999999999
Q ss_pred HHHHHHHhhcchHHHHHhcccc--chhhhhhhhhHHH-hHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhcHH
Q 011379 366 LTMVCAQVIGNHVAITVGGSNG--HFELNVFKPMIAS-GLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIGYD 442 (487)
Q Consensus 366 i~~~a~~v~G~~~~~~~~~~~~--~~e~~~~~~~~~~-~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig~~ 442 (487)
++++|+++.|+..++.....+- .++++.. ..| .+++++..+..++..+. .|+++|+||++||+++++. |+.
T Consensus 306 ir~~a~~v~G~~~~~~~~~~~~p~~~~rD~q---~~~~~l~~~~~~~~~~l~~~~-~~l~~l~v~~~rm~~~l~~--~~~ 379 (474)
T PLN02646 306 VRGKSARVIGDLVTVLALCKGLPTAYNRDLQ---EDKEPLFDSVDTVSDMLEVAT-EFAQNITFNPERIKKSLPA--GML 379 (474)
T ss_pred HHHHHHHHHhhhHHHHHHhcCCchHhhcchh---hHHHHHHHHHHHHHHHHHHHH-HHHccCEECHHHHHHHHHc--Ccc
Confidence 9999999999999887544322 3333321 112 36788888888888874 6999999999999999987 666
Q ss_pred HHHHHHHHHHHcCCCHHHHHHH---------------------c----CCCCHHHHhhccCcccccC
Q 011379 443 NAAAVAKKAHKEGTTLKDAALK---------------------L----GVLNSEEFDNLVVPEKMIG 484 (487)
Q Consensus 443 ~A~~ia~~a~~~g~~~re~~~~---------------------~----~~l~~eel~~~ldP~~~~g 484 (487)
.|++++.+++++|++||+|+.. . ....++++.+++||+.++.
T Consensus 380 ~At~la~~Lv~~Gi~fr~Ah~iV~~~v~~a~~~g~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~ 446 (474)
T PLN02646 380 DATTLADYLVRKGVPFRETHHIVGAAVALAESKGCELSDLTLEDLKSINPVFEEDVYEVLGVENSVE 446 (474)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccchHHHHHhCCHHHHHH
Confidence 6666666666666666666542 1 1234667888999998875
No 23
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.9e-74 Score=606.99 Aligned_cols=393 Identities=19% Similarity=0.241 Sum_probs=332.2
Q ss_pred CccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccC
Q 011379 53 KLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 131 (487)
Q Consensus 53 ~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~~ 131 (487)
.+|+.+.++++ |+ +++++++|++||.|+|+|++++| ||++.+++|.+++... .+++..+...
T Consensus 3 ~~y~~~~~~~i--~s--------~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~~~-------~~d~~~~~~~ 65 (435)
T PRK07492 3 PRYSRPEMVAI--WE--------PETKFRIWFEIEAHACEAQAELGVIPKEAAETIWEKGKDA-------EFDVARIDEI 65 (435)
T ss_pred cccCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCccc-------CCCHHHHHHH
Confidence 58999999999 74 78999999999999999999999 9999999998876320 0111111000
Q ss_pred cccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 011379 132 SGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEF 211 (487)
Q Consensus 132 ~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~ 211 (487)
.. ..+..+- .+++.+.+.+| +.|+| || +|+|||||+||+++|++++. +..+.+.|..++++|.++|++|
T Consensus 66 ~~-~~~h~v~-a~~~~L~~~~g-~~~~~-vH------~G~Ts~Di~dTa~~L~lr~~-~~~l~~~l~~l~~~L~~~A~~~ 134 (435)
T PRK07492 66 EA-VTKHDVI-AFLTHLAEFVG-PDARF-VH------QGMTSSDVLDTCLNVQLVRA-ADLLLADLDRVLAALKKRAFEH 134 (435)
T ss_pred HH-HhCCChH-HHHHHHHHHhh-Hhhhh-hc------CCCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHc
Confidence 00 0011111 23466788888 45778 88 59999999999999998655 6799999999999999999999
Q ss_pred ccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCCCC
Q 011379 212 KDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPF 291 (487)
Q Consensus 212 ~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~ 291 (487)
+||+||||||+|||+|||||+||++|+++|.|+++||.+++++++.+|||| |+||+++++ +.+.++++++|||+.
T Consensus 135 ~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgG-AvGT~~~~~----~~~~~~~a~~LGl~~ 209 (435)
T PRK07492 135 KDTPTIGRSHGIHAEPTTFGLKLARFYAEFARNRERLVAAREEIATCAISG-AVGTFANID----PRVEEHVAKKLGLKP 209 (435)
T ss_pred CCCEEeeccCCccceehhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcc-cccCCccCC----hHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999999999988 899988876 367889999999998
Q ss_pred ccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcC--CCCCCCCCCCCCCChhhhHHHHHH
Q 011379 292 VTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMV 369 (487)
Q Consensus 292 ~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp--~~~~GSSiMP~K~NP~~~E~i~~~ 369 (487)
++.+| ++++||++++++++|+.++++|+|||+||++|+ ++||+|+.+| ++++|||||||||||+.+|.++++
T Consensus 210 ~~~~~---~v~~RD~~~e~~~~la~~~~~L~ria~Di~~l~---~~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~i~~~ 283 (435)
T PRK07492 210 EPVST---QVIPRDRHAMFFATLGVIASSIERLAIEIRHLQ---RTEVLEAEEFFSPGQKGSSAMPHKRNPVLTENLTGL 283 (435)
T ss_pred CCccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchhccccCCCCCCCCCCCCCCCcHHHHHHHHH
Confidence 55543 268999999999999999999999999999999 6799999976 468999999999999999999999
Q ss_pred HHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh------------
Q 011379 370 CAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE------------ 437 (487)
Q Consensus 370 a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~------------ 437 (487)
++.+.|+..++. .....++|++...|...|.+++.+..+...+...+..++++|+||++||++|++.
T Consensus 284 a~~~~~~~~~~~-~~~~~~~eRD~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~i~ae~~~~ 362 (435)
T PRK07492 284 ARLVRSYVVPAM-ENVALWHERDISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPENMLKNLNKFGGLVHSQRVLL 362 (435)
T ss_pred HHHHHHHHHHHH-HhcchhhccCChHHHHhhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhcCChhHHHHHHH
Confidence 999999965544 3556678888877888888888888888777777789999999999999999984
Q ss_pred -----hhcHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 438 -----KIGYDNAAAVAK----KAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 -----~ig~~~A~~ia~----~a~~~g~~~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
.+||+.||+++. ++.++|.+|+|.+.++ +.++++||+++|||++|+|.
T Consensus 363 ~L~~~g~~r~~Ah~~V~~~~~~a~~~~~~l~e~l~~~~~~~~~l~~~el~~~~dp~~ylg~ 423 (435)
T PRK07492 363 ALTQAGVSREDAYRLVQRNAMKVWEQGGDFLEELKADPEVRAALSEEEIEELFDLGYHTKH 423 (435)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHhCCHHhHhcCCHHHHHHHhCHHHHhcc
Confidence 378888876544 4566789999988865 48899999999999999996
No 24
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.3e-73 Score=602.66 Aligned_cols=388 Identities=19% Similarity=0.229 Sum_probs=331.7
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH-HHHccccCCCCcccccccC
Q 011379 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ-EVAEGKLNDHFPLVVWQTG 131 (487)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~-~v~~~~~~~~f~~~~~~~~ 131 (487)
+|+.+.++.+ |+ +++++++|++||.|++.+++++| ||++++++|.++++ ++.. +......
T Consensus 4 ~y~~~~~~~i--~s--------~~~~~~~~l~ve~A~a~al~~~G~Ip~~~a~~I~~~~~~d~~~--------~~~~~~~ 65 (442)
T PRK08470 4 RYAREEMKKK--WT--------MQAKYDAWLEVEKAAVKAWNKLGLIPDSDCEKICKNAKFDIAR--------IDEIEKT 65 (442)
T ss_pred ccCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccchHH--------HHHHHHc
Confidence 8999999999 73 78999999999999999999999 99999999998873 1110 0000001
Q ss_pred cccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 011379 132 SGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEF 211 (487)
Q Consensus 132 ~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~ 211 (487)
.+. .+.. +...+.+.+| +.|+| || +|+|||||+||+++|++++. +..+.+.|..|+++|.++|++|
T Consensus 66 ~~~----dv~~-~v~~L~e~~g-~~~~~-vH------~G~TsnDi~dTa~~L~lr~~-l~~l~~~l~~l~~~L~~lA~~~ 131 (442)
T PRK08470 66 TKH----DLIA-FLTSVSESLG-EESRF-VH------YGMTSSDCIDTAVALQMRDS-LKLIIEDVKNLMEAIKKRALEH 131 (442)
T ss_pred cCC----ChHH-HHHHHHHHcc-ccccc-ee------cCCChhchHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 111 1222 2355678887 45777 88 59999999999999998765 5799999999999999999999
Q ss_pred ccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCCCC
Q 011379 212 KDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPF 291 (487)
Q Consensus 212 ~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~ 291 (487)
+||+||||||+|||+|||||||+++|+++|.|+++||.+++++++.+|||| |+||+.+.+ ..+.+++++.|||+.
T Consensus 132 ~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~lgG-AvGt~a~~~----~~v~~~~a~~LGl~~ 206 (442)
T PRK08470 132 KDTLMVGRSHGIHGEPITFGLVLAIWYDEIKRHLKALEHTMEVISVGKISG-AMGNFAHAP----LELEELVCEELGLKP 206 (442)
T ss_pred CCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc-hhcccccCC----hHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999987 999987654 467799999999998
Q ss_pred ccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcC--CCCCCCCCCCCCCChhhhHHHHHH
Q 011379 292 VTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMV 369 (487)
Q Consensus 292 ~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp--~~~~GSSiMP~K~NP~~~E~i~~~ 369 (487)
++++|+ +++||+++|++++|+.++++|+|||+||++|+ ++||+|+.+| ++++|||||||||||+.+|.++++
T Consensus 207 ~~~~~~---v~~RD~~~e~~~~La~~a~~L~ria~Di~~l~---~~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~~~ 280 (442)
T PRK08470 207 APVSNQ---VIQRDRYARLASALALLASSCEKIAVAIRHLQ---RTEVYEAEEYFSKGQKGSSAMPHKRNPVLSENITGL 280 (442)
T ss_pred CCCCCC---ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccceecccCCCCCCCcCCCCCCcCcHHHHHHHHH
Confidence 778884 69999999999999999999999999999999 5799999987 468999999999999999999999
Q ss_pred HHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh------------
Q 011379 370 CAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE------------ 437 (487)
Q Consensus 370 a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~------------ 437 (487)
|+++.|+..++. .....++|++...|..+|..++.+..+...+...+..++++|+||++||++|++.
T Consensus 281 a~~~~~~~~~~~-~~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~nl~~~~g~~~ae~l~~ 359 (442)
T PRK08470 281 CRVIRSFATPAL-ENVALWHERDISHSSVERFILPDAFITTDFMLHRLNNVIENLVVYPENMMKNLNLTGGLVFSQRVLL 359 (442)
T ss_pred HHHHHHHHHHHH-HhchHhhccCCchhHHHhhhHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccChHHHHHHHH
Confidence 999999975544 3556678988887888888888888888877777789999999999999999965
Q ss_pred -----hhcHHHHHHHHH----HHHHc---CCC---------HHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 438 -----KIGYDNAAAVAK----KAHKE---GTT---------LKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 -----~ig~~~A~~ia~----~a~~~---g~~---------~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
.+||+.||+++. ++.++ |.+ |+|.+..+ +.+++++|+++|||+.|+|.
T Consensus 360 ~L~~~G~~~~~Ah~~V~~~~~~a~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~dp~~~~g~ 432 (442)
T PRK08470 360 ELPKKGVSREDAYKIVQRNAMKVWEDLQQGKAAINEKGESLFLQALLNDEDLRKSLSEEEIRACFDYSYYTKN 432 (442)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHhhcCCCccccccHHHHHHHHhcCHHhHhcCCHHHHHHHhCHHHHHhh
Confidence 367888886654 44566 888 99988764 48899999999999999995
No 25
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=4.2e-73 Score=596.24 Aligned_cols=385 Identities=19% Similarity=0.241 Sum_probs=331.3
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH----HHHccccCCCCccccc
Q 011379 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ----EVAEGKLNDHFPLVVW 128 (487)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~----~v~~~~~~~~f~~~~~ 128 (487)
+|+.+.++++ |+ +++++++|++||.|++++++++| ||++.+++|.++++ ++.+......+|+.+
T Consensus 4 ~y~~~~~~~~--fs--------~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~~d~~~i~~~~~~~~h~v~a- 72 (431)
T PRK07380 4 RYTLPEMGNI--WT--------DTAKFQTWLDVEIAVCEAQAELGKIPQEAVEEIKAKANFDPQRILEIEAEVRHDVIA- 72 (431)
T ss_pred ccCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccCCCHHHHHHHHHHhCCChHH-
Confidence 8999999999 74 78999999999999999999999 99999999987641 122211111222222
Q ss_pred ccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 129 QTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKS 208 (487)
Q Consensus 129 ~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A 208 (487)
+-+.+.+.+| +.|+| || +|+|||||+||+++|++++. +..+.+.|..++++|.++|
T Consensus 73 ---------------~v~~l~~~~g-~~~~~-vH------~G~Ts~Di~dTa~~L~lr~~-l~~l~~~l~~l~~~L~~lA 128 (431)
T PRK07380 73 ---------------FLTNVNEYVG-DAGRY-IH------LGMTSSDVLDTGLALQLVAS-LDLLLEELEDLIQAIRYQA 128 (431)
T ss_pred ---------------HHHHHHHHHH-Hhhcc-cc------CCCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 1234677787 67888 88 59999999999999998765 5799999999999999999
Q ss_pred HHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcC
Q 011379 209 VEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETS 288 (487)
Q Consensus 209 ~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LG 288 (487)
++|+||+|+||||+|||+||||||||++|+++|.|+++||.+++++++.+|||| |+||++++++ ++.+.+++.||
T Consensus 129 ~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~l~G-AvGt~~~~~~----~~~~~~a~~LG 203 (431)
T PRK07380 129 REHRNTVMIGRSHGIHAEPITFGFKLAGWLAETLRNRERLVRLREDIAVGQISG-AVGTYANTDP----RVEAITCQKLG 203 (431)
T ss_pred HHcCCCeeechhcCccceechHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcch-hhcCcccCCh----hHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999976 8999888764 56778999999
Q ss_pred CCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcC--CCCCCCCCCCCCCChhhhHHH
Q 011379 289 LPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEAL 366 (487)
Q Consensus 289 l~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp--~~~~GSSiMP~K~NP~~~E~i 366 (487)
|+.++.+| ++++||++++++++|+.++++|+|||+||++|+ ++|++|+.+| .+++|||||||||||+.+|.+
T Consensus 204 l~~~~~~~---~v~~rd~~~e~~~~la~~a~~L~kia~Di~~l~---~~~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i 277 (431)
T PRK07380 204 LKPDTAST---QVISRDRHAEYVQTLALVGASLERFATEIRNLQ---RTDVLEVEEYFAKGQKGSSAMPHKRNPIRSERL 277 (431)
T ss_pred CCCCCCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCceeecccCCCCCCCCcCCCCCCCCHHHHHH
Confidence 99865554 468999999999999999999999999999999 6799999866 468999999999999999999
Q ss_pred HHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh---------
Q 011379 367 TMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE--------- 437 (487)
Q Consensus 367 ~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~--------- 437 (487)
+++|+.+.|+..++. .....++|++...|...|..++.+..+...+...+..++++|+||+++|++|++.
T Consensus 278 ~~~a~~~~g~~~~~~-~~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~~~ae~ 356 (431)
T PRK07380 278 SGLARVLRSYAVAAL-ENVALWHERDISHSSVERVMLPDCSILLHFMLREMTDLVKNLLVYPENMRRNMNIYGGVVFSQR 356 (431)
T ss_pred HHHHHHHHHHHHHHH-HhchhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCChHHHHH
Confidence 999999999987654 3455678888877888888999988877777777789999999999999999973
Q ss_pred --------hhcHHHHHHHHH----HHHH-cCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 438 --------KIGYDNAAAVAK----KAHK-EGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 --------~ig~~~A~~ia~----~a~~-~g~~~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
.+|++.||+++. ++.+ +|.+|+|.+.++ +.++++||++++||++|+|.
T Consensus 357 ~~~~Lv~~gl~r~~Ah~~V~~~~~~a~~~~~~~l~e~l~~~~~~~~~l~~~~l~~~~dp~~ylg~ 421 (431)
T PRK07380 357 VLLALVEKGMSREEAYRLVQKNAHTAWNTEGGNFRANLEADPEVTQLLSAAELADCFDPQLHLKN 421 (431)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCHHHHHHcChHhhhcCCHHHHHHhhCHHHHhcc
Confidence 378888886544 5567 899999998875 48899999999999999996
No 26
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=5.6e-73 Score=585.33 Aligned_cols=391 Identities=26% Similarity=0.341 Sum_probs=346.2
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH-------HHHccccCCCC
Q 011379 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ-------EVAEGKLNDHF 123 (487)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~-------~v~~~~~~~~f 123 (487)
+.+|+.++|+++ |+ +++++++|++||.|+++|++++| ||+++++.|.+++. .+.+......+
T Consensus 2 ~~RY~~~em~~i--fS--------~~~~~~~~l~vE~ala~A~aelG~Ip~~a~~~I~~~~~~~~~d~~~i~eie~~t~H 71 (438)
T COG0015 2 DGRYSSPEMRAI--FS--------EEAKLRAWLKVEAALARAQAELGVIPAEAAAEIDAAAAFAEFDLERIKEIEAETGH 71 (438)
T ss_pred CcccCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhcccccCHHHHHHHHHHhCC
Confidence 468999999999 84 78999999999999999999999 99999999998863 33332222223
Q ss_pred cccccccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 124 PLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNS 203 (487)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~ 203 (487)
++.+ +...+.+.||++.++| || +|.|||||+||+..|.++ ++.+.|.+.|..+++.
T Consensus 72 dV~a----------------~v~~l~e~~~~~~~~~-VH------~GaTS~DI~Dta~~L~lk-~a~~ii~~~l~~l~~~ 127 (438)
T COG0015 72 DVKA----------------LVRALAEKVGEEASEY-VH------FGATSQDIIDTALALQLK-EALDLILPDLKRLIEA 127 (438)
T ss_pred CcHH----------------HHHHHHHhcCcccccc-ee------cccchHHHHhHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 3322 2345678888666667 77 699999999999998875 5578999999999999
Q ss_pred HHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHH
Q 011379 204 LHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAV 283 (487)
Q Consensus 204 L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~l 283 (487)
|.++|.+|+|++|+||||+|||+|||||++++.|++++.|+++||.++.+++..+++|| |+||..+.++ .+..+++++
T Consensus 128 L~~~A~~~k~t~m~GRTHgq~A~PtT~G~k~A~w~~el~R~~~rL~~~~~~~~~g~i~G-a~Gt~Aa~~~-~~~~ve~~v 205 (438)
T COG0015 128 LAELALEHKDTPMLGRTHGQPAEPTTFGKKFANWLAELLRHLERLEEAEERIIVGKIGG-AVGTLAALGD-LGAEVEERV 205 (438)
T ss_pred HHHHHHHhCCCeecccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc-chhhHhhcCc-hhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 9999776654 467899999
Q ss_pred HHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCC--CCCCCCCCCCCCChh
Q 011379 284 AEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPT 361 (487)
Q Consensus 284 a~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~--~~~GSSiMP~K~NP~ 361 (487)
++.|||+..+.++ |+.+||+++++.++|+.++++|.|||.||++|+ |+|++||.+|. +|+|||+|||||||+
T Consensus 206 ~e~LGL~~~p~st---q~~~RD~~ae~~~~La~i~~sl~k~a~dIr~l~---~~e~~Ev~E~f~~gq~GSSaMPHKrNPi 279 (438)
T COG0015 206 AEKLGLKPAPIST---QVSPRDRIAEFFSALALLAGSLEKFARDIRLLQ---RTEVGEVEEPFAKGQVGSSAMPHKRNPI 279 (438)
T ss_pred HHHcCCCCCCCCc---ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccccccccccCCCCCCCCCCCcccCcH
Confidence 9999999877776 589999999999999999999999999999999 78999999984 699999999999999
Q ss_pred hhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh----
Q 011379 362 QCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE---- 437 (487)
Q Consensus 362 ~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~---- 437 (487)
.||.+.++++.+.++........ ..|+|++...|.+.|..+|..+.+.+.++..+.+++++|+||+++|++||+.
T Consensus 280 ~~E~~~glar~~r~~~~~~~e~~-~~whERdlt~ssver~~Lp~~~~~~~~aL~~~~~vl~~L~v~~~~m~~nL~~~~gl 358 (438)
T COG0015 280 DSENVTGLARVARALVSTLLENL-VLWHERDLTDSSVERVILPDAFIAADGALNRLLNVLEGLEVNPERMRRNLDLTLGL 358 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHhhccch
Confidence 99999999999999987776655 8899999999999999999999999999998899999999999999999988
Q ss_pred -------------hhcHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 438 -------------KIGYDNAAAVAK----KAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 -------------~ig~~~A~~ia~----~a~~~g~~~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
.+||++|+++++ .+.+++++|++....+ +++++++++++|||.+|+|.
T Consensus 359 i~se~v~~~l~~~g~~Re~a~elvr~~a~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~dp~~y~G~ 427 (438)
T COG0015 359 IASERVMLALRKKGMGREEAHELVREKAMKAWEQGKEFLELLLADERVTKYLSEEELLELLDPANYLGR 427 (438)
T ss_pred hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccchHHHhccchhhhccCcHHHHHHcCCHHHHhhH
Confidence 568999987655 4667899998877764 58999999999999999985
No 27
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=4.1e-73 Score=600.12 Aligned_cols=378 Identities=22% Similarity=0.274 Sum_probs=322.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 011379 75 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 153 (487)
Q Consensus 75 ~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg 153 (487)
.+++++++|+.|++|+|.++.+.| ||++++++|.++|+++.++...+.|+.++ .+++.++++++ .+++++|
T Consensus 4 ~d~~~~~~~~~ve~A~a~al~~~Gii~~~~a~~I~~al~~~~~~~~~~~~~~~~----~~~~~~~~~e~----~l~~~~g 75 (435)
T cd01359 4 FDRRLFEEDIAGSIAHAVMLAEQGILTEEEAAKILAGLAKIRAEIEAGAFELDP----EDEDIHMAIER----RLIERIG 75 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCccCCC----CCCcHHHHHHH----HHHHHHH
Confidence 468999999999999999999999 99999999999999987654456777765 35667777654 4567777
Q ss_pred ccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhh
Q 011379 154 HKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQE 233 (487)
Q Consensus 154 ~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~ 233 (487)
+.|+| || +|+||||+++|+++|++++. +..+.+.|..|+++|.++|++|+||+||||||+|||||||||||
T Consensus 76 -~~~~~-iH------~G~SsnDi~~Ta~~L~lr~~-l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~ 146 (435)
T cd01359 76 -DVGGK-LH------TGRSRNDQVATDLRLYLRDA-LLELLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFGHY 146 (435)
T ss_pred -HHHhh-hh------ccCCHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCEecCCCCCccceeccHHHH
Confidence 67777 88 59999999999999998766 57999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHH
Q 011379 234 FSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 312 (487)
Q Consensus 234 ~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~ 312 (487)
|++|+++|.|+++||.+++++++.+||||++. ||++++++ ++++++|||+. +..|.++++++||+++++++
T Consensus 147 ~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaag~gt~~~~~~-------~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~~ 218 (435)
T cd01359 147 LLAYAEMLERDLERLADAYKRVNVSPLGAGALAGTTFPIDR-------ERTAELLGFDG-PTENSLDAVSDRDFVLEFLS 218 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHcCCCC-CccCHHHHHhcchHHHHHHH
Confidence 99999999999999999999999999999665 77777665 67999999996 67888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhccc----c
Q 011379 313 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN----G 387 (487)
Q Consensus 313 ~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~----~ 387 (487)
+|+.++++|+|||+||++|+|+ |||||.+|+. .+|||||||||||+.+|.++++|+++.|+..++.....+ .
T Consensus 219 ~l~~~a~~l~ria~Dl~l~~~~---e~gev~lpe~~~~GSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~ 295 (435)
T cd01359 219 AAALLMVHLSRLAEDLILWSTQ---EFGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPLAY 295 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC---CCCeeeCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhhHHhHHHHHhcCCCCcc
Confidence 9999999999999999999964 6999999987 599999999999999999999999999999888765432 2
Q ss_pred chhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh----------------hhcHHHHHH----H
Q 011379 388 HFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE----------------KIGYDNAAA----V 447 (487)
Q Consensus 388 ~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~----------------~ig~~~A~~----i 447 (487)
+.+.+... .++++++..+..++..+. .++++|+||+++|++|++. .+||+.||+ +
T Consensus 296 ~~d~~~~~----~~l~~~~~~~~~al~~~~-~~l~~l~v~~~~m~~~l~~~~~~a~~l~~~l~~~~g~~~r~Ah~~v~~~ 370 (435)
T cd01359 296 NKDLQEDK----EPLFDAVDTLIASLRLLT-GVISTLTVNPERMREAAEAGFSTATDLADYLVREKGVPFREAHHIVGRA 370 (435)
T ss_pred chhHHHhh----HHHHHHHHHHHHHHHHHH-HHHhhCEECHHHHHHHHhcCccHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 33333322 246777777888888875 6999999999999999865 255666654 4
Q ss_pred HHHHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 448 AKKAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 448 a~~a~~~g~~~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
++++.++|++++|.+.+. +.++++++++++||++|+|.
T Consensus 371 ~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~~~~ 412 (435)
T cd01359 371 VRLAEEKGKDLSDLTLAELQAISPLFEEDVREALDPENSVER 412 (435)
T ss_pred HHHHHHcCCChhhcCHHHHHhhcccCHHHHHHhCCHHHHHHh
Confidence 445566777877776554 67899999999999999964
No 28
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=7.5e-73 Score=599.12 Aligned_cols=402 Identities=22% Similarity=0.279 Sum_probs=337.9
Q ss_pred ccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcc
Q 011379 47 ILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPL 125 (487)
Q Consensus 47 ~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~ 125 (487)
+..|.+.+||...++.+ |+ +++++++|++|+.|+++++.++| ||++++++|.++++..... ... +
T Consensus 2 ~~~~~~~~y~~~~~~~i--~s--------~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~~~~d-~~~---~ 67 (451)
T PRK06390 2 VVSPIEYRYGRDQVKYI--FD--------DENRLRYMLKVEAAIAKAEYEYGIIPRDAFLDIKNAVDSNSVR-LER---V 67 (451)
T ss_pred CCCCcCcccCCHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCC-HHH---H
Confidence 45788999999999999 74 78999999999999999999999 9999999999988653110 000 0
Q ss_pred cccccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 126 VVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLH 205 (487)
Q Consensus 126 ~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~ 205 (487)
.......+.+ + ..+++.+.+.+| +.|+| +| +|+||||+++|+++|++++. +..+.+.|..|+++|.
T Consensus 68 ~~~~~~~~~d----v-~~~~~~L~~~~g-~~~~~-iH------~G~SsnDi~~Ta~~L~lr~~-l~~l~~~l~~l~~~L~ 133 (451)
T PRK06390 68 REIESEIKHD----V-MALVEALSEQCS-AGKNY-VH------FGVTSNDINDTATALQIHDF-VSIIKDDIKNLMETLI 133 (451)
T ss_pred HHHHHHhCCC----c-HHHHHHHHHHhh-hhhhh-ee------cCccHhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 0000111222 2 235677888888 77888 88 59999999999999998765 5799999999999999
Q ss_pred HHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHH
Q 011379 206 SKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAE 285 (487)
Q Consensus 206 ~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~ 285 (487)
++|++|+||+||||||+||||||||||||++|+++|.|+++||.+++++++.+++|| |+||+...+.+ +..+.+++++
T Consensus 134 ~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~r~~~~~~~g-avGt~a~~g~~-~~~~~~~~a~ 211 (451)
T PRK06390 134 KLIDEYKDSPMMGRTHGQHASPITFGLKFAVYLDEMSRHLDRLTEMGDRAFAGKVLG-PVGTGAALGKD-ALDIQNRVME 211 (451)
T ss_pred HHHHHhCCCchhhhhCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC-hhcChhhCCCc-HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 99998877655 5678899999
Q ss_pred HcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEE--c-CCCCCCCCCCCCCCChhh
Q 011379 286 ETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELI--L-PENEPGSSIMPGKVNPTQ 362 (487)
Q Consensus 286 ~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~--l-p~~~~GSSiMP~K~NP~~ 362 (487)
+|||+.+.. .+++++||++++++++++.++++|+|||+||++|+|+ |+|||. + |++++|||||||||||+.
T Consensus 212 ~LGl~~~~~---~~~~~~rD~~~e~~~~l~~la~~l~kia~Di~l~ss~---e~g~v~E~~~~~~~~GSSiMP~KrNPv~ 285 (451)
T PRK06390 212 ILGIYSEIG---STQIVNRDRYIEYLSVINGISVTLEKIATEIRNLQRP---EIDEVSEYFDEESQVGSSSMPSKVNPIN 285 (451)
T ss_pred HcCCCCCCC---ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccchhhcccccCCCCCccCCCCCCCcHH
Confidence 999998533 3367999999999999999999999999999999975 577775 3 447999999999999999
Q ss_pred hHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh-----
Q 011379 363 CEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE----- 437 (487)
Q Consensus 363 ~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~----- 437 (487)
+|.++++|..+.+... ........+++++...+...|+.++.+..+.+.+...+..|+++|+||++||++|++.
T Consensus 286 ~E~i~~~a~~~~~l~~-~~~~~~~~~~erd~~~~~~e~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~ 364 (451)
T PRK06390 286 SENVVSLSRFIRSLII-PEYEAGVTWHERDLTNSALERFTIPYASILIDYVLYNMNDVLSHLIIKEDEIRRNLESDDSIM 364 (451)
T ss_pred HHHHHHHHHHHHHhHH-HHHHhhhHhhccCCcchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHhccchhh
Confidence 9999999977776654 4444555568887777878888888888778888888889999999999999999885
Q ss_pred -----------hhcHHHHHHHHH----HHHHcCCCHHHHHHHcC---CCCHHHHhhccCcccccCC
Q 011379 438 -----------KIGYDNAAAVAK----KAHKEGTTLKDAALKLG---VLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 -----------~ig~~~A~~ia~----~a~~~g~~~re~~~~~~---~l~~eel~~~ldP~~~~g~ 485 (487)
.+||+.||+++. ++..+|+++++++.+.+ .+++++|++++||++|+|+
T Consensus 365 se~la~~L~~~G~~~~~Ah~~v~~~~~~a~~~g~~l~~~~~~~~~~~~l~~~~l~~~ldP~~~i~~ 430 (451)
T PRK06390 365 SESIVRALTLSGMPRQDAHEFVRRASMEARSNGKSLKSSLIEAGILKYIDEKTLDRAMDPANFIGQ 430 (451)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhcCCHHHHHHhcCHHHHhhh
Confidence 367777775444 45667899999887753 5899999999999999985
No 29
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.4e-72 Score=593.88 Aligned_cols=391 Identities=20% Similarity=0.283 Sum_probs=329.7
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHH---HH--HHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccc
Q 011379 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGI---LK--KCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVV 127 (487)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~---ve--~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~ 127 (487)
+|+.+....+..|+ +...++.++. |+ .|++.++++.| ||++++++|.++|+++.++.. .+|...
T Consensus 7 r~~~~~~~~~~~~~--------~~~~~d~~l~~~~i~~~~Aha~~l~e~Gii~~~~a~~I~~al~~i~~~~~--~~~~~~ 76 (455)
T PRK04833 7 RFTQAADQRFKQFN--------DSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQQQLEEALNELLEEVR--ANPQQI 76 (455)
T ss_pred ccCCcchHHHHHHh--------ccHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhh--cCCccc
Confidence 56555333344473 4466777877 88 99999999999 999999999999999864321 122223
Q ss_pred cccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 128 WQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSK 207 (487)
Q Consensus 128 ~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~ 207 (487)
+..+. + .+|++|++++.+++| +.|+| +| +|+||||+++|+++|++++.+ ..+.+.|..|+++|.++
T Consensus 77 ~~~~~-e----dv~~~ie~~L~~~~g-~~g~~-lH------~grSrnD~~~Ta~rl~~r~~l-~~l~~~l~~l~~~L~~~ 142 (455)
T PRK04833 77 LASDA-E----DIHSWVEGKLIDKVG-DLGKK-LH------TGRSRNDQVATDLKLWCKDQV-AELLTALRQLQSALVET 142 (455)
T ss_pred CCCCC-c----hHHHHHHHHHHHHhc-cccCc-cc------CCCCchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 32222 2 288889999999998 77888 88 599999999999999987765 69999999999999999
Q ss_pred HHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHHH
Q 011379 208 SVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEE 286 (487)
Q Consensus 208 A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~ 286 (487)
|++|+|++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||+|+ ||++++++ +++|++
T Consensus 143 A~~~~~tvm~GrTH~Q~AqP~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgaA~~GT~~~~dr-------~~~a~~ 215 (455)
T PRK04833 143 AENNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTAYEIDR-------EQLAGW 215 (455)
T ss_pred HHHcCCCEEeccccCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCCCH-------HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999887 99999885 689999
Q ss_pred cCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhHH
Q 011379 287 TSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEA 365 (487)
Q Consensus 287 LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E~ 365 (487)
|||+. +..|.+|++++||+++++++++++++++|+|||+||++|+|+ |||++++|+. ++|||||||||||+.+|.
T Consensus 216 LGf~~-~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~ss~---e~g~~el~~~~~~gSSiMPqKrNP~~~E~ 291 (455)
T PRK04833 216 LGFAS-ATRNSLDSVSDRDHVLELLSDASISMVHLSRFAEDLIFFNSG---EAGFVELSDRVTSGSSLMPQKKNPDALEL 291 (455)
T ss_pred hCCCC-CCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCceeeCCCCCCCcccCCCCCCChHHHH
Confidence 99998 588999999999999999999999999999999999999974 7998888875 799999999999999999
Q ss_pred HHHHHHHhhcchHHHHHhcccc--chhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhcHHH
Q 011379 366 LTMVCAQVIGNHVAITVGGSNG--HFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIGYDN 443 (487)
Q Consensus 366 i~~~a~~v~G~~~~~~~~~~~~--~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig~~~ 443 (487)
++++|+++.|+.+++.....+- .++++...+. ..+++++..+.+++.. +..|+++|+||+++|++++.. ||..
T Consensus 292 ir~~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~~--~~l~~~~~~~~~~l~~-~~~~l~~l~v~~~rm~~~~~~--g~~~ 366 (455)
T PRK04833 292 IRGKCGRVQGALTGMLMTLKGLPLAYNKDMQEDK--EGLFDALDTWLDCLHM-AALVLDGIQVKRPRCQEAAQQ--GYAN 366 (455)
T ss_pred HHHHHHHHHhhHHHHHHHHhCChHHHhhhhhhhH--HHHHHHHHHHHHHHHH-HHHHHhhCeECHHHHHHHHHc--cHHH
Confidence 9999999999998887543333 3444443332 3467777777775555 478999999999999999977 9999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHc----------C---------------CCCHHHHhhccCcccccC
Q 011379 444 AAAVAKKAHKEGTTLKDAALKL----------G---------------VLNSEEFDNLVVPEKMIG 484 (487)
Q Consensus 444 A~~ia~~a~~~g~~~re~~~~~----------~---------------~l~~eel~~~ldP~~~~g 484 (487)
|+++++.++++|++||+++... + .+.++++.+++||++++.
T Consensus 367 a~~~a~~L~~~g~~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~v~ 432 (455)
T PRK04833 367 ATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLAELQKFSSVIGDDVYPILSLQSCLD 432 (455)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhhcCHHHHHHhcccchHHHHHhCCHHHHHH
Confidence 9999999999999999987631 1 233566889999998874
No 30
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=9.7e-72 Score=595.45 Aligned_cols=380 Identities=17% Similarity=0.175 Sum_probs=311.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhC
Q 011379 75 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 153 (487)
Q Consensus 75 ~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg 153 (487)
.++.+++.|+++++|++.++.++| ||++++++|.++++++.+. ..+.|..+ ..+++ ++..|+.++.+..|
T Consensus 33 ~~~~~~~~~l~ve~Aha~~l~~~GiIp~e~a~~I~~al~~~~~~-~~~~l~~~----~~~ed----v~~~ie~~l~~~~G 103 (502)
T PRK06705 33 QRNYLLKDMFQVHKAHIVMLTEENLMKKEEAKFILHALKKVEEI-PEEQLLYT----EQHED----LFFLVEHLISQEAK 103 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhhc-ccCccccC----CCCCc----hHHHHHHHHHHhcC
Confidence 478999999999999999999999 9999999999999877431 12333322 23344 55557888888877
Q ss_pred ccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhh
Q 011379 154 HKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQE 233 (487)
Q Consensus 154 ~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~ 233 (487)
++.|+| +|+ |+||||+++|+++|++++.+ ..+.+.|..|+++|.++|++|+||+||||||+|||||||||||
T Consensus 104 ~~~g~~-lH~------GrSrnD~v~Ta~~L~lr~~l-~~l~~~l~~l~~~l~~~A~~~~~t~m~g~TH~Q~AqP~T~G~~ 175 (502)
T PRK06705 104 SDFVSN-MHI------GRSRNDMGVTMYRMSLRRYV-LRLMEHHLLLQESILQLAADHKETIMPAYTHTQPAQPTTFGHY 175 (502)
T ss_pred chhhcc-ccC------CCCHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCEEecccCCccceehHHHHH
Confidence 668888 995 99999999999999987764 6999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHH
Q 011379 234 FSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSG 312 (487)
Q Consensus 234 ~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~ 312 (487)
+++|+++|.|+++||.+++++++.+||||+|. ||+++ ..++++|++|||+. +..|++|++++||+++|+++
T Consensus 176 l~~~~~~l~r~~~rL~~~~~r~~~~plGgaag~gt~~~-------~~r~~~a~~LGf~~-~~~ns~~a~~~rD~~~e~~~ 247 (502)
T PRK06705 176 TLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFP-------IKRERVADLLGFTN-VIENSYDAVAGADYLLEVSS 247 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCCchhhhhccCCch-------HHHHHHHHHcCCCC-CcCCHHHHHhccHHHHHHHH
Confidence 99999999999999999999999999999554 44443 34589999999998 57899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhh
Q 011379 313 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFEL 391 (487)
Q Consensus 313 ~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~ 391 (487)
++++++++|+|||+||++|+| +|||.|++|+. .+|||||||||||+.+|.|+++|+++.|+.+++.. ...++++.
T Consensus 248 ~la~~~~~L~Ria~Dl~~~ss---~e~g~iel~e~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~l~-~~~~~~~~ 323 (502)
T PRK06705 248 LLMVMMTNTSRWIHDFLLLAT---KEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQ-MIHNTPFG 323 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHcC---CCCCeeeecCCCCCccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH-HhcCCcch
Confidence 999999999999999999996 47998888876 68999999999999999999999999999988765 44444433
Q ss_pred hh--hhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhcHHHHHHHHHHHHHc-CCCHHHHHH-----
Q 011379 392 NV--FKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIGYDNAAAVAKKAHKE-GTTLKDAAL----- 463 (487)
Q Consensus 392 ~~--~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig~~~A~~ia~~a~~~-g~~~re~~~----- 463 (487)
.. .++.+...++..+....+++..+ ..++++|+||++||++|+.. |+..|++++..++++ |++||+|+.
T Consensus 324 ~~~d~q~~~~~~~~~~~~~~~~~l~~~-~~~l~~l~v~~~rm~~~~~~--g~~~At~la~~Lv~~~Gl~fr~Ah~iV~~~ 400 (502)
T PRK06705 324 DIVDTEDDLQPYLYKGIEKAIRVFCIM-NAVIRTMKVEEDTLKRRSYK--HAITITDFADVLTKNYGIPFRHAHHAASVI 400 (502)
T ss_pred hhhhhHhhhhhHHHHHHHHHHHHHHHH-HHHHCcCEECHHHHHHHHhc--CchHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 22 22222233455555555555555 68999999999999999977 666666666665555 666666544
Q ss_pred ----------------Hc----------CCCCHHHHhhccCcccccCCC
Q 011379 464 ----------------KL----------GVLNSEEFDNLVVPEKMIGPS 486 (487)
Q Consensus 464 ----------------~~----------~~l~~eel~~~ldP~~~~g~~ 486 (487)
++ ..++++++++++||++|++.+
T Consensus 401 v~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r 449 (502)
T PRK06705 401 ANMSLEQKKELHELCFKDVNIYLQEKFKIQLLEKEWEEIISPEAFIQKR 449 (502)
T ss_pred HHHHHHhCCCHHHhhHHHHHhhhhhhhhhcCCHHHHHHHCCHHHHHhhc
Confidence 11 236788899999999999853
No 31
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=1.5e-71 Score=586.57 Aligned_cols=390 Identities=17% Similarity=0.166 Sum_probs=335.8
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHH-----HHccccCCCCc
Q 011379 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG--LDPAIGKAIMQAAQE-----VAEGKLNDHFP 124 (487)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G--i~~~~a~~I~~a~~~-----v~~~~~~~~f~ 124 (487)
|-+|+.+.++.+ |+ +++++++|+++|.|++.+++++| ||++.+++|.+++.+ |.+......++
T Consensus 2 ~~ry~~~~~~~~--fs--------~~~~~~~~l~~e~ala~a~~~~g~~ip~~~a~~i~~~~~~~d~~~i~~~e~~~~hd 71 (436)
T cd03302 2 ASRYASKEMVYI--FS--------PRKKFSTWRKLWLWLAEAEKELGLDISDEQIEEMKANVENIDFEIAAAEEKKLRHD 71 (436)
T ss_pred CCCcCCHHHHHH--cC--------hHHHHHHHHHHHHHHHHhhHHhCCCCCHHHHHHHHHhhhcCCHHHHHHHHHHhCcC
Confidence 458999999999 74 78999999999999999999999 799999999887621 11111111222
Q ss_pred ccccccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 125 LVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSL 204 (487)
Q Consensus 125 ~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L 204 (487)
+ ..+ ...+.+.+| +.|+| || +|+||||+++|++.|++++. +..+.+.|..|+++|
T Consensus 72 v---------------~a~-~~~l~~~~~-~~~~~-vH------~G~TS~Di~dta~~L~lr~a-~~~l~~~L~~l~~~L 126 (436)
T cd03302 72 V---------------MAH-VHAFGLLCP-AAAGI-IH------LGATSCFVTDNTDLIQIRDA-LDLILPKLAAVIDRL 126 (436)
T ss_pred c---------------hHH-HHHHHHHhH-hccCe-ee------eCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 2 222 244677787 67888 88 59999999999999887654 689999999999999
Q ss_pred HHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCC------CCCchHH
Q 011379 205 HSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNT------KKGFDVK 278 (487)
Q Consensus 205 ~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~------~~~~~~~ 278 (487)
.++|++|+||+||||||+|||+||||||||++|+++|.|+++||.+++++++.+++|| |+||+... +++.+..
T Consensus 127 ~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~a~~~~~L~r~~~RL~~~~~~~~~~~~~G-avGt~a~~~~~~~~dr~~~~~ 205 (436)
T cd03302 127 AEFALEYKDLPTLGFTHYQPAQLTTVGKRACLWIQDLLMDLRNLERLRDDLRFRGVKG-TTGTQASFLDLFEGDHDKVEA 205 (436)
T ss_pred HHHHHHhCCCeeeccccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcC-hhhhhHHHHhcCCchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998 79986322 2223578
Q ss_pred HHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcC--CCCCCCCCCCC
Q 011379 279 IASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPG 356 (487)
Q Consensus 279 v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp--~~~~GSSiMP~ 356 (487)
+.+++++.|||..+ .++ .+++++||+++|++++|+.++++|+|||+||++|+| +||+.+| .+++|||||||
T Consensus 206 v~~~~a~~LGl~~~-~~~-~~~v~~rD~~~e~~~~la~~a~~L~riA~Dl~l~~s-----~~el~e~~~~g~~GSS~MPh 278 (436)
T cd03302 206 LDELVTKKAGFKKV-YPV-TGQTYSRKVDIDVLNALSSLGATAHKIATDIRLLAN-----LKEVEEPFEKGQIGSSAMPY 278 (436)
T ss_pred HHHHHHHHcCCCCC-CCc-hhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CceecccccCCCCCcccCCC
Confidence 88999999999974 233 335799999999999999999999999999999995 8999998 45899999999
Q ss_pred CCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHH
Q 011379 357 KVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLH 436 (487)
Q Consensus 357 K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~ 436 (487)
||||+.+|.++++|+++.|+..++......+++|+|...|...|..++++..+.+.+..++..++++|+||++||++|++
T Consensus 279 KrNPv~~E~i~~~a~~~~g~~~~~~~~~~~~~~Erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~ 358 (436)
T cd03302 279 KRNPMRSERCCSLARHLMNLASNAAQTASTQWFERTLDDSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIR 358 (436)
T ss_pred ccCcHHHHHHHHHHHHHHhhHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHH
Confidence 99999999999999999999999887788999999999999999999999999999999999999999999999999987
Q ss_pred h-----------------hhcHHHHHHHHH----HHHHc------CCCHHHHHHHcC---CCCHHHHhhccCcccccCC
Q 011379 437 E-----------------KIGYDNAAAVAK----KAHKE------GTTLKDAALKLG---VLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 437 ~-----------------~ig~~~A~~ia~----~a~~~------g~~~re~~~~~~---~l~~eel~~~ldP~~~~g~ 485 (487)
. .+||+.||+++. ++.++ |.+|+|.+.++. . +++||++++||+.|+|.
T Consensus 359 ~~~g~~~se~~~~~L~~~g~~~~~Ah~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~dp~~~~g~ 436 (436)
T cd03302 359 QELPFMATENIIMAAVKAGGDRQDAHERIRVLSHQAAAVVKQEGGDNDLIERIKNDAYFKP-IWDELDALLDPKTFIGR 436 (436)
T ss_pred hccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHhcCCCcCC-CHHHHHHHhCHHhhhCc
Confidence 7 378888876554 45567 899999988763 3 88999999999999983
No 32
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=1.6e-71 Score=578.55 Aligned_cols=364 Identities=25% Similarity=0.277 Sum_probs=319.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc
Q 011379 76 PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH 154 (487)
Q Consensus 76 ~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~ 154 (487)
+++++++|++|+.|++.++.+.| ||++++++|.++++.+..+ ...-+.... ..+ ..+ ..+++.+++.+|+
T Consensus 7 ~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~l~~~~~d-~~~~~~~~~---~~~----~~v-~~~e~~L~~~~g~ 77 (381)
T cd01595 7 EENKLRTWLDVEAALAEAQAELGLIPKEAAEEIRAAADVFEID-AERIAEIEK---ETG----HDV-IAFVYALAEKCGE 77 (381)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcccCC-HHHHHHHHH---HhC----cCc-HHHHHHHHHHhhh
Confidence 78999999999999999999999 9999999999999875211 100001110 011 122 3467888999996
Q ss_pred cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhH
Q 011379 155 KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEF 234 (487)
Q Consensus 155 ~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~ 234 (487)
+.|+| +| +|+||||+++|+++|++++.+ ..+.+.|..|+++|.++|++|+|++||||||+||||||||||||
T Consensus 78 ~~~~~-vH------~g~S~nDi~~Ta~~l~lr~~l-~~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~Q~A~P~T~G~~~ 149 (381)
T cd01595 78 DAGEY-VH------FGATSQDINDTALALQLRDAL-DIILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFGKKF 149 (381)
T ss_pred HhhhH-ee------cCcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCChHHhhcCCCCCcchhHHHHH
Confidence 57888 88 599999999999999987664 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCCCCccCCchhhHhh-cchHHHHHHHH
Q 011379 235 SGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALA-AHDAFVETSGA 313 (487)
Q Consensus 235 a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~-~rD~~~e~~~~ 313 (487)
++|+++|.|+++||.+++++++.+|||| |+|||.+.++ ++..+.+++|++|||+.+. ++|+. +||+++|++++
T Consensus 150 ~~~~~~L~r~~~rL~~~~~~~~~~~lGg-a~G~g~~~~~-~~~~~~~~~a~~LGl~~~~----~~~~~~~rd~~~e~~~~ 223 (381)
T cd01595 150 AVWAAELLRHLERLEEARERVLVGGISG-AVGTHASLGP-KGPEVEERVAEKLGLKVPP----ITTQIEPRDRIAELLSA 223 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhchhhhccc-HhhhHhhcCC-cHHHHHHHHHHHcCCCCCC----CCCCcccchHHHHHHHH
Confidence 9999999999999999999999999999 8898877765 7788999999999997533 44544 99999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCcccceEEcCC--CCCCCCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhh
Q 011379 314 LNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFEL 391 (487)
Q Consensus 314 L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~--~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~ 391 (487)
++.++.+|+|||+||++|+| +|||||.+|+ +++|||||||||||+.+|.++++|+++.|+..++.... .+++|+
T Consensus 224 l~~~~~~l~ria~Dl~~~~s---~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~er 299 (381)
T cd01595 224 LALIAGTLEKIATDIRLLQR---TEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL-VQWHER 299 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHh---ccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHhh-hHhhcc
Confidence 99999999999999999996 6899999996 48999999999999999999999999999998887755 788999
Q ss_pred hhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhcHHHHHHHHHHHHHcCCCHHHHHHHcC
Q 011379 392 NVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIGYDNAAAVAKKAHKEGTTLKDAALKLG 466 (487)
Q Consensus 392 ~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig~~~A~~ia~~a~~~g~~~re~~~~~~ 466 (487)
+...|.+.|+.++++..+..++..++..|+++|+||+++|+++++...|+-.+..++..++++|+++++++...+
T Consensus 300 d~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~g~~~ae~~~~~L~~~g~g~~~Ah~~v~ 374 (381)
T cd01595 300 DLSDSSVERNILPDAFLLLDAALSRLQGLLEGLVVNPERMRRNLDLTWGLILSEAVMMALAKKGLGRQEAYELVK 374 (381)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccCHHHHHHHHHHHHHhCCCHhHHHHHHH
Confidence 999999999999999999999999999999999999999999998755677788888888888999999987543
No 33
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=7.9e-71 Score=573.57 Aligned_cols=370 Identities=21% Similarity=0.240 Sum_probs=315.2
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCc
Q 011379 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGS 132 (487)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~~~ 132 (487)
+||...++++ |+ +++++++|++||.|+++++.+.| ||++++++|.++++...+. . ..+ .. ..
T Consensus 1 ~~~~~~~~~~--fs--------~~~~~~~~l~ve~A~a~~l~~~Glip~~~a~~I~~~l~~~~~~-~-~~~--~~---~~ 63 (387)
T cd01360 1 RYGRPEMKKI--WS--------EENKFRKWLEVEAAVCEAWAKLGVIPAEAAEEIRKKAKFDVER-V-KEI--EA---ET 63 (387)
T ss_pred CCCchHHHHH--hC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcCHHH-H-HHH--HH---Hh
Confidence 5899999999 73 78999999999999999999999 9999999999998643211 0 000 00 11
Q ss_pred ccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 011379 133 GTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFK 212 (487)
Q Consensus 133 ~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~~ 212 (487)
+.+ + ..++..+.+++| +.|+| +| +|+||||+++|+++|++++. +..+.+.|..++++|.++|++|+
T Consensus 64 ~~d----v-~~~e~~L~~~~g-~~~~~-lH------~G~S~nDi~~ta~~L~lr~~-l~~l~~~l~~l~~~L~~~A~~~~ 129 (387)
T cd01360 64 KHD----V-IAFVTAIAEYCG-EAGRY-IH------FGLTSSDVVDTALALQLREA-LDIILKDLKELLEVLKKKALEHK 129 (387)
T ss_pred CCC----h-HHHHHHHHHHHH-Hhhhh-ee------CCCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 111 1 125667788888 56777 88 59999999999999998665 57999999999999999999999
Q ss_pred cccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCCCCc
Q 011379 213 DIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFV 292 (487)
Q Consensus 213 d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~ 292 (487)
|++||||||+|||||+|||||+++|+++|.|+++||.+++++++.+|||| |+||+.+.+ ..+.++++++|||+.+
T Consensus 130 ~t~m~grTH~Q~A~P~TfG~~l~~~~~~L~r~~~rL~~~~~~~~~~~lgg-a~Gt~~~~~----~~~~~~~a~~LG~~~~ 204 (387)
T cd01360 130 DTVMVGRTHGIHAEPTTFGLKFALWYAEFKRHLERLKEARERILVGKISG-AVGTYANLG----PEVEERVAEKLGLKPE 204 (387)
T ss_pred CCeeehhhcCCcceeehHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccch-HhhcCccCC----HHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999998 889987654 4567899999999986
Q ss_pred cCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCC--CCCCCCCCCCCCChhhhHHHHHHH
Q 011379 293 TAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVC 370 (487)
Q Consensus 293 ~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~--~~~GSSiMP~K~NP~~~E~i~~~a 370 (487)
+..| ++++||+++|++++++.++++|+|||+||++|++ +|||||.+|. +++|||||||||||+.+|.++++|
T Consensus 205 ~~~~---~~~~rD~~~e~~~~la~~~~~L~ria~Dl~~~s~---~e~gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~~a 278 (387)
T cd01360 205 PIST---QVIQRDRHAEYLSTLALIASTLEKIATEIRHLQR---TEVLEVEEPFSKGQKGSSAMPHKRNPILSENICGLA 278 (387)
T ss_pred CCCC---cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccccceecCCCCCCCCcCCCCCCCCCHHHHHHHHHH
Confidence 5554 4799999999999999999999999999999994 6899999984 579999999999999999999999
Q ss_pred HHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhcHHHHHHHHHH
Q 011379 371 AQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIGYDNAAAVAKK 450 (487)
Q Consensus 371 ~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig~~~A~~ia~~ 450 (487)
+.+.|+..++.. ....+++++...|...|..++.+......+...+..++++|+||++||++|++..-|+..|++++..
T Consensus 279 ~~~~g~~~~~~~-~~~~~~~rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la~~ 357 (387)
T cd01360 279 RVIRSNVIPALE-NVALWHERDISHSSVERVILPDATILLDYILRRMTRVLENLVVYPENMRRNLNLTKGLIFSQRVLLA 357 (387)
T ss_pred HHHHHHHHHHHh-hhHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999865433 4445667777777777888887777777777777899999999999999999753478889999999
Q ss_pred HHHcCCCHHHHHHHcC
Q 011379 451 AHKEGTTLKDAALKLG 466 (487)
Q Consensus 451 a~~~g~~~re~~~~~~ 466 (487)
++++|++|++|+...+
T Consensus 358 L~~~g~~~r~Ah~~V~ 373 (387)
T cd01360 358 LVEKGMSREEAYEIVQ 373 (387)
T ss_pred HHHcCCCHHHHHHHHH
Confidence 9999999999987643
No 34
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=7.1e-70 Score=556.69 Aligned_cols=335 Identities=24% Similarity=0.261 Sum_probs=298.8
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCccccccc
Q 011379 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQT 130 (487)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~ 130 (487)
+.+||.+.++++ |+ ++++|++|++||+|+|.+|.++| ||++++++|.++|+++. .+..+.
T Consensus 3 ~~~~~~~~~~~i--~s--------d~~~i~~~~~ve~A~a~al~~~Gii~~~~a~~I~~a~~~~~---------~d~~~~ 63 (338)
T TIGR02426 3 DGLFGDPAALEL--FS--------DRAFLRAMLDFEAALARAQADAGLIPAEAAAAIEAACAAAA---------PDLEAL 63 (338)
T ss_pred ccccCCHHHHHH--cC--------CHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhccCC---------CCHHHH
Confidence 358999999999 73 78999999999999999999999 99999999999998752 333344
Q ss_pred CcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 131 GSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVE 210 (487)
Q Consensus 131 ~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~ 210 (487)
+.++..+++..-.++..+.+.+|++.|+| || +|+||||+++|+++|++++. +..+.+.|..|+++|.++|++
T Consensus 64 ~~~~~~~~~~~~~~~~~l~~~~g~~~g~~-vH------~G~S~nD~~~Ta~~L~lr~~-l~~l~~~l~~l~~~L~~~A~~ 135 (338)
T TIGR02426 64 AHAAATAGNPVIPLVKALRKAVAGEAARY-VH------RGATSQDVIDTSLMLQLRDA-LDLLLADLGRLADALADLAAR 135 (338)
T ss_pred HhHHHhcCCcHHHHHHHHHHHhCccccCc-cc------CCCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 44555555553345677789999777888 88 59999999999999998765 579999999999999999999
Q ss_pred cccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCCC
Q 011379 211 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLP 290 (487)
Q Consensus 211 ~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~ 290 (487)
|+|++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|||| |+|||.+. ++|+..+.+++++.|||+
T Consensus 136 ~~~~~m~grTH~Q~A~P~T~G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lGg-avGtg~~~-~~~~~~v~~~~a~~LGl~ 213 (338)
T TIGR02426 136 HRDTPMTGRTLLQQAVPTTFGLKAAGWLAAVLRARDRLAALRTRALPLQFGG-AAGTLAAL-GTRGGAVAAALAARLGLP 213 (338)
T ss_pred hCCCceecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcc-hhccCCCc-cchHHHHHHHHHHHhCcC
Confidence 9999999999999999999999999999999999999999999999999999 89998664 467888999999999999
Q ss_pred CccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCCCCCCCChhhhHHHHHHH
Q 011379 291 FVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVC 370 (487)
Q Consensus 291 ~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSiMP~K~NP~~~E~i~~~a 370 (487)
.+..+ |+++||+++|++++++.++++|+|||+||++|+ ++||||+.++ .++|||||||||||+.+|.++++|
T Consensus 214 ~~~~~----~~~~rd~~~e~~~~l~~la~~l~ria~Dl~l~s---~~e~gei~~~-~~~GSSiMPqK~NP~~~E~i~~~a 285 (338)
T TIGR02426 214 LPALP----WHTQRDRIAEFGSALALVAGALGKIAGDIALLS---QTEVGEVFEA-GGGGSSAMPHKRNPVGAALLAAAA 285 (338)
T ss_pred CCCCc----chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCChhhhC-CCCCcccCCCCCCcHHHHHHHHHH
Confidence 85433 579999999999999999999999999999999 5689999884 479999999999999999999999
Q ss_pred HHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhcc
Q 011379 371 AQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGI 424 (487)
Q Consensus 371 ~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l 424 (487)
+++.|+..++. ..+.+++|++...|..+|.++|+++++.++++..+..++++|
T Consensus 286 ~~~~g~~~~~~-~~~~~~~Er~~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~l 338 (338)
T TIGR02426 286 RRVPGLAATLH-AALPQEHERSLGGWHAEWETLPELVRLTGGALRQAQVLAEGL 338 (338)
T ss_pred HHHHHHHHHHH-HhchHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999988775 468889999999999999999999999999999999898875
No 35
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=4.1e-68 Score=583.26 Aligned_cols=365 Identities=20% Similarity=0.271 Sum_probs=309.7
Q ss_pred HhHHHhhcCccCCCCCCCCHHHHHHHHHHH-----HHHHHHHHHcC-CCHHHHHHHHHHHHHHHccc-cCCCCccccccc
Q 011379 58 QTQRSLQNFDIGGERERMPEPIVRAFGILK-----KCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGK-LNDHFPLVVWQT 130 (487)
Q Consensus 58 ~t~rai~~f~~~~~~~~~~~~~i~a~~~ve-----~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~-~~~~f~~~~~~~ 130 (487)
+....+..|+ +...++.++.++ .|++.++.+.| ||++++++|.++++++.... .+..+..+.
T Consensus 11 ~~~~~~~~~~--------~~~~~~~~l~~e~i~~~~A~a~~l~~~Giip~~~a~~I~~~l~~~~~~~~~~~~~~~~~--- 79 (614)
T PRK12308 11 AADTRFKQFN--------DSLRFDYRLAEQDIVGSIAWSKALLSVGVLSEEEQQKLELALNELKLEVMEDPEQILLS--- 79 (614)
T ss_pred cccHHHHHHh--------cCHHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCC---
Confidence 3444555563 457789999999 99999999999 99999999999998874221 111222211
Q ss_pred CcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 131 GSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVE 210 (487)
Q Consensus 131 ~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~ 210 (487)
....+|.+|++.+++.+| +.|+| +| +|+||||+++|+++|++++. +..+.+.|..|+++|.++|++
T Consensus 80 -----~~ed~h~~ie~~L~~~~g-~~~~~-iH------~g~S~nD~~~Ta~~L~~r~~-~~~l~~~l~~l~~~l~~~a~~ 145 (614)
T PRK12308 80 -----DAEDIHSWVEQQLIGKVG-DLGKK-LH------TGRSRNDQVATDLKLWCRQQ-GQQLLLALDQLQQQMVNVAER 145 (614)
T ss_pred -----ccccHHHHHHHHHHHHhc-ccccc-ee------cCCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 124477889999999998 78888 89 59999999999999998765 579999999999999999999
Q ss_pred cccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHHHcCC
Q 011379 211 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSL 289 (487)
Q Consensus 211 ~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl 289 (487)
|+||+||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+ ||+++.++ +++|+.|||
T Consensus 146 ~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgga~agt~~~~~r-------~~~a~~LG~ 218 (614)
T PRK12308 146 HQGTVLPGYTHLQRAQPVTFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGSGALAGTAYPIDR-------EALAHNLGF 218 (614)
T ss_pred cCCCEeecCcCCcccEEecHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhccccCCCCCCCH-------HHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999998 89877775 589999999
Q ss_pred CCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhHHHHH
Q 011379 290 PFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTM 368 (487)
Q Consensus 290 ~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E~i~~ 368 (487)
+. +..|.+||+++||++++++++|+.++++|+|||+||++|+| +|+|++++|+. ++|||||||||||+.+|.+++
T Consensus 219 ~~-~~~n~~da~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~ss---~e~g~~el~~~~~~gSSiMPqK~NP~~~E~i~~ 294 (614)
T PRK12308 219 RR-ATRNSLDSVSDRDHVMELMSVASISMLHLSRLAEDLIFYNS---GESGFIELADTVTSGSSLMPQKKNPDALELIRG 294 (614)
T ss_pred CC-CcCCHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcCCEEeCccCCCccccCcCccCCcHHHHHHH
Confidence 97 67899999999999999999999999999999999999996 47998887765 799999999999999999999
Q ss_pred HHHHhhcchHHHHHhccc--cchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhcHHHHHH
Q 011379 369 VCAQVIGNHVAITVGGSN--GHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIGYDNAAA 446 (487)
Q Consensus 369 ~a~~v~G~~~~~~~~~~~--~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig~~~A~~ 446 (487)
+|+++.|+.+++.....+ ..++++...+ -..+++++..+..++. ++..|+++|+||++||++|+.. ||..|++
T Consensus 295 ~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~--~~~l~~~~~~~~~~l~-~~~~~l~~l~v~~~rm~~~~~~--g~~~a~~ 369 (614)
T PRK12308 295 KTGRVYGALAGMMMTVKALPLAYNKDMQED--KEGLFDALDTWNDCME-MAALCFDGIKVNGERTLEAAKQ--GYANATE 369 (614)
T ss_pred HHHHHhhHHHHHHHHHcCCchhhccchhhh--HHHHHHHHHHHHHHHH-HHHHHhCcCEECHHHHHHHHHc--CHHHHHH
Confidence 999999999888753332 2455554443 1235566666666666 5588999999999999999977 8888888
Q ss_pred HHHHHHHcCCCHHHHHH
Q 011379 447 VAKKAHKEGTTLKDAAL 463 (487)
Q Consensus 447 ia~~a~~~g~~~re~~~ 463 (487)
+++.++++|++|++|+.
T Consensus 370 la~~L~~~g~~~r~Ah~ 386 (614)
T PRK12308 370 LADYLVAKGIPFREAHH 386 (614)
T ss_pred HHHHHHHcCCCHHHHHH
Confidence 88888888889888865
No 36
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=6.5e-68 Score=603.58 Aligned_cols=378 Identities=18% Similarity=0.199 Sum_probs=325.1
Q ss_pred cCccCh-HhHHHhhcCccCCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCccccc
Q 011379 52 DKLWGA-QTQRSLQNFDIGGE-RERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVW 128 (487)
Q Consensus 52 ~~~~g~-~t~rai~~f~~~~~-~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~ 128 (487)
..+|+. ++++++ | +++ ....+++++++|++++.||+.++.++| ||++++++|.+++.++.+... ..+..++
T Consensus 412 ~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~Ah~~~l~~~gii~~~~a~~I~~~l~~~~~~~~-~~~~~~~- 485 (887)
T PRK02186 412 AARPGLPPEAQAI--V--YGPGASEAPLAELDHLAAIDEAHLVMLGDTGIVAPERARPLLDAHRRLRDAGF-APLLARP- 485 (887)
T ss_pred ccccCCChhhhce--e--cCCCcchhhhhhhHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHhHH-hhCcCCC-
Confidence 346653 777787 4 333 334578999999999999999999999 999999999999987753222 2333332
Q ss_pred ccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 129 QTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKS 208 (487)
Q Consensus 129 ~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A 208 (487)
..++.+++ |++++++++|++.|+| +| +|+||||+++|+++|++++. +..+.+.|..|+++|.++|
T Consensus 486 ---~~~~~~~~----~e~~L~~~~g~~~~~~-lH------~grSrnD~v~T~~~l~lr~~-~~~l~~~l~~l~~~L~~~A 550 (887)
T PRK02186 486 ---APRGLYML----YEAYLIERLGEDVGGV-LQ------TARSRNDINATTTKLHLREA-TSRAFDALWRLRRALVFKA 550 (887)
T ss_pred ---CCcchHHH----HHHHHHHHhChhhhcc-cC------ccccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 22344554 7888999999678888 99 59999999999999998766 5799999999999999999
Q ss_pred HHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHHHc
Q 011379 209 VEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEET 287 (487)
Q Consensus 209 ~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~L 287 (487)
++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+||||+|. ||++++++ +++|++|
T Consensus 551 ~~~~~~~m~g~TH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~r~~~~plG~aag~gt~~~~~~-------~~~a~~L 623 (887)
T PRK02186 551 SANVDCALPIYSQYQPALPGSLGHYLLAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDP-------EFVARLL 623 (887)
T ss_pred HHcCCCEeecCccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999764 77777766 5799999
Q ss_pred CCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhHHH
Q 011379 288 SLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEAL 366 (487)
Q Consensus 288 Gl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E~i 366 (487)
||+. +..|++||+++||+++|+++++++++.+|+|||+||++|+| +|||||.+|+. ++|||||||||||+.+|.+
T Consensus 624 Gf~~-~~~n~~da~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~~---~e~g~i~~~~~~~~gSSiMPqKrNP~~~E~i 699 (887)
T PRK02186 624 GFEQ-PAPNSLDAVASRDGVLHFLSAMAAISTVLSRLAQDLQLWTT---REFALVSLPDALTGGSSMLPQKKNPFLLEFV 699 (887)
T ss_pred CCCC-CccCHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCcEECCCccccccCCCCCCCCCcHHHHH
Confidence 9997 78899999999999999999999999999999999999996 68999999985 7999999999999999999
Q ss_pred HHHHHHhhcchHHHHHhccccchhhhhhhhhHHH-hHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhcHHHHH
Q 011379 367 TMVCAQVIGNHVAITVGGSNGHFELNVFKPMIAS-GLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIGYDNAA 445 (487)
Q Consensus 367 ~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~-~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig~~~A~ 445 (487)
+++|+++.|+..+++....+.+++++...+...| .+++++..+..++..+ ..++++|+||++||+++++. ++..|+
T Consensus 700 r~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-~~~l~~l~v~~~rm~~~~~~--~~~~at 776 (887)
T PRK02186 700 KGRAGVVAGALASASAALGKTPFSNSFEAGSPMNGPIAQACAAIEDAAAVL-VLLIDGLEADQARMRAHLED--GGVSAT 776 (887)
T ss_pred HHHHHHHhhHHHHHHHHHccCCcccccchhhhhHHHHHHHHHHHHHHHHHH-HHHHhhCEECHHHHHHHHhc--CcchHH
Confidence 9999999999998887777888886644444333 4667777777777766 68999999999999999988 777899
Q ss_pred HHHHHHHHc-CCCHHHHHHH
Q 011379 446 AVAKKAHKE-GTTLKDAALK 464 (487)
Q Consensus 446 ~ia~~a~~~-g~~~re~~~~ 464 (487)
+++..++++ |++||+|+..
T Consensus 777 ~la~~L~~~~g~~fr~Ah~~ 796 (887)
T PRK02186 777 AVAESLVVRRSISFRSAHTQ 796 (887)
T ss_pred HHHHHHHHhCCCCHHHHHHH
Confidence 999998884 9999999774
No 37
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=4e-67 Score=537.94 Aligned_cols=334 Identities=19% Similarity=0.233 Sum_probs=291.7
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCccccccc
Q 011379 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQT 130 (487)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~ 130 (487)
+.+||.+.++.+ |+ ++++|++|++||+|+|.+|.++| ||++++++|.++|+++. .+..+.
T Consensus 12 ~~~~~~~~~~~~--~s--------~~~~i~a~l~vE~A~a~a~~~~G~Ip~~~a~~I~~a~~~~~---------~d~~~~ 72 (351)
T PRK05975 12 SGLFGDDEIAAL--FS--------AEADIAAMLAFEAALAEAEAEHGIIPAEAAERIAAACETFE---------PDLAAL 72 (351)
T ss_pred hccCCCHHHHHH--cC--------cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCC---------CCHHHH
Confidence 348999999999 74 78999999999999999999999 99999999999997642 111111
Q ss_pred Ccccccc-cchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 131 GSGTQSN-MNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSV 209 (487)
Q Consensus 131 ~~~~~~~-~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~ 209 (487)
+.++..+ +++++++ ..+.+.+|++.|+| || +|+||||++||+++|++++. +..|.+.|..|+++|.++|+
T Consensus 73 ~~~~~~~g~~v~~~v-~~l~~~~g~~~~~~-vH------~G~TsnDi~dTa~~L~lr~~-l~~l~~~L~~l~~~L~~lA~ 143 (351)
T PRK05975 73 RHATARDGVVVPALV-RQLRAAVGEEAAAH-VH------FGATSQDVIDTSLMLRLKAA-SEILAARLGALIARLDALEA 143 (351)
T ss_pred hhHHHhcCCcHHHHH-HHHHHHhCchhhCc-cc------CCCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 2222222 5666655 45567787666666 66 69999999999999987655 57999999999999999999
Q ss_pred HcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCC
Q 011379 210 EFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSL 289 (487)
Q Consensus 210 ~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl 289 (487)
+|+||+|+||||+|||+||||||||++|+++|.|+++||.+++++++.+|||| |+||+.+. ++++..+.+++|++|||
T Consensus 144 ~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lGG-AvGt~~~~-~~~~~~~~~~~a~~LGl 221 (351)
T PRK05975 144 TFGQNALMGHTRMQAAIPITVADRLASWRAPLLRHRDRLEALRADVFPLQFGG-AAGTLEKL-GGKAAAVRARLAKRLGL 221 (351)
T ss_pred HhCCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc-HhccCccC-CCcHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999 99998775 34568899999999999
Q ss_pred CCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCCCCCCCCCCCCChhhhHHHHHH
Q 011379 290 PFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMV 369 (487)
Q Consensus 290 ~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~~GSSiMP~K~NP~~~E~i~~~ 369 (487)
+.++ +|+++||++++++++|+.++++|+|||+||++|+| +| ||+.+|. ++|||||||||||+.+|.++++
T Consensus 222 ~~~~-----~~~~~rD~~~e~~~~la~la~~l~kiA~Di~ll~s---~e-gev~~~~-~~GSS~MPhKrNPv~~E~i~~~ 291 (351)
T PRK05975 222 EDAP-----QWHSQRDFIADFAHLLSLVTGSLGKFGQDIALMAQ---AG-DEISLSG-GGGSSAMPHKQNPVAAETLVTL 291 (351)
T ss_pred CCCc-----chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CC-CcccCCC-CCccCCCCCCcCcHHHHHHHHH
Confidence 8642 36799999999999999999999999999999995 69 9999997 6999999999999999999999
Q ss_pred HHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhcccc
Q 011379 370 CAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQA 426 (487)
Q Consensus 370 a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~v 426 (487)
++.+.++..... .+...++|++...|..+|..+|+++.+.+++...+..+++||++
T Consensus 292 ar~~~~~~~~~~-~~~~~~~er~~~~~~~e~~~lp~~~~~~~~~l~~~~~ll~~l~~ 347 (351)
T PRK05975 292 ARFNATQVSGLH-QALVHEQERSGAAWTLEWMILPQMVAATGAALRLALELAGNIRR 347 (351)
T ss_pred HHHHHHHHHHHH-hcccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHh
Confidence 999998876554 46778999999999999999999999999999999999999875
No 38
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-67 Score=510.97 Aligned_cols=373 Identities=21% Similarity=0.248 Sum_probs=330.5
Q ss_pred cCccCh----HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCccc
Q 011379 52 DKLWGA----QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLV 126 (487)
Q Consensus 52 ~~~~g~----~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~ 126 (487)
.++||+ .+.+.++.|+.|.+ .+..++++=++--+|+|.++.+.| |+.++.++|.+.+++|..+...+.|.+.
T Consensus 6 ~KlWGGRFtg~~dp~m~~fn~Si~---ydk~ly~~Dv~gSkaya~~L~~~glit~~e~dkil~gLe~i~~ew~~~kf~~~ 82 (464)
T KOG1316|consen 6 QKLWGGRFTGAVDPLMEKFNASIP---YDKRLYEADVDGSKAYAKALEKAGLITEAELDKILKGLEKIRREWAAGKFKLN 82 (464)
T ss_pred hhhhccccCCCCCHHHHHhhccCc---cchHHHHhhhhhhHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHhcCceEeC
Confidence 478986 56778888988865 466777777777899999999999 9999999999999999887777788776
Q ss_pred ccccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 127 VWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHS 206 (487)
Q Consensus 127 ~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~ 206 (487)
+ +.+++|+ +.|+++.|++| +.+++ +|+ ||||||++.|.+|||+++. ++.+...+..|++++.+
T Consensus 83 p----~dEDvHt----anErrL~eliG-~~agK-lHT------gRSRNDQV~TDlRLw~r~~-i~~~~~~l~~L~~~~v~ 145 (464)
T KOG1316|consen 83 P----NDEDVHT----ANERRLTELIG-EIAGK-LHT------GRSRNDQVVTDLRLWLRDA-IDTILGLLWNLIRVLVD 145 (464)
T ss_pred C----Cchhhhh----HHHHHHHHHHh-hhhhh-ccc------CccccchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 5 2455454 47899999999 66777 997 8999999999999999776 57999999999999999
Q ss_pred HHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHH
Q 011379 207 KSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAE 285 (487)
Q Consensus 207 ~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~ 285 (487)
+|+.+.|++||||||+|.|||+.|.||+.+++.+|.||..||.+++.|+|++|||+||. |+++++|| +.+++
T Consensus 146 rAe~~~dvlmpGYTHLQRAQpvrwsH~LlSha~~l~~D~~Rl~q~~~R~n~~PLGagALAGnpl~iDR-------~~la~ 218 (464)
T KOG1316|consen 146 RAEAELDVLMPGYTHLQRAQPVRWSHWLLSHAEQLTRDLGRLVQIRKRLNQLPLGAGALAGNPLGIDR-------EFLAE 218 (464)
T ss_pred HHhhccCeeccChhhhhhccCchhHHHHHHHHHHHHhHHHHHHHHHHHhccCCcccchhcCCCCCccH-------HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 99999998 56999
Q ss_pred HcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhH
Q 011379 286 ETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCE 364 (487)
Q Consensus 286 ~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E 364 (487)
.|||.. ++.|+++|++.||+++|+..+.++++.+|+|+|+|+++|+|. |||+|.+.+. .+|||+||||+||+.+|
T Consensus 219 ~LgF~~-v~~NSm~AvsDRDFVvef~fw~sm~m~HlSRlaEdlIiy~t~---EF~Fv~lSDaySTGSSlMPQKKNpDslE 294 (464)
T KOG1316|consen 219 ELGFEG-VIMNSMDAVSDRDFVVEFLFWASMVMTHLSRLAEDLIIYSTK---EFGFVTLSDAYSTGSSLMPQKKNPDSLE 294 (464)
T ss_pred hcCCcc-cchhhhhccccchhHHHHHHHHHHHHHHHHHHhhHhheeecc---ccCceeeccccccCcccCCCCCCCCHHH
Confidence 999998 789999999999999999999999999999999999999974 8999999987 89999999999999999
Q ss_pred HHHHHHHHhhcchHHHHHhccccchhhh-----hhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhh
Q 011379 365 ALTMVCAQVIGNHVAITVGGSNGHFELN-----VFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKI 439 (487)
Q Consensus 365 ~i~~~a~~v~G~~~~~~~~~~~~~~e~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~i 439 (487)
.+|+++++|.|+++++++....-+..+| --+| ++++...+.+.+... ..++++|+||+++|.+.|..
T Consensus 295 LlRgksgrV~gdl~g~lmt~KG~PstYnkDlQeDKep-----~Fds~~tv~~~l~v~-tgv~stltvn~e~m~~aLt~-- 366 (464)
T KOG1316|consen 295 LLRGKSGRVFGDLTGLLMTLKGLPSTYNKDLQEDKEP-----LFDSSKTVSDSLQVA-TGVISTLTVNQENMEKALTP-- 366 (464)
T ss_pred HhccccceehhhhHHHHHHhcCCccccccchhhhhhH-----HHhhHHHHHHHHHHH-HHHhhheeECHHHHhhccCc--
Confidence 9999999999999999886432222222 1223 688899999999987 57999999999999999843
Q ss_pred cHHHHHHHHHHHHHcCCCHHHHHHH
Q 011379 440 GYDNAAAVAKKAHKEGTTLKDAALK 464 (487)
Q Consensus 440 g~~~A~~ia~~a~~~g~~~re~~~~ 464 (487)
.-.|+++|.+++++|+|||+++.-
T Consensus 367 -dmlATdlA~YLVrKGvPFRqtHhi 390 (464)
T KOG1316|consen 367 -DMLATDLAYYLVRKGVPFRQTHHI 390 (464)
T ss_pred -hhhHhHHHHHHHHcCCCchhhhhh
Confidence 556999999999999999998663
No 39
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=1.6e-66 Score=540.49 Aligned_cols=360 Identities=14% Similarity=0.092 Sum_probs=300.3
Q ss_pred HHhhcC-ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCccccccc
Q 011379 61 RSLQNF-DIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNM 138 (487)
Q Consensus 61 rai~~f-~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~~~~~~~~~ 138 (487)
..++.| +.|- ..|..++..-+.+..||+.++.+.| ||++++++|.++++++.+ +.|++++ ..+|+
T Consensus 15 ~~~~~~~~~s~---~~D~~l~~~di~~~~AH~~mL~~~gii~~~e~~~i~~~L~~i~~----~~~~~~~----~~EDv-- 81 (434)
T PRK06389 15 DFYDNIVKDDI---DADKNLIKYEIINLLAYHVALAQRRLITEKAPKCVINALIDIYK----NGIEIDL----DLEDV-- 81 (434)
T ss_pred HHHHHHHCCCH---HHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHc----CCCcCCC----CCCch--
Confidence 446666 3221 3467788888889999999999999 999999999999999976 3455554 23444
Q ss_pred chHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Q 011379 139 NANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIG 218 (487)
Q Consensus 139 ~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~~d~~~~G 218 (487)
|..||+++++++| +.|++ +|+ ||||||++.|++||++++++ ..+...|..|+++|+++ |.|++|||
T Consensus 82 --h~~iE~~L~~~~G-~~gg~-lht------gRSRNDqvat~~RL~~r~~~-~~~~~~l~~l~~~l~~~---~~dtimpG 147 (434)
T PRK06389 82 --HTAIENFVIRRCG-DMFKN-FRL------FLSRNEQVHADLNLFIIDKI-IEIEKILYEIIKVIPGF---NLKGRLPG 147 (434)
T ss_pred --HHHHHHHHHHHhc-hhhhh-hcc------cCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH---ccCceecc
Confidence 4558999999999 78999 996 89999999999999998876 58999999999999965 99999999
Q ss_pred cccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHHHHHHHcCCCCccCCch
Q 011379 219 RTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENK 297 (487)
Q Consensus 219 rTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~ 297 (487)
|||+|||||+|||||+++|+++|.|+++||.+++++++.+|||.|+. ||.+++++ +++|++|||+. +..|+
T Consensus 148 yTHlQ~AqP~TfG~~l~a~a~~L~rd~~RL~~~~~r~~~~pLGaga~~Gt~~~idr-------~~~A~lLGf~~-~~~n~ 219 (434)
T PRK06389 148 YTHFRQAMPMTVNTYINYIKSILYHHINNLDSFLMDLREMPYGYGSGYGSPSSVKF-------NQMSELLGMEK-NIKNP 219 (434)
T ss_pred ccccCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCCchhhH-------HHHHHHhCCCC-CCCCC
Confidence 99999999999999999999999999999999999999999987665 88877754 68999999998 67788
Q ss_pred hhHhhcchH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhHHHHHHHHHhhc
Q 011379 298 FEALAAHDA-FVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIG 375 (487)
Q Consensus 298 ~da~~~rD~-~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~G 375 (487)
+++..++|+ ++++++++++++++|+|||+|+++|+|+ |++++|+. ++|||||||||||+.+|.++++|+++.|
T Consensus 220 ~~a~~~~~~~~~e~~~~la~la~~LsRiA~Dl~l~ss~-----g~ielpd~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g 294 (434)
T PRK06389 220 VYSSSLYIKTIENISYLISSLAVDLSRICQDIIIYYEN-----GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESIS 294 (434)
T ss_pred chhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----CEEEecCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHH
Confidence 877667655 8899999999999999999999999972 78899976 8999999999999999999999999999
Q ss_pred chHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHhhhcHHHHHHHHHHHHHcC
Q 011379 376 NHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEKIGYDNAAAVAKKAHKEG 455 (487)
Q Consensus 376 ~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~~ig~~~A~~ia~~a~~~g 455 (487)
..+++.....+..+.++--.-..-..+++.+..+.+++..+ ..++++++||+++ ++.+.. ++ .|+++|..++++|
T Consensus 295 ~~~~~~~~~~n~~~~y~~D~q~~~~~~~~~~~~~~~~l~l~-~~~i~~l~~~~~~-~~a~~~--~~-~ATdlA~~lv~~G 369 (434)
T PRK06389 295 VLSFIAQSELNKTTGYHRDFQIVKDSTISFINNFERILLGL-PDLLYNIKFEITN-EKNIKN--SV-YATYNAWLAFKNG 369 (434)
T ss_pred HHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCeECHHH-HhhccC--CC-cHHHHHHHHHHcC
Confidence 98877654332222221110111234778888888888887 5799999999999 555544 44 4999998888999
Q ss_pred CCHHHHHHHc
Q 011379 456 TTLKDAALKL 465 (487)
Q Consensus 456 ~~~re~~~~~ 465 (487)
+|||+|+...
T Consensus 370 ipFR~AH~~V 379 (434)
T PRK06389 370 MDWKSAYAYI 379 (434)
T ss_pred CCHHHHHHHH
Confidence 9999998764
No 40
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=1.8e-66 Score=530.39 Aligned_cols=322 Identities=39% Similarity=0.482 Sum_probs=274.0
Q ss_pred HHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHccccCCCCcccccccCcccccccchHHHHHHHHHHHhCccCCC
Q 011379 80 VRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE 158 (487)
Q Consensus 80 i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~ 158 (487)
+++|+++|+|+++++.+.| ||++++++|.++|.++..+..... ..+.+.+++.++++ ++.+.+++|++.|+
T Consensus 1 ~~~~l~ve~A~a~al~~~Gli~~~~a~~I~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~----e~~l~~~~g~~~~~ 72 (325)
T cd01334 1 IRADLQVEKAHAKALAELGLLPKEAAEAILAALDEILEGIAADQ----VEQEGSGTHDVMAV----EEVLAERAGELNGG 72 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhCccccC----eeeCCCCccHHHHH----HHHHHHHhccccCC
Confidence 4678999999999999999 999999999999999864332211 13445566667775 55667788865566
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHH
Q 011379 159 KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYT 238 (487)
Q Consensus 159 ~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~ 238 (487)
| +| +|+||||+++|+++|++++. +..+.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+
T Consensus 73 ~-lH------~G~S~nDi~~ta~~l~lr~~-~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~ 144 (325)
T cd01334 73 Y-VH------TGRSSNDIVDTALRLALRDA-LDILLPALKALIDALAAKAEEHKDTVMPGRTHLQDAQPTTLGHELAAWA 144 (325)
T ss_pred C-Cc------cCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccCcEeecccccccCccccHHHHHHHHH
Confidence 7 77 69999999999999998765 5699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHH
Q 011379 239 TQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVA 318 (487)
Q Consensus 239 ~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la 318 (487)
++|.|+++||.+++++++.+|||+||+||+...+ ..+.+++++.|||.. +.+|+++++++||+++|++++++.++
T Consensus 145 ~~l~r~~~rL~~~~~~~~~~~lG~gA~g~~~~~~----~~~~~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~~~l~~~~ 219 (325)
T cd01334 145 AELERDLERLEEALKRLNVLPLGGGAVGTGANAP----PIDRERVAELLGFFG-PAPNSTQAVSDRDFLVELLSALALLA 219 (325)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCcHhHHhCcCCCC----cchHHHHHHHhcCcC-cCcCHHHHHhCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999977998765443 345589999999965 68899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcccceEEcCCC-CCCCCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhh
Q 011379 319 ASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPM 397 (487)
Q Consensus 319 ~~L~kiA~Di~ll~S~pr~eigev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~ 397 (487)
.+|+|||+||++|+| +|||||.+|+. ++|||||||||||+.+|.++++|+++.|...++.....+.+++.+. .+.
T Consensus 220 ~~l~ria~Dl~~~~~---~e~gev~~~~~~~~gSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~~-~~~ 295 (325)
T cd01334 220 VSLSKIANDLRLLSS---GEFGEVELPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGGPLEDNV-DSP 295 (325)
T ss_pred HHHHHHHHHHHHHcC---CCCCeEECCCCCCCCcccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHhcCchhhhc-ccH
Confidence 999999999999996 58999999987 8999999999999999999999999999999888776766666443 333
Q ss_pred HHHh-HHHHHHHHHHHHHHHHHHhhhccccC
Q 011379 398 IASG-LLHSLRLLGDASASFEKNCVRGIQAN 427 (487)
Q Consensus 398 ~~~~-~l~~~~~l~~~~~~~~~~~l~~l~vn 427 (487)
..|. +++.+..+.+++..+ ..++++|+||
T Consensus 296 ~~~~~l~~~~~~~~~~l~~~-~~~~~~l~v~ 325 (325)
T cd01334 296 VEREALPDSFDLLDAALRLL-TGVLEGLEVN 325 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhCcCEeC
Confidence 4444 455555566666665 6788999987
No 41
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=3.7e-65 Score=538.56 Aligned_cols=399 Identities=18% Similarity=0.161 Sum_probs=311.5
Q ss_pred cccccCccCh--HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-C---CHHHHHH---HHHHHHHHHccc
Q 011379 48 LVPSDKLWGA--QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-L---DPAIGKA---IMQAAQEVAEGK 118 (487)
Q Consensus 48 ~~p~~~~~g~--~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i---~~~~a~~---I~~a~~~v~~~~ 118 (487)
..|.+.+|+. ..++.+ |+ +++++++|++||.|+++++++.| + |+..++. |.+.+.++..+
T Consensus 9 ~~p~~~ry~~~~~e~~~~--~s--------~~~~~~~~l~vE~A~a~a~a~~g~~~~ip~~~~~~~~~i~~~~~~~~~~- 77 (456)
T PRK09285 9 LSPLDGRYASKTAALRPI--FS--------EFGLIRYRVQVEVEWLIALAAHPGIPEVPPFSAEANAFLRAIVENFSEE- 77 (456)
T ss_pred CCCCccccCCCCHHHHHH--hC--------HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCcc-
Confidence 4577779988 788888 73 68999999999999999999997 4 5544444 77766332100
Q ss_pred cCCCCcccccccCcccccccchHHHHHHHHHHHhCc-----cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHH-
Q 011379 119 LNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH-----KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR- 192 (487)
Q Consensus 119 ~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~-----~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~- 192 (487)
.+..+...... ...++ ..+++.+.+.+|. +.|+| || +|+|||||+||+++|++++. +..
T Consensus 78 -----d~~~i~~~e~~-~~hdv-~a~~~~l~~~~~~~~~~~~~~~~-vH------~G~Ts~Di~dTa~~L~lr~~-l~~~ 142 (456)
T PRK09285 78 -----DAARIKEIERT-TNHDV-KAVEYFLKEKLAGLPELEAVSEF-IH------FACTSEDINNLSHALMLKEA-REEV 142 (456)
T ss_pred -----cHHHHHHHHHH-hCCCh-HHHHHHHHHHhcccCcchhHHhH-cc------CCCChhhHHHHHHHHHHHHH-HHHH
Confidence 01100000000 00111 2256777888872 46677 77 59999999999999998765 567
Q ss_pred HHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCC-CCC
Q 011379 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG-LNT 271 (487)
Q Consensus 193 l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~-~~~ 271 (487)
|.+.|..++++|.++|++|+|++|+||||+|||+|||||+||++|+++|.|+++||.++ ...+++|| |+||. .+.
T Consensus 143 l~~~L~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~---~~~g~~~G-AvGt~~a~~ 218 (456)
T PRK09285 143 LLPALRELIDALKELAHEYADVPMLSRTHGQPATPTTLGKEMANVAYRLERQLKQLEAV---EILGKING-AVGNYNAHL 218 (456)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeeceecCCCCeeehHHHHHHHHHHHHHHHHHHHHHH---HHhhhccc-ccccHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999998 45677777 89983 221
Q ss_pred C--CCc-hHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCCCC
Q 011379 272 K--KGF-DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENE 348 (487)
Q Consensus 272 ~--~~~-~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~~~ 348 (487)
. ++. +..+.+.+++.|||..++.+|+ +++||++++++++|+.++++|+|||+||++|++ ..|++|.. ++++
T Consensus 219 ~~~~~~~~~~v~~~~~~~LGL~~~~~~~~---v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~--~~e~~e~~-~~~~ 292 (456)
T PRK09285 219 AAYPEVDWHAFSREFVESLGLTWNPYTTQ---IEPHDYIAELFDAVARFNTILIDLDRDVWGYIS--LGYFKQKT-KAGE 292 (456)
T ss_pred hhcCCccHHHHHHHHHHHhCCCCCCCccc---hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhhhccC-CCCC
Confidence 0 222 4578889999999987444432 699999999999999999999999999999997 33444422 4579
Q ss_pred CCCCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCH
Q 011379 349 PGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANR 428 (487)
Q Consensus 349 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~ 428 (487)
+|||||||||||+.+|.++++++.+.+....+.......++|++...|...|.+ +.+..+...+...+..++++|+||+
T Consensus 293 ~GSS~MPhKrNPv~~E~i~~~a~~~~~~~~~~~~~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~~l~~~~~~l~~L~V~~ 371 (456)
T PRK09285 293 IGSSTMPHKVNPIDFENSEGNLGLANALLEHLAAKLPISRWQRDLTDSTVLRNL-GVAFGYSLIAYDSLLKGLGKLEVNE 371 (456)
T ss_pred CCCCCCCCCcCchHHHHHHHHHHHHHHHHHHHHhhccHHhhCCcCchhhhhcch-HHHHHHHHHHHHHHHHHHccCEECH
Confidence 999999999999999999999999998876665433356789988888888888 6666666666666688999999999
Q ss_pred HHHHHHHHh--------------hhcHHHHHHHHH----HHHHcCCCHHHH---HHHcCCCCHHHHhhccCcccccCC
Q 011379 429 ERISKLLHE--------------KIGYDNAAAVAK----KAHKEGTTLKDA---ALKLGVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 429 erm~~~l~~--------------~ig~~~A~~ia~----~a~~~g~~~re~---~~~~~~l~~eel~~~ldP~~~~g~ 485 (487)
+||++|++. .+|++.|+++++ .+.++|.+|+|+ +.++..++ ++| .+|||++|+|.
T Consensus 372 ~rm~~nl~~~~~~~sE~~~~~l~~~gr~~A~~~v~~~~~~~~~~~~~~~e~~~~l~~~~~~~-~~l-~~~~p~~ylg~ 447 (456)
T PRK09285 372 ARLAEDLDANWEVLAEPIQTVMRRYGIENPYEKLKELTRGKRITAEALREFIDGLDLPEEAK-ARL-KALTPANYIGL 447 (456)
T ss_pred HHHHHHHHhcCcchHHHHHHHHHHhChHhHHHHHHHHHHHHHhccCCHHHHHHHhcCCHhHH-HHH-HcCCHHHHHhh
Confidence 999999876 568888876655 445789999999 76554444 779 99999999985
No 42
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=7.9e-64 Score=523.28 Aligned_cols=324 Identities=18% Similarity=0.144 Sum_probs=267.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCH------HHHHHHHHHHHHH--------HccccCCCCcccccccCcccccccch
Q 011379 76 PEPIVRAFGILKKCAAKVNMEYG-LDP------AIGKAIMQAAQEV--------AEGKLNDHFPLVVWQTGSGTQSNMNA 140 (487)
Q Consensus 76 ~~~~i~a~~~ve~A~A~a~~e~G-i~~------~~a~~I~~a~~~v--------~~~~~~~~f~~~~~~~~~~~~~~~~~ 140 (487)
+++++++|++||.|++.+++++| ||+ +.++.|.+++... .+......+|+
T Consensus 7 ~~~~~~~~l~vE~ala~a~a~~g~Ip~~~~~~~~aa~~i~~~~~~~~~~d~~~~~~~~~~~~hdv--------------- 71 (425)
T cd01598 7 EYALIKYRVQVEVEWLIALSNLEEIPEVPPLTKEELKFLRAIIENFSEEDALRIKEIEATTNHDV--------------- 71 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHhhcCccCHHHHHHHHHHHCCCc---------------
Confidence 78999999999999999999999 999 9999999887531 11111111222
Q ss_pred HHHHHHHHHHHhCc-----cCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Q 011379 141 NEVIANRAAEILGH-----KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIV 215 (487)
Q Consensus 141 ~evi~~~~~e~lg~-----~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~~d~~ 215 (487)
..+++.+.+.+|. +.++| || +|+||||++||+++|++++.+.+.+.+.|..|+++|.++|++|+||+
T Consensus 72 -~al~~~l~~~~g~~~~~~~~~~~-vH------~G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~ 143 (425)
T cd01598 72 -KAVEYFLKEKFETLGLLKKIKEF-IH------FACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVP 143 (425)
T ss_pred -HHHHHHHHHHhcccccchhhhhH-hc------cCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 1256778888872 34556 77 69999999999999998776445678999999999999999999999
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCC----CCc-hHHHHHHHHHHcCCC
Q 011379 216 KIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK----KGF-DVKIASAVAEETSLP 290 (487)
Q Consensus 216 ~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~----~~~-~~~v~~~la~~LGl~ 290 (487)
|+||||+|||+||||||||++|+++|.|+++||.++. ..+++|| |+|| ++.. +++ +..+.+.+++.|||.
T Consensus 144 m~GrTH~Q~A~P~TfG~~~a~w~~~L~r~~~RL~~~~---~~g~~gG-avGt-~~~~~~~~~~~~~~~~~~~~a~~LgL~ 218 (425)
T cd01598 144 MLSRTHGQPATPTTLGKELAVFVYRLERQYKQLKQIE---ILGKFNG-AVGN-FNAHLVAYPDVDWRKFSEFFVTSLGLT 218 (425)
T ss_pred eecccCCccCeehhHHHHHHHHHHHHHHHHHHHHHHH---HhheeeC-chhh-hhhhhhccCcccHHHHHHHHHHHhCcC
Confidence 9999999999999999999999999999999999983 4556877 9998 3322 333 468899999999999
Q ss_pred CccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEc--CCCCCCCCCCCCCCChhhhHHHHH
Q 011379 291 FVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELIL--PENEPGSSIMPGKVNPTQCEALTM 368 (487)
Q Consensus 291 ~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~l--p~~~~GSSiMP~K~NP~~~E~i~~ 368 (487)
.++.+|+ +++||+++|++++|+.++++|+|||+||++|+| + ||+.+ +++++|||||||||||+.+|++++
T Consensus 219 ~~~~~~~---v~~rD~~~e~~~~La~la~~L~kia~Di~ll~s---~--ge~~e~~~~~~~GSS~MPhKrNPv~~E~i~~ 290 (425)
T cd01598 219 WNPYTTQ---IEPHDYIAELFDALARINTILIDLCRDIWGYIS---L--GYFKQKVKKGEVGSSTMPHKVNPIDFENAEG 290 (425)
T ss_pred CCCcccc---hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---C--cceeecCCCCCCCcCCCCCCcCchHHHHHHH
Confidence 8766652 699999999999999999999999999999996 3 44544 356899999999999999999999
Q ss_pred HHHHhhcchHHHHHhcc-ccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHh
Q 011379 369 VCAQVIGNHVAITVGGS-NGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (487)
Q Consensus 369 ~a~~v~G~~~~~~~~~~-~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~ 437 (487)
+++.+.+....+.. .. ..++|++...|...|.+ +.+..+...+...+..++++|+||++||++|++.
T Consensus 291 ~a~~a~~~~~~~~~-~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~al~~~~~ll~~L~v~~~rm~~nl~~ 358 (425)
T cd01598 291 NLGLSNALLNHLSA-KLPISRLQRDLTDSTVLRNI-GVAFGHSLIAYKSLLRGLDKLELNEARLLEDLDA 358 (425)
T ss_pred HHHHHHHHHHHHHh-hhhhhhhcccccchhhhccH-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHh
Confidence 99988888655543 44 56788888888888888 6666655655666688999999999999999977
No 43
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=9.7e-65 Score=514.70 Aligned_cols=307 Identities=32% Similarity=0.435 Sum_probs=261.3
Q ss_pred CCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc-cccCCC
Q 011379 45 GPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE-GKLNDH 122 (487)
Q Consensus 45 g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~~-~~~~~~ 122 (487)
|.+++|.+.+|+..+.++..+|. +......++.|+++|+++.| ||++++++|.++|+++.+ ....+.
T Consensus 1 Gr~~~~~~~~~~~~s~~~~~~~~-----------l~~~~~~~e~a~~~a~a~~g~i~~~~a~~I~~a~~~i~~~~~~~~~ 69 (312)
T PF00206_consen 1 GRYEVPTDEMYAIFSDRARFDFW-----------LAEYDIRVEAALAKALAEAGIIPKEAADAIVKALEEILEDGDLDDA 69 (312)
T ss_dssp EEEEEETTHHHHHHHHHHHHHHH-----------HHSHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHTCTHGH
T ss_pred CCcCCchHHHHHHHCHHHHhCCE-----------eeccHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhccccc
Confidence 77899999999999888875442 22233338999999999999 999999999999999887 555667
Q ss_pred CcccccccCcccccccchHHHHHHHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 123 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHN 202 (487)
Q Consensus 123 f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~ 202 (487)
|+++..+++.++++++++++++. |++| .. .+++.|||+|+||||+++|+++|++++.++..|.+.|..|++
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~----e~~~----~~-~~~~~~vH~G~Ts~Di~~Ta~~l~lr~~~~~~l~~~l~~l~~ 140 (312)
T PF00206_consen 70 FELDEIEEDIGHAVEANLNEVLG----ELLG----EP-PEAGGWVHYGRTSNDIVDTALRLQLRDALLELLLERLKALID 140 (312)
T ss_dssp HHHCSCSSSHHHHHHHHHHHHHH----HHHT----HS-SGGGGGTTTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhccchhHHHHHHHHHhh----hhhh----cc-ccccccccCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 88888877777666666655553 4444 12 566777778999999999999999877654679999999999
Q ss_pred HHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccc-cCCCCCCCCchHHHHH
Q 011379 203 SLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIAS 281 (487)
Q Consensus 203 ~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~ 281 (487)
+|.++|++|+||+||||||+|||+|||||+||++|+++|.|+++||++++++++.+||||++. ||++++++.|...+.+
T Consensus 141 ~L~~~a~~~~~t~~~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~gt~~~~~~~~~~~~~~ 220 (312)
T PF00206_consen 141 ALAELAEEHKDTPMPGRTHGQPAQPTTFGHKLAAWADELARDLERLEEARKRLNVSPLGGAVGAGTSLGIDREFQERVAE 220 (312)
T ss_dssp HHHHHHHHTTTSEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEETTTTTTTSSHTTSHHHHHHHHHH
T ss_pred HHHHHHHhhcCceeccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHhHHHHHhccCCCccccccccCcchhhhHHh
Confidence 999999999999999999999999999999999999999999999999999999999999433 6666666666667777
Q ss_pred HHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCC--CCCCCCCCCCCCC
Q 011379 282 AVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVN 359 (487)
Q Consensus 282 ~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~--~~~GSSiMP~K~N 359 (487)
.+++.+||+ .+..|.++++++||++++++++|+.++.+|+|||+||++|+|+ |+||+++|. +++||||||||||
T Consensus 221 ~L~~~~~l~-~~~~~~~~~~~~rd~~~e~~~~l~~l~~~l~kia~Dl~~~~s~---e~g~~~~~~~~~~~GSS~MP~K~N 296 (312)
T PF00206_consen 221 ELGEFTGLG-VPAPNWHDAVSSRDRLAELASALALLAGTLSKIAEDLRLLSST---EIGEVEEPFPEGQVGSSIMPHKRN 296 (312)
T ss_dssp HHHHHHCST-EECSSHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTST---TTSSEEEEGGGSSSCSSSSTTCEE
T ss_pred hhhhhhhcc-cchhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---ceeeeecccccccCCCccCCCCCC
Confidence 777777777 4788999999999999999999999999999999999999975 588888874 5779999999999
Q ss_pred hhhhHHHHHHHHHhhc
Q 011379 360 PTQCEALTMVCAQVIG 375 (487)
Q Consensus 360 P~~~E~i~~~a~~v~G 375 (487)
|+.+|.++++|++|.|
T Consensus 297 P~~~E~i~~~a~~v~G 312 (312)
T PF00206_consen 297 PVILENIRGLARQVIG 312 (312)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhhcCcC
Confidence 9999999999999987
No 44
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=2e-62 Score=517.16 Aligned_cols=390 Identities=17% Similarity=0.150 Sum_probs=304.0
Q ss_pred cccccCccCh--HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-C---CH---HHHHHHHHHHHHH----
Q 011379 48 LVPSDKLWGA--QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-L---DP---AIGKAIMQAAQEV---- 114 (487)
Q Consensus 48 ~~p~~~~~g~--~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i---~~---~~a~~I~~a~~~v---- 114 (487)
..|.+.+|+. +.++++ |+ +++++++|++||.|++.++++.| | |+ +.++.|.+++.++
T Consensus 12 ~~pl~~ry~~~~~e~~~i--fS--------d~a~~~~~l~vE~ala~a~a~~g~i~~~P~i~~~aa~~i~~~~~~~~~~d 81 (458)
T PLN02848 12 LSPLDGRYWSKVKDLRPI--FS--------EFGLIRYRVLVEVKWLLKLSQIPEVTEVPPFSDEANSFLEGIIAGFSVDD 81 (458)
T ss_pred CCCchhhhcCCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCHhh
Confidence 3578889998 889999 74 78999999999999999999999 9 88 9999998877322
Q ss_pred ----HccccCCCCcccccccCcccccccchHHHHHHHHHHHhCc--c---CCCcccccccccCCCCChhhHHHHHHHHHH
Q 011379 115 ----AEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH--K---RGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 185 (487)
Q Consensus 115 ----~~~~~~~~f~~~~~~~~~~~~~~~~~~evi~~~~~e~lg~--~---~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~ 185 (487)
.+......+++. .++..+.+.++. + .++| +| +|+|||||+||+++|++
T Consensus 82 ~~~~~~~e~~t~hdv~----------------a~~~~l~~~~~~~~~~~~~~~~-vH------~G~TsqDi~dTa~~L~l 138 (458)
T PLN02848 82 ALEVKKIERVTNHDVK----------------AVEYFLKQKCKSHPELAKVLEF-FH------FACTSEDINNLSHALML 138 (458)
T ss_pred HHHHHHHHHHhCCCcH----------------HHHHHHHHHhccccchhhhhCc-cc------CCCCHHHHHHHHHHHHH
Confidence 111011112221 235677888862 2 3455 66 69999999999999998
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCccc
Q 011379 186 AMETNSR-LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTA 264 (487)
Q Consensus 186 ~~~~~~~-l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~A 264 (487)
++. +.. |.+.|..|+++|.++|++|+|++|+||||+|||+|||||+||++|+++|.|+++||.++. ..+++|| |
T Consensus 139 r~a-~~~~l~~~L~~l~~aL~~lA~~~~dt~m~GRTH~Q~A~PiTfG~~~a~w~~~L~r~~~rL~~~~---l~g~~~G-A 213 (458)
T PLN02848 139 KEG-VNSVVLPTMDEIIKAISSLAHEFAYVPMLSRTHGQPASPTTLGKEMANFAYRLSRQRKQLSEVK---IKGKFAG-A 213 (458)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHH---hccEeec-c
Confidence 765 567 999999999999999999999999999999999999999999999999999999998872 3467777 7
Q ss_pred ccCCCCC---CCCc-hHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccc
Q 011379 265 VGTGLNT---KKGF-DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLG 340 (487)
Q Consensus 265 vGT~~~~---~~~~-~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eig 340 (487)
|||.... .+++ +..+.+.+++.|||...+.. ..+++||+++|++++|+.++.+|+|||+||+.|+ |+|
T Consensus 214 vGt~aa~~~~~~~~d~~~v~~~la~~LGL~~~~~~---~~v~~rD~~~e~~~~La~~a~~l~kia~Di~~~~-----e~g 285 (458)
T PLN02848 214 VGNYNAHMSAYPEVDWPAVAEEFVTSLGLTFNPYV---TQIEPHDYMAELFNAVSRFNNILIDFDRDIWSYI-----SLG 285 (458)
T ss_pred cchhhhhhhccCCCCHHHHHHHHHHHhCCCCCCch---hhHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hcC
Confidence 8874332 1445 37899999999999852222 2369999999999999999999999999998877 477
Q ss_pred eEEcC--CCCCCCCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHH
Q 011379 341 ELILP--ENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEK 418 (487)
Q Consensus 341 ev~lp--~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 418 (487)
|+.++ ++++|||||||||||+.+|.++++++.+.|....+....+.+++|++...|...|.+ +.+..+...+...+.
T Consensus 286 e~~e~~~~~~~GSS~MP~KrNPv~~E~i~~~a~~~~~~~~~~~~~~~~~~~eRD~~~s~~e~~~-~~~~~~~~~al~~~~ 364 (458)
T PLN02848 286 YFKQITKAGEVGSSTMPHKVNPIDFENSEGNLGLANAELSHLSMKLPISRMQRDLTDSTVLRNM-GVGLGHSLLAYKSTL 364 (458)
T ss_pred CcccccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHhcCcchhhccccchhhhhccH-HHHHHHHHHHHHHHH
Confidence 77655 368999999999999999999999999999998887544777899988888888888 666665555555567
Q ss_pred HhhhccccCHHHHHHHHHh--------------hhcHHHHHHHHHHHHH-cCCC---HHHHHHHcCCCCHHHHhh--ccC
Q 011379 419 NCVRGIQANRERISKLLHE--------------KIGYDNAAAVAKKAHK-EGTT---LKDAALKLGVLNSEEFDN--LVV 478 (487)
Q Consensus 419 ~~l~~l~vn~erm~~~l~~--------------~ig~~~A~~ia~~a~~-~g~~---~re~~~~~~~l~~eel~~--~ld 478 (487)
.++++|+||++||++|++. .+|...||++++++.. +.++ +++..... .++++.-++ .+.
T Consensus 365 ~~l~~L~v~~~rm~~nl~~~~~~~sE~~~~~l~~~G~~~A~e~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~ 443 (458)
T PLN02848 365 RGIGKLQVNEARLAEDLDQTWEVLAEPIQTVMRRYGVPEPYEKLKELTRGRAVTKESMREFIEGL-ELPEEAKDQLLKLT 443 (458)
T ss_pred HHHccCEECHHHHHHHHHccchhHHHHHHHHHHHhChHHHHHHHHHHHHHccCCHHHHHHHHHHc-CCCHHHHHHHHhCC
Confidence 8999999999999999877 4566677777766543 2331 11111111 244333333 357
Q ss_pred cccccCC
Q 011379 479 PEKMIGP 485 (487)
Q Consensus 479 P~~~~g~ 485 (487)
|.+|+|-
T Consensus 444 ~~~y~g~ 450 (458)
T PLN02848 444 PHTYIGA 450 (458)
T ss_pred chhhhch
Confidence 9999984
No 45
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=7.1e-41 Score=337.75 Aligned_cols=401 Identities=19% Similarity=0.183 Sum_probs=310.8
Q ss_pred ccccccCccCh-HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHccccCCC
Q 011379 47 ILVPSDKLWGA-QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG---LDPAIGKAIMQAAQEVAEGKLNDH 122 (487)
Q Consensus 47 ~~~p~~~~~g~-~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G---i~~~~a~~I~~a~~~v~~~~~~~~ 122 (487)
+++|...+|.+ ..+-.+ |+ ..+....|-+++--+|.+..++| |+++.++.+...++- .. ..
T Consensus 6 ~~~pls~ry~~~~~l~~~--~s--------~~~~~~twr~lw~~lA~ae~~lgL~~itk~ai~e~~s~~~~-e~----~d 70 (481)
T KOG2700|consen 6 YKSPLSGRYASISELNPI--FS--------DRNKFSTWRRLWLWLAEAEKELGLTTITKEAIEEMKSSRDI-EN----ID 70 (481)
T ss_pred CCCcccceeccccccchh--hh--------hhhhhhhhhHHHHhhhhhhhcCCcccchHHHHHHHHhhccc-cc----cc
Confidence 78899888876 555555 43 23555666666666666665554 899988888776541 10 01
Q ss_pred CcccccccCcccccccchHHHHH--HHHHHHhCccCCCcccccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011379 123 FPLVVWQTGSGTQSNMNANEVIA--NRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVL 200 (487)
Q Consensus 123 f~~~~~~~~~~~~~~~~~~evi~--~~~~e~lg~~~g~~~iH~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L 200 (487)
|+.-.-.++ +. -++|.+ +.+.+.|.... ++ +| +|+|+.++.|.+.-+.++ +..+.+.+.|...
T Consensus 71 ~~~l~~ee~-----r~-~hdVmahvh~~~~~cp~aa-gi-ih------lgatsc~vtdnadli~~r-d~~k~i~~~l~~v 135 (481)
T KOG2700|consen 71 FTALSPEEG-----RY-RHDVMAHVHSFGELCPIAA-GI-IH------LGATSCFVTDNADLIELR-DASKLILPYLAGV 135 (481)
T ss_pred hhhcChhhh-----hh-cccHHHHHHHHHhhcchhc-ce-EE------eeeeeeeecCCccceech-hHHHHHHHHHHHH
Confidence 111100000 00 122322 34466666443 46 88 599999999999877765 4568999999999
Q ss_pred HHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCCCCCCC------C
Q 011379 201 HNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKK------G 274 (487)
Q Consensus 201 ~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~------~ 274 (487)
++.|...+.+|++++|.||||+|+|+|+|||++..-|.++|.+++++|..+++++....++| |.||..+... +
T Consensus 136 Idrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~~~~~qel~~~l~~f~~~~~~~~~~~~kg-a~gtqasf~~l~~~~~~ 214 (481)
T KOG2700|consen 136 IDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELLRDLERFHRARTDVRFRGLKG-ATGTQASFLSLFLGDMD 214 (481)
T ss_pred HHHHHHHHHHhccceecccccCccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccc-chhhHHHHHHhhcccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 8999544321 1
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccceEEcCC--CCCCCC
Q 011379 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSS 352 (487)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~--~~~GSS 352 (487)
.-+++.+.+++.+||..+.+.+ ....+|+...+..+.|+.++++..|+|.||++++. |+|+.+|. ++.|||
T Consensus 215 kv~~ld~Lv~k~~gf~~~~~~T--GQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~~-----~~ev~epFea~q~gsS 287 (481)
T KOG2700|consen 215 KVEKLDSLVTKELGFVPMYIVT--GQTYSRKTDAEEVAPLASLGATAHKYATDIRLLAK-----FAEVEEPFEAHQIGSS 287 (481)
T ss_pred HHHHHHHHHHHHhCCCcccccc--CCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhhccccccccccc
Confidence 2234556888999999876665 34788999999999999999999999999999994 99999994 599999
Q ss_pred CCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchhhhhhhhhHHHhHHHHHHHHHHHHHHHHHHhhhccccCHHHHH
Q 011379 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (487)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~l~vn~erm~ 432 (487)
.||+||||+.||.++++++.++.+.+..+..++-.|+|+....+-+.|-++|..++.+++.+....++++|+.|.+++|+
T Consensus 288 aMp~krNpm~~E~itslar~l~~~v~~al~~~~~qw~Ertl~dSa~~rivlP~~Fl~ad~~L~~~~ni~~gl~v~p~~i~ 367 (481)
T KOG2700|consen 288 AMPYKRNPMRCERITSLARHLRPYVTQALNTASVQWHERTLDDSANRRIVLPDAFLTADGNLGTLLNILEGLVVYPKVIE 367 (481)
T ss_pred cCCCCCCCchhHHHhHHHHHHHHHHHHHhhhHHHHHhhcccccccccceechHHHHHHHHHHHHHHHHHhhcccccHHHH
Confidence 99999999999999999999999987776656778888877666677779999999999999977889999999999999
Q ss_pred HHHHh-----------------hhcHHHHHHHHH----HH----HHcCCCHHHHHHH--c--CCCCHHHHhhccCccccc
Q 011379 433 KLLHE-----------------KIGYDNAAAVAK----KA----HKEGTTLKDAALK--L--GVLNSEEFDNLVVPEKMI 483 (487)
Q Consensus 433 ~~l~~-----------------~ig~~~A~~ia~----~a----~~~g~~~re~~~~--~--~~l~~eel~~~ldP~~~~ 483 (487)
++++. ...|+.|++... ++ ..+|.++.+.... + +....||++.+|||.+|+
T Consensus 368 r~i~~e~~~~~~eni~mAL~~~g~srq~ahe~I~~L~~~a~~~v~~e~g~~~~ie~~k~~~~~~~v~ee~~~ll~p~~f~ 447 (481)
T KOG2700|consen 368 RNIRDELPFMVLENIIMALVKAGLSRQEAHEGIRKLSHQAAQVVKQEGGDNDLIERAKEDPTFKPVKEELDSLLDPLNFT 447 (481)
T ss_pred HHHHhhhhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHhcccccccchHHHHHhhccchhcc
Confidence 99877 223555654333 22 3456665443332 2 467889999999999999
Q ss_pred CC
Q 011379 484 GP 485 (487)
Q Consensus 484 g~ 485 (487)
|.
T Consensus 448 gr 449 (481)
T KOG2700|consen 448 GR 449 (481)
T ss_pred cc
Confidence 85
No 46
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=1.8e-35 Score=287.09 Aligned_cols=168 Identities=41% Similarity=0.520 Sum_probs=153.8
Q ss_pred ccccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCccccchhhhHHHHHHHH
Q 011379 162 HPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQV 241 (487)
Q Consensus 162 H~~~hvn~G~SsnDi~~Ta~~l~~~~~~~~~l~~~L~~L~~~L~~~A~~~~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l 241 (487)
|...|||+|+||||+.+|+++++++.. +..+.+.+..+..++..++++|++++||||||+|+|+|+||||+|.+|.+.|
T Consensus 32 ~~~~~~h~g~s~~d~~~t~~~~~~~~~-l~~l~~~l~~~~~~l~~~a~~~~~~~~~~~th~q~A~p~t~g~~~~~~~~~l 110 (231)
T cd01594 32 HGSALVHKGRSSNDIGTTALRLALRDA-LDDLLPLLKALIDALALKAEAHKGTVMPGRTHLQDAQPVTLGYELRAWAQVL 110 (231)
T ss_pred cCCCCCCCCCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCEeecccccccCccccHHHHHHHHHHHH
Confidence 434478899999999999999988765 5799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCcccccCCCCCCCCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHH
Q 011379 242 KYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASL 321 (487)
Q Consensus 242 ~r~~~RL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L 321 (487)
.|+++||.++ +++++++.|+.++.+|
T Consensus 111 ~~~~~rL~~~------------------------------------------------------~~~~~~~~l~~~~~~l 136 (231)
T cd01594 111 GRDLERLEEA------------------------------------------------------AVAEALDALALAAAHL 136 (231)
T ss_pred HHHHHHHHHH------------------------------------------------------HHHHHHHHHHHHHHHH
Confidence 9999999988 8899999999999999
Q ss_pred HHHHHHHHHhccCCCcccceEEcCC--CCCCCCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhcccc
Q 011379 322 MKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNG 387 (487)
Q Consensus 322 ~kiA~Di~ll~S~pr~eigev~lp~--~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~ 387 (487)
+|||+|+++|++.| ++++.+|+ .++|||+||||+||+.+|.+++++..+.|....+.....++
T Consensus 137 ~r~a~d~~~~~~~~---~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~~~~~~~~~~~~~~~~~ 201 (231)
T cd01594 137 SKIAEDLRLLLSGE---FGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTALKGG 201 (231)
T ss_pred HHHHHHHHHHcCCC---CCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHhcc
Confidence 99999999999865 77777776 48999999999999999999999999999988776655444
No 47
>PRK08937 adenylosuccinate lyase; Provisional
Probab=99.96 E-value=2.7e-29 Score=242.29 Aligned_cols=167 Identities=26% Similarity=0.269 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcccceEEcCC--CCCCCCCCCCCCChhhhHHHHHHHHHhhcchHHHHHhccccchh
Q 011379 313 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFE 390 (487)
Q Consensus 313 ~L~~la~~L~kiA~Di~ll~S~pr~eigev~lp~--~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~~~e 390 (487)
+++.++.+|+|||+||++|+| +|||||.+|. +++|||||||||||+.+|.+++.|.++.|+..++.... .+++|
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s---~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~e 97 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQR---SEIREVEEPFAKGQKGSSAMPHKRNPIGSERITGLARVLRSYLVTALENV-PLWHE 97 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---cccceeecccccCCCCCccCCCccCcHHHHHHHHHHHHHHHHHHHHHHHh-HHHhc
Confidence 999999999999999999996 6899999994 58999999999999999999999999999998887655 78899
Q ss_pred hhhhhhhHHHhHHHH-HHHHHHHHHHHHHHhhhccccCHHHHHHHHHh-----------------hhcHHHHHH----HH
Q 011379 391 LNVFKPMIASGLLHS-LRLLGDASASFEKNCVRGIQANRERISKLLHE-----------------KIGYDNAAA----VA 448 (487)
Q Consensus 391 ~~~~~~~~~~~~l~~-~~~l~~~~~~~~~~~l~~l~vn~erm~~~l~~-----------------~ig~~~A~~----ia 448 (487)
+|...|...|..++. +..+..++.. ...|+++++||++||+++++. .+|++.||+ ++
T Consensus 98 rd~~~~~~~~~~l~~~~~~~~~~l~~-~~~~l~~l~v~~~rm~~~~~~~~~~~~a~~l~~~L~~~g~~~~~Ah~~v~~~~ 176 (216)
T PRK08937 98 RDLSHSSAERIALPDAFLALDYILNR-FVNILENLVVFPENIERNLDKTLGFIATERVLLELVEKGMGREEAHELIREKA 176 (216)
T ss_pred cCCchhHHHhhHHHHHHHHHHHHHHH-HHHHHccCEECHHHHHHHHHHhcChHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 999888888855554 5555555555 468999999999999999875 255655654 44
Q ss_pred HHHHHcCCCHHHHHHHcC----CCCHHHHhhccCcccccC
Q 011379 449 KKAHKEGTTLKDAALKLG----VLNSEEFDNLVVPEKMIG 484 (487)
Q Consensus 449 ~~a~~~g~~~re~~~~~~----~l~~eel~~~ldP~~~~g 484 (487)
+.+.++|.++++.+..++ .+++++|+.++||++|+|
T Consensus 177 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~vg 216 (216)
T PRK08937 177 MEAWKNQKDLRELLEADERFTKQLTKEELDELFDPEAFVG 216 (216)
T ss_pred HHHHHhCCCHHHHHHhChHhHhcCCHHHHHHHhCHHhhcC
Confidence 456677888888877764 789999999999999997
No 48
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=98.86 E-value=2.3e-09 Score=80.76 Aligned_cols=48 Identities=44% Similarity=0.780 Sum_probs=42.8
Q ss_pred hhcHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhccCcccccCC
Q 011379 438 KIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 ~ig~~~A~~ia~~a~~~g~~~re~~~~~~~l~~eel~~~ldP~~~~g~ 485 (487)
.|||+.|+++|++|.++|+++||++.+.|.||+++++++|||++++.|
T Consensus 8 ~iGYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p~~mt~P 55 (55)
T PF10415_consen 8 YIGYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDPERMTNP 55 (55)
T ss_dssp HHHHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSHHHHTT-
T ss_pred hhccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCHHHcCCc
Confidence 689999999999999999999999999999999999999999999986
No 49
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) []. This entry represents the C-terminal, seven alpha-helical, domain of adenylosuccinate lyase [].; PDB: 1YIS_A 1C3U_B 1C3C_A 3C8T_A 2PFM_B 1RE5_D 1Q5N_A 2VD6_D 2J91_B 2X75_A.
Probab=97.60 E-value=0.00012 Score=59.76 Aligned_cols=48 Identities=29% Similarity=0.475 Sum_probs=38.0
Q ss_pred hhcHHHHHH----HHHHHHHcCCCHHHHHHHc----CCCCHHHHhhccCcccccCC
Q 011379 438 KIGYDNAAA----VAKKAHKEGTTLKDAALKL----GVLNSEEFDNLVVPEKMIGP 485 (487)
Q Consensus 438 ~ig~~~A~~----ia~~a~~~g~~~re~~~~~----~~l~~eel~~~ldP~~~~g~ 485 (487)
.+|++.||+ +++++.++|.+|+|++.++ +.||+++|+++|||..|+|.
T Consensus 17 G~gR~~Ah~lv~~~a~~a~~~~~~l~e~l~~d~~i~~~ls~~el~~l~dp~~ylg~ 72 (81)
T PF10397_consen 17 GLGRQEAHELVQEAAMEAWENGRDLREVLLADPEIAAYLSEEELEELFDPESYLGN 72 (81)
T ss_dssp TH-HHHHHHHHHHHHHHHHHTTS-HHHHHCTTHHHHTTSHHHHHHHHT-GGGGCTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHhHCCHHHHHhhcCHHHHHhh
Confidence 367887775 5566788999999999965 68999999999999999996
No 50
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B ....
Probab=95.67 E-value=0.0055 Score=48.55 Aligned_cols=42 Identities=17% Similarity=0.285 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHc--------------------------CCCCHHHHhhccCcccccC
Q 011379 442 DNAAAVAKKAHKEGTTLKDAALKL--------------------------GVLNSEEFDNLVVPEKMIG 484 (487)
Q Consensus 442 ~~A~~ia~~a~~~g~~~re~~~~~--------------------------~~l~~eel~~~ldP~~~~g 484 (487)
..|+++|.+++++|+|||+++.-. ..++ +++.++|||+.++.
T Consensus 2 ~~ATdlAD~LVr~GipFR~AH~iVg~~V~~a~~~~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~~~V~ 69 (70)
T PF14698_consen 2 STATDLADYLVRKGIPFREAHHIVGRLVRLAEEEGKPLSELTLEELQEISPEFE-EDVREALDPEASVE 69 (70)
T ss_dssp GGHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTTS-GGGS-HHHHHHH-TT---GGGGGGSSHHHHHT
T ss_pred ccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhhCCHHHHHHHhHHhH-HHHHHHCCHHHHhc
Confidence 457777777777777777775520 2343 78888999988764
No 51
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=90.59 E-value=6.7 Score=41.61 Aligned_cols=57 Identities=11% Similarity=0.115 Sum_probs=39.4
Q ss_pred cccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCH
Q 011379 40 EKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDP 101 (487)
Q Consensus 40 e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~G-i~~ 101 (487)
-++++|-..+|.++.--.+..|.++|++++- ..+.-.+.|-+|+ |+++..++++ +..
T Consensus 43 ae~~lgL~~itk~ai~e~~s~~~~e~~d~~~----l~~ee~r~~hdVm-ahvh~~~~~cp~aa 100 (481)
T KOG2700|consen 43 AEKELGLTTITKEAIEEMKSSRDIENIDFTA----LSPEEGRYRHDVM-AHVHSFGELCPIAA 100 (481)
T ss_pred hhhcCCcccchHHHHHHHHhhccccccchhh----cChhhhhhcccHH-HHHHHHHhhcchhc
Confidence 3477888888876554445555677777653 3456677788885 8999998887 643
No 52
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=89.10 E-value=2 Score=37.18 Aligned_cols=65 Identities=18% Similarity=0.255 Sum_probs=36.4
Q ss_pred HHhhhccccCHHHHHHHHHh--------------hhcHHHHHHHHHHHHHcCCCHH-HHHHH---cCCCCHHHHhh--cc
Q 011379 418 KNCVRGIQANRERISKLLHE--------------KIGYDNAAAVAKKAHKEGTTLK-DAALK---LGVLNSEEFDN--LV 477 (487)
Q Consensus 418 ~~~l~~l~vn~erm~~~l~~--------------~ig~~~A~~ia~~a~~~g~~~r-e~~~~---~~~l~~eel~~--~l 477 (487)
.+-+..|.||+++|.+.|+. ..|++.+++..|+..+ |...- +.+.+ .-.++++.-++ .+
T Consensus 31 lkGl~Kl~vn~~~l~~dL~~nWeVlaEpIQTvmRr~g~~~pYE~LK~lTR-g~~it~~~l~~fI~~L~ip~~~k~~L~~l 109 (115)
T PF08328_consen 31 LKGLGKLEVNEERLAEDLDENWEVLAEPIQTVMRRYGIPNPYEKLKELTR-GKKITKEDLREFIESLDIPEEAKARLLAL 109 (115)
T ss_dssp HHHHHTEEE-HHHHHHHHCT-GGGGHHHHHHHHHHTT-SSHHHHHHHHHT-TS---HHHHHHHHHTSSS-HHHHHHHHH-
T ss_pred HHHHhcccCCHHHHHHHHHHCHHHHHHHHHHHHHHcCCCCHHHHHHHHHc-CCCCCHHHHHHHHHhCCCCHHHHHHHHhc
Confidence 35678899999999999988 5677788887776654 43322 22222 12466655333 35
Q ss_pred Cccccc
Q 011379 478 VPEKMI 483 (487)
Q Consensus 478 dP~~~~ 483 (487)
.|..|+
T Consensus 110 tP~~Y~ 115 (115)
T PF08328_consen 110 TPATYI 115 (115)
T ss_dssp -CCC--
T ss_pred CccccC
Confidence 788775
No 53
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known.
Probab=62.98 E-value=29 Score=26.51 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 011379 78 PIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 115 (487)
Q Consensus 78 ~~i~a~~~ve~A~A~a~~e~G-i~~~~a~~I~~a~~~v~ 115 (487)
++...++.++++..--..+.| |+++.|++|.+..++-.
T Consensus 11 ~l~~qm~e~kK~~idk~Ve~G~iTqeqAd~ik~~id~~~ 49 (59)
T PF10925_consen 11 ALYKQMLELKKQIIDKYVEAGVITQEQADAIKKHIDQRQ 49 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 677888999999999999999 99999999999887654
No 54
>COG2346 Truncated hemoglobins [General function prediction only]
Probab=23.87 E-value=3.2e+02 Score=24.44 Aligned_cols=61 Identities=21% Similarity=0.255 Sum_probs=41.1
Q ss_pred CCCccccccCccChHhHHH-hhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 011379 44 FGPILVPSDKLWGAQTQRS-LQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVA 115 (487)
Q Consensus 44 ~g~~~~p~~~~~g~~t~ra-i~~f~~~~~~~~~~~~~i~a~~~ve~A~A~a~~e~Gi~~~~a~~I~~a~~~v~ 115 (487)
+|....=.. .||.+.+|+ ..+|+| .+....+|+ ...+.+..+.|+|++....|.+.+..+.
T Consensus 59 ~gGp~~y~e-~~ghp~lr~~h~~~~i-------t~~~~d~WL---~~~~~al~ei~~~~e~~~~i~~~~~~~A 120 (133)
T COG2346 59 WGGPPLYTE-RYGHPPLRARHLPFGI-------TPEEFDAWL---GLFADALDEIGLPEELREEILARAERIA 120 (133)
T ss_pred hcCCccccc-ccCCccHHHHccCCCC-------CHHHHHHHH---HHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 344333333 377776776 445544 456777887 4567788888999999999988887654
No 55
>CHL00180 rbcR LysR transcriptional regulator; Provisional
Probab=20.47 E-value=3.7e+02 Score=26.56 Aligned_cols=56 Identities=16% Similarity=0.231 Sum_probs=42.6
Q ss_pred ccccccccccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccCC
Q 011379 212 KDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG 268 (487)
Q Consensus 212 ~d~~~~GrTH~Q~A~P~T~G~~~a~~~~~l~r~~~RL~~~~~~l~~~~lGg~AvGT~ 268 (487)
-++...=|| ...-.||..|..|..++..+.+..+++.+....+...+-|-=-+|+.
T Consensus 47 lg~~Lf~R~-~r~~~lT~~G~~l~~~a~~ll~~~~~~~~~~~~~~~~~~g~l~ig~~ 102 (305)
T CHL00180 47 LNIPLFDRS-KNKASLTEAGELLLRYGNRILALCEETCRALEDLKNLQRGTLIIGAS 102 (305)
T ss_pred hCCEEEEec-CCCceECHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCceEEEEEc
Confidence 356666677 45689999999999999999999999998888776555443223553
No 56
>PF02022 Integrase_Zn: Integrase Zinc binding domain The structure of the N-terminal zinc binding domain.; InterPro: IPR003308 Retroviral integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains: an N-terminal zinc binding domain, a central catalytic core and a C-terminal DNA-binding domain [, ]. Often found as part of the POL polyprotein.; GO: 0008270 zinc ion binding; PDB: 1E0E_A 3F9K_F 1E27_C 1K6Y_B 1WJD_A 1WJB_A 1WJF_A 1WJE_B 3HPG_B 3HPH_C ....
Probab=20.41 E-value=93 Score=21.81 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=14.8
Q ss_pred HHHH-HcCCCHHHHHHHHHHHH
Q 011379 92 KVNM-EYGLDPAIGKAIMQAAQ 112 (487)
Q Consensus 92 ~a~~-e~Gi~~~~a~~I~~a~~ 112 (487)
+++. +.|||+.+|+.|++.|.
T Consensus 13 ~~L~~~f~ip~~vAk~IV~~C~ 34 (40)
T PF02022_consen 13 KALRHKFGIPRLVAKQIVNQCP 34 (40)
T ss_dssp HHHHHHHT--HHHHHHHHHHSC
T ss_pred HHHHHHHccCHHHHHHHHHHCH
Confidence 4444 67899999999999874
No 57
>COG0783 Dps DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]
Probab=20.30 E-value=5e+02 Score=23.84 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHh--hhccCCcccccCCCCCCCCchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHH
Q 011379 233 EFSGYTTQVKYGIDRVICCLPRM--YQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVET 310 (487)
Q Consensus 233 ~~a~~~~~l~r~~~RL~~~~~~l--~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~ 310 (487)
.|-.+...|....+.+....+.+ ....|||.++||. +.+.+...++..+.. ...++.+.++
T Consensus 45 ~F~~lHe~~ee~y~el~~~~DeiAERi~~LGg~p~~t~------------~~~~~~s~ike~~~~-----~~~~~~l~~l 107 (156)
T COG0783 45 NFFALHEKLEELYEELAEHVDEIAERIRALGGVPLGTL------------SEYLKLSSIKEEPGD-----YTAREMLKEL 107 (156)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccH------------HHHHHhCCCcccCCC-----CCHHHHHHHH
Confidence 44445555554444443333332 2367999888872 356666666653222 2456666666
Q ss_pred HHHHHHHHHHHH
Q 011379 311 SGALNTVAASLM 322 (487)
Q Consensus 311 ~~~L~~la~~L~ 322 (487)
......+...+.
T Consensus 108 ~~~~~~l~~~~r 119 (156)
T COG0783 108 VEDYEYLIKELR 119 (156)
T ss_pred HHHHHHHHHHHH
Confidence 555554444433
Done!