Your job contains 1 sequence.
>011382
MSLDDVDSQQQLSGATNYETAGEEGWYILDENQQHVGPYAISELCEHFLNGYLLETTLVW
SQGRSEWQPLSSIPQFLSGISQQVARGSTAVPCNDGIEEVREQIEEAAGMQSQSFSSAEQ
GVPSHVDDEFEKWQREVREAEIEAERLKNGSASDSVGGYMGRDDHDGVPASPEGEDEFTD
DDGTRYKWDRGLRAWVPQEDTSSQNDGYGIEEMTFLKEEEVFPTVNVTDDLANDEVGKEK
LNSTEEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKVNTHVYVTGLPDDV
TVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDG
TPFRPDGKIPMSVTQAKFEQKGERFIAKQVDSKKKKKLKKVEEKMLGWGGRDDAKLTIPA
TVILRFMFTPAEMRADENLRSELEADVQEECVKIGPVDSVKVMKLNVEINCILIIFLLEF
MGLPQVI
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011382
(487 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2181452 - symbol:ELF9 "EARLY FLOWERING 9" spec... 1162 5.4e-118 1
ZFIN|ZDB-GENE-040426-1578 - symbol:htatsf1 "HIV TAT speci... 339 8.8e-31 1
UNIPROTKB|F1P1G7 - symbol:HTATSF1 "Uncharacterized protei... 322 3.0e-28 1
UNIPROTKB|E2R8T8 - symbol:HTATSF1 "Uncharacterized protei... 289 1.1e-22 1
UNIPROTKB|J9NZQ1 - symbol:HTATSF1 "Uncharacterized protei... 289 1.2e-22 1
ASPGD|ASPL0000056254 - symbol:AN1188 species:162425 "Emer... 277 1.5e-22 1
UNIPROTKB|G4MSB8 - symbol:MGG_04442 "Splicing factor U2AF... 210 2.2e-22 3
UNIPROTKB|I3LC46 - symbol:HTATSF1 "Uncharacterized protei... 286 2.6e-22 1
UNIPROTKB|O43719 - symbol:HTATSF1 "HIV Tat-specific facto... 284 4.3e-22 1
POMBASE|SPBC1289.02c - symbol:uap2 "U2 snRNP-associated p... 267 5.0e-22 1
FB|FBgn0037081 - symbol:barc "barricade" species:7227 "Dr... 261 8.1e-22 2
MGI|MGI:1919709 - symbol:Htatsf1 "HIV TAT specific factor... 281 9.7e-22 1
WB|WBGene00022025 - symbol:Y65B4A.1 species:6239 "Caenorh... 271 2.6e-21 1
UNIPROTKB|G3N370 - symbol:HTATSF1 "Uncharacterized protei... 271 5.7e-21 2
UNIPROTKB|Q5H918 - symbol:HTATSF1 "HIV Tat-specific facto... 249 1.0e-20 1
UNIPROTKB|Q5H919 - symbol:HTATSF1 "HIV Tat-specific facto... 248 1.3e-20 1
RGD|1563377 - symbol:Htatsf1 "HIV-1 Tat specific factor 1... 269 2.4e-20 1
CGD|CAL0001495 - symbol:orf19.5767 species:5476 "Candida ... 172 2.5e-14 2
UNIPROTKB|Q5A8Q7 - symbol:CUS2 "Potential spliceosome fac... 172 2.5e-14 2
SGD|S000005230 - symbol:CUS2 "Protein that binds to U2 sn... 194 2.5e-13 1
UNIPROTKB|H7BY36 - symbol:EWSR1 "RNA-binding protein EWS"... 193 6.8e-13 1
UNIPROTKB|F1NCS2 - symbol:EWSR1 "Uncharacterized protein"... 200 9.8e-13 1
UNIPROTKB|F1NDA5 - symbol:EWSR1 "Uncharacterized protein"... 200 1.1e-12 1
RGD|1307258 - symbol:Ewsr1 "Ewing sarcoma breakpoint regi... 192 1.1e-12 1
UNIPROTKB|J9P7G2 - symbol:EWSR1 "Uncharacterized protein"... 199 1.2e-12 1
DICTYBASE|DDB_G0289547 - symbol:DDB_G0289547 "RNA-binding... 191 3.1e-12 1
UNIPROTKB|E2RA07 - symbol:EWSR1 "Uncharacterized protein"... 195 3.6e-12 1
UNIPROTKB|F1RFI8 - symbol:EWSR1 "Uncharacterized protein"... 194 3.9e-12 1
UNIPROTKB|C9JGE3 - symbol:EWSR1 "Ewing sarcoma breakpoint... 193 4.7e-12 1
UNIPROTKB|Q01844 - symbol:EWSR1 "RNA-binding protein EWS"... 193 5.8e-12 1
UNIPROTKB|D4A458 - symbol:Ewsr1 "Protein Ewsr1" species:1... 192 6.8e-12 1
UNIPROTKB|E2RA46 - symbol:EWSR1 "Uncharacterized protein"... 192 6.8e-12 1
UNIPROTKB|A8E651 - symbol:EWSR1 "Uncharacterized protein"... 192 7.5e-12 1
MGI|MGI:99960 - symbol:Ewsr1 "Ewing sarcoma breakpoint re... 192 7.5e-12 1
UNIPROTKB|F1LN98 - symbol:Ewsr1 "Protein Ewsr1" species:1... 192 7.5e-12 1
UNIPROTKB|F1MA60 - symbol:Ewsr1 "Protein Ewsr1" species:1... 192 7.6e-12 1
UNIPROTKB|B0QYK0 - symbol:EWSR1 "RNA-binding protein EWS"... 191 8.8e-12 1
UNIPROTKB|J9P1K6 - symbol:J9P1K6 "Uncharacterized protein... 190 1.0e-11 1
UNIPROTKB|E2RS29 - symbol:E2RS29 "Uncharacterized protein... 180 1.1e-10 1
ZFIN|ZDB-GENE-030131-2317 - symbol:ewsr1a "Ewing sarcoma ... 174 6.7e-10 1
UNIPROTKB|E2R9Z1 - symbol:E2R9Z1 "Uncharacterized protein... 171 1.2e-09 1
ZFIN|ZDB-GENE-061215-102 - symbol:zgc:158363 "zgc:158363"... 170 1.4e-09 2
WB|WBGene00016173 - symbol:fust-1 species:6239 "Caenorhab... 166 2.8e-09 1
UNIPROTKB|E1BT66 - symbol:TAF15 "Uncharacterized protein"... 163 6.0e-09 1
UNIPROTKB|P35637 - symbol:FUS "RNA-binding protein FUS" s... 165 6.5e-09 2
UNIPROTKB|H3BPE7 - symbol:FUS "RNA-binding protein FUS" s... 165 6.5e-09 2
ZFIN|ZDB-GENE-040426-1010 - symbol:fus "fusion (involved ... 164 6.7e-09 1
UNIPROTKB|G8ENL4 - symbol:FUS "Uncharacterized protein" s... 165 1.2e-08 2
MGI|MGI:1353633 - symbol:Fus "fused in sarcoma" species:1... 165 1.3e-08 2
RGD|1308864 - symbol:Fus "fused in sarcoma" species:10116... 165 1.3e-08 2
RGD|1566093 - symbol:RGD1566093 "similar to Fusion (invol... 160 1.4e-08 1
UNIPROTKB|Q28009 - symbol:FUS "RNA-binding protein FUS" s... 165 1.5e-08 2
UNIPROTKB|F1PBJ4 - symbol:FUS "Uncharacterized protein" s... 159 2.2e-08 1
UNIPROTKB|F1S187 - symbol:LOC100518332 "Uncharacterized p... 155 3.9e-08 1
UNIPROTKB|K7EPT6 - symbol:TAF15 "TATA-binding protein-ass... 155 4.7e-08 1
UNIPROTKB|E1BGX1 - symbol:E1BGX1 "Uncharacterized protein... 155 5.2e-08 1
RGD|1309595 - symbol:Taf15 "TAF15 RNA polymerase II, TATA... 155 6.8e-08 1
UNIPROTKB|D3ZZM1 - symbol:Taf15 "Protein Taf15" species:1... 155 6.9e-08 1
UNIPROTKB|F1PB61 - symbol:TAF15 "Uncharacterized protein"... 155 7.2e-08 1
ZFIN|ZDB-GENE-030131-1600 - symbol:ewsr1b "Ewing sarcoma ... 153 7.4e-08 2
UNIPROTKB|Q92804 - symbol:TAF15 "TATA-binding protein-ass... 155 7.6e-08 1
UNIPROTKB|F1LWL0 - symbol:F1LWL0 "Uncharacterized protein... 152 9.9e-08 1
FB|FBgn0011571 - symbol:caz "cabeza" species:7227 "Drosop... 144 6.3e-07 1
FB|FBgn0037939 - symbol:CG14718 species:7227 "Drosophila ... 140 2.2e-06 1
TAIR|locus:2011967 - symbol:TAF15 "TBP-associated factor ... 129 2.6e-05 1
TAIR|locus:2083248 - symbol:AT3G52660 species:3702 "Arabi... 128 7.3e-05 2
>TAIR|locus:2181452 [details] [associations]
symbol:ELF9 "EARLY FLOWERING 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] InterPro:IPR000504 InterPro:IPR003169
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005829 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0000184 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0009910 SUPFAM:SSF55277 HSSP:Q01081 EMBL:AL391148
eggNOG:NOG317500 KO:K13093 InterPro:IPR025640 Pfam:PF14237
OMA:AAYQANY EMBL:BT022024 EMBL:AK229192 IPI:IPI00529602 PIR:T51496
RefSeq:NP_197130.1 UniGene:At.10000 ProteinModelPortal:Q9LF02
SMR:Q9LF02 PaxDb:Q9LF02 PRIDE:Q9LF02 EnsemblPlants:AT5G16260.1
GeneID:831486 KEGG:ath:AT5G16260 TAIR:At5g16260
HOGENOM:HOG000240892 InParanoid:Q9LF02 PhylomeDB:Q9LF02
ProtClustDB:CLSN2916222 Genevestigator:Q9LF02 Uniprot:Q9LF02
Length = 519
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 238/477 (49%), Positives = 306/477 (64%)
Query: 3 LDDVDSQQQLSGATNYETAGEE-GWYILDENQQHVGPYAISELCEHFLNGYLLETTLVWS 61
+ D D+ Q +T A + GWYIL ENQQ++GPY SELC HF NGYLLETTLVW+
Sbjct: 1 MSDSDNLQLPPSSTGATVAATDVGWYILGENQQNLGPYTFSELCNHFRNGYLLETTLVWA 60
Query: 62 QGRSEWQPLSSIPQFLSGISQQVARGSTAVPCNDGIEEVREQIEEAAGMQSQSFSSAEQG 121
GRSEWQPLS+IP +S IS A P G + + Q ++++
Sbjct: 61 DGRSEWQPLSAIPDLMSRISG----AEIAYPAV-GSSGLINGSNAGTRQEKQDYTAS--- 112
Query: 122 VPSHVDDEFEKWQXXXXXXXXXXXXLKNGSASDSVGGYMGRDDHDGVPASPXXXXXXXXX 181
+ +DEFEKWQ LKNGS S G + DDH+ + P
Sbjct: 113 --ASTEDEFEKWQREIKDAEAEAERLKNGSVS---GTELVEDDHERASSPPEGEDEFTDD 167
Query: 182 XXXRYKWDRGLRAWVPQEDTSSQN-DGYGIEEMTFLKEEEVFPTVNVTD-DLANDEVGKE 239
+YKWDR R WVPQ+D + D YG+EEMTF KE+EVFPT+N+ D + + K+
Sbjct: 168 DGTKYKWDRARRVWVPQDDPPLGSVDPYGLEEMTFAKEDEVFPTINILDTSVDKKDASKD 227
Query: 240 KLNSTEEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKVNTHVYVTGLPDD 299
+ +E+ + +D E NGKRK P+ + EKKE NKPPDSWFELKVN H+YV GLPDD
Sbjct: 228 DVAGKKEE-DGSDETAEINSNGKRKLPEPETEKKEPNKPPDSWFELKVNPHIYVNGLPDD 286
Query: 300 VTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLD 359
VT+EE+ EVFSKCGIIKED +T KPRIK+Y DK TG KGDAL++Y+KEPSV LA ++LD
Sbjct: 287 VTIEEVAEVFSKCGIIKED-DTGKPRIKLYSDKATGKLKGDALISYMKEPSVDLAIKILD 345
Query: 360 GTPFRPDGKIPMSVTQAKFEQKGERFIAKQVDSXXXXXXXXXXXXMLGWGGRDDAKLTIP 419
G P RP K+ MSV++AKFEQKGERFI KQ D+ +LGWGG DD+K++IP
Sbjct: 346 GAPLRPADKLLMSVSRAKFEQKGERFITKQTDNKKKKKLKKVEQKLLGWGGTDDSKVSIP 405
Query: 420 ATVILRFMFTPAEMRADENLRSELEADVQEECVKIGPVDSVKVMKLNVEINCILIIF 476
ATV+LR+MF+PAE+ ADE+L +ELE DV+EE +K GP DSVKV + + + +L+ F
Sbjct: 406 ATVVLRYMFSPAELMADEDLVAELEEDVKEESLKHGPFDSVKVCEHHPQ-GVVLVRF 461
>ZFIN|ZDB-GENE-040426-1578 [details] [associations]
symbol:htatsf1 "HIV TAT specific factor 1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-1578 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG317500 KO:K13093
CTD:27336 HOVERGEN:HBG059454 OrthoDB:EOG4BRWKT EMBL:BC055565
IPI:IPI00510206 RefSeq:NP_957497.1 UniGene:Dr.77530
ProteinModelPortal:Q7SXJ9 SMR:Q7SXJ9 STRING:Q7SXJ9 PRIDE:Q7SXJ9
GeneID:394178 KEGG:dre:394178 HOGENOM:HOG000067967
InParanoid:Q7SXJ9 NextBio:20815121 ArrayExpress:Q7SXJ9 Bgee:Q7SXJ9
Uniprot:Q7SXJ9
Length = 450
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 99/282 (35%), Positives = 144/282 (51%)
Query: 186 YKWDRGLRAWVPQEDTSSQNDGYGIEEMTFLKEEEVFPTVNVTDDLANDEVGK-EKLNST 244
Y WD RAW P+ + +D + + EE P + + A K E+
Sbjct: 43 YDWDHEKRAWFPKIN----DDFIAAYQANYGFNEEGAPDPSAAVNSAESLPAKSEEPKKP 98
Query: 245 EEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKV--NTHVYVTGLPDDVTV 302
EE A E GK K+ +K+ EK++A+ P +WFE++ NT+V+VTGLP D+T
Sbjct: 99 EEPTKPA----EASDQGKNKEGEKKGEKRKAD--P-TWFEVEKEKNTNVHVTGLPPDITP 151
Query: 303 EEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTP 362
+E V V SKCGI+ DP T++ +I+IY DK+ G +KGD L YLK+ SVALA QLLD T
Sbjct: 152 DEFVGVMSKCGIVMRDPITEEYKIRIYKDKD-GNQKGDGLCCYLKKESVALAKQLLDETE 210
Query: 363 FRPDGKIPMSVTQAKFEQKGERFIA--KQVDSXXXXXXXXXXXXMLGWGGRDDAKLTI-- 418
R G + V +A+FE KG+ F A K+ + L W ++
Sbjct: 211 IR--G-YRLHVEEARFELKGQ-FDASKKKKKNKEYRKKLQQQQKQLDWRPEKSGEVRKRH 266
Query: 419 PATVILRFMFTPAEMRADENLRSELEADVQEECVKIGPVDSV 460
+I++ MF P + D + +E D++ EC K G V V
Sbjct: 267 EKVIIIQNMFHPTDFEEDPLVLNEYRDDLRTECEKFGQVKKV 308
>UNIPROTKB|F1P1G7 [details] [associations]
symbol:HTATSF1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000009902 KO:K13093 CTD:27336 OMA:AAYQANY
EMBL:AADN02013314 IPI:IPI00582585 RefSeq:XP_001233032.1
UniGene:Gga.15900 ProteinModelPortal:F1P1G7
Ensembl:ENSGALT00000010348 GeneID:422245 KEGG:gga:422245
NextBio:20824907 Uniprot:F1P1G7
Length = 450
Score = 322 (118.4 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 98/286 (34%), Positives = 142/286 (49%)
Query: 186 YKWDRGLRAWVPQ--ED-TSSQNDGYGIEEMTFLKEEEVFPTVNVTDDLANDEVGKEKLN 242
Y+WDR +AW P+ ED ++ + YG F +E TD + E
Sbjct: 44 YEWDREKKAWFPKITEDFLATYHANYG-----FNADE--------TDSSSASGTASENKL 90
Query: 243 STEEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKV--NTHVYVTGLPDDV 300
K + EK K+ +P ++ EK++ +P WF ++ NT+VYVTGLP D+
Sbjct: 91 PLSSKTSETQPSANEK-GPKQTEPKQKTEKRKL-EP--GWFHVEEDRNTNVYVTGLPPDI 146
Query: 301 TVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDG 360
T +E V+V SK GII DP+T++ +IK+Y DKE G KGD L YLK SV LA +LLD
Sbjct: 147 TKDEFVQVMSKGGIIMRDPQTEEHKIKLYKDKE-GNLKGDGLCCYLKRESVQLALRLLDE 205
Query: 361 TPFRPDGKIPMSVTQAKFEQKGERFIAKQVDS-XXXXXXXXXXXXMLGWGG-RDD--AKL 416
R K+ + V AKF+ KGE +K+ L W + D A++
Sbjct: 206 AEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSQQQKQLDWRPEKKDGAARM 262
Query: 417 TIPATVILRFMFTPAEMRADENLRSELEADVQEECVKIGPVDSVKV 462
VI+R MF P + D + +E+ D++ EC K G V V +
Sbjct: 263 RHERIVIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLI 308
>UNIPROTKB|E2R8T8 [details] [associations]
symbol:HTATSF1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000009902 EMBL:AAEX03026952
Ensembl:ENSCAFT00000035753 NextBio:20855936 Uniprot:E2R8T8
Length = 750
Score = 289 (106.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 86/277 (31%), Positives = 135/277 (48%)
Query: 198 QEDTSSQNDGYGIE--EMTF---LKEEEVFPTVNVTDDL-----ANDEVGKEKLNSTEEK 247
Q+D S + D +G + + + L ++ FP +T+D AN E +S+
Sbjct: 31 QKDPSGEPDSFGQQPADTPYEWDLDKKAWFP--KITEDFIATYQANYGFSNEGASSSTAN 88
Query: 248 VNSAD-NVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKV--NTHVYVTGLPDDVTVEE 304
V EE K +P+ ++ E K WF ++ NT+VYV+GLP D+TV+E
Sbjct: 89 VQEVSARTAEEPPQRKTPEPNDPKKRGEKRKAEPGWFHVEEDRNTNVYVSGLPPDITVDE 148
Query: 305 MVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFR 364
+++ SK GII DP+T++ ++K+Y D + G KGD L YLK SV LA +LLD R
Sbjct: 149 FIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GNLKGDGLCCYLKRESVDLALKLLDEDEIR 207
Query: 365 PDGKIPMSVTQAKFEQKGERFIAKQVDS-XXXXXXXXXXXXMLGWGGRDDA---KLTIPA 420
K+ + V AKF+ KGE +K+ L W A ++
Sbjct: 208 -GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSLQQKQLDWRPERRAGPSRMRHER 264
Query: 421 TVILRFMFTPAEMRADENLRSELEADVQEECVKIGPV 457
VI++ MF P + D + +E+ D++ EC K G +
Sbjct: 265 VVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQI 301
>UNIPROTKB|J9NZQ1 [details] [associations]
symbol:HTATSF1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000009902 KO:K13093 CTD:27336 OMA:MQELYGD
EMBL:AAEX03026952 RefSeq:XP_538183.3 Ensembl:ENSCAFT00000048239
GeneID:481062 KEGG:cfa:481062 Uniprot:J9NZQ1
Length = 768
Score = 289 (106.8 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 86/277 (31%), Positives = 135/277 (48%)
Query: 198 QEDTSSQNDGYGIE--EMTF---LKEEEVFPTVNVTDDL-----ANDEVGKEKLNSTEEK 247
Q+D S + D +G + + + L ++ FP +T+D AN E +S+
Sbjct: 31 QKDPSGEPDSFGQQPADTPYEWDLDKKAWFP--KITEDFIATYQANYGFSNEGASSSTAN 88
Query: 248 VNSAD-NVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKV--NTHVYVTGLPDDVTVEE 304
V EE K +P+ ++ E K WF ++ NT+VYV+GLP D+TV+E
Sbjct: 89 VQEVSARTAEEPPQRKTPEPNDPKKRGEKRKAEPGWFHVEEDRNTNVYVSGLPPDITVDE 148
Query: 305 MVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFR 364
+++ SK GII DP+T++ ++K+Y D + G KGD L YLK SV LA +LLD R
Sbjct: 149 FIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GNLKGDGLCCYLKRESVDLALKLLDEDEIR 207
Query: 365 PDGKIPMSVTQAKFEQKGERFIAKQVDS-XXXXXXXXXXXXMLGWGGRDDA---KLTIPA 420
K+ + V AKF+ KGE +K+ L W A ++
Sbjct: 208 -GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSLQQKQLDWRPERRAGPSRMRHER 264
Query: 421 TVILRFMFTPAEMRADENLRSELEADVQEECVKIGPV 457
VI++ MF P + D + +E+ D++ EC K G +
Sbjct: 265 VVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQI 301
>ASPGD|ASPL0000056254 [details] [associations]
symbol:AN1188 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005686 "U2 snRNP" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 EMBL:BN001308 Gene3D:3.30.70.330
GO:GO:0003676 ProteinModelPortal:C8VT05
EnsemblFungi:CADANIAT00001437 OMA:VILKHMF Uniprot:C8VT05
Length = 396
Score = 277 (102.6 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 86/268 (32%), Positives = 130/268 (48%)
Query: 205 NDGYGIEEMTFLKEEEVFPTVNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNGKRK 264
+DG T LK PT++ DDL + K+ +E + +++K RK
Sbjct: 49 DDGQEYSYDTILKRW--IPTID--DDLLRQQQEAYKVEGVDEDEQAGAQRLKKK----RK 100
Query: 265 QPDKQVEKKEANKPPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKP 324
Q E+ +A KP +VNT V+VT +P D +E+ ++FS+CG+I E+ ++ +P
Sbjct: 101 QGS---EEGDAQKPKKQ----RVNTAVFVTSIPLDAEFDEIRDIFSRCGVIAEEIDSGRP 153
Query: 325 RIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFR---PDGKIPMSVTQAKFEQK 381
RIK+Y D E G KG+ALV Y + SV LA Q+LD + FR P + PM V A F K
Sbjct: 154 RIKMYTDDE-GKFKGEALVVYFRPESVNLAIQMLDDSDFRLGVPGPQGPMRVQPADFSFK 212
Query: 382 GERFIAKQV---DSXXXXXXXXXXXXMLG-WGGRDDAKLT-----IPATVILRFMFTPAE 432
++ + D L W + A L VIL+ MFT E
Sbjct: 213 SQQEAPTKTSMRDKKKIIKRTQKLNNKLADWDDDEPAALVDTNSKFEKIVILKHMFTLQE 272
Query: 433 MRADENLRSELEADVQEECVKIGPVDSV 460
+ D +++ D++EEC K+G V +V
Sbjct: 273 LEEDPAAILDIKEDIREECSKLGEVTNV 300
>UNIPROTKB|G4MSB8 [details] [associations]
symbol:MGG_04442 "Splicing factor U2AF-associated protein
2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CM001232 KO:K13093 RefSeq:XP_003713537.1
ProteinModelPortal:G4MSB8 EnsemblFungi:MGG_04442T0 GeneID:2677962
KEGG:mgr:MGG_04442 Uniprot:G4MSB8
Length = 410
Score = 210 (79.0 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 51/105 (48%), Positives = 66/105 (62%)
Query: 267 DKQVEKKEANKPPDSWFEL-KVNTHVYVTGLPDDVTVEEMVEVFS-KCGIIKEDPETKKP 324
D++ +K++A + + NT VYVTGLP DVTVEE+ E+FS KCG+I E+ + P
Sbjct: 95 DRRKKKRKAGDDDGGKAKRPRQNTAVYVTGLPLDVTVEEIAELFSRKCGVIAENIDDSSP 154
Query: 325 RIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFR--PDG 367
RIK+Y D G KGDALV + K SV +A LLD T FR P G
Sbjct: 155 RIKLYTDGG-GNFKGDALVVFFKPQSVDMAIMLLDDTDFRITPSG 198
Score = 94 (38.1 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 27/92 (29%), Positives = 41/92 (44%)
Query: 375 QAKFEQKGERFIAKQVDSXXXXXXXXXXXXM-LGWGGRDDAKLTIPATVILRFMFTPAEM 433
+AK +K ++ AK D + G GG TVILR MFT E+
Sbjct: 260 KAKVIKKAQKMSAKLADWDDDDPYPYLAAAVGAGAGGNGPTNKKAERTVILRHMFTLKEL 319
Query: 434 RADENLRSELEADVQEECVKIGPVDSVKVMKL 465
D E++ D+++EC K+G V + + L
Sbjct: 320 DEDPAALLEIKEDIRDECEKLGEVTNCVLFDL 351
Score = 58 (25.5 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 186 YKWDRGLRAWVPQEDTS---SQNDGYG 209
Y+WD GL+ W+P D + S YG
Sbjct: 53 YEWDGGLKRWIPIVDDALIESHQAAYG 79
>UNIPROTKB|I3LC46 [details] [associations]
symbol:HTATSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00390000009902
KO:K13093 OMA:MQELYGD EMBL:FP340295 RefSeq:XP_003360505.1
Ensembl:ENSSSCT00000022638 GeneID:100622043 KEGG:ssc:100622043
Uniprot:I3LC46
Length = 760
Score = 286 (105.7 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 85/277 (30%), Positives = 133/277 (48%)
Query: 198 QEDTSSQNDGYGIE--EMTF---LKEEEVFPTVNVTDDL-----ANDEVGKEKLNSTEEK 247
Q+D + D +G + + + L ++ FP +T+D AN + +S+
Sbjct: 31 QKDPGGETDSFGQQPADTPYEWDLDKKAWFP--KITEDFIATYQANYGFSNDGASSSAAS 88
Query: 248 VNSAD-NVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKV--NTHVYVTGLPDDVTVEE 304
V EE K +P +K E K WF ++ NT+VYV+GLP D+TV+E
Sbjct: 89 VQDVSARTTEEPPQRKTPEPSDPRKKGEKRKAESGWFHVEEDRNTNVYVSGLPPDITVDE 148
Query: 305 MVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFR 364
+++ SK GII DP+T++ ++K+Y D + G KGD L YLK SV LA +LLD R
Sbjct: 149 FIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GNLKGDGLCCYLKRESVDLALKLLDEDEIR 207
Query: 365 PDGKIPMSVTQAKFEQKGERFIAKQVDS-XXXXXXXXXXXXMLGWGGRDDA---KLTIPA 420
K+ + V AKF+ KGE +K+ L W A ++
Sbjct: 208 -GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSMQQKQLDWRPERRAGPSRMRHER 264
Query: 421 TVILRFMFTPAEMRADENLRSELEADVQEECVKIGPV 457
VI++ MF P + D + +E+ D++ EC K G +
Sbjct: 265 VVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQI 301
>UNIPROTKB|O43719 [details] [associations]
symbol:HTATSF1 "HIV Tat-specific factor 1" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032784 "regulation of
DNA-dependent transcription, elongation" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0019079 "viral genome replication" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0006351 GO:GO:0003723
EMBL:CH471150 EMBL:Z97632 GO:GO:0019079 eggNOG:NOG317500 KO:K13093
GO:GO:0032784 EMBL:U76992 EMBL:BT006886 EMBL:AB209303 EMBL:BC009896
IPI:IPI00013788 RefSeq:NP_001156752.1 RefSeq:NP_055315.2
UniGene:Hs.204475 PDB:2DIT PDBsum:2DIT ProteinModelPortal:O43719
SMR:O43719 DIP:DIP-42095N IntAct:O43719 MINT:MINT-1193787
STRING:O43719 PhosphoSite:O43719 PaxDb:O43719 PeptideAtlas:O43719
PRIDE:O43719 DNASU:27336 Ensembl:ENST00000218364
Ensembl:ENST00000535601 GeneID:27336 KEGG:hsa:27336 UCSC:uc004ezw.3
CTD:27336 GeneCards:GC0XP135579 HGNC:HGNC:5276 HPA:HPA000504
MIM:300346 neXtProt:NX_O43719 PharmGKB:PA29540 HOGENOM:HOG000049201
HOVERGEN:HBG059454 InParanoid:O43719 OMA:MQELYGD OrthoDB:EOG4BRWKT
PhylomeDB:O43719 ChiTaRS:HTATSF1 EvolutionaryTrace:O43719
GenomeRNAi:27336 NextBio:50396 PMAP-CutDB:O43719
ArrayExpress:O43719 Bgee:O43719 CleanEx:HS_HTATSF1
Genevestigator:O43719 GermOnline:ENSG00000102241 Uniprot:O43719
Length = 755
Score = 284 (105.0 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 79/245 (32%), Positives = 119/245 (48%)
Query: 219 EEVFPTVNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKP 278
E+ T +ND G + E V++ EE K +P +K E K
Sbjct: 65 EDFIATYQANYGFSND--GASSSTANVEDVHA--RTAEEPPQEKAPEPTDARKKGEKRKA 120
Query: 279 PDSWFELKV--NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGM 336
WF ++ NT+VYV+GLP D+TV+E +++ SK GII DP+T++ ++K+Y D + G
Sbjct: 121 ESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GN 179
Query: 337 KKGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAKFEQKGERFIAKQVDS-XXX 395
KGD L YLK SV LA +LLD R K+ + V AKF+ KGE +K+
Sbjct: 180 LKGDGLCCYLKRESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDY 236
Query: 396 XXXXXXXXXMLGWGGRDDA---KLTIPATVILRFMFTPAEMRADENLRSELEADVQEECV 452
L W A ++ VI++ MF P + D + +E+ D++ EC
Sbjct: 237 KKKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECS 296
Query: 453 KIGPV 457
K G +
Sbjct: 297 KFGQI 301
>POMBASE|SPBC1289.02c [details] [associations]
symbol:uap2 "U2 snRNP-associated protein Uap2"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005681 "spliceosomal complex" evidence=NAS] [GO:0005686 "U2
snRNP" evidence=IPI] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 PomBase:SPBC1289.02c GO:GO:0000166
EMBL:CU329671 Gene3D:3.30.70.330 GenomeReviews:CU329671_GR
GO:GO:0005681 GO:GO:0003723 GO:GO:0005686 GO:GO:0045292
eggNOG:NOG317500 KO:K13093 OMA:HISENED OrthoDB:EOG4JWZQ8
EMBL:U97681 PIR:T39353 RefSeq:NP_596826.1 ProteinModelPortal:O43120
IntAct:O43120 STRING:O43120 EnsemblFungi:SPBC1289.02c.1
GeneID:2539783 KEGG:spo:SPBC1289.02c HOGENOM:HOG000207452
NextBio:20800932 Uniprot:O43120
Length = 367
Score = 267 (99.0 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 80/245 (32%), Positives = 113/245 (46%)
Query: 227 VTDDLANDEVGKEKLNSTEEKVNSA-DNVVEEKH-NGKRKQPDKQVEKKEANKPPDSWFE 284
V+D A GKE N + ++ E + +G R + K E EA+ P
Sbjct: 53 VSDVTAEATEGKESSNGEDRHTKRLYESTSAEGYPSGSRNKKSKS-ENSEASPAP----- 106
Query: 285 LKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVT 344
+N VY+ GLP DVTV+E+ EVF KCG+I ++ + PRIKIY E G KGDAL+
Sbjct: 107 -VINKAVYIQGLPLDVTVDEIEEVFKKCGVIAKNIDNGTPRIKIY-RTEDGTPKGDALIV 164
Query: 345 YLKEPSVALATQLLDGTPFRPDGKIPMSVTQAKFEQKGERFIAKQVDSXXXXXXXXXXXX 404
+ + SV LA QL D T FR M V +A + K E+ + K V
Sbjct: 165 FFRSESVELAEQLFDDTEFRYGSGQKMRVQKANIDYKKEKTVNKDVGGALKKKALRLRQQ 224
Query: 405 ML----GWGGRDDA-----KLTIPATVILRFMFTPAEMRADENLRSELEADVQEECVKIG 455
+ W D+ K V+L+ +FT E+ L +L+ D+ EE K G
Sbjct: 225 QMQQISSWDDVDEEVDDKRKKRFNKIVVLKHIFTLEELDKTPELLIDLKDDITEEAEKCG 284
Query: 456 PVDSV 460
V +V
Sbjct: 285 RVTNV 289
>FB|FBgn0037081 [details] [associations]
symbol:barc "barricade" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 EMBL:AE014296
GO:GO:0030182 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
eggNOG:NOG317500 GeneTree:ENSGT00390000009902 KO:K13093
EMBL:AY061345 RefSeq:NP_649313.1 RefSeq:NP_730628.1
RefSeq:NP_730629.1 UniGene:Dm.1035 SMR:Q7K204 IntAct:Q7K204
STRING:Q7K204 EnsemblMetazoa:FBtr0078399 EnsemblMetazoa:FBtr0078400
GeneID:40369 KEGG:dme:Dmel_CG6049 UCSC:CG6049-RA
FlyBase:FBgn0037081 InParanoid:Q7K204 OMA:MARYQMN OrthoDB:EOG4TB2SG
GenomeRNAi:40369 NextBio:818414 Uniprot:Q7K204
Length = 556
Score = 261 (96.9 bits), Expect = 8.1e-22, Sum P(2) = 8.1e-22
Identities = 83/286 (29%), Positives = 130/286 (45%)
Query: 188 WDRGLRAWVPQEDT---SSQNDGYGIEEMTFLKEEEVFPTVNVTDDLANDEVGKEKLNST 244
WD AW P+ D + YG + T E+E A E + K
Sbjct: 189 WDATKSAWFPKIDDDFMARYQMNYGFIDNTSAGEKEK----------AEKEAAEAKRKEE 238
Query: 245 EEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKV--NTHVYVTGLPDDVTV 302
E K +A+ + K++A +PP WFE+ NT VYV+ LP D+T+
Sbjct: 239 ELKRMTAEAEAAMSRDNPASSAAVPTGKRKAQEPP-KWFEMDPLQNTKVYVSNLPLDITM 297
Query: 303 EEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTP 362
+E ++ KCG++ DP+T+K ++K+Y +K+ G KGD L Y+K SV LA ++LD
Sbjct: 298 DEFADLMGKCGMVMRDPQTQKFKLKLYAEKD-GQIKGDGLCDYIKVESVNLALKILDEYN 356
Query: 363 FRPDGKIPMSVTQAKFEQKGER--FIAKQVDSXXXXXXXXXXXXMLGWGGRDDA----KL 416
R KI V +A+F+ +GE + + + W R D +
Sbjct: 357 LRGH-KI--RVQRAQFQMRGEYNPALKPKRKKKDKEKLQKMKEKLFDW--RPDKLRGERS 411
Query: 417 TIPATVILRFMFTPAEMRADENLRSELEADVQEECVKIGPVDSVKV 462
TVI++ +FTP + L E + +++EEC K G V V +
Sbjct: 412 KNEKTVIIKNLFTPELFEKEVELILEYQNNLREECSKCGMVRKVVI 457
Score = 60 (26.2 bits), Expect = 8.1e-22, Sum P(2) = 8.1e-22
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 186 YKWDRGLRAWVPQEDTSSQNDGYGIEE 212
YKWD + WVP+ Q G++E
Sbjct: 147 YKWDDEQKKWVPKHPNPGQEGVCGVDE 173
Score = 38 (18.4 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 186 YKWDRGLRAWVPQ-EDTSSQN 205
YKW + W+P+ ++T +++
Sbjct: 126 YKWCPKSQQWLPKKQETETEH 146
>MGI|MGI:1919709 [details] [associations]
symbol:Htatsf1 "HIV TAT specific factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1919709 GO:GO:0005634 GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 eggNOG:NOG317500
GeneTree:ENSGT00390000009902 KO:K13093 EMBL:AL672263 CTD:27336
HOGENOM:HOG000049201 HOVERGEN:HBG059454 OrthoDB:EOG4BRWKT
EMBL:AK005527 EMBL:AK011234 EMBL:AK049495 EMBL:BC037711
EMBL:BC114588 EMBL:BC114589 IPI:IPI00221566 IPI:IPI00775823
RefSeq:NP_082518.1 RefSeq:NP_083647.1 UniGene:Mm.2152
ProteinModelPortal:Q8BGC0 SMR:Q8BGC0 DIP:DIP-46367N STRING:Q8BGC0
PhosphoSite:Q8BGC0 PaxDb:Q8BGC0 PRIDE:Q8BGC0
Ensembl:ENSMUST00000088652 Ensembl:ENSMUST00000114751 GeneID:72459
KEGG:mmu:72459 UCSC:uc009tgv.2 InParanoid:Q8BGC0 NextBio:336274
Bgee:Q8BGC0 CleanEx:MM_HTATSF1 Genevestigator:Q8BGC0
GermOnline:ENSMUSG00000067873 Uniprot:Q8BGC0
Length = 757
Score = 281 (104.0 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 84/255 (32%), Positives = 127/255 (49%)
Query: 216 LKEEEVFPTVNVTDDL-----ANDEVGKEKLNSTEEKVNSADNVVEEKHNGKR--KQPDK 268
L ++ FP +T+D AN + +S+ V A+ E+ K + PD
Sbjct: 55 LDKKAWFP--KITEDFIATYQANYGFSSDGASSSTANVQDANTKAVEEPPQKEVPETPDS 112
Query: 269 QVEKKEANKPPDSWFELKV--NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRI 326
+ K E K WF ++ NT+VYV+GLP D+TV+E +++ SK GII DP+T++ ++
Sbjct: 113 K-RKGEKRKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKV 171
Query: 327 KIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAKFEQKGERFI 386
K+Y D + G KGD L YLK+ SV LA +LLD R K+ + V AKF+ KGE
Sbjct: 172 KLYKDDQ-GNLKGDGLCCYLKKESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDA 227
Query: 387 AKQVDS-XXXXXXXXXXXXMLGWGGRDDA---KLTIPATVILRFMFTPAEMRADENLRSE 442
+K+ L W A +L VIL+ MF P + D + +E
Sbjct: 228 SKKKKKCKDYKKKLSLQQKQLDWRPERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNE 287
Query: 443 LEADVQEECVKIGPV 457
+ D++ EC K G +
Sbjct: 288 IREDLRVECSKFGQI 302
>WB|WBGene00022025 [details] [associations]
symbol:Y65B4A.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0010171
GO:GO:0040011 GO:GO:0003676 GO:GO:0042127 GO:GO:0007281
GO:GO:0040020 GO:GO:0040022 eggNOG:NOG317500
GeneTree:ENSGT00390000009902 KO:K13093 EMBL:FO081482
RefSeq:NP_490765.1 ProteinModelPortal:Q9BL57 SMR:Q9BL57
PaxDb:Q9BL57 EnsemblMetazoa:Y65B4A.1 GeneID:171656
KEGG:cel:CELE_Y65B4A.1 UCSC:Y65B4A.1 CTD:171656 WormBase:Y65B4A.1
HOGENOM:HOG000152129 InParanoid:Q9BL57 OMA:AAYQANY NextBio:872173
Uniprot:Q9BL57
Length = 442
Score = 271 (100.5 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 85/284 (29%), Positives = 130/284 (45%)
Query: 186 YKWDRGLRAWVPQEDTSSQNDGYGIEEMTFLKEEEVFPTVNVTDDLANDEVGKEKLNSTE 245
Y WD + WVP+ N+ F+ E + V D++ K+ +
Sbjct: 91 YDWDEEKKEWVPKAKQEEVNED-------FIAEYQANYGVQY------DDIYKKMDEELQ 137
Query: 246 EKVNSADNVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKVNTH-VYVTGLPDDVTVEE 304
EK A EEK KRK K+V + W +L H VYV+ LP+D+T EE
Sbjct: 138 EKAAKAQKEDEEKKEKKRK---KKVGLGAGEDAKEGWLDLGDKVHAVYVSNLPEDITDEE 194
Query: 305 MVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFR 364
+ SKCG+I+ D T KP+ K+Y + E G KGD Y+K+ SV LA +LDG
Sbjct: 195 FQKFMSKCGVIQPDIRTNKPKCKLYRE-ENGKLKGDGRCCYIKKESVELACNILDGANL- 252
Query: 365 PDGKIPMSVTQAKFEQKGERFIAKQ---VDSXXXXXXXXXXXXMLGWGGRDDAKLTIP-- 419
+G+ + V +A+FE KG+ A++ + + + W D + P
Sbjct: 253 -NGR-EVKVEEARFEMKGDFDPARKRRKLTAAQKKRYMEQQNKIFEWTP-DKPRNYRPKS 309
Query: 420 -ATVILRFMFTPAEMRADENLRSELEADVQEECVKIGPVDSVKV 462
TVI++ +FT M + L +L+ ++ + C K G V V V
Sbjct: 310 DCTVIVKNLFTQEMMNKNAALMLDLKEEMTQSCQKYGIVKKVVV 353
>UNIPROTKB|G3N370 [details] [associations]
symbol:HTATSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00390000009902
OMA:MQELYGD EMBL:DAAA02033795 Ensembl:ENSBTAT00000025363
Uniprot:G3N370
Length = 756
Score = 271 (100.5 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 78/245 (31%), Positives = 114/245 (46%)
Query: 219 EEVFPTVNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKP 278
E+ T +ND NST + + EE + P +K E K
Sbjct: 65 EDFIATYQANYGFSNDGAS----NSTASVQDVSARTAEEPPQRQPPDPSDLKKKGEKRKT 120
Query: 279 PDSWFELKV--NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGM 336
WF ++ NT+VYV+GLP D+TV+E +++ SK GII DP+T ++K+Y D + G
Sbjct: 121 ESGWFHVEDDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTGDFKVKLYKDDQ-GN 179
Query: 337 KKGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAKFEQKGERFIAKQVDS-XXX 395
KGD L YLK SV LA +LLD R G + V AKF+ KGE +K+
Sbjct: 180 LKGDGLCCYLKRESVDLALKLLDEGEIR--G-YRLHVEVAKFQLKGEYDASKKKKKCKDY 236
Query: 396 XXXXXXXXXMLGWGGRDDA---KLTIPATVILRFMFTPAEMRADENLRSELEADVQEECV 452
L W A ++ VI++ MF P + D + +E+ D++ EC
Sbjct: 237 KKKLSMQQKQLDWRPERQAGSSRMYHERVVIIKNMFHPVDFEDDPLVLNEIREDLRVECS 296
Query: 453 KIGPV 457
K G +
Sbjct: 297 KFGQI 301
Score = 46 (21.3 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 186 YKWDRGLRAWVPQ--ED-TSSQNDGYG 209
Y+WD +AW P+ ED ++ YG
Sbjct: 50 YEWDLDKKAWFPKITEDFIATYQANYG 76
>UNIPROTKB|Q5H918 [details] [associations]
symbol:HTATSF1 "HIV Tat-specific factor 1" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:Z97632 UniGene:Hs.204475 HGNC:HGNC:5276
HOVERGEN:HBG059454 ChiTaRS:HTATSF1 IPI:IPI00644220 SMR:Q5H918
STRING:Q5H918 Ensembl:ENST00000448450 HOGENOM:HOG000202112
Uniprot:Q5H918
Length = 244
Score = 249 (92.7 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 64/173 (36%), Positives = 93/173 (53%)
Query: 219 EEVFPTVNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKP 278
E+ T +ND G + E V++ EE K +P +K E K
Sbjct: 65 EDFIATYQANYGFSND--GASSSTANVEDVHA--RTAEEPPQEKAPEPTDARKKGEKRKA 120
Query: 279 PDSWFELKV--NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGM 336
WF ++ NT+VYV+GLP D+TV+E +++ SK GII DP+T++ ++K+Y D + G
Sbjct: 121 ESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GN 179
Query: 337 KKGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAKFEQKGERFIAKQ 389
KGD L YLK SV LA +LLD R K+ + V AKF+ KGE +K+
Sbjct: 180 LKGDGLCCYLKRESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKK 229
>UNIPROTKB|Q5H919 [details] [associations]
symbol:HTATSF1 "HIV Tat-specific factor 1" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:Z97632 UniGene:Hs.204475 HGNC:HGNC:5276
ChiTaRS:HTATSF1 HOGENOM:HOG000202112 IPI:IPI00644724 SMR:Q5H919
MINT:MINT-1403689 STRING:Q5H919 Ensembl:ENST00000425695
Uniprot:Q5H919
Length = 223
Score = 248 (92.4 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 63/167 (37%), Positives = 90/167 (53%)
Query: 219 EEVFPTVNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKP 278
E+ T +ND G + E V++ EE K +P +K E K
Sbjct: 65 EDFIATYQANYGFSND--GASSSTANVEDVHA--RTAEEPPQEKAPEPTDARKKGEKRKA 120
Query: 279 PDSWFELKV--NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGM 336
WF ++ NT+VYV+GLP D+TV+E +++ SK GII DP+T++ ++K+Y D + G
Sbjct: 121 ESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GN 179
Query: 337 KKGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAKFEQKGE 383
KGD L YLK SV LA +LLD R K+ + V AKF+ KGE
Sbjct: 180 LKGDGLCCYLKRESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGE 223
>RGD|1563377 [details] [associations]
symbol:Htatsf1 "HIV-1 Tat specific factor 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1563377 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00390000009902
OrthoDB:EOG4BRWKT IPI:IPI00949770 Ensembl:ENSRNOT00000065636
ArrayExpress:D4A997 Uniprot:D4A997
Length = 776
Score = 269 (99.8 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 85/277 (30%), Positives = 133/277 (48%)
Query: 198 QEDTSSQNDGYGI--EEMTF---LKEEEVFPTVNVTDDL-----ANDEVGKEKLNSTEEK 247
Q + S + D G ++ + L ++ FP +T+D AN + S+
Sbjct: 31 QNEPSGETDSLGQPPDDTPYEWDLDKKAWFP--KITEDFIASYQANYGFSGDGAPSSTGN 88
Query: 248 VNSADN-VVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKV--NTHVYVTGLPDDVTVEE 304
V A+ VEE + + ++ E K WF ++ NT+VYV+GLP D+TV+E
Sbjct: 89 VQDANTKTVEEPPQKEIPETTDSKKRGEKRKAESGWFHVEEDRNTNVYVSGLPPDITVDE 148
Query: 305 MVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFR 364
+++ SK GII DP+T++ ++K+Y D + G KGD L YLK+ SV LA +LLD R
Sbjct: 149 FIQLMSKFGIIMRDPQTEEFKVKLYKDDQ-GNLKGDGLCCYLKKESVELALKLLDEDEIR 207
Query: 365 PDGKIPMSVTQAKFEQKGERFIAKQVDS-XXXXXXXXXXXXMLGWGGRDDA---KLTIPA 420
K+ + V Q F+ KGE +K+ L W A +L
Sbjct: 208 -GYKLHVEVAQ--FQLKGEYDASKKKKKCKDYKKKLSLQQKQLDWRPERRAGPNRLRHER 264
Query: 421 TVILRFMFTPAEMRADENLRSELEADVQEECVKIGPV 457
VIL+ MF P + D + +E+ D++ EC K G +
Sbjct: 265 VVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQI 301
>CGD|CAL0001495 [details] [associations]
symbol:orf19.5767 species:5476 "Candida albicans" [GO:0003723
"RNA binding" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 CGD:CAL0001495 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AACQ01000046 KO:K13093
RefSeq:XP_718102.1 ProteinModelPortal:Q5A8Q7 STRING:Q5A8Q7
GeneID:3640263 KEGG:cal:CaO19.5767 Uniprot:Q5A8Q7
Length = 283
Score = 172 (65.6 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 54/155 (34%), Positives = 83/155 (53%)
Query: 238 KEKLNSTEEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKVNTHVYVTGLP 297
KE+ +T ++ S D+ +E +RKQ D K+E N S + K N+ ++++ LP
Sbjct: 51 KEQWVNTSKRSLSEDDTNKEDIKRQRKQ-DMSKLKEELN----SLKQKKKNSSIFISNLP 105
Query: 298 DDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQL 357
D E+ E FSK G I + +KPRIK+Y + E G KG+AL+ Y S LA ++
Sbjct: 106 VDSGFSEIEEAFSKYGKISVGKD-EKPRIKMYTN-EKGSFKGEALIIYSNPESALLAIEM 163
Query: 358 LDGTPFRPDGKIPMSVTQAKFEQKGERFIAKQVDS 392
+D + +G + V +AKF+ K E KQ DS
Sbjct: 164 MDNAQY--NGNT-IRVEEAKFDNKKENPKKKQ-DS 194
Score = 72 (30.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 417 TIPATVILRFMFTPAEMRADENLRSELEADVQEECVKIGPVDSVKVMKLNVEINCILIIF 476
++ VI+R M E+ D +++ ++ D++EEC IG + ++ + N E +L+ F
Sbjct: 194 SLSKAVIIRNMVRKKELANDIHIKQDIIDDIKEECKNIG-ISDIEDIVFNEENATVLVKF 252
>UNIPROTKB|Q5A8Q7 [details] [associations]
symbol:CUS2 "Potential spliceosome factor" species:237561
"Candida albicans SC5314" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 CGD:CAL0001495 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AACQ01000046 KO:K13093
RefSeq:XP_718102.1 ProteinModelPortal:Q5A8Q7 STRING:Q5A8Q7
GeneID:3640263 KEGG:cal:CaO19.5767 Uniprot:Q5A8Q7
Length = 283
Score = 172 (65.6 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 54/155 (34%), Positives = 83/155 (53%)
Query: 238 KEKLNSTEEKVNSADNVVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKVNTHVYVTGLP 297
KE+ +T ++ S D+ +E +RKQ D K+E N S + K N+ ++++ LP
Sbjct: 51 KEQWVNTSKRSLSEDDTNKEDIKRQRKQ-DMSKLKEELN----SLKQKKKNSSIFISNLP 105
Query: 298 DDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQL 357
D E+ E FSK G I + +KPRIK+Y + E G KG+AL+ Y S LA ++
Sbjct: 106 VDSGFSEIEEAFSKYGKISVGKD-EKPRIKMYTN-EKGSFKGEALIIYSNPESALLAIEM 163
Query: 358 LDGTPFRPDGKIPMSVTQAKFEQKGERFIAKQVDS 392
+D + +G + V +AKF+ K E KQ DS
Sbjct: 164 MDNAQY--NGNT-IRVEEAKFDNKKENPKKKQ-DS 194
Score = 72 (30.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 417 TIPATVILRFMFTPAEMRADENLRSELEADVQEECVKIGPVDSVKVMKLNVEINCILIIF 476
++ VI+R M E+ D +++ ++ D++EEC IG + ++ + N E +L+ F
Sbjct: 194 SLSKAVIIRNMVRKKELANDIHIKQDIIDDIKEECKNIG-ISDIEDIVFNEENATVLVKF 252
>SGD|S000005230 [details] [associations]
symbol:CUS2 "Protein that binds to U2 snRNA and Prp11p"
species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA binding"
evidence=IEA;ISS;IMP] [GO:0005686 "U2 snRNP" evidence=TAS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI;IPI] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 SGD:S000005230
GO:GO:0000166 Gene3D:3.30.70.330 EMBL:BK006947 GO:GO:0005681
GO:GO:0003723 GO:GO:0000398 GO:GO:0005686 EMBL:Z71562 EMBL:AY558016
PIR:S63260 RefSeq:NP_014113.1 ProteinModelPortal:P53830 SMR:P53830
DIP:DIP-2316N IntAct:P53830 MINT:MINT-2787174 STRING:P53830
PaxDb:P53830 EnsemblFungi:YNL286W GeneID:855430 KEGG:sce:YNL286W
CYGD:YNL286w eggNOG:NOG317500 GeneTree:ENSGT00390000009902
KO:K13093 OMA:HISENED OrthoDB:EOG4JWZQ8 NextBio:979307
Genevestigator:P53830 GermOnline:YNL286W Uniprot:P53830
Length = 285
Score = 194 (73.4 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 68/228 (29%), Positives = 115/228 (50%)
Query: 251 ADNVVEEKHNGKRKQPD----KQVEKKEANKPPDSWFELKVNTHVYVTGLPDDVTVEE-M 305
AD + + H K K+ + KQ+++ K + NT +Y++GLP D T +E +
Sbjct: 3 ADELELKGHLKKLKKEELLRRKQLKESNLQKRELEYNNASKNTSIYISGLPTDKTTKEGL 62
Query: 306 VEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFRP 365
E F K G+I+ + + + P K+YV+ + G KGDAL+TY KE SV LA ++++ + F
Sbjct: 63 TEQFCKYGMIRTNRDGE-PLCKLYVN-DKGAFKGDALITYSKEESVTLAIEMMNESIFL- 119
Query: 366 DGKIPMSVTQAKFEQK-GERFIAKQVDSXXXXXXXXXXXXML-----GWGG----RDDAK 415
GK + V +A+F+ K G+ K+ D + G G DD
Sbjct: 120 -GK-QIRVERAQFQNKEGDNMHGKENDLKEFNGPEPPIKRLKKAKSEGEGEVIDYNDDES 177
Query: 416 LT-IPATVILRFMFTPAEMRADENLRSELEADVQEECVKIGPVDSVKV 462
L TVI +F + ++++ ++++ D+ E C +IG VDS+ V
Sbjct: 178 LAKADRTVIFANVFNIYKSYTNDDI-NDIQEDLLEGCEEIGQVDSISV 224
>UNIPROTKB|H7BY36 [details] [associations]
symbol:EWSR1 "RNA-binding protein EWS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS50102 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 EMBL:AC002059 EMBL:AL031186 EMBL:AC000026
HGNC:HGNC:3508 ChiTaRS:EWSR1 ProteinModelPortal:H7BY36 PRIDE:H7BY36
Ensembl:ENST00000360091 Uniprot:H7BY36
Length = 308
Score = 193 (73.0 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ +YV GL D VT++++ + F +CG++K + T +P I IY+DKETG
Sbjct: 6 PPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKP 65
Query: 338 KGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y P+ A + DG F+ K+ +S+ + K
Sbjct: 66 KGDATVSYEDPPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 104
>UNIPROTKB|F1NCS2 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00530000063105 EMBL:AADN02050467 EMBL:AADN02050468
EMBL:AADN02050469 IPI:IPI00590722 Ensembl:ENSGALT00000038026
Uniprot:F1NCS2
Length = 658
Score = 200 (75.5 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 43/101 (42%), Positives = 64/101 (63%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ VYV GL D+VT+E++ + F +CG++K + T +P I +Y+DKETG
Sbjct: 351 PPMDPDEDSDNSSVYVQGLNDNVTLEDLADFFKQCGVVKMNKRTGQPMIHLYIDKETGKP 410
Query: 338 KGDALVTYLKEPSVA-LATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y +PS A A + DG F+ K+ +S+T+ K
Sbjct: 411 KGDATVSY-DDPSTAKTAVEWFDGKDFQ-GSKLKVSLTRKK 449
>UNIPROTKB|F1NDA5 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00530000063105
EMBL:AADN02050467 EMBL:AADN02050468 EMBL:AADN02050469
IPI:IPI00820143 Ensembl:ENSGALT00000013237 OMA:PQTTATY
Uniprot:F1NDA5
Length = 690
Score = 200 (75.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 43/101 (42%), Positives = 64/101 (63%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ VYV GL D+VT+E++ + F +CG++K + T +P I +Y+DKETG
Sbjct: 351 PPMDPDEDSDNSSVYVQGLNDNVTLEDLADFFKQCGVVKMNKRTGQPMIHLYIDKETGKP 410
Query: 338 KGDALVTYLKEPSVA-LATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y +PS A A + DG F+ K+ +S+T+ K
Sbjct: 411 KGDATVSY-DDPSTAKTAVEWFDGKDFQ-GSKLKVSLTRKK 449
>RGD|1307258 [details] [associations]
symbol:Ewsr1 "Ewing sarcoma breakpoint region 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0015030 "Cajal body"
evidence=IDA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0005737 GO:GO:0005730 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0015030 HOGENOM:HOG000038010
OrthoDB:EOG42NJ15 IPI:IPI00364603 EMBL:BC098822 UniGene:Rn.52785
ProteinModelPortal:Q4KM41 SMR:Q4KM41 STRING:Q4KM41 PRIDE:Q4KM41
UCSC:RGD:1307258 InParanoid:Q4KM41 NextBio:630274
ArrayExpress:Q4KM41 Genevestigator:Q4KM41 Uniprot:Q4KM41
Length = 317
Score = 192 (72.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 37/90 (41%), Positives = 57/90 (63%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N+ VYV GL D VT++++ + F +CG++K + T +P I IY+DKETG KGDA V+Y
Sbjct: 21 NSAVYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED 80
Query: 348 EPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
P+ A + DG F+ K+ +S+ + K
Sbjct: 81 PPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 109
>UNIPROTKB|J9P7G2 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 EMBL:AAEX03026610
Ensembl:ENSCAFT00000027552 OMA:FGGRWGP Uniprot:J9P7G2
Length = 650
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N +YV GL D+VT++++ ++F +CGI+K + T +P I IY+DKETG
Sbjct: 350 PPVDPDEDSDNNAIYVQGLNDNVTLDDVADLFKQCGIVKMNKRTGQPMIHIYLDKETGKP 409
Query: 338 KGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y P+ A + DG F+ K+ +S+ Q K
Sbjct: 410 KGDATVSYEDPPTAKAAVEWFDGKDFQ-GSKLKVSLAQKK 448
>DICTYBASE|DDB_G0289547 [details] [associations]
symbol:DDB_G0289547 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0289547 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000142 eggNOG:NOG317500 KO:K13093
OMA:VILKHMF RefSeq:XP_636172.1 ProteinModelPortal:Q54HD0
EnsemblProtists:DDB0233213 GeneID:8627195 KEGG:ddi:DDB_G0289547
InParanoid:Q54HD0 ProtClustDB:CLSZ2429050 Uniprot:Q54HD0
Length = 387
Score = 191 (72.3 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 57/221 (25%), Positives = 109/221 (49%)
Query: 254 VVEEKHNGKRKQPDKQVEKKEANKPPDSWFELKVNTHVYVTGLPDDVTVEEMV--EVFSK 311
+ ++ N ++ K+VEK++ + ++ + ++++G+P D ++ E+ K
Sbjct: 115 ITKDMMNSQQSVYQKKVEKRDLTQE-----QIDNISDLHISGIPMDGSIRELQISNYLKK 169
Query: 312 CGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFRPDGKIPM 371
CG IK++ E +P I + VD E G ALV++ ++ SV +A D T P+ I +
Sbjct: 170 CGYIKKN-EYGRPIISLLVDNENQFT-GCALVSFERKESVPIAILQYDETEISPNNIIRI 227
Query: 372 ---SVTQAKFEQKGERFIAKQVDSXXXXXXXXXXXXMLGWGGRDDAKLTIPATVILRFMF 428
++ ++K E+ KQ S GW ++K TVI++ +F
Sbjct: 228 RKATLEESKLHLVNEKSNKKQKKSHKDRRSEYENEAKYGWAD-SESK-----TVIIKNLF 281
Query: 429 TPAEMRADENLRSELEADVQEE---CVKIGPVDSVKVMKLN 466
+P E D N ++L+AD+++E C K GP+ S+ + + N
Sbjct: 282 SPEEAMVDPNFFNDLQADLEDETHGCGKCGPISSIHIFEYN 322
>UNIPROTKB|E2RA07 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 OMA:EGTSTGY
EMBL:AAEX03014786 EMBL:AAEX03014787 Ensembl:ENSCAFT00000019384
Uniprot:E2RA07
Length = 671
Score = 195 (73.7 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 43/121 (35%), Positives = 68/121 (56%)
Query: 258 KHNGKRKQPDKQVEKKEANK-PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIK 316
+ G K E + +K PP E N+ +YV GL D+VT++++ + F +CG++K
Sbjct: 344 ERGGFNKPGGPMDEGPDLDKGPPVDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQCGVVK 403
Query: 317 EDPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQA 376
+ T +P I IY+DKETG KGDA V+Y P+ A + DG F+ K+ +S+ +
Sbjct: 404 MNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQ-GSKLKVSLARK 462
Query: 377 K 377
K
Sbjct: 463 K 463
>UNIPROTKB|F1RFI8 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005634
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 OMA:EGTSTGY EMBL:CU640468
EMBL:CT737304 Ensembl:ENSSSCT00000010930 Uniprot:F1RFI8
Length = 606
Score = 194 (73.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 39/100 (39%), Positives = 61/100 (61%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ +YV GL D+VT++++ + F +CG++K + T +P I IY+DKETG
Sbjct: 299 PPVDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKP 358
Query: 338 KGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y P+ A + DG F+ K+ +S+ + K
Sbjct: 359 KGDATVSYEDPPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 397
>UNIPROTKB|C9JGE3 [details] [associations]
symbol:EWSR1 "Ewing sarcoma breakpoint region 1, isoform
CRA_e" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0000166
EMBL:CH471095 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 EMBL:AC002059 EMBL:AL031186 EMBL:AC000026
UniGene:Hs.374477 HGNC:HGNC:3508 HOGENOM:HOG000038010 ChiTaRS:EWSR1
IPI:IPI00953325 SMR:C9JGE3 STRING:C9JGE3 Ensembl:ENST00000332050
UCSC:uc003aez.3 Uniprot:C9JGE3
Length = 583
Score = 193 (73.0 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ +YV GL D VT++++ + F +CG++K + T +P I IY+DKETG
Sbjct: 277 PPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKP 336
Query: 338 KGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y P+ A + DG F+ K+ +S+ + K
Sbjct: 337 KGDATVSYEDPPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 375
>UNIPROTKB|Q01844 [details] [associations]
symbol:EWSR1 "RNA-binding protein EWS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50096 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0046872 EMBL:CH471095 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 EMBL:AC002059 MIM:612160 Orphanet:97338
Pathway_Interaction_DB:bard1pathway eggNOG:NOG240581 EMBL:AL031186
MIM:612219 Orphanet:319 EMBL:X66899 EMBL:X72990 EMBL:X72991
EMBL:X72992 EMBL:X72993 EMBL:X72994 EMBL:X72995 EMBL:X72996
EMBL:X72997 EMBL:X72998 EMBL:X72999 EMBL:X73000 EMBL:X73001
EMBL:X73002 EMBL:X73003 EMBL:X73004 EMBL:Y07848 EMBL:CR456490
EMBL:AK056309 EMBL:AK056681 EMBL:AC000026 EMBL:BC000527
EMBL:BC004817 EMBL:BC011048 EMBL:BC072442 EMBL:Y08806 EMBL:AB016435
IPI:IPI00065554 IPI:IPI00293254 IPI:IPI00335961 IPI:IPI00872855
IPI:IPI00879259 PIR:A49358 RefSeq:NP_001156757.1
RefSeq:NP_001156759.1 RefSeq:NP_005234.1 RefSeq:NP_053733.2
UniGene:Hs.374477 PDB:2CPE PDBsum:2CPE ProteinModelPortal:Q01844
SMR:Q01844 IntAct:Q01844 MINT:MINT-2858561 STRING:Q01844
PhosphoSite:Q01844 DMDM:544261 PaxDb:Q01844 PRIDE:Q01844 DNASU:2130
Ensembl:ENST00000332035 Ensembl:ENST00000333395
Ensembl:ENST00000397938 Ensembl:ENST00000406548
Ensembl:ENST00000414183 GeneID:2130 KEGG:hsa:2130 UCSC:uc003aet.3
CTD:2130 GeneCards:GC22P029663 HGNC:HGNC:3508 HPA:CAB004230
MIM:133450 neXtProt:NX_Q01844 Orphanet:83469 PharmGKB:PA27921
HOGENOM:HOG000038010 HOVERGEN:HBG000970 KO:K13209 OMA:EGTSTGY
OrthoDB:EOG42NJ15 PhylomeDB:Q01844 ChiTaRS:EWSR1
EvolutionaryTrace:Q01844 GenomeRNAi:2130 NextBio:8605
ArrayExpress:Q01844 Bgee:Q01844 CleanEx:HS_EWSR1
Genevestigator:Q01844 GermOnline:ENSG00000182944 Uniprot:Q01844
Length = 656
Score = 193 (73.0 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ +YV GL D VT++++ + F +CG++K + T +P I IY+DKETG
Sbjct: 350 PPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKP 409
Query: 338 KGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y P+ A + DG F+ K+ +S+ + K
Sbjct: 410 KGDATVSYEDPPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 448
>UNIPROTKB|D4A458 [details] [associations]
symbol:Ewsr1 "Protein Ewsr1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 IPI:IPI00767290 Ensembl:ENSRNOT00000057377
ArrayExpress:D4A458 Uniprot:D4A458
Length = 618
Score = 192 (72.6 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 37/90 (41%), Positives = 57/90 (63%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N+ VYV GL D VT++++ + F +CG++K + T +P I IY+DKETG KGDA V+Y
Sbjct: 322 NSAVYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED 381
Query: 348 EPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
P+ A + DG F+ K+ +S+ + K
Sbjct: 382 PPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 410
>UNIPROTKB|E2RA46 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 EMBL:AAEX03014786
EMBL:AAEX03014787 Ensembl:ENSCAFT00000019364 Uniprot:E2RA46
Length = 619
Score = 192 (72.6 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 36/90 (40%), Positives = 58/90 (64%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N+ +YV GL D+VT++++ + F +CG++K + T +P I IY+DKETG KGDA V+Y
Sbjct: 323 NSAIYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED 382
Query: 348 EPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
P+ A + DG F+ K+ +S+ + K
Sbjct: 383 PPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 411
>UNIPROTKB|A8E651 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0005634 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG240581
GeneTree:ENSGT00530000063105 CTD:2130 HOGENOM:HOG000038010
HOVERGEN:HBG000970 KO:K13209 OMA:EGTSTGY OrthoDB:EOG42NJ15
EMBL:DAAA02045602 EMBL:BC153844 IPI:IPI00871084
RefSeq:NP_001103270.1 UniGene:Bt.33949 SMR:A8E651 STRING:A8E651
Ensembl:ENSBTAT00000023612 GeneID:534073 KEGG:bta:534073
InParanoid:A8E651 NextBio:20876260 Uniprot:A8E651
Length = 655
Score = 192 (72.6 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 41/101 (40%), Positives = 64/101 (63%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ +YV GL D VT++++V+ F +CG++K + T +P I IY+DKETG
Sbjct: 349 PPVDPDEDSDNSAIYVQGLNDSVTLDDLVDFFKQCGVVKMNKRTGQPMIHIYLDKETGKP 408
Query: 338 KGDALVTYLKEPSVA-LATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y ++P+ A A + DG F+ K+ +S+ + K
Sbjct: 409 KGDATVSY-EDPATAKAAVEWFDGKDFQ-GSKLKVSLARKK 447
>MGI|MGI:99960 [details] [associations]
symbol:Ewsr1 "Ewing sarcoma breakpoint region 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015030 "Cajal body" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50096
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
MGI:MGI:99960 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0046872 EMBL:CH466574
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
eggNOG:NOG240581 GeneTree:ENSGT00530000063105 CTD:2130
HOVERGEN:HBG000970 KO:K13209 OrthoDB:EOG42NJ15 EMBL:X79233
EMBL:AK019460 EMBL:AK151625 EMBL:AL645845 IPI:IPI00742310
PIR:A55726 RefSeq:NP_031994.2 UniGene:Mm.142822
ProteinModelPortal:Q61545 SMR:Q61545 IntAct:Q61545 STRING:Q61545
PhosphoSite:Q61545 PaxDb:Q61545 PRIDE:Q61545
Ensembl:ENSMUST00000079949 GeneID:14030 KEGG:mmu:14030
NextBio:284964 Bgee:Q61545 CleanEx:MM_EWSR1 Genevestigator:Q61545
GermOnline:ENSMUSG00000009079 Uniprot:Q61545
Length = 655
Score = 192 (72.6 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 36/90 (40%), Positives = 58/90 (64%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N+ +YV GL D+VT++++ + F +CG++K + T +P I IY+DKETG KGDA V+Y
Sbjct: 359 NSAIYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED 418
Query: 348 EPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
P+ A + DG F+ K+ +S+ + K
Sbjct: 419 PPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 447
>UNIPROTKB|F1LN98 [details] [associations]
symbol:Ewsr1 "Protein Ewsr1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 IPI:IPI00364603
Ensembl:ENSRNOT00000012634 ArrayExpress:F1LN98 Uniprot:F1LN98
Length = 656
Score = 192 (72.6 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 37/90 (41%), Positives = 57/90 (63%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N+ VYV GL D VT++++ + F +CG++K + T +P I IY+DKETG KGDA V+Y
Sbjct: 360 NSAVYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED 419
Query: 348 EPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
P+ A + DG F+ K+ +S+ + K
Sbjct: 420 PPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 448
>UNIPROTKB|F1MA60 [details] [associations]
symbol:Ewsr1 "Protein Ewsr1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0005634 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 IPI:IPI00764664 Ensembl:ENSRNOT00000057382
ArrayExpress:F1MA60 Uniprot:F1MA60
Length = 661
Score = 192 (72.6 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 37/90 (41%), Positives = 57/90 (63%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N+ VYV GL D VT++++ + F +CG++K + T +P I IY+DKETG KGDA V+Y
Sbjct: 365 NSAVYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED 424
Query: 348 EPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
P+ A + DG F+ K+ +S+ + K
Sbjct: 425 PPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 453
>UNIPROTKB|B0QYK0 [details] [associations]
symbol:EWSR1 "RNA-binding protein EWS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 EMBL:AC002059
EMBL:AL031186 EMBL:AC000026 UniGene:Hs.374477 HGNC:HGNC:3508
HOGENOM:HOG000038010 HOVERGEN:HBG000970 ChiTaRS:EWSR1
IPI:IPI00879242 SMR:B0QYK0 STRING:B0QYK0 Ensembl:ENST00000331029
Uniprot:B0QYK0
Length = 618
Score = 191 (72.3 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 36/90 (40%), Positives = 57/90 (63%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N+ +YV GL D VT++++ + F +CG++K + T +P I IY+DKETG KGDA V+Y
Sbjct: 322 NSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED 381
Query: 348 EPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
P+ A + DG F+ K+ +S+ + K
Sbjct: 382 PPTAKAAVEWFDGKDFQ-GSKLKVSLARKK 410
>UNIPROTKB|J9P1K6 [details] [associations]
symbol:J9P1K6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS50102
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00530000063105 EMBL:AAEX03008745
Ensembl:ENSCAFT00000001155 Uniprot:J9P1K6
Length = 580
Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ +YV GL D+VT++++ + F +CG++K + T +P I IY+DKETG
Sbjct: 291 PPVDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQCGLVKMNKRTGQPMIHIYLDKETGKP 350
Query: 338 KGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y P+ A + DG F+ K+ +S+ K
Sbjct: 351 KGDATVSYEDPPTAKAAVEWFDGKDFQ-GSKLKVSLAGKK 389
>UNIPROTKB|E2RS29 [details] [associations]
symbol:E2RS29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 EMBL:AAEX03026460
Ensembl:ENSCAFT00000019701 Uniprot:E2RS29
Length = 538
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 40/101 (39%), Positives = 62/101 (61%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ +YV GL D+VT++++ + F + G++K + T +P I IY+DKETG
Sbjct: 344 PPVDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQYGVVKMNKRTGQPMIHIYLDKETGKP 403
Query: 338 KGDALVTYLKEPSVA-LATQLLDGTPFRPDGKIPMSVTQAK 377
KGDA V+Y ++P A A + DG F+ K+ +S+ Q K
Sbjct: 404 KGDATVSY-EDPRTAKAAVEWFDGKDFQ-GSKLKVSLAQKK 442
>ZFIN|ZDB-GENE-030131-2317 [details] [associations]
symbol:ewsr1a "Ewing sarcoma breakpoint region 1a"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0007067 "mitosis" evidence=IMP]
[GO:0021954 "central nervous system neuron development"
evidence=IMP] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
ZFIN:ZDB-GENE-030131-2317 GO:GO:0007067 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0021954
eggNOG:NOG240581 HOGENOM:HOG000038010 HOVERGEN:HBG000970 KO:K13209
OrthoDB:EOG42NJ15 EMBL:BC068397 IPI:IPI00488733
RefSeq:NP_001108610.1 UniGene:Dr.5648 ProteinModelPortal:Q6NUX1
PRIDE:Q6NUX1 GeneID:323597 KEGG:dre:323597 CTD:323597
NextBio:20808342 ArrayExpress:Q6NUX1 Bgee:Q6NUX1 Uniprot:Q6NUX1
Length = 624
Score = 174 (66.3 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 34/90 (37%), Positives = 55/90 (61%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N+ +Y+TGL ++ T+EE+ + F GII+ + T P + IY DK+TG KGDA ++Y +
Sbjct: 343 NSTIYITGLTENATLEEVADFFKHSGIIRINKRTGLPAVNIYTDKDTGKPKGDATLSYEE 402
Query: 348 EPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
PS A + DG F+ K+ +S+ + K
Sbjct: 403 PPSAKAAVEWFDGKDFQGK-KLKVSMARRK 431
>UNIPROTKB|E2R9Z1 [details] [associations]
symbol:E2R9Z1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 EMBL:AAEX03004085
Ensembl:ENSCAFT00000019394 Uniprot:E2R9Z1
Length = 561
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 278 PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMK 337
PP E N+ +YV GL D VT++ F +CG++K T +P I IY+DKETG
Sbjct: 281 PPVDPDEDSDNSAIYVQGLNDTVTLDNPAVFFKQCGVVKMSKRTGQPMIHIYLDKETGKP 340
Query: 338 KGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAK 377
K A V+Y P+ A +L DG F+ K+ +S+ + +
Sbjct: 341 KSGATVSYEDPPTAKAAVELFDGKDFQ-GSKLKVSLARKR 379
>ZFIN|ZDB-GENE-061215-102 [details] [associations]
symbol:zgc:158363 "zgc:158363" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 ZFIN:ZDB-GENE-061215-102 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 eggNOG:NOG240581
GeneTree:ENSGT00530000063105 KO:K13098 OrthoDB:EOG4DV5NH
EMBL:CU633910 EMBL:CU929082 EMBL:BC128851 IPI:IPI00829178
RefSeq:NP_001073442.1 UniGene:Dr.104398 SMR:A1A5X7 STRING:A1A5X7
Ensembl:ENSDART00000102410 GeneID:558760 KEGG:dre:558760
InParanoid:A1A5X7 OMA:FARRYEC NextBio:20882619 Uniprot:A1A5X7
Length = 434
Score = 170 (64.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 38/97 (39%), Positives = 56/97 (57%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL +DV +E+ + F + GIIK + +T KP I +Y DK TG KG+A V++
Sbjct: 207 NNTIFVQGLGEDVNAQEVGDYFKQIGIIKVNKKTGKPMINLYSDKATGRLKGEATVSFDD 266
Query: 348 EPSVALATQLLDGTPF--RPDGKIPMSVTQAKFEQKG 382
PS A DG F RP K+ + +A+F Q+G
Sbjct: 267 PPSAKAAIDWFDGKEFNGRPI-KVSFATRRAEFTQRG 302
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 149 NGSASDSVGGYMGRDDHD 166
+GS S GGY R+D D
Sbjct: 118 SGSYGGSQGGYGRRNDGD 135
>WB|WBGene00016173 [details] [associations]
symbol:fust-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0000003 GO:GO:0003676 GO:GO:0005622
eggNOG:NOG240581 GeneTree:ENSGT00530000063105 EMBL:FO080695
KO:K14651 PIR:T15667 RefSeq:NP_495483.1 ProteinModelPortal:Q18265
SMR:Q18265 STRING:Q18265 PaxDb:Q18265 EnsemblMetazoa:C27H5.3.1
EnsemblMetazoa:C27H5.3.2 GeneID:174175 KEGG:cel:CELE_C27H5.3
UCSC:C27H5.3.1 CTD:174175 WormBase:C27H5.3 InParanoid:Q18265
OMA:YVTIRGQ NextBio:882851 Uniprot:Q18265
Length = 448
Score = 166 (63.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 42/108 (38%), Positives = 59/108 (54%)
Query: 280 DSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCG-IIKEDPETKKPRIKIYVDKETGMKK 338
D ELK V+V G+ + +VFS CG I K D + PRIKIY D+ TG K
Sbjct: 194 DGRVELKET--VFVQGISTTANEAYIADVFSTCGDIAKND---RGPRIKIYTDRNTGEPK 248
Query: 339 GDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAKF--EQKGER 384
G+ ++T++ + A + +G PF P G PMS++ AKF + GER
Sbjct: 249 GECMITFVDASAAQQAITMYNGQPF-PGGSSPMSISLAKFRADAGGER 295
>UNIPROTKB|E1BT66 [details] [associations]
symbol:TAF15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00530000063105
OMA:YGNQGSQ EMBL:AADN02025953 EMBL:AADN02025954 IPI:IPI00575015
ProteinModelPortal:E1BT66 Ensembl:ENSGALT00000003204 Uniprot:E1BT66
Length = 443
Score = 163 (62.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 280 DSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKG 339
DS + N ++V GL +DV+ +++ + F + GIIK + +T KP I +Y DK+TG KG
Sbjct: 229 DSESDNSDNNTIFVQGLGEDVSTDQVADYFKQIGIIKTNKKTGKPMINLYTDKDTGKPKG 288
Query: 340 DALVTYLKEPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
+A V++ PS A DG F + K+ + + +F + G
Sbjct: 289 EATVSFDDPPSAKAAIDWFDGKEFNGNVIKVSFATRRPEFMRGG 332
>UNIPROTKB|P35637 [details] [associations]
symbol:FUS "RNA-binding protein FUS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0005737 GO:GO:0005654 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008219 GO:GO:0008270 Reactome:REACT_1675
Gene3D:3.30.70.330 GO:GO:0003723 Orphanet:803 GO:GO:0000398
EMBL:AJ295163 MIM:612160 eggNOG:NOG240581 KO:K13098 Orphanet:275872
Orphanet:79105 EMBL:S62138 PIR:S33798 HOGENOM:HOG000038010 CTD:2521
ChiTaRS:FUS OrthoDB:EOG4DV5NH EMBL:S62140 EMBL:X71427 EMBL:X71428
EMBL:AF071213 EMBL:AC009088 EMBL:BC000402 EMBL:BC002459
IPI:IPI00221354 IPI:IPI00260715 PIR:S33799 RefSeq:NP_001164105.1
RefSeq:NP_004951.1 UniGene:Hs.46894 PDB:2LA6 PDB:2LCW PDB:4FDD
PDBsum:2LA6 PDBsum:2LCW PDBsum:4FDD ProteinModelPortal:P35637
SMR:P35637 DIP:DIP-29857N IntAct:P35637 MINT:MINT-5005976
STRING:P35637 PhosphoSite:P35637 DMDM:544357 PaxDb:P35637
PRIDE:P35637 DNASU:2521 Ensembl:ENST00000254108
Ensembl:ENST00000380244 GeneID:2521 KEGG:hsa:2521 UCSC:uc002ebe.2
UCSC:uc002ebh.3 GeneCards:GC16P031191 HGNC:HGNC:4010 HPA:HPA008784
MIM:137070 MIM:608030 MIM:614782 neXtProt:NX_P35637 Orphanet:99967
PharmGKB:PA28425 HOVERGEN:HBG095056 InParanoid:P35637 OMA:YGTQSTP
PhylomeDB:P35637 GenomeRNAi:2521 NextBio:9927 ArrayExpress:P35637
Bgee:P35637 CleanEx:HS_FUS Genevestigator:P35637
GermOnline:ENSG00000089280 Uniprot:P35637
Length = 526
Score = 165 (63.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL ++VT+E + + F + GIIK + +T +P I +Y D+ETG KG+A V++
Sbjct: 284 NNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDD 343
Query: 348 EPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
PS A DG F + K+ + +A F + G
Sbjct: 344 PPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGG 379
Score = 42 (19.8 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 14/74 (18%), Positives = 25/74 (33%)
Query: 150 GSASDSVGGYMGRDDHDGVPASPXXXXXXXXXXXXRYKWDRGLRAWVPQEDTSSQNDGYG 209
GS+ S Y + + G P G PQ + SQ YG
Sbjct: 82 GSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQ----PQSGSYSQQPSYG 137
Query: 210 IEEMTFLKEEEVFP 223
++ ++ +++ P
Sbjct: 138 GQQQSYGQQQSYNP 151
>UNIPROTKB|H3BPE7 [details] [associations]
symbol:FUS "RNA-binding protein FUS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
ChiTaRS:FUS EMBL:AC009088 HGNC:HGNC:4010 ProteinModelPortal:H3BPE7
SMR:H3BPE7 Ensembl:ENST00000568685 Bgee:H3BPE7 Uniprot:H3BPE7
Length = 527
Score = 165 (63.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL ++VT+E + + F + GIIK + +T +P I +Y D+ETG KG+A V++
Sbjct: 285 NNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDD 344
Query: 348 EPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
PS A DG F + K+ + +A F + G
Sbjct: 345 PPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGG 380
Score = 42 (19.8 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 14/74 (18%), Positives = 25/74 (33%)
Query: 150 GSASDSVGGYMGRDDHDGVPASPXXXXXXXXXXXXRYKWDRGLRAWVPQEDTSSQNDGYG 209
GS+ S Y + + G P G PQ + SQ YG
Sbjct: 82 GSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQ----PQSGSYSQQPSYG 137
Query: 210 IEEMTFLKEEEVFP 223
++ ++ +++ P
Sbjct: 138 GQQQSYGQQQSYNP 151
>ZFIN|ZDB-GENE-040426-1010 [details] [associations]
symbol:fus "fusion (involved in t(12;16) in
malignant liposarcoma)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 ZFIN:ZDB-GENE-040426-1010 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00530000063105 KO:K13098 CTD:2521 EMBL:BX571714
IPI:IPI00785727 RefSeq:NP_957377.2 UniGene:Dr.114403
Ensembl:ENSDART00000055340 GeneID:394058 KEGG:dre:394058
NextBio:20815017 Bgee:F1R0M4 Uniprot:F1R0M4
Length = 541
Score = 164 (62.8 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL DD TV+ + + F + GIIK + +T P I +Y D+ETG KG+A V++
Sbjct: 298 NNTIFVQGLGDDYTVDSVADYFKQIGIIKVNKKTGLPMINLYTDRETGKLKGEATVSFDD 357
Query: 348 EPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
PS A DG F + K+ + +A+F + G
Sbjct: 358 PPSAKAAIDWFDGKDFNGNPIKVSFATRRAEFGRGG 393
>UNIPROTKB|G8ENL4 [details] [associations]
symbol:FUS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 EMBL:CU464163 EMBL:JF940526
Ensembl:ENSSSCT00000036326 Uniprot:G8ENL4
Length = 517
Score = 165 (63.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL ++VT+E + + F + GIIK + +T +P I +Y D+ETG KG+A V++
Sbjct: 275 NNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDD 334
Query: 348 EPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
PS A DG F + K+ + +A F + G
Sbjct: 335 PPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGG 370
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 197 PQEDTSSQNDGYGIEEMTFLKEEEVFP 223
PQ Q GYG ++ ++ +++ P
Sbjct: 126 PQSGGYGQQSGYGGQQQSYGQQQSYNP 152
Score = 38 (18.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 201 TSSQNDGYG 209
TSSQ+ GYG
Sbjct: 116 TSSQSSGYG 124
>MGI|MGI:1353633 [details] [associations]
symbol:Fus "fused in sarcoma" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 MGI:MGI:1353633
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:NOG240581 KO:K13098 HOGENOM:HOG000038010 CTD:2521
ChiTaRS:FUS OrthoDB:EOG4DV5NH OMA:YGTQSTP EMBL:AF224264
IPI:IPI00117063 RefSeq:NP_631888.1 UniGene:Mm.277680
ProteinModelPortal:P56959 SMR:P56959 IntAct:P56959 MINT:MINT-136330
STRING:P56959 PhosphoSite:P56959 PaxDb:P56959 PRIDE:P56959
Ensembl:ENSMUST00000106251 GeneID:233908 KEGG:mmu:233908
HOVERGEN:HBG094940 InParanoid:P56959 NextBio:381951 Bgee:P56959
Genevestigator:P56959 GermOnline:ENSMUSG00000030795 Uniprot:P56959
Length = 518
Score = 165 (63.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL ++VT+E + + F + GIIK + +T +P I +Y D+ETG KG+A V++
Sbjct: 277 NNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDD 336
Query: 348 EPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
PS A DG F + K+ + +A F + G
Sbjct: 337 PPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGG 372
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 13/73 (17%), Positives = 24/73 (32%)
Query: 150 GSASDSVGGYMGRDDHDGVPASPXXXXXXXXXXXXRYKWDRGLRAWVPQEDTSSQNDGYG 209
GS+ S Y + + G P G PQ Q GYG
Sbjct: 83 GSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSSSYGQ----PQSGGYGQQSGYG 138
Query: 210 IEEMTFLKEEEVF 222
++ ++ +++ +
Sbjct: 139 GQQQSYGQQQSSY 151
>RGD|1308864 [details] [associations]
symbol:Fus "fused in sarcoma" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1308864
GO:GO:0000166 EMBL:CH473956 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 eggNOG:NOG240581
GeneTree:ENSGT00530000063105 KO:K13098 HOGENOM:HOG000038010
CTD:2521 OrthoDB:EOG4DV5NH OMA:YGTQSTP EMBL:BC087153
RefSeq:NP_001012137.1 UniGene:Rn.100218 STRING:Q5PQK2
Ensembl:ENSRNOT00000031891 GeneID:317385 KEGG:rno:317385
UCSC:RGD:1308864 InParanoid:Q5PQK2 NextBio:671703
Genevestigator:Q5PQK2 Uniprot:Q5PQK2
Length = 518
Score = 165 (63.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL ++VT+E + + F + GIIK + +T +P I +Y D+ETG KG+A V++
Sbjct: 277 NNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDD 336
Query: 348 EPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
PS A DG F + K+ + +A F + G
Sbjct: 337 PPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGG 372
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 13/73 (17%), Positives = 24/73 (32%)
Query: 150 GSASDSVGGYMGRDDHDGVPASPXXXXXXXXXXXXRYKWDRGLRAWVPQEDTSSQNDGYG 209
GS+ S Y + + G P G PQ Q GYG
Sbjct: 83 GSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSSSYGQ----PQSGGYGQQSGYG 138
Query: 210 IEEMTFLKEEEVF 222
++ ++ +++ +
Sbjct: 139 GQQQSYGQQQSSY 151
>RGD|1566093 [details] [associations]
symbol:RGD1566093 "similar to Fusion (involved in t(12;16) in
malignant liposarcoma)" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1566093
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 OrthoDB:EOG4DV5NH IPI:IPI00361397 PRIDE:D3ZSJ6
Ensembl:ENSRNOT00000031767 Uniprot:D3ZSJ6
Length = 460
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 34/98 (34%), Positives = 55/98 (56%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL ++VT+E + + F + GIIK + +T +P I +Y D+ETG KG+A V++
Sbjct: 221 NNTIFVQGLGENVTIESVADYFKQIGIIKTNEKTGQPMINLYTDRETGKLKGEATVSFDD 280
Query: 348 EPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKGER 384
PS A DG F + K+ + +A F + R
Sbjct: 281 PPSAKTAIDWFDGKEFSGNLIKVSFATRRADFNRVNGR 318
>UNIPROTKB|Q28009 [details] [associations]
symbol:FUS "RNA-binding protein FUS" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0045944 GO:GO:0003723
eggNOG:NOG240581 GeneTree:ENSGT00530000063105 KO:K13098
HOGENOM:HOG000038010 CTD:2521 EMBL:U26024 EMBL:BC119965
IPI:IPI00705463 RefSeq:NP_776337.1 UniGene:Bt.2474
ProteinModelPortal:Q28009 STRING:Q28009 PRIDE:Q28009
Ensembl:ENSBTAT00000007571 GeneID:280796 KEGG:bta:280796
InParanoid:Q28009 OrthoDB:EOG4DV5NH NextBio:20804952 Uniprot:Q28009
Length = 513
Score = 165 (63.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL ++VT+E + + F + GIIK + +T +P I +Y D+ETG KG+A V++
Sbjct: 271 NNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDD 330
Query: 348 EPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
PS A DG F + K+ + +A F + G
Sbjct: 331 PPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGG 366
Score = 38 (18.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/74 (18%), Positives = 24/74 (32%)
Query: 150 GSASDSVGGYMGRDDHDGVPASPXXXXXXXXXXXXRYKWDRGLRAWVPQEDTSSQNDGYG 209
GS+ S Y + + G P G PQ Q GYG
Sbjct: 83 GSSQSSQSSYGQQSSYPGYGQQPAPSGTSGSYGSSSQSSGYGQ----PQGGGYGQQSGYG 138
Query: 210 IEEMTFLKEEEVFP 223
++ ++ +++ P
Sbjct: 139 GQQQSYGQQQSYNP 152
>UNIPROTKB|F1PBJ4 [details] [associations]
symbol:FUS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 OMA:YGTQSTP EMBL:AAEX03004378
EMBL:AAEX03004379 Ensembl:ENSCAFT00000026694 Uniprot:F1PBJ4
Length = 517
Score = 159 (61.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 34/96 (35%), Positives = 54/96 (56%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N ++V GL ++VT+E + + F + GIIK + +T +P I +Y D+ETG KG+A V++
Sbjct: 275 NNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDD 334
Query: 348 EPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
PS A DG F + K + +A F + G
Sbjct: 335 PPSAKAAIDWFDGKEFSGNPIKDSFATRRADFNRGG 370
>UNIPROTKB|F1S187 [details] [associations]
symbol:LOC100518332 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 GeneTree:ENSGT00530000063105
EMBL:CU896616 Ensembl:ENSSSCT00000019273 OMA:TESSSGX Uniprot:F1S187
Length = 406
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 280 DSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKG 339
DS + N ++V GL + V+ +++ E F + GIIK + +T KP I +Y DK+TG KG
Sbjct: 28 DSESDNSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKG 87
Query: 340 DALVTYLKEPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
+A V++ PS A DG F + K+ + + +F + G
Sbjct: 88 EATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGG 131
>UNIPROTKB|K7EPT6 [details] [associations]
symbol:TAF15 "TATA-binding protein-associated factor 2N"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
Gene3D:3.30.70.330 EMBL:AC015849 HGNC:HGNC:11547
Ensembl:ENST00000592237 Uniprot:K7EPT6
Length = 449
Score = 155 (59.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 280 DSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKG 339
DS + N ++V GL + V+ +++ E F + GIIK + +T KP I +Y DK+TG KG
Sbjct: 134 DSESDNSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKG 193
Query: 340 DALVTYLKEPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
+A V++ PS A DG F + K+ + + +F + G
Sbjct: 194 EATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGG 237
>UNIPROTKB|E1BGX1 [details] [associations]
symbol:E1BGX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 OMA:YGNQGSQ EMBL:DAAA02048453
EMBL:DAAA02048454 IPI:IPI00730036 Ensembl:ENSBTAT00000009084
Uniprot:E1BGX1
Length = 470
Score = 155 (59.6 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 280 DSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKG 339
DS + N ++V GL + V+ +++ E F + GIIK + +T KP I +Y DK+TG KG
Sbjct: 261 DSESDNSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKG 320
Query: 340 DALVTYLKEPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
+A V++ PS A DG F + K+ + + +F + G
Sbjct: 321 EATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGG 364
>RGD|1309595 [details] [associations]
symbol:Taf15 "TAF15 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
RGD:1309595 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 EMBL:AC119615 IPI:IPI00950713
PRIDE:F1M8P1 Ensembl:ENSRNOT00000014438 ArrayExpress:F1M8P1
Uniprot:F1M8P1
Length = 554
Score = 155 (59.6 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 280 DSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKG 339
DS + N ++V GL + V+ +++ E F + GIIK + +T KP I +Y DK+TG KG
Sbjct: 223 DSESDNSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKG 282
Query: 340 DALVTYLKEPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
+A V++ PS A DG F + K+ + + +F + G
Sbjct: 283 EATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGG 326
>UNIPROTKB|D3ZZM1 [details] [associations]
symbol:Taf15 "Protein Taf15" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
RGD:1309595 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 EMBL:AC119615 IPI:IPI00950003
ProteinModelPortal:D3ZZM1 Ensembl:ENSRNOT00000064396
ArrayExpress:D3ZZM1 Uniprot:D3ZZM1
Length = 558
Score = 155 (59.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 280 DSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKG 339
DS + N ++V GL + V+ +++ E F + GIIK + +T KP I +Y DK+TG KG
Sbjct: 223 DSESDNSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKG 282
Query: 340 DALVTYLKEPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
+A V++ PS A DG F + K+ + + +F + G
Sbjct: 283 EATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGG 326
>UNIPROTKB|F1PB61 [details] [associations]
symbol:TAF15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 CTD:8148 KO:K14651
OMA:YGNQGSQ EMBL:AAEX03006620 EMBL:AAEX03006619 RefSeq:XP_548255.2
ProteinModelPortal:F1PB61 Ensembl:ENSCAFT00000028877 GeneID:491135
KEGG:cfa:491135 Uniprot:F1PB61
Length = 571
Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 280 DSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKG 339
DS + N ++V GL + V+ +++ E F + GIIK + +T KP I +Y DK+TG KG
Sbjct: 224 DSESDNSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKG 283
Query: 340 DALVTYLKEPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
+A V++ PS A DG F + K+ + + +F + G
Sbjct: 284 EATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGG 327
>ZFIN|ZDB-GENE-030131-1600 [details] [associations]
symbol:ewsr1b "Ewing sarcoma breakpoint region 1b"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IMP] [GO:0007067 "mitosis"
evidence=IMP] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
ZFIN:ZDB-GENE-030131-1600 GO:GO:0007067 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0021954
GeneTree:ENSGT00530000063105 HOGENOM:HOG000038010
HOVERGEN:HBG000970 EMBL:BX664747 EMBL:BC097019 UniGene:Dr.76923
SMR:Q4QRG0 STRING:Q4QRG0 Ensembl:ENSDART00000003998 OMA:PVINIYL
Uniprot:Q4QRG0
Length = 579
Score = 153 (58.9 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 33/91 (36%), Positives = 55/91 (60%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N+ +Y+TGL ++ T+ EM E F G I+ + +P I IY DK++G KGDA ++Y +
Sbjct: 311 NSTIYITGLTENATLPEMAEFFKHTGAIRINRRLNQPAINIYTDKDSGKPKGDATLSY-E 369
Query: 348 EPSVA-LATQLLDGTPFRPDGKIPMSVTQAK 377
EP+ A A + DG F+ ++ +S+ + K
Sbjct: 370 EPAFAKAAVEHFDGKEFQ-GRRLKVSMARRK 399
Score = 46 (21.3 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 63 GRSEWQPLSSIPQFLSGISQQVARGSTAVPCNDGIEEVREQIEEAA-GMQSQSFSSAEQG 121
G S+ QP +S PQ S S Q A +A G + Q ++ G Q QS + QG
Sbjct: 137 GYSQ-QPAASAPQSYSA-SSQPAYNQSAYSQPAGYSQPGYQAQQPGYGQQQQS--AYGQG 192
Query: 122 VP 123
P
Sbjct: 193 QP 194
>UNIPROTKB|Q92804 [details] [associations]
symbol:TAF15 "TATA-binding protein-associated factor 2N"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:CH471147 eggNOG:NOG240581 HOGENOM:HOG000038010 EMBL:AC015849
EMBL:U51334 EMBL:X98893 EMBL:AB010067 EMBL:AY197697 EMBL:AK313223
IPI:IPI00020194 IPI:IPI00294426 PIR:S71954 RefSeq:NP_003478.1
RefSeq:NP_631961.1 UniGene:Hs.402752 ProteinModelPortal:Q92804
SMR:Q92804 IntAct:Q92804 STRING:Q92804 PhosphoSite:Q92804
DMDM:8928305 PaxDb:Q92804 PRIDE:Q92804 DNASU:8148
Ensembl:ENST00000311979 GeneID:8148 KEGG:hsa:8148 UCSC:uc002hkc.3
UCSC:uc002hkd.3 CTD:8148 GeneCards:GC17P034136 HGNC:HGNC:11547
HPA:HPA052059 MIM:601574 neXtProt:NX_Q92804 PharmGKB:PA36322
HOVERGEN:HBG005755 InParanoid:Q92804 KO:K14651 OMA:YGNQGSQ
OrthoDB:EOG4MW872 PhylomeDB:Q92804 ChiTaRS:TAF15 GenomeRNAi:8148
NextBio:30819 PMAP-CutDB:Q92804 ArrayExpress:Q92804 Bgee:Q92804
CleanEx:HS_TAF15 Genevestigator:Q92804 GermOnline:ENSG00000172660
Uniprot:Q92804
Length = 592
Score = 155 (59.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 280 DSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKG 339
DS + N ++V GL + V+ +++ E F + GIIK + +T KP I +Y DK+TG KG
Sbjct: 225 DSESDNSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKG 284
Query: 340 DALVTYLKEPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
+A V++ PS A DG F + K+ + + +F + G
Sbjct: 285 EATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGG 328
>UNIPROTKB|F1LWL0 [details] [associations]
symbol:F1LWL0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00530000063105 IPI:IPI00209373 PRIDE:F1LWL0
Ensembl:ENSRNOT00000022171 Uniprot:F1LWL0
Length = 441
Score = 152 (58.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 274 EANKPPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKE 333
E DS + N ++V GL + ++ +++ E F + GIIK + +T KP I +Y DK+
Sbjct: 186 EPRPDADSESDNSDNNTIFVQGLGEGLSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKD 245
Query: 334 TGMKKGDALVTYLKEPSVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
TG KG+A V++ PS A DG F + K+ + + +F + G
Sbjct: 246 TGKLKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGG 295
>FB|FBgn0011571 [details] [associations]
symbol:caz "cabeza" species:7227 "Drosophila melanogaster"
[GO:0035327 "transcriptionally active chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005669 "transcription factor TFIID complex" evidence=ISS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:2000673
"positive regulation of motor neuron apoptotic process"
evidence=IMP] [GO:0008345 "larval locomotory behavior"
evidence=IMP] [GO:0048749 "compound eye development" evidence=IMP]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0005654 GO:GO:0000166 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0008344 GO:GO:0000398 GO:GO:0071013 EMBL:U13178 EMBL:L37083
EMBL:BT004875 EMBL:M15765 EMBL:AY094763 PIR:S54729
RefSeq:NP_523365.2 UniGene:Dm.2872 ProteinModelPortal:Q27294
SMR:Q27294 IntAct:Q27294 STRING:Q27294 PaxDb:Q27294
EnsemblMetazoa:FBtr0074217 GeneID:32587 KEGG:dme:Dmel_CG3606
CTD:32587 FlyBase:FBgn0011571 eggNOG:NOG240581
GeneTree:ENSGT00530000063105 InParanoid:Q27294 KO:K13098
OMA:ITQEDTI OrthoDB:EOG4PC889 PhylomeDB:Q27294 ChiTaRS:caz
GenomeRNAi:32587 NextBio:779303 Bgee:Q27294 GermOnline:CG3606
Uniprot:Q27294
Length = 399
Score = 144 (55.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 291 VYVTGLPDDVTVEEMVEV-FSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEP 349
++V+G+ D T E+ +E F GIIK+D T KP+I +Y +KETG KG+A VTY
Sbjct: 122 IFVSGM-DPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTN 180
Query: 350 SVALATQLLDGTPFRPDG-KIPMSVTQAKFEQKG 382
+ A + DG F + K+ ++ Q + + G
Sbjct: 181 AAQSAIEWFDGRDFNGNAIKVSLAQRQNNWNKGG 214
>FB|FBgn0037939 [details] [associations]
symbol:CG14718 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 EMBL:AE014297
GO:GO:0000166 GO:GO:0008270 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0005622 GeneTree:ENSGT00530000063105 HSSP:Q9Y5S9
EMBL:AY051469 RefSeq:NP_650107.1 UniGene:Dm.4593 SMR:Q9VGJ3
MINT:MINT-323181 STRING:Q9VGJ3 EnsemblMetazoa:FBtr0082426
GeneID:41413 KEGG:dme:Dmel_CG14718 UCSC:CG14718-RA
FlyBase:FBgn0037939 eggNOG:NOG291204 InParanoid:Q9VGJ3
OrthoDB:EOG4TMPHH GenomeRNAi:41413 NextBio:823740 Uniprot:Q9VGJ3
Length = 446
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 291 VYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLKEPS 350
V+V G+ +VT +++ F K G+IK D T KP+I +Y +K TG KG+A +TY+ S
Sbjct: 223 VFVLGMRLNVTKNDIILFFGKVGVIKMDESTNKPKIFVYKNKITGRSKGEATITYVSPFS 282
Query: 351 VALATQLLDGTPF 363
A L G F
Sbjct: 283 AQAAISCLSGAKF 295
>TAIR|locus:2011967 [details] [associations]
symbol:TAF15 "TBP-associated factor 15" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
eggNOG:NOG240581 HSSP:O95218 EMBL:AF367295 EMBL:AY091686
EMBL:AY463618 IPI:IPI00525266 RefSeq:NP_564565.1 UniGene:At.28724
ProteinModelPortal:Q9AST1 SMR:Q9AST1 IntAct:Q9AST1 STRING:Q9AST1
PaxDb:Q9AST1 PRIDE:Q9AST1 EnsemblPlants:AT1G50300.1 GeneID:841452
KEGG:ath:AT1G50300 TAIR:At1g50300 HOGENOM:HOG000030536
InParanoid:Q9AST1 OMA:GTDENML PhylomeDB:Q9AST1
ProtClustDB:CLSN2688634 ArrayExpress:Q9AST1 Genevestigator:Q9AST1
Uniprot:Q9AST1
Length = 372
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 288 NTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETKKPRIKIYVDKETGMKKGDALVTYLK 347
N VYV+ LP + + F G++K D T P++ +Y DKET KGDA VTY +
Sbjct: 7 NGSVYVSNLPLGTDENMLADYFGTIGLLKRDKRTGTPKVWLYRDKETDEPKGDATVTY-E 65
Query: 348 EPSVALA 354
+P ALA
Sbjct: 66 DPHAALA 72
>TAIR|locus:2083248 [details] [associations]
symbol:AT3G52660 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 eggNOG:NOG258596
Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P19339 EMBL:AL353912
KO:K13161 HOGENOM:HOG000243749 ProtClustDB:CLSN2698006
EMBL:BT029158 EMBL:AK176325 EMBL:AK176862 IPI:IPI00534328
PIR:T49019 RefSeq:NP_001030849.1 RefSeq:NP_190834.1
UniGene:At.48763 ProteinModelPortal:Q9LXJ8 SMR:Q9LXJ8 PaxDb:Q9LXJ8
PRIDE:Q9LXJ8 EnsemblPlants:AT3G52660.1 EnsemblPlants:AT3G52660.2
GeneID:824432 KEGG:ath:AT3G52660 TAIR:At3g52660 InParanoid:Q9LXJ8
OMA:HDSMESE PhylomeDB:Q9LXJ8 ArrayExpress:Q9LXJ8
Genevestigator:Q9LXJ8 Uniprot:Q9LXJ8
Length = 471
Score = 128 (50.1 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 54/181 (29%), Positives = 84/181 (46%)
Query: 202 SSQNDGYGIEEMTFLKEEEVFPTVNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNG 261
S +D EE L + P + +++ +EV +E++ EE++ V EE+
Sbjct: 9 SEAHDSMESEERVDLDGDND-PEEILEEEVEYEEVEEEEIEEIEEEIEEEVEVEEEEEEE 67
Query: 262 KRKQPDKQVEKKEANK----PPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKE 317
+++ EKK + PP + VY+ G+P D T E ++ F CG I E
Sbjct: 68 DAVATEEEEEKKRHVELLALPPHG-------SEVYLGGIPTDAT-EGDLKGF--CGSIGE 117
Query: 318 DPETKKPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFRPDGK-IPMSVTQA 376
E ++I +K++G KG A VT+ + A A L+ T FR GK I S TQA
Sbjct: 118 VTE-----VRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFR--GKRIKCSTTQA 170
Query: 377 K 377
K
Sbjct: 171 K 171
Score = 41 (19.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 440 RSELEADVQEECVKIGPVDSVKVMKLNVE 468
R+ +E+D+++ +IGP V++++L E
Sbjct: 181 RNWMESDIKKAANRIGP--GVQIVELPKE 207
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.132 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 487 451 0.00092 118 3 11 23 0.48 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 622 (66 KB)
Total size of DFA: 289 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.64u 0.16s 44.80t Elapsed: 00:00:02
Total cpu time: 44.65u 0.16s 44.81t Elapsed: 00:00:02
Start: Fri May 10 07:37:42 2013 End: Fri May 10 07:37:44 2013