Query 011381
Match_columns 487
No_of_seqs 133 out of 1376
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 06:57:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011381.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011381hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 6.1E-67 2.1E-71 528.9 36.2 432 10-480 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 8E-65 2.7E-69 521.7 42.5 463 10-481 5-469 (480)
3 2acv_A Triterpene UDP-glucosyl 100.0 1.8E-60 6.2E-65 487.5 33.8 443 10-481 8-463 (463)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.1E-59 3.6E-64 485.1 34.5 438 10-482 7-480 (482)
5 2c1x_A UDP-glucose flavonoid 3 100.0 2.6E-59 9E-64 477.7 35.2 433 10-482 6-453 (456)
6 4amg_A Snogd; transferase, pol 100.0 3.4E-44 1.2E-48 361.6 27.3 349 9-460 20-384 (400)
7 2iya_A OLEI, oleandomycin glyc 100.0 3.3E-43 1.1E-47 357.4 32.6 401 6-479 7-420 (424)
8 1iir_A Glycosyltransferase GTF 100.0 9.8E-41 3.4E-45 338.1 28.8 369 12-479 1-399 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 5.5E-40 1.9E-44 332.8 26.7 375 12-481 1-401 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 5.5E-39 1.9E-43 325.2 29.4 383 8-480 17-413 (415)
11 2yjn_A ERYCIII, glycosyltransf 100.0 1.6E-38 5.4E-43 324.5 28.9 379 9-481 18-436 (441)
12 3h4t_A Glycosyltransferase GTF 100.0 2.4E-39 8.4E-44 326.5 21.9 362 12-483 1-385 (404)
13 3ia7_A CALG4; glycosysltransfe 100.0 2.4E-37 8.4E-42 311.5 31.9 378 11-480 4-398 (402)
14 2p6p_A Glycosyl transferase; X 100.0 6E-37 2E-41 307.1 28.8 358 12-479 1-378 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 8.9E-36 3E-40 303.1 30.6 378 11-480 7-399 (430)
16 4fzr_A SSFS6; structural genom 100.0 2.1E-36 7.3E-41 304.6 24.5 360 5-475 9-395 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 3.5E-35 1.2E-39 295.7 27.1 352 9-477 18-394 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.9E-33 6.4E-38 282.3 28.2 355 11-477 1-385 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.3E-31 1.5E-35 266.8 31.8 366 7-480 16-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 8E-27 2.7E-31 231.4 27.6 340 12-479 3-355 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 5.2E-27 1.8E-31 207.1 12.4 161 266-459 8-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.2E-18 4E-23 172.5 26.4 339 12-483 7-358 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 1.2E-15 4.2E-20 138.1 7.3 136 277-438 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 1.1E-12 3.6E-17 123.8 17.1 117 279-421 157-275 (282)
25 3okp_A GDP-mannose-dependent a 99.3 3.7E-10 1.3E-14 112.2 24.8 350 10-485 3-382 (394)
26 3c48_A Predicted glycosyltrans 99.3 9.6E-10 3.3E-14 111.0 25.8 95 351-457 306-408 (438)
27 1v4v_A UDP-N-acetylglucosamine 99.2 6.1E-10 2.1E-14 110.2 20.1 108 351-479 255-365 (376)
28 1vgv_A UDP-N-acetylglucosamine 99.2 1.6E-10 5.3E-15 114.7 12.6 161 278-479 204-373 (384)
29 3fro_A GLGA glycogen synthase; 99.1 8.9E-09 3E-13 103.6 24.2 112 351-483 311-431 (439)
30 3ot5_A UDP-N-acetylglucosamine 99.1 4.1E-10 1.4E-14 112.5 13.7 110 351-481 282-394 (403)
31 3dzc_A UDP-N-acetylglucosamine 99.1 6.7E-10 2.3E-14 110.8 15.0 104 351-475 288-394 (396)
32 2gek_A Phosphatidylinositol ma 99.1 4.6E-09 1.6E-13 104.7 20.9 112 350-480 262-381 (406)
33 2r60_A Glycosyl transferase, g 99.1 9.6E-09 3.3E-13 105.7 23.4 79 351-441 335-424 (499)
34 2jjm_A Glycosyl transferase, g 99.1 1E-07 3.5E-12 94.6 29.5 114 351-483 267-386 (394)
35 3beo_A UDP-N-acetylglucosamine 99.0 3.3E-09 1.1E-13 104.7 13.7 108 351-479 263-373 (375)
36 2iw1_A Lipopolysaccharide core 98.9 6.3E-07 2.2E-11 88.0 27.2 129 279-441 195-337 (374)
37 2iuy_A Avigt4, glycosyltransfe 98.8 7.6E-08 2.6E-12 93.7 16.6 126 282-440 164-307 (342)
38 4hwg_A UDP-N-acetylglucosamine 98.8 4E-09 1.4E-13 104.5 6.4 160 279-479 203-374 (385)
39 2x6q_A Trehalose-synthase TRET 98.7 5.6E-06 1.9E-10 82.7 25.9 110 351-481 293-413 (416)
40 3s28_A Sucrose synthase 1; gly 98.6 1.2E-06 4.1E-11 94.2 19.2 77 351-439 640-728 (816)
41 2qzs_A Glycogen synthase; glyc 98.4 1.4E-05 4.6E-10 81.6 20.3 112 351-483 347-477 (485)
42 1rzu_A Glycogen synthase 1; gl 98.4 2.8E-05 9.6E-10 79.2 22.0 109 351-481 346-474 (485)
43 3oy2_A Glycosyltransferase B73 98.3 9.7E-05 3.3E-09 73.4 23.0 110 353-481 256-389 (413)
44 2f9f_A First mannosyl transfer 98.2 3.2E-06 1.1E-10 73.8 9.1 129 281-442 24-163 (177)
45 2hy7_A Glucuronosyltransferase 98.2 0.00023 7.8E-09 70.8 23.3 74 351-442 265-353 (406)
46 2vsy_A XCC0866; transferase, g 98.1 0.00061 2.1E-08 70.8 25.5 117 351-480 434-557 (568)
47 2xci_A KDO-transferase, 3-deox 98.0 0.00071 2.4E-08 66.4 22.2 97 352-459 261-364 (374)
48 3qhp_A Type 1 capsular polysac 97.5 0.00093 3.2E-08 56.9 11.4 126 280-441 2-140 (166)
49 2bfw_A GLGA glycogen synthase; 97.2 0.0024 8.1E-08 56.2 10.6 77 352-441 96-181 (200)
50 4gyw_A UDP-N-acetylglucosamine 96.9 0.0065 2.2E-07 64.9 12.3 150 277-459 520-684 (723)
51 3q3e_A HMW1C-like glycosyltran 96.8 0.0072 2.5E-07 62.2 11.4 145 279-451 440-595 (631)
52 3rhz_A GTF3, nucleotide sugar 96.8 0.0019 6.4E-08 62.4 6.7 111 352-479 215-337 (339)
53 3tov_A Glycosyl transferase fa 96.6 0.071 2.4E-06 51.4 16.9 107 10-145 7-116 (349)
54 1psw_A ADP-heptose LPS heptosy 96.3 0.24 8.1E-06 47.4 18.4 105 12-145 1-107 (348)
55 2x0d_A WSAF; GT4 family, trans 95.3 0.013 4.5E-07 58.1 4.9 83 352-450 296-385 (413)
56 3vue_A GBSS-I, granule-bound s 91.8 0.54 1.8E-05 48.1 9.3 167 281-482 328-511 (536)
57 3vue_A GBSS-I, granule-bound s 83.4 1.3 4.4E-05 45.3 5.7 41 9-50 7-53 (536)
58 2gt1_A Lipopolysaccharide hept 83.1 0.38 1.3E-05 45.6 1.5 40 12-51 1-41 (326)
59 2x0d_A WSAF; GT4 family, trans 81.5 0.77 2.6E-05 45.2 3.1 42 8-50 43-89 (413)
60 3dfz_A SIRC, precorrin-2 dehyd 79.0 11 0.00037 33.4 9.4 155 272-461 26-186 (223)
61 1uqt_A Alpha, alpha-trehalose- 77.0 10 0.00035 37.9 9.8 107 355-482 336-454 (482)
62 4dzz_A Plasmid partitioning pr 73.7 21 0.00072 30.4 9.9 37 14-51 4-41 (206)
63 2iz6_A Molybdenum cofactor car 72.0 25 0.00086 29.7 9.5 45 354-398 92-140 (176)
64 1g5t_A COB(I)alamin adenosyltr 70.4 39 0.0013 29.0 10.5 104 11-129 28-131 (196)
65 3t5t_A Putative glycosyltransf 68.9 15 0.00051 36.8 8.5 109 352-481 353-472 (496)
66 3nb0_A Glycogen [starch] synth 66.1 14 0.00049 38.5 7.8 44 354-399 496-552 (725)
67 3zqu_A Probable aromatic acid 64.9 7.5 0.00026 34.0 4.8 39 9-49 2-40 (209)
68 3rg8_A Phosphoribosylaminoimid 64.3 42 0.0014 27.7 8.9 138 280-460 3-148 (159)
69 4b4k_A N5-carboxyaminoimidazol 63.2 58 0.002 27.4 9.6 140 279-462 22-174 (181)
70 1xmp_A PURE, phosphoribosylami 62.1 43 0.0015 27.9 8.5 143 279-464 11-165 (170)
71 3fgn_A Dethiobiotin synthetase 61.2 41 0.0014 30.2 9.3 37 11-48 25-63 (251)
72 3oow_A Phosphoribosylaminoimid 59.6 75 0.0026 26.3 9.9 145 279-464 5-159 (166)
73 3auf_A Glycinamide ribonucleot 59.6 60 0.002 28.6 9.8 38 9-49 20-58 (229)
74 2r8r_A Sensor protein; KDPD, P 58.9 14 0.00047 32.8 5.4 43 7-50 2-44 (228)
75 3qxc_A Dethiobiotin synthetase 58.7 25 0.00084 31.5 7.3 37 11-48 20-58 (242)
76 2q6t_A DNAB replication FORK h 55.7 25 0.00087 34.5 7.5 39 13-51 202-240 (444)
77 3kuu_A Phosphoribosylaminoimid 54.9 70 0.0024 26.7 8.7 143 279-464 12-166 (174)
78 3vot_A L-amino acid ligase, BL 52.2 46 0.0016 32.2 8.7 33 110-142 67-101 (425)
79 3qvl_A Putative hydantoin race 51.0 1.1E+02 0.0037 27.2 10.2 37 12-49 2-39 (245)
80 2vqe_B 30S ribosomal protein S 50.9 82 0.0028 28.3 9.2 32 117-148 157-190 (256)
81 2ywr_A Phosphoribosylglycinami 50.5 57 0.0019 28.4 8.1 108 11-148 1-111 (216)
82 1yt5_A Inorganic polyphosphate 50.0 10 0.00035 34.4 3.2 54 366-441 40-96 (258)
83 3ty2_A 5'-nucleotidase SURE; s 49.7 25 0.00084 31.8 5.6 40 9-51 9-48 (261)
84 4grd_A N5-CAIR mutase, phospho 49.4 65 0.0022 26.9 7.6 142 278-462 11-164 (173)
85 3kcq_A Phosphoribosylglycinami 49.2 44 0.0015 29.2 7.1 40 7-49 4-44 (215)
86 1u11_A PURE (N5-carboxyaminoim 49.0 1.1E+02 0.0036 25.8 8.9 144 279-466 21-177 (182)
87 3bbn_B Ribosomal protein S2; s 47.5 64 0.0022 28.5 7.8 30 118-147 157-188 (231)
88 2yxb_A Coenzyme B12-dependent 47.3 43 0.0015 27.7 6.5 39 10-49 17-55 (161)
89 1kyq_A Met8P, siroheme biosynt 47.3 1.6E+02 0.0056 26.6 11.4 89 367-462 106-211 (274)
90 4a1f_A DNAB helicase, replicat 46.5 22 0.00076 33.6 5.1 38 13-51 48-85 (338)
91 3bgw_A DNAB-like replicative h 46.1 34 0.0011 33.7 6.6 38 13-51 199-236 (444)
92 3mc3_A DSRE/DSRF-like family p 45.6 27 0.00094 27.8 4.9 37 12-49 16-55 (134)
93 1ccw_A Protein (glutamate muta 45.2 30 0.001 27.7 5.1 38 11-49 3-40 (137)
94 3lp6_A Phosphoribosylaminoimid 45.2 89 0.003 26.1 7.8 140 279-461 7-156 (174)
95 3l7i_A Teichoic acid biosynthe 44.6 20 0.00068 37.9 4.9 117 355-484 603-723 (729)
96 3lqk_A Dipicolinate synthase s 44.1 30 0.001 29.9 5.2 39 11-51 7-46 (201)
97 3ors_A N5-carboxyaminoimidazol 44.0 1.3E+02 0.0045 24.8 8.6 138 279-461 3-154 (163)
98 3av3_A Phosphoribosylglycinami 43.6 1.4E+02 0.0047 25.9 9.4 35 12-49 4-39 (212)
99 1eiw_A Hypothetical protein MT 43.0 32 0.0011 26.5 4.6 65 365-440 36-109 (111)
100 2l82_A Designed protein OR32; 43.0 50 0.0017 24.9 5.4 34 281-318 3-36 (162)
101 1jkx_A GART;, phosphoribosylgl 42.9 1.6E+02 0.0056 25.4 10.2 35 12-49 1-36 (212)
102 1y80_A Predicted cobalamin bin 42.7 58 0.002 28.1 6.9 39 10-49 87-125 (210)
103 2ywx_A Phosphoribosylaminoimid 42.4 1.4E+02 0.0046 24.5 8.4 136 282-460 2-143 (157)
104 1sbz_A Probable aromatic acid 42.2 31 0.0011 29.7 4.9 36 12-49 1-37 (197)
105 2i2x_B MTAC, methyltransferase 41.9 38 0.0013 30.5 5.8 39 10-49 122-160 (258)
106 3ezx_A MMCP 1, monomethylamine 41.5 86 0.003 27.2 7.9 40 9-49 90-129 (215)
107 3igf_A ALL4481 protein; two-do 41.4 53 0.0018 31.4 7.0 36 12-48 2-38 (374)
108 3da8_A Probable 5'-phosphoribo 40.5 1.3E+02 0.0044 26.2 8.7 39 9-50 10-48 (215)
109 3trh_A Phosphoribosylaminoimid 39.7 1.3E+02 0.0043 25.0 7.9 142 279-460 6-156 (169)
110 3qjg_A Epidermin biosynthesis 39.6 34 0.0012 28.8 4.7 38 12-51 6-43 (175)
111 1pjq_A CYSG, siroheme synthase 39.3 1.4E+02 0.0049 29.2 10.0 92 363-462 68-169 (457)
112 3bh0_A DNAB-like replicative h 39.2 63 0.0022 29.9 7.0 38 13-51 70-107 (315)
113 3kcq_A Phosphoribosylglycinami 38.9 1.7E+02 0.0059 25.3 9.3 114 298-454 72-187 (215)
114 2g1u_A Hypothetical protein TM 38.6 32 0.0011 27.9 4.4 37 7-49 15-51 (155)
115 3nrb_A Formyltetrahydrofolate 38.5 1.6E+02 0.0054 26.9 9.4 104 297-439 154-259 (287)
116 4dim_A Phosphoribosylglycinami 38.3 2.6E+02 0.0089 26.4 11.6 34 10-49 6-39 (403)
117 3o1l_A Formyltetrahydrofolate 37.1 2.1E+02 0.0072 26.3 10.0 107 294-439 167-275 (302)
118 3mcu_A Dipicolinate synthase, 36.7 32 0.0011 29.9 4.1 39 11-51 5-44 (207)
119 1q57_A DNA primase/helicase; d 36.5 1.9E+02 0.0066 28.5 10.6 39 13-51 244-282 (503)
120 3tqr_A Phosphoribosylglycinami 36.4 1.9E+02 0.0064 25.1 9.1 115 297-454 72-188 (215)
121 1lss_A TRK system potassium up 36.1 28 0.00095 27.3 3.5 34 10-49 3-36 (140)
122 3obi_A Formyltetrahydrofolate 35.9 1.7E+02 0.0057 26.7 9.1 104 297-439 155-260 (288)
123 1mvl_A PPC decarboxylase athal 35.9 40 0.0014 29.3 4.7 38 11-51 19-56 (209)
124 3tqr_A Phosphoribosylglycinami 35.7 1.1E+02 0.0037 26.6 7.4 37 10-49 4-40 (215)
125 2i2c_A Probable inorganic poly 35.6 15 0.00051 33.6 1.9 53 367-441 35-93 (272)
126 2r6a_A DNAB helicase, replicat 35.6 68 0.0023 31.5 7.0 40 12-51 204-243 (454)
127 3da8_A Probable 5'-phosphoribo 34.2 2.3E+02 0.0079 24.5 10.8 116 297-455 78-195 (215)
128 3n0v_A Formyltetrahydrofolate 33.9 2E+02 0.0069 26.2 9.3 104 297-439 155-260 (286)
129 3lou_A Formyltetrahydrofolate 33.8 1.9E+02 0.0064 26.5 9.1 104 297-439 160-265 (292)
130 3lrx_A Putative hydrogenase; a 33.1 40 0.0014 27.6 4.1 34 12-49 24-57 (158)
131 4ds3_A Phosphoribosylglycinami 32.5 2.4E+02 0.0082 24.3 9.8 115 297-454 75-191 (209)
132 3o1l_A Formyltetrahydrofolate 31.8 3E+02 0.01 25.2 10.1 38 9-49 103-141 (302)
133 1u0t_A Inorganic polyphosphate 31.6 19 0.00065 33.5 2.0 32 364-397 72-107 (307)
134 3tl4_X Glutaminyl-tRNA synthet 31.5 59 0.002 27.7 4.8 71 405-485 105-183 (187)
135 4dll_A 2-hydroxy-3-oxopropiona 31.3 52 0.0018 30.6 5.0 35 9-49 29-63 (320)
136 4b4o_A Epimerase family protei 31.1 34 0.0012 31.1 3.7 32 12-48 1-32 (298)
137 3eag_A UDP-N-acetylmuramate:L- 31.0 47 0.0016 31.0 4.7 34 9-47 2-35 (326)
138 3pdi_A Nitrogenase MOFE cofact 31.0 2.8E+02 0.0095 27.4 10.5 25 117-144 400-424 (483)
139 3dfu_A Uncharacterized protein 30.8 35 0.0012 30.3 3.4 34 9-48 4-37 (232)
140 2h31_A Multifunctional protein 30.4 3E+02 0.01 26.6 10.2 137 279-460 265-411 (425)
141 2ejb_A Probable aromatic acid 30.0 70 0.0024 27.2 5.2 35 13-49 3-37 (189)
142 3auf_A Glycinamide ribonucleot 30.0 2.8E+02 0.0095 24.2 9.8 102 298-438 91-194 (229)
143 2an1_A Putative kinase; struct 29.6 23 0.0008 32.5 2.2 29 367-397 63-95 (292)
144 1id1_A Putative potassium chan 29.5 33 0.0011 27.7 2.9 32 12-49 4-35 (153)
145 3kjh_A CO dehydrogenase/acetyl 29.0 37 0.0013 29.8 3.4 38 12-50 1-38 (254)
146 1jkx_A GART;, phosphoribosylgl 28.7 2.8E+02 0.0096 23.8 9.7 114 298-454 69-184 (212)
147 4hb9_A Similarities with proba 28.6 36 0.0012 32.4 3.5 29 12-46 2-30 (412)
148 1o4v_A Phosphoribosylaminoimid 27.8 2.7E+02 0.0093 23.4 11.9 139 279-462 13-163 (183)
149 1v5e_A Pyruvate oxidase; oxido 27.7 1.7E+02 0.0056 29.8 8.5 27 370-396 69-101 (590)
150 1o97_C Electron transferring f 27.2 63 0.0022 29.2 4.6 30 118-147 112-147 (264)
151 3lou_A Formyltetrahydrofolate 26.8 3.6E+02 0.012 24.5 10.3 105 9-145 93-199 (292)
152 1ydh_A AT5G11950; structural g 26.7 80 0.0027 27.5 5.0 108 274-395 4-141 (216)
153 1efv_B Electron transfer flavo 26.7 62 0.0021 29.1 4.4 31 117-147 115-151 (255)
154 3mjf_A Phosphoribosylamine--gl 26.6 1.1E+02 0.0037 29.7 6.6 32 11-48 3-35 (431)
155 3s2u_A UDP-N-acetylglucosamine 26.6 67 0.0023 30.4 5.0 27 367-395 92-121 (365)
156 1meo_A Phosophoribosylglycinam 26.4 2.9E+02 0.0098 23.7 8.6 35 13-50 2-37 (209)
157 1p3y_1 MRSD protein; flavoprot 25.9 44 0.0015 28.7 3.1 37 11-49 8-44 (194)
158 1meo_A Phosophoribosylglycinam 25.9 3.1E+02 0.011 23.5 11.0 114 298-454 69-184 (209)
159 2zts_A Putative uncharacterize 25.9 1.3E+02 0.0044 26.0 6.5 39 13-51 32-70 (251)
160 1z82_A Glycerol-3-phosphate de 25.8 47 0.0016 31.0 3.6 33 11-49 14-46 (335)
161 3u7q_B Nitrogenase molybdenum- 25.6 5.1E+02 0.017 25.8 12.0 33 12-50 365-397 (523)
162 4g6h_A Rotenone-insensitive NA 25.4 43 0.0015 33.5 3.4 37 8-50 39-75 (502)
163 3p9x_A Phosphoribosylglycinami 25.2 3.3E+02 0.011 23.4 9.8 103 297-438 70-174 (211)
164 2hy5_A Putative sulfurtransfer 25.2 1.2E+02 0.0041 23.6 5.5 34 15-49 5-41 (130)
165 1efp_B ETF, protein (electron 24.8 62 0.0021 29.0 4.0 30 118-147 113-148 (252)
166 3rfo_A Methionyl-tRNA formyltr 24.6 84 0.0029 29.2 5.0 38 8-51 1-38 (317)
167 1qzu_A Hypothetical protein MD 24.5 62 0.0021 28.0 3.8 40 11-51 19-58 (206)
168 3av3_A Phosphoribosylglycinami 24.4 3.4E+02 0.011 23.3 10.1 114 298-454 72-187 (212)
169 3doj_A AT3G25530, dehydrogenas 24.1 62 0.0021 29.8 4.1 36 8-49 18-53 (310)
170 1qkk_A DCTD, C4-dicarboxylate 24.0 1.7E+02 0.0057 22.9 6.4 48 388-441 74-121 (155)
171 3i83_A 2-dehydropantoate 2-red 23.8 52 0.0018 30.5 3.5 32 12-49 3-34 (320)
172 3fwz_A Inner membrane protein 23.7 46 0.0016 26.4 2.7 33 11-49 7-39 (140)
173 3aek_B Light-independent proto 23.6 4.2E+02 0.014 26.4 10.4 24 118-144 349-372 (525)
174 3qha_A Putative oxidoreductase 23.3 41 0.0014 30.8 2.7 34 10-49 14-47 (296)
175 3hn2_A 2-dehydropantoate 2-red 23.0 59 0.002 30.0 3.7 32 12-49 3-34 (312)
176 3s40_A Diacylglycerol kinase; 23.0 82 0.0028 29.0 4.7 27 372-398 66-98 (304)
177 2gt1_A Lipopolysaccharide hept 22.9 67 0.0023 29.6 4.1 131 279-441 178-322 (326)
178 4e5s_A MCCFLIKE protein (BA_56 22.8 85 0.0029 29.4 4.7 73 292-397 62-136 (331)
179 2ew2_A 2-dehydropantoate 2-red 22.7 56 0.0019 29.8 3.5 32 11-48 3-34 (316)
180 1kjn_A MTH0777; hypotethical p 22.7 66 0.0023 26.2 3.3 38 11-49 6-45 (157)
181 3hwr_A 2-dehydropantoate 2-red 22.4 58 0.002 30.2 3.5 31 10-46 18-48 (318)
182 3rp8_A Flavoprotein monooxygen 22.3 58 0.002 31.2 3.6 35 7-47 19-53 (407)
183 3cky_A 2-hydroxymethyl glutara 22.0 88 0.003 28.4 4.7 33 10-48 3-35 (301)
184 2xws_A Sirohydrochlorin cobalt 21.8 2E+02 0.0067 22.3 6.2 29 279-307 4-32 (133)
185 2lnd_A De novo designed protei 21.7 63 0.0022 22.9 2.6 49 387-440 49-100 (112)
186 1ks9_A KPA reductase;, 2-dehyd 21.2 64 0.0022 29.0 3.5 32 12-49 1-32 (291)
187 3llv_A Exopolyphosphatase-rela 20.6 56 0.0019 25.7 2.6 33 11-49 6-38 (141)
188 3r6d_A NAD-dependent epimerase 20.5 1E+02 0.0035 26.3 4.5 34 11-48 4-38 (221)
189 1g63_A Epidermin modifying enz 20.3 77 0.0026 26.7 3.5 37 13-51 4-40 (181)
190 3m1a_A Putative dehydrogenase; 20.3 2.1E+02 0.0073 25.3 6.9 33 13-49 6-38 (281)
191 3qrx_B Melittin; calcium-bindi 20.3 29 0.00099 18.4 0.5 17 378-394 1-17 (26)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=6.1e-67 Score=528.93 Aligned_cols=432 Identities=25% Similarity=0.372 Sum_probs=343.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCC--CEEEEEecCCCCCCCCchhHHHHHhhcC---CCCceEEeCCCCCCCC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYN--FLVTIFIPTIDDGTGSSIQTIRQVLESL---PTSISTIFLPPVSFDD 84 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~G--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 84 (487)
++.||+++|+|++||++|++.||+.|+++ | +.|||++++.+ ..++.... ..+++|..++....++
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~-g~~~~vT~~~t~~~---------~~~~~~~~~~~~~~i~~~~ipdglp~~ 81 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTTT---------NDTLFSRSNEFLPNIKYYNVHDGLPKG 81 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHH---------HHHSCSSSSCCCTTEEEEECCCCCCTT
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhC-CCCEEEEEEeCHHH---------HHhhhcccccCCCCceEEecCCCCCCC
Confidence 46799999999999999999999999886 9 99999998744 33332221 2468999887421111
Q ss_pred CCCCcchHHHHHHHHHHhHHHHHHHHHHHhcc--CCceEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHhccccc
Q 011381 85 LPDDFQIETRITLTLVRSLSSLRDALKVLAES--TRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTAMALSFLFHLPEL 162 (487)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 162 (487)
..........+...+....+.+++.++++.++ .++|+||+|.++.|+..+|+++|||++.+++++++.++.+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 82 YVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 11111111222223333345566666665432 4799999999999999999999999999999999998888876654
Q ss_pred ccccccccCCCCCcc-cCCCCcccCCCCCCCccc-ccchhHHHHHHHHHHhhhcccEEEecccccccchHHHHhhcccCC
Q 011381 163 DVKFSCEYRDMPEPV-QLPGCVPVHGRDFADGFQ-QRKNEAYRFLLSFSKQYLLAAGIMVNSFMELETGPFKALMEGESS 240 (487)
Q Consensus 163 ~~~~~~~~~~~~~~~-~~p~~~~~~~~~l~~~~~-~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~ 240 (487)
.+...........++ .+|+++++...+++..+. +.....++.+.+..+....++++++||++++|.++.+.+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~--- 238 (454)
T 3hbf_A 162 REKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK--- 238 (454)
T ss_dssp HHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT---
T ss_pred HhhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc---
Confidence 432110000011233 368888888888887764 333445566667777788899999999999999998888763
Q ss_pred CCCCCeEeeCcCcCCCCCC-CCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCC
Q 011381 241 FKPPPVYPVGPLIQTGSNN-ETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPH 319 (487)
Q Consensus 241 ~~~p~~~~vGpl~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 319 (487)
.|++++|||++...... ... +.++.+||+.++++++|||||||+...+.+++.+++.+|++++++|||+++...
T Consensus 239 --~~~v~~vGPl~~~~~~~~~~~---~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~ 313 (454)
T 3hbf_A 239 --FKLLLNVGPFNLTTPQRKVSD---EHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP 313 (454)
T ss_dssp --SSCEEECCCHHHHSCCSCCCC---TTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH
T ss_pred --CCCEEEECCcccccccccccc---hHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc
Confidence 36899999997643322 111 568999999988899999999999888899999999999999999999998753
Q ss_pred ccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCceecccccc
Q 011381 320 EEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYS 399 (487)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~ 399 (487)
. ..+|++|.++.+ .|+++++|+||.++|+|++|++||||||+||++||+++|||||++|+++
T Consensus 314 ~-----------------~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~ 375 (454)
T 3hbf_A 314 K-----------------EKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFG 375 (454)
T ss_dssp H-----------------HHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred h-----------------hcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccc
Confidence 2 347888887765 5677779999999999999999999999999999999999999999999
Q ss_pred cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Q 011381 400 EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIW 479 (487)
Q Consensus 400 DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 479 (487)
||+.||+++++.+|+|+.+...+ +++++|.++|+++|+++++++||+||+++++.+++++++|||+++++++|++++
T Consensus 376 DQ~~Na~~v~~~~g~Gv~l~~~~---~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i 452 (454)
T 3hbf_A 376 DQGLNTILTESVLEIGVGVDNGV---LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIV 452 (454)
T ss_dssp THHHHHHHHHTTSCSEEECGGGS---CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhCeeEEecCCC---CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHH
Confidence 99999999998449999998766 999999999999999866779999999999999999999999999999999987
Q ss_pred h
Q 011381 480 K 480 (487)
Q Consensus 480 ~ 480 (487)
.
T Consensus 453 ~ 453 (454)
T 3hbf_A 453 T 453 (454)
T ss_dssp T
T ss_pred h
Confidence 5
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=8e-65 Score=521.73 Aligned_cols=463 Identities=57% Similarity=0.969 Sum_probs=342.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCCCCc
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLPDDF 89 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (487)
+++||+++|+|++||++|++.||++|++++||+|||++++.++ . .. ....+......++.|..++.....+.....
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~-~-~~--~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGP-P-SK--AQRTVLDSLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSS-C-C---CHHHHHC-CCTTEEEEECCCCCCTTSCTTC
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcc-h-hh--hhhhhccccCCCceEEEcCCCCCCCCCCch
Confidence 4679999999999999999999999976339999999988631 0 01 111111111347899998864322211111
Q ss_pred chHHHHHHHHHHhHHHHHHHHHHHhccCCc-eEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHhccccccccccc
Q 011381 90 QIETRITLTLVRSLSSLRDALKVLAESTRL-VALVVDPFGSAAFDVANEVGVPAYVFFTTTAMALSFLFHLPELDVKFSC 168 (487)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (487)
.....+........+.+++.++++....++ |+||+|.++.|+..+|+++|||++.+++++++..+.+.|++.+.+....
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 222223233334455666776665333578 9999999999999999999999999999988877766665543322111
Q ss_pred ccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHhhhcccEEEecccccccchHHHHhhcccCCCCCCCeEe
Q 011381 169 EYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQYLLAAGIMVNSFMELETGPFKALMEGESSFKPPPVYP 248 (487)
Q Consensus 169 ~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~~~~ 248 (487)
+..+...+...|+++++...+++..++++....+..+.+....+....+++.|++.+++..++..+.+..+. .|++++
T Consensus 161 ~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~--~~~v~~ 238 (480)
T 2vch_A 161 EFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLD--KPPVYP 238 (480)
T ss_dssp CGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTT--CCCEEE
T ss_pred cccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccC--CCcEEE
Confidence 111111123347777777677776665554455555556666677788999999999999988888873222 258999
Q ss_pred eCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccc
Q 011381 249 VGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYF 328 (487)
Q Consensus 249 vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 328 (487)
|||++....... .+..+.++.+||++++++++|||||||+...+.+++.+++++|+.++++|||+++..... ....++
T Consensus 239 vGpl~~~~~~~~-~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~-~~~~~~ 316 (480)
T 2vch_A 239 VGPLVNIGKQEA-KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI-ANSSYF 316 (480)
T ss_dssp CCCCCCCSCSCC------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS-TTTTTT
T ss_pred Eecccccccccc-CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccc-cccccc
Confidence 999986542210 011257889999998778999999999988889999999999999999999999874310 000000
Q ss_pred cccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhh
Q 011381 329 SVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLL 408 (487)
Q Consensus 329 ~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v 408 (487)
..+++.+....+|++|.+++++.++++.+|+||.+||+|++|++||||||+||++||+++|||||++|+++||+.||+++
T Consensus 317 ~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l 396 (480)
T 2vch_A 317 DSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLL 396 (480)
T ss_dssp CC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH
T ss_pred ccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHH
Confidence 00000011135899999999888888888999999999999999999999999999999999999999999999999997
Q ss_pred -hcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhc
Q 011381 409 -TDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKN 481 (487)
Q Consensus 409 -~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 481 (487)
++ +|+|+.+...+++.+++++|+++|+++|+++++++||+||+++++++++++.+||++..++++|++.+++
T Consensus 397 ~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 397 SED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 67 9999999775333499999999999999966668999999999999999999999999999999999865
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.8e-60 Score=487.49 Aligned_cols=443 Identities=34% Similarity=0.587 Sum_probs=329.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcC-CCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCCCC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQY-NFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLPDD 88 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (487)
+++||+++|+|++||++|++.||++|++++ ||+|||++++.++..... .....+ .....++.|..+|.....+....
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~-~~~~~~-~~~~~~i~~~~lp~~~~~~~~~~ 85 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFAD-SYIKSV-LASQPQIQLIDLPEVEPPPQELL 85 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCH-HHHHHH-HCSCTTEEEEECCCCCCCCGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhh-hhhhhc-ccCCCCceEEECCCCCCCccccc
Confidence 467999999999999999999999997643 999999998865211000 011111 12234799999986432111000
Q ss_pred cchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHhccccccccccc
Q 011381 89 FQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTAMALSFLFHLPELDVKFSC 168 (487)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (487)
......+...+....+.+++.++++ ...+||+||+|.++.|+..+|+++|||+++++++++...+.+.+++.+... .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~--~ 162 (463)
T 2acv_A 86 KSPEFYILTFLESLIPHVKATIKTI-LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE--E 162 (463)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHH-CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT--C
T ss_pred CCccHHHHHHHHhhhHHHHHHHHhc-cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc--C
Confidence 1111113333334455666666654 336899999999999999999999999999999988877776666544211 1
Q ss_pred ccCCCCC---cccCCCC-cccCCCCCCCcccccchhHHHHHHHHHHhhhcccEEEecccccccchHHHHhhcccCCCCCC
Q 011381 169 EYRDMPE---PVQLPGC-VPVHGRDFADGFQQRKNEAYRFLLSFSKQYLLAAGIMVNSFMELETGPFKALMEGESSFKPP 244 (487)
Q Consensus 169 ~~~~~~~---~~~~p~~-~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p 244 (487)
...+... +..+|++ +++...+++..++++ .+.+..+......+...+++++++++++|..+.+++.+... +.|
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~--p~~ 239 (463)
T 2acv_A 163 VFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDE--KIP 239 (463)
T ss_dssp CCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCT--TSC
T ss_pred CCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccc--cCC
Confidence 1111111 3345777 666666666555554 44555555566667788899999999999999888877432 136
Q ss_pred CeEeeCcCcCCCC-CC-CCCCCCccchhhcccCCCCCeEEEEEeCCCc-CCCHHHHHHHHHHHHHcCCceEEEEeCCCcc
Q 011381 245 PVYPVGPLIQTGS-NN-ETNNDRSLECLKWLDEQPSESVLFVCFGSGG-TLSQEQLNELALGLEMSGQRFLWVAKSPHEE 321 (487)
Q Consensus 245 ~~~~vGpl~~~~~-~~-~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 321 (487)
++++|||++.... .. ...+..+.++.+||+.++++++|||||||+. ..+.+++.+++++|++.+++|||+++...
T Consensus 240 ~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~-- 317 (463)
T 2acv_A 240 PIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK-- 317 (463)
T ss_dssp CEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG--
T ss_pred cEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCc--
Confidence 8999999986542 10 1000114678999999888899999999998 78888899999999999999999998631
Q ss_pred ccccccccccCCCCCCCCCchhHHHhhc-CCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCceeccccccc
Q 011381 322 AANATYFSVQSMKDPLDFLPKGFLDRTK-GVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSE 400 (487)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~D 400 (487)
..+|+++.+++. ..++++++|+||.++|+|+++++||||||+||++||+++|||||++|++.|
T Consensus 318 ----------------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~d 381 (463)
T 2acv_A 318 ----------------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAE 381 (463)
T ss_dssp ----------------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred ----------------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhh
Confidence 126777776651 246778889999999999999999999999999999999999999999999
Q ss_pred chhhhHhh-hcccceeEEEe-ecCCC--ccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHH
Q 011381 401 QKMNAVLL-TDDLKVSFRVK-VNENG--LVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLA 476 (487)
Q Consensus 401 Q~~na~~v-~~~~G~G~~l~-~~~~~--~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 476 (487)
|+.||+++ ++ +|+|+.+. ..+++ .+++++|.++|+++|++ +++||+||+++++.+++++.+|||+++++++|+
T Consensus 382 Q~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v 458 (463)
T 2acv_A 382 QQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLI 458 (463)
T ss_dssp HHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHH
T ss_pred hHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 99999995 78 99999993 11111 38999999999999962 268999999999999999999999999999999
Q ss_pred HHHhc
Q 011381 477 RIWKN 481 (487)
Q Consensus 477 ~~l~~ 481 (487)
+++++
T Consensus 459 ~~~~~ 463 (463)
T 2acv_A 459 DDITG 463 (463)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 99853
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.1e-59 Score=485.10 Aligned_cols=438 Identities=27% Similarity=0.470 Sum_probs=316.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcC-------CCCceEEeCCCCCC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESL-------PTSISTIFLPPVSF 82 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 82 (487)
+++||+++|+|++||++|++.||++|++| ||+|||++++.+ ...+.... ..+++|..++.. .
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~r-G~~VT~v~t~~~---------~~~~~~~~~~~~~~~~~~i~~~~l~~~-l 75 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEYN---------HKRLLKSRGPKAFDGFTDFNFESIPDG-L 75 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEEHHH---------HHHHC------------CEEEEEECCC-C
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhC-CCeEEEEeCCch---------hhhhccccccccccCCCceEEEECCCC-C
Confidence 46799999999999999999999999876 999999998744 22222210 026888888731 1
Q ss_pred CCCC---CCcchHHHHHHHH-HHhHHHHHHHHHHHhc---cCCceEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHH
Q 011381 83 DDLP---DDFQIETRITLTL-VRSLSSLRDALKVLAE---STRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTAMALSF 155 (487)
Q Consensus 83 ~~~~---~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~---~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 155 (487)
+... ........+...+ ....+.++++++++.. ..+||+||+|.++.|+..+|+++|||++.++++++.....
T Consensus 76 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 155 (482)
T 2pq6_A 76 TPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLN 155 (482)
T ss_dssp C---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred CCcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHH
Confidence 1100 0011111222222 2234556666666532 2589999999999999999999999999999998876655
Q ss_pred Hhccccccc--ccccccC-----C-CCCcc-cCCCCcccCCCCCCCccccc--chhHHHHHHHHHHhhhcccEEEecccc
Q 011381 156 LFHLPELDV--KFSCEYR-----D-MPEPV-QLPGCVPVHGRDFADGFQQR--KNEAYRFLLSFSKQYLLAAGIMVNSFM 224 (487)
Q Consensus 156 ~~~~~~~~~--~~~~~~~-----~-~~~~~-~~p~~~~~~~~~l~~~~~~r--~~~~~~~~~~~~~~~~~~~~~l~~s~~ 224 (487)
+.+++.... ..+.... . ..... .+|+++++...+++..+... .......+..........+++++|+++
T Consensus 156 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~ 235 (482)
T 2pq6_A 156 VMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFN 235 (482)
T ss_dssp HTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCG
T ss_pred HHHHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChH
Confidence 544332110 0000000 0 01111 13454444444444333211 122333333444556678899999999
Q ss_pred cccchHHHHhhcccCCCCCCCeEeeCcCcCC-CCC-------C--CCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCH
Q 011381 225 ELETGPFKALMEGESSFKPPPVYPVGPLIQT-GSN-------N--ETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQ 294 (487)
Q Consensus 225 ~le~~~~~~~~~~~~~~~~p~~~~vGpl~~~-~~~-------~--~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~ 294 (487)
++|+++.+.+.+. .|++++|||++.. ... . ...+..+.++.+||++++++++|||||||....+.
T Consensus 236 ~le~~~~~~~~~~-----~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~ 310 (482)
T 2pq6_A 236 ELESDVINALSST-----IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTP 310 (482)
T ss_dssp GGGHHHHHHHHTT-----CTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCH
T ss_pred HHhHHHHHHHHHh-----CCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCH
Confidence 9999988777763 2689999999763 111 0 01111245688999998778999999999987888
Q ss_pred HHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccc
Q 011381 295 EQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFL 374 (487)
Q Consensus 295 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I 374 (487)
+++.+++.+|++++++|||+++.... .+....+|+++.++++ .|+++++|+||.++|+|+++++||
T Consensus 311 ~~~~~~~~~l~~~~~~~l~~~~~~~~-------------~~~~~~l~~~~~~~~~-~~~~v~~~~pq~~~L~h~~~~~~v 376 (482)
T 2pq6_A 311 EQLLEFAWGLANCKKSFLWIIRPDLV-------------IGGSVIFSSEFTNEIA-DRGLIASWCPQDKVLNHPSIGGFL 376 (482)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCGGGS-------------TTTGGGSCHHHHHHHT-TTEEEESCCCHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHhcCCcEEEEEcCCcc-------------ccccccCcHhHHHhcC-CCEEEEeecCHHHHhcCCCCCEEE
Confidence 88999999999999999999986421 0111237888877764 588889999999999999999999
Q ss_pred cccCchhHHHHHhhCCceecccccccchhhhHhhh-cccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHH
Q 011381 375 SHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLT-DDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRA 453 (487)
Q Consensus 375 ~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~-~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~ 453 (487)
||||+||++||+++|||||++|++.||+.||++++ + +|+|+.+. .+ +++++|.++|+++|+|+++++||+||++
T Consensus 377 th~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~-~G~g~~l~-~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~ 451 (482)
T 2pq6_A 377 THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE-WEIGMEID-TN---VKREELAKLINEVIAGDKGKKMKQKAME 451 (482)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-SCCEEECC-SS---CCHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred ecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH-hCEEEEEC-CC---CCHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999997 7 99999998 55 9999999999999998555589999999
Q ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHhcC
Q 011381 454 LKDAAANALSPDGSSTKSLAQLARIWKNP 482 (487)
Q Consensus 454 l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 482 (487)
+++.+++++.+|||+.+++++|++.++..
T Consensus 452 l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 452 LKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998654
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.6e-59 Score=477.67 Aligned_cols=433 Identities=27% Similarity=0.442 Sum_probs=315.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCE--EEEEecCCCCCCCCchhHHHHHhhc-C---CCCceEEeCCCCCCC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFL--VTIFIPTIDDGTGSSIQTIRQVLES-L---PTSISTIFLPPVSFD 83 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~--Vt~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~ 83 (487)
+++||+++|+|++||++|++.||++|+++ ||+ |||++++.. ...+... . ..++.|..++..-..
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~r-Gh~v~vt~~~t~~~---------~~~~~~~~~~~~~~~i~~~~i~~glp~ 75 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAA-APHAVFSFFSTSQS---------NASIFHDSMHTMQCNIKSYDISDGVPE 75 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHH---------HHHHC-------CTTEEEEECCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhC-CCCeEEEEEeCchh---------HHHhhccccccCCCceEEEeCCCCCCC
Confidence 46799999999999999999999999876 765 577776532 2222221 1 236888888642111
Q ss_pred CCCCCcchHHHHHHHHHHhHHHHHHHHHHHhc--cCCceEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHhcccc
Q 011381 84 DLPDDFQIETRITLTLVRSLSSLRDALKVLAE--STRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTAMALSFLFHLPE 161 (487)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~ 161 (487)
+..........+........+.+++.++++.+ ..+||+||+|.++.|+..+|+++|||++.++++++..+..+.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 155 (456)
T 2c1x_A 76 GYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDE 155 (456)
T ss_dssp TCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHH
Confidence 11000011111211222223445566665443 2589999999999999999999999999999998776665544333
Q ss_pred cccccc--cccCCCCCcc-cCCCCcccCCCCCCCccc-ccchhH-HHHHHHHHHhhhcccEEEecccccccchHHHHhhc
Q 011381 162 LDVKFS--CEYRDMPEPV-QLPGCVPVHGRDFADGFQ-QRKNEA-YRFLLSFSKQYLLAAGIMVNSFMELETGPFKALME 236 (487)
Q Consensus 162 ~~~~~~--~~~~~~~~~~-~~p~~~~~~~~~l~~~~~-~r~~~~-~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~ 236 (487)
+..... .........+ .+|+++++...+++..+. ...... ...+.+........+++++|+++++|.++.+.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~ 235 (456)
T 2c1x_A 156 IREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKS 235 (456)
T ss_dssp HHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHH
T ss_pred HHhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHh
Confidence 211110 0001111122 246666555555554332 111112 22223333445678899999999999988777766
Q ss_pred ccCCCCCCCeEeeCcCcCCCCCC-CCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEE
Q 011381 237 GESSFKPPPVYPVGPLIQTGSNN-ETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVA 315 (487)
Q Consensus 237 ~~~~~~~p~~~~vGpl~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 315 (487)
. .|++++|||++...... .+. +.++.+||+.++++++|||||||......+++.+++++++..+++|||++
T Consensus 236 ~-----~~~~~~vGpl~~~~~~~~~~~---~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~ 307 (456)
T 2c1x_A 236 K-----LKTYLNIGPFNLITPPPVVPN---TTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSL 307 (456)
T ss_dssp H-----SSCEEECCCHHHHC------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred c-----CCCEEEecCcccCcccccccc---hhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 3 25899999997643221 111 35688999988788999999999987788889999999999999999999
Q ss_pred eCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCceecc
Q 011381 316 KSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAW 395 (487)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~ 395 (487)
+.... ..+|++|.++.+ .|+++++|+||.++|+|+++++||||||+||++||+++|||||++
T Consensus 308 ~~~~~-----------------~~l~~~~~~~~~-~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~ 369 (456)
T 2c1x_A 308 RDKAR-----------------VHLPEGFLEKTR-GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICR 369 (456)
T ss_dssp CGGGG-----------------GGSCTTHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred CCcch-----------------hhCCHHHHhhcC-CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEec
Confidence 86432 247777776653 578888999999999999999999999999999999999999999
Q ss_pred cccccchhhhHhhhccc-ceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHH
Q 011381 396 PLYSEQKMNAVLLTDDL-KVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQ 474 (487)
Q Consensus 396 P~~~DQ~~na~~v~~~~-G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 474 (487)
|++.||+.||+++++ . |+|+.+...+ +++++|.++|+++|+|+++++||+||+++++.+++++++|||+.+++++
T Consensus 370 P~~~dQ~~Na~~l~~-~~g~g~~l~~~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~ 445 (456)
T 2c1x_A 370 PFFGDQRLNGRMVED-VLEIGVRIEGGV---FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFIT 445 (456)
T ss_dssp CCSTTHHHHHHHHHH-TSCCEEECGGGS---CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHH
T ss_pred CChhhHHHHHHHHHH-HhCeEEEecCCC---cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHH
Confidence 999999999999999 7 9999998766 9999999999999998656699999999999999999999999999999
Q ss_pred HHHHHhcC
Q 011381 475 LARIWKNP 482 (487)
Q Consensus 475 ~~~~l~~~ 482 (487)
|++.+.+.
T Consensus 446 ~v~~~~~~ 453 (456)
T 2c1x_A 446 LVDLVSKP 453 (456)
T ss_dssp HHHHHTSC
T ss_pred HHHHHHhc
Confidence 99998653
No 6
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.4e-44 Score=361.61 Aligned_cols=349 Identities=20% Similarity=0.197 Sum_probs=223.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCC------
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSF------ 82 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 82 (487)
.+.|||||+++|++||++|+++||++|++| ||+|||++++.. ..+. ..++.+..+.....
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~~~~----------~~~~---~~g~~~~~~~~~~~~~~~~~ 85 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATGGDI----------RAVA---EAGLCAVDVSPGVNYAKLFV 85 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECSST----------HHHH---TTTCEEEESSTTCCSHHHHS
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeCcch----------hhHH---hcCCeeEecCCchhHhhhcc
Confidence 457999999999999999999999999776 999999998855 1122 22566666542210
Q ss_pred CCCCCC-------cchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHH
Q 011381 83 DDLPDD-------FQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTAMALSF 155 (487)
Q Consensus 83 ~~~~~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 155 (487)
...... ......+...+........+.+.++++.++||+||+|.+++++..+|+.+|||++.+...+......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 86 PDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp CCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH
T ss_pred ccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccc
Confidence 000000 0001111111111222222223333345599999999999999999999999998765442111000
Q ss_pred HhcccccccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHH-HhhhcccEEEecccccccchHHHHh
Q 011381 156 LFHLPELDVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFS-KQYLLAAGIMVNSFMELETGPFKAL 234 (487)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~-~~~~~~~~~l~~s~~~le~~~~~~~ 234 (487)
. . ......+....... ............. ........
T Consensus 166 ~--------------------------~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 203 (400)
T 4amg_A 166 L--------------------------G------------ALIRRAMSKDYERHGVTGEPTGSVRLTT----TPPSVEAL 203 (400)
T ss_dssp H--------------------------H------------HHHHHHTHHHHHHTTCCCCCSCEEEEEC----CCHHHHHT
T ss_pred h--------------------------h------------hHHHHHHHHHHHHhCCCcccccchhhcc----cCchhhcc
Confidence 0 0 00000000000000 0000000110100 01111111
Q ss_pred hcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCC--HHHHHHHHHHHHHcCCceE
Q 011381 235 MEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLS--QEQLNELALGLEMSGQRFL 312 (487)
Q Consensus 235 ~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i 312 (487)
.... ...+......+..... .....+|++..+++++|||||||+.... .+.+.++++++++.+.++|
T Consensus 204 ~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v 272 (400)
T 4amg_A 204 LPED--RRSPGAWPMRYVPYNG---------GAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFV 272 (400)
T ss_dssp SCGG--GCCTTCEECCCCCCCC---------CEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEE
T ss_pred Cccc--ccCCcccCcccccccc---------cccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEE
Confidence 1100 0122333333322211 3455678888888999999999985433 3568889999999999999
Q ss_pred EEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCce
Q 011381 313 WVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPI 392 (487)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~ 392 (487)
|..+.... +....+|+ |+++.+|+||.++|+|++ +||||||+||++||+++|||+
T Consensus 273 ~~~~~~~~--------------~~~~~~~~---------~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~ 327 (400)
T 4amg_A 273 LTLGGGDL--------------ALLGELPA---------NVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQ 327 (400)
T ss_dssp EECCTTCC--------------CCCCCCCT---------TEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCE
T ss_pred EEecCccc--------------cccccCCC---------CEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCE
Confidence 99887543 33445565 799999999999999999 999999999999999999999
Q ss_pred ecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHH
Q 011381 393 IAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAAN 460 (487)
Q Consensus 393 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~ 460 (487)
|++|++.||+.||+++++ +|+|+.++..+ .+++ +|+++|+| ++||+||+++++++++
T Consensus 328 v~~P~~~dQ~~na~~v~~-~G~g~~l~~~~---~~~~----al~~lL~d---~~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 328 CVIPHGSYQDTNRDVLTG-LGIGFDAEAGS---LGAE----QCRRLLDD---AGLREAALRVRQEMSE 384 (400)
T ss_dssp EECCC---CHHHHHHHHH-HTSEEECCTTT---CSHH----HHHHHHHC---HHHHHHHHHHHHHHHT
T ss_pred EEecCcccHHHHHHHHHH-CCCEEEcCCCC---chHH----HHHHHHcC---HHHHHHHHHHHHHHHc
Confidence 999999999999999999 99999998776 6654 66778888 9999999999999986
No 7
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.3e-43 Score=357.39 Aligned_cols=401 Identities=16% Similarity=0.174 Sum_probs=261.2
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCC
Q 011381 6 SKQIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDL 85 (487)
Q Consensus 6 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (487)
|.+-+++||+|++++++||++|+++||++|+++ ||+|+|++++.+ ...+.. .++.|..++.......
T Consensus 7 ~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~-Gh~V~~~~~~~~---------~~~~~~---~g~~~~~~~~~~~~~~ 73 (424)
T 2iya_A 7 SASVTPRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDEF---------AAQVKA---AGATPVVYDSILPKES 73 (424)
T ss_dssp ----CCCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGG---------HHHHHH---HTCEEEECCCCSCCTT
T ss_pred cCCcccceEEEEeCCCCcccchHHHHHHHHHHC-CCeEEEEeCHHH---------HHHHHh---CCCEEEecCccccccc
Confidence 333456899999999999999999999999775 999999998754 222222 2578888764211111
Q ss_pred C--C-CcchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHhccccc
Q 011381 86 P--D-DFQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTAMALSFLFHLPEL 162 (487)
Q Consensus 86 ~--~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 162 (487)
. . .......+...+......+.+.+.+++++.+||+||+|.++.|+..+|+++|||++.+++.+..........+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 153 (424)
T 2iya_A 74 NPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV 153 (424)
T ss_dssp CTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG
T ss_pred cchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc
Confidence 0 0 011111111222222333445556666677999999999888999999999999999987653110000000000
Q ss_pred ccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHh----------hhcccEEEecccccccchHHH
Q 011381 163 DVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQ----------YLLAAGIMVNSFMELETGPFK 232 (487)
Q Consensus 163 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~----------~~~~~~~l~~s~~~le~~~~~ 232 (487)
...+.. .......|...... ..+.... .........+.+.... ....+.++.++...++.+..
T Consensus 154 ~~~~~~----~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~- 226 (424)
T 2iya_A 154 QDPTAD----RGEEAAAPAGTGDA-EEGAEAE-DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGD- 226 (424)
T ss_dssp SCCCC--------------------------H-HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGG-
T ss_pred cccccc----cccccccccccccc-hhhhccc-hhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCcc-
Confidence 000000 00000000000000 0000000 0000001111111111 11355677888887776521
Q ss_pred HhhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceE
Q 011381 233 ALMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFL 312 (487)
Q Consensus 233 ~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 312 (487)
.++ +++++|||++... .+..+|++..+++++|||+|||......+.+..+++++++.+.+++
T Consensus 227 -------~~~-~~~~~vGp~~~~~----------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~ 288 (424)
T 2iya_A 227 -------TVG-DNYTFVGPTYGDR----------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVV 288 (424)
T ss_dssp -------GCC-TTEEECCCCCCCC----------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEE
T ss_pred -------CCC-CCEEEeCCCCCCc----------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 112 4799999976422 1233677655567899999999876567888899999999889999
Q ss_pred EEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCce
Q 011381 313 WVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPI 392 (487)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~ 392 (487)
|.++.... .+.+..+| .|+.+.+|+||.++|++++ +||||||+||++||+++|+|+
T Consensus 289 ~~~g~~~~-------------~~~~~~~~---------~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~ 344 (424)
T 2iya_A 289 LSVGRFVD-------------PADLGEVP---------PNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPM 344 (424)
T ss_dssp EECCTTSC-------------GGGGCSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCE
T ss_pred EEECCcCC-------------hHHhccCC---------CCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCE
Confidence 98886432 01112233 3799999999999999999 999999999999999999999
Q ss_pred ecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHH
Q 011381 393 IAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSL 472 (487)
Q Consensus 393 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 472 (487)
|++|...||+.||+++++ .|+|+.++.++ +++++|.++|+++|+| ++|+++++++++.+++ .++..+.+
T Consensus 345 i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~ 413 (424)
T 2iya_A 345 VAVPQIAEQTMNAERIVE-LGLGRHIPRDQ---VTAEKLREAVLAVASD---PGVAERLAAVRQEIRE----AGGARAAA 413 (424)
T ss_dssp EECCCSHHHHHHHHHHHH-TTSEEECCGGG---CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCHHHHHH
T ss_pred EEecCccchHHHHHHHHH-CCCEEEcCcCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHH
Confidence 999999999999999999 99999998776 8999999999999999 8999999999999985 45666666
Q ss_pred HHHHHHH
Q 011381 473 AQLARIW 479 (487)
Q Consensus 473 ~~~~~~l 479 (487)
+.+.+.+
T Consensus 414 ~~i~~~~ 420 (424)
T 2iya_A 414 DILEGIL 420 (424)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655544
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.8e-41 Score=338.12 Aligned_cols=369 Identities=15% Similarity=0.117 Sum_probs=243.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCC---CCCCC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFD---DLPDD 88 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 88 (487)
|||+|++.++.||++|+++||++|+++ ||+|+|++++.. . ..... .++.|..++..... .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~-Gh~V~~~~~~~~---------~-~~v~~--~g~~~~~i~~~~~~~~~~~~~~ 67 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPDC---------A-ERLAE--VGVPHVPVGPSARAPIQRAKPL 67 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGG---------H-HHHHH--TTCCEEECCC-------CCSCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC-CCeEEEEcCHHH---------H-HHHHH--cCCeeeeCCCCHHHHhhccccc
Confidence 689999999999999999999999775 999999998743 1 22222 26888887753211 11111
Q ss_pred cchHHHHHHHHHHhHHHHHHHHHHHhc-cCCceEEEeCC-Ccch--HHHHHHHhCCCcEEEecchHHHHHHHhccccccc
Q 011381 89 FQIETRITLTLVRSLSSLRDALKVLAE-STRLVALVVDP-FGSA--AFDVANEVGVPAYVFFTTTAMALSFLFHLPELDV 164 (487)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~D~VI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 164 (487)
.. ..+...+. ..+...++++.+ ..+||+||+|. +..| +..+|+++|||++.+++++..... .++|.
T Consensus 68 ~~--~~~~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~--~~~p~--- 137 (415)
T 1iir_A 68 TA--EDVRRFTT---EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS--PYYPP--- 137 (415)
T ss_dssp CH--HHHHHHHH---HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSCC---
T ss_pred ch--HHHHHHHH---HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC--cccCC---
Confidence 11 11111111 112333343332 46999999998 6777 788999999999998876533100 00000
Q ss_pred ccccccCCCCCcccCCCCcccCCCCCCCc-ccccc-----hhH-HHHHHHHHHhhhcc---------------cEEEecc
Q 011381 165 KFSCEYRDMPEPVQLPGCVPVHGRDFADG-FQQRK-----NEA-YRFLLSFSKQYLLA---------------AGIMVNS 222 (487)
Q Consensus 165 ~~~~~~~~~~~~~~~p~~~~~~~~~l~~~-~~~r~-----~~~-~~~~~~~~~~~~~~---------------~~~l~~s 222 (487)
+.. +. .++.. ...+. ... +..+.......... ..++.++
T Consensus 138 ---------------~~~-~~---~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~ 198 (415)
T 1iir_A 138 ---------------PPL-GE---PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAA 198 (415)
T ss_dssp ---------------CC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECS
T ss_pred ---------------ccC-Cc---cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEee
Confidence 000 00 00000 00000 000 00011111111100 0234555
Q ss_pred cccccc-hHHHHhhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHH
Q 011381 223 FMELET-GPFKALMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELA 301 (487)
Q Consensus 223 ~~~le~-~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~ 301 (487)
.+.++. + .+ . .++++|||++..... .. +.++.+|++.. +++|||+|||.. ...+.+..++
T Consensus 199 ~~~l~~~~--------~~--~-~~~~~vG~~~~~~~~--~~---~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~ 259 (415)
T 1iir_A 199 DPVLAPLQ--------PT--D-LDAVQTGAWILPDER--PL---SPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAI 259 (415)
T ss_dssp CTTTSCCC--------CC--S-SCCEECCCCCCCCCC--CC---CHHHHHHHHTS--SCCEEEECC----CCHHHHHHHH
T ss_pred ChhhcCCC--------cc--c-CCeEeeCCCccCccc--CC---CHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHH
Confidence 555543 1 00 1 178999999765321 11 67788999764 469999999986 5677888899
Q ss_pred HHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchh
Q 011381 302 LGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNS 381 (487)
Q Consensus 302 ~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt 381 (487)
+++++.+.+++|+++.... + ...+++ |+++.+|+||.++|++++ +||||||+||
T Consensus 260 ~al~~~~~~~v~~~g~~~~--------------~-~~~~~~---------~v~~~~~~~~~~~l~~~d--~~v~~~G~~t 313 (415)
T 1iir_A 260 DAIRAHGRRVILSRGWADL--------------V-LPDDGA---------DCFAIGEVNHQVLFGRVA--AVIHHGGAGT 313 (415)
T ss_dssp HHHHHTTCCEEECTTCTTC--------------C-CSSCGG---------GEEECSSCCHHHHGGGSS--EEEECCCHHH
T ss_pred HHHHHCCCeEEEEeCCCcc--------------c-ccCCCC---------CEEEeCcCChHHHHhhCC--EEEeCCChhH
Confidence 9999999999998876432 1 122333 799999999999998888 9999999999
Q ss_pred HHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHh
Q 011381 382 ILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANA 461 (487)
Q Consensus 382 ~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~ 461 (487)
++||+++|+|+|++|...||+.||+++++ .|+|+.++.++ +++++|.++|+++ +| ++|+++++++++.+++
T Consensus 314 ~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~~- 384 (415)
T 1iir_A 314 THVAARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDGPI---PTFDSLSAALATA-LT---PETHARATAVAGTIRT- 384 (415)
T ss_dssp HHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSSSS---CCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSCS-
T ss_pred HHHHHHcCCCEEECCCCCccHHHHHHHHH-CCCcccCCcCC---CCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHhh-
Confidence 99999999999999999999999999999 99999998776 8999999999999 88 8999999999998863
Q ss_pred cCCCCChHHHHHHHHHHH
Q 011381 462 LSPDGSSTKSLAQLARIW 479 (487)
Q Consensus 462 ~~~~g~~~~~~~~~~~~l 479 (487)
.++.++.++.+.+.+
T Consensus 385 ---~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 385 ---DGAAVAARLLLDAVS 399 (415)
T ss_dssp ---CHHHHHHHHHHHHHH
T ss_pred ---cChHHHHHHHHHHHH
Confidence 445555555444433
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.5e-40 Score=332.77 Aligned_cols=375 Identities=13% Similarity=0.045 Sum_probs=245.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCC---CC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLP---DD 88 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 88 (487)
|||++++.++.||++|+++||++|+++ ||+|+|++++.. . ..... .++.+..++........ .+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~-Gh~V~~~~~~~~---------~-~~v~~--~g~~~~~~~~~~~~~~~~~~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPAA---------E-ERLAE--VGVPHVPVGLPQHMMLQEGMPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGGG---------H-HHHHH--HTCCEEECSCCGGGCCCTTSCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHH---------H-HHHHH--cCCeeeecCCCHHHHHhhcccc
Confidence 689999999999999999999999775 999999998743 2 22221 25788877653111111 11
Q ss_pred cchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCC-Ccch--HHHHHHHhCCCcEEEecchHHHHHHHhcccccccc
Q 011381 89 FQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDP-FGSA--AFDVANEVGVPAYVFFTTTAMALSFLFHLPELDVK 165 (487)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (487)
. ....+...+......+.+.+.+. ..+||+||+|. +.++ +..+|+++|||++.+.+++..... .++
T Consensus 68 ~-~~~~~~~~~~~~~~~~~~~l~~~--~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--~~~------ 136 (416)
T 1rrv_A 68 P-PPEEEQRLAAMTVEMQFDAVPGA--AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--PHL------ 136 (416)
T ss_dssp C-CHHHHHHHHHHHHHHHHHHHHHH--TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSS------
T ss_pred c-hhHHHHHHHHHHHHHHHHHHHHH--hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--ccc------
Confidence 1 01112222211112222222221 45899999996 4556 778999999999988776432100 000
Q ss_pred cccccCCCCCcccCCCCc-ccCCCCCCCccccc-chhH-HHHHH----HHHHhh------------hcccEEEecccccc
Q 011381 166 FSCEYRDMPEPVQLPGCV-PVHGRDFADGFQQR-KNEA-YRFLL----SFSKQY------------LLAAGIMVNSFMEL 226 (487)
Q Consensus 166 ~~~~~~~~~~~~~~p~~~-~~~~~~l~~~~~~r-~~~~-~~~~~----~~~~~~------------~~~~~~l~~s~~~l 226 (487)
+ |... +.....+...+..+ .... +..+. ...... ... .++.++.+++
T Consensus 137 ----------p---~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l 202 (416)
T 1rrv_A 137 ----------P---PAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVL 202 (416)
T ss_dssp ----------C---CCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTT
T ss_pred ----------C---CCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccc
Confidence 0 0000 00000000000000 0000 00000 110000 011 3455555555
Q ss_pred cchHHHHhhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcC-CCHHHHHHHHHHHH
Q 011381 227 ETGPFKALMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGT-LSQEQLNELALGLE 305 (487)
Q Consensus 227 e~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~ 305 (487)
+++. + . .+++++||++..... . .+.++.+|++.. +++|||++||... ...+.+..++++++
T Consensus 203 ~~~~--------~--~-~~~~~vG~~~~~~~~--~---~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~ 264 (416)
T 1rrv_A 203 APLQ--------P--D-VDAVQTGAWLLSDER--P---LPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIR 264 (416)
T ss_dssp SCCC--------S--S-CCCEECCCCCCCCCC--C---CCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHH
T ss_pred cCCC--------C--C-CCeeeECCCccCccC--C---CCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHH
Confidence 4320 0 1 178999999765321 1 167788999764 4699999999753 34567888999999
Q ss_pred HcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHH
Q 011381 306 MSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILES 385 (487)
Q Consensus 306 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~ea 385 (487)
+.+.+++|+++.... + ...+|+ |+.+.+|+||.++|++++ +||||||+||++||
T Consensus 265 ~~~~~~v~~~g~~~~--------------~-~~~~~~---------~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea 318 (416)
T 1rrv_A 265 AQGRRVILSRGWTEL--------------V-LPDDRD---------DCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVA 318 (416)
T ss_dssp HTTCCEEEECTTTTC--------------C-CSCCCT---------TEEEESSCCHHHHGGGSS--EEEECCCHHHHHHH
T ss_pred HCCCeEEEEeCCccc--------------c-ccCCCC---------CEEEeccCChHHHhccCC--EEEecCChhHHHHH
Confidence 999999999887532 1 122333 789999999999999999 99999999999999
Q ss_pred HhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCC
Q 011381 386 IVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPD 465 (487)
Q Consensus 386 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~ 465 (487)
+++|+|+|++|...||+.||+++++ .|+|+.++.++ +++++|.++|+++ +| ++|+++++++++.+++ .
T Consensus 319 ~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~~----~ 386 (416)
T 1rrv_A 319 TRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDGPT---PTFESLSAALTTV-LA---PETRARAEAVAGMVLT----D 386 (416)
T ss_dssp HHHTCCEEECCCSBTHHHHHHHHHH-HTSEEECSSSC---CCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCCC----C
T ss_pred HHcCCCEEEccCCCCcHHHHHHHHH-CCCccCCCCCC---CCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHhh----c
Confidence 9999999999999999999999999 99999998766 8999999999999 88 8999999999988874 4
Q ss_pred CChHHHHHHHHHHHhc
Q 011381 466 GSSTKSLAQLARIWKN 481 (487)
Q Consensus 466 g~~~~~~~~~~~~l~~ 481 (487)
++. +.++.+++.+.+
T Consensus 387 ~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 387 GAA-AAADLVLAAVGR 401 (416)
T ss_dssp HHH-HHHHHHHHHHHC
T ss_pred CcH-HHHHHHHHHHhc
Confidence 444 666655244443
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=5.5e-39 Score=325.24 Aligned_cols=383 Identities=14% Similarity=0.120 Sum_probs=253.1
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCCC
Q 011381 8 QIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLPD 87 (487)
Q Consensus 8 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (487)
..++|||+|+++++.||++|+++||++|+++ ||+|+|++++.. ...+ .. .++.+..++.... ....
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~~---------~~~~-~~--~G~~~~~~~~~~~-~~~~ 82 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGGF---------AEPV-RA--AGATVVPYQSEII-DADA 82 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGG---------HHHH-HH--TTCEEEECCCSTT-TCCH
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHHH---------HHHH-Hh--cCCEEEecccccc-cccc
Confidence 3457899999999999999999999999775 999999997643 2222 22 2588888764211 1000
Q ss_pred -----CcchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeC-CCcchHHHHHHHhCCCcEEEecchHHHHHHHhcccc
Q 011381 88 -----DFQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVD-PFGSAAFDVANEVGVPAYVFFTTTAMALSFLFHLPE 161 (487)
Q Consensus 88 -----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~ 161 (487)
.......+...+......+...+.+++++++||+||+| +..+++..+|+++|||++.+.+..... ..+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~----~~~~~ 158 (415)
T 3rsc_A 83 AEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN----EHYSF 158 (415)
T ss_dssp HHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC----SSCCH
T ss_pred chhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc----Ccccc
Confidence 00001111110111222233444555667899999999 778888889999999999876432110 00000
Q ss_pred cccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHH-------Hhhh-cccEEEecccccccchHHHH
Q 011381 162 LDVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFS-------KQYL-LAAGIMVNSFMELETGPFKA 233 (487)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~-------~~~~-~~~~~l~~s~~~le~~~~~~ 233 (487)
. +...+......+. .+......+..+.... .... ..+..+......++..
T Consensus 159 ~-----------------~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~---- 216 (415)
T 3rsc_A 159 S-----------------QDMVTLAGTIDPL-DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA---- 216 (415)
T ss_dssp H-----------------HHHHHHHTCCCGG-GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT----
T ss_pred c-----------------cccccccccCChh-hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC----
Confidence 0 0000000000000 0111111111111110 0000 1134444443333322
Q ss_pred hhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEE
Q 011381 234 LMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLW 313 (487)
Q Consensus 234 ~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 313 (487)
.. .++ .++.++||++... .+...|....+++++|||++||......+.+..+++++++.+.+++|
T Consensus 217 -~~---~~~-~~~~~vGp~~~~~----------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~ 281 (415)
T 3rsc_A 217 -GD---TFD-DRFVFVGPCFDDR----------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVM 281 (415)
T ss_dssp -GG---GCC-TTEEECCCCCCCC----------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred -cc---cCC-CceEEeCCCCCCc----------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 11 112 3689999986532 22334655555678999999998766777889999999999999999
Q ss_pred EEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCcee
Q 011381 314 VAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPII 393 (487)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v 393 (487)
.++.+.. .+.+..+++ |+++.+|+|+.++|++++ +||||||+||++||+++|+|+|
T Consensus 282 ~~g~~~~-------------~~~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v 337 (415)
T 3rsc_A 282 TLGGQVD-------------PAALGDLPP---------NVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLV 337 (415)
T ss_dssp ECTTTSC-------------GGGGCCCCT---------TEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEE
T ss_pred EeCCCCC-------------hHHhcCCCC---------cEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEE
Confidence 8876422 012223333 899999999999999999 9999999999999999999999
Q ss_pred cccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHH
Q 011381 394 AWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLA 473 (487)
Q Consensus 394 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 473 (487)
++|...||+.||+++++ .|+|+.+..++ ++++.|.++|+++|+| ++++++++++++.+.+ .++.+++++
T Consensus 338 ~~p~~~~q~~~a~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~ 406 (415)
T 3rsc_A 338 VVPQSFDVQPMARRVDQ-LGLGAVLPGEK---ADGDTLLAAVGAVAAD---PALLARVEAMRGHVRR----AGGAARAAD 406 (415)
T ss_dssp ECCCSGGGHHHHHHHHH-HTCEEECCGGG---CCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHH----SCHHHHHHH
T ss_pred EeCCcchHHHHHHHHHH-cCCEEEcccCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCHHHHHHH
Confidence 99999999999999999 99999998877 8999999999999999 8999999999999986 567777777
Q ss_pred HHHHHHh
Q 011381 474 QLARIWK 480 (487)
Q Consensus 474 ~~~~~l~ 480 (487)
.+.+.+.
T Consensus 407 ~i~~~~~ 413 (415)
T 3rsc_A 407 AVEAYLA 413 (415)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 6666553
No 11
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.6e-38 Score=324.48 Aligned_cols=379 Identities=13% Similarity=0.123 Sum_probs=238.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCC-CC---
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSF-DD--- 84 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 84 (487)
..+|||+|++.++.||++|+++||++|+++ ||+|+|++++.. ..... ..++.|..++.... .+
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~~~~----------~~~v~--~~G~~~~~i~~~~~~~~~~~ 84 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVASPAL----------TEDIT--AAGLTAVPVGTDVDLVDFMT 84 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEECGGG----------HHHHH--TTTCCEEECSCCCCHHHHHH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeCchh----------HHHHH--hCCCceeecCCccchHHHhh
Confidence 457899999999999999999999999775 999999998743 22222 23688888875310 00
Q ss_pred ------------CC-----C---CcchHHHHHHHHHH--h--H--H-HHHHHHHHHhccCCceEEEeCCCcchHHHHHHH
Q 011381 85 ------------LP-----D---DFQIETRITLTLVR--S--L--S-SLRDALKVLAESTRLVALVVDPFGSAAFDVANE 137 (487)
Q Consensus 85 ------------~~-----~---~~~~~~~~~~~~~~--~--~--~-~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~ 137 (487)
.. . .++........+.. . . . .+.++ .+++++++||+||+|..+.++..+|+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~pDlVv~d~~~~~~~~aA~~ 163 (441)
T 2yjn_A 85 HAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGM-VSFCRKWRPDLVIWEPLTFAAPIAAAV 163 (441)
T ss_dssp HTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHH-HHHHHHHCCSEEEECTTCTHHHHHHHH
T ss_pred hhhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHH-HHHHHhcCCCEEEecCcchhHHHHHHH
Confidence 00 0 00111111111110 0 0 1 22222 222344599999999988888899999
Q ss_pred hCCCcEEEecchHHHHHHHhcccccccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHh--h---
Q 011381 138 VGVPAYVFFTTTAMALSFLFHLPELDVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQ--Y--- 212 (487)
Q Consensus 138 lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~--~--- 212 (487)
+|||++.+...+.........+... ++..+.. ..+++....+..+...... .
T Consensus 164 lgiP~v~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~------~~~~~~~~~l~~~~~~~g~~~~~~~ 220 (441)
T 2yjn_A 164 TGTPHARLLWGPDITTRARQNFLGL-----------------LPDQPEE------HREDPLAEWLTWTLEKYGGPAFDEE 220 (441)
T ss_dssp HTCCEEEECSSCCHHHHHHHHHHHH-----------------GGGSCTT------TCCCHHHHHHHHHHHHTTCCCCCGG
T ss_pred cCCCEEEEecCCCcchhhhhhhhhh-----------------ccccccc------cccchHHHHHHHHHHHcCCCCCCcc
Confidence 9999998865543321110000000 0000000 0111111222222111100 0
Q ss_pred -hcccEEEecccccccchHHHHhhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcC
Q 011381 213 -LLAAGIMVNSFMELETGPFKALMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGT 291 (487)
Q Consensus 213 -~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~ 291 (487)
...+.++.+....++.+ . +.+. ..+++..... +.++.+|++..+++++|||++||...
T Consensus 221 ~~~~~~~l~~~~~~~~~~---------~--~~~~-~~~~~~~~~~---------~~~~~~~l~~~~~~~~v~v~~Gs~~~ 279 (441)
T 2yjn_A 221 VVVGQWTIDPAPAAIRLD---------T--GLKT-VGMRYVDYNG---------PSVVPEWLHDEPERRRVCLTLGISSR 279 (441)
T ss_dssp GTSCSSEEECSCGGGSCC---------C--CCCE-EECCCCCCCS---------SCCCCGGGSSCCSSCEEEEEC-----
T ss_pred ccCCCeEEEecCccccCC---------C--CCCC-CceeeeCCCC---------CcccchHhhcCCCCCEEEEECCCCcc
Confidence 00112222222222211 0 0010 1222221110 34566899866667899999999854
Q ss_pred C---CHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccC
Q 011381 292 L---SQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHG 368 (487)
Q Consensus 292 ~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~ 368 (487)
. ..+.+..+++++++.+.++||+.+.... +.+..+++ |+.+.+|+||.++|+++
T Consensus 280 ~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~--------------~~l~~~~~---------~v~~~~~~~~~~ll~~a 336 (441)
T 2yjn_A 280 ENSIGQVSIEELLGAVGDVDAEIIATFDAQQL--------------EGVANIPD---------NVRTVGFVPMHALLPTC 336 (441)
T ss_dssp -----CCSTTTTHHHHHTSSSEEEECCCTTTT--------------SSCSSCCS---------SEEECCSCCHHHHGGGC
T ss_pred cccChHHHHHHHHHHHHcCCCEEEEEECCcch--------------hhhccCCC---------CEEEecCCCHHHHHhhC
Confidence 3 3456778889999999999998885432 12222333 89999999999999999
Q ss_pred cccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHH
Q 011381 369 STGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLR 448 (487)
Q Consensus 369 ~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~ 448 (487)
+ +||||||+||++||+++|+|+|++|...||+.||+++++ .|+|+.++.++ ++++.|.++|+++|+| ++|+
T Consensus 337 d--~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~ 407 (441)
T 2yjn_A 337 A--ATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPE---LTPDQLRESVKRVLDD---PAHR 407 (441)
T ss_dssp S--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTT---CCHHHHHHHHHHHHHC---HHHH
T ss_pred C--EEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccccc---CCHHHHHHHHHHHhcC---HHHH
Confidence 9 999999999999999999999999999999999999999 99999998776 8999999999999999 8999
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhc
Q 011381 449 KKMRALKDAAANALSPDGSSTKSLAQLARIWKN 481 (487)
Q Consensus 449 ~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 481 (487)
++++++++.+.+ .++.++.++.+.+.+.+
T Consensus 408 ~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 408 AGAARMRDDMLA----EPSPAEVVGICEELAAG 436 (441)
T ss_dssp HHHHHHHHHHHT----SCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHh
Confidence 999999999985 55666666666655543
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.4e-39 Score=326.53 Aligned_cols=362 Identities=14% Similarity=0.062 Sum_probs=242.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCC--CC--CC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFD--DL--PD 87 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~ 87 (487)
|||+|++.++.||++|+++||++|+++ ||+|+|++++.. ....+. .++.|..++..... .. ..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~~----------~~~v~~--~g~~~~~l~~~~~~~~~~~~~~ 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPDY----------VERCAE--VGVPMVPVGRAVRAGAREPGEL 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGGG----------HHHHHH--TTCCEEECSSCSSGGGSCTTCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHH----------HHHHHH--cCCceeecCCCHHHHhccccCC
Confidence 689999999999999999999999765 999999998743 233332 25788887643210 00 00
Q ss_pred CcchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchH---HHHHHHhCCCcEEEecchHHHHHHHhccccccc
Q 011381 88 DFQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAA---FDVANEVGVPAYVFFTTTAMALSFLFHLPELDV 164 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 164 (487)
..+....+.. ......+.+.+.. .+||+||+|..+..+ ..+|+++|||++.+..++....+
T Consensus 68 ~~~~~~~~~~----~~~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~---------- 131 (404)
T 3h4t_A 68 PPGAAEVVTE----VVAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS---------- 131 (404)
T ss_dssp CTTCGGGHHH----HHHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG----------
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC----------
Confidence 1111111111 1122222223322 379999998765554 57899999999988766532100
Q ss_pred ccccccCCCCCcccCCCCcccCCCCCCCcccc-cchhHHHHHHHHHHhhhcc---------------cEEEecccccccc
Q 011381 165 KFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQ-RKNEAYRFLLSFSKQYLLA---------------AGIMVNSFMELET 228 (487)
Q Consensus 165 ~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~-r~~~~~~~~~~~~~~~~~~---------------~~~l~~s~~~le~ 228 (487)
+.+ ...+. +....+..+....+..... +..+.+..+.+.+
T Consensus 132 ---------------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p 187 (404)
T 3h4t_A 132 ---------------EQS---------QAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSP 187 (404)
T ss_dssp ---------------GSC---------HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSC
T ss_pred ---------------hhH---------HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeC
Confidence 000 00000 0000011111111111000 0111122222211
Q ss_pred hHHHHhhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcC
Q 011381 229 GPFKALMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSG 308 (487)
Q Consensus 229 ~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 308 (487)
. +. ..++++++|+++...... . ++++.+|++. .+++|||+|||+.. ..+.+..+++++++.+
T Consensus 188 ~---------~~-~~~~~~~~G~~~~~~~~~--~---~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~ 249 (404)
T 3h4t_A 188 L---------RP-TDLGTVQTGAWILPDQRP--L---SAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQG 249 (404)
T ss_dssp C---------CT-TCCSCCBCCCCCCCCCCC--C---CHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTT
T ss_pred C---------CC-CCCCeEEeCccccCCCCC--C---CHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCC
Confidence 1 11 124788999876544322 2 6778889875 35699999999876 6778899999999999
Q ss_pred CceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhh
Q 011381 309 QRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVH 388 (487)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~ 388 (487)
.++||+.+.... + ...++ .|+++.+|+||.++|++++ +||||||+||+.||+++
T Consensus 250 ~~vv~~~g~~~~--------------~-~~~~~---------~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~ 303 (404)
T 3h4t_A 250 RRVVLSSGWAGL--------------G-RIDEG---------DDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRA 303 (404)
T ss_dssp CCEEEECTTTTC--------------C-CSSCC---------TTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHH
T ss_pred CEEEEEeCCccc--------------c-cccCC---------CCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHc
Confidence 999999886533 1 11123 3899999999999999999 99999999999999999
Q ss_pred CCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCCh
Q 011381 389 GVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSS 468 (487)
Q Consensus 389 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~ 468 (487)
|+|+|++|+..||+.||+++++ .|+|+.+...+ ++++.|.++|+++|+ ++|+++++++++.+. . ++.
T Consensus 304 GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~~~---~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~----~-~~~ 370 (404)
T 3h4t_A 304 GAPQVVVPQKADQPYYAGRVAD-LGVGVAHDGPT---PTVESLSAALATALT----PGIRARAAAVAGTIR----T-DGT 370 (404)
T ss_dssp TCCEEECCCSTTHHHHHHHHHH-HTSEEECSSSS---CCHHHHHHHHHHHTS----HHHHHHHHHHHTTCC----C-CHH
T ss_pred CCCEEEcCCcccHHHHHHHHHH-CCCEeccCcCC---CCHHHHHHHHHHHhC----HHHHHHHHHHHHHHh----h-hHH
Confidence 9999999999999999999999 99999998776 899999999999996 589999999998876 4 566
Q ss_pred HHHHHHHHHHHhcCC
Q 011381 469 TKSLAQLARIWKNPE 483 (487)
Q Consensus 469 ~~~~~~~~~~l~~~~ 483 (487)
+++++.+.+.+....
T Consensus 371 ~~~~~~i~~~~~~~~ 385 (404)
T 3h4t_A 371 TVAAKLLLEAISRQR 385 (404)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhhCC
Confidence 777777766665443
No 13
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.4e-37 Score=311.50 Aligned_cols=378 Identities=16% Similarity=0.178 Sum_probs=249.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCC--CCCC--
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSF--DDLP-- 86 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 86 (487)
++||+|+++++.||++|++.||++|+++ ||+|+|++++.+ ...... .++.+..++.... ...+
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~~----------~~~~~~--~G~~~~~~~~~~~~~~~~~~~ 70 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPLF----------ADEVKA--AGAEVVLYKSEFDTFHVPEVV 70 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHHH----------HHHHHH--TTCEEEECCCGGGTSSSSSSS
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHHH----------HHHHHH--cCCEEEecccccccccccccc
Confidence 3499999999999999999999999775 999999997633 222222 2578887763210 0000
Q ss_pred CCcchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeC-CCcchHHHHHHHhCCCcEEEecchHHHHHHHhcccccccc
Q 011381 87 DDFQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVD-PFGSAAFDVANEVGVPAYVFFTTTAMALSFLFHLPELDVK 165 (487)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (487)
........+...+..........+.+++++++||+||+| ++..++..+|+++|||++.+.+..... ..+...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~----~~~~~~--- 143 (402)
T 3ia7_A 71 KQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAAN----EHYSLF--- 143 (402)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCB----TTBCHH---
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccC----cccccc---
Confidence 111122222220111222233444555567799999999 788888889999999999876432110 000000
Q ss_pred cccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHhh----------h-cccEEEecccccccchHHHHh
Q 011381 166 FSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQY----------L-LAAGIMVNSFMELETGPFKAL 234 (487)
Q Consensus 166 ~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~----------~-~~~~~l~~s~~~le~~~~~~~ 234 (487)
+.+.+......+. .+. .....+....... . ..+..+.....+++..
T Consensus 144 --------------~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~----- 200 (402)
T 3ia7_A 144 --------------KELWKSNGQRHPA-DVE---AVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF----- 200 (402)
T ss_dssp --------------HHHHHHHTCCCGG-GSH---HHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----
T ss_pred --------------ccccccccccChh-hHH---HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----
Confidence 0000000000000 000 0111111111111 0 0133333333333322
Q ss_pred hcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEE
Q 011381 235 MEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWV 314 (487)
Q Consensus 235 ~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 314 (487)
. ..++ .++.++||+.... .+...|+...+++++||+++||......+.+..+++++++.+.+++|.
T Consensus 201 ~---~~~~-~~~~~vGp~~~~~----------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (402)
T 3ia7_A 201 A---ETFD-ERFAFVGPTLTGR----------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMA 266 (402)
T ss_dssp G---GGCC-TTEEECCCCCCC--------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred c---ccCC-CCeEEeCCCCCCc----------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 0 1112 4699999986532 122345554556789999999987667778899999999999899988
Q ss_pred EeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCceec
Q 011381 315 AKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIA 394 (487)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~ 394 (487)
++.+.. .+.+..++ .|+.+.+|+|+.++|++++ +||||||+||+.||+++|+|+|+
T Consensus 267 ~g~~~~-------------~~~~~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~ 322 (402)
T 3ia7_A 267 IGGFLD-------------PAVLGPLP---------PNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVL 322 (402)
T ss_dssp CCTTSC-------------GGGGCSCC---------TTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEE
T ss_pred eCCcCC-------------hhhhCCCC---------CcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEE
Confidence 886422 01122233 3899999999999999999 99999999999999999999999
Q ss_pred ccc-cccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHH
Q 011381 395 WPL-YSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLA 473 (487)
Q Consensus 395 ~P~-~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 473 (487)
+|. ..||+.||.++++ .|+|+.+..++ ++++.|.++++++|+| ++++++++++++.+.+ .++.++.++
T Consensus 323 ~p~~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~ 391 (402)
T 3ia7_A 323 VPHFATEAAPSAERVIE-LGLGSVLRPDQ---LEPASIREAVERLAAD---SAVRERVRRMQRDILS----SGGPARAAD 391 (402)
T ss_dssp CGGGCGGGHHHHHHHHH-TTSEEECCGGG---CSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCHHHHHHH
T ss_pred eCCCcccHHHHHHHHHH-cCCEEEccCCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHhh----CChHHHHHH
Confidence 999 9999999999999 99999998876 8999999999999999 8999999999999984 667777777
Q ss_pred HHHHHHh
Q 011381 474 QLARIWK 480 (487)
Q Consensus 474 ~~~~~l~ 480 (487)
.+.+.+.
T Consensus 392 ~i~~~~~ 398 (402)
T 3ia7_A 392 EVEAYLG 398 (402)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7666554
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=6e-37 Score=307.09 Aligned_cols=358 Identities=15% Similarity=0.095 Sum_probs=238.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCC--------
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFD-------- 83 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 83 (487)
|||++++.++.||++|+++||++|+++ ||+|+|++++.. . ..... .++.+..++.....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~-Gh~V~~~~~~~~---------~-~~~~~--~g~~~~~~~~~~~~~~~~~~~~ 67 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQDM---------G-PVVTG--VGLPAVATTDLPIRHFITTDRE 67 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGGG---------H-HHHHH--TTCCEEESCSSCHHHHHHBCTT
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC-CCEEEEEeCHHH---------H-HHHHh--CCCEEEEeCCcchHHHHhhhcc
Confidence 689999999999999999999999775 999999997643 1 22222 25777777642100
Q ss_pred CCC----CCcchHHHH-HHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHhc
Q 011381 84 DLP----DDFQIETRI-TLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTAMALSFLFH 158 (487)
Q Consensus 84 ~~~----~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~ 158 (487)
..+ ........+ ...+..........+.+++++.+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------- 140 (384)
T 2p6p_A 68 GRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------- 140 (384)
T ss_dssp SCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-------
T ss_pred cCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-------
Confidence 011 110111111 11111111111222223334459999999998888888999999999876432100
Q ss_pred ccccccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHH--hhhcccEEEecccccccchHHHHhhc
Q 011381 159 LPELDVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSK--QYLLAAGIMVNSFMELETGPFKALME 236 (487)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~--~~~~~~~~l~~s~~~le~~~~~~~~~ 236 (487)
+. . ........+..+..... .....+.++.++...++... .
T Consensus 141 ---------------------~~-------~----~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~ 183 (384)
T 2p6p_A 141 ---------------------AD-------G----IHPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN-----A 183 (384)
T ss_dssp ---------------------CT-------T----THHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-----S
T ss_pred ---------------------cc-------h----hhHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-----C
Confidence 00 0 00000011111111100 00013456677766665431 0
Q ss_pred ccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCC-----CHHHHHHHHHHHHHcCCce
Q 011381 237 GESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTL-----SQEQLNELALGLEMSGQRF 311 (487)
Q Consensus 237 ~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~ 311 (487)
++.+++.++++ .. +.++.+|++..+++++|||++||.... ..+.+..+++++++.+.++
T Consensus 184 ----~~~~~~~~~~~----~~--------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~ 247 (384)
T 2p6p_A 184 ----APARMMRHVAT----SR--------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVEL 247 (384)
T ss_dssp ----CCCEECCCCCC----CC--------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEE
T ss_pred ----CCCCceEecCC----CC--------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEE
Confidence 01112333321 10 234567887655568999999998654 4577888999999999999
Q ss_pred EEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCc
Q 011381 312 LWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVP 391 (487)
Q Consensus 312 i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP 391 (487)
+|+.+.... +.+. + .+.|+.+ +|+||.++|++++ +||||||+||++||+++|+|
T Consensus 248 ~~~~g~~~~---------------------~~l~-~-~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P 301 (384)
T 2p6p_A 248 IVAAPDTVA---------------------EALR-A-EVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVP 301 (384)
T ss_dssp EEECCHHHH---------------------HHHH-H-HCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCC
T ss_pred EEEeCCCCH---------------------HhhC-C-CCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCC
Confidence 998774211 1111 1 1348999 9999999999999 99999999999999999999
Q ss_pred eecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHH
Q 011381 392 IIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKS 471 (487)
Q Consensus 392 ~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 471 (487)
+|++|...||+.||.++++ .|+|+.++.++ ++++.|.++|+++|+| ++++++++++++.+++ .++.+++
T Consensus 302 ~v~~p~~~dq~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~ 370 (384)
T 2p6p_A 302 QLLIPKGSVLEAPARRVAD-YGAAIALLPGE---DSTEAIADSCQELQAK---DTYARRAQDLSREISG----MPLPATV 370 (384)
T ss_dssp EEECCCSHHHHHHHHHHHH-HTSEEECCTTC---CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCCHHHH
T ss_pred EEEccCcccchHHHHHHHH-CCCeEecCcCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----CCCHHHH
Confidence 9999999999999999999 99999998766 8999999999999999 8999999999999985 5566666
Q ss_pred HHHHHHHH
Q 011381 472 LAQLARIW 479 (487)
Q Consensus 472 ~~~~~~~l 479 (487)
++.+.+-+
T Consensus 371 ~~~i~~~~ 378 (384)
T 2p6p_A 371 VTALEQLA 378 (384)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66655443
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8.9e-36 Score=303.13 Aligned_cols=378 Identities=19% Similarity=0.172 Sum_probs=246.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCCCC--
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLPDD-- 88 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 88 (487)
+|||++++.++.||++|++.|+++|+++ ||+|+|++++.. ...+ . ..++.+..++..........
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~-G~~V~~~~~~~~---------~~~~-~--~~g~~~~~~~~~~~~~~~~~~~ 73 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPVF---------ADKV-A--ATGPRPVLYHSTLPGPDADPEA 73 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGG---------HHHH-H--TTSCEEEECCCCSCCTTSCGGG
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC-CCeEEEEeCHHH---------HHHH-H--hCCCEEEEcCCcCccccccccc
Confidence 5799999999999999999999999775 999999997743 2222 2 23688888774311111000
Q ss_pred -cchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHhcccccccccc
Q 011381 89 -FQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTAMALSFLFHLPELDVKFS 167 (487)
Q Consensus 89 -~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 167 (487)
..........+......+...+.+++++.+||+||+|...+++..+|+++|||++.+++.+...... ...+ ..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~~--~~--- 147 (430)
T 2iyf_A 74 WGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEEV--AE--- 147 (430)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHHT--HH---
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-cccc--cc---
Confidence 0011111111111122333444555566799999999887788889999999999887653210000 0000 00
Q ss_pred cccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHh----------hhcccEEEecccccccchHHHHhhcc
Q 011381 168 CEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQ----------YLLAAGIMVNSFMELETGPFKALMEG 237 (487)
Q Consensus 168 ~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~----------~~~~~~~l~~s~~~le~~~~~~~~~~ 237 (487)
+.. ..... .+ ........+.+.... ....+.++.++...++... .
T Consensus 148 --------~~~-~~~~~-----~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~- 202 (430)
T 2iyf_A 148 --------PMW-REPRQ-----TE-----RGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA-----D- 202 (430)
T ss_dssp --------HHH-HHHHH-----SH-----HHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG-----G-
T ss_pred --------chh-hhhcc-----ch-----HHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc-----c-
Confidence 000 00000 00 000000111111111 1134567777777666541 1
Q ss_pred cCCCCCCC-eEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHc-CCceEEEE
Q 011381 238 ESSFKPPP-VYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMS-GQRFLWVA 315 (487)
Q Consensus 238 ~~~~~~p~-~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~ 315 (487)
.++ ++ ++++||.+.... +..+|....+++++||+++||......+.+..+++++++. +.+++|.+
T Consensus 203 --~~~-~~~v~~vG~~~~~~~----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (430)
T 2iyf_A 203 --RVD-EDVYTFVGACQGDRA----------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQI 269 (430)
T ss_dssp --GSC-TTTEEECCCCC---------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred --cCC-CccEEEeCCcCCCCC----------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEe
Confidence 112 46 999998654321 1124555445578999999998755667788899999886 77888888
Q ss_pred eCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCceecc
Q 011381 316 KSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAW 395 (487)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~ 395 (487)
+.+.. .+.+..++ .|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++
T Consensus 270 G~~~~-------------~~~l~~~~---------~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~ 325 (430)
T 2iyf_A 270 GRKVT-------------PAELGELP---------DNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAV 325 (430)
T ss_dssp C---C-------------GGGGCSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEEC
T ss_pred CCCCC-------------hHHhccCC---------CCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEEC
Confidence 76432 01112233 3799999999999999999 999999999999999999999999
Q ss_pred cccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 011381 396 PLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQL 475 (487)
Q Consensus 396 P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 475 (487)
|...||+.|++++++ .|+|+.+..++ ++++.|.++|+++++| +++++++.++++.+.+ .++.++.++.+
T Consensus 326 p~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i 394 (430)
T 2iyf_A 326 PQAVDQFGNADMLQG-LGVARKLATEE---ATADLLRETALALVDD---PEVARRLRRIQAEMAQ----EGGTRRAADLI 394 (430)
T ss_dssp CCSHHHHHHHHHHHH-TTSEEECCCC----CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HCHHHHHHHHH
T ss_pred CCccchHHHHHHHHH-cCCEEEcCCCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHHHHH
Confidence 999999999999999 99999998776 8999999999999998 8999999999998875 34666666665
Q ss_pred HHHHh
Q 011381 476 ARIWK 480 (487)
Q Consensus 476 ~~~l~ 480 (487)
.+.+.
T Consensus 395 ~~~~~ 399 (430)
T 2iyf_A 395 EAELP 399 (430)
T ss_dssp HTTSC
T ss_pred HHHhh
Confidence 54443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.1e-36 Score=304.57 Aligned_cols=360 Identities=16% Similarity=0.134 Sum_probs=218.5
Q ss_pred cCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCC---
Q 011381 5 KSKQIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVS--- 81 (487)
Q Consensus 5 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 81 (487)
+++++.+|||+|++.++.||++|++.|+++|+++ ||+|++++++.. ...... .++.+..++...
T Consensus 9 ~~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~-GheV~v~~~~~~----------~~~~~~--~G~~~~~~~~~~~~~ 75 (398)
T 4fzr_A 9 GVPRGSHMRILVIAGCSEGFVMPLVPLSWALRAA-GHEVLVAASENM----------GPTVTG--AGLPFAPTCPSLDMP 75 (398)
T ss_dssp ------CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEEGGG----------HHHHHH--TTCCEEEEESSCCHH
T ss_pred CCCCCCceEEEEEcCCCcchHHHHHHHHHHHHHC-CCEEEEEcCHHH----------HHHHHh--CCCeeEecCCccchH
Confidence 3455668999999999999999999999999765 999999997633 222222 246666665210
Q ss_pred ----------CCCCCCC-cchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEEecchH
Q 011381 82 ----------FDDLPDD-FQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTA 150 (487)
Q Consensus 82 ----------~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~ 150 (487)
....+.. ......+...+......+...+.+++++++||+||+|...+++..+|+.+|||++.+.....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~ 155 (398)
T 4fzr_A 76 EVLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLA 155 (398)
T ss_dssp HHHSBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC
T ss_pred hhhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCC
Confidence 0000001 11111222222222222233344444455999999999888888999999999987654321
Q ss_pred HHHHHHhcccccccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHhhh-----cccEEEeccccc
Q 011381 151 MALSFLFHLPELDVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQYL-----LAAGIMVNSFME 225 (487)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~-----~~~~~l~~s~~~ 225 (487)
...... ......+......+. .....+......
T Consensus 156 ~~~~~~------------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (398)
T 4fzr_A 156 SPELIK------------------------------------------SAGVGELAPELAELGLTDFPDPLLSIDVCPPS 193 (398)
T ss_dssp CCHHHH------------------------------------------HHHHHHTHHHHHTTTCSSCCCCSEEEECSCGG
T ss_pred Cchhhh------------------------------------------HHHHHHHHHHHHHcCCCCCCCCCeEEEeCChh
Confidence 100000 000000001111110 111222222222
Q ss_pred ccchHHHHhhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCC--------CHHHH
Q 011381 226 LETGPFKALMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTL--------SQEQL 297 (487)
Q Consensus 226 le~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~ 297 (487)
+... ..+....+... +... . ..++..|+...+++++|||++||.... ..+.+
T Consensus 194 ~~~~------------~~~~~~~~~~~-~~~~-~------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~ 253 (398)
T 4fzr_A 194 MEAQ------------PKPGTTKMRYV-PYNG-R------NDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLL 253 (398)
T ss_dssp GC----------------CCCEECCCC-CCCC-S------SCCCCHHHHSCCSSCEEECC----------------CCSH
T ss_pred hCCC------------CCCCCCCeeee-CCCC-C------CCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHH
Confidence 2111 00111111111 0000 0 345566776655678999999998432 34568
Q ss_pred HHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCccccccccc
Q 011381 298 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHC 377 (487)
Q Consensus 298 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~Hg 377 (487)
..+++++++.+.+++|+.+.... +.+..++ .|+++.+|+|+.++|++++ +|||||
T Consensus 254 ~~~~~al~~~~~~~v~~~~~~~~--------------~~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~g 308 (398)
T 4fzr_A 254 QALSQELPKLGFEVVVAVSDKLA--------------QTLQPLP---------EGVLAAGQFPLSAIMPACD--VVVHHG 308 (398)
T ss_dssp HHHHHHGGGGTCEEEECCCC----------------------CC---------TTEEEESCCCHHHHGGGCS--EEEECC
T ss_pred HHHHHHHHhCCCEEEEEeCCcch--------------hhhccCC---------CcEEEeCcCCHHHHHhhCC--EEEecC
Confidence 88999999999999998776432 1222333 3899999999999999999 999999
Q ss_pred CchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHH
Q 011381 378 GWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDA 457 (487)
Q Consensus 378 G~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~ 457 (487)
|.||+.||+++|+|+|++|...||+.|+.++++ .|+|+.++.++ ++++.|.++|+++|+| +++++++++.++.
T Consensus 309 G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~ 381 (398)
T 4fzr_A 309 GHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHA-AGAGVEVPWEQ---AGVESVLAACARIRDD---SSYVGNARRLAAE 381 (398)
T ss_dssp CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHC---THHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCccc---CCHHHHHHHHHHHHhC---HHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 99999998876 8999999999999999 8999999999999
Q ss_pred HHHhcCCCCChHHHHHHH
Q 011381 458 AANALSPDGSSTKSLAQL 475 (487)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~ 475 (487)
+.+ ..+.++.++.+
T Consensus 382 ~~~----~~~~~~~~~~l 395 (398)
T 4fzr_A 382 MAT----LPTPADIVRLI 395 (398)
T ss_dssp HTT----SCCHHHHHHHH
T ss_pred HHc----CCCHHHHHHHH
Confidence 874 55555555443
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=3.5e-35 Score=295.69 Aligned_cols=352 Identities=15% Similarity=0.154 Sum_probs=230.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCC-C----
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSF-D---- 83 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 83 (487)
.+.|||+|++.++.||++|++.|+++|.++ ||+|+|+++ .. ...+ . ..++.+..++.... .
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~-~~---------~~~~-~--~~G~~~~~~~~~~~~~~~~~ 83 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTA-GHDVLIAVA-EH---------ADRA-A--AAGLEVVDVAPDYSAVKVFE 83 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEES-SC---------HHHH-H--TTTCEEEESSTTCCHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHC-CCEEEEecc-ch---------HHHH-H--hCCCeeEecCCccCHHHHhh
Confidence 346899999999999999999999999765 999999998 44 2222 2 23688888874210 0
Q ss_pred ---------------CCCCCcchH-HHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEEec
Q 011381 84 ---------------DLPDDFQIE-TRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVFFT 147 (487)
Q Consensus 84 ---------------~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~ 147 (487)
......... ..+..........+.+.++++ +||+||+|...+++..+|+.+|||++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~ 159 (398)
T 3oti_A 84 QVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----RPDLVVYEQGATVGLLAADRAGVPAVQRNQ 159 (398)
T ss_dssp HHHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHHTCCEEEECC
T ss_pred hcccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCEEEECchhhHHHHHHHHcCCCEEEEec
Confidence 001111111 111122222334444555544 999999998888888999999999887543
Q ss_pred chHHHHHHHhcccccccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHhhhcccEEEeccccccc
Q 011381 148 TTAMALSFLFHLPELDVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQYLLAAGIMVNSFMELE 227 (487)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le 227 (487)
..... ..+ ....+......+.. ...........+......+.
T Consensus 160 ~~~~~---------------------------~~~--------~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~ 201 (398)
T 3oti_A 160 SAWRT---------------------------RGM--------HRSIASFLTDLMDK---HQVSLPEPVATIESFPPSLL 201 (398)
T ss_dssp TTCCC---------------------------TTH--------HHHHHTTCHHHHHH---TTCCCCCCSEEECSSCGGGG
T ss_pred cCCCc---------------------------cch--------hhHHHHHHHHHHHH---cCCCCCCCCeEEEeCCHHHC
Confidence 21000 000 00000000110000 00000111222222222221
Q ss_pred chHHHHhhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCC--CHHHHHHHHHHHH
Q 011381 228 TGPFKALMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTL--SQEQLNELALGLE 305 (487)
Q Consensus 228 ~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~ 305 (487)
.. .. .. .. ++.++ +... ......|+...+++++|||++||.... ..+.+..++++++
T Consensus 202 ~~-----~~-~~--~~-~~~~~----~~~~--------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 3oti_A 202 LE-----AE-PE--GW-FMRWV----PYGG--------GAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAG 260 (398)
T ss_dssp TT-----SC-CC--SB-CCCCC----CCCC--------CEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHH
T ss_pred CC-----CC-CC--CC-Ccccc----CCCC--------CcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHH
Confidence 11 00 00 00 11111 1011 344456777666678999999998432 5667888999999
Q ss_pred HcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhHHHH
Q 011381 306 MSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILES 385 (487)
Q Consensus 306 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~ea 385 (487)
+.+.+++|+.+.... +.+..+++ |+++.+|+|+.++|++++ +||||||.||++||
T Consensus 261 ~~~~~~v~~~g~~~~--------------~~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea 315 (398)
T 3oti_A 261 EVDADFVLALGDLDI--------------SPLGTLPR---------NVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTA 315 (398)
T ss_dssp TSSSEEEEECTTSCC--------------GGGCSCCT---------TEEEESSCCHHHHHTTCS--EEEECCCHHHHHHH
T ss_pred cCCCEEEEEECCcCh--------------hhhccCCC---------cEEEEccCCHHHHHhhCC--EEEECCCHHHHHHH
Confidence 999999999887532 12233443 899999999999999999 99999999999999
Q ss_pred HhhCCceecccccccchhhh--HhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcC
Q 011381 386 IVHGVPIIAWPLYSEQKMNA--VLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALS 463 (487)
Q Consensus 386 l~~GvP~v~~P~~~DQ~~na--~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~ 463 (487)
+++|+|+|++|...||+.|| .++++ .|+|+.++..+ .+++.|. ++|+| ++|+++++++++.+.+
T Consensus 316 l~~G~P~v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~~~---~~~~~l~----~ll~~---~~~~~~~~~~~~~~~~--- 381 (398)
T 3oti_A 316 IDAGIPQLLAPDPRDQFQHTAREAVSR-RGIGLVSTSDK---VDADLLR----RLIGD---ESLRTAAREVREEMVA--- 381 (398)
T ss_dssp HHHTCCEEECCCTTCCSSCTTHHHHHH-HTSEEECCGGG---CCHHHHH----HHHHC---HHHHHHHHHHHHHHHT---
T ss_pred HHhCCCEEEcCCCchhHHHHHHHHHHH-CCCEEeeCCCC---CCHHHHH----HHHcC---HHHHHHHHHHHHHHHh---
Confidence 99999999999999999999 99999 99999998776 7888877 78888 9999999999999985
Q ss_pred CCCChHHHHHHHHH
Q 011381 464 PDGSSTKSLAQLAR 477 (487)
Q Consensus 464 ~~g~~~~~~~~~~~ 477 (487)
..+..+.++.+.+
T Consensus 382 -~~~~~~~~~~l~~ 394 (398)
T 3oti_A 382 -LPTPAETVRRIVE 394 (398)
T ss_dssp -SCCHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHH
Confidence 5566666655544
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.9e-33 Score=282.33 Aligned_cols=355 Identities=17% Similarity=0.128 Sum_probs=228.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeC-CCCC-CC-----
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFL-PPVS-FD----- 83 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~----- 83 (487)
+|||+|++.++.||++|++.|+++|.++ ||+|++++++.. ...... .++.+..+ +... ..
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~-GheV~v~~~~~~----------~~~~~~--~g~~~~~~~~~~~~~~~~~~~ 67 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS-GHEVLIAAPPEL----------QATAHG--AGLTTAGIRGNDRTGDTGGTT 67 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT-TCEEEEEECHHH----------HHHHHH--BTCEEEEC-------------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC-CCEEEEecChhh----------HHHHHh--CCCceeeecCCccchhhhhhh
Confidence 4899999999999999999999999765 999999987522 222222 25777776 3211 00
Q ss_pred CCC--------CCcchHHH-HHHHHHHh---HHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEEecchHH
Q 011381 84 DLP--------DDFQIETR-ITLTLVRS---LSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTAM 151 (487)
Q Consensus 84 ~~~--------~~~~~~~~-~~~~~~~~---~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 151 (487)
... ........ +....... .+.....+.+++++++||+||+|...+++..+|+.+|||++.+......
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 68 QLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp -CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred cccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 000 00011111 11111111 0011233344444559999999987888888999999998876433100
Q ss_pred HHHHHhcccccccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHhhh-----cccEEEecccccc
Q 011381 152 ALSFLFHLPELDVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQYL-----LAAGIMVNSFMEL 226 (487)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~-----~~~~~l~~s~~~l 226 (487)
. .. .. ......++......+. ..+..+.....++
T Consensus 148 ~---------------------------~~-----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (391)
T 3tsa_A 148 T---------------------------AG-----------PF---SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSL 186 (391)
T ss_dssp T---------------------------TT-----------HH---HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGG
T ss_pred c---------------------------cc-----------cc---cchHHHHHHHHHHHcCCCCCCCCceEEEecChhh
Confidence 0 00 00 0001111111111111 1123333333333
Q ss_pred cchHHHHhhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcC---CCHHHHHHHHHH
Q 011381 227 ETGPFKALMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGT---LSQEQLNELALG 303 (487)
Q Consensus 227 e~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~---~~~~~~~~~~~a 303 (487)
+... +. ....+.++ | ... +.....|+...+++++||+++||... .....+..++++
T Consensus 187 ~~~~-----~~----~~~~~~~~-p---~~~--------~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 187 QASD-----AP----QGAPVQYV-P---YNG--------SGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp SCTT-----SC----CCEECCCC-C---CCC--------CEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred cCCC-----CC----ccCCeeee-c---CCC--------CcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 2210 00 00011222 1 110 33445677765668899999999732 236678888888
Q ss_pred HHHc-CCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCchhH
Q 011381 304 LEMS-GQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSI 382 (487)
Q Consensus 304 l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~ 382 (487)
++. +.+++|+.+.... +.+..++ .|+++.+|+|+.++|++++ +||||||.||+
T Consensus 246 -~~~p~~~~v~~~~~~~~--------------~~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~ 299 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPEHR--------------ALLTDLP---------DNARIAESVPLNLFLRTCE--LVICAGGSGTA 299 (391)
T ss_dssp -HTSTTEEEEEECCGGGG--------------GGCTTCC---------TTEEECCSCCGGGTGGGCS--EEEECCCHHHH
T ss_pred -ccCCCeEEEEEECCcch--------------hhcccCC---------CCEEEeccCCHHHHHhhCC--EEEeCCCHHHH
Confidence 877 7788888776432 1222333 3899999999999999999 99999999999
Q ss_pred HHHHhhCCceecccccccchhhhHhhhcccceeEEEee--cCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHH
Q 011381 383 LESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKV--NENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAAN 460 (487)
Q Consensus 383 ~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~--~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~ 460 (487)
+||+++|+|+|++|...||+.|+.++++ .|+|+.++. .+ .+++.|.++++++|+| ++++++++++++.+.+
T Consensus 300 ~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~---~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 300 FTATRLGIPQLVLPQYFDQFDYARNLAA-AGAGICLPDEQAQ---SDHEQFTDSIATVLGD---TGFAAAAIKLSDEITA 372 (391)
T ss_dssp HHHHHTTCCEEECCCSTTHHHHHHHHHH-TTSEEECCSHHHH---TCHHHHHHHHHHHHTC---THHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCEEecCCcccHHHHHHHHHH-cCCEEecCccccc---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999 999999987 65 7899999999999999 8999999999999984
Q ss_pred hcCCCCChHHHHHHHHH
Q 011381 461 ALSPDGSSTKSLAQLAR 477 (487)
Q Consensus 461 ~~~~~g~~~~~~~~~~~ 477 (487)
.++..+.++.+.+
T Consensus 373 ----~~~~~~~~~~i~~ 385 (391)
T 3tsa_A 373 ----MPHPAALVRTLEN 385 (391)
T ss_dssp ----SCCHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHH
Confidence 5666666665544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=4.3e-31 Score=266.85 Aligned_cols=366 Identities=16% Similarity=0.147 Sum_probs=238.1
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCC------
Q 011381 7 KQIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPV------ 80 (487)
Q Consensus 7 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 80 (487)
++..+|||++++.++.||++|++.|+++|+++ ||+|+|++++.. ...... .++.+..++..
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~~----------~~~~~~--~g~~~~~~~~~~~~~~~ 82 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEGF----------AGTLRK--LGFEPVATGMPVFDGFL 82 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGGG----------HHHHHH--TTCEEEECCCCHHHHHH
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHHH----------HHHHHh--cCCceeecCcccccchh
Confidence 45568999999999999999999999999775 999999997632 222222 25788877630
Q ss_pred -------CCCCCCC-C-cchHHHHHHHHHHh-HHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEEecchH
Q 011381 81 -------SFDDLPD-D-FQIETRITLTLVRS-LSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVFFTTTA 150 (487)
Q Consensus 81 -------~~~~~~~-~-~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~ 150 (487)
.....+. . ......+...+... ...+...+.+++++.+||+||+|....++..+|+.+|||+|.......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~ 162 (412)
T 3otg_A 83 AALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRD 162 (412)
T ss_dssp HHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCC
T ss_pred hhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEeccccc
Confidence 0000000 0 00000111111111 111122233333444999999998777777899999999887543211
Q ss_pred HHHHHHhcccccccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHh----------hhcccEEEe
Q 011381 151 MALSFLFHLPELDVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQ----------YLLAAGIMV 220 (487)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~----------~~~~~~~l~ 220 (487)
.. ++. .......+.+.... ....+.++.
T Consensus 163 ~~---------------------------~~~---------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~ 200 (412)
T 3otg_A 163 TP---------------------------DDL---------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFID 200 (412)
T ss_dssp CC---------------------------SHH---------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEE
T ss_pred Cc---------------------------hhh---------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEe
Confidence 00 000 00000111111111 112233444
Q ss_pred cccccccchHHHHhhcccCCCCCCCeEeeCcCcCCCCCCCCCCCCccchhhc-ccCCCCCeEEEEEeCCCcCCCHHHHHH
Q 011381 221 NSFMELETGPFKALMEGESSFKPPPVYPVGPLIQTGSNNETNNDRSLECLKW-LDEQPSESVLFVCFGSGGTLSQEQLNE 299 (487)
Q Consensus 221 ~s~~~le~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~ 299 (487)
.+...++.... .+ . ..-..+-+..... ..+...| ....+++++||+++||......+.+..
T Consensus 201 ~~~~~~~~~~~-~~-------~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~ 262 (412)
T 3otg_A 201 IFPPSLQEPEF-RA-------R-PRRHELRPVPFAE---------QGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRA 262 (412)
T ss_dssp CSCGGGSCHHH-HT-------C-TTEEECCCCCCCC---------CCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHH
T ss_pred eCCHHhcCCcc-cC-------C-CCcceeeccCCCC---------CCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHH
Confidence 44333332211 00 0 1111111111110 2233456 232345779999999986556778888
Q ss_pred HHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccccCc
Q 011381 300 LALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGW 379 (487)
Q Consensus 300 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~ 379 (487)
+++++++.+.+++|+.+.... .+.+..+++ |+.+.+|+|+.++|++++ +||+|||.
T Consensus 263 ~~~~l~~~~~~~~~~~g~~~~-------------~~~l~~~~~---------~v~~~~~~~~~~~l~~ad--~~v~~~g~ 318 (412)
T 3otg_A 263 AIDGLAGLDADVLVASGPSLD-------------VSGLGEVPA---------NVRLESWVPQAALLPHVD--LVVHHGGS 318 (412)
T ss_dssp HHHHHHTSSSEEEEECCSSCC-------------CTTCCCCCT---------TEEEESCCCHHHHGGGCS--EEEESCCH
T ss_pred HHHHHHcCCCEEEEEECCCCC-------------hhhhccCCC---------cEEEeCCCCHHHHHhcCc--EEEECCch
Confidence 999999889999998886531 122333443 799999999999999999 99999999
Q ss_pred hhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Q 011381 380 NSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAA 459 (487)
Q Consensus 380 gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~ 459 (487)
||++||+++|+|+|++|...||..|+..+++ .|+|..++..+ ++++.|.+++.++|+| +++++++.+.++.+.
T Consensus 319 ~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~ 391 (412)
T 3otg_A 319 GTTLGALGAGVPQLSFPWAGDSFANAQAVAQ-AGAGDHLLPDN---ISPDSVSGAAKRLLAE---ESYRAGARAVAAEIA 391 (412)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECCGGG---CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCccc---CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 99999999876 8999999999999999 899999999999988
Q ss_pred HhcCCCCChHHHHHHHHHHHh
Q 011381 460 NALSPDGSSTKSLAQLARIWK 480 (487)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~l~ 480 (487)
+ .++.++.++.+.+.+.
T Consensus 392 ~----~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 392 A----MPGPDEVVRLLPGFAS 408 (412)
T ss_dssp H----SCCHHHHHTTHHHHHC
T ss_pred c----CCCHHHHHHHHHHHhc
Confidence 5 5577777776666554
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=8e-27 Score=231.43 Aligned_cols=340 Identities=14% Similarity=0.077 Sum_probs=203.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCCCCcch
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLPDDFQI 91 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (487)
.||++...++-||++|.++||++|.++ ||+|+|+++... ...++.+. .++.+..++....... .....
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~g--------~e~~~v~~--~g~~~~~i~~~~~~~~-~~~~~ 70 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPRG--------IENDLVPK--AGLPLHLIQVSGLRGK-GLKSL 70 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSSS--------THHHHTGG--GTCCEEECC-------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCch--------Hhhchhhh--cCCcEEEEECCCcCCC-CHHHH
Confidence 389999888889999999999999765 999999987643 12333332 2577777764322110 00111
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchHH--HHHHHhCCCcEEEecchHHHHHHHhcccccccccccc
Q 011381 92 ETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAAF--DVANEVGVPAYVFFTTTAMALSFLFHLPELDVKFSCE 169 (487)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~--~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (487)
....... ..........++++ +||+||++..+.+.+ .+|+.+|||+++.-..
T Consensus 71 ~~~~~~~-~~~~~~~~~~l~~~----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n--------------------- 124 (365)
T 3s2u_A 71 VKAPLEL-LKSLFQALRVIRQL----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN--------------------- 124 (365)
T ss_dssp --CHHHH-HHHHHHHHHHHHHH----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS---------------------
T ss_pred HHHHHHH-HHHHHHHHHHHHhc----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc---------------------
Confidence 1111111 12223333445554 999999987665544 5788899998752100
Q ss_pred cCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHhhhcccEEEecccccccchHHHHhhcccCCCCCCCeEee
Q 011381 170 YRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQYLLAAGIMVNSFMELETGPFKALMEGESSFKPPPVYPV 249 (487)
Q Consensus 170 ~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~~~~v 249 (487)
.+|++.. +.. .+.++.+ ..++++.-. .....+++
T Consensus 125 --------~~~G~~n----------------------r~l--~~~a~~v-~~~~~~~~~-------------~~~k~~~~ 158 (365)
T 3s2u_A 125 --------AVAGTAN----------------------RSL--APIARRV-CEAFPDTFP-------------ASDKRLTT 158 (365)
T ss_dssp --------SSCCHHH----------------------HHH--GGGCSEE-EESSTTSSC-------------C---CEEC
T ss_pred --------hhhhhHH----------------------Hhh--cccccee-eeccccccc-------------CcCcEEEE
Confidence 0122100 000 1112222 222221110 11356777
Q ss_pred CcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcC----CceEEEEeCCCcccccc
Q 011381 250 GPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSG----QRFLWVAKSPHEEAANA 325 (487)
Q Consensus 250 Gpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~ 325 (487)
|+........ +.. ......+++++|+|..||... ....+.+.++++... ..++|..+....
T Consensus 159 g~pvr~~~~~------~~~--~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~----- 223 (365)
T 3s2u_A 159 GNPVRGELFL------DAH--ARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGRQHA----- 223 (365)
T ss_dssp CCCCCGGGCC------CTT--SSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCTTTH-----
T ss_pred CCCCchhhcc------chh--hhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCcccc-----
Confidence 7654332111 111 111222346689998888643 233445666776553 456777665432
Q ss_pred ccccccCCCCCCCCCchhHHHhh--cCCCceeccCCCc-ccccccCcccccccccCchhHHHHHhhCCceeccccc----
Q 011381 326 TYFSVQSMKDPLDFLPKGFLDRT--KGVGLVVPSWAPQ-AQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY---- 398 (487)
Q Consensus 326 ~~~~~~~~~~~~~~lp~~~~~~~--~~~~v~~~~~~pq-~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~---- 398 (487)
+...+.+ .+.++.+.+|+++ .++|+.+| ++|||+|.+|++|++++|+|+|.+|+.
T Consensus 224 ----------------~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~ 285 (365)
T 3s2u_A 224 ----------------EITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAID 285 (365)
T ss_dssp ----------------HHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----C
T ss_pred ----------------ccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCC
Confidence 2222222 2347888899998 57999999 999999999999999999999999974
Q ss_pred ccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q 011381 399 SEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARI 478 (487)
Q Consensus 399 ~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 478 (487)
.+|..||+.+++ .|+|+.++.++ ++++.|.++|.++|+| ++.++++.+-++.+. ...+.++.++.+.+-
T Consensus 286 ~~Q~~NA~~l~~-~G~a~~l~~~~---~~~~~L~~~i~~ll~d---~~~~~~m~~~a~~~~----~~~aa~~ia~~i~~l 354 (365)
T 3s2u_A 286 DHQTRNAEFLVR-SGAGRLLPQKS---TGAAELAAQLSEVLMH---PETLRSMADQARSLA----KPEATRTVVDACLEV 354 (365)
T ss_dssp CHHHHHHHHHHT-TTSEEECCTTT---CCHHHHHHHHHHHHHC---THHHHHHHHHHHHTC----CTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH-CCCEEEeecCC---CCHHHHHHHHHHHHCC---HHHHHHHHHHHHhcC----CccHHHHHHHHHHHH
Confidence 489999999999 99999998887 9999999999999999 554444433333332 344555555555444
Q ss_pred H
Q 011381 479 W 479 (487)
Q Consensus 479 l 479 (487)
.
T Consensus 355 a 355 (365)
T 3s2u_A 355 A 355 (365)
T ss_dssp C
T ss_pred H
Confidence 3
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=5.2e-27 Score=207.12 Aligned_cols=161 Identities=25% Similarity=0.419 Sum_probs=137.5
Q ss_pred ccchhhcccCCCCCeEEEEEeCCCc-CCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhH
Q 011381 266 SLECLKWLDEQPSESVLFVCFGSGG-TLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGF 344 (487)
Q Consensus 266 ~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~ 344 (487)
+.++.+|++..+++++|||++||.. ....+.+..+++++++.+.+++|+.+.... ..+++
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-----------------~~~~~-- 68 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP-----------------DTLGL-- 68 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-----------------TTCCT--
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-----------------ccCCC--
Confidence 7889999987666789999999985 456778889999999989999999876422 12333
Q ss_pred HHhhcCCCceeccCCCcccccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCC
Q 011381 345 LDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENG 424 (487)
Q Consensus 345 ~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 424 (487)
|+.+.+|+||.++|.|+.+++||||||+||++||+++|+|+|++|...||+.||.++++ .|+|+.++..+
T Consensus 69 -------~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~-- 138 (170)
T 2o6l_A 69 -------NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNT-- 138 (170)
T ss_dssp -------TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTT--
T ss_pred -------cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecccc--
Confidence 79999999999999554444999999999999999999999999999999999999999 99999998776
Q ss_pred ccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Q 011381 425 LVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAA 459 (487)
Q Consensus 425 ~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~ 459 (487)
++.+.|.++|+++++| ++|+++++++++.++
T Consensus 139 -~~~~~l~~~i~~ll~~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 139 -MSSTDLLNALKRVIND---PSYKENVMKLSRIQH 169 (170)
T ss_dssp -CCHHHHHHHHHHHHHC---HHHHHHHHHHC----
T ss_pred -CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHhh
Confidence 8999999999999999 899999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.83 E-value=1.2e-18 Score=172.54 Aligned_cols=339 Identities=14% Similarity=0.115 Sum_probs=205.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCCCCcch
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLPDDFQI 91 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (487)
|||++++.+..||..+.+.|+++|+++ ||+|+++++... ........ .++.+..++.... ... ..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~--------~~~~~~~~--~g~~~~~~~~~~~---~~~-~~ 71 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADR--------MEADLVPK--HGIEIDFIRISGL---RGK-GI 71 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTS--------THHHHGGG--GTCEEEECCCCCC---TTC-CH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc-CCEEEEEecCCc--------chhhhccc--cCCceEEecCCcc---CcC-cc
Confidence 799999988889999999999999765 999999987643 11122221 2567766654321 111 11
Q ss_pred HHHHHHH--HHHhHHHHHHHHHHHhccCCceEEEeCCCc--chHHHHHHHhCCCcEEEecchHHHHHHHhcccccccccc
Q 011381 92 ETRITLT--LVRSLSSLRDALKVLAESTRLVALVVDPFG--SAAFDVANEVGVPAYVFFTTTAMALSFLFHLPELDVKFS 167 (487)
Q Consensus 92 ~~~~~~~--~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 167 (487)
...+... .......+...+++ .+||+|+++... ..+..++..+|+|+++.....
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~l~~----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------------ 129 (364)
T 1f0k_A 72 KALIAAPLRIFNAWRQARAIMKA----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------------ 129 (364)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHH----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC------------------
Confidence 1111100 11122333344444 499999998643 234467888999987532110
Q ss_pred cccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHhhhcccEEEecccccccchHHHHhhcccCCCCCCCeE
Q 011381 168 CEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQYLLAAGIMVNSFMELETGPFKALMEGESSFKPPPVY 247 (487)
Q Consensus 168 ~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~~~ 247 (487)
+++. .. +. .....+.++..+- .. + |++.
T Consensus 130 -----------~~~~-------------------~~---~~--~~~~~d~v~~~~~-~~--------------~--~~~~ 157 (364)
T 1f0k_A 130 -----------IAGL-------------------TN---KW--LAKIATKVMQAFP-GA--------------F--PNAE 157 (364)
T ss_dssp -----------SCCH-------------------HH---HH--HTTTCSEEEESST-TS--------------S--SSCE
T ss_pred -----------CCcH-------------------HH---HH--HHHhCCEEEecCh-hh--------------c--CCce
Confidence 0110 00 00 0122344443321 11 1 2345
Q ss_pred eeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHc--CCceEEEEeCCCcccccc
Q 011381 248 PVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMS--GQRFLWVAKSPHEEAANA 325 (487)
Q Consensus 248 ~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~ 325 (487)
++|+......-. .......+...+++++|++..|+.. .......++++++.. +.++++..+....
T Consensus 158 ~i~n~v~~~~~~------~~~~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~~----- 224 (364)
T 1f0k_A 158 VVGNPVRTDVLA------LPLPQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGSQ----- 224 (364)
T ss_dssp ECCCCCCHHHHT------SCCHHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTCH-----
T ss_pred EeCCccchhhcc------cchhhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCchH-----
Confidence 555432211000 0011111222233567777777753 345556666777765 3455666665321
Q ss_pred ccccccCCCCCCCCCchhHHHhh---cCCCceeccCCCc-ccccccCcccccccccCchhHHHHHhhCCceeccccc---
Q 011381 326 TYFSVQSMKDPLDFLPKGFLDRT---KGVGLVVPSWAPQ-AQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY--- 398 (487)
Q Consensus 326 ~~~~~~~~~~~~~~lp~~~~~~~---~~~~v~~~~~~pq-~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~--- 398 (487)
+.+.+.+ .-.+|.+.+|+++ ..+++.++ ++|+++|.+++.||+++|+|+|+.|..
T Consensus 225 ----------------~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 225 ----------------QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp ----------------HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTT
T ss_pred ----------------HHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCc
Confidence 2222222 2247999999955 77999999 999999989999999999999999998
Q ss_pred ccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q 011381 399 SEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARI 478 (487)
Q Consensus 399 ~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 478 (487)
.||..|+..+.+ .|.|..++..+ .+++.+.++|.++ | ++.+++..+-+.+.. +..+.++.++.+.+.
T Consensus 287 ~~q~~~~~~~~~-~g~g~~~~~~d---~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 353 (364)
T 1f0k_A 287 RQQYWNALPLEK-AGAAKIIEQPQ---LSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRV 353 (364)
T ss_dssp CHHHHHHHHHHH-TTSEEECCGGG---CCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHh-CCcEEEecccc---CCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHH
Confidence 799999999999 89999988766 7899999999988 6 666665555444332 466777777777777
Q ss_pred HhcCC
Q 011381 479 WKNPE 483 (487)
Q Consensus 479 l~~~~ 483 (487)
+++..
T Consensus 354 y~~~~ 358 (364)
T 1f0k_A 354 ARALE 358 (364)
T ss_dssp HTTC-
T ss_pred HHHHH
Confidence 66554
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=1.2e-15 Score=138.07 Aligned_cols=136 Identities=16% Similarity=0.155 Sum_probs=96.0
Q ss_pred CCCeEEEEEeCCCcCCCHHHHHHH-----HHHHHHcC-CceEEEEeCCCccccccccccccCCCCCCCC-----------
Q 011381 277 PSESVLFVCFGSGGTLSQEQLNEL-----ALGLEMSG-QRFLWVAKSPHEEAANATYFSVQSMKDPLDF----------- 339 (487)
Q Consensus 277 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 339 (487)
+++++|||+.||... -.+.+..+ ++++...+ .++++.++.... +....
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~--------------~~~~~~~~~~~~~~~~ 90 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS--------------SEFEHLVQERGGQRES 90 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC--------------CCCCSHHHHHTCEECS
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch--------------hhHHHHHHhhhccccc
Confidence 346799999999732 23333333 48887777 789999887532 00000
Q ss_pred --CchhH------HH----hhcCCCceeccCCCcc-cccc-cCcccccccccCchhHHHHHhhCCceeccccc----ccc
Q 011381 340 --LPKGF------LD----RTKGVGLVVPSWAPQA-QVLS-HGSTGGFLSHCGWNSILESIVHGVPIIAWPLY----SEQ 401 (487)
Q Consensus 340 --lp~~~------~~----~~~~~~v~~~~~~pq~-~iL~-~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~----~DQ 401 (487)
+|.+. .. .-...++.+.+|+++. ++|+ .++ ++|||||+||++|++++|+|+|++|.. .||
T Consensus 91 ~l~p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ 168 (224)
T 2jzc_A 91 QKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQ 168 (224)
T ss_dssp CCCSSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHH
T ss_pred cccccccccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchH
Confidence 11000 00 0011245678898885 7999 999 999999999999999999999999984 369
Q ss_pred hhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHh
Q 011381 402 KMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGL 438 (487)
Q Consensus 402 ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~v 438 (487)
..||+++++ .|+++.+ +++.|.++|+++
T Consensus 169 ~~nA~~l~~-~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 169 QQIADKFVE-LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp HHHHHHHHH-HSCCCEE--------CSCTTTHHHHHH
T ss_pred HHHHHHHHH-CCCEEEc--------CHHHHHHHHHHH
Confidence 999999999 9999765 345677777766
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.47 E-value=1.1e-12 Score=123.83 Aligned_cols=117 Identities=12% Similarity=0.083 Sum_probs=90.6
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhc-CCCceecc
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTK-GVGLVVPS 357 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~~~~ 357 (487)
.+.|+|++|... .......+++++.+.. ++..+++.+.. ..+.+....+ ..|+.+..
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~-------------------~~~~l~~~~~~~~~v~v~~ 214 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP-------------------NLKKLQKFAKLHNNIRLFI 214 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT-------------------THHHHHHHHHTCSSEEEEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch-------------------HHHHHHHHHhhCCCEEEEe
Confidence 568999999753 2335667788876654 56666666432 2233332222 34899999
Q ss_pred CCCcc-cccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeec
Q 011381 358 WAPQA-QVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVN 421 (487)
Q Consensus 358 ~~pq~-~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 421 (487)
|+++. ++++.++ ++|++|| +|+.|+++.|+|+|++|...+|..||+.+++ .|++..+..-
T Consensus 215 ~~~~m~~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~~ 275 (282)
T 3hbm_A 215 DHENIAKLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKYL 275 (282)
T ss_dssp SCSCHHHHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGGG
T ss_pred CHHHHHHHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcchh
Confidence 99885 6999999 9999999 8999999999999999999999999999999 9999988754
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.32 E-value=3.7e-10 Score=112.18 Aligned_cols=350 Identities=12% Similarity=0.036 Sum_probs=186.3
Q ss_pred CCcEEEEEcC--C--CccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHH--HHHhhcCCCCceEEeCCCCCCC
Q 011381 10 PRAYVAMVPT--P--GIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTI--RQVLESLPTSISTIFLPPVSFD 83 (487)
Q Consensus 10 ~~~~il~~~~--~--~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 83 (487)
++|||++++. + ..|.-.-...|++.| + ||+|++++.... .. ..... ..++....++.....
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~-g~~v~v~~~~~~--------~~~~~~~~~--~~~~~~~~~~~~~~~ 69 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D-PESIVVFASTQN--------AEEAHAYDK--TLDYEVIRWPRSVML 69 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C-GGGEEEEEECSS--------HHHHHHHHT--TCSSEEEEESSSSCC
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--c-CCeEEEEECCCC--------ccchhhhcc--ccceEEEEccccccc
Confidence 5788999874 3 467788899999999 4 999999998754 12 22222 335666666542110
Q ss_pred CCCCCcchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcch--HHHHHHHhCCCcEEEecchHHHHHHHhcccc
Q 011381 84 DLPDDFQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSA--AFDVANEVGVPAYVFFTTTAMALSFLFHLPE 161 (487)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~ 161 (487)
. .. .....+...++ +.+||+|++...... ...++..+++|.+++..-.....
T Consensus 70 --~----~~--------~~~~~l~~~~~----~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------- 123 (394)
T 3okp_A 70 --P----TP--------TTAHAMAEIIR----EREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG-------- 123 (394)
T ss_dssp --S----CH--------HHHHHHHHHHH----HTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH--------
T ss_pred --c----ch--------hhHHHHHHHHH----hcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh--------
Confidence 0 00 11122333344 449999997654433 33568889999554322211100
Q ss_pred cccccccccCCCCCcccCCCCcccCCCCCCCcccccchhHHHHHHHHHHhhhcccEEEecccccccchHHHHhhcccCCC
Q 011381 162 LDVKFSCEYRDMPEPVQLPGCVPVHGRDFADGFQQRKNEAYRFLLSFSKQYLLAAGIMVNSFMELETGPFKALMEGESSF 241 (487)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~ 241 (487)
... ....+.+.+. .+..++.++..|-... +.+.....
T Consensus 124 -----------------~~~-----------------~~~~~~~~~~--~~~~~d~ii~~s~~~~-----~~~~~~~~-- 160 (394)
T 3okp_A 124 -----------------WSM-----------------LPGSRQSLRK--IGTEVDVLTYISQYTL-----RRFKSAFG-- 160 (394)
T ss_dssp -----------------HTT-----------------SHHHHHHHHH--HHHHCSEEEESCHHHH-----HHHHHHHC--
T ss_pred -----------------hhh-----------------cchhhHHHHH--HHHhCCEEEEcCHHHH-----HHHHHhcC--
Confidence 000 0011111111 1344566666553221 11221110
Q ss_pred CCCCeEeeCcCcCCCCCCCCCCCCccchhhcccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHc-----CCceEEEEe
Q 011381 242 KPPPVYPVGPLIQTGSNNETNNDRSLECLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMS-----GQRFLWVAK 316 (487)
Q Consensus 242 ~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~ 316 (487)
...++..+.+-.....-..........+.+-+.- +++..+++..|+.. ..+.+..++++++.+ +.+++ .++
T Consensus 161 ~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~~l~-i~G 236 (394)
T 3okp_A 161 SHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGF-TDTTPVIACNSRLV--PRKGQDSLIKAMPQVIAARPDAQLL-IVG 236 (394)
T ss_dssp SSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSC--GGGCHHHHHHHHHHHHHHSTTCEEE-EEC
T ss_pred CCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCC-CcCceEEEEEeccc--cccCHHHHHHHHHHHHhhCCCeEEE-EEc
Confidence 1124555544332221110000001122222222 22336677778752 334455566665544 33433 344
Q ss_pred CCCccccccccccccCCCCCCCCCchhHHHhhc--CCCceeccCCCccc---ccccCccccccc-----------ccCch
Q 011381 317 SPHEEAANATYFSVQSMKDPLDFLPKGFLDRTK--GVGLVVPSWAPQAQ---VLSHGSTGGFLS-----------HCGWN 380 (487)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~v~~~~~~pq~~---iL~~~~~~~~I~-----------HgG~g 380 (487)
.+.. .+.+..... ..+|.+.+|+|+.+ ++..++ ++|. -|..+
T Consensus 237 ~g~~--------------------~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e~~~~ 294 (394)
T 3okp_A 237 SGRY--------------------ESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVEGLGI 294 (394)
T ss_dssp CCTT--------------------HHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCCSSCH
T ss_pred CchH--------------------HHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC--EEEecCccccccccccccCc
Confidence 3211 122221111 24789999998644 678888 6665 56667
Q ss_pred hHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHH-HHHHHH
Q 011381 381 SILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRA-LKDAAA 459 (487)
Q Consensus 381 t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~-l~~~~~ 459 (487)
++.||+++|+|+|+.+. ......+.+ |.|..++.. +.+++.++|.+++++ +..+++..+ ..+.++
T Consensus 295 ~~~Ea~a~G~PvI~~~~----~~~~e~i~~--~~g~~~~~~-----d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 295 VYLEAQACGVPVIAGTS----GGAPETVTP--ATGLVVEGS-----DVDKLSELLIELLDD---PIRRAAMGAAGRAHVE 360 (394)
T ss_dssp HHHHHHHTTCCEEECSS----TTGGGGCCT--TTEEECCTT-----CHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCC----CChHHHHhc--CCceEeCCC-----CHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHH
Confidence 99999999999999664 334444555 478777654 589999999999998 444333322 223333
Q ss_pred HhcCCCCChHHHHHHHHHHHhcCCCC
Q 011381 460 NALSPDGSSTKSLAQLARIWKNPEFE 485 (487)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~l~~~~~~ 485 (487)
+.-+.+...+++.+.+++..++
T Consensus 361 ----~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 361 ----AEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp ----HHTBHHHHHHHHHHHHHSCCC-
T ss_pred ----HhCCHHHHHHHHHHHHHHhccC
Confidence 2457778888888888877654
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.28 E-value=9.6e-10 Score=111.02 Aligned_cols=95 Identities=12% Similarity=0.038 Sum_probs=67.7
Q ss_pred CCceeccCCCc---ccccccCcccccccc----cCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCC
Q 011381 351 VGLVVPSWAPQ---AQVLSHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNEN 423 (487)
Q Consensus 351 ~~v~~~~~~pq---~~iL~~~~~~~~I~H----gG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 423 (487)
.+|.+.+++|+ ..++..++ ++|.- |..+++.||+++|+|+|+.+. ......+.+ -+.|+.++..
T Consensus 306 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~~-- 376 (438)
T 3c48_A 306 KRIRFLDPRPPSELVAVYRAAD--IVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAE-GETGLLVDGH-- 376 (438)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCB-TTTEEEESSC--
T ss_pred CcEEEcCCCChHHHHHHHHhCC--EEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhC-CCcEEECCCC--
Confidence 57899999986 45788899 66643 335689999999999998654 445556666 6688888654
Q ss_pred CccCHHHHHHHHHHhccCch-hHHHHHHHHHHHHH
Q 011381 424 GLVGREDIANYAKGLIQGEE-GKLLRKKMRALKDA 457 (487)
Q Consensus 424 ~~~~~~~l~~av~~vl~~~~-~~~~~~~a~~l~~~ 457 (487)
+.+++.++|.+++++.+ -..+.+++++..+.
T Consensus 377 ---d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 377 ---SPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp ---CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 58999999999999832 12344444444433
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.22 E-value=6.1e-10 Score=110.20 Aligned_cols=108 Identities=16% Similarity=0.127 Sum_probs=76.7
Q ss_pred CCceeccCCCc---ccccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccC
Q 011381 351 VGLVVPSWAPQ---AQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 427 (487)
Q Consensus 351 ~~v~~~~~~pq---~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 427 (487)
.+|.+.+++++ ..+++.++ +||+.+| |.+.||+++|+|+|+.+..++++.. .+ .|.|+.++ .+
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~-~g~g~lv~------~d 320 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LK-AGILKLAG------TD 320 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HH-HTSEEECC------SC
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hc-CCceEECC------CC
Confidence 47888866655 57899999 9999884 4466999999999998876666652 45 58887774 26
Q ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Q 011381 428 REDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIW 479 (487)
Q Consensus 428 ~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 479 (487)
++.|.+++.++++| +..+++..+.+ +....+++.++.++.+.+.+
T Consensus 321 ~~~la~~i~~ll~d---~~~~~~~~~~~----~~~~~~~~~~~i~~~i~~~~ 365 (376)
T 1v4v_A 321 PEGVYRVVKGLLEN---PEELSRMRKAK----NPYGDGKAGLMVARGVAWRL 365 (376)
T ss_dssp HHHHHHHHHHHHTC---HHHHHHHHHSC----CSSCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC---hHhhhhhcccC----CCCCCChHHHHHHHHHHHHh
Confidence 89999999999998 65554444322 22334566666666655544
No 28
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.16 E-value=1.6e-10 Score=114.75 Aligned_cols=161 Identities=11% Similarity=0.068 Sum_probs=97.1
Q ss_pred CCeEEEEEeCCCcCCCHHHHHHHHHHHHHc-----CCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhc-CC
Q 011381 278 SESVLFVCFGSGGTLSQEQLNELALGLEMS-----GQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTK-GV 351 (487)
Q Consensus 278 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~ 351 (487)
+++.++++.|...... +.+..++++++.. +..+++..+.+.. +-+.+.+..+ ..
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~-------------------~~~~l~~~~~~~~ 263 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNPN-------------------VREPVNRILGHVK 263 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHH-------------------HHHHHHHHHTTCT
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCHH-------------------HHHHHHHHhhcCC
Confidence 3567888888754322 3455666666543 3344443232110 1111211112 24
Q ss_pred CceeccCCCc---ccccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccCH
Q 011381 352 GLVVPSWAPQ---AQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGR 428 (487)
Q Consensus 352 ~v~~~~~~pq---~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 428 (487)
+|.+.+++++ ..+++.++ +||+.+| |.+.||+++|+|+|+.+..++.. .+.+ .|.|+.++. ++
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~-~g~g~lv~~------d~ 329 (384)
T 1vgv_A 264 NVILIDPQEYLPFVWLMNHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVT-AGTVRLVGT------DK 329 (384)
T ss_dssp TEEEECCCCHHHHHHHHHHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHH-HTSEEEECS------SH
T ss_pred CEEEeCCCCHHHHHHHHHhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhh-CCceEEeCC------CH
Confidence 7888666664 56789999 8999885 45889999999999998744433 2345 588888753 58
Q ss_pred HHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Q 011381 429 EDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIW 479 (487)
Q Consensus 429 ~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 479 (487)
+++.+++.++++| ++.+++..+ ..++. ..+++.++.++.+.+.+
T Consensus 330 ~~la~~i~~ll~d---~~~~~~~~~---~~~~~-~~~~~~~~i~~~~~~~~ 373 (384)
T 1vgv_A 330 QRIVEEVTRLLKD---ENEYQAMSR---AHNPY-GDGQACSRILEALKNNR 373 (384)
T ss_dssp HHHHHHHHHHHHC---HHHHHHHHS---SCCTT-CCSCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC---hHHHhhhhh---ccCCC-cCCCHHHHHHHHHHHHH
Confidence 9999999999998 554443322 22221 24555555555554433
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.13 E-value=8.9e-09 Score=103.63 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=76.7
Q ss_pred CCceeccCCCcc---cccccCccccccc----ccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCC
Q 011381 351 VGLVVPSWAPQA---QVLSHGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNEN 423 (487)
Q Consensus 351 ~~v~~~~~~pq~---~iL~~~~~~~~I~----HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 423 (487)
.++.+.+|+|+. .++..++ ++|. -|-.+++.||+++|+|+|+-.. ......+.. |.|..++..
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~~-- 380 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKAG-- 380 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEECTT--
T ss_pred CEEEEcCCCCHHHHHHHHHHCC--EEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeCCC--
Confidence 456678989985 4688888 5552 2445689999999999998653 444444445 688888764
Q ss_pred CccCHHHHHHHHHHhcc-Cch-hHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCC
Q 011381 424 GLVGREDIANYAKGLIQ-GEE-GKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKNPE 483 (487)
Q Consensus 424 ~~~~~~~l~~av~~vl~-~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~ 483 (487)
+.+++.++|.++++ +.+ ...+.+++++.. + .-+.+...+++.+.+++..
T Consensus 381 ---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~----~----~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 381 ---DPGELANAILKALELSRSDLSKFRENCKKRA----M----SFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH----H----TSCHHHHHHHHHHHHHTCS
T ss_pred ---CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH----h----hCcHHHHHHHHHHHHHHHH
Confidence 58999999999998 632 233444444333 2 3577777777777766654
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.12 E-value=4.1e-10 Score=112.52 Aligned_cols=110 Identities=14% Similarity=0.091 Sum_probs=80.3
Q ss_pred CCceeccCCC---cccccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccC
Q 011381 351 VGLVVPSWAP---QAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 427 (487)
Q Consensus 351 ~~v~~~~~~p---q~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 427 (487)
.++++.++++ ...+++.++ ++|+-.|. .+.||+++|+|+|++|-..+++. +.+ .|.|+.++ .+
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad--~vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~-~g~~~lv~------~d 347 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSY--LVFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIE-AGTLKLIG------TN 347 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEE--EEEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHH-HTSEEECC------SC
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCcc-HHHHHHHhCCCEEEecCCCcchh----hee-CCcEEEcC------CC
Confidence 5788888886 356888999 89988752 23699999999999976666654 235 68887765 35
Q ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhc
Q 011381 428 REDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKN 481 (487)
Q Consensus 428 ~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 481 (487)
+++|.+++.+++++ +..++++.+-+. ....++++++.++.+.+.+..
T Consensus 348 ~~~l~~ai~~ll~~---~~~~~~m~~~~~----~~g~~~aa~rI~~~l~~~l~~ 394 (403)
T 3ot5_A 348 KENLIKEALDLLDN---KESHDKMAQAAN----PYGDGFAANRILAAIKSHFEE 394 (403)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHHHSCC----TTCCSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcC---HHHHHHHHhhcC----cccCCcHHHHHHHHHHHHhCC
Confidence 89999999999998 666655443222 234677888888877776653
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.12 E-value=6.7e-10 Score=110.77 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=71.8
Q ss_pred CCceeccCCC---cccccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccC
Q 011381 351 VGLVVPSWAP---QAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 427 (487)
Q Consensus 351 ~~v~~~~~~p---q~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 427 (487)
.++.+.++++ ...+++.++ ++|+-.| |.+.||+++|+|+|++.-..+++. +.+ .|.++.++ .+
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~-~G~~~lv~------~d 353 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVA-AGTVKLVG------TN 353 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHH-HTSEEECT------TC
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHH-cCceEEcC------CC
Confidence 4788877764 356888999 9999887 656799999999999855555432 345 58776553 25
Q ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 011381 428 REDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQL 475 (487)
Q Consensus 428 ~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 475 (487)
+++|.+++.++++| +..++++.+-... ...++++++.++.+
T Consensus 354 ~~~l~~ai~~ll~d---~~~~~~m~~~~~~----~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 354 QQQICDALSLLLTD---PQAYQAMSQAHNP----YGDGKACQRIADIL 394 (396)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHHTSCCT----TCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---HHHHHHHhhccCC----CcCChHHHHHHHHH
Confidence 89999999999998 6665554433222 23455655555443
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.12 E-value=4.6e-09 Score=104.72 Aligned_cols=112 Identities=17% Similarity=0.190 Sum_probs=75.8
Q ss_pred CCCceeccCCCcc---cccccCccccccc----ccCc-hhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeec
Q 011381 350 GVGLVVPSWAPQA---QVLSHGSTGGFLS----HCGW-NSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVN 421 (487)
Q Consensus 350 ~~~v~~~~~~pq~---~iL~~~~~~~~I~----HgG~-gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 421 (487)
..+|.+.+++|+. .++..++ ++|. +.|. +++.||+++|+|+|+.+. ......+.+ .+.|..++..
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~~ 334 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSAD--VYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLAD-GDAGRLVPVD 334 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSS--EEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTT-TTSSEECCTT
T ss_pred cCcEEEEecCCHHHHHHHHHHCC--EEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcC-CCceEEeCCC
Confidence 3579999999974 7888899 5553 3344 489999999999998765 455666666 5778877654
Q ss_pred CCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHh
Q 011381 422 ENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWK 480 (487)
Q Consensus 422 ~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 480 (487)
+.+++.++|.+++++ +..+++..+- .++... .-+.+...+++.+.++
T Consensus 335 -----d~~~l~~~i~~l~~~---~~~~~~~~~~---~~~~~~-~~s~~~~~~~~~~~~~ 381 (406)
T 2gek_A 335 -----DADGMAAALIGILED---DQLRAGYVAR---ASERVH-RYDWSVVSAQIMRVYE 381 (406)
T ss_dssp -----CHHHHHHHHHHHHHC---HHHHHHHHHH---HHHHGG-GGBHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHcC---HHHHHHHHHH---HHHHHH-hCCHHHHHHHHHHHHH
Confidence 589999999999988 5544333222 222222 3455555555554444
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.11 E-value=9.6e-09 Score=105.69 Aligned_cols=79 Identities=18% Similarity=0.022 Sum_probs=59.7
Q ss_pred CCceeccCCCcc---cccccC----ccccccc----ccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEe
Q 011381 351 VGLVVPSWAPQA---QVLSHG----STGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVK 419 (487)
Q Consensus 351 ~~v~~~~~~pq~---~iL~~~----~~~~~I~----HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 419 (487)
.+|.+.+++|+. .++..+ + ++|. -|-..++.||+++|+|+|+... ......+.. -+.|+.++
T Consensus 335 ~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~-~~~g~l~~ 407 (499)
T 2r60_A 335 GKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDG-GKYGVLVD 407 (499)
T ss_dssp TTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGG-GTSSEEEC
T ss_pred ceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcC-CceEEEeC
Confidence 468899999864 467778 8 6652 2334589999999999998764 344555556 45788887
Q ss_pred ecCCCccCHHHHHHHHHHhccC
Q 011381 420 VNENGLVGREDIANYAKGLIQG 441 (487)
Q Consensus 420 ~~~~~~~~~~~l~~av~~vl~~ 441 (487)
.. +.+++.++|.+++++
T Consensus 408 ~~-----d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 408 PE-----DPEDIARGLLKAFES 424 (499)
T ss_dssp TT-----CHHHHHHHHHHHHSC
T ss_pred CC-----CHHHHHHHHHHHHhC
Confidence 54 589999999999998
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.09 E-value=1e-07 Score=94.65 Aligned_cols=114 Identities=17% Similarity=0.169 Sum_probs=76.7
Q ss_pred CCceeccCCCc-ccccccCcccccc----cccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCc
Q 011381 351 VGLVVPSWAPQ-AQVLSHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGL 425 (487)
Q Consensus 351 ~~v~~~~~~pq-~~iL~~~~~~~~I----~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 425 (487)
.+|.+.++..+ ..++..++ ++| ..|..+++.||+++|+|+|+.+.. .....+.+ -+.|+.++..
T Consensus 267 ~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~-~~~g~~~~~~---- 335 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQH-GDTGYLCEVG---- 335 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCB-TTTEEEECTT----
T ss_pred CeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhc-CCceEEeCCC----
Confidence 46777776544 56888898 777 556677999999999999987653 34445555 5678877654
Q ss_pred cCHHHHHHHHHHhccCchhHHHHHHH-HHHHHHHHHhcCCCCChHHHHHHHHHHHhcCC
Q 011381 426 VGREDIANYAKGLIQGEEGKLLRKKM-RALKDAAANALSPDGSSTKSLAQLARIWKNPE 483 (487)
Q Consensus 426 ~~~~~l~~av~~vl~~~~~~~~~~~a-~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~ 483 (487)
+.+++.++|.++++| +..+++. ++..+.+. +.-+.+...+++.+.+++..
T Consensus 336 -d~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 336 -DTTGVADQAIQLLKD---EELHRNMGERARESVY----EQFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp -CHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HHSCHHHHHHHHHHHHHHTC
T ss_pred -CHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHHHHH
Confidence 589999999999998 5433332 22222332 24566666666666665544
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.99 E-value=3.3e-09 Score=104.71 Aligned_cols=108 Identities=16% Similarity=0.107 Sum_probs=73.1
Q ss_pred CCceeccCCCc---ccccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccC
Q 011381 351 VGLVVPSWAPQ---AQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 427 (487)
Q Consensus 351 ~~v~~~~~~pq---~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 427 (487)
.+|.+.+++++ ..+++.++ +||+..| +.+.||+++|+|+|+.+..+..+ .+.+ .|.|+.++. +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~-~g~g~~v~~------d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIE-AGTLKLAGT------D 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHH-TTSEEECCS------C
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeec-CCceEEcCC------C
Confidence 57888777765 46788899 8998764 56889999999999885433332 2344 578887752 5
Q ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Q 011381 428 REDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIW 479 (487)
Q Consensus 428 ~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 479 (487)
++++.+++.++++| ++.+++.. +..++. ..+.+.++.++.+.+.+
T Consensus 329 ~~~la~~i~~ll~~---~~~~~~~~---~~~~~~-~~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 329 EETIFSLADELLSD---KEAHDKMS---KASNPY-GDGRASERIVEAILKHF 373 (375)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHC---CCCCTT-CCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC---hHhHhhhh---hcCCCC-CCCcHHHHHHHHHHHHh
Confidence 89999999999998 65544332 222222 23566666666655544
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.92 E-value=6.3e-07 Score=88.00 Aligned_cols=129 Identities=13% Similarity=0.174 Sum_probs=87.0
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCC----c-eEEEEeCCCccccccccccccCCCCCCCCCchhHHH---hhc-
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQ----R-FLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD---RTK- 349 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~- 349 (487)
+..+++..|+.. ..+.+..++++++.... + -++.++.+.. +.+.+ +..
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---------------------~~~~~~~~~~~~ 251 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---------------------RKFEALAEKLGV 251 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---------------------HHHHHHHHHHTC
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---------------------HHHHHHHHHcCC
Confidence 346677778753 34556778888877642 2 2344444211 22222 111
Q ss_pred CCCceeccCCCc-ccccccCccccccc----ccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCC
Q 011381 350 GVGLVVPSWAPQ-AQVLSHGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENG 424 (487)
Q Consensus 350 ~~~v~~~~~~pq-~~iL~~~~~~~~I~----HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 424 (487)
..+|.+.++..+ ..++..++ ++|. -|..+++.||+++|+|+|+.+. ..+...+++ .+.|..++..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~~~--- 321 (374)
T 2iw1_A 252 RSNVHFFSGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIAD-ANCGTVIAEP--- 321 (374)
T ss_dssp GGGEEEESCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHH-HTCEEEECSS---
T ss_pred CCcEEECCCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhcc-CCceEEeCCC---
Confidence 247888887554 55788888 6664 5667899999999999999765 445667777 7889888632
Q ss_pred ccCHHHHHHHHHHhccC
Q 011381 425 LVGREDIANYAKGLIQG 441 (487)
Q Consensus 425 ~~~~~~l~~av~~vl~~ 441 (487)
-+.+++.+++.++++|
T Consensus 322 -~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 322 -FSQEQLNEVLRKALTQ 337 (374)
T ss_dssp -CCHHHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHHHHcC
Confidence 3689999999999998
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.83 E-value=7.6e-08 Score=93.66 Aligned_cols=126 Identities=16% Similarity=0.171 Sum_probs=79.6
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCc
Q 011381 282 LFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQ 361 (487)
Q Consensus 282 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq 361 (487)
+++..|+.. ..+.+..++++++..+.++++ +|.... ...+ ..+..+.. .+|.+.+|+|+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~~----------------~~~l-~~~~~~~~-~~v~~~g~~~~ 222 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAWE----------------PEYF-DEITRRYG-STVEPIGEVGG 222 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCCC----------------HHHH-HHHHHHHT-TTEEECCCCCH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCccc----------------HHHH-HHHHHHhC-CCEEEeccCCH
Confidence 444567653 455678888888888766544 443211 0001 11222223 68999999997
Q ss_pred c---cccccCcccccc--cc------------cCchhHHHHHhhCCceecccccccchhhhHhhhcc-cceeEEEeecCC
Q 011381 362 A---QVLSHGSTGGFL--SH------------CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDD-LKVSFRVKVNEN 423 (487)
Q Consensus 362 ~---~iL~~~~~~~~I--~H------------gG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~-~G~G~~l~~~~~ 423 (487)
. .++..++ ++| +. |-.+++.||+++|+|+|+.... .+...+++. -+.|+.++.
T Consensus 223 ~~l~~~~~~ad--v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~~~g~~~~~--- 293 (342)
T 2iuy_A 223 ERRLDLLASAH--AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGEVVGYGTDF--- 293 (342)
T ss_dssp HHHHHHHHHCS--EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEEECCSSSCC---
T ss_pred HHHHHHHHhCC--EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCCCceEEcCC---
Confidence 5 6888899 555 22 3346899999999999998753 333333330 134554442
Q ss_pred CccCHHHHHHHHHHhcc
Q 011381 424 GLVGREDIANYAKGLIQ 440 (487)
Q Consensus 424 ~~~~~~~l~~av~~vl~ 440 (487)
+.+++.++|.++++
T Consensus 294 ---d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 294 ---APDEARRTLAGLPA 307 (342)
T ss_dssp ---CHHHHHHHHHTSCC
T ss_pred ---CHHHHHHHHHHHHH
Confidence 48999999999886
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.80 E-value=4e-09 Score=104.48 Aligned_cols=160 Identities=14% Similarity=0.068 Sum_probs=96.0
Q ss_pred CeEEEEEeCCCcCCC-HHHHHHHHHHHHHc----CCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHh---h-c
Q 011381 279 ESVLFVCFGSGGTLS-QEQLNELALGLEMS----GQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDR---T-K 349 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~ 349 (487)
++.++++.|...+.. .+.+..+++++.+. +..+|+....... +.+.+. . .
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~---------------------~~l~~~~~~~~~ 261 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTK---------------------KRLEDLEGFKEL 261 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHH---------------------HHHHTSGGGGGT
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHH---------------------HHHHHHHHHhcC
Confidence 568888887654333 24566777777654 5666765432111 001000 1 1
Q ss_pred CCCceeccCCC---cccccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCcc
Q 011381 350 GVGLVVPSWAP---QAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLV 426 (487)
Q Consensus 350 ~~~v~~~~~~p---q~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 426 (487)
..++++.+..+ ...++++++ ++|+-.|. .+.||..+|+|+|+++...+.+. .++ .|.++.++ .
T Consensus 262 ~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~-~G~~~lv~------~ 327 (385)
T 4hwg_A 262 GDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPALNIREAHERPE----GMD-AGTLIMSG------F 327 (385)
T ss_dssp GGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHH-HTCCEECC------S
T ss_pred CCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhh-cCceEEcC------C
Confidence 23677765554 356899999 99998875 46899999999999987554222 245 58776664 3
Q ss_pred CHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Q 011381 427 GREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIW 479 (487)
Q Consensus 427 ~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 479 (487)
++++|.+++.++|+|+ ..++++.+-...+ ++.++++++.++.+.+.+
T Consensus 328 d~~~i~~ai~~ll~d~---~~~~~m~~~~~~~---~g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 328 KAERVLQAVKTITEEH---DNNKRTQGLVPDY---NEAGLVSKKILRIVLSYV 374 (385)
T ss_dssp SHHHHHHHHHHHHTTC---BTTBCCSCCCHHH---HTCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCh---HHHHHhhccCCCC---CCCChHHHHHHHHHHHHh
Confidence 6899999999999873 2221111111112 035777777666665543
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.70 E-value=5.6e-06 Score=82.67 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=75.3
Q ss_pred CCceeccCCC---c---ccccccCcccccccc----cCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEee
Q 011381 351 VGLVVPSWAP---Q---AQVLSHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKV 420 (487)
Q Consensus 351 ~~v~~~~~~p---q---~~iL~~~~~~~~I~H----gG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 420 (487)
.+|.+.+|++ + ..+++.++ ++|.- |..+++.||+++|+|+|+.+. ..+...+.+ -+.|..++
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~~- 364 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLVR- 364 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEES-
T ss_pred CcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEEC-
Confidence 5788888775 2 45777888 66643 345689999999999999664 456666666 67888775
Q ss_pred cCCCccCHHHHHHHHHHhccCchhHHHHHHHHH-HHHHHHHhcCCCCChHHHHHHHHHHHhc
Q 011381 421 NENGLVGREDIANYAKGLIQGEEGKLLRKKMRA-LKDAAANALSPDGSSTKSLAQLARIWKN 481 (487)
Q Consensus 421 ~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~-l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 481 (487)
+.+++.++|.++++| +..+++..+ ..+.+. +.-+.+...+++.+.+++
T Consensus 365 ------d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~----~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 ------DANEAVEVVLYLLKH---PEVSKEMGAKAKERVR----KNFIITKHMERYLDILNS 413 (416)
T ss_dssp ------SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HHTBHHHHHHHHHHHHHT
T ss_pred ------CHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHH----HHcCHHHHHHHHHHHHHH
Confidence 378999999999998 554433322 222333 245666777777766654
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.62 E-value=1.2e-06 Score=94.20 Aligned_cols=77 Identities=13% Similarity=0.116 Sum_probs=53.4
Q ss_pred CCceeccCCC----cccccc----cCccccccc----ccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEE
Q 011381 351 VGLVVPSWAP----QAQVLS----HGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRV 418 (487)
Q Consensus 351 ~~v~~~~~~p----q~~iL~----~~~~~~~I~----HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l 418 (487)
.+|.+.++.+ +.++.. .++ +||. -|-..++.||+++|+|+|+- |-......+.+ -+.|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~d-g~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVH-GKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCB-TTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHcc-CCcEEEe
Confidence 4677777544 344433 455 5552 34456899999999999985 45556666666 6688888
Q ss_pred eecCCCccCHHHHHHHHHHhc
Q 011381 419 KVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 419 ~~~~~~~~~~~~l~~av~~vl 439 (487)
+.. +++.+.++|.+++
T Consensus 713 ~p~-----D~e~LA~aI~~lL 728 (816)
T 3s28_A 713 DPY-----HGDQAADTLADFF 728 (816)
T ss_dssp CTT-----SHHHHHHHHHHHH
T ss_pred CCC-----CHHHHHHHHHHHH
Confidence 764 5889999997776
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.43 E-value=1.4e-05 Score=81.60 Aligned_cols=112 Identities=9% Similarity=-0.037 Sum_probs=74.4
Q ss_pred CCce-eccCCCc--ccccccCccccccc----ccCchhHHHHHhhCCceecccccccchhhhHhhhccc---------ce
Q 011381 351 VGLV-VPSWAPQ--AQVLSHGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDL---------KV 414 (487)
Q Consensus 351 ~~v~-~~~~~pq--~~iL~~~~~~~~I~----HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~ 414 (487)
.+|. +.++... ..+++.++ ++|. -|...++.||+++|+|+|+... ..+...+.+ - +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGAD--VILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCC--EEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-Cccccccccccc
Confidence 4675 6777332 25788888 6662 2445688999999999998754 345555555 3 57
Q ss_pred eEEEeecCCCccCHHHHHHHHHHhc---cCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCC
Q 011381 415 SFRVKVNENGLVGREDIANYAKGLI---QGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKNPE 483 (487)
Q Consensus 415 G~~l~~~~~~~~~~~~l~~av~~vl---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~ 483 (487)
|..++.. +++++.++|.+++ +| +..+++.. +..++ +.-+-+..++++.+.+++..
T Consensus 420 G~l~~~~-----d~~~la~~i~~ll~~~~~---~~~~~~~~---~~~~~---~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 420 GFVFEDS-----NAWSLLRAIRRAFVLWSR---PSLWRFVQ---RQAMA---MDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp BEEECSS-----SHHHHHHHHHHHHHHHTS---HHHHHHHH---HHHHH---CCCCHHHHHHHHHHHHHHHC
T ss_pred eEEECCC-----CHHHHHHHHHHHHHHcCC---HHHHHHHH---HHHHh---hcCCHHHHHHHHHHHHHHhh
Confidence 8888754 5899999999999 66 55443332 22222 46777777777776665543
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.41 E-value=2.8e-05 Score=79.24 Aligned_cols=109 Identities=10% Similarity=0.005 Sum_probs=73.0
Q ss_pred CCce-eccCCCcc---cccccCcccccc----cccCchhHHHHHhhCCceecccccccchhhhHhhhccc---------c
Q 011381 351 VGLV-VPSWAPQA---QVLSHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDL---------K 413 (487)
Q Consensus 351 ~~v~-~~~~~pq~---~iL~~~~~~~~I----~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G 413 (487)
.+|. +.++ +.. .+++.++ ++| .-|-..++.||+++|+|+|+... ......+.+ - +
T Consensus 346 ~~v~~~~g~-~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~ 417 (485)
T 1rzu_A 346 GRVGVAIGY-NEPLSHLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAA 417 (485)
T ss_dssp TTEEEEESC-CHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCC
T ss_pred CcEEEecCC-CHHHHHHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCC
Confidence 4676 6777 443 5788888 666 23445689999999999998664 345555555 4 6
Q ss_pred eeEEEeecCCCccCHHHHHHHHHHhc---cCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhc
Q 011381 414 VSFRVKVNENGLVGREDIANYAKGLI---QGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKN 481 (487)
Q Consensus 414 ~G~~l~~~~~~~~~~~~l~~av~~vl---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 481 (487)
.|..++.. +.+++.++|.+++ +| +..+++. ++..++ +.-+.+...+++.+.+++
T Consensus 418 ~G~l~~~~-----d~~~la~~i~~ll~~~~~---~~~~~~~---~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 418 TGVQFSPV-----TLDGLKQAIRRTVRYYHD---PKLWTQM---QKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp CBEEESSC-----SHHHHHHHHHHHHHHHTC---HHHHHHH---HHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred cceEeCCC-----CHHHHHHHHHHHHHHhCC---HHHHHHH---HHHHHH---HhCChHHHHHHHHHHHHH
Confidence 78888654 5899999999999 67 5444333 222222 466777766666665543
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.32 E-value=9.7e-05 Score=73.42 Aligned_cols=110 Identities=7% Similarity=-0.007 Sum_probs=69.4
Q ss_pred ceeccCCCc---ccccccCcccccc----cccCchhHHHHHhhCCceecccccccchhhhHhhhcccc------------
Q 011381 353 LVVPSWAPQ---AQVLSHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLK------------ 413 (487)
Q Consensus 353 v~~~~~~pq---~~iL~~~~~~~~I----~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G------------ 413 (487)
+.+.+|+|+ ..++..++ ++| .-|...++.||+++|+|+|+-... .....+.+ -.
T Consensus 256 v~~~g~~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~-~~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACD--VIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSG-DCVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCT-TTSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCC--EEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHcc-Cccccccccccccc
Confidence 667799985 44677888 665 234456899999999999986543 33333333 11
Q ss_pred ---eeE--EEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhc
Q 011381 414 ---VSF--RVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKN 481 (487)
Q Consensus 414 ---~G~--~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 481 (487)
.|+ .+... +.+++.++| +++++ +..+++..+-+... ..+.-+.+...+++.+.+++
T Consensus 329 ~~~~G~~gl~~~~-----d~~~la~~i-~l~~~---~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 329 DDRDGIGGIEGII-----DVDDLVEAF-TFFKD---EKNRKEYGKRVQDF---VKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp TTTCSSCCEEEEC-----CHHHHHHHH-HHTTS---HHHHHHHHHHHHHH---HTTSCCHHHHHHHHHHHHHH
T ss_pred ccccCcceeeCCC-----CHHHHHHHH-HHhcC---HHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHH
Confidence 155 55543 599999999 99998 55544333322222 22456777766666655544
No 44
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.24 E-value=3.2e-06 Score=73.80 Aligned_cols=129 Identities=10% Similarity=0.044 Sum_probs=85.8
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHHcC-CceEEEEeCCCccccccccccccCCCCCCCCCchhHHH--h-hcCCCceec
Q 011381 281 VLFVCFGSGGTLSQEQLNELALGLEMSG-QRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD--R-TKGVGLVVP 356 (487)
Q Consensus 281 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~-~~~~~v~~~ 356 (487)
.+++..|+.. ..+.+..++++++..+ .++++ ++.... ...+- .+.. + --..+|.+.
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i-~G~~~~----------------~~~l~-~~~~~~~~~l~~~v~~~ 83 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYI-VGWFSK----------------GDHAE-RYARKIMKIAPDNVKFL 83 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEE-EBCCCT----------------TSTHH-HHHHHHHHHSCTTEEEE
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEE-EecCcc----------------HHHHH-HHHHhhhcccCCcEEEe
Confidence 4455667653 3556778889988884 44443 443221 01111 1111 1 113489999
Q ss_pred cCCCc---ccccccCccccccc---ccC-chhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccCHH
Q 011381 357 SWAPQ---AQVLSHGSTGGFLS---HCG-WNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGRE 429 (487)
Q Consensus 357 ~~~pq---~~iL~~~~~~~~I~---HgG-~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 429 (487)
+|+|+ ..++..++ ++|. +.| ..++.||+++|+|+|+... ..+...+.+ .+.|+.+ . -+.+
T Consensus 84 g~~~~~e~~~~~~~ad--i~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~-----~d~~ 150 (177)
T 2f9f_A 84 GSVSEEELIDLYSRCK--GLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV-N-----ADVN 150 (177)
T ss_dssp ESCCHHHHHHHHHHCS--EEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE-C-----SCHH
T ss_pred CCCCHHHHHHHHHhCC--EEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe-C-----CCHH
Confidence 99997 56888899 6665 334 4489999999999998653 556666766 6788887 3 3699
Q ss_pred HHHHHHHHhccCc
Q 011381 430 DIANYAKGLIQGE 442 (487)
Q Consensus 430 ~l~~av~~vl~~~ 442 (487)
++.++|.+++++.
T Consensus 151 ~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 151 EIIDAMKKVSKNP 163 (177)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCH
Confidence 9999999999873
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.22 E-value=0.00023 Score=70.83 Aligned_cols=74 Identities=9% Similarity=-0.012 Sum_probs=56.1
Q ss_pred CCceeccCCCcc---cccccCccccccc---c-cCchhHHHHH-------hhCCceecccccccchhhhHhhhcccceeE
Q 011381 351 VGLVVPSWAPQA---QVLSHGSTGGFLS---H-CGWNSILESI-------VHGVPIIAWPLYSEQKMNAVLLTDDLKVSF 416 (487)
Q Consensus 351 ~~v~~~~~~pq~---~iL~~~~~~~~I~---H-gG~gt~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 416 (487)
.+|.+.+++|+. .+++.++ ++|. + |-.+++.||+ ++|+|+|+-.. +.. -..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~ad--v~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHAR--FGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcC--EEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-CcceE
Confidence 378999999864 4678888 5542 2 3345789999 99999999765 555 45677
Q ss_pred E-EeecCCCccCHHHHHHHHHHhccCc
Q 011381 417 R-VKVNENGLVGREDIANYAKGLIQGE 442 (487)
Q Consensus 417 ~-l~~~~~~~~~~~~l~~av~~vl~~~ 442 (487)
. ++.. +++++.++|.++++++
T Consensus 332 l~v~~~-----d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 332 FGYTPG-----NADSVIAAITQALEAP 353 (406)
T ss_dssp EEECTT-----CHHHHHHHHHHHHHCC
T ss_pred EEeCCC-----CHHHHHHHHHHHHhCc
Confidence 6 6654 5899999999999873
No 46
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.15 E-value=0.00061 Score=70.78 Aligned_cols=117 Identities=14% Similarity=0.064 Sum_probs=71.5
Q ss_pred CCceeccCCCc---ccccccCcccccc---cccCchhHHHHHhhCCceecccccccch-hhhHhhhcccceeEEEeecCC
Q 011381 351 VGLVVPSWAPQ---AQVLSHGSTGGFL---SHCGWNSILESIVHGVPIIAWPLYSEQK-MNAVLLTDDLKVSFRVKVNEN 423 (487)
Q Consensus 351 ~~v~~~~~~pq---~~iL~~~~~~~~I---~HgG~gt~~eal~~GvP~v~~P~~~DQ~-~na~~v~~~~G~G~~l~~~~~ 423 (487)
.+|++.+++|+ ..++..++ +|| ..|+.+++.||+++|+|+|++|-..=.- .-+..+.. .|+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 57889999985 35688888 665 2266778999999999999987431111 11233334 45543332
Q ss_pred CccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHh
Q 011381 424 GLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWK 480 (487)
Q Consensus 424 ~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 480 (487)
-+.+.+.+++.++++| +..+++..+-+..... ..+..+.+...+.+.+.++
T Consensus 507 --~~~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 507 --ADDAAFVAKAVALASD---PAALTALHARVDVLRR-ASGVFHMDGFADDFGALLQ 557 (568)
T ss_dssp --SSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH-HSSTTCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHhcC---HHHHHHHHHHHHHhhh-cCCCCCHHHHHHHHHHHHH
Confidence 1689999999999998 5554443322222110 0245666666555554443
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.04 E-value=0.00071 Score=66.43 Aligned_cols=97 Identities=15% Similarity=0.214 Sum_probs=68.4
Q ss_pred CceeccCCCc-ccccccCccccccc-----ccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCc
Q 011381 352 GLVVPSWAPQ-AQVLSHGSTGGFLS-----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGL 425 (487)
Q Consensus 352 ~v~~~~~~pq-~~iL~~~~~~~~I~-----HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 425 (487)
++++.++..+ ..+++.++ +++. -+|..++.||+++|+|+|+-|...+.+.....+.+ .|.++.+ .
T Consensus 261 ~v~~~~~~~dl~~~y~~aD--v~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGK--IAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEE--EEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCC--EEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEe--C----
Confidence 4555565443 55788888 6443 13447899999999999987776776666665555 5776655 2
Q ss_pred cCHHHHHHHHHHhccCch-hHHHHHHHHHHHHHHH
Q 011381 426 VGREDIANYAKGLIQGEE-GKLLRKKMRALKDAAA 459 (487)
Q Consensus 426 ~~~~~l~~av~~vl~~~~-~~~~~~~a~~l~~~~~ 459 (487)
+++++.+++.++++| + -..+.+++++..+.-.
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 478999999999987 5 3567777777665543
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.48 E-value=0.00093 Score=56.91 Aligned_cols=126 Identities=13% Similarity=0.124 Sum_probs=74.1
Q ss_pred eEEEEEeCCCcCCCHHHHHHHHHHHHHcCC--ceEE-EEeCCCccccccccccccCCCCCCCCCchhHHHhhc--CCCce
Q 011381 280 SVLFVCFGSGGTLSQEQLNELALGLEMSGQ--RFLW-VAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTK--GVGLV 354 (487)
Q Consensus 280 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~v~ 354 (487)
+.+++..|... ..+.+..+++++..+.. ++-+ .++... ..+.+....+ +.++.
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--------------------~~~~~~~~~~~~~~~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGP--------------------DEKKIKLLAQKLGVKAE 59 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCST--------------------THHHHHHHHHHHTCEEE
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCc--------------------cHHHHHHHHHHcCCeEE
Confidence 36677777753 34556777777777632 3323 333221 1122222111 12677
Q ss_pred eccCCCcc---cccccCccccccc----ccCchhHHHHHhhCC-ceecccccccchhhhHhhhcccceeEEEeecCCCcc
Q 011381 355 VPSWAPQA---QVLSHGSTGGFLS----HCGWNSILESIVHGV-PIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLV 426 (487)
Q Consensus 355 ~~~~~pq~---~iL~~~~~~~~I~----HgG~gt~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 426 (487)
+ +|+|+. .++..++ ++|. -|...++.||+++|+ |+|+... .......+.. -+. .+.. -
T Consensus 60 ~-g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~~~-~~~--~~~~-----~ 125 (166)
T 3qhp_A 60 F-GFVNSNELLEILKTCT--LYVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFALD-ERS--LFEP-----N 125 (166)
T ss_dssp C-CCCCHHHHHHHHTTCS--EEEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGCSS-GGG--EECT-----T
T ss_pred E-eecCHHHHHHHHHhCC--EEEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhccC-Cce--EEcC-----C
Confidence 7 898864 4678888 6664 344569999999996 9999332 1222222333 233 3332 3
Q ss_pred CHHHHHHHHHHhccC
Q 011381 427 GREDIANYAKGLIQG 441 (487)
Q Consensus 427 ~~~~l~~av~~vl~~ 441 (487)
+.+++.+++.+++++
T Consensus 126 ~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 126 NAKDLSAKIDWWLEN 140 (166)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhC
Confidence 689999999999998
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.16 E-value=0.0024 Score=56.16 Aligned_cols=77 Identities=13% Similarity=0.022 Sum_probs=58.6
Q ss_pred Ccee-ccCCCc---ccccccCcccccccc----cCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCC
Q 011381 352 GLVV-PSWAPQ---AQVLSHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNEN 423 (487)
Q Consensus 352 ~v~~-~~~~pq---~~iL~~~~~~~~I~H----gG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 423 (487)
+|.+ .+++++ ..++..++ ++|.- |...++.||+++|+|+|+... ..+...+ . -+.|..++..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad--~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~~~-- 165 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKAG-- 165 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEECTT--
T ss_pred CEEEEeccCCHHHHHHHHHHCC--EEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEecCC--
Confidence 7888 999985 45788888 66532 334689999999999988754 3445555 5 6778877654
Q ss_pred CccCHHHHHHHHHHhcc-C
Q 011381 424 GLVGREDIANYAKGLIQ-G 441 (487)
Q Consensus 424 ~~~~~~~l~~av~~vl~-~ 441 (487)
+.+.+.++|.++++ +
T Consensus 166 ---~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 166 ---DPGELANAILKALELS 181 (200)
T ss_dssp ---CHHHHHHHHHHHHHCC
T ss_pred ---CHHHHHHHHHHHHhcC
Confidence 58999999999998 8
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.86 E-value=0.0065 Score=64.87 Aligned_cols=150 Identities=17% Similarity=0.196 Sum_probs=95.5
Q ss_pred CCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHh-----hcCC
Q 011381 277 PSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDR-----TKGV 351 (487)
Q Consensus 277 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-----~~~~ 351 (487)
++..++|.||.+..-++++.+....+-|++.+.-++|.+..+.. .-..+... +...
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-------------------~~~~l~~~~~~~gi~~~ 580 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-------------------GEPNIQQYAQNMGLPQN 580 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-------------------GHHHHHHHHHHTTCCGG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-------------------HHHHHHHHHHhcCCCcC
Confidence 34569999999888889999999999999999989998876432 01122211 2234
Q ss_pred CceeccCCCccc---ccccCccccccc---ccCchhHHHHHhhCCceecccccccch---hhhHhhhcccceeEEEeecC
Q 011381 352 GLVVPSWAPQAQ---VLSHGSTGGFLS---HCGWNSILESIVHGVPIIAWPLYSEQK---MNAVLLTDDLKVSFRVKVNE 422 (487)
Q Consensus 352 ~v~~~~~~pq~~---iL~~~~~~~~I~---HgG~gt~~eal~~GvP~v~~P~~~DQ~---~na~~v~~~~G~G~~l~~~~ 422 (487)
.+++.+..|..+ .+..+| +++. .+|.+|++|||..|||+|.+| ++++ .-+..+.. +|+.-.+-
T Consensus 581 r~~f~~~~~~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~--g~~~~sR~~~s~l~~-~gl~e~ia--- 652 (723)
T 4gyw_A 581 RIIFSPVAPKEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMP--GETLASRVAASQLTC-LGCLELIA--- 652 (723)
T ss_dssp GEEEEECCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCC--CSSGGGTHHHHHHHH-HTCGGGBC---
T ss_pred eEEECCCCCHHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEcc--CCCccHhHHHHHHHH-cCCccccc---
Confidence 577788888654 344566 7765 788999999999999999999 3332 22444445 56553222
Q ss_pred CCccCHHHHHHHHHHhccCchhHHHHHHHH-HHHHHHH
Q 011381 423 NGLVGREDIANYAKGLIQGEEGKLLRKKMR-ALKDAAA 459 (487)
Q Consensus 423 ~~~~~~~~l~~av~~vl~~~~~~~~~~~a~-~l~~~~~ 459 (487)
-+.++-.+..-++-+| +..++..+ +|++.+.
T Consensus 653 ---~~~~~Y~~~a~~la~d---~~~l~~lr~~l~~~~~ 684 (723)
T 4gyw_A 653 ---KNRQEYEDIAVKLGTD---LEYLKKVRGKVWKQRI 684 (723)
T ss_dssp ---SSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHH
Confidence 2344443333355556 44433332 3444443
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.79 E-value=0.0072 Score=62.24 Aligned_cols=145 Identities=12% Similarity=0.050 Sum_probs=90.3
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEE--eCCCccccccccccccCCCCCCCCCchhHH-HhhcCCCcee
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVA--KSPHEEAANATYFSVQSMKDPLDFLPKGFL-DRTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~~~~v~~ 355 (487)
+.++|.+|+...-..++.+....+-+++.+..++|.. +.... ....+-..+. ..+. ..+++
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g---------------~~~~~~~~~~~~GI~-~Rv~F 503 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG---------------ITHPYVERFIKSYLG-DSATA 503 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG---------------GGHHHHHHHHHHHHG-GGEEE
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch---------------hhHHHHHHHHHcCCC-ccEEE
Confidence 3589999999877889999999998989888888753 32211 0000101111 1122 35778
Q ss_pred ccCCCccccc---ccCcccccc---cccCchhHHHHHhhCCceecccccc-cchhhhHhhhcccceeEE-EeecCCCccC
Q 011381 356 PSWAPQAQVL---SHGSTGGFL---SHCGWNSILESIVHGVPIIAWPLYS-EQKMNAVLLTDDLKVSFR-VKVNENGLVG 427 (487)
Q Consensus 356 ~~~~pq~~iL---~~~~~~~~I---~HgG~gt~~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~G~~-l~~~~~~~~~ 427 (487)
.+.+|+.+.+ ..+| +|+ ..+|..|++|||++|||+|.++-.. --..-+..+.. .|+.-. +- -+
T Consensus 504 ~g~~p~~e~la~y~~aD--IfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d 574 (631)
T 3q3e_A 504 HPHSPYHQYLRILHNCD--MMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NT 574 (631)
T ss_dssp ECCCCHHHHHHHHHTCS--EEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SS
T ss_pred cCCCCHHHHHHHHhcCc--EEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CC
Confidence 8888876544 6677 544 2377899999999999999988432 11122333444 565431 21 25
Q ss_pred HHHHHHHHHHhccCchhHHHHHHH
Q 011381 428 REDIANYAKGLIQGEEGKLLRKKM 451 (487)
Q Consensus 428 ~~~l~~av~~vl~~~~~~~~~~~a 451 (487)
.++..+..-++.+| +..+++.
T Consensus 575 ~eeYv~~Av~La~D---~~~l~~L 595 (631)
T 3q3e_A 575 VDEYVERAVRLAEN---HQERLEL 595 (631)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHH
T ss_pred HHHHHHHHHHHhCC---HHHHHHH
Confidence 67777777788888 5544433
No 52
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.77 E-value=0.0019 Score=62.36 Aligned_cols=111 Identities=17% Similarity=0.151 Sum_probs=81.9
Q ss_pred CceeccCCCcccc---cccCcccccccccCc---------hhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEe
Q 011381 352 GLVVPSWAPQAQV---LSHGSTGGFLSHCGW---------NSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVK 419 (487)
Q Consensus 352 ~v~~~~~~pq~~i---L~~~~~~~~I~HgG~---------gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 419 (487)
||.+.+|+|+.++ |+.++.+++.+-+.. +-+.|+|++|+|+|+.+ ...++..+++ .|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 7999999998765 445566666533332 35789999999999754 5677888888 89999885
Q ss_pred ecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Q 011381 420 VNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIW 479 (487)
Q Consensus 420 ~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 479 (487)
+.+++.+++..+.. ++-..+++|+++.++.+++ +.-.++.+.+.+-+|
T Consensus 290 -------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp -------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 35788888887643 3346789999999999884 556666666665544
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.63 E-value=0.071 Score=51.44 Aligned_cols=107 Identities=15% Similarity=0.084 Sum_probs=66.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcC-CCEEEEEecCCCCCCCCchhHHHHHhhcCCCCce-EEeCCCCCCCCCCC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQY-NFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSIS-TIFLPPVSFDDLPD 87 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 87 (487)
..++|+++-..+.|++.=..++.++|.++. +.+|++++.+.+ ..+.+..+ .+. ++.++..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~----------~~l~~~~p-~vd~vi~~~~~------- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKL----------QQVMEYNP-NIDELIVVDKK------- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGG----------GGGTSSCT-TCSEEEEECCS-------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcch----------hHHHhcCC-CccEEEEeCcc-------
Confidence 357999999999999999999999997654 799999998743 33333333 232 3333321
Q ss_pred CcchHHHHHHHHHHhHHHHHHHHHHHhccCCc-eEEEeCCCcchHHHHHHHhCCCcEEE
Q 011381 88 DFQIETRITLTLVRSLSSLRDALKVLAESTRL-VALVVDPFGSAAFDVANEVGVPAYVF 145 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-D~VI~D~~~~~~~~~A~~lgIP~v~~ 145 (487)
.. ...+ ..+...++++ +..++ |++|.=....-...++...|+|..+-
T Consensus 69 ~~--~~~~--------~~~~~l~~~L-r~~~y~D~vidl~~~~rs~~l~~~~~a~~riG 116 (349)
T 3tov_A 69 GR--HNSI--------SGLNEVAREI-NAKGKTDIVINLHPNERTSYLAWKIHAPITTG 116 (349)
T ss_dssp SH--HHHH--------HHHHHHHHHH-HHHCCCCEEEECCCSHHHHHHHHHHCCSEEEE
T ss_pred cc--cccH--------HHHHHHHHHH-hhCCCCeEEEECCCChHHHHHHHHhCCCeEEe
Confidence 00 0111 1111222222 23489 99996554545556788889997653
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.29 E-value=0.24 Score=47.40 Aligned_cols=105 Identities=16% Similarity=0.199 Sum_probs=62.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcC-CCEEEEEecCCCCCCCCchhHHHHHhhcCCCCc-eEEeCCCCCCCCCCCCc
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQY-NFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSI-STIFLPPVSFDDLPDDF 89 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 89 (487)
|||+++.....|++.=...+.++|.++. +.+|++++.+.. ..+.+..+ .+ ....++.. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~----------~~l~~~~p-~i~~v~~~~~~------~~~ 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWC----------RPLLSRMP-EVNEAIPMPLG------HGA 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGG----------HHHHTTCT-TEEEEEEC------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcch----------hHHHhcCC-ccCEEEEecCC------ccc
Confidence 5899999888899988999999996544 799999998733 33444333 23 33344311 000
Q ss_pred chHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcchHHHHHHHhCCCcEEE
Q 011381 90 QIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGSAAFDVANEVGVPAYVF 145 (487)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~ 145 (487)
.....+.+..+. ++..+||++|.-.-......++...|+|..+.
T Consensus 64 -----------~~~~~~~~l~~~-l~~~~~D~vid~~~~~~sa~~~~~~~~~~~ig 107 (348)
T 1psw_A 64 -----------LEIGERRKLGHS-LREKRYDRAYVLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp ------------CHHHHHHHHHH-TTTTTCSEEEECSCCSGGGHHHHHTTCSEEEE
T ss_pred -----------cchHHHHHHHHH-HHhcCCCEEEECCCChHHHHHHHHhCCCEEec
Confidence 011112233333 34569999993222333446777789997543
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.35 E-value=0.013 Score=58.14 Aligned_cols=83 Identities=19% Similarity=0.010 Sum_probs=56.3
Q ss_pred CceeccCCCcc---cccccCccccccc--c--cCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCC
Q 011381 352 GLVVPSWAPQA---QVLSHGSTGGFLS--H--CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENG 424 (487)
Q Consensus 352 ~v~~~~~~pq~---~iL~~~~~~~~I~--H--gG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 424 (487)
+|.+.+++|+. .+++.++ +||. . |=..++.||+++|+|+|+ -..+ ....++. -..|+.++..
T Consensus 296 ~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~-~~~G~lv~~~--- 364 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNW-HSNIVSLEQL--- 364 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGT-BTTEEEESSC---
T ss_pred cEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhc-CCCEEEeCCC---
Confidence 68888999875 4677788 6553 2 223468999999999997 3222 2234445 4578877764
Q ss_pred ccCHHHHHHHHHHhccCchhHHHHHH
Q 011381 425 LVGREDIANYAKGLIQGEEGKLLRKK 450 (487)
Q Consensus 425 ~~~~~~l~~av~~vl~~~~~~~~~~~ 450 (487)
++++++++|.++++| +..+++
T Consensus 365 --d~~~la~ai~~ll~~---~~~~~~ 385 (413)
T 2x0d_A 365 --NPENIAETLVELCMS---FNNRDV 385 (413)
T ss_dssp --SHHHHHHHHHHHHHH---TC----
T ss_pred --CHHHHHHHHHHHHcC---HHHHHH
Confidence 589999999999987 444444
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.81 E-value=0.54 Score=48.11 Aligned_cols=167 Identities=10% Similarity=-0.027 Sum_probs=87.1
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHHc---CCceEEEEeCCCccccccccccccCCCCCCCCCchhHHH--hhcCCCcee
Q 011381 281 VLFVCFGSGGTLSQEQLNELALGLEMS---GQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD--RTKGVGLVV 355 (487)
Q Consensus 281 ~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~v~~ 355 (487)
++++..|... ..+.+..+++++.++ +.+++++ +.+.. .....+.. ..-..++.+
T Consensus 328 p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~-G~G~~------------------~~~~~~~~~~~~~~~~v~~ 386 (536)
T 3vue_A 328 PLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLL-GTGKK------------------KFEKLLKSMEEKYPGKVRA 386 (536)
T ss_dssp CEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEE-CCBCH------------------HHHHHHHHHHHHSTTTEEE
T ss_pred cEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEE-eccCc------------------hHHHHHHHHHhhcCCceEE
Confidence 4555567653 455677777877665 4454443 33221 00011111 112345666
Q ss_pred ccCCCcc---cccccCcccccccc----cCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecC-CCc--
Q 011381 356 PSWAPQA---QVLSHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNE-NGL-- 425 (487)
Q Consensus 356 ~~~~pq~---~iL~~~~~~~~I~H----gG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~-~~~-- 425 (487)
....+.. .+++.++ +||.= |=..+++||+++|+|+|+-.. ......|.+ -.-|....... ++.
T Consensus 387 ~~~~~~~~~~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~d-g~~G~~~~~~~~~g~l~ 459 (536)
T 3vue_A 387 VVKFNAPLAHLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIE-GKTGFHMGRLSVDCKVV 459 (536)
T ss_dssp ECSCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCB-TTTEEECCCCCSCTTCC
T ss_pred EEeccHHHHHHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeC-CCCccccccCCCceeEE
Confidence 6666653 3677777 66531 223489999999999998654 344445555 44555433221 111
Q ss_pred --cCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcC
Q 011381 426 --VGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKNP 482 (487)
Q Consensus 426 --~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 482 (487)
.+++.+.++|+++|.....+.+++. .++++..+-|=++..++..+-+++.
T Consensus 460 ~~~d~~~la~ai~ral~~~~~~~~~~~-------~~~am~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 460 EPSDVKKVAATLKRAIKVVGTPAYEEM-------VRNCMNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSHHHHHH-------HHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHhcCcHHHHHH-------HHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 2468899999887751001333322 2222334556555555555555443
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=83.42 E-value=1.3 Score=45.30 Aligned_cols=41 Identities=17% Similarity=0.040 Sum_probs=29.0
Q ss_pred CCCcEEEEEcCCC------ccChHHHHHHHHHHHhcCCCEEEEEecCC
Q 011381 9 IPRAYVAMVPTPG------IGHLIPLVELAKRLVHQYNFLVTIFIPTI 50 (487)
Q Consensus 9 ~~~~~il~~~~~~------~GH~~p~l~La~~L~~~~GH~Vt~~~~~~ 50 (487)
..+|||+++++-. -|=-.-.-+|+++|+++ ||+|++++|..
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~-G~~V~Vi~P~Y 53 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAAN-GHRVMVISPRY 53 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTT-TCEEEEEEECC
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHc-CCeEEEEecCc
Confidence 4579999997421 12123466899999765 99999999764
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=83.11 E-value=0.38 Score=45.57 Aligned_cols=40 Identities=10% Similarity=0.065 Sum_probs=34.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcC-CCEEEEEecCCC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQY-NFLVTIFIPTID 51 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~-GH~Vt~~~~~~~ 51 (487)
|||+++-..+.|++.=..++.++|.++. +.+|++++.+.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~ 41 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGF 41 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGG
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhh
Confidence 5899999999999999999999997654 799999998743
No 59
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=81.54 E-value=0.77 Score=45.19 Aligned_cols=42 Identities=12% Similarity=0.215 Sum_probs=31.8
Q ss_pred CCCCcEEEEEcCCC-----ccChHHHHHHHHHHHhcCCCEEEEEecCC
Q 011381 8 QIPRAYVAMVPTPG-----IGHLIPLVELAKRLVHQYNFLVTIFIPTI 50 (487)
Q Consensus 8 ~~~~~~il~~~~~~-----~GH~~p~l~La~~L~~~~GH~Vt~~~~~~ 50 (487)
..++|||++++... .|=......||++|+++ ||+|+++++..
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~-GheV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHc-CCceEEEEecC
Confidence 35689998887532 14446689999999765 99999999763
No 60
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=79.02 E-value=11 Score=33.36 Aligned_cols=155 Identities=10% Similarity=-0.032 Sum_probs=81.6
Q ss_pred cccCCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCC
Q 011381 272 WLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGV 351 (487)
Q Consensus 272 ~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 351 (487)
|++-.. ++++.|..|.+ ....++.|.+.+..+.++-... .+.+.......
T Consensus 26 fl~L~g-k~VLVVGgG~v-------a~~ka~~Ll~~GA~VtVvap~~----------------------~~~l~~l~~~~ 75 (223)
T 3dfz_A 26 MLDLKG-RSVLVVGGGTI-------ATRRIKGFLQEGAAITVVAPTV----------------------SAEINEWEAKG 75 (223)
T ss_dssp EECCTT-CCEEEECCSHH-------HHHHHHHHGGGCCCEEEECSSC----------------------CHHHHHHHHTT
T ss_pred EEEcCC-CEEEEECCCHH-------HHHHHHHHHHCCCEEEEECCCC----------------------CHHHHHHHHcC
Confidence 444323 55777766532 3445666777788766543321 12222222222
Q ss_pred CceeccCCCcccccccCcccccccccCchhHHHHHhhCCceeccccc-ccchhhhH-----hhhcccceeEEEeecCCCc
Q 011381 352 GLVVPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY-SEQKMNAV-----LLTDDLKVSFRVKVNENGL 425 (487)
Q Consensus 352 ~v~~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~-~DQ~~na~-----~v~~~~G~G~~l~~~~~~~ 425 (487)
++......-+...|..++ ++|.--|.-.+.+.++.-.- ..+|+. .|.+..+. .+.+ -++-+.+..+..+.
T Consensus 76 ~i~~i~~~~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~r-g~l~iaIST~G~sP 151 (223)
T 3dfz_A 76 QLRVKRKKVGEEDLLNVF--FIVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSR-GRLSLAISTDGASP 151 (223)
T ss_dssp SCEEECSCCCGGGSSSCS--EEEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEE-TTEEEEEECTTSCH
T ss_pred CcEEEECCCCHhHhCCCC--EEEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEe-CCEEEEEECCCCCc
Confidence 343333223345577777 88887777666666554333 445542 46655443 2333 34455555543112
Q ss_pred cCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHh
Q 011381 426 VGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANA 461 (487)
Q Consensus 426 ~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~ 461 (487)
.-+..|++.|.+.+.. .-..+-+.+.++++++++.
T Consensus 152 ~la~~iR~~ie~~lp~-~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 152 LLTKRIKEDLSSNYDE-SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHHHSCT-HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccH-HHHHHHHHHHHHHHHHHHH
Confidence 3346677777777743 2356788888888888864
No 61
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=76.96 E-value=10 Score=37.89 Aligned_cols=107 Identities=10% Similarity=0.007 Sum_probs=68.5
Q ss_pred eccCCCccc---ccccCccccccc---ccCch-hHHHHHhhCC-----ceecccccccchhhhHhhhcccceeEEEeecC
Q 011381 355 VPSWAPQAQ---VLSHGSTGGFLS---HCGWN-SILESIVHGV-----PIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNE 422 (487)
Q Consensus 355 ~~~~~pq~~---iL~~~~~~~~I~---HgG~g-t~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 422 (487)
+.+++|+.+ ++..++ +||. .=|+| ++.||+++|+ |+|+--..+ .+. . +.-|+.++..
T Consensus 336 ~~g~v~~~el~~ly~~AD--v~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~---~-l~~g~lv~p~- 404 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSD--VGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN---E-LTSALIVNPY- 404 (482)
T ss_dssp ECSCCCHHHHHHHHHHCS--EEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG---T-CTTSEEECTT-
T ss_pred eCCCCCHHHHHHHHHHcc--EEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH---H-hCCeEEECCC-
Confidence 467888754 566788 5553 34555 7999999998 666544322 111 1 2246666654
Q ss_pred CCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcC
Q 011381 423 NGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKNP 482 (487)
Q Consensus 423 ~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 482 (487)
+.+.++++|.++|++.. +.-+++.++..+.+++ -+.....+.+++.|++.
T Consensus 405 ----d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 405 ----DRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp ----CHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred ----CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 58999999999998521 2244455555555553 36777888888887654
No 62
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=73.67 E-value=21 Score=30.38 Aligned_cols=37 Identities=14% Similarity=0.383 Sum_probs=29.3
Q ss_pred EEEE-cCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 14 VAMV-PTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 14 il~~-~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
|+|+ +-++-|=..-...||..|+++ |++|.++-....
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~-g~~vlliD~D~~ 41 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRS-GYNIAVVDTDPQ 41 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCTT
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEECCCC
Confidence 4444 347899999999999999875 999998876543
No 63
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=72.01 E-value=25 Score=29.68 Aligned_cols=45 Identities=11% Similarity=0.067 Sum_probs=29.5
Q ss_pred eeccCCCc-ccccccCcccccccccCchhHHH---HHhhCCceeccccc
Q 011381 354 VVPSWAPQ-AQVLSHGSTGGFLSHCGWNSILE---SIVHGVPIIAWPLY 398 (487)
Q Consensus 354 ~~~~~~pq-~~iL~~~~~~~~I~HgG~gt~~e---al~~GvP~v~~P~~ 398 (487)
+++++.++ ..++..-+-..++-=||.||+.| ++.+++|++.+|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 34455554 44444433345556689998655 56799999999983
No 64
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=70.35 E-value=39 Score=29.04 Aligned_cols=104 Identities=14% Similarity=0.074 Sum_probs=60.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCCCCcc
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLPDDFQ 90 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (487)
+-.|.+++.++.|-..-.+.+|.+.+.. |++|.|+.--... ... ....+.+.++ +.+......... ...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~-G~rV~~vQF~Kg~--~~~--gE~~~l~~L~--v~~~~~g~gf~~----~~~ 96 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGH-GKNVGVVQFIKGT--WPN--GERNLLEPHG--VEFQVMATGFTW----ETQ 96 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHT-TCCEEEEESSCCS--SCC--HHHHHHGGGT--CEEEECCTTCCC----CGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeeCCC--CCc--cHHHHHHhCC--cEEEEccccccc----CCC
Confidence 4567777878899999999999999765 9999999533210 011 2334455553 777776642211 111
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCCCcc
Q 011381 91 IETRITLTLVRSLSSLRDALKVLAESTRLVALVVDPFGS 129 (487)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~ 129 (487)
.... ........+... .+.+.+.++|+||.|-+..
T Consensus 97 ~~~~---~~~~a~~~l~~a-~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 97 NREA---DTAACMAVWQHG-KRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp GHHH---HHHHHHHHHHHH-HHHTTCTTCSEEEEETHHH
T ss_pred CcHH---HHHHHHHHHHHH-HHHHhcCCCCEEEEeCCCc
Confidence 1111 111122333333 3334566899999998544
No 65
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=68.93 E-value=15 Score=36.82 Aligned_cols=109 Identities=10% Similarity=-0.046 Sum_probs=69.9
Q ss_pred CceeccCCCcc---cccccCccccccc---ccCchh-HHHHHhhC---CceecccccccchhhhHhhhcccc-eeEEEee
Q 011381 352 GLVVPSWAPQA---QVLSHGSTGGFLS---HCGWNS-ILESIVHG---VPIIAWPLYSEQKMNAVLLTDDLK-VSFRVKV 420 (487)
Q Consensus 352 ~v~~~~~~pq~---~iL~~~~~~~~I~---HgG~gt-~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~ 420 (487)
.|++.+.+|+. +++..++ +||. .=|+|. ..||+++| .|+|+--+.+ .+ +. +| -|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~AD--v~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~---~~-l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRAD--LLIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA---EV-LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCS--EEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH---HH-HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhcc--EEEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH---HH-hCCCEEEECC
Confidence 46667778764 4555677 4442 468884 68999996 5655443322 12 22 22 4777876
Q ss_pred cCCCccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhc
Q 011381 421 NENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKN 481 (487)
Q Consensus 421 ~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 481 (487)
. +.+.++++|.++|+... ++-+++.+++.+.+. .-+...-.+.+++.|..
T Consensus 423 ~-----D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 F-----DLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp T-----BHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred C-----CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 4 59999999999998632 345566666666665 34566677777777754
No 66
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=66.13 E-value=14 Score=38.48 Aligned_cols=44 Identities=16% Similarity=0.015 Sum_probs=30.5
Q ss_pred eeccCCCcc---------cccccCcccccccc----cCchhHHHHHhhCCceecccccc
Q 011381 354 VVPSWAPQA---------QVLSHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYS 399 (487)
Q Consensus 354 ~~~~~~pq~---------~iL~~~~~~~~I~H----gG~gt~~eal~~GvP~v~~P~~~ 399 (487)
.+-.|++.. .++..++ +||.= |-..+.+||+++|+|+|+--..+
T Consensus 496 f~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 496 FHPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp ECCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred EeccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 345777664 3677888 55532 23458999999999999866543
No 67
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=64.92 E-value=7.5 Score=33.98 Aligned_cols=39 Identities=18% Similarity=0.138 Sum_probs=32.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
++++||++.-.++.|-++ ...|.+.|.++ |++|.++.++
T Consensus 2 ~~~k~IllgvTGaiaa~k-~~~ll~~L~~~-g~eV~vv~T~ 40 (209)
T 3zqu_A 2 SGPERITLAMTGASGAQY-GLRLLDCLVQE-EREVHFLISK 40 (209)
T ss_dssp CSCSEEEEEECSSSCHHH-HHHHHHHHHHT-TCEEEEEECH
T ss_pred CCCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEECc
Confidence 345689998889988877 88999999765 9999999877
No 68
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=64.34 E-value=42 Score=27.66 Aligned_cols=138 Identities=12% Similarity=0.148 Sum_probs=74.5
Q ss_pred eEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCC
Q 011381 280 SVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWA 359 (487)
Q Consensus 280 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~ 359 (487)
|.|-|-+||.+ +....++....|+.++.++-..+-+-.. .|+.+.+- +
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR-------------------~p~~~~~~-----------~ 50 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK-------------------TAEHVVSM-----------L 50 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------CHHHHHHH-----------H
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC-------------------CHHHHHHH-----------H
Confidence 46777788754 6677888999999999875444443332 45433211 1
Q ss_pred CcccccccCcccccccccCch----hHHHHHhhCCceeccccccc---ch-hhhHhhhcccceeEEEeecCCCccCHHHH
Q 011381 360 PQAQVLSHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSE---QK-MNAVLLTDDLKVSFRVKVNENGLVGREDI 431 (487)
Q Consensus 360 pq~~iL~~~~~~~~I~HgG~g----t~~eal~~GvP~v~~P~~~D---Q~-~na~~v~~~~G~G~~l~~~~~~~~~~~~l 431 (487)
.... ..-..+++|.=.|.- ++..++ .-+|+|.+|...- -. .++-.-.- -|+.+.--. +..++.-+
T Consensus 51 ~~a~--~~~~~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vqmp-~GvpVatv~---~~~nAa~l 123 (159)
T 3rg8_A 51 KEYE--ALDRPKLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLRMP-SGISPALVL---EPKNAALL 123 (159)
T ss_dssp HHHH--TSCSCEEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHCCC-TTCCCEECC---SHHHHHHH
T ss_pred HHhh--hcCCCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHhCC-CCCceEEec---CchHHHHH
Confidence 0000 000112555555543 333333 5589999997531 11 12111112 255532211 23667666
Q ss_pred HHHHHHhccCchhHHHHHHHHHHHHHHHH
Q 011381 432 ANYAKGLIQGEEGKLLRKKMRALKDAAAN 460 (487)
Q Consensus 432 ~~av~~vl~~~~~~~~~~~a~~l~~~~~~ 460 (487)
+..|.. +.| +.++++.+..++.+++
T Consensus 124 A~~Il~-~~d---~~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 124 AARIFS-LYD---KEIADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHT-TTC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHh-CCC---HHHHHHHHHHHHHHHH
Confidence 666654 456 7888888888877765
No 69
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=63.21 E-value=58 Score=27.36 Aligned_cols=140 Identities=15% Similarity=0.178 Sum_probs=74.7
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHH---HhhcCCCcee
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFL---DRTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~v~~ 355 (487)
+|.|-|-+||.+ +....++..+.|+.++..+-..+-+-.+ .|+.+. +..+..++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR-------------------tp~~l~~~~~~a~~~g~-- 78 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR-------------------TPDYMFEYAETARERGL-- 78 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHHHHHHTTTTTC--
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc-------------------ChHHHHHHHHHHHhcCc--
Confidence 567888899865 5677888999999999876444444332 454332 12122221
Q ss_pred ccCCCcccccccCcccccccccC-ch---hHHHHHhhCCceecccccccc---hhhhHhhhcccceeEEEee---cCCCc
Q 011381 356 PSWAPQAQVLSHGSTGGFLSHCG-WN---SILESIVHGVPIIAWPLYSEQ---KMNAVLLTDDLKVSFRVKV---NENGL 425 (487)
Q Consensus 356 ~~~~pq~~iL~~~~~~~~I~HgG-~g---t~~eal~~GvP~v~~P~~~DQ---~~na~~v~~~~G~G~~l~~---~~~~~ 425 (487)
+++|.=.| .+ ++..+ ..-+|+|.+|....- .+.---+.. .=-|+-+-. ...+-
T Consensus 79 ---------------~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga 141 (181)
T 4b4k_A 79 ---------------KVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGS 141 (181)
T ss_dssp ---------------CEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHH
T ss_pred ---------------eEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccH
Confidence 24444444 32 23322 345799999996532 222222222 223332222 11011
Q ss_pred cCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhc
Q 011381 426 VGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANAL 462 (487)
Q Consensus 426 ~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~ 462 (487)
.|+.-++..|-. +.| +.++++.+..++.+++.+
T Consensus 142 ~NAallA~qILa-~~d---~~l~~kl~~~r~~~~~~v 174 (181)
T 4b4k_A 142 TNAGLLAAQILG-SFH---DDIHDALELRREAIEKDV 174 (181)
T ss_dssp HHHHHHHHHHHT-TTC---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-cCC---HHHHHHHHHHHHHHHHHH
Confidence 234444444432 446 788888888888777643
No 70
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=62.10 E-value=43 Score=27.91 Aligned_cols=143 Identities=15% Similarity=0.158 Sum_probs=78.8
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHH---hhcCCCcee
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD---RTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~v~~ 355 (487)
+|.|-|-+||.+ +....++....|+.++.++=..+-+-.. .|+.+.+ ..+..
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR-------------------~p~~l~~~~~~a~~~---- 65 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR-------------------TPDYMFEYAETARER---- 65 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHHHHHHTTTT----
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC-------------------CHHHHHHHHHHHHhC----
Confidence 567888889855 6777888999999999875444443322 4553321 11111
Q ss_pred ccCCCcccccccCcccccccccCchhHHHHHh---hCCceeccccccc--chhhhH--hhh-cccceeEE-EeecCCCcc
Q 011381 356 PSWAPQAQVLSHGSTGGFLSHCGWNSILESIV---HGVPIIAWPLYSE--QKMNAV--LLT-DDLKVSFR-VKVNENGLV 426 (487)
Q Consensus 356 ~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~---~GvP~v~~P~~~D--Q~~na~--~v~-~~~G~G~~-l~~~~~~~~ 426 (487)
..+ ++|.=.|.-.-+-++. .-.|+|.+|.... ....+- .++ - .|+.+. +...+-+-.
T Consensus 66 -----------g~~--ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP-~GvpVatV~I~~a~~~ 131 (170)
T 1xmp_A 66 -----------GLK--VIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMP-GGVPVATVAIGKAGST 131 (170)
T ss_dssp -----------TCC--EEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCC-TTCCCEECCSSHHHHH
T ss_pred -----------CCc--EEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCC-CCCeeEEEecCCcchH
Confidence 122 5555444433333333 3589999998542 111111 112 1 244421 221100124
Q ss_pred CHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCC
Q 011381 427 GREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSP 464 (487)
Q Consensus 427 ~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~ 464 (487)
++.-++..|. -+.| +.++++.+.+++.+++.+.+
T Consensus 132 nAallAaqIl-a~~d---~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 132 NAGLLAAQIL-GSFH---DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHH-HTTC---HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH-ccCC---HHHHHHHHHHHHHHHHHHHh
Confidence 6666666665 3556 88999999999888875433
No 71
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=61.24 E-value=41 Score=30.17 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=28.2
Q ss_pred CcEEEEEc-C-CCccChHHHHHHHHHHHhcCCCEEEEEec
Q 011381 11 RAYVAMVP-T-PGIGHLIPLVELAKRLVHQYNFLVTIFIP 48 (487)
Q Consensus 11 ~~~il~~~-~-~~~GH~~p~l~La~~L~~~~GH~Vt~~~~ 48 (487)
+|+.+|++ . ..-|-..-.+.|+++|+++ |.+|.++=|
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~-G~~V~~fKP 63 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQA-GIDVAVCKP 63 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCeEEEEee
Confidence 44554444 3 4788899999999999765 999999864
No 72
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=59.59 E-value=75 Score=26.35 Aligned_cols=145 Identities=15% Similarity=0.163 Sum_probs=78.6
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccC
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSW 358 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ 358 (487)
+|.|-|-+||.+ +....++....|+.++..+-..+-+-.. .|+.+.+ |
T Consensus 5 ~p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR-------------------tp~~l~~-----------~ 52 (166)
T 3oow_A 5 SVQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAHR-------------------TPDKMFD-----------Y 52 (166)
T ss_dssp CEEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------CHHHHHH-----------H
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCcC-------------------CHHHHHH-----------H
Confidence 356778888755 6777888999999999865444433322 4553321 1
Q ss_pred CCcccccccCcccccccccCchhHHHHHh---hCCceecccccccc------hhhhHhhhcccceeEEE-eecCCCccCH
Q 011381 359 APQAQVLSHGSTGGFLSHCGWNSILESIV---HGVPIIAWPLYSEQ------KMNAVLLTDDLKVSFRV-KVNENGLVGR 428 (487)
Q Consensus 359 ~pq~~iL~~~~~~~~I~HgG~gt~~eal~---~GvP~v~~P~~~DQ------~~na~~v~~~~G~G~~l-~~~~~~~~~~ 428 (487)
+.... -...+ +||.=.|.-.-+-++. .-+|+|.+|..... -.-.-++.. |+++.. ...+-+-.++
T Consensus 53 ~~~~~-~~g~~--ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--gvpVatV~I~~ag~~nA 127 (166)
T 3oow_A 53 AETAK-ERGLK--VIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPA--GIPVATFAIGMAGAKNA 127 (166)
T ss_dssp HHHTT-TTTCC--EEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHH
T ss_pred HHHHH-hCCCc--EEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCC--CCceEEEecCCccchHH
Confidence 11100 01122 6666555443333333 35899999985421 111222333 444322 1110011456
Q ss_pred HHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCC
Q 011381 429 EDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSP 464 (487)
Q Consensus 429 ~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~ 464 (487)
.-++..|.. +.| +.++++.+.+++.+++.+.+
T Consensus 128 a~lAa~Il~-~~d---~~l~~kl~~~r~~~~~~v~~ 159 (166)
T 3oow_A 128 ALFAASILQ-HTD---INIAKALAEFRAEQTRFVLE 159 (166)
T ss_dssp HHHHHHHHG-GGC---HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHc-CCC---HHHHHHHHHHHHHHHHHHHh
Confidence 666666654 456 78999999998888865533
No 73
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=59.58 E-value=60 Score=28.64 Aligned_cols=38 Identities=8% Similarity=-0.091 Sum_probs=24.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcC-CCEEEEEecC
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQY-NFLVTIFIPT 49 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~-GH~Vt~~~~~ 49 (487)
.+++||+|+..++.. -+.++.++|.+.. +++|..+.+.
T Consensus 20 ~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~ 58 (229)
T 3auf_A 20 GHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISD 58 (229)
T ss_dssp TTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEES
T ss_pred CCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcC
Confidence 446799999766532 3667777885432 5788666544
No 74
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=58.91 E-value=14 Score=32.79 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=37.0
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCC
Q 011381 7 KQIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTI 50 (487)
Q Consensus 7 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~ 50 (487)
....+++|++..-|+.|-.+-++.+|.+|+++ |++|.++....
T Consensus 2 ~~~g~l~I~~~~kgGvGKTt~a~~la~~l~~~-G~~V~v~d~D~ 44 (228)
T 2r8r_A 2 NARGRLKVFLGAAPGVGKTYAMLQAAHAQLRQ-GVRVMAGVVET 44 (228)
T ss_dssp -CCCCEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CCCceEEEEEECCCCCcHHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 34567899999999999999999999999876 99998887654
No 75
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=58.71 E-value=25 Score=31.45 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=28.3
Q ss_pred CcEEEEEcC--CCccChHHHHHHHHHHHhcCCCEEEEEec
Q 011381 11 RAYVAMVPT--PGIGHLIPLVELAKRLVHQYNFLVTIFIP 48 (487)
Q Consensus 11 ~~~il~~~~--~~~GH~~p~l~La~~L~~~~GH~Vt~~~~ 48 (487)
+++.+|++. ..-|=..-.+.|+++|+++ |.+|.++=|
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~-G~~V~~fKP 58 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNAC-GVKTILLKP 58 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEECC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHhC-CCceEEEee
Confidence 445554443 5778899999999999765 999999854
No 76
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=55.67 E-value=25 Score=34.51 Aligned_cols=39 Identities=13% Similarity=0.173 Sum_probs=32.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
-+++...|+.|-..=.+.+|...+.+.|..|.|++.+..
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~ 240 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMP 240 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 567778899999999999999997645899999998743
No 77
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=54.91 E-value=70 Score=26.74 Aligned_cols=143 Identities=13% Similarity=0.140 Sum_probs=77.2
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHH---hhcCCCcee
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD---RTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~v~~ 355 (487)
+|.|-|-+||.+ +....++....|+.++.++-..+-+-.. .|+.+.+ ....
T Consensus 12 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~SaHR-------------------~p~~~~~~~~~a~~----- 65 (174)
T 3kuu_A 12 GVKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSAHR-------------------TPDRLFSFAEQAEA----- 65 (174)
T ss_dssp CCCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------CHHHHHHHHHHTTT-----
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC-------------------CHHHHHHHHHHHHh-----
Confidence 346777788755 6777888999999999876444444332 4553321 1111
Q ss_pred ccCCCcccccccCcccccccccCchhHHHHHh---hCCceecccccccch-hhhHhh--h--cccceeEE-EeecCCCcc
Q 011381 356 PSWAPQAQVLSHGSTGGFLSHCGWNSILESIV---HGVPIIAWPLYSEQK-MNAVLL--T--DDLKVSFR-VKVNENGLV 426 (487)
Q Consensus 356 ~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~---~GvP~v~~P~~~DQ~-~na~~v--~--~~~G~G~~-l~~~~~~~~ 426 (487)
...+ ++|.=.|.-.-+-++. .-+|+|.+|...--. .....+ . - -|+.+. +...+.+-.
T Consensus 66 ----------~g~~--ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP-~GvPVatV~I~~a~~~ 132 (174)
T 3kuu_A 66 ----------NGLH--VIIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMP-RGIPVGTLAIGKAGAA 132 (174)
T ss_dssp ----------TTCS--EEEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCC-TTSCCEECCSSHHHHH
T ss_pred ----------CCCc--EEEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCC-CCCeeEEEEeCCccch
Confidence 1122 5565555433333322 358999999854211 111111 1 2 254322 111100124
Q ss_pred CHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCC
Q 011381 427 GREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSP 464 (487)
Q Consensus 427 ~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~ 464 (487)
++.-+...|.. +.| +.++++.+.+++.+++.+.+
T Consensus 133 nAa~lAa~ILa-~~d---~~l~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 133 NAALLAAQILA-LHD---TELAGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp HHHHHHHHHHH-TTC---HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHc-CCC---HHHHHHHHHHHHHHHHHHHh
Confidence 56566666644 456 88999999999888865543
No 78
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=52.24 E-value=46 Score=32.25 Aligned_cols=33 Identities=9% Similarity=0.139 Sum_probs=21.3
Q ss_pred HHHHhccCCceEEEe--CCCcchHHHHHHHhCCCc
Q 011381 110 LKVLAESTRLVALVV--DPFGSAAFDVANEVGVPA 142 (487)
Q Consensus 110 l~~~~~~~~~D~VI~--D~~~~~~~~~A~~lgIP~ 142 (487)
+.++.++.++|.|+. |.....+..+|+.+|+|.
T Consensus 67 ~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 67 VRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 334444568999984 333334456889999994
No 79
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=51.04 E-value=1.1e+02 Score=27.22 Aligned_cols=37 Identities=5% Similarity=0.002 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCh-HHHHHHHHHHHhcCCCEEEEEecC
Q 011381 12 AYVAMVPTPGIGHL-IPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~~~~GH~-~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
|||+++-.-+.-++ ..+...++.++. -|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~-p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAA-PGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCC-TTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcC-CCCEEEEEeCC
Confidence 68887776666666 466668887754 37788777644
No 80
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=50.92 E-value=82 Score=28.27 Aligned_cols=32 Identities=28% Similarity=0.271 Sum_probs=22.8
Q ss_pred CCceEEE-eCCCcch-HHHHHHHhCCCcEEEecc
Q 011381 117 TRLVALV-VDPFGSA-AFDVANEVGVPAYVFFTT 148 (487)
Q Consensus 117 ~~~D~VI-~D~~~~~-~~~~A~~lgIP~v~~~~~ 148 (487)
.-||+|| .|+..-- +..=|.++|||+|.+.-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 4799765 7774433 446788999999987543
No 81
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=50.55 E-value=57 Score=28.45 Aligned_cols=108 Identities=4% Similarity=0.009 Sum_probs=0.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCC--EEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCCCC
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNF--LVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLPDD 88 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH--~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (487)
++||+|+..++. .-+.++.++|.+. +| +|..+.+... .......+...++.+..++.....+
T Consensus 1 m~rI~vl~SG~g---~~~~~~l~~l~~~-~~~~~i~~Vvs~~~--------~~~~~~~A~~~gIp~~~~~~~~~~~---- 64 (216)
T 2ywr_A 1 MLKIGVLVSGRG---SNLQAIIDAIESG-KVNASIELVISDNP--------KAYAIERCKKHNVECKVIQRKEFPS---- 64 (216)
T ss_dssp CEEEEEEECSCC---HHHHHHHHHHHTT-SSCEEEEEEEESCT--------TCHHHHHHHHHTCCEEECCGGGSSS----
T ss_pred CCEEEEEEeCCc---HHHHHHHHHHHhC-CCCCeEEEEEeCCC--------ChHHHHHHHHcCCCEEEeCcccccc----
Q ss_pred cchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEE-eCCCcchHHHHHHHhCCCcEEEecc
Q 011381 89 FQIETRITLTLVRSLSSLRDALKVLAESTRLVALV-VDPFGSAAFDVANEVGVPAYVFFTT 148 (487)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI-~D~~~~~~~~~A~~lgIP~v~~~~~ 148 (487)
.+.+.+.+.+.+++.++|++| +.++..-...+-......++-++++
T Consensus 65 --------------r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 --------------KKEFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --------------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --------------hhhhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
No 82
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=50.01 E-value=10 Score=34.36 Aligned_cols=54 Identities=15% Similarity=0.249 Sum_probs=38.7
Q ss_pred ccCcccccccccCchhHHHHHhh---CCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccC
Q 011381 366 SHGSTGGFLSHCGWNSILESIVH---GVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQG 441 (487)
Q Consensus 366 ~~~~~~~~I~HgG~gt~~eal~~---GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~ 441 (487)
..++ ++|+=||=||+.+++.. ++|+++++.. . + |.. .+ +.++++.++++.++++
T Consensus 40 ~~~D--~vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~--Gfl---~~---~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 40 VTAD--LIVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-L--GFL---TS---YTLDEIDRFLEDLRNW 96 (258)
T ss_dssp BCCS--EEEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-C--CSS---CC---BCGGGHHHHHHHHHTT
T ss_pred CCCC--EEEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-C--Ccc---Cc---CCHHHHHHHHHHHHcC
Confidence 3566 99999999999999877 7888888732 1 1 111 11 4577888888888765
No 83
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=49.71 E-value=25 Score=31.78 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=30.4
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
.++||||+.-=-+. |---+.+|+++| ++ +|+|+++.|...
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l-~~-~~~V~VVAP~~~ 48 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTL-AD-LGEVDVVAPDRN 48 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHH-TT-TSEEEEEEESSC
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHH-Hh-cCCEEEEecCCC
Confidence 56799988875544 556688999999 55 899999999866
No 84
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=49.37 E-value=65 Score=26.88 Aligned_cols=142 Identities=16% Similarity=0.196 Sum_probs=76.5
Q ss_pred CCeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHH---HhhcCCCce
Q 011381 278 SESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFL---DRTKGVGLV 354 (487)
Q Consensus 278 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~v~ 354 (487)
+.|.|-|-+||.+ +....++....|+.++.++-..+-+-.+ .|+.+. +..+..++
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR-------------------~p~~l~~~~~~a~~~g~- 68 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHR-------------------MPDEMFDYAEKARERGL- 68 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHHHHHHHTTTTC-
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcccc-------------------CHHHHHHHHHHHHhcCC-
Confidence 3568888899865 6677888999999999875444333322 455332 12222221
Q ss_pred eccCCCcccccccCcccccccc-cCch---hHHHHHhhCCceecccccccc---hhhhHhhhc-ccceeEEE-eecCCCc
Q 011381 355 VPSWAPQAQVLSHGSTGGFLSH-CGWN---SILESIVHGVPIIAWPLYSEQ---KMNAVLLTD-DLKVSFRV-KVNENGL 425 (487)
Q Consensus 355 ~~~~~pq~~iL~~~~~~~~I~H-gG~g---t~~eal~~GvP~v~~P~~~DQ---~~na~~v~~-~~G~G~~l-~~~~~~~ 425 (487)
+ ++|.= ||.+ ++..+ ..-+|+|.+|....- .+--.-+.. -.|+.+.. ..+.++-
T Consensus 69 --------------~--ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a 131 (173)
T 4grd_A 69 --------------R--AIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGA 131 (173)
T ss_dssp --------------S--EEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHH
T ss_pred --------------e--EEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcch
Confidence 1 34433 3333 34433 357899999985432 111111111 02443321 1111112
Q ss_pred cCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhc
Q 011381 426 VGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANAL 462 (487)
Q Consensus 426 ~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~ 462 (487)
.++.-++..|-. +.| +.++++.++++++.++.+
T Consensus 132 ~NAallA~~ILa-~~d---~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 132 ANAALFAVSILS-GNS---VDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHHHHHHHHHHT-TSC---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCC---HHHHHHHHHHHHHHHHHH
Confidence 445555555532 456 889999999888887643
No 85
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=49.24 E-value=44 Score=29.17 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=23.1
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhc-CCCEEEEEecC
Q 011381 7 KQIPRAYVAMVPTPGIGHLIPLVELAKRLVHQ-YNFLVTIFIPT 49 (487)
Q Consensus 7 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~-~GH~Vt~~~~~ 49 (487)
++.+++||+++..++ || -+.+|.+++.+. .+++|..+.+.
T Consensus 4 ~~~~~~ri~vl~SG~-gs--nl~all~~~~~~~~~~~I~~Vis~ 44 (215)
T 3kcq_A 4 SMKKELRVGVLISGR-GS--NLEALAKAFSTEESSVVISCVISN 44 (215)
T ss_dssp ---CCEEEEEEESSC-CH--HHHHHHHHTCCC-CSEEEEEEEES
T ss_pred CCCCCCEEEEEEECC-cH--HHHHHHHHHHcCCCCcEEEEEEeC
Confidence 345577998887555 33 356677777322 12788877663
No 86
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=49.01 E-value=1.1e+02 Score=25.84 Aligned_cols=144 Identities=12% Similarity=0.130 Sum_probs=80.3
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHH---HhhcCCCcee
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFL---DRTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~v~~ 355 (487)
.+.|-|-+||.+ +....++....|+.++.++-..+-+-.. .|+.+. +.....
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR-------------------~p~~l~~~~~~a~~~---- 75 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAHR-------------------TPDRLADYARTAAER---- 75 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------CHHHHHHHHHHTTTT----
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC-------------------CHHHHHHHHHHHHhC----
Confidence 346777788754 6777888999999999875444443322 455332 111111
Q ss_pred ccCCCcccccccCcccccccccCch----hHHHHHhhCCceeccccccc--chhhh--Hhhh-cccceeEE-EeecCCCc
Q 011381 356 PSWAPQAQVLSHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSE--QKMNA--VLLT-DDLKVSFR-VKVNENGL 425 (487)
Q Consensus 356 ~~~~pq~~iL~~~~~~~~I~HgG~g----t~~eal~~GvP~v~~P~~~D--Q~~na--~~v~-~~~G~G~~-l~~~~~~~ 425 (487)
..+ ++|.=.|.- ++..++ .-+|+|.+|.... ....+ ..++ - .|+.+. +...+-+.
T Consensus 76 -----------g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP-~GvpVatV~I~~a~~ 140 (182)
T 1u11_A 76 -----------GLN--VIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMP-GGVPVGTLAIGASGA 140 (182)
T ss_dssp -----------TCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCC-TTSCCEECCSSHHHH
T ss_pred -----------CCc--EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCC-CCCceEEEecCCccc
Confidence 122 555544433 444444 4789999998542 11111 1122 1 255431 22110012
Q ss_pred cCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCC
Q 011381 426 VGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDG 466 (487)
Q Consensus 426 ~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g 466 (487)
.++.-+...|. -+.| +.++++.+.+++.+++.+.+..
T Consensus 141 ~nAallAaqIl-a~~d---~~l~~kL~~~r~~~~~~v~~~~ 177 (182)
T 1u11_A 141 KNAALLAASIL-ALYN---PALAARLETWRALQTASVPNSP 177 (182)
T ss_dssp HHHHHHHHHHH-GGGC---HHHHHHHHHHHHHHHHHSCSSC
T ss_pred hHHHHHHHHHH-ccCC---HHHHHHHHHHHHHHHHHHHHhh
Confidence 46666666665 3556 8999999999999887665544
No 87
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=47.48 E-value=64 Score=28.48 Aligned_cols=30 Identities=17% Similarity=0.235 Sum_probs=21.1
Q ss_pred CceEEE-eCCCcch-HHHHHHHhCCCcEEEec
Q 011381 118 RLVALV-VDPFGSA-AFDVANEVGVPAYVFFT 147 (487)
Q Consensus 118 ~~D~VI-~D~~~~~-~~~~A~~lgIP~v~~~~ 147 (487)
-||+|| .|+..-- +..=|.++|||+|.+.-
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivD 188 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLID 188 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEec
Confidence 599766 7774433 44578889999998643
No 88
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=47.31 E-value=43 Score=27.65 Aligned_cols=39 Identities=21% Similarity=-0.025 Sum_probs=33.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
++.+|++.+.++-+|-....-++..|.. .|++|.+....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~-~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRD-AGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHH-TTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCC
Confidence 4568999999999999999999999965 59999987654
No 89
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=47.28 E-value=1.6e+02 Score=26.59 Aligned_cols=89 Identities=7% Similarity=-0.152 Sum_probs=52.2
Q ss_pred cCcccccccccCchhHHHHHh-----h---CCceecccccccchhhhH-----hhhcccc-eeEEEeecCCCccCHHHHH
Q 011381 367 HGSTGGFLSHCGWNSILESIV-----H---GVPIIAWPLYSEQKMNAV-----LLTDDLK-VSFRVKVNENGLVGREDIA 432 (487)
Q Consensus 367 ~~~~~~~I~HgG~gt~~eal~-----~---GvP~v~~P~~~DQ~~na~-----~v~~~~G-~G~~l~~~~~~~~~~~~l~ 432 (487)
.++ ++|.--|...+.+.++ . |+|+-+ .|.+.++. .+.+ -+ +-+.+..+.....-+..|+
T Consensus 106 ~ad--lViaat~d~~~n~~I~~~Ar~~f~~~i~VNv----vd~pel~~f~~Pa~~~~-g~~l~IaIST~Gksp~lA~~ir 178 (274)
T 1kyq_A 106 AWY--IIMTCIPDHPESARIYHLCKERFGKQQLVNV----ADKPDLCDFYFGANLEI-GDRLQILISTNGLSPRFGALVR 178 (274)
T ss_dssp CEE--EEEECCSCHHHHHHHHHHHHHHHCTTSEEEE----TTCGGGBSEECCEEEEE-TTTEEEEEEESSSCHHHHHHHH
T ss_pred CeE--EEEEcCCChHHHHHHHHHHHHhcCCCcEEEE----CCCcccCeeEeeeEEEe-CCCEEEEEECCCCCcHHHHHHH
Confidence 566 7777777654444433 2 455422 35555555 4455 34 4455554431123346788
Q ss_pred HHHHHhc---cCchhHHHHHHHHHHHHHHHHhc
Q 011381 433 NYAKGLI---QGEEGKLLRKKMRALKDAAANAL 462 (487)
Q Consensus 433 ~av~~vl---~~~~~~~~~~~a~~l~~~~~~~~ 462 (487)
+.|...| .+..-..+-+.+.++++++++..
T Consensus 179 ~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~ 211 (274)
T 1kyq_A 179 DEIRNLFTQMGDLALEDAVVKLGELRRGIRLLA 211 (274)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhC
Confidence 8888888 53333567888888999998754
No 90
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=46.49 E-value=22 Score=33.56 Aligned_cols=38 Identities=13% Similarity=0.267 Sum_probs=32.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
-+++..-|+.|-..=.+.+|..++.. |..|.|++.+..
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~-g~~Vl~fSlEms 85 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALND-DRGVAVFSLEMS 85 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHT-TCEEEEEESSSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEeCCCC
Confidence 46777779999999999999999774 999999998744
No 91
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=46.10 E-value=34 Score=33.70 Aligned_cols=38 Identities=16% Similarity=0.311 Sum_probs=33.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
-+++..-|+.|-..=.+.+|...+.+ |..|.|++.+..
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~-g~~vl~fSlEms 236 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMG 236 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHT-TCEEEEECSSSC
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHc-CCEEEEEECCCC
Confidence 57777889999999999999999876 999999998754
No 92
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=45.60 E-value=27 Score=27.79 Aligned_cols=37 Identities=11% Similarity=0.150 Sum_probs=26.4
Q ss_pred cEEEEEcC-C--CccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 12 AYVAMVPT-P--GIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~-~--~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
.+++|+.. + .....+..+.||...++. ||+|+++...
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~-g~eV~vFf~~ 55 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASM-EYETSVFFMI 55 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHT-TCEEEEEECT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEe
Confidence 34544443 4 466778888899888775 9999988765
No 93
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=45.22 E-value=30 Score=27.67 Aligned_cols=38 Identities=11% Similarity=-0.035 Sum_probs=32.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
+.+|++.+.++-+|-....-++..|.. .|++|.+.+..
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~-~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTN-AGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHH-TTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHH-CCCEEEECCCC
Confidence 347999999999999999999999965 59999988764
No 94
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=45.15 E-value=89 Score=26.12 Aligned_cols=140 Identities=16% Similarity=0.153 Sum_probs=75.9
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccC
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSW 358 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ 358 (487)
+|.|-|-+||.+ +....++....|+.++.++=..+-+-.. .|+.+.+-.+
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR-------------------~p~~~~~~~~--------- 56 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHR-------------------TPEAMFSYAR--------- 56 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------CHHHHHHHHH---------
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCC-------------------CHHHHHHHHH---------
Confidence 456777788755 6777888999999999875444433322 4543321100
Q ss_pred CCcccccccCcccccccccCch----hHHHHHhhCCceecccccccch--hh----hHhhhcccceeEEEeecCCCccCH
Q 011381 359 APQAQVLSHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSEQK--MN----AVLLTDDLKVSFRVKVNENGLVGR 428 (487)
Q Consensus 359 ~pq~~iL~~~~~~~~I~HgG~g----t~~eal~~GvP~v~~P~~~DQ~--~n----a~~v~~~~G~G~~l~~~~~~~~~~ 428 (487)
... -...+ ++|.=.|.. ++..++ .-+|+|.+|...-.. .. .-++ - -|+.+..-.- |+..++
T Consensus 57 --~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqm-p-~GvpVatV~I-~~~~nA 127 (174)
T 3lp6_A 57 --GAA-ARGLE--VIIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQM-P-AGVPVATVSI-GGAGNA 127 (174)
T ss_dssp --HHH-HHTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCC-C-TTCCCEECCT-TCHHHH
T ss_pred --HHH-hCCCC--EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhC-C-CCCeeEEEEc-CcchHH
Confidence 000 01122 555544433 334333 568999999863211 11 1112 2 3533322110 112567
Q ss_pred HHHHHHHHHhccCchhHHHHHHHHHHHHHHHHh
Q 011381 429 EDIANYAKGLIQGEEGKLLRKKMRALKDAAANA 461 (487)
Q Consensus 429 ~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~ 461 (487)
.-++..|.. +.| +.++++.+.+++.+++.
T Consensus 128 a~lAa~Il~-~~d---~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 128 GLLAVRMLG-AAN---PQLRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHH-TTC---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCC---HHHHHHHHHHHHHHHHH
Confidence 666666654 456 78999999888888763
No 95
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=44.60 E-value=20 Score=37.90 Aligned_cols=117 Identities=10% Similarity=0.038 Sum_probs=80.8
Q ss_pred eccCCCcccccccCcccccccccCchhHHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecC--C--CccCHHH
Q 011381 355 VPSWAPQAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNE--N--GLVGRED 430 (487)
Q Consensus 355 ~~~~~pq~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~--~--~~~~~~~ 430 (487)
+.++.+-.++|..+| ++||--. ..+.|.+..++|+|....-.|++.+- . .| ...+..+ . -.-+.++
T Consensus 603 ~~~~~di~~ll~~aD--~lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~~----~-rg--~y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNYNDVSELFLISD--CLITDYS-SVMFDYGILKRPQFFFAYDIDKYDKG----L-RG--FYMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTCSCHHHHHHTCS--EEEESSC-THHHHHGGGCCCEEEECTTTTTTTSS----C-CS--BSSCTTSSSSSCEESSHHH
T ss_pred CCCCcCHHHHHHHhC--EEEeech-HHHHhHHhhCCCEEEecCCHHHHhhc----c-CC--cccChhHhCCCCeECCHHH
Confidence 455566678999999 9999864 57899999999999988766665431 1 12 2222111 0 0147789
Q ss_pred HHHHHHHhccCchhHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCCC
Q 011381 431 IANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQLARIWKNPEF 484 (487)
Q Consensus 431 l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~ 484 (487)
|.++|.....+ ...|+++.+++.+.+-.. +.|.++++.++.+++..+....
T Consensus 673 L~~~i~~~~~~--~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~~~~ 723 (729)
T 3l7i_A 673 LAKELKNLDKV--QQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKEQLE 723 (729)
T ss_dssp HHHHHTTHHHH--HHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhhhhcc--chhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcCccc
Confidence 99999887642 156888888888887643 4677888899998887765443
No 96
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=44.10 E-value=30 Score=29.89 Aligned_cols=39 Identities=21% Similarity=0.096 Sum_probs=31.3
Q ss_pred CcEEEEEcCCCccChH-HHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 11 RAYVAMVPTPGIGHLI-PLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~-p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
..||++.-.++ +..+ =.+.|.+.|.++ |++|.++.++.-
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~-g~eV~vv~T~~A 46 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVEL-GAKVTPFVTHTV 46 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHT-TCEEEEECSSCS
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhC-CCEEEEEEChhH
Confidence 45888888787 5555 789999999765 999999988754
No 97
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=44.04 E-value=1.3e+02 Score=24.81 Aligned_cols=138 Identities=15% Similarity=0.174 Sum_probs=75.3
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHH---hhcCCCcee
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD---RTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~v~~ 355 (487)
++.|-|-+||.+ +....++....|+.++.++=..+-+-.. .|+.+.+ .....
T Consensus 3 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR-------------------~p~~~~~~~~~a~~~---- 57 (163)
T 3ors_A 3 AMKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAHR-------------------TPKMMVQFASEARER---- 57 (163)
T ss_dssp CCCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHHHHHHTTTT----
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCcC-------------------CHHHHHHHHHHHHhC----
Confidence 346777788754 6777888999999999875444443322 4553321 11111
Q ss_pred ccCCCcccccccCcccccccccCch----hHHHHHhhCCceecccccccch--h----hhHhhhcccceeEE-EeecCCC
Q 011381 356 PSWAPQAQVLSHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSEQK--M----NAVLLTDDLKVSFR-VKVNENG 424 (487)
Q Consensus 356 ~~~~pq~~iL~~~~~~~~I~HgG~g----t~~eal~~GvP~v~~P~~~DQ~--~----na~~v~~~~G~G~~-l~~~~~~ 424 (487)
..+ ++|.=.|.- ++..++ .-+|+|.+|....-. . -.-++ - -|+.+. +..++.+
T Consensus 58 -----------g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqm-p-~GvPVatV~I~~a~ 121 (163)
T 3ors_A 58 -----------GIN--IIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQM-P-GGIPVATTAIGAAG 121 (163)
T ss_dssp -----------TCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTC-C-TTSCCEECCSTHHH
T ss_pred -----------CCc--EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhC-C-CCCceEEEEcCCcc
Confidence 122 555555433 333333 568999999864311 1 11122 2 355322 1111001
Q ss_pred ccCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHh
Q 011381 425 LVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANA 461 (487)
Q Consensus 425 ~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~ 461 (487)
..++.-++..|.. +.| +.++++.+.+++.+++.
T Consensus 122 ~~nAa~lAa~Il~-~~d---~~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 122 AKNAGILAARMLS-IQN---PSLVEKLNQYESSLIQK 154 (163)
T ss_dssp HHHHHHHHHHHHH-TTC---THHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHh-CCC---HHHHHHHHHHHHHHHHH
Confidence 2466666666654 445 68888888888887753
No 98
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=43.59 E-value=1.4e+02 Score=25.86 Aligned_cols=35 Identities=6% Similarity=-0.013 Sum_probs=22.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcC-CCEEEEEecC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQY-NFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~-GH~Vt~~~~~ 49 (487)
+||+++..++.+ -+.++.++|.+.. +|+|..+.+.
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEES
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeC
Confidence 478887766543 3666777885432 5899776654
No 99
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=43.00 E-value=32 Score=26.50 Aligned_cols=65 Identities=12% Similarity=0.062 Sum_probs=44.2
Q ss_pred cccCcccccccccCchh---------HHHHHhhCCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHH
Q 011381 365 LSHGSTGGFLSHCGWNS---------ILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYA 435 (487)
Q Consensus 365 L~~~~~~~~I~HgG~gt---------~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av 435 (487)
+..++ ++|--.|..| +..|...|+|+|++=..+.+. .-..+++ .+.- .+. .+.+.|.++|
T Consensus 36 I~~~~--~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~-~a~~-iV~------Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDAD--AVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEA-VSSE-VVG------WNPHCIRDAL 104 (111)
T ss_dssp SSSCS--EEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHH-HCSE-EEC------SCHHHHHHHH
T ss_pred cccCC--EEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHh-hCce-ecc------CCHHHHHHHH
Confidence 56777 8888888887 677889999998887666541 1122333 2222 221 8899999999
Q ss_pred HHhcc
Q 011381 436 KGLIQ 440 (487)
Q Consensus 436 ~~vl~ 440 (487)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 88754
No 100
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=42.99 E-value=50 Score=24.92 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=29.5
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCC
Q 011381 281 VLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSP 318 (487)
Q Consensus 281 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 318 (487)
-||+-|.| +++.+.+|+..+++.|.+++..++..
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57888876 89999999999999999999887764
No 101
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=42.89 E-value=1.6e+02 Score=25.36 Aligned_cols=35 Identities=6% Similarity=-0.041 Sum_probs=21.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcC-CCEEEEEecC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQY-NFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~-GH~Vt~~~~~ 49 (487)
+||+++..+.-+ -+.+|..++.+.. +|+|..+.+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~ 36 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSN 36 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEES
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeC
Confidence 367777755443 4777888884421 4888766654
No 102
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=42.72 E-value=58 Score=28.07 Aligned_cols=39 Identities=18% Similarity=-0.047 Sum_probs=34.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
.+.+|++.+.++-.|-....-++..|.. +|++|.+.+..
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~-~G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLES-GGFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHH-TTCEEEECCSS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHH-CCCEEEECCCC
Confidence 3458999999999999999999999965 59999988864
No 103
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=42.35 E-value=1.4e+02 Score=24.55 Aligned_cols=136 Identities=15% Similarity=0.131 Sum_probs=71.9
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCc
Q 011381 282 LFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQ 361 (487)
Q Consensus 282 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq 361 (487)
|-|-+||.+ +....++....|+.++.++=..+-+-.. .|+.+.+ |+-+
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~saHR-------------------~p~~~~~-----------~~~~ 49 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASAHR-------------------TPELVEE-----------IVKN 49 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------CHHHHHH-----------HHHH
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC-------------------CHHHHHH-----------HHHh
Confidence 445567654 6777888999999999875443333322 4554321 1100
Q ss_pred ccccccCcccccccccCchhHHHHHh---hCCceecccccccchhhhHh--hhc-ccceeEEEeecCCCccCHHHHHHHH
Q 011381 362 AQVLSHGSTGGFLSHCGWNSILESIV---HGVPIIAWPLYSEQKMNAVL--LTD-DLKVSFRVKVNENGLVGREDIANYA 435 (487)
Q Consensus 362 ~~iL~~~~~~~~I~HgG~gt~~eal~---~GvP~v~~P~~~DQ~~na~~--v~~-~~G~G~~l~~~~~~~~~~~~l~~av 435 (487)
. ..+ ++|.=.|.-.-+-++. .-+|+|.+|....-...... +.. =.|+.+..-. -|+..++.-++..|
T Consensus 50 a----~~~--ViIa~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~gvpVatV~-I~~~~nAa~lA~~I 122 (157)
T 2ywx_A 50 S----KAD--VFIAIAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVG-IDRGENAAILALEI 122 (157)
T ss_dssp C----CCS--EEEEEEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCTTSCCEECC-TTCHHHHHHHHHHH
T ss_pred c----CCC--EEEEEcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCCCCeeEEEe-cCCcHHHHHHHHHH
Confidence 0 012 5666555443333333 35899999983211111111 111 0143322111 01125676676666
Q ss_pred HHhccCchhHHHHHHHHHHHHHHHH
Q 011381 436 KGLIQGEEGKLLRKKMRALKDAAAN 460 (487)
Q Consensus 436 ~~vl~~~~~~~~~~~a~~l~~~~~~ 460 (487)
. -+.| +.++++.+..++.+++
T Consensus 123 l-~~~d---~~l~~kl~~~r~~~~~ 143 (157)
T 2ywx_A 123 L-ALKD---ENIAKKLIEYREKMKK 143 (157)
T ss_dssp H-TTTC---HHHHHHHHHHHHHHHH
T ss_pred H-hcCC---HHHHHHHHHHHHHHHH
Confidence 5 3456 7899999888888876
No 104
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=42.23 E-value=31 Score=29.71 Aligned_cols=36 Identities=17% Similarity=0.133 Sum_probs=30.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcC-CCEEEEEecC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQY-NFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~-GH~Vt~~~~~ 49 (487)
|||++.-.++.|-+. ...|.+.|. ++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~-~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALR-EMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHH-TCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHH-hccCCEEEEEECc
Confidence 578888888877766 899999995 56 9999999877
No 105
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=41.92 E-value=38 Score=30.46 Aligned_cols=39 Identities=15% Similarity=-0.036 Sum_probs=34.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
.+.+|++.+.++-.|-....-++..|.. +|++|.+.+..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~-~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRA-NGYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHH-TTCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCC
Confidence 4568999999999999999999999965 59999988864
No 106
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=41.53 E-value=86 Score=27.21 Aligned_cols=40 Identities=13% Similarity=-0.081 Sum_probs=33.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
.++.+|++.+.++-.|-....-++..|.. +|++|.+.+..
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~-~G~~Vi~LG~~ 129 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGA-NGFQIVDLGVD 129 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHH-TSCEEEECCSS
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHH-CCCeEEEcCCC
Confidence 34569999999999999999999999965 59999988765
No 107
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=41.39 E-value=53 Score=31.41 Aligned_cols=36 Identities=19% Similarity=0.067 Sum_probs=29.9
Q ss_pred cEEEEEcC-CCccChHHHHHHHHHHHhcCCCEEEEEec
Q 011381 12 AYVAMVPT-PGIGHLIPLVELAKRLVHQYNFLVTIFIP 48 (487)
Q Consensus 12 ~~il~~~~-~~~GH~~p~l~La~~L~~~~GH~Vt~~~~ 48 (487)
++|+++.. ++.|-..-...||..|+++ |++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~-g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQ-GKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCCeEEEeC
Confidence 35655544 7899999999999999876 999999987
No 108
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=40.49 E-value=1.3e+02 Score=26.17 Aligned_cols=39 Identities=15% Similarity=-0.004 Sum_probs=23.4
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCC
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTI 50 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~ 50 (487)
..++||+++..++-+ -+.+|..++....+++|..+.+..
T Consensus 10 ~~~~ri~vl~SG~gs---nl~all~~~~~~~~~eI~~Vis~~ 48 (215)
T 3da8_A 10 SAPARLVVLASGTGS---LLRSLLDAAVGDYPARVVAVGVDR 48 (215)
T ss_dssp CSSEEEEEEESSCCH---HHHHHHHHSSTTCSEEEEEEEESS
T ss_pred CCCcEEEEEEeCChH---HHHHHHHHHhccCCCeEEEEEeCC
Confidence 446799888766543 345555555322356887776553
No 109
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=39.70 E-value=1.3e+02 Score=25.05 Aligned_cols=142 Identities=18% Similarity=0.184 Sum_probs=74.7
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccC
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSW 358 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ 358 (487)
+|.|-|-+||.+ +....++....|+.++.++-..+-+-.. .|+.+.+-.+
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR-------------------~p~~~~~~~~--------- 55 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAHR-------------------TPKETVEFVE--------- 55 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHHHHH---------
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcccC-------------------CHHHHHHHHH---------
Confidence 456777788755 6777888999999999876544444332 4543321100
Q ss_pred CCcccccccCcccccccccCchhHHHHHh---hCCceecccccccch-hhhHhh--h--cccceeEE-EeecCCCccCHH
Q 011381 359 APQAQVLSHGSTGGFLSHCGWNSILESIV---HGVPIIAWPLYSEQK-MNAVLL--T--DDLKVSFR-VKVNENGLVGRE 429 (487)
Q Consensus 359 ~pq~~iL~~~~~~~~I~HgG~gt~~eal~---~GvP~v~~P~~~DQ~-~na~~v--~--~~~G~G~~-l~~~~~~~~~~~ 429 (487)
... -...+ +||.=.|.-.-+-++. .-+|+|.+|...-.. .....+ . - -|+.+. +...+.+..++.
T Consensus 56 --~a~-~~g~~--ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp-~GvPVatV~I~~a~~~nAa 129 (169)
T 3trh_A 56 --NAD-NRGCA--VFIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMP-GGVPVACTAIGKAGAKNAA 129 (169)
T ss_dssp --HHH-HTTEE--EEEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCC-TTSCCEECCSTHHHHHHHH
T ss_pred --HHH-hCCCc--EEEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCC-CCCceEEEecCCccchHHH
Confidence 000 01122 5555555433333322 358999999864211 111111 1 2 254321 211100124555
Q ss_pred HHHHHHHHhccCchhHHHHHHHHHHHHHHHH
Q 011381 430 DIANYAKGLIQGEEGKLLRKKMRALKDAAAN 460 (487)
Q Consensus 430 ~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~ 460 (487)
-++..|.. +.| +.++++.+..++.+++
T Consensus 130 ~lAa~Il~-~~d---~~l~~kl~~~r~~~~~ 156 (169)
T 3trh_A 130 ILAAQIIA-LQD---KSIAQKLVQQRTAKRE 156 (169)
T ss_dssp HHHHHHHH-TTC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCC---HHHHHHHHHHHHHHHH
Confidence 56655544 456 7899998888888875
No 110
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=39.57 E-value=34 Score=28.79 Aligned_cols=38 Identities=11% Similarity=-0.004 Sum_probs=30.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
+||++.-.++.|=+. ...|.+.|.+ +|++|.++.++.-
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~-~g~~V~vv~T~~A 43 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKS-KFDEVNVIASTNG 43 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTT-TCSEEEEEECTGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHH-CCCEEEEEECcCH
Confidence 478888878877665 8899999965 4999999998854
No 111
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=39.33 E-value=1.4e+02 Score=29.23 Aligned_cols=92 Identities=7% Similarity=-0.040 Sum_probs=50.0
Q ss_pred cccccCcccccccccCchh-----HHHHHhhCCceecccccccchhhhHhh-----hcccceeEEEeecCCCccCHHHHH
Q 011381 363 QVLSHGSTGGFLSHCGWNS-----ILESIVHGVPIIAWPLYSEQKMNAVLL-----TDDLKVSFRVKVNENGLVGREDIA 432 (487)
Q Consensus 363 ~iL~~~~~~~~I~HgG~gt-----~~eal~~GvP~v~~P~~~DQ~~na~~v-----~~~~G~G~~l~~~~~~~~~~~~l~ 432 (487)
.-|..++ ++|.--|.-. ..+|-..|+|+-+ .|++..+... .+ -++=+.+..+.....-+..|+
T Consensus 68 ~~l~~~~--lVi~at~~~~~n~~i~~~a~~~~i~vn~----~d~~e~~~~~~pa~~~~-~~l~iaIsT~Gksp~la~~ir 140 (457)
T 1pjq_A 68 TLLDSCW--LAIAATDDDTVNQRVSDAAESRRIFCNV----VDAPKAASFIMPSIIDR-SPLMVAVSSGGTSPVLARLLR 140 (457)
T ss_dssp GGGTTCS--EEEECCSCHHHHHHHHHHHHHTTCEEEE----TTCTTSSSEECCEEEEE-TTEEEEEECTTSCHHHHHHHH
T ss_pred cccCCcc--EEEEcCCCHHHHHHHHHHHHHcCCEEEE----CCCcccCceEeeeEEEe-CCeEEEEECCCCChHHHHHHH
Confidence 4456677 7777677653 3445567888622 2334333332 22 233333333320112246788
Q ss_pred HHHHHhccCchhHHHHHHHHHHHHHHHHhc
Q 011381 433 NYAKGLIQGEEGKLLRKKMRALKDAAANAL 462 (487)
Q Consensus 433 ~av~~vl~~~~~~~~~~~a~~l~~~~~~~~ 462 (487)
+.|++.|.. .-..+.+.+.++++++++..
T Consensus 141 ~~ie~~l~~-~~~~~~~~~~~~R~~~~~~~ 169 (457)
T 1pjq_A 141 EKLESLLPQ-HLGQVARYAGQLRARVKKQF 169 (457)
T ss_dssp HHHHHHSCT-THHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcch-hHHHHHHHHHHHHHHHHhhC
Confidence 888888864 22356777777888777643
No 112
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=39.16 E-value=63 Score=29.91 Aligned_cols=38 Identities=16% Similarity=0.311 Sum_probs=32.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
-+++..-|+.|-..=.+.+|...+.+ |..|.|++.+..
T Consensus 70 l~li~G~pG~GKTtl~l~ia~~~a~~-g~~vl~~slE~s 107 (315)
T 3bh0_A 70 FVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMG 107 (315)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTT-TCEEEEEESSSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEECCCC
Confidence 46777889999999999999998765 899999998743
No 113
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=38.88 E-value=1.7e+02 Score=25.32 Aligned_cols=114 Identities=16% Similarity=0.106 Sum_probs=70.4
Q ss_pred HHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCccccccccc
Q 011381 298 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHC 377 (487)
Q Consensus 298 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~Hg 377 (487)
.++.+.++..+.+++.+.+...- +|+.+....+. ..|-=|++ +.=...
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~~I-------------------L~~~~l~~~~~-----------~~iNiHpS--LLP~yr 119 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFMSI-------------------LPEKFVTDWHH-----------KIINIHPS--LLPSFK 119 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCCSC-------------------CCHHHHHHTTT-----------SEEEEESS--CTTTTC
T ss_pred HHHHHHHHHhCCCEEEEeCCceE-------------------eCHHHHhhccC-----------CeEEECcc--cccCCC
Confidence 56778888888898887776543 77776654432 22333666 555667
Q ss_pred CchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHH
Q 011381 378 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 454 (487)
Q Consensus 378 G~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l 454 (487)
|...+..|+.+|....++-++. +..+-...+.. .-+.+... -|.++|.+.+.++-. +-|.+..+.+
T Consensus 120 G~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q---~~v~I~~~----dt~~~L~~rl~~~e~----~ll~~~l~~~ 187 (215)
T 3kcq_A 120 GLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIMQ---AAVPVLRE----DTAESLASRILAAEH----VCYPKGVKLI 187 (215)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE---EEeecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999999999999987777542 33333332222 12333333 488888887765432 3454444443
No 114
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=38.64 E-value=32 Score=27.88 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=26.1
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 7 KQIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 7 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
...+.++|+++..+..| ..+++.|.++ |++|+++...
T Consensus 15 ~~~~~~~v~IiG~G~iG-----~~la~~L~~~-g~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLG-----SLIANLASSS-GHSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEESC
T ss_pred cccCCCcEEEECCCHHH-----HHHHHHHHhC-CCeEEEEECC
Confidence 44567899999755444 5678888665 9999988754
No 115
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=38.47 E-value=1.6e+02 Score=26.92 Aligned_cols=104 Identities=13% Similarity=0.052 Sum_probs=65.9
Q ss_pred HHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccc
Q 011381 297 LNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~H 376 (487)
-.++++.++..+.+++...+...- +|+.+....+.. .|-=|++ +.=..
T Consensus 154 ~~~~~~~l~~~~~Dlivlagym~i-------------------l~~~~l~~~~~~-----------~iNiHpS--lLP~~ 201 (287)
T 3nrb_A 154 ESQIKNIVTQSQADLIVLARYMQI-------------------LSDDLSAFLSGR-----------CINIHHS--FLPGF 201 (287)
T ss_dssp HHHHHHHHHHHTCSEEEESSCCSC-------------------CCHHHHHHHTTS-----------EEEEESS--CTTTT
T ss_pred HHHHHHHHHHhCCCEEEhhhhhhh-------------------cCHHHHhhccCC-----------eEEECcc--cccCC
Confidence 346888888888898887776543 788777655432 2223555 55556
Q ss_pred cCchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhc
Q 011381 377 CGWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 377 gG~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl 439 (487)
.|.+.+..|+.+|+...++-.+. +..+-...+.. .-+.+... -|.++|.+.+.++-
T Consensus 202 rG~~p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q---~~v~i~~~----dt~~~L~~r~~~~e 259 (287)
T 3nrb_A 202 KGAKPYHQAHTRGVKLIGATAHFVTADLDEGPIIAQ---DVEHVSHR----DSAEDLVRKGRDIE 259 (287)
T ss_dssp CSSCHHHHHHHHTCSEEEEEEEECCSSSSCCCEEEE---EEEECCTT----CCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEE---EEEecCCC----CCHHHHHHHHHHHH
Confidence 79999999999999988877642 22222222222 12233333 48888888887653
No 116
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=38.29 E-value=2.6e+02 Score=26.41 Aligned_cols=34 Identities=6% Similarity=-0.155 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
+.++|+++..+.. .+.+++++.+. |++|.++..+
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~~-G~~~v~v~~~ 39 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKEL-GIHTIAGTMP 39 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHHH-TCEEEEEECS
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHHC-CCEEEEEcCC
Confidence 4568999876654 36688888665 9999988654
No 117
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=37.09 E-value=2.1e+02 Score=26.28 Aligned_cols=107 Identities=14% Similarity=0.121 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCccccc
Q 011381 294 QEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGF 373 (487)
Q Consensus 294 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~ 373 (487)
.+.-.++++.++..+.++|...+...- +|+.+....+.. .|-=|++ +.
T Consensus 167 ~~~~~~~~~~l~~~~~DliVlagym~I-------------------L~~~~l~~~~~~-----------~INiHpS--lL 214 (302)
T 3o1l_A 167 EPAFAEVSRLVGHHQADVVVLARYMQI-------------------LPPQLCREYAHQ-----------VINIHHS--FL 214 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSCCSC-------------------CCTTHHHHTTTC-----------EEEEESS--CT
T ss_pred HHHHHHHHHHHHHhCCCEEEHhHhhhh-------------------cCHHHHhhhhCC-----------eEEeCcc--cc
Confidence 334456888888888888887776543 777766554432 2223555 55
Q ss_pred ccccCchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhc
Q 011381 374 LSHCGWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 374 I~HgG~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl 439 (487)
=...|.+.+..|+.+|+...++-... +..+-...+.. .-+.+... -|.++|.+.+.++-
T Consensus 215 P~frG~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q---~~v~I~~~----dt~~~L~~r~~~~e 275 (302)
T 3o1l_A 215 PSFVGAKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQ---DVVRVSHR----DSIENMVRFGRDVE 275 (302)
T ss_dssp TSSCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEEE---EEEecCCC----CCHHHHHHHHHHHH
Confidence 55679999999999999988877642 22232222222 12233333 48888888887653
No 118
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=36.66 E-value=32 Score=29.88 Aligned_cols=39 Identities=8% Similarity=-0.025 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCccChHH-HHHHHHHHHhcCCCEEEEEecCCC
Q 011381 11 RAYVAMVPTPGIGHLIP-LVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p-~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
.+||++.-.++ +..+- ...|.+.|.++ |++|.++.++.-
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~-g~eV~vv~T~~A 44 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAE-GAEVRPVVSYTV 44 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHT-TCEEEEEECC--
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhC-CCEEEEEEehHH
Confidence 34788887787 55665 88999999765 999999998743
No 119
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=36.47 E-value=1.9e+02 Score=28.55 Aligned_cols=39 Identities=8% Similarity=-0.055 Sum_probs=32.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
-+++...|+.|-..=.+.+|..++.+.|..|.|++.+..
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s 282 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEES 282 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSC
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCC
Confidence 467777799999999999999996544899999998754
No 120
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=36.37 E-value=1.9e+02 Score=25.11 Aligned_cols=115 Identities=13% Similarity=0.115 Sum_probs=69.9
Q ss_pred HHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccc
Q 011381 297 LNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~H 376 (487)
-.++++.++..+.+++.+.+...- +|+.+....+.. .|-=|++ +.=..
T Consensus 72 d~~~~~~l~~~~~Dliv~agy~~i-------------------l~~~~l~~~~~~-----------~iNiHpS--LLP~y 119 (215)
T 3tqr_A 72 ESTLQKTIDHYDPKLIVLAGFMRK-------------------LGKAFVSHYSGR-----------MINIHPS--LLPKY 119 (215)
T ss_dssp HHHHHHHHHTTCCSEEEESSCCSC-------------------CCHHHHHHTTTS-----------EEEEESS--STTTT
T ss_pred HHHHHHHHHhcCCCEEEEccchhh-------------------CCHHHHhhccCC-----------eEEeCcc--cCCCC
Confidence 356888888888898887776543 777766544322 2233555 55556
Q ss_pred cCchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHH
Q 011381 377 CGWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 454 (487)
Q Consensus 377 gG~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l 454 (487)
.|...+..|+.+|....++-++. +..+....+.. .-+.+... -|.++|.+.+.++-. +-|.+..+.+
T Consensus 120 rG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~~ 188 (215)
T 3tqr_A 120 TGLNTHERALAAGETEHGVSVHYVTEDLDAGPLICQ---ARLSITPQ----DTPETLKTRVHALEH----IIYPEVLSWF 188 (215)
T ss_dssp CSSCHHHHHHHTTCSEEEEEEEECC-CTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE---EEEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 79999999999999987776542 33333332222 12333333 488888887765432 3454444443
No 121
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=36.12 E-value=28 Score=27.27 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
+.|+|+++.. |.+- ..+++.|.++ ||+|+++...
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~-g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEK-GHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhC-CCeEEEEECC
Confidence 3578998854 5443 4678899765 9999988653
No 122
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=35.90 E-value=1.7e+02 Score=26.75 Aligned_cols=104 Identities=12% Similarity=0.063 Sum_probs=65.7
Q ss_pred HHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccc
Q 011381 297 LNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~H 376 (487)
-.++++.++..+.++|...+...- +|+.+....+.. .|-=|++ +.=..
T Consensus 155 ~~~~~~~l~~~~~Dlivlagy~~i-------------------l~~~~l~~~~~~-----------~iNiHpS--lLP~~ 202 (288)
T 3obi_A 155 EAAITALIAQTHTDLVVLARYMQI-------------------LSDEMSARLAGR-----------CINIHHS--FLPGF 202 (288)
T ss_dssp HHHHHHHHHHHTCCEEEESSCCSC-------------------CCHHHHHHTTTS-----------EEEEEEE--CSSCC
T ss_pred HHHHHHHHHhcCCCEEEhhhhhhh-------------------CCHHHHhhhcCC-----------eEEeCcc--cccCC
Confidence 346888888888898887776543 788776554432 2223444 44455
Q ss_pred cCchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhc
Q 011381 377 CGWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 377 gG~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl 439 (487)
.|.+.+..|+.+|+...++-.+. +..+-...+.. .-+.+... -|.++|.+.+.++-
T Consensus 203 rG~~p~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~Q---~~v~i~~~----dt~~~L~~r~~~~e 260 (288)
T 3obi_A 203 KGAKPYHQAFDRGVKLIGATAHYVTSALDEGPIIDQ---DVERISHR----DTPADLVRKGRDIE 260 (288)
T ss_dssp CSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHcCCCEEEEEEEEECCCCcCCCeEEE---EEEecCCC----CCHHHHHHHHHHHH
Confidence 79999999999999988777542 22232222222 12333333 48888888887653
No 123
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=35.89 E-value=40 Score=29.28 Aligned_cols=38 Identities=8% Similarity=0.184 Sum_probs=31.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
++||++...++.+-+. ...|.+.|.+ .| +|.++.++.-
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~-~g-~V~vv~T~~A 56 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTE-WA-EVRAVVTKSS 56 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHT-TS-EEEEEECTGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhc-CC-CEEEEEcchH
Confidence 4689998889988776 8999999966 48 9999998844
No 124
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=35.70 E-value=1.1e+02 Score=26.64 Aligned_cols=37 Identities=5% Similarity=0.010 Sum_probs=22.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
+++||+++..+.-+ .+.+|..+..+..+++|..+.+.
T Consensus 4 ~~~riavl~SG~Gs---nl~all~~~~~~~~~eI~~Vis~ 40 (215)
T 3tqr_A 4 EPLPIVVLISGNGT---NLQAIIGAIQKGLAIEIRAVISN 40 (215)
T ss_dssp CCEEEEEEESSCCH---HHHHHHHHHHTTCSEEEEEEEES
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHcCCCCEEEEEEeC
Confidence 46789888755533 45566666632125899877653
No 125
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=35.64 E-value=15 Score=33.56 Aligned_cols=53 Identities=15% Similarity=0.115 Sum_probs=37.3
Q ss_pred cCcccccccccCchhHHHHHhh------CCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhcc
Q 011381 367 HGSTGGFLSHCGWNSILESIVH------GVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQ 440 (487)
Q Consensus 367 ~~~~~~~I~HgG~gt~~eal~~------GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~ 440 (487)
.++ ++|.=||=||+.++... ++|++++|.. . +|. ..+ +.++++.+++++++.
T Consensus 35 ~~D--~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lgf-----l~~---~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 35 EPE--IVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LGF-----YAD---WRPAEADKLVKLLAK 92 (272)
T ss_dssp SCS--EEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CCS-----SCC---BCGGGHHHHHHHHHT
T ss_pred CCC--EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CCc-----CCc---CCHHHHHHHHHHHHc
Confidence 455 99999999999999875 8899988852 1 121 011 456777778877776
Q ss_pred C
Q 011381 441 G 441 (487)
Q Consensus 441 ~ 441 (487)
+
T Consensus 93 g 93 (272)
T 2i2c_A 93 G 93 (272)
T ss_dssp T
T ss_pred C
Confidence 4
No 126
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=35.59 E-value=68 Score=31.46 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=33.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
--+++...|+.|=..=++.++..++...|..|.|++.+..
T Consensus 204 ~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s 243 (454)
T 2r6a_A 204 DLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMS 243 (454)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 3577788899999999999999997644899999997743
No 127
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=34.17 E-value=2.3e+02 Score=24.51 Aligned_cols=116 Identities=16% Similarity=0.104 Sum_probs=71.7
Q ss_pred HHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccc
Q 011381 297 LNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~H 376 (487)
-.++.+.++..+.+++.+.+...- +|+.+....+.. .|-=|++ +.=..
T Consensus 78 d~~~~~~l~~~~~Dlivlagy~~i-------------------L~~~~l~~~~~~-----------~iNiHpS--LLP~y 125 (215)
T 3da8_A 78 DVAITAATAAHEPDLVVSAGFMRI-------------------LGPQFLSRFYGR-----------TLNTHPA--LLPAF 125 (215)
T ss_dssp HHHHHHHHHTTCCSEEEEEECCSC-------------------CCHHHHHHHTTT-----------EEEEESS--CTTSS
T ss_pred hHHHHHHHHhhCCCEEEEcCchhh-------------------CCHHHHhhccCC-----------eEEeCcc--cccCC
Confidence 356888888999999888887544 778776554432 2223555 55555
Q ss_pred cCchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHH
Q 011381 377 CGWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 454 (487)
Q Consensus 377 gG~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l 454 (487)
.|...+..|+.+|....++-++. +..+-...+.. .-+.+... -|.++|.+.+.++-. +-|.+..+.+
T Consensus 126 rG~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q---~~v~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~~ 194 (215)
T 3da8_A 126 PGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQ---QPVPVLDG----DDEETLHERIKVTER----RLLVAAVAAL 194 (215)
T ss_dssp CSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCchHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE---EEeecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 78999999999999987776542 33333322222 12233333 488888887765432 3455554444
Q ss_pred H
Q 011381 455 K 455 (487)
Q Consensus 455 ~ 455 (487)
.
T Consensus 195 ~ 195 (215)
T 3da8_A 195 A 195 (215)
T ss_dssp H
T ss_pred H
Confidence 3
No 128
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=33.93 E-value=2e+02 Score=26.16 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=65.2
Q ss_pred HHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccc
Q 011381 297 LNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~H 376 (487)
-.++++.++..+.+++...+...- +|+.+....+.. .|-=|++ +.=..
T Consensus 155 ~~~~~~~l~~~~~Dlivla~y~~i-------------------l~~~~l~~~~~~-----------~iNiHpS--lLP~~ 202 (286)
T 3n0v_A 155 ERKVLQVIEETGAELVILARYMQV-------------------LSPELCRRLDGW-----------AINIHHS--LLPGF 202 (286)
T ss_dssp HHHHHHHHHHHTCSEEEESSCCSC-------------------CCHHHHHHTTTS-----------EEEEEEC--SSTTC
T ss_pred HHHHHHHHHhcCCCEEEecccccc-------------------cCHHHHhhhcCC-----------eEEeccc--cccCC
Confidence 345888888888888887776543 778776554432 2223444 44456
Q ss_pred cCchhHHHHHhhCCceecccccc-c-chhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhc
Q 011381 377 CGWNSILESIVHGVPIIAWPLYS-E-QKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 377 gG~gt~~eal~~GvP~v~~P~~~-D-Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl 439 (487)
.|.+.+..|+.+|+...++-.+. | ..+-...+.. .-+.+... -|.++|.+.+.++-
T Consensus 203 rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~Q---~~~~i~~~----dt~~~L~~r~~~~e 260 (286)
T 3n0v_A 203 KGAKPYHQAYNKGVKMVGATAHYINNDLDEGPIIAQ---GVEVVDHS----HYPEDLIAKGRDIE 260 (286)
T ss_dssp CCSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCCeEEEEEEEEcCCCCCCceeEE---EEEEcCCC----CCHHHHHHHHHHHH
Confidence 79999999999999988877642 2 2222222222 12233333 48888888887653
No 129
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=33.82 E-value=1.9e+02 Score=26.46 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=65.4
Q ss_pred HHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccc
Q 011381 297 LNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~H 376 (487)
-.++++.++..+.+++...+...- +|+.+....+.. .|-=|++ +.=..
T Consensus 160 ~~~~~~~l~~~~~Dlivla~y~~i-------------------l~~~~l~~~~~~-----------~iNiHpS--lLP~~ 207 (292)
T 3lou_A 160 EAQWLDVFETSGAELVILARYMQV-------------------LSPEASARLANR-----------AINIHHS--FLPGF 207 (292)
T ss_dssp HHHHHHHHHHHTCSEEEESSCCSC-------------------CCHHHHHHTTTS-----------EEEEEEE--CSSCC
T ss_pred HHHHHHHHHHhCCCEEEecCchhh-------------------CCHHHHhhhcCC-----------eEEeCCC--cCcCC
Confidence 346888888888888877776543 778776554432 2223455 44456
Q ss_pred cCchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhc
Q 011381 377 CGWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 377 gG~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl 439 (487)
.|.+.+..|+.+|+...++-.+. +..+-...+.. .-+.+... -|.++|.+.+.++-
T Consensus 208 rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q---~~v~i~~~----dt~~~L~~r~~~~e 265 (292)
T 3lou_A 208 KGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQ---VVERVDHS----YRPEQLLAVGRDVE 265 (292)
T ss_dssp CSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEEE---EEEEcCCC----CCHHHHHHHHHHHH
Confidence 79999999999999988777642 22232222222 12333333 48888888887653
No 130
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=33.05 E-value=40 Score=27.61 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=27.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
.+++++. ++.| +.|++++++.|.++ |.+|+++ ..
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~-~~~v~l~-g~ 57 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEI-GNDVTTL-HV 57 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHH-TCEEEEE-EE
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhc-CCcEEEE-Ee
Confidence 4788887 4444 99999999999776 8899988 43
No 131
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=32.52 E-value=2.4e+02 Score=24.25 Aligned_cols=115 Identities=13% Similarity=0.104 Sum_probs=70.4
Q ss_pred HHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccc
Q 011381 297 LNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~H 376 (487)
-.++++.++..+.+++.+.+...- +|+.+....+. ..|-=|++ +.=..
T Consensus 75 d~~~~~~l~~~~~Dliv~agy~~i-------------------l~~~~l~~~~~-----------~~iNiHpS--LLP~y 122 (209)
T 4ds3_A 75 EDAILAALDVLKPDIICLAGYMRL-------------------LSGRFIAPYEG-----------RILNIHPS--LLPLF 122 (209)
T ss_dssp HHHHHHHHHHHCCSEEEESSCCSC-------------------CCHHHHGGGTT-----------CEEEEESS--CTTSS
T ss_pred HHHHHHHHHhcCCCEEEEeccccC-------------------cCHHHHhhccC-----------CeEEECCc--cccCC
Confidence 356888889999998888776543 77776644332 23334666 66666
Q ss_pred cCchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHH
Q 011381 377 CGWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 454 (487)
Q Consensus 377 gG~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l 454 (487)
.|...+..|+.+|....++-++. +..+....+.. .-+.+... -|.++|.+.+.++-. +-|.+..+.+
T Consensus 123 rG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~~~----dt~~~L~~r~~~~~~----~ll~~~l~~~ 191 (209)
T 4ds3_A 123 PGLHTHQRALDAGMKLAGCTVHLVTEGMDEGPILAQ---AAVPVLDG----DTAETLAARVLKAEH----RLYPLALQKF 191 (209)
T ss_dssp CSSCHHHHHHHTTCSEEEEEEEECCC--CCCCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCeEEE---EEEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 89999999999999987776542 33333332222 12233333 488888887765422 3444444443
No 132
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=31.80 E-value=3e+02 Score=25.24 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhc-CCCEEEEEecC
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQ-YNFLVTIFIPT 49 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~-~GH~Vt~~~~~ 49 (487)
.+++||+++..+. || .+.+|..+.... .+.+|..+.+.
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn 141 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISN 141 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEES
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEEC
Confidence 4567998888655 55 577777776321 13688877664
No 133
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=31.63 E-value=19 Score=33.49 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=24.5
Q ss_pred ccccCcccccccccCchhHHHHHhh----CCceecccc
Q 011381 364 VLSHGSTGGFLSHCGWNSILESIVH----GVPIIAWPL 397 (487)
Q Consensus 364 iL~~~~~~~~I~HgG~gt~~eal~~----GvP~v~~P~ 397 (487)
....++ ++|.-||=||+.+++.. ++|+++++.
T Consensus 72 ~~~~~d--~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCE--LVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CC--CEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCC--EEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 344567 99999999999999854 899998874
No 134
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=31.48 E-value=59 Score=27.67 Aligned_cols=71 Identities=14% Similarity=0.125 Sum_probs=47.1
Q ss_pred hHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCch----hHHHHHHHHHHHHHHHH----hcCCCCChHHHHHHHH
Q 011381 405 AVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEE----GKLLRKKMRALKDAAAN----ALSPDGSSTKSLAQLA 476 (487)
Q Consensus 405 a~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~----~~~~~~~a~~l~~~~~~----~~~~~g~~~~~~~~~~ 476 (487)
+..=+. -|+|+.+ |+|+|.++|.+++.... ...|+ +.-.+-..+++ -++.+.....++++-+
T Consensus 105 ~~Fe~~-cGVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~ 174 (187)
T 3tl4_X 105 MGMNEN-SGVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEV 174 (187)
T ss_dssp HHHHHT-TTTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHH
T ss_pred HHHHHH-CCCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence 333344 7999754 78999999999996322 13455 55555555553 3556677777888888
Q ss_pred HHHhcCCCC
Q 011381 477 RIWKNPEFE 485 (487)
Q Consensus 477 ~~l~~~~~~ 485 (487)
-.|-+...+
T Consensus 175 l~lLGPKte 183 (187)
T 3tl4_X 175 LKLLGPKDE 183 (187)
T ss_dssp HHHHCSCCG
T ss_pred HHHcCCccc
Confidence 777776543
No 135
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=31.28 E-value=52 Score=30.57 Aligned_cols=35 Identities=17% Similarity=0.350 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
...|+|.|+-.+..| ..+|+.|+++ ||+|+++...
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~-G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEA-GYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHT-TCEEEEECSC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhC-CCeEEEEcCC
Confidence 456799999988888 5688899775 9999987533
No 136
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=31.11 E-value=34 Score=31.13 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEec
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIP 48 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~ 48 (487)
|||++. ++.|.+= ..|+++|.++ ||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~-G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNAR-GHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHC-CCEEEEEEC
Confidence 677655 5666554 5688999776 999998874
No 137
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=31.01 E-value=47 Score=30.96 Aligned_cols=34 Identities=15% Similarity=-0.016 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEe
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFI 47 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~ 47 (487)
+.++||.|+-.+..| |-.+|+.|.++ ||+|+..=
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~-G~~V~~~D 35 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEA-GFEVSGCD 35 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHT-TCEEEEEE
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhC-CCEEEEEc
Confidence 345689999999888 55699999765 99998754
No 138
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=30.98 E-value=2.8e+02 Score=27.38 Aligned_cols=25 Identities=16% Similarity=-0.027 Sum_probs=19.9
Q ss_pred CCceEEEeCCCcchHHHHHHHhCCCcEE
Q 011381 117 TRLVALVVDPFGSAAFDVANEVGVPAYV 144 (487)
Q Consensus 117 ~~~D~VI~D~~~~~~~~~A~~lgIP~v~ 144 (487)
.+||++|.... ...+|+++|||++.
T Consensus 400 ~~pDL~ig~~~---~~~~a~k~gIP~~~ 424 (483)
T 3pdi_A 400 YQADILIAGGR---NMYTALKGRVPFLD 424 (483)
T ss_dssp TTCSEEECCGG---GHHHHHHTTCCBCC
T ss_pred cCCCEEEECCc---hhHHHHHcCCCEEE
Confidence 39999999763 34689999999764
No 139
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=30.79 E-value=35 Score=30.27 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEec
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIP 48 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~ 48 (487)
.++|+|.|+..+..|- +||+.|.++ ||+|+.+..
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHT-TCEEEECSS
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHC-CCEEEEecC
Confidence 4578999999999885 689999765 999987653
No 140
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=30.38 E-value=3e+02 Score=26.60 Aligned_cols=137 Identities=15% Similarity=0.151 Sum_probs=73.9
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHH---HhhcCCCcee
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFL---DRTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~v~~ 355 (487)
.+.|-|-+||.+ +....++....|+.++.++-..+.+-.. .|+.+. ......+.
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~saHR-------------------~p~~~~~~~~~~~~~g~-- 321 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSAHK-------------------GPDETLRIKAEYEGDGI-- 321 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------CHHHHHHHHHHHHTTCC--
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeeccC-------------------CHHHHHHHHHHHHHCCC--
Confidence 467888889855 6777888999999999875444333322 454322 11111111
Q ss_pred ccCCCcccccccCcccccccccCc----hhHHHHHhhCCceecccccccchhhhHhhhc-c--cceeEEEeecCCCccCH
Q 011381 356 PSWAPQAQVLSHGSTGGFLSHCGW----NSILESIVHGVPIIAWPLYSEQKMNAVLLTD-D--LKVSFRVKVNENGLVGR 428 (487)
Q Consensus 356 ~~~~pq~~iL~~~~~~~~I~HgG~----gt~~eal~~GvP~v~~P~~~DQ~~na~~v~~-~--~G~G~~l~~~~~~~~~~ 428 (487)
.. ++|.=.|. .++..++ .-+|+|.+|....-......+.- + .|+.+..-.+. .++
T Consensus 322 ------------~~--viIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~g~pvatv~~~---~nA 383 (425)
T 2h31_A 322 ------------PT--VFVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSP---EGS 383 (425)
T ss_dssp ------------CE--EEEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCSSCCCEECCCH---HHH
T ss_pred ------------Ce--EEEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCCCCceEEecCc---hHH
Confidence 01 34444443 2445444 47899999985321111122211 0 24443222122 566
Q ss_pred HHHHHHHHHhccCchhHHHHHHHHHHHHHHHH
Q 011381 429 EDIANYAKGLIQGEEGKLLRKKMRALKDAAAN 460 (487)
Q Consensus 429 ~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~ 460 (487)
.-++..|. -+.+ +.++++.+..+.....
T Consensus 384 a~~A~~Il-~~~~---~~l~~kl~~~~~~~~~ 411 (425)
T 2h31_A 384 AQFAAQIF-GLSN---HLVWSKLRASILNTWI 411 (425)
T ss_dssp HHHHHHHH-HTTC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-ccCC---HHHHHHHHHHHHHHHH
Confidence 66776665 3556 6777777777766654
No 141
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=30.04 E-value=70 Score=27.21 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=29.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
||++.-.++.|-+ =...|.+.|.++ |++|.++.++
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~ 37 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEEL-DFSVDLVISR 37 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHT-TCEEEEEECH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEECh
Confidence 7888888998855 578999999765 9999999877
No 142
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=30.02 E-value=2.8e+02 Score=24.21 Aligned_cols=102 Identities=15% Similarity=0.074 Sum_probs=65.2
Q ss_pred HHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCccccccccc
Q 011381 298 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHC 377 (487)
Q Consensus 298 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~Hg 377 (487)
.++++.++..+.+++.+.+...- +|+.+....+.. .|-=|++ +.=-..
T Consensus 91 ~~~~~~l~~~~~Dliv~agy~~I-------------------L~~~~l~~~~~~-----------~iNiHpS--LLP~yr 138 (229)
T 3auf_A 91 AALAERLQAYGVDLVCLAGYMRL-------------------VRGPMLTAFPNR-----------ILNIHPS--LLPAFP 138 (229)
T ss_dssp HHHHHHHHHTTCSEEEESSCCSC-------------------CCHHHHHHSTTC-----------EEEEESS--CTTSSC
T ss_pred HHHHHHHHhcCCCEEEEcChhHh-------------------CCHHHHhhccCC-----------EEEEccC--cCcCCC
Confidence 45788888889998888776543 777766544322 2223555 555567
Q ss_pred CchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHh
Q 011381 378 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGL 438 (487)
Q Consensus 378 G~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~v 438 (487)
|...+..|+.+|....++-+.. +..+....+.. .-+.+... -|.++|.+.+.++
T Consensus 139 G~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~~~----dt~~~L~~rl~~~ 194 (229)
T 3auf_A 139 GLEAQRQALEHGVKVAGCTVHFVTAGVDEGPIILQ---AAVPVLEG----DTVEDLRRRILAE 194 (229)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHH
T ss_pred CcCHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEE---EEEecCCC----CCHHHHHHHHHHH
Confidence 9999999999999987776542 33343333333 12233333 4888888877654
No 143
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=29.65 E-value=23 Score=32.48 Aligned_cols=29 Identities=10% Similarity=0.045 Sum_probs=24.4
Q ss_pred cCcccccccccCchhHHHHHhh----CCceecccc
Q 011381 367 HGSTGGFLSHCGWNSILESIVH----GVPIIAWPL 397 (487)
Q Consensus 367 ~~~~~~~I~HgG~gt~~eal~~----GvP~v~~P~ 397 (487)
.++ ++|.=||=||+.+++.. ++|+++++.
T Consensus 63 ~~D--~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 63 QAD--LAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HCS--EEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CCC--EEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 456 99999999999999853 789999883
No 144
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=29.49 E-value=33 Score=27.70 Aligned_cols=32 Identities=9% Similarity=0.026 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
.||+++..+..| ..+++.|.++ ||+|+++...
T Consensus 4 ~~vlI~G~G~vG-----~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILA-----INTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHH-----HHHHHHHHHT-TCCEEEEECC
T ss_pred CcEEEECCCHHH-----HHHHHHHHHC-CCCEEEEECC
Confidence 478888544333 7889999765 9999998764
No 145
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=29.03 E-value=37 Score=29.76 Aligned_cols=38 Identities=13% Similarity=0.032 Sum_probs=32.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~ 50 (487)
|+|+|..-++-|=..=...||..|+++ |++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASD-YDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTT-CSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 578887778999999999999999765 99998886543
No 146
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=28.69 E-value=2.8e+02 Score=23.82 Aligned_cols=114 Identities=12% Similarity=0.072 Sum_probs=69.5
Q ss_pred HHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCccccccccc
Q 011381 298 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHC 377 (487)
Q Consensus 298 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~Hg 377 (487)
.++.+.++..+.+++.+.+...- +|+.+....+.. .+-=|++ +.=...
T Consensus 69 ~~~~~~l~~~~~Dliv~agy~~i-------------------l~~~~l~~~~~~-----------~iNiHpS--lLP~yr 116 (212)
T 1jkx_A 69 RELIHEIDMYAPDVVVLAGFMRI-------------------LSPAFVSHYAGR-----------LLNIHPS--LLPKYP 116 (212)
T ss_dssp HHHHHHHGGGCCSEEEESSCCSC-------------------CCHHHHHHTTTS-----------EEEEESS--CTTSCC
T ss_pred HHHHHHHHhcCCCEEEEeChhhh-------------------CCHHHHhhccCC-----------EEEEccC--cccCCC
Confidence 45788888888898887776543 777766544322 2223555 555567
Q ss_pred CchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHH
Q 011381 378 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 454 (487)
Q Consensus 378 G~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l 454 (487)
|...+..|+.+|....++-++. +..+....+.. .-+.+... -|.++|.+.+.++-. +-|.+..+.+
T Consensus 117 G~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~~ 184 (212)
T 1jkx_A 117 GLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQ---AKVPVFAG----DSEDDITARVQTQEH----AIYPLVISWF 184 (212)
T ss_dssp SSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CccHHHHHHHcCCCceEEEEEEEcccccCCCEEEE---EEEEcCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999999999999987776542 33333333322 12233333 488888887765422 3455444444
No 147
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=28.58 E-value=36 Score=32.38 Aligned_cols=29 Identities=28% Similarity=0.263 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEE
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIF 46 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~ 46 (487)
|||+|+--+--| +.+|..|+++ ||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhC-CCCEEEE
Confidence 789999877655 7889999765 9999987
No 148
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=27.79 E-value=2.7e+02 Score=23.37 Aligned_cols=139 Identities=16% Similarity=0.211 Sum_probs=78.1
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHH---hhcCCCcee
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD---RTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~v~~ 355 (487)
-|.|-|-+||.+ +....++....|+.++.++=..+-+-.. .|+.+.+ ....
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR-------------------~p~~l~~~~~~a~~----- 66 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHR-------------------TPDRMFEYAKNAEE----- 66 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------CHHHHHHHHHHTTT-----
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC-------------------CHHHHHHHHHHHHh-----
Confidence 468888899855 6777888999999999875444443322 4543321 1111
Q ss_pred ccCCCcccccccCcccccccccCch----hHHHHHhhCCceeccccccc--chhhh-Hhhhccc--ceeEEEeecCCCcc
Q 011381 356 PSWAPQAQVLSHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSE--QKMNA-VLLTDDL--KVSFRVKVNENGLV 426 (487)
Q Consensus 356 ~~~~pq~~iL~~~~~~~~I~HgG~g----t~~eal~~GvP~v~~P~~~D--Q~~na-~~v~~~~--G~G~~l~~~~~~~~ 426 (487)
..++ ++|.=.|.- ++..++ .-+|+|.+|.... ....+ --+.. . |+.+..-. -|+..
T Consensus 67 ----------~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~-Id~~~ 131 (183)
T 1o4v_A 67 ----------RGIE--VIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVA-INNAK 131 (183)
T ss_dssp ----------TTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECC-TTCHH
T ss_pred ----------CCCc--EEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEe-cCCch
Confidence 1122 455544432 444444 6689999998552 22222 11233 3 54432111 01235
Q ss_pred CHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHhc
Q 011381 427 GREDIANYAKGLIQGEEGKLLRKKMRALKDAAANAL 462 (487)
Q Consensus 427 ~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~ 462 (487)
++.-++..|.. +.| +.++++.+..++.+++.+
T Consensus 132 nAa~lAaqIla-~~d---~~l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 132 NAGILAASILG-IKY---PEIARKVKEYKERMKREV 163 (183)
T ss_dssp HHHHHHHHHHH-TTC---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-cCC---HHHHHHHHHHHHHHHHHH
Confidence 77777766653 556 788888888888777643
No 149
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=27.70 E-value=1.7e+02 Score=29.83 Aligned_cols=27 Identities=19% Similarity=0.399 Sum_probs=22.9
Q ss_pred ccccccccC------chhHHHHHhhCCceeccc
Q 011381 370 TGGFLSHCG------WNSILESIVHGVPIIAWP 396 (487)
Q Consensus 370 ~~~~I~HgG------~gt~~eal~~GvP~v~~P 396 (487)
.+++++|.| .+.+.+|.+.++|+|+|-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 448888888 668999999999999984
No 150
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=27.18 E-value=63 Score=29.17 Aligned_cols=30 Identities=13% Similarity=0.063 Sum_probs=23.5
Q ss_pred CceEEEeCCCcc------hHHHHHHHhCCCcEEEec
Q 011381 118 RLVALVVDPFGS------AAFDVANEVGVPAYVFFT 147 (487)
Q Consensus 118 ~~D~VI~D~~~~------~~~~~A~~lgIP~v~~~~ 147 (487)
+||+||+-.-.. -++.+|.+||+|.+....
T Consensus 112 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 899999665443 466899999999997654
No 151
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=26.76 E-value=3.6e+02 Score=24.49 Aligned_cols=105 Identities=10% Similarity=0.081 Sum_probs=54.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhc-CCCEEEEEecCCCCCCCCchhHHHHHhhcCCCCceEEeCCCCCCCCCCC
Q 011381 9 IPRAYVAMVPTPGIGHLIPLVELAKRLVHQ-YNFLVTIFIPTIDDGTGSSIQTIRQVLESLPTSISTIFLPPVSFDDLPD 87 (487)
Q Consensus 9 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~-~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (487)
.+++||+++..+. || .+.+|..+.... ...+|..+.+... ....+.+.+ ++.+..+|... .
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~--------~~~~~A~~~--gIp~~~~~~~~-----~ 154 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHP--------DFAPLAAQH--GLPFRHFPITA-----D 154 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSS--------TTHHHHHHT--TCCEEECCCCS-----S
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcH--------HHHHHHHHc--CCCEEEeCCCc-----C
Confidence 4467898887554 64 677777776321 1268877765432 122333322 57777665321 0
Q ss_pred CcchHHHHHHHHHHhHHHHHHHHHHHhccCCceEEEeCC-CcchHHHHHHHhCCCcEEE
Q 011381 88 DFQIETRITLTLVRSLSSLRDALKVLAESTRLVALVVDP-FGSAAFDVANEVGVPAYVF 145 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~-~~~~~~~~A~~lgIP~v~~ 145 (487)
. . . ...+.+.+.++++ ++|+||.-. +-.-...+-..+.-.++-+
T Consensus 155 ~---r--~-----~~~~~~~~~l~~~----~~Dlivla~y~~il~~~~l~~~~~~~iNi 199 (292)
T 3lou_A 155 T---K--A-----QQEAQWLDVFETS----GAELVILARYMQVLSPEASARLANRAINI 199 (292)
T ss_dssp C---H--H-----HHHHHHHHHHHHH----TCSEEEESSCCSCCCHHHHHHTTTSEEEE
T ss_pred C---H--H-----HHHHHHHHHHHHh----CCCEEEecCchhhCCHHHHhhhcCCeEEe
Confidence 0 0 0 0112344555555 999988654 3343445555555555543
No 152
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.71 E-value=80 Score=27.51 Aligned_cols=108 Identities=13% Similarity=0.112 Sum_probs=0.0
Q ss_pred cCCCCCeEEEEEeCCCcCCCH---HHHHHHHHHHHHcCCceEEEEeC-------------CCccccccccccccCCCCCC
Q 011381 274 DEQPSESVLFVCFGSGGTLSQ---EQLNELALGLEMSGQRFLWVAKS-------------PHEEAANATYFSVQSMKDPL 337 (487)
Q Consensus 274 ~~~~~~~~v~vs~Gs~~~~~~---~~~~~~~~al~~~~~~~i~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 337 (487)
...+.-+.|.|--||....++ +...++.+.|.+.+..+|.--+. ... ...
T Consensus 4 ~~~~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG--------------~~i 69 (216)
T 1ydh_A 4 NQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL--------------HVL 69 (216)
T ss_dssp -CCCSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC--------------CEE
T ss_pred CcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCC--------------cEE
Q ss_pred CCCchhHHHhhcCCC----ceeccCCCc-ccccccCcccccccccCchhHHHHH---------hhCCceecc
Q 011381 338 DFLPKGFLDRTKGVG----LVVPSWAPQ-AQVLSHGSTGGFLSHCGWNSILESI---------VHGVPIIAW 395 (487)
Q Consensus 338 ~~lp~~~~~~~~~~~----v~~~~~~pq-~~iL~~~~~~~~I~HgG~gt~~eal---------~~GvP~v~~ 395 (487)
+-+|+.+..+-...| +.++...+. ..++..-+-.+++--||.||+-|.. .+++|++.+
T Consensus 70 Gv~p~~l~~~e~~~~~~~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll 141 (216)
T 1ydh_A 70 GIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLL 141 (216)
T ss_dssp EEEEGGGHHHHCCSSCCSEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred EEechhcCccccccCCCCcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEe
No 153
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=26.66 E-value=62 Score=29.05 Aligned_cols=31 Identities=10% Similarity=0.052 Sum_probs=23.7
Q ss_pred CCceEEEeCCCcc------hHHHHHHHhCCCcEEEec
Q 011381 117 TRLVALVVDPFGS------AAFDVANEVGVPAYVFFT 147 (487)
Q Consensus 117 ~~~D~VI~D~~~~------~~~~~A~~lgIP~v~~~~ 147 (487)
.+||+||+-.-.. -++.+|.+||+|.+....
T Consensus 115 ~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 115 EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 3899999665443 466899999999987654
No 154
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=26.63 E-value=1.1e+02 Score=29.75 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=22.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCC-EEEEEec
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNF-LVTIFIP 48 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH-~Vt~~~~ 48 (487)
+|+||++..+++-| +||++|++. +. +-.++.+
T Consensus 3 ~mkvlviG~ggre~-----ala~~l~~s-~~v~~v~~~p 35 (431)
T 3mjf_A 3 AMNILIIGNGGREH-----ALGWKAAQS-PLADKIYVAP 35 (431)
T ss_dssp CEEEEEEECSHHHH-----HHHHHHTTC-TTEEEEEEEE
T ss_pred CcEEEEECCCHHHH-----HHHHHHHhC-CCCCEEEEEC
Confidence 58999998876544 689999765 54 3334444
No 155
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=26.62 E-value=67 Score=30.36 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=20.9
Q ss_pred cCcccccccccCchhH---HHHHhhCCceecc
Q 011381 367 HGSTGGFLSHCGWNSI---LESIVHGVPIIAW 395 (487)
Q Consensus 367 ~~~~~~~I~HgG~gt~---~eal~~GvP~v~~ 395 (487)
++| ++|++||.-+. ..|...|+|.++.
T Consensus 92 ~PD--vVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPV--CVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCS--EEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCC--EEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 477 99999998764 4567789999863
No 156
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=26.36 E-value=2.9e+02 Score=23.73 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=20.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhc-CCCEEEEEecCC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQ-YNFLVTIFIPTI 50 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~-~GH~Vt~~~~~~ 50 (487)
||+++..+.-+- +.+|..++.+. .+|+|..+.+..
T Consensus 2 riaVl~SG~Gs~---L~aLi~~~~~~~~~~~I~~Vvs~~ 37 (209)
T 1meo_A 2 RVAVLISGTGSN---LQALIDSTREPNSSAQIDIVISNK 37 (209)
T ss_dssp EEEEEESSSCTT---HHHHHHHHHSTTCSCEEEEEEESS
T ss_pred eEEEEEECCchH---HHHHHHHHhcCCCCcEEEEEEeCC
Confidence 677777555443 44555666332 168997776543
No 157
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=25.90 E-value=44 Score=28.68 Aligned_cols=37 Identities=3% Similarity=-0.034 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
+.||++...++.|=+. ...|.+.|.+ +|++|.++.++
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~-~g~~V~vv~T~ 44 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKS-FFKEIRVVMTK 44 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTT-TSSEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEEch
Confidence 3488888888877775 7899999965 59999999877
No 158
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=25.89 E-value=3.1e+02 Score=23.46 Aligned_cols=114 Identities=17% Similarity=0.134 Sum_probs=68.4
Q ss_pred HHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCccccccccc
Q 011381 298 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHC 377 (487)
Q Consensus 298 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~Hg 377 (487)
.++.+.++..+.+++.+.+...- +|+.+....+.. .|-=|++ +.=-..
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y~~i-------------------l~~~~l~~~~~~-----------~iNiHpS--LLP~yr 116 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGFMRI-------------------LSGPFVQKWNGK-----------MLNIHPS--LLPSFK 116 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESCCSC-------------------CCHHHHHHTTTS-----------EEEEESS--STTSSC
T ss_pred HHHHHHHHhcCCCEEEEcchhhh-------------------CCHHHHhhhcCC-----------EEEEccC--cCcCCC
Confidence 45788888888898888776543 777666444322 2223555 555567
Q ss_pred CchhHHHHHhhCCceeccccc-c-cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHH
Q 011381 378 GWNSILESIVHGVPIIAWPLY-S-EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 454 (487)
Q Consensus 378 G~gt~~eal~~GvP~v~~P~~-~-DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l 454 (487)
|...+..|+.+|....++-+. . +..+....+.. .-+.+... -|.++|.+.+.++-. +-|.+..+.+
T Consensus 117 G~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~~ 184 (209)
T 1meo_A 117 GSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQ---EAVPVKRG----DTVATLSERVKLAEH----KIFPAALQLV 184 (209)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCC---CCCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CccHHHHHHHcCCCcEEEEEEEECCCCcCCCEEEE---EEEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 899999999999998777653 2 33333333322 12233333 478888877765422 3455544444
No 159
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=25.85 E-value=1.3e+02 Score=25.99 Aligned_cols=39 Identities=10% Similarity=0.020 Sum_probs=30.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
-+++..-|+.|-..=.+.++...+.+.|..|.|++.+..
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~ 70 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEER 70 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCC
Confidence 567788899999999999887644444888999987743
No 160
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=25.83 E-value=47 Score=31.03 Aligned_cols=33 Identities=12% Similarity=0.084 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
+++|.|+-.+..| ..+|..|+++ ||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~-G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHEN-GEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhC-CCeEEEEeCC
Confidence 6799999988888 4788999776 9999988643
No 161
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=25.55 E-value=5.1e+02 Score=25.78 Aligned_cols=33 Identities=12% Similarity=-0.071 Sum_probs=22.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~ 50 (487)
.+++++. +-.-.++|++.|.+ .|.+|..+....
T Consensus 365 KrvaI~g-----d~~~~~~la~fL~e-lGm~vv~v~~~~ 397 (523)
T 3u7q_B 365 KRFALWG-----DPDFVMGLVKFLLE-LGCEPVHILCHN 397 (523)
T ss_dssp CEEEEEC-----SHHHHHHHHHHHHH-TTCEEEEEEETT
T ss_pred CEEEEEC-----CchHHHHHHHHHHH-cCCEEEEEEeCC
Confidence 4777763 33445677777765 599988877653
No 162
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=25.36 E-value=43 Score=33.50 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=27.6
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCC
Q 011381 8 QIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTI 50 (487)
Q Consensus 8 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~ 50 (487)
.+.|.||+++-.+.-| +.+|+.|.+ .|++||++.+..
T Consensus 39 ~~~KprVVIIGgG~AG-----l~~A~~L~~-~~~~VtLId~~~ 75 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGA-----ISFLKHIDT-KKYNVSIISPRS 75 (502)
T ss_dssp SCSSCEEEEECSSHHH-----HHHHHHSCT-TTCEEEEEESSS
T ss_pred CCCCCCEEEECCcHHH-----HHHHHHhhh-CCCcEEEECCCC
Confidence 3446699999866544 578899955 499999998654
No 163
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=25.17 E-value=3.3e+02 Score=23.44 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=65.2
Q ss_pred HHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCcccccccc
Q 011381 297 LNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~H 376 (487)
-.++++.++..+.+++.+.+...- +|+.+....+.. .|-=|++ +.=..
T Consensus 70 d~~~~~~l~~~~~Dliv~agy~~I-------------------l~~~~l~~~~~~-----------~iNiHpS--LLP~y 117 (211)
T 3p9x_A 70 EIEVVQQLKEKQIDFVVLAGYMRL-------------------VGPTLLGAYEGR-----------IVNIHPS--LLPAF 117 (211)
T ss_dssp HHHHHHHHHHTTCCEEEESSCCSC-------------------CCHHHHHHHTTS-----------EEEEESS--CTTSS
T ss_pred HHHHHHHHHhcCCCEEEEeCchhh-------------------cCHHHHhhccCC-----------eEEECCc--cCCCC
Confidence 356888899999998888776543 788776555432 1223555 55555
Q ss_pred cCchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHh
Q 011381 377 CGWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGL 438 (487)
Q Consensus 377 gG~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~v 438 (487)
.|...+..|+.+|....++-+.. +..+....+.. .-+.+... -|.++|.+.+.++
T Consensus 118 rG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~~~----dt~~~L~~rl~~~ 174 (211)
T 3p9x_A 118 PGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQ---EAVSIEEE----DTLETLTTKIQAV 174 (211)
T ss_dssp CSSCHHHHHHHTTCSEEEEEEEECCSSSSCSCEEEE---EEEECCTT----CCHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE---EEEecCCC----CCHHHHHHHHHHH
Confidence 78999999999999987776532 33333333322 12233333 4788887777654
No 164
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=25.15 E-value=1.2e+02 Score=23.63 Aligned_cols=34 Identities=9% Similarity=0.058 Sum_probs=23.9
Q ss_pred EEEcCCCcc--ChHHHHHHHHHHHhcCCCEE-EEEecC
Q 011381 15 AMVPTPGIG--HLIPLVELAKRLVHQYNFLV-TIFIPT 49 (487)
Q Consensus 15 l~~~~~~~G--H~~p~l~La~~L~~~~GH~V-t~~~~~ 49 (487)
+++..+.+| .....+.+|.++.+. ||+| +++...
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~-g~~v~~vff~~ 41 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEK-GHEIFRVFFYH 41 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHT-TCEEEEEEECG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhc-CCeeCEEEEec
Confidence 344444444 456778899999776 9999 887754
No 165
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=24.76 E-value=62 Score=28.98 Aligned_cols=30 Identities=10% Similarity=0.034 Sum_probs=23.3
Q ss_pred CceEEEeCCCcc------hHHHHHHHhCCCcEEEec
Q 011381 118 RLVALVVDPFGS------AAFDVANEVGVPAYVFFT 147 (487)
Q Consensus 118 ~~D~VI~D~~~~------~~~~~A~~lgIP~v~~~~ 147 (487)
+||+||+-.-.. -++.+|.+||+|.+....
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 899999665443 466899999999987654
No 166
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=24.61 E-value=84 Score=29.23 Aligned_cols=38 Identities=18% Similarity=0.255 Sum_probs=27.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 8 QIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 8 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
++++|||+|+..|.++- ..-++|.++ ||+|..+.+.+.
T Consensus 1 ~~~mmrIvf~Gtp~fa~-----~~L~~L~~~-~~~v~~Vvt~pd 38 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFSV-----PVLRRLIED-GYDVIGVVTQPD 38 (317)
T ss_dssp CCTTSEEEEECCSTTHH-----HHHHHHHHT-TCEEEEEECCCC
T ss_pred CCCceEEEEEeCCHHHH-----HHHHHHHHC-CCcEEEEEeCCC
Confidence 46789999999887653 334666565 999987776443
No 167
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=24.47 E-value=62 Score=28.01 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
+.||++...++.+=+ -...|.+.|.+..|++|.++.++.-
T Consensus 19 ~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A 58 (206)
T 1qzu_A 19 KFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERA 58 (206)
T ss_dssp SEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGG
T ss_pred CCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhH
Confidence 468888888887755 4699999996514999999998843
No 168
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=24.42 E-value=3.4e+02 Score=23.29 Aligned_cols=114 Identities=15% Similarity=0.080 Sum_probs=70.4
Q ss_pred HHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCccccccccc
Q 011381 298 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTGGFLSHC 377 (487)
Q Consensus 298 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~~~I~Hg 377 (487)
.++++.++..+.+++.+.+...- +|+.+....+.. .|-=|++ +.=...
T Consensus 72 ~~~~~~l~~~~~Dliv~a~y~~i-------------------l~~~~l~~~~~~-----------~iNiHpS--LLP~yr 119 (212)
T 3av3_A 72 SEILRELKGRQIDWIALAGYMRL-------------------IGPTLLSAYEGK-----------IVNIHPS--LLPAFP 119 (212)
T ss_dssp HHHHHHHHHTTCCEEEESSCCSC-------------------CCHHHHHHTTTC-----------EEEEESS--CTTSSC
T ss_pred HHHHHHHHhcCCCEEEEchhhhh-------------------CCHHHHhhhcCC-----------EEEEecC--cCCCCC
Confidence 46888888888898887776543 777766544322 2233566 555667
Q ss_pred CchhHHHHHhhCCceecccccc--cchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccCchhHHHHHHHHHH
Q 011381 378 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 454 (487)
Q Consensus 378 G~gt~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l 454 (487)
|...+..|+.+|....++-++. +..+....+.. .-+.+... -|.++|.+.+.++-. +-|.+..+.+
T Consensus 120 G~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~~~----dt~~~L~~r~~~~~~----~ll~~~l~~~ 187 (212)
T 3av3_A 120 GKDAIGQAYRAGVSETGVTVHYVDEGMDTGPVIAQ---RVVPIVPG----EPIEALEERIHQVEH----ELYPTVLRML 187 (212)
T ss_dssp STTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CcCHHHHHHHcCCCeEEEEEEEECCCCCCCCEEEE---EEEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999999999999987777542 33333333322 12233333 488888887765422 3455544444
No 169
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=24.08 E-value=62 Score=29.80 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=27.7
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 8 QIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 8 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
....|+|.|+-.+..| ..+|+.|+++ ||+|+++...
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~-G~~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKN-GFKVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHC-CCeEEEEeCC
Confidence 3456899999887776 5688999775 9999987543
No 170
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=24.01 E-value=1.7e+02 Score=22.88 Aligned_cols=48 Identities=10% Similarity=-0.034 Sum_probs=32.6
Q ss_pred hCCceecccccccchhhhHhhhcccceeEEEeecCCCccCHHHHHHHHHHhccC
Q 011381 388 HGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQG 441 (487)
Q Consensus 388 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~ 441 (487)
..+|+|++--..| ........+ .|+--.+.+. ++.+.|..+|+.++..
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~kP----~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAKP----FAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEESS----CCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeCC----CCHHHHHHHHHHHHHH
Confidence 4788888754444 334444555 5765555553 7899999999999864
No 171
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=23.82 E-value=52 Score=30.51 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
|+|+++-.++.|- .+|..|+++ ||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~-g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKT-GHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHT-TCEEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHhC-CCeEEEEeCC
Confidence 6899998888884 578888776 9999998754
No 172
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=23.67 E-value=46 Score=26.40 Aligned_cols=33 Identities=12% Similarity=0.199 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
+.||+++.++..| ..+|+.|.++ ||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~-g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLAS-DIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHT-TCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHC-CCCEEEEECC
Confidence 4689999876655 4788999765 9999998765
No 173
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=23.62 E-value=4.2e+02 Score=26.41 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=19.9
Q ss_pred CceEEEeCCCcchHHHHHHHhCCCcEE
Q 011381 118 RLVALVVDPFGSAAFDVANEVGVPAYV 144 (487)
Q Consensus 118 ~~D~VI~D~~~~~~~~~A~~lgIP~v~ 144 (487)
+||++|.+. ....+|+++|||++.
T Consensus 349 ~pDL~ig~~---~~~~~a~~~giP~~~ 372 (525)
T 3aek_B 349 APELILGTQ---MERNIAKKLGLPCAV 372 (525)
T ss_dssp CCSEEEECH---HHHHHHHHHTCCEEE
T ss_pred CCCEEEecc---hhHHHHHHcCCCEEE
Confidence 999999875 345688999999876
No 174
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=23.33 E-value=41 Score=30.82 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
.+++|.|+-.+..|. .+|+.|+++ ||+|+++...
T Consensus 14 ~~~~I~vIG~G~mG~-----~~A~~l~~~-G~~V~~~dr~ 47 (296)
T 3qha_A 14 EQLKLGYIGLGNMGA-----PMATRMTEW-PGGVTVYDIR 47 (296)
T ss_dssp -CCCEEEECCSTTHH-----HHHHHHTTS-TTCEEEECSS
T ss_pred CCCeEEEECcCHHHH-----HHHHHHHHC-CCeEEEEeCC
Confidence 356899999888884 688999765 9999988543
No 175
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=23.05 E-value=59 Score=29.97 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
|+|+++..++.|- .+|..|+++ ||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~-g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRS-GEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHT-SCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHC-CCeEEEEEcC
Confidence 5799999999884 568889776 9999998754
No 176
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=23.04 E-value=82 Score=28.95 Aligned_cols=27 Identities=11% Similarity=-0.006 Sum_probs=23.0
Q ss_pred ccccccCchhHHHHHh------hCCceeccccc
Q 011381 372 GFLSHCGWNSILESIV------HGVPIIAWPLY 398 (487)
Q Consensus 372 ~~I~HgG~gt~~eal~------~GvP~v~~P~~ 398 (487)
++|.-||=||+.|++. .++|+-++|..
T Consensus 66 ~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 66 LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 8889999999999864 57899999974
No 177
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=22.87 E-value=67 Score=29.60 Aligned_cols=131 Identities=15% Similarity=0.054 Sum_probs=73.4
Q ss_pred CeEEEEEeCCC---cCCCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCcee
Q 011381 279 ESVLFVCFGSG---GTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~---~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~ 355 (487)
++.|.+.-|+. ...+.+.+.++++.|.+.+.++++..+.... ..+.+.+.... +++.+
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e-----------------~~~~~~i~~~~--~~~~l 238 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHE-----------------EERAKRLAEGF--AYVEV 238 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHH-----------------HHHHHHHHTTC--TTEEE
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHH-----------------HHHHHHHHhhC--Ccccc
Confidence 45777777774 4456777888888776667776654343211 00001111111 12323
Q ss_pred ccCCC---cccccccCcccccccccCchhHHHHHhhCCceecc--cccccchhhhHhhhccccee-EEEe-----ecCCC
Q 011381 356 PSWAP---QAQVLSHGSTGGFLSHCGWNSILESIVHGVPIIAW--PLYSEQKMNAVLLTDDLKVS-FRVK-----VNENG 424 (487)
Q Consensus 356 ~~~~p---q~~iL~~~~~~~~I~HgG~gt~~eal~~GvP~v~~--P~~~DQ~~na~~v~~~~G~G-~~l~-----~~~~~ 424 (487)
.+-.+ -.+++++++ ++|+.- .|+++=|.+.|+|+|++ |..... ++ - +|-. ..+. .++
T Consensus 239 ~g~~sl~el~ali~~a~--l~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~--~~----P-~~~~~~~~~~~~~cm~~-- 306 (326)
T 2gt1_A 239 LPKMSLEGVARVLAGAK--FVVSVD-TGLSHLTAALDRPNITVYGPTDPGL--IG----G-YGKNQMVCRAPGNELSQ-- 306 (326)
T ss_dssp CCCCCHHHHHHHHHTCS--EEEEES-SHHHHHHHHTTCCEEEEESSSCHHH--HC----C-CSSSEEEEECGGGCGGG--
T ss_pred cCCCCHHHHHHHHHhCC--EEEecC-CcHHHHHHHcCCCEEEEECCCChhh--cC----C-CCCCceEecCCcccccC--
Confidence 22221 256889999 999972 24555577799999988 432111 11 1 1111 1111 223
Q ss_pred ccCHHHHHHHHHHhccC
Q 011381 425 LVGREDIANYAKGLIQG 441 (487)
Q Consensus 425 ~~~~~~l~~av~~vl~~ 441 (487)
+++|++.++++++|.+
T Consensus 307 -I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 307 -LTANAVKQFIEENAEK 322 (326)
T ss_dssp -CCHHHHHHHHHHTTTT
T ss_pred -CCHHHHHHHHHHHHHH
Confidence 7999999999999975
No 178
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=22.83 E-value=85 Score=29.40 Aligned_cols=73 Identities=7% Similarity=0.027 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccccccCCCCCCCCCchhHHHhhcCCCceeccCCCcccccccCccc
Q 011381 292 LSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWAPQAQVLSHGSTG 371 (487)
Q Consensus 292 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~~pq~~iL~~~~~~ 371 (487)
.+.+..+.+.+++..-..+.||.+..+.. -.++.++++...+-++++
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-------------------------------~~rlL~~lD~~~i~~~PK-- 108 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYN-------------------------------SNGLLKYLDYDLIRENPK-- 108 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-------------------------------GGGGGGGCCHHHHHTSCC--
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc-------------------------------HHHHHhhcChhHHHhCCe--
Confidence 35667888999998888888988777543 133445555555555666
Q ss_pred ccccccCchhHHHHHh--hCCceecccc
Q 011381 372 GFLSHCGWNSILESIV--HGVPIIAWPL 397 (487)
Q Consensus 372 ~~I~HgG~gt~~eal~--~GvP~v~~P~ 397 (487)
.||=..-...++.+++ .|++.+-=|+
T Consensus 109 ~~~GySDiTaL~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 109 FFCGYSDITALNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp EEEECGGGHHHHHHHHHHHCBCEEECCC
T ss_pred EEEEecchHHHHHHHHHhhCCcEEEccc
Confidence 7777666666666666 3666554444
No 179
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=22.71 E-value=56 Score=29.82 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEec
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIP 48 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~ 48 (487)
+|+|+++..+..|. .+|..|+++ ||+|+++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~-g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQG-GNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhC-CCcEEEEEC
Confidence 47899998777774 578889775 999998864
No 180
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=22.68 E-value=66 Score=26.16 Aligned_cols=38 Identities=18% Similarity=0.175 Sum_probs=27.3
Q ss_pred CcEEEEEcC-C-CccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 11 RAYVAMVPT-P-GIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~il~~~~-~-~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
.|+++++-. | ..-.+.-.+-|+..|..+ ||+|++++++
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~-G~~v~VA~np 45 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKK-GFRVTVTANP 45 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHT-TCEEEEEECH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhc-CCeeEEecCH
Confidence 456655433 3 455566678899999765 9999999987
No 181
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=22.38 E-value=58 Score=30.18 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEE
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIF 46 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~ 46 (487)
.+++|+++..++.| ..+|..|+++ ||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~-G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARA-GHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHT-TCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHC-CCeEEEE
Confidence 36799999988888 4678889776 9999998
No 182
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=22.34 E-value=58 Score=31.15 Aligned_cols=35 Identities=9% Similarity=-0.034 Sum_probs=25.1
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEe
Q 011381 7 KQIPRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFI 47 (487)
Q Consensus 7 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~ 47 (487)
+..++++|+++--+-.| +.+|..|+++ |++|+++=
T Consensus 19 ~~~~~~dV~IVGaG~aG-----l~~A~~La~~-G~~V~v~E 53 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGG-----LSAAVALKQS-GIDCDVYE 53 (407)
T ss_dssp ----CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEE
T ss_pred cCCCCCEEEEECCCHHH-----HHHHHHHHhC-CCCEEEEe
Confidence 44456899999866544 7889999765 99999884
No 183
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=22.00 E-value=88 Score=28.37 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEec
Q 011381 10 PRAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIP 48 (487)
Q Consensus 10 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~ 48 (487)
++|+|+|+-.+..|. .+++.|++. ||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~-g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKE-GVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHC-CCeEEEEeC
Confidence 467999998877775 467888665 999987643
No 184
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=21.76 E-value=2e+02 Score=22.25 Aligned_cols=29 Identities=21% Similarity=0.143 Sum_probs=19.6
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHHc
Q 011381 279 ESVLFVCFGSGGTLSQEQLNELALGLEMS 307 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~ 307 (487)
..+|+++.||........+..+.+.+++.
T Consensus 4 ~alllv~HGS~~~~~~~~~~~la~~l~~~ 32 (133)
T 2xws_A 4 RGLVIVGHGSQLNHYREVMELHRKRIEES 32 (133)
T ss_dssp EEEEEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHhh
Confidence 45999999995322334567777777654
No 185
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.74 E-value=63 Score=22.88 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=32.1
Q ss_pred hhCCceecccccccchhh-hHhh--hcccceeEEEeecCCCccCHHHHHHHHHHhcc
Q 011381 387 VHGVPIIAWPLYSEQKMN-AVLL--TDDLKVSFRVKVNENGLVGREDIANYAKGLIQ 440 (487)
Q Consensus 387 ~~GvP~v~~P~~~DQ~~n-a~~v--~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~ 440 (487)
-+|+|++++--.+.|.+. -..- .+ -|+..-+-+. ..+|++.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakk-egvsydvlks----tdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKK-EGVSYDVLKS----TDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHH-HTCEEEEEEC----CCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHh-cCcchhhhcc----CCHHHHHHHHHHHHH
Confidence 378898888777766543 2222 23 4555555554 479999999988774
No 186
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=21.23 E-value=64 Score=29.03 Aligned_cols=32 Identities=13% Similarity=0.166 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 12 AYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 12 ~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
|+|+++..+..|. .+|..|+++ ||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~-g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQ-GHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhC-CCCEEEEEcC
Confidence 5788888777773 678899775 9999988644
No 187
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=20.62 E-value=56 Score=25.73 Aligned_cols=33 Identities=15% Similarity=0.039 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
.++|+++..+.. -..+++.|.++ ||+|+++-..
T Consensus 6 ~~~v~I~G~G~i-----G~~la~~L~~~-g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAA-----GVGLVRELTAA-GKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHH-----HHHHHHHHHHT-TCCEEEEESC
T ss_pred CCEEEEECCCHH-----HHHHHHHHHHC-CCeEEEEECC
Confidence 357888875333 36789999765 9999988654
No 188
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=20.48 E-value=1e+02 Score=26.30 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=22.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHH-hcCCCEEEEEec
Q 011381 11 RAYVAMVPTPGIGHLIPLVELAKRLV-HQYNFLVTIFIP 48 (487)
Q Consensus 11 ~~~il~~~~~~~GH~~p~l~La~~L~-~~~GH~Vt~~~~ 48 (487)
.|+.++++ ++.|.+ -.+++++|+ ++ ||+|+.+.-
T Consensus 4 mmk~vlVt-Gasg~i--G~~~~~~l~~~~-g~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITIL-GAAGQI--AQXLTATLLTYT-DMHITLYGR 38 (221)
T ss_dssp SCSEEEEE-STTSHH--HHHHHHHHHHHC-CCEEEEEES
T ss_pred eEEEEEEE-eCCcHH--HHHHHHHHHhcC-CceEEEEec
Confidence 45544444 445544 367889997 55 999988763
No 189
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=20.33 E-value=77 Score=26.75 Aligned_cols=37 Identities=14% Similarity=0.111 Sum_probs=29.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecCCC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPTID 51 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~~~ 51 (487)
||++.-.++.|=+ =...|.+.|.++ |++|.++.++.-
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~A 40 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQH-FDEVNILFSPSS 40 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTT-SSCEEEEECGGG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEchhH
Confidence 6777777777666 678999999654 999999998754
No 190
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=20.28 E-value=2.1e+02 Score=25.30 Aligned_cols=33 Identities=15% Similarity=-0.083 Sum_probs=22.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCEEEEEecC
Q 011381 13 YVAMVPTPGIGHLIPLVELAKRLVHQYNFLVTIFIPT 49 (487)
Q Consensus 13 ~il~~~~~~~GH~~p~l~La~~L~~~~GH~Vt~~~~~ 49 (487)
++++++ ++.|-+ -.+++++|+++ |++|.++...
T Consensus 6 k~vlVT-Gas~gI--G~~~a~~l~~~-G~~V~~~~r~ 38 (281)
T 3m1a_A 6 KVWLVT-GASSGF--GRAIAEAAVAA-GDTVIGTARR 38 (281)
T ss_dssp CEEEET-TTTSHH--HHHHHHHHHHT-TCEEEEEESS
T ss_pred cEEEEE-CCCChH--HHHHHHHHHHC-CCEEEEEeCC
Confidence 566776 444444 35788999876 9999877644
No 191
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=20.26 E-value=29 Score=18.42 Aligned_cols=17 Identities=24% Similarity=0.653 Sum_probs=13.5
Q ss_pred CchhHHHHHhhCCceec
Q 011381 378 GWNSILESIVHGVPIIA 394 (487)
Q Consensus 378 G~gt~~eal~~GvP~v~ 394 (487)
|.|+++..|..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888654
Done!