BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011384
(487 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 12/294 (4%)
Query: 41 KIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-GRQVAVK--KPSKNQEISQEVD 97
+++ F +L+ A++ FS + +LG+G G VYK L G VAVK K + Q +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 98 NEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS---NNRPLNWGRRIR 154
E+E++S L+ L GF +RLLV +M+NG++ L + PL+W +R R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 155 LALQVAKAVEILHSEM-PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
+AL A+ + LH P IIHRD+K+AN+L+D F A +GDFGLA +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 202
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGF----SPPSIVDWAAP 269
GTIG++ P Y++ S KTDVF +G++LLE+I+ ++A D+ ++DW
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 270 LIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTG 323
L+K+ K+ ++ D + +QL +A+ C +S RP M E+V L G
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 161/296 (54%), Gaps = 16/296 (5%)
Query: 41 KIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-GRQVAVK--KPSKNQEISQEVD 97
+++ F +L+ A++ F + +LG+G G VYK L G VAVK K + Q +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 98 NEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS---NNRPLNWGRRIR 154
E+E++S L+ L GF +RLLV +M+NG++ L + PL+W +R R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 155 LALQVAKAVEILHSEM-PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
+AL A+ + LH P IIHRD+K+AN+L+D F A +GDFGLA + +++
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA---KLMDYKDXHVX 192
Query: 214 PA--GTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGF----SPPSIVDWA 267
A G IG++ P Y++ S KTDVF +G++LLE+I+ ++A D+ ++DW
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 268 APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTG 323
L+K+ K+ ++ D + +QL +A+ C +S RP M E+V L G
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 158/280 (56%), Gaps = 15/280 (5%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLR-GRQVAVKKPSKNQEISQ---EVDNEIEILS 104
DLE ATN F + L+G G G VYK VLR G +VA+K+ + E SQ E + EIE LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIEEFETEIETLS 90
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---LNWGRRIRLALQVAK 161
P LV+L+GF ++ + +L+ ++M NG L L+ ++ P ++W +R+ + + A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
+ LH+ IIHRD+KS N+L+D NF ++ DFG++ + + GT+GY+
Sbjct: 151 GLHYLHTR--AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIV---DWAAPLIKKGKILS 278
DP Y L+ K+DV+SFG++L E++ R AI + P +V +WA G++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 279 VFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
+ DP + P ++ AV+C+ E RPSM +++
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 157/280 (56%), Gaps = 15/280 (5%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLR-GRQVAVKKPSKNQEISQ---EVDNEIEILS 104
DLE ATN F + L+G G G VYK VLR G +VA+K+ + E SQ E + EIE LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIEEFETEIETLS 90
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---LNWGRRIRLALQVAK 161
P LV+L+GF ++ + +L+ ++M NG L L+ ++ P ++W +R+ + + A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
+ LH+ IIHRD+KS N+L+D NF ++ DFG++ + GT+GY+
Sbjct: 151 GLHYLHTR--AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIV---DWAAPLIKKGKILS 278
DP Y L+ K+DV+SFG++L E++ R AI + P +V +WA G++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 279 VFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
+ DP + P ++ AV+C+ E RPSM +++
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 152/298 (51%), Gaps = 16/298 (5%)
Query: 41 KIQHFDYSDLEAATNGFSEQKL------LGKGSHGSVYKAVLRGRQVAVKKPS-----KN 89
+ F + +L+ TN F E+ + +G+G G VYK + VAVKK +
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 90 QEISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH--SNNRPL 147
+E+ Q+ D EI++++K LV LLGFS+D D LV +M NG+L D L PL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 148 NWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNF 207
+W R ++A A + LH IHRDIKSAN+L+D F A++ DFGLA
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 208 RFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWA 267
+ GT Y+ P + + ++ K+D++SFG++LLEII+ A+D P ++D
Sbjct: 189 TVMXSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247
Query: 268 APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLS 325
+ + K + + + D + + +A +C+ + +RP +K++ L ++
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 151/298 (50%), Gaps = 16/298 (5%)
Query: 41 KIQHFDYSDLEAATNGFSEQKL------LGKGSHGSVYKAVLRGRQVAVKKPS-----KN 89
+ F + +L+ TN F E+ + +G+G G VYK + VAVKK +
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 90 QEISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH--SNNRPL 147
+E+ Q+ D EI++++K LV LLGFS+D D LV +M NG+L D L PL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 148 NWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNF 207
+W R ++A A + LH IHRDIKSAN+L+D F A++ DFGLA
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 208 RFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWA 267
GT Y+ P + + ++ K+D++SFG++LLEII+ A+D P ++D
Sbjct: 189 TVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247
Query: 268 APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLS 325
+ + K + + + D + + +A +C+ + +RP +K++ L ++
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 151/298 (50%), Gaps = 16/298 (5%)
Query: 41 KIQHFDYSDLEAATNGFSEQKL------LGKGSHGSVYKAVLRGRQVAVKKPS-----KN 89
+ F + +L+ TN F E+ + +G+G G VYK + VAVKK +
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 64
Query: 90 QEISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH--SNNRPL 147
+E+ Q+ D EI++++K LV LLGFS+D D LV +M NG+L D L PL
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 148 NWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNF 207
+W R ++A A + LH IHRDIKSAN+L+D F A++ DFGLA
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 208 RFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWA 267
GT Y+ P + + ++ K+D++SFG++LLEII+ A+D P ++D
Sbjct: 183 XVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 241
Query: 268 APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLS 325
+ + K + + + D + + +A +C+ + +RP +K++ L ++
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 299
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 16/294 (5%)
Query: 41 KIQHFDYSDLEAATNGFSEQKL------LGKGSHGSVYKAVLRGRQVAVKKPS-----KN 89
+ F + +L+ TN F E+ + G+G G VYK + VAVKK +
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 61
Query: 90 QEISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH--SNNRPL 147
+E+ Q+ D EI++ +K LV LLGFS+D D LV + NG+L D L PL
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 148 NWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNF 207
+W R ++A A + LH IHRDIKSAN+L+D F A++ DFGLA
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 208 RFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWA 267
+ GT Y P + + ++ K+D++SFG++LLEII+ A+D P ++D
Sbjct: 180 XVXXSRIVGTTAYXAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 238
Query: 268 APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
+ + K + + + D + +A +C+ + +RP +K++ L
Sbjct: 239 EEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 144/287 (50%), Gaps = 20/287 (6%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVK---KPSKNQEISQEVDNEIE 101
D D++ + ++ +G GS G+V++A G VAVK + + E E E+
Sbjct: 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA 86
Query: 102 ILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNN--RPLNWGRRIRLALQV 159
I+ ++ P +V +G + +V E++S G+LY +LH + L+ RR+ +A V
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 160 AKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG 219
AK + LH+ PPI+HRD+KS N+L+D+ + ++ DFGL+ R F S AGT
Sbjct: 147 AKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS-RLKASXF-LXSKXAAGTPE 204
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSV 279
++ P + + + K+DV+SFG++L E+ + ++ +P +V K+ +I
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG-NLNPAQVVAAVGFKCKRLEIPRN 263
Query: 280 FDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSK 326
+P Q+A I C + +RPS I+D L L K
Sbjct: 264 LNP------------QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 144/287 (50%), Gaps = 20/287 (6%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVK---KPSKNQEISQEVDNEIE 101
D D++ + ++ +G GS G+V++A G VAVK + + E E E+
Sbjct: 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA 86
Query: 102 ILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNN--RPLNWGRRIRLALQV 159
I+ ++ P +V +G + +V E++S G+LY +LH + L+ RR+ +A V
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 160 AKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG 219
AK + LH+ PPI+HR++KS N+L+D+ + ++ DFGL+ R F S AGT
Sbjct: 147 AKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS-RLKASTF-LSSKSAAGTPE 204
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSV 279
++ P + + + K+DV+SFG++L E+ + ++ +P +V K+ +I
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG-NLNPAQVVAAVGFKCKRLEIPRN 263
Query: 280 FDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSK 326
+P Q+A I C + +RPS I+D L L K
Sbjct: 264 LNP------------QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 140/299 (46%), Gaps = 45/299 (15%)
Query: 42 IQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIE 101
+ DY ++E ++++G+G+ G V KA R + VA+K+ E + E+
Sbjct: 2 LHMIDYKEIEV-------EEVVGRGAFGVVCKAKWRAKDVAIKQIESESE-RKAFIVELR 53
Query: 102 ILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNW---GRRIRLALQ 158
LS+++ P +V L G + LV+E+ G+LY+VLH PL + + LQ
Sbjct: 54 QLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQ 110
Query: 159 VAKAVEILHSEMP-PIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAG 216
++ V LHS P +IHRD+K N+L+ ++ DFG A + + T G
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKG 165
Query: 217 TIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAA------PL 270
+ ++ P N S K DVFS+GI+L E+I+ RK D P + WA PL
Sbjct: 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL 225
Query: 271 IKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
IK +P P + ++ RC +RPSM+EIV +T L + P
Sbjct: 226 IKN----------LPKPIESLM--------TRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 140/299 (46%), Gaps = 45/299 (15%)
Query: 42 IQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIE 101
+ DY ++E ++++G+G+ G V KA R + VA+K+ E + E+
Sbjct: 3 LHMIDYKEIEV-------EEVVGRGAFGVVCKAKWRAKDVAIKQIESESE-RKAFIVELR 54
Query: 102 ILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNW---GRRIRLALQ 158
LS+++ P +V L G + LV+E+ G+LY+VLH PL + + LQ
Sbjct: 55 QLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQ 111
Query: 159 VAKAVEILHSEMP-PIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAG 216
++ V LHS P +IHRD+K N+L+ ++ DFG A + + T G
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKG 166
Query: 217 TIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAA------PL 270
+ ++ P N S K DVFS+GI+L E+I+ RK D P + WA PL
Sbjct: 167 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL 226
Query: 271 IKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
IK +P P + ++ RC +RPSM+EIV +T L + P
Sbjct: 227 IKN----------LPKPIESLM--------TRCWSKDPSQRPSMEEIVKIMTHLMRYFP 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T PAG I
Sbjct: 126 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAPAGAKFPIK 179
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 219
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T PAG I
Sbjct: 125 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAPAGAKFPIK 178
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 218
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG +++EFM+ G L D L NR +N + +A Q++ A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 182
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 126 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 179
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 219
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 182
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 222
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 126 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 179
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 219
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 76
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 136
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 137 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 190
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 230
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 177
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 217
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 128 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 181
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 221
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 177
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 217
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 182
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 222
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG +++EFM+ G L D L NR +N + +A Q++ A
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D T AG I
Sbjct: 125 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----XTAHAGAKFPIK 178
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 218
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG +++EFM+ G L D L NR ++ + +A Q++ A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 177
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 217
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 130/286 (45%), Gaps = 43/286 (15%)
Query: 61 KLLGKGSHGSVYKAVLR--GRQVAVKKPSK-NQEISQEVDNEIEILSKIHSPRLVNLLGF 117
++LGKG G K R G + +K+ + ++E + E++++ + P ++ +G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
K + E++ GTL ++ S + W +R+ A +A + LHS IIHRD
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRD 133
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG--------------TIGYLDP 223
+ S N L+ N N + DFGLA R VD T P G +G +P
Sbjct: 134 LNSHNCLVRENKNVVVADFGLA-RLMVDE----KTQPEGLRSLKKPDRKKRYTVVG--NP 186
Query: 224 CYVTPDNLS-----TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILS 278
++ P+ ++ K DVFSFGI+L EII R D + P ++ D+ L +G +
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIG-RVNADPDYLPRTM-DFG--LNVRGFLDR 242
Query: 279 VFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P PP P I VRC E+RPS ++ WL L
Sbjct: 243 YCPPNCPPSFFP--------ITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG +++EFM+ G L D L NR ++ + +A Q++ A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 177
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 217
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 28/218 (12%)
Query: 50 LEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVK--KPSKNQEISQEVDN---EIEILS 104
LE + ++++G G G VY+A G +VAVK + +++ISQ ++N E ++ +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP----LNWGRRIRLALQVA 160
+ P ++ L G + LV+EF G L VL P +NW A+Q+A
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIA 115
Query: 161 KAVEILHSE-MPPIIHRDIKSANVLIDR--------NFNARLGDFGLALRCGVDNFRFRS 211
+ + LH E + PIIHRD+KS+N+LI + N ++ DFGLA R
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTK 171
Query: 212 TPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
AG ++ P + S +DV+S+G+LL E+++
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 63 LGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
LG G +G VY+ V + VAVK ++ +E E ++ +I P LV LLG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 121 SKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
++ EFM+ G L D L NR ++ + +A Q++ A+E L E IHRD+
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKNFIHRDLA 136
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTPDNLSTKTD 236
+ N L+ N ++ DFGL+ D F T AG I + P + + S K+D
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLMTGDTF----TAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 237 VFSFGILLLEIISCRKAIDIGFSPPSIVD 265
V++FG+LL EI + + G P + +
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR ++ + +A Q++ A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 177
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 217
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D T AG I
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----XTAHAGAKFPIK 182
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 222
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR ++ + +A Q++ A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 177
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 217
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR ++ + +A Q++ A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHRD+ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 182
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 222
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 267
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 327
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHR++ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 328 MEYL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 381
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 421
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 309
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR +N + +A Q++ A
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHR++ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 370 MEYL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 423
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 463
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 33/295 (11%)
Query: 47 YSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVK-----KPSKNQEISQEVDNEIE 101
Y ++EA+ S + +G GS G+VYK G VAVK P+ Q Q NE+
Sbjct: 30 YWEIEASEVMLSTR--IGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQ--FQAFRNEVA 84
Query: 102 ILSKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVA 160
+L K ++ +G+ +KD L +V ++ +LY LH + I +A Q A
Sbjct: 85 VLRKTRHVNILLFMGYM--TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTA 142
Query: 161 KAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGY 220
+ ++ LH++ IIHRD+KS N+ + ++GDFGLA + + P G++ +
Sbjct: 143 QGMDYLHAK--NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 221 LDPCYV-TPDN--LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI- 276
+ P + DN S ++DV+S+GI+L E+++ ++ +S + D ++ +G
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG----ELPYSHINNRDQIIFMVGRGYAS 256
Query: 277 --LSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
LS P K + + CV+ +E RP +I+ + L +P
Sbjct: 257 PDLSKLYKNCP--------KAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 63 LGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
LG G +G VY+ V + VAVK ++ +E E ++ +I P LV LLG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 121 SKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+++EFM+ G L D L NR ++ + +A Q++ A+E L E IHRD+
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKNFIHRDLA 136
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTPDNLSTKTD 236
+ N L+ N ++ DFGL+ D T AG I + P + + S K+D
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLMTGDT----XTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 237 VFSFGILLLEIISCRKAIDIGFSPPSIVD 265
V++FG+LL EI + + G P + +
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 14/193 (7%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
+ +GKG G V RG +VAVK KN +Q E +++++ LV LLG +
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVK-CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 121 SKDRLLVV-EFMSNGTLYDVLHSNNRPLNWGR-RIRLALQVAKAVEILHSEMPPIIHRDI 178
K L +V E+M+ G+L D L S R + G ++ +L V +A+E L E +HRD+
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFVHRDL 143
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT--IGYLDPCYVTPDNLSTKTD 236
+ NVL+ + A++ DFGL ST G + + P + STK+D
Sbjct: 144 AARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 237 VFSFGILLLEIIS 249
V+SFGILL EI S
Sbjct: 197 VWSFGILLWEIYS 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 136/275 (49%), Gaps = 29/275 (10%)
Query: 63 LGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFS 118
+G GS G+VYK G + + V P+ Q Q NE+ +L K ++ +G+S
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 119 NDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
+K +L +V ++ +LY LH++ + I +A Q A+ ++ LH++ IIHRD
Sbjct: 90 --TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK--SIIHRD 145
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN---LSTK 234
+KS N+ + + ++GDFGLA + + +G+I ++ P + + S +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 235 TDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---LSVFDPRIPPPKDPI 291
+DV++FGI+L E+++ + + +S + D ++ +G + LS P
Sbjct: 206 SDVYAFGIVLYELMTGQ----LPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP------ 255
Query: 292 VRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSK 326
K++ + C++ R+ RPS I+ + L++
Sbjct: 256 --KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 14/193 (7%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
+ +GKG G V RG +VAVK KN +Q E +++++ LV LLG +
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVK-CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 121 SKDRLLVV-EFMSNGTLYDVLHSNNRPLNWGR-RIRLALQVAKAVEILHSEMPPIIHRDI 178
K L +V E+M+ G+L D L S R + G ++ +L V +A+E L E +HRD+
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFVHRDL 315
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT--IGYLDPCYVTPDNLSTKTD 236
+ NVL+ + A++ DFGL ST G + + P + STK+D
Sbjct: 316 AARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 237 VFSFGILLLEIIS 249
V+SFGILL EI S
Sbjct: 369 VWSFGILLWEIYS 381
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 63 LGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFS 118
+G GS G+VYK G + + V P+ Q Q NE+ +L K ++ +G+S
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ +V ++ +LY LH++ + I +A Q A+ ++ LH++ IIHRD+
Sbjct: 90 T-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK--SIIHRDL 146
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN---LSTKT 235
KS N+ + + ++GDFGLA + + +G+I ++ P + + S ++
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 236 DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---LSVFDPRIPPPKDPIV 292
DV++FGI+L E+++ + + +S + D ++ +G + LS P
Sbjct: 207 DVYAFGIVLYELMTGQ----LPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP------- 255
Query: 293 RKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSK 326
K++ + C++ R+ RPS I+ + L++
Sbjct: 256 -KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 14/193 (7%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
+ +GKG G V RG +VAVK KN +Q E +++++ LV LLG +
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVK-CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 121 SKDRLLVV-EFMSNGTLYDVLHSNNRPLNWGR-RIRLALQVAKAVEILHSEMPPIIHRDI 178
K L +V E+M+ G+L D L S R + G ++ +L V +A+E L E +HRD+
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFVHRDL 128
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT--IGYLDPCYVTPDNLSTKTD 236
+ NVL+ + A++ DFGL ST G + + P + STK+D
Sbjct: 129 AARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 237 VFSFGILLLEIIS 249
V+SFGILL EI S
Sbjct: 182 VWSFGILLWEIYS 194
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEIL 103
+Y E + + LG G +G VY+ V + VAVK ++ +E E ++
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 270
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKA 162
+I P LV LLG ++ EFM+ G L D L NR ++ + +A Q++ A
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IG 219
+E L E IHR++ + N L+ N ++ DFGL+ D + T AG I
Sbjct: 331 MEYL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 384
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVD 265
+ P + + S K+DV++FG+LL EI + G SP +D
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID 424
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 33/259 (12%)
Query: 63 LGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
LG G +G VY V + VAVK ++ +E E ++ +I P LV LLG
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 121 SKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+V E+M G L D L NR + + +A Q++ A+E L E IHRD+
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL--EKKNFIHRDLA 157
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTPDNLSTKTD 236
+ N L+ N ++ DFGL+ D + T AG I + P + + S K+D
Sbjct: 158 ARNCLVGENHVVKVADFGLSRLMTGDTY----TAHAGAKFPIKWTAPESLAYNTFSIKSD 213
Query: 237 VFSFGILLLEIISCRKAIDIGFSPPSIVDWAA--PLIKKGKILSVFDPRIPPPKDPIVRK 294
V++FG+LL EI + G SP +D + L++KG + P PPK
Sbjct: 214 VWAFGVLLWEIAT------YGMSPYPGIDLSQVYDLLEKGYRME--QPEGCPPK------ 259
Query: 295 QLAVIAVRCVRSCRERRPS 313
+R+C + P+
Sbjct: 260 -----VYELMRACWKWSPA 273
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 14/193 (7%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
+ +GKG G V RG +VAVK KN +Q E +++++ LV LLG +
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKVAVK-CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 121 SKDRLLVV-EFMSNGTLYDVLHSNNRPLNWGR-RIRLALQVAKAVEILHSEMPPIIHRDI 178
K L +V E+M+ G+L D L S R + G ++ +L V +A+E L E +HRD+
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFVHRDL 134
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT--IGYLDPCYVTPDNLSTKTD 236
+ NVL+ + A++ DFGL ST G + + P + STK+D
Sbjct: 135 AARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 237 VFSFGILLLEIIS 249
V+SFGILL EI S
Sbjct: 188 VWSFGILLWEIYS 200
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 32/224 (14%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKK--------PSKNQEISQEVDNEIEI 102
A N +K +GKG G V+K L + VA+K ++ E QE E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 103 LSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
+S ++ P +V L G ++ +V+EF+ G LY L P+ W ++RL L +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 163 VEILHSEMPPIIHRDIKSANVL---IDRN--FNARLGDFGLALRCG------VDNFRFRS 211
+E + ++ PPI+HRD++S N+ +D N A++ DFGL+ + + NF++ +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMA 194
Query: 212 TPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAID 255
TIG + Y + K D +SF ++L I++ D
Sbjct: 195 ---PETIGAEEESY------TEKADTYSFAMILYTILTGEGPFD 229
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 10/205 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVK----KPSKNQEISQEVDNEIEILSKIHSPR 110
F LLGKGS VY+A + G +VA+K K + Q V NE++I ++ P
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L + DS LV+E NG + L + +P + Q+ + LHS
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH- 131
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
I+HRD+ +N+L+ RN N ++ DFGLA + + + + + GT Y+ P T
Sbjct: 132 -GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL--CGTPNYISPEIATRSA 188
Query: 231 LSTKTDVFSFGILLLEIISCRKAID 255
++DV+S G + ++ R D
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 63 LGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
LG G G VY+ V + VAVK ++ +E E ++ +I P LV LLG
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 121 SKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
++ EFM+ G L D L NR ++ + +A Q++ A+E L E IHRD+
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKNFIHRDLA 136
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTPDNLSTKTD 236
+ N L+ N ++ DFGL+ D T AG I + P + + S K+D
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLMTGDT----XTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 237 VFSFGILLLEIISCRKAIDIGFSPPSIVD 265
V++FG+LL EI + + G P + +
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 17/259 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
K LG G G V +G+ VAVK + E E + + K+ P+LV G +
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+V E++SNG L + L S+ + L + + + V + + L S IHRD+
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLA 131
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
+ N L+DR+ ++ DFG+ R +D+ S + + P S+K+DV++
Sbjct: 132 ARNCLVDRDLCVKVSDFGMT-RYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWA 190
Query: 240 FGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVI 299
FGIL+ E+ S +G P + + ++K + ++ P + D I + I
Sbjct: 191 FGILMWEVFS------LGKMPYDLYTNSEVVLKVSQGHRLYRPHL--ASDTIYQ-----I 237
Query: 300 AVRCVRSCRERRPSMKEIV 318
C E+RP+ ++++
Sbjct: 238 MYSCWHELPEKRPTFQQLL 256
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 63
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH++ + I +A Q A+ +
Sbjct: 64 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGM 121
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 122 DYLHAK--SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIEMVGRGSLSPDL 235
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSK 326
S P K++ + C++ R+ RPS I+ + L++
Sbjct: 236 SKVRSNCP--------KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 108/189 (57%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE-VDNEIEILSKIHSPRLVNLLGFSN 119
+G+G+ G+VY A V G++VA+++ + Q+ +E + NEI ++ + +P +VN L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+E+++ G+L DV+ ++ G+ + + +A+E LHS +IHRDIK
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIK 143
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S N+L+ + + +L DFG + + + RST GT ++ P VT K D++S
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSK-RST-MVGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 240 FGILLLEII 248
GI+ +E+I
Sbjct: 202 LGIMAIEMI 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 23/262 (8%)
Query: 60 QKLLGKGSHGSVYKAVL-RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFS 118
+K LG G G V+ A + +VAVK + E ++ + +LV L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNN---RPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ ++ EFM+ G+L D L S+ +PL + I + Q+A+ + + E IH
Sbjct: 253 T-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFI--EQRNYIH 307
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKT 235
RD+++AN+L+ + ++ DFGLA R DN I + P + + + K+
Sbjct: 308 RDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 236 DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQ 295
DV+SFGILL+EI++ + G S P ++ +++G R+P P++ ++
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIR----ALERGY-------RMPRPEN--CPEE 413
Query: 296 LAVIAVRCVRSCRERRPSMKEI 317
L I +RC ++ E RP+ + I
Sbjct: 414 LYNIMMRCWKNRPEERPTFEYI 435
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 32/224 (14%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKK--------PSKNQEISQEVDNEIEI 102
A N +K +GKG G V+K L + VA+K ++ E QE E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 103 LSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
+S ++ P +V L G ++ +V+EF+ G LY L P+ W ++RL L +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 163 VEILHSEMPPIIHRDIKSANVL---IDRN--FNARLGDFGLALRCG------VDNFRFRS 211
+E + ++ PPI+HRD++S N+ +D N A++ DFG + + + NF++ +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMA 194
Query: 212 TPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAID 255
TIG + Y + K D +SF ++L I++ D
Sbjct: 195 ---PETIGAEEESY------TEKADTYSFAMILYTILTGEGPFD 229
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 138/278 (49%), Gaps = 30/278 (10%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE-VDNEIEILSKIHSPRLVNLLGFSN 119
+G+G+ G+VY A V G++VA+++ + Q+ +E + NEI ++ + +P +VN L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+E+++ G+L DV+ ++ G+ + + +A+E LHS +IHRDIK
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIK 144
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S N+L+ + + +L DFG + + + + + GT ++ P VT K D++S
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 240 FGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK--DPIVRKQLA 297
GI+ +E+I PP + + PL I + P + P+ I R L
Sbjct: 203 LGIMAIEMIEGE--------PPYLNE--NPLRALYLIATNGTPELQNPEKLSAIFRDFLN 252
Query: 298 VIAVRCVRSCRERRPSMKEIVDW-----LTGLSKLVPL 330
RC+ E+R S KE++ LS L PL
Sbjct: 253 ----RCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPL 286
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 107/189 (56%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE-VDNEIEILSKIHSPRLVNLLGFSN 119
+G+G+ G+VY A V G++VA+++ + Q+ +E + NEI ++ + +P +VN L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+E+++ G+L DV+ ++ G+ + + +A+E LHS +IHRDIK
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIK 143
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S N+L+ + + +L DFG + + + + + GT ++ P VT K D++S
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPE--QSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 240 FGILLLEII 248
GI+ +E+I
Sbjct: 202 LGIMAIEMI 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 23/262 (8%)
Query: 60 QKLLGKGSHGSVYKAVL-RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFS 118
+K LG G G V+ A + +VAVK + E ++ + +LV L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNN---RPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ ++ EFM+ G+L D L S+ +PL + I + Q+A+ + + E IH
Sbjct: 80 T-KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFI--EQRNYIH 134
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKT 235
RD+++AN+L+ + ++ DFGLA R DN I + P + + + K+
Sbjct: 135 RDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 236 DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQ 295
DV+SFGILL+EI++ + G S P ++ +++G R+P P++ ++
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMSNPEVIR----ALERGY-------RMPRPEN--CPEE 240
Query: 296 LAVIAVRCVRSCRERRPSMKEI 317
L I +RC ++ E RP+ + I
Sbjct: 241 LYNIMMRCWKNRPEERPTFEYI 262
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 32/224 (14%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKK--------PSKNQEISQEVDNEIEI 102
A N +K +GKG G V+K L + VA+K ++ E QE E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 103 LSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
+S ++ P +V L G ++ +V+EF+ G LY L P+ W ++RL L +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 163 VEILHSEMPPIIHRDIKSANVL---IDRN--FNARLGDFGLALRCG------VDNFRFRS 211
+E + ++ PPI+HRD++S N+ +D N A++ DF L+ + + NF++ +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMA 194
Query: 212 TPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAID 255
TIG + Y + K D +SF ++L I++ D
Sbjct: 195 ---PETIGAEEESY------TEKADTYSFAMILYTILTGEGPFD 229
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 107/189 (56%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE-VDNEIEILSKIHSPRLVNLLGFSN 119
+G+G+ G+VY A V G++VA+++ + Q+ +E + NEI ++ + +P +VN L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+E+++ G+L DV+ ++ G+ + + +A+E LHS +IHRDIK
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIK 143
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S N+L+ + + +L DFG + + + + + GT ++ P VT K D++S
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 240 FGILLLEII 248
GI+ +E+I
Sbjct: 202 LGIMAIEMI 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 134/262 (51%), Gaps = 25/262 (9%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE-VDNEIEILSKIHSPRLVNLLGFSN 119
+G+G+ G+VY A V G++VA+++ + Q+ +E + NEI ++ + +P +VN L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+E+++ G+L DV+ ++ G+ + + +A+E LHS +IHR+IK
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ--VIHRNIK 144
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S N+L+ + + +L DFG + + + RST GT ++ P VT K D++S
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPEQSK-RST-MVGTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 240 FGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK--DPIVRKQLA 297
GI+ +E+I PP + + PL I + P + P+ I R L
Sbjct: 203 LGIMAIEMIEGE--------PPYLNE--NPLRALYLIATNGTPELQNPEKLSAIFRDFLN 252
Query: 298 VIAVRCVRSCRERRPSMKEIVD 319
RC+ E+R S KE++
Sbjct: 253 ----RCLEMDVEKRGSAKELIQ 270
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 33/262 (12%)
Query: 60 QKLLGKGSHGSVYKAVL-RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFS 118
+K LG G G V+ A + +VAVK + E ++ + +LV L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNN---RPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ ++ EFM+ G+L D L S+ +PL + I + Q+A+ + + E IH
Sbjct: 247 T-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFI--EQRNYIH 301
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKT 235
RD+++AN+L+ + ++ DFGLA R G F + T P + + + K+
Sbjct: 302 RDLRAANILVSASLVCKIADFGLA-RVGA-KFPIKWTAPEA---------INFGSFTIKS 350
Query: 236 DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQ 295
DV+SFGILL+EI++ + G S P ++ +++G R+P P++ ++
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMSNPEVIR----ALERGY-------RMPRPEN--CPEE 397
Query: 296 LAVIAVRCVRSCRERRPSMKEI 317
L I +RC ++ E RP+ + I
Sbjct: 398 LYNIMMRCWKNRPEERPTFEYI 419
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 7/187 (3%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
LG+GS+GSVYKA+ + G+ VA+K+ ++ QE+ EI I+ + SP +V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-QEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 121 SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ D +V+E+ G++ D++ N+ L + K +E LH IHRDIK+
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK--IHRDIKA 153
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
N+L++ +A+L DFG+A + + + + GT ++ P + + D++S
Sbjct: 154 GNILLNTEGHAKLADFGVAGQ--LTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211
Query: 241 GILLLEI 247
GI +E+
Sbjct: 212 GITAIEM 218
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 28/291 (9%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 3 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHRD+ + N+L++ ++GDFGL D F+ P
Sbjct: 121 SQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 235
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
++ VF + R+P P ++ +I C + +RPS +++
Sbjct: 236 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 87
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH + I +A Q A+ +
Sbjct: 88 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 146 DYLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDL 259
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
S P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 260 SKVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 303
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
F E +LG+G+ G V KA L R A+KK +E + +E+ +L+ ++ +V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 115 LG------------FSNDSKDRLLV-VEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAK 161
+ K L + +E+ NGTLYD++HS N RL Q+ +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA---------LRCGVDNFRFRST 212
A+ +HS+ IIHRD+K N+ ID + N ++GDFGLA L+ N S
Sbjct: 128 ALSYIHSQ--GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 213 PPAGTIGYLDPCYVTPDNL------STKTDVFSFGILLLEII 248
IG YV + L + K D++S GI+ E+I
Sbjct: 186 NLTSAIG--TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 22 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 79
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH + I +A Q A+ +
Sbjct: 80 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 137
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 138 DYLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDL 251
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
S P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 252 SKVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 295
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 48 SDLEAATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVK---KPSKNQEISQEVDNEIEI 102
+D + + QK +GKG+ V A VL GR+VAVK K N Q++ E+ I
Sbjct: 8 TDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRI 67
Query: 103 LSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
+ ++ P +V L K LV+E+ S G ++D L ++ R R + Q+ A
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSA 126
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNF--RFRSTPPAGTIGY 220
V+ H + I+HRD+K+ N+L+D + N ++ DFG + V N F +PP
Sbjct: 127 VQYCHQKY--IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPP------ 178
Query: 221 LDPCYVTPDNLSTK------TDVFSFGILLLEIIS 249
Y P+ K DV+S G++L ++S
Sbjct: 179 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 59
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH + I +A Q A+ +
Sbjct: 60 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 118 DYLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 175
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDL 231
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
S P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 232 SKVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 87
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH + I +A Q A+ +
Sbjct: 88 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 146 DYLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDL 259
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
S P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 260 SKVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 303
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 29 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 86
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH + I +A Q A+ +
Sbjct: 87 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 144
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 145 DYLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDL 258
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
S P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 259 SKVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 302
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 64
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH + I +A Q A+ +
Sbjct: 65 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 123 DYLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDL 236
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
S P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 237 SKVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 60 QKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF-S 118
Q+ +GKG G V++ RG +VAVK S +E S + EI + R N+LGF +
Sbjct: 14 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIA 70
Query: 119 NDSKDR------LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM-- 170
D+KD LV ++ +G+L+D L N + I+LAL A + LH E+
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 171 ----PPIIHRDIKSANVLIDRNFNARLGDFGLALR--CGVDNFRFRSTPPAGTIGYLDPC 224
P I HRD+KS N+L+ +N + D GLA+R D GT Y+ P
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP- 187
Query: 225 YVTPDNLSTK-------TDVFSFGILLLEI 247
V D+++ K D+++ G++ EI
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF--- 117
+ +GKG +G V++ + G VAVK S E Q E EI + + R N+LGF
Sbjct: 14 ECVGKGRYGEVWRGLWHGESVAVKIFSSRDE--QSWFRETEIYNTV-LLRHDNILGFIAS 70
Query: 118 ----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM--- 170
N S L+ + +G+LYD L + L +RLA+ A + LH E+
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFL--QRQTLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 171 ---PPIIHRDIKSANVLIDRNFNARLGDFGLAL--RCGVDNFRFRSTPPAGTIGYLDPCY 225
P I HRD KS NVL+ N + D GLA+ G D + P GT Y+ P
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP-E 187
Query: 226 VTPDNLSTK-------TDVFSFGILLLEI 247
V + + T TD+++FG++L EI
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 64
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH + I +A Q A+ +
Sbjct: 65 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 123 DYLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDL 236
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
S P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 237 SKVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 60 QKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF-S 118
Q+ +GKG G V++ RG +VAVK S +E S + EI + R N+LGF +
Sbjct: 11 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIA 67
Query: 119 NDSKDR------LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM-- 170
D+KD LV ++ +G+L+D L N + I+LAL A + LH E+
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 171 ----PPIIHRDIKSANVLIDRNFNARLGDFGLALR--CGVDNFRFRSTPPAGTIGYLDPC 224
P I HRD+KS N+L+ +N + D GLA+R D GT Y+ P
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP- 184
Query: 225 YVTPDNLSTK-------TDVFSFGILLLEI 247
V D+++ K D+++ G++ EI
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 60 QKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF-S 118
Q+ +GKG G V++ RG +VAVK S +E S + EI + R N+LGF +
Sbjct: 9 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIA 65
Query: 119 NDSKDR------LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM-- 170
D+KD LV ++ +G+L+D L N + I+LAL A + LH E+
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 171 ----PPIIHRDIKSANVLIDRNFNARLGDFGLALR--CGVDNFRFRSTPPAGTIGYLDPC 224
P I HRD+KS N+L+ +N + D GLA+R D GT Y+ P
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP- 182
Query: 225 YVTPDNLSTK-------TDVFSFGILLLEI 247
V D+++ K D+++ G++ EI
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 59
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH + I +A Q A+ +
Sbjct: 60 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 118 DYLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDL 231
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
S P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 232 SKVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 61
Query: 105 KIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
K ++ +G+S +K +L +V ++ +LY LH + I +A Q A+ +
Sbjct: 62 KTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 119
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 120 DYLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 177
Query: 224 CYVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---L 277
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + L
Sbjct: 178 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDL 233
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
S P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 234 SKVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 277
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 60 QKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF-S 118
Q+ +GKG G V++ RG +VAVK S +E S + EI + R N+LGF +
Sbjct: 8 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIA 64
Query: 119 NDSKDR------LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM-- 170
D+KD LV ++ +G+L+D L N + I+LAL A + LH E+
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 171 ----PPIIHRDIKSANVLIDRNFNARLGDFGLALR--CGVDNFRFRSTPPAGTIGYLDPC 224
P I HRD+KS N+L+ +N + D GLA+R D GT Y+ P
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP- 181
Query: 225 YVTPDNLSTK-------TDVFSFGILLLEI 247
V D+++ K D+++ G++ EI
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 26/274 (9%)
Query: 63 LGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV Y + G VAVKK +E ++ + EIEIL + +V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 116 G--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G +S ++ L++E++ G+L D L + ++ + ++ Q+ K +E L ++
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--Y 142
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT-IGYLDPCYVTPDNLS 232
IHRD+ + N+L++ ++GDFGL D + P + I + P +T S
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 202
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVF--------DPRI 284
+DV+SFG++L E+ + I+ SPP+ K+G+++ VF + R+
Sbjct: 203 VASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMI-VFHLIELLKNNGRL 258
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
P P ++ +I C + +RPS +++
Sbjct: 259 PRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 290
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 139/291 (47%), Gaps = 28/291 (9%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 4 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 61
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 121
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHR++ + N+L++ ++GDFGL D ++ P
Sbjct: 122 SQICKGMEYLGTKR--YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 179
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 180 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 236
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
++ VF + R+P P ++ +I C + +RPS +++
Sbjct: 237 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 284
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 60 QKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF-S 118
Q+ +GKG G V++ RG +VAVK S +E S + EI + R N+LGF +
Sbjct: 47 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIA 103
Query: 119 NDSKDR------LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM-- 170
D+KD LV ++ +G+L+D L N + I+LAL A + LH E+
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 171 ----PPIIHRDIKSANVLIDRNFNARLGDFGLALR--CGVDNFRFRSTPPAGTIGYLDPC 224
P I HRD+KS N+L+ +N + D GLA+R D GT Y+ P
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP- 220
Query: 225 YVTPDNLSTK-------TDVFSFGILLLEI 247
V D+++ K D+++ G++ EI
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 26/274 (9%)
Query: 63 LGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV Y + G VAVKK +E ++ + EIEIL + +V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 116 G--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G +S ++ L++E++ G+L D L + ++ + ++ Q+ K +E L ++
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--Y 153
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT-IGYLDPCYVTPDNLS 232
IHRD+ + N+L++ ++GDFGL D + P + I + P +T S
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVF--------DPRI 284
+DV+SFG++L E+ + I+ SPP+ K+G+++ VF + R+
Sbjct: 214 VASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMI-VFHLIELLKNNGRL 269
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
P P ++ +I C + +RPS +++
Sbjct: 270 PRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 301
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 60 QKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF-S 118
Q+ +GKG G V++ RG +VAVK S +E S + EI + R N+LGF +
Sbjct: 34 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIA 90
Query: 119 NDSKDR------LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM-- 170
D+KD LV ++ +G+L+D L N + I+LAL A + LH E+
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 171 ----PPIIHRDIKSANVLIDRNFNARLGDFGLALR--CGVDNFRFRSTPPAGTIGYLDPC 224
P I HRD+KS N+L+ +N + D GLA+R D GT Y+ P
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP- 207
Query: 225 YVTPDNLSTK-------TDVFSFGILLLEI 247
V D+++ K D+++ G++ EI
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 28/291 (9%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 8 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 65
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHRD+ + N+L++ ++GDFGL D + P
Sbjct: 126 SQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 240
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
++ VF + R+P P ++ +I C + +RPS +++
Sbjct: 241 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 288
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 28/291 (9%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 6 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 123
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHRD+ + N+L++ ++GDFGL D + P
Sbjct: 124 SQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 238
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
++ VF + R+P P ++ +I C + +RPS +++
Sbjct: 239 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 26/274 (9%)
Query: 63 LGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV Y + G VAVKK +E ++ + EIEIL + +V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 116 G--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G +S ++ L++E++ G+L D L + ++ + ++ Q+ K +E L ++
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--Y 166
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT-IGYLDPCYVTPDNLS 232
IHRD+ + N+L++ ++GDFGL D + P + I + P +T S
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 226
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVF--------DPRI 284
+DV+SFG++L E+ + I+ SPP+ K+G+++ VF + R+
Sbjct: 227 VASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMI-VFHLIELLKNNGRL 282
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
P P ++ +I C + +RPS +++
Sbjct: 283 PRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 314
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 28/291 (9%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 3 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHRD+ + N+L++ ++GDFGL D + P
Sbjct: 121 SQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 235
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
++ VF + R+P P ++ +I C + +RPS +++
Sbjct: 236 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 136/291 (46%), Gaps = 27/291 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG----RQVAVKKPSKNQEISQEVDNEIEILS 104
D E + + +G GS G+VYK G + + V P+ Q Q NE+ +L
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLR 59
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
K ++ +G+S + +V ++ +LY LH + I +A Q A+ ++
Sbjct: 60 KTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LH++ IIHRD+KS N+ + + ++GDFGLA + + +G+I ++ P
Sbjct: 119 YLHAK--SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 225 YVTPDN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI---LS 278
+ + S ++DV++FGI+L E+++ + + +S + D ++ +G + LS
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ----LPYSNINNRDQIIFMVGRGYLSPDLS 232
Query: 279 VFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
P K + + C++ R+ RP +I+ + L++ +P
Sbjct: 233 KVRSNCP--------KAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 28/291 (9%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 9 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 66
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 126
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHRD+ + N+L++ ++GDFGL D + P
Sbjct: 127 SQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 241
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
++ VF + R+P P ++ +I C + +RPS +++
Sbjct: 242 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 289
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 63 LGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV Y + G VAVKK +E ++ + EIEIL + +V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 116 G--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G +S ++ L++E++ G+L D L + ++ + ++ Q+ K +E L ++
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--Y 153
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT-IGYLDPCYVTPDNLS 232
IHRD+ + N+L++ ++GDFGL D + P + I + P +T S
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVF--------DPRI 284
+DV+SFG++L E+ + I+ SPP+ K+G+++ VF + R+
Sbjct: 214 VASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMI-VFHLIELLKNNGRL 269
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI 317
P P ++ +I C + +RPS +++
Sbjct: 270 PRPDG--CPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 28/290 (9%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 3 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHRD+ + N+L++ ++GDFGL D + P
Sbjct: 121 SQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 235
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI 317
++ VF + R+P P ++ +I C + +RPS +++
Sbjct: 236 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 28/290 (9%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 1 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 58
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 118
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHRD+ + N+L++ ++GDFGL D + P
Sbjct: 119 SQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 233
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI 317
++ VF + R+P P ++ +I C + +RPS +++
Sbjct: 234 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDL 280
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 32/306 (10%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 7 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 64
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHRD+ + N+L++ ++GDFGL D + P
Sbjct: 125 SQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 239
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI---VDWL-TG 323
++ VF + R+P P ++ +I C + +RPS +++ VD +
Sbjct: 240 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 296
Query: 324 LSKLVP 329
++ LVP
Sbjct: 297 MAGLVP 302
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 28/290 (9%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDN 98
D + E F +Q LGKG+ GSV Y + G VAVKK +E ++ +
Sbjct: 2 DPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 59
Query: 99 EIEILSKIHSPRLVNLLG--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
EIEIL + +V G +S ++ L++E++ G+L D L + ++ + ++
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q+ K +E L ++ IHRD+ + N+L++ ++GDFGL D + P
Sbjct: 120 SQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 217 T-IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGK 275
+ I + P +T S +DV+SFG++L E+ + I+ SPP+ K+G+
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQ 234
Query: 276 ILSVF--------DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI 317
++ VF + R+P P ++ +I C + +RPS +++
Sbjct: 235 MI-VFHLIELLKNNGRLPRPDG--CPDEIYMIMTECWNNNVNQRPSFRDL 281
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 63 LGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV Y + G VAVKK +E ++ + EIEIL + +V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 116 G--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G +S ++ L++E++ G+L D L ++ ++ + ++ Q+ K +E L ++
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR--Y 138
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT-IGYLDPCYVTPDNLS 232
IHRD+ + N+L++ ++GDFGL D + P + I + P +T S
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVF--------DPRI 284
+DV+SFG++L E+ + I+ SPP+ K+G+++ VF + R+
Sbjct: 199 VASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMI-VFHLIELLKNNGRL 254
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
P P ++ +I C + +RPS +++
Sbjct: 255 PRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 63 LGKGSHGSVYKAVLRGRQ----VAVKKPSKNQ----EISQEVDNEIEILSKIHSPRLVNL 114
LGKG G+VY A R RQ +A+K K Q + ++ E+EI S + P ++ L
Sbjct: 20 LGKGKFGNVYLA--RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPII 174
G+ +D+ L++E+ GT+Y L +R + R ++A A+ HS+ +I
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKR--VI 134
Query: 175 HRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK 234
HRDIK N+L+ N ++ DFG ++ R T GT+ YL P + K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 235 TDVFSFGILLLEII 248
D++S G+L E +
Sbjct: 191 VDLWSLGVLCYEFL 204
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 26/274 (9%)
Query: 63 LGKGSHGSV----YKAVL--RGRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV Y + G VAVKK +E ++ + EIEIL + +V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 116 G--FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G +S ++ L++EF+ G+L + L + ++ + ++ Q+ K +E L ++
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--Y 138
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT-IGYLDPCYVTPDNLS 232
IHRD+ + N+L++ ++GDFGL D + P + I + P +T S
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVF--------DPRI 284
+DV+SFG++L E+ + I+ SPP+ K+G+++ VF + R+
Sbjct: 199 VASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMI-VFHLIELLKNNGRL 254
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
P P ++ +I C + +RPS +++
Sbjct: 255 PRPDG--CPDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
F E +LG+G+ G V KA L R A+KK +E + +E+ +L+ ++ +V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 115 LG------------FSNDSKDRLLV-VEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAK 161
+ K L + +E+ N TLYD++HS N RL Q+ +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA---------LRCGVDNFRFRST 212
A+ +HS+ IIHRD+K N+ ID + N ++GDFGLA L+ N S
Sbjct: 128 ALSYIHSQ--GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 213 PPAGTIGYLDPCYVTPDNL------STKTDVFSFGILLLEII 248
IG YV + L + K D++S GI+ E+I
Sbjct: 186 NLTSAIG--TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D +R
Sbjct: 133 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR- 189
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 190 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 32/235 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D +R
Sbjct: 139 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR- 195
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFS 259
G G L +++P++L +T +DV+SFG++L EI + + G S
Sbjct: 196 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D +R
Sbjct: 130 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR- 186
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 187 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 241
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D +R
Sbjct: 132 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR- 188
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 189 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D +R
Sbjct: 126 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR- 182
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 183 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D +R
Sbjct: 129 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR- 185
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 186 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 240
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D +R
Sbjct: 132 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR- 188
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 189 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 32/235 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D +R
Sbjct: 139 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR- 195
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFS 259
G G L +++P++L +T +DV+SFG++L EI + + G S
Sbjct: 196 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 24/274 (8%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKP--------SKNQEISQEVDNEIEILSKIHSPRLV 112
K+LG G+ G+VYK + VK P + + + ++E+ +E +++ + SP +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
LLG S +L V + M G L D + N L + +Q+AK + L E
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYL--EDVR 139
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
++HRD+ + NVL+ + ++ DFGLA +D + + I ++ + +
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFT 199
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIV 292
++DV+S+G+ + E+++ G I D L++KG+ R+P P PI
Sbjct: 200 HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD----LLEKGE-------RLPQP--PIC 246
Query: 293 RKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSK 326
+ +I V+C E RP +E+V + +++
Sbjct: 247 TIDVYMIMVKCWMIDSECRPRFRELVSEFSRMAR 280
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D +R
Sbjct: 161 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR- 217
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 218 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 272
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 63 LGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
+G G G V+ L +VA+K + ++ E E++ K+ P+LV L G +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSA 181
LV EFM +G L D L + + + L V + + L E +IHRD+ +
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL--EEACVIHRDLAAR 135
Query: 182 NVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFG 241
N L+ N ++ DFG+ R +D+ ST + + P + S+K+DV+SFG
Sbjct: 136 NCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 194
Query: 242 ILLLEIIS 249
+L+ E+ S
Sbjct: 195 VLMWEVFS 202
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 63 LGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
+G G G V+ L +VA+K + ++ E E++ K+ P+LV L G +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSA 181
LV EFM +G L D L + + + L V + + L E +IHRD+ +
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL--EEASVIHRDLAAR 132
Query: 182 NVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFG 241
N L+ N ++ DFG+ R +D+ ST + + P + S+K+DV+SFG
Sbjct: 133 NCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 191
Query: 242 ILLLEIIS 249
+L+ E+ S
Sbjct: 192 VLMWEVFS 199
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 21/264 (7%)
Query: 61 KLLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
K LG G G V+ G +VA+K + E +I+ K+ +LV L +
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNN-RPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ + +V E+M+ G+L D L R L + +A QVA + + E IHRD+
Sbjct: 75 E-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI--ERMNYIHRDL 131
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVF 238
+SAN+L+ ++ DFGLA R DN I + P + K+DV+
Sbjct: 132 RSANILVGNGLICKIADFGLA-RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 239 SFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKD-PIVRKQLA 297
SFGILL E+++ + G + +++ +++G R+P P+D PI L
Sbjct: 191 SFGILLTELVTKGRVPYPGMNNREVLE----QVERGY-------RMPCPQDCPI---SLH 236
Query: 298 VIAVRCVRSCRERRPSMKEIVDWL 321
+ + C + E RP+ + + +L
Sbjct: 237 ELMIHCWKKDPEERPTFEYLQSFL 260
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 63 LGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
+G G G V+ L +VA+K + ++ E E++ K+ P+LV L G +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSA 181
LV EFM +G L D L + + + L V + + L E +IHRD+ +
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL--EEACVIHRDLAAR 133
Query: 182 NVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFG 241
N L+ N ++ DFG+ R +D+ ST + + P + S+K+DV+SFG
Sbjct: 134 NCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 192
Query: 242 ILLLEIIS 249
+L+ E+ S
Sbjct: 193 VLMWEVFS 200
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 61 KLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHSPRLVNLL 115
K +GKG+ V A +L G++VAVK K Q S Q++ E+ I+ ++ P +V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
K LV+E+ S G ++D L ++ R R + Q+ AV+ H + I+H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--IVH 136
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RD+K+ N+L+D + N ++ DFG + + F F + A P Y P+ K
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDAFCGA---PPYAAPELFQGKK 188
Query: 235 -----TDVFSFGILLLEIIS 249
DV+S G++L ++S
Sbjct: 189 YDGPEVDVWSLGVILYTLVS 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ KI +LV L ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE- 84
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 140 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 244
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 250
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGET-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 306 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 410
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 250
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGET-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 306 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 410
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 63 LGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
+G G G V+ L +VA+K + ++ E E++ K+ P+LV L G +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSA 181
LV EFM +G L D L + + + L V + + L E +IHRD+ +
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL--EEACVIHRDLAAR 130
Query: 182 NVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFG 241
N L+ N ++ DFG+ R +D+ ST + + P + S+K+DV+SFG
Sbjct: 131 NCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 189
Query: 242 ILLLEIIS 249
+L+ E+ S
Sbjct: 190 VLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 63 LGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
+G G G V+ L +VA+K + ++ E E++ K+ P+LV L G +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSA 181
LV EFM +G L D L + + + L V + + L E +IHRD+ +
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL--EEACVIHRDLAAR 132
Query: 182 NVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFG 241
N L+ N ++ DFG+ R +D+ ST + + P + S+K+DV+SFG
Sbjct: 133 NCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 191
Query: 242 ILLLEIIS 249
+L+ E+ S
Sbjct: 192 VLMWEVFS 199
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 333
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGET-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 389 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 448 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 493
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 494 HDLMCQCWRKEPEERPTFEYLQAFL 518
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V+E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 140 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 244
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V+E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 140 LRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 244
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 61 KLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHSPRLVNLL 115
K +GKG+ V A +L G++VAVK K Q S Q++ E+ I+ ++ P +V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
K LV+E+ S G ++D L ++ R R + Q+ AV+ H + I+H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--IVH 136
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNF--RFRSTPPAGTIGYLDPCYVTPDNLST 233
RD+K+ N+L+D + N ++ DFG + N F +PP Y P+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP----------YAAPELFQG 186
Query: 234 K------TDVFSFGILLLEIIS 249
K DV+S G++L ++S
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVS 208
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 51/298 (17%)
Query: 63 LGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEIS-QEVDNEIEILSKIHSPRLVNL 114
LG+G+ G V+ A VAVK + E + Q+ E E+L+ + +V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDVLHSNN--------------RPLNWGRRIRLALQVA 160
G + + L+V E+M +G L L S+ PL G+ + +A QVA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 161 KAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF--RSTPPAGT 217
+ L +HRD+ + N L+ + ++GDFG++ D +R R+ P
Sbjct: 169 AGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP--- 223
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKIL 277
I ++ P + +T++DV+SFG++L EI + K S +D I +G+ L
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID----CITQGREL 279
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRP----SMKEIVDWLTGLSKLVPLH 331
PR PP+ V A+ +R C +R P S+K++ L L++ P++
Sbjct: 280 E--RPRACPPE---------VYAI--MRGCWQREPQQRHSIKDVHARLQALAQAPPVY 324
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 77
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGET-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 133 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 192 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 237
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 238 HDLMCQCWRKEPEERPTFEYLQAFL 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 63 LGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
+G G G V+ L +VA+K + + E E++ K+ P+LV L G +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSA 181
LV EFM +G L D L + + + L V + + L E +IHRD+ +
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL--EEACVIHRDLAAR 152
Query: 182 NVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFG 241
N L+ N ++ DFG+ R +D+ ST + + P + S+K+DV+SFG
Sbjct: 153 NCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 211
Query: 242 ILLLEIIS 249
+L+ E+ S
Sbjct: 212 VLMWEVFS 219
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 61 KLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHSPRLVNLL 115
K +GKG+ V A +L G++VAVK K Q S Q++ E+ I+ ++ P +V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
K LV+E+ S G ++D L ++ R R + Q+ AV+ H + I+H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--IVH 136
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNF--RFRSTPPAGTIGYLDPCYVTPDNLST 233
RD+K+ N+L+D + N ++ DFG + N F +PP Y P+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP----------YAAPELFQG 186
Query: 234 K------TDVFSFGILLLEIIS 249
K DV+S G++L ++S
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVS 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 74
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGET-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 130 LRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 189 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 234
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 235 HDLMCQCWRKEPEERPTFEYLQAFL 259
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 17/194 (8%)
Query: 63 LGKGSHGSVYKAVLRGRQ----VAVKKPSKNQ----EISQEVDNEIEILSKIHSPRLVNL 114
LGKG G+VY A R RQ +A+K K Q + ++ E+EI S + P ++ L
Sbjct: 20 LGKGKFGNVYLA--RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPII 174
G+ +D+ L++E+ GT+Y L +R + R ++A A+ HS+ +I
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKR--VI 134
Query: 175 HRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK 234
HRDIK N+L+ N ++ DFG ++ R GT+ YL P + K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 235 TDVFSFGILLLEII 248
D++S G+L E +
Sbjct: 191 VDLWSLGVLCYEFL 204
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF 209
+ I++A ++A + L++ +HRD+ + N + +F ++GDFG+ D +R
Sbjct: 126 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR- 182
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 183 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 79 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 138 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 243
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 244 -PICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG-VDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D R
Sbjct: 124 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR- 180
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 181 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 235
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 32/240 (13%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEISQEVD--NE 99
+ E A + + LG+GS G VY+ V +G +VA+K ++ + + ++ NE
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 100 IEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NN---RPLNWG 150
++ + + +V LLG + + L+++E M+ G L L S NN P +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG-VDNFRF 209
+ I++A ++A + L++ +HRD+ + N ++ +F ++GDFG+ D R
Sbjct: 133 KMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR- 189
Query: 210 RSTPPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
G G L +++P++L +T +DV+SFG++L EI + + G S ++
Sbjct: 190 -----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 80 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 139 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 244
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 245 -PICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 81 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 140 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 245
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 246 -PICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 51/298 (17%)
Query: 63 LGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEIS-QEVDNEIEILSKIHSPRLVNL 114
LG+G+ G V+ A VAVK + E + Q+ E E+L+ + +V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDVLHSNN--------------RPLNWGRRIRLALQVA 160
G + + L+V E+M +G L L S+ PL G+ + +A QVA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 161 KAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF--RSTPPAGT 217
+ L +HRD+ + N L+ + ++GDFG++ D +R R+ P
Sbjct: 140 AGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP--- 194
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKIL 277
I ++ P + +T++DV+SFG++L EI + K S +D I +G+ L
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID----CITQGREL 250
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRP----SMKEIVDWLTGLSKLVPLH 331
PR PP+ V A+ +R C +R P S+K++ L L++ P++
Sbjct: 251 E--RPRACPPE---------VYAI--MRGCWQREPQQRHSIKDVHARLQALAQAPPVY 295
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 140 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 244
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 77 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 136 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 241
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 242 -PICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 78 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 137 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 242
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 243 -PICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 78 PHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 137 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 242
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 243 -PICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 61 KLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHSPRLVNLL 115
K +GKG+ V A +L G++VAV+ K Q S Q++ E+ I+ ++ P +V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
K LV+E+ S G ++D L ++ R R + Q+ AV+ H + I+H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--IVH 136
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNF--RFRSTPPAGTIGYLDPCYVTPDNLST 233
RD+K+ N+L+D + N ++ DFG + N F +PP Y P+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPP----------YAAPELFQG 186
Query: 234 K------TDVFSFGILLLEIIS 249
K DV+S G++L ++S
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVS 208
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 87
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + IHRD+++
Sbjct: 88 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRA 145
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 146 ANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 204
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 205 GILLTEIVTHGRIPYPGMTNPEVIQ 229
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 102 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 161 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 218
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 219 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 266
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 267 -PICTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 84 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 143 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 248
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 249 -PICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 29/266 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 122 KDRLLVV-EFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHR 176
++ + +V E+MS G+L D L G+ +RL V A +I + E +HR
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGET-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTD 236
D+++AN+L+ N ++ DFGLA R DN I + P + K+D
Sbjct: 305 DLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 237 VFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQ 295
V+SFGILL E+ + + G ++D +++G R+P PP+ P +
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ES 409
Query: 296 LAVIAVRCVRSCRERRPSMKEIVDWL 321
L + +C R E RP+ + + +L
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 74
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + E IHRD+++
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRA 132
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 133 ANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 191
Query: 241 GILLLEIISCRKAIDIGFSPPSIV 264
GILL EI++ + G + P ++
Sbjct: 192 GILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 80 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 139 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 244
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 245 -PICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 80
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + E IHRD+++
Sbjct: 81 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRA 138
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 139 ANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 197
Query: 241 GILLLEIISCRKAIDIGFSPPSIV 264
GILL EI++ + G + P ++
Sbjct: 198 GILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 140 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 244
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 89
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + E IHRD+++
Sbjct: 90 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRA 147
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 148 ANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 206
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 207 GILLTEIVTHGRIPYPGMTNPEVIQ 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 80 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 139 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 244
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 245 -PICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 79 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 138 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 243
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 244 -PICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 17/270 (6%)
Query: 47 YSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSK 105
Y E + K LG G G V RG+ VA+K + E E +++
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 75
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
+ +LV L G + ++ E+M+NG L + L + + + V +A+E
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
L S+ +HRD+ + N L++ ++ DFGL+ R +D+ S + + P
Sbjct: 136 LESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEETSSVGSKFPVRWSPPEV 192
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP 285
+ S+K+D+++FG+L+ EI S K F+ A I +G L ++ P +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQG--LRLYRPHLA 246
Query: 286 PPKDPIVRKQLAVIAVRCVRSCRERRPSMK 315
K + I C + RP+ K
Sbjct: 247 SEK-------VYTIMYSCWHEKADERPTFK 269
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 83 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 142 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 199
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 200 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 247
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 248 -PICTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 51/298 (17%)
Query: 63 LGKGSHGSVYKAVLRG-------RQVAVKKPSKNQEIS-QEVDNEIEILSKIHSPRLVNL 114
LG+G+ G V+ A VAVK + E + Q+ E E+L+ + +V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDVLHSNN--------------RPLNWGRRIRLALQVA 160
G + + L+V E+M +G L L S+ PL G+ + +A QVA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 161 KAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRF--RSTPPAGT 217
+ L +HRD+ + N L+ + ++GDFG++ D +R R+ P
Sbjct: 146 AGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP--- 200
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKIL 277
I ++ P + +T++DV+SFG++L EI + K S +D I +G+ L
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID----CITQGREL 256
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRP----SMKEIVDWLTGLSKLVPLH 331
PR PP+ V A+ +R C +R P S+K++ L L++ P++
Sbjct: 257 E--RPRACPPE---------VYAI--MRGCWQREPQQRHSIKDVHARLQALAQAPPVY 301
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 85
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + IHRD+++
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRA 143
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 144 ANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 203 GILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 81
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + E IHRD+++
Sbjct: 82 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRA 139
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 140 ANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 198
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 199 GILLTEIVTHGRIPYPGMTNPEVIQ 223
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V+E+MS G L D L G+ +RL V A +I + E +HRD
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 140 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 244
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 79
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + E IHRD+++
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRA 137
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 138 ANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 241 GILLLEIISCRKAIDIGFSPPSIV 264
GILL EI++ + G + P ++
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 85
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + E IHRD+++
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRA 143
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 144 ANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 203 GILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 84
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + E IHRD+++
Sbjct: 85 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRA 142
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 143 ANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 201
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 202 GILLTEIVTHGRIPYPGMTNPEVIQ 226
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 79
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + IHRD+++
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRA 137
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 138 ANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 73
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 129 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 188 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 233
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 234 HDLMCQCWRKDPEERPTFEYLQAFL 258
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 136 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 241
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 242 -PICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 88
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + IHRD+++
Sbjct: 89 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRA 146
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 147 ANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 205
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 206 GILLTEIVTHGRIPYPGMTNPEVIQ 230
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGRQ------VAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + R+ V K + + ++ E+EI S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 119
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 120 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 173
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFL 197
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 79
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + E IHRD+++
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRA 137
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 138 ANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 241 GILLLEIISCRKAIDIGFSPPSIV 264
GILL EI++ + G + P ++
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 75
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 131 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 190 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 235
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 236 HDLMCQCWRKDPEERPTFEYLQAFL 260
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 71 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 130 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 235
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 236 -PICTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 61 KLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHSPRLVNLL 115
K +GKG+ V A +L G++VAV+ K Q S Q++ E+ I+ ++ P +V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
K LV+E+ S G ++D L ++ R R + Q+ AV+ H + I+H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--IVH 136
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNF--RFRSTPPAGTIGYLDPCYVTPDNLST 233
RD+K+ N+L+D + N ++ DFG + N F +PP Y P+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP----------YAAPELFQG 186
Query: 234 K------TDVFSFGILLLEIIS 249
K DV+S G++L ++S
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVS 208
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 136 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 241
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 242 -PICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 17/270 (6%)
Query: 47 YSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSK 105
Y E + K LG G G V RG+ VA+K + E E +++
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 75
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
+ +LV L G + ++ E+M+NG L + L + + + V +A+E
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
L S+ +HRD+ + N L++ ++ DFGL+ R +D+ S + + P
Sbjct: 136 LESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEV 192
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP 285
+ S+K+D+++FG+L+ EI S K F+ A I +G L ++ P +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQG--LRLYRPHLA 246
Query: 286 PPKDPIVRKQLAVIAVRCVRSCRERRPSMK 315
K + I C + RP+ K
Sbjct: 247 SEK-------VYTIMYSCWHEKADERPTFK 269
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 13/211 (6%)
Query: 44 HFDYSDLEAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVD 97
H + + A F + LGKG G+VY A + +V K + + ++
Sbjct: 2 HXESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 98 NEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL 157
E+EI S + P ++ L G+ +D+ L++E+ GT+Y L ++ + R
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYIT 120
Query: 158 QVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT 217
++A A+ HS+ +IHRDIK N+L+ ++ DFG ++ R T GT
Sbjct: 121 ELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGT 174
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEII 248
+ YL P + K D++S G+L E +
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFL 205
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 17/270 (6%)
Query: 47 YSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSK 105
Y E + K LG G G V RG+ VA+K + E E +++
Sbjct: 7 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 66
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
+ +LV L G + ++ E+M+NG L + L + + + V +A+E
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
L S+ +HRD+ + N L++ ++ DFGL+ R +D+ S + + P
Sbjct: 127 LESK--QFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEV 183
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP 285
+ S+K+D+++FG+L+ EI S K F+ A I +G L ++ P +
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQG--LRLYRPHLA 237
Query: 286 PPKDPIVRKQLAVIAVRCVRSCRERRPSMK 315
K + I C + RP+ K
Sbjct: 238 SEK-------VYTIMYSCWHEKADERPTFK 260
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 138/313 (44%), Gaps = 45/313 (14%)
Query: 40 IKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVL------RGRQVAVKKPSKNQEIS 93
I +QH D+ ++ LG+G+ G V+ A + + + K K+ ++
Sbjct: 7 IHVQHIKRRDIVL-------KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA 59
Query: 94 --QEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHS--------- 142
++ E E+L+ + +V G D ++V E+M +G L L +
Sbjct: 60 ARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILV 119
Query: 143 NNRP------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDF 196
+ +P L + + +A Q+A + L S+ +HRD+ + N L+ N ++GDF
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDF 177
Query: 197 GLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDI 256
G++ ++ I ++ P + +T++DV+SFG++L EI + K
Sbjct: 178 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
Query: 257 GFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKE 316
S +++ I +G++L PR+ P K++ + + C + ++R ++KE
Sbjct: 238 QLSNTEVIE----CITQGRVLE--RPRVCP-------KEVYDVMLGCWQREPQQRLNIKE 284
Query: 317 IVDWLTGLSKLVP 329
I L L K P
Sbjct: 285 IYKILHALGKATP 297
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G L D L G+ +RL V A +I + E +HRD
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 140 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 244
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 48 SDLEAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIE 101
S + A F + LGKG G+VY A + +V K + + ++ E+E
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 102 ILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAK 161
I S + P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELAN 123
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
A+ HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL
Sbjct: 124 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYL 177
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEII 248
P + K D++S G+L E +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
K LG G G V RG+ VA+K + E E +++ + +LV L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ ++ E+M+NG L + L + + + V +A+E L S+ +HRD+
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK--QFLHRDLA 132
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
+ N L++ ++ DFGL+ R +D+ S + + P + S+K+D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 240 FGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVI 299
FG+L+ EI S K F+ A I +G L ++ P + K + I
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSE----TAEHIAQG--LRLYRPHLASEK-------VYTI 238
Query: 300 AVRCVRSCRERRPSMK 315
C + RP+ K
Sbjct: 239 MYSCWHEKADERPTFK 254
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 48 SDLEAATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVK---KPSKNQEISQEVDNEIEI 102
SD + + K +GKG+ V A +L GR+VA+K K N Q++ E+ I
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 103 LSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
+ ++ P +V L K L++E+ S G ++D L ++ R R + Q+ A
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSA 123
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA--LRCGVDNFRFRSTPPAGTIGY 220
V+ H + I+HRD+K+ N+L+D + N ++ DFG + G F +PP
Sbjct: 124 VQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP------ 175
Query: 221 LDPCYVTPDNLSTK------TDVFSFGILLLEIIS 249
Y P+ K DV+S G++L ++S
Sbjct: 176 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+ +AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 140 LAAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 244
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
K LG G G V RG+ VA+K + E E +++ + +LV L G
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ ++ E+M+NG L + L + + + V +A+E L S+ +HRD+
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK--QFLHRDLA 131
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
+ N L++ ++ DFGL+ R +D+ S + + P + S+K+D+++
Sbjct: 132 ARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 240 FGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVI 299
FG+L+ EI S K F+ A I +G L ++ P + K + I
Sbjct: 191 FGVLMWEIYSLGKMPYERFTNSE----TAEHIAQG--LRLYRPHLASEK-------VYTI 237
Query: 300 AVRCVRSCRERRPSMK 315
C + RP+ K
Sbjct: 238 MYSCWHEKADERPTFK 253
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 63 LGKGSHGSVYKAVL------RGRQVAVKKPSKNQEISQ-EVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV G VAVK+ + Q + EI+IL +HS +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 116 GFSNDS--KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G S + LV+E++ +G L D L + L+ R + + Q+ K +E L S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--C 148
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDPCYVTPDNLS 232
+HRD+ + N+L++ + ++ DFGLA +D ++ P I + P ++ + S
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 208
Query: 233 TKTDVFSFGILLLEIIS-CRKAI 254
++DV+SFG++L E+ + C K+
Sbjct: 209 RQSDVWSFGVVLYELFTYCDKSC 231
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 24/265 (9%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQ--------EVDNEIEILSKIHSPRLV 112
K+LG G+ G+VYK + VK P + +++ E +E I++ + P LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
LLG S LV + M +G L + +H + + + +Q+AK +++ E
Sbjct: 81 RLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG--MMYLEERR 137
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
++HRD+ + NVL+ + ++ DFGLA D + + I ++ + +
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 197
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIV 292
++DV+S+G+ + E+++ G I D L++KG+ R+P P PI
Sbjct: 198 HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD----LLEKGE-------RLPQP--PIC 244
Query: 293 RKQLAVIAVRCVRSCRERRPSMKEI 317
+ ++ V+C + RP KE+
Sbjct: 245 TIDVYMVMVKCWMIDADSRPKFKEL 269
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 63 LGKGSHGSVYKAVL------RGRQVAVKKPSKNQEISQ-EVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV G VAVK+ + Q + EI+IL +HS +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 116 GFSNDS--KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G S + LV+E++ +G L D L + L+ R + + Q+ K +E L S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--C 136
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDPCYVTPDNLS 232
+HRD+ + N+L++ + ++ DFGLA +D ++ P I + P ++ + S
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 196
Query: 233 TKTDVFSFGILLLEIIS-CRKAI 254
++DV+SFG++L E+ + C K+
Sbjct: 197 RQSDVWSFGVVLYELFTYCDKSC 219
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 123 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTLDYLPPE 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 123 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 63 LGKGSHGSVYKAVL------RGRQVAVKKPSKNQEISQ-EVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV G VAVK+ + Q + EI+IL +HS +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 116 GFSNDS--KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G S + LV+E++ +G L D L + L+ R + + Q+ K +E L S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--C 135
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDPCYVTPDNLS 232
+HRD+ + N+L++ + ++ DFGLA +D ++ P I + P ++ + S
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 195
Query: 233 TKTDVFSFGILLLEIIS-CRKAI 254
++DV+SFG++L E+ + C K+
Sbjct: 196 RQSDVWSFGVVLYELFTYCDKSC 218
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 125
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 126 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 179
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 251
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+MS G+L D L G+ +RL V A +I + E +HRD
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGL R DN I + P + K+DV
Sbjct: 307 LRAANILVGENLVCKVADFGLG-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 366 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 411
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 412 HDLMCQCWRKDPEERPTFEYLQAFL 436
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
K LG G G V RG+ VA+K + E E +++ + +LV L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ ++ E+M+NG L + L + + + V +A+E L S+ +HRD+
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK--QFLHRDLA 132
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
+ N L++ ++ DFGL+ R +D+ S + + P + S+K+D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 240 FGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVI 299
FG+L+ EI S K F+ A I +G L ++ P + K + I
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSE----TAEHIAQG--LRLYRPHLASEK-------VYTI 238
Query: 300 AVRCVRSCRERRPSMK 315
C + RP+ K
Sbjct: 239 MYSCWHEKADERPTFK 254
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 123 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTELCGTLDYLPPE 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF--- 117
K +GKG +G V+ RG +VAVK +E S + EI + R N+LGF
Sbjct: 43 KQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEI---YQTVLMRHENILGFIAA 99
Query: 118 ----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM--- 170
+ L+ ++ NG+LYD L S L+ ++LA + LH+E+
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 171 ---PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPP---AGTIGYLDPC 224
P I HRD+KS N+L+ +N + D GLA++ D PP GT Y+ P
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV-DIPPNTRVGTKRYMPP- 215
Query: 225 YVTPDNLS-------TKTDVFSFGILLLEI 247
V ++L+ D++SFG++L E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 121
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 122 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 175
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFL 199
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 54/291 (18%)
Query: 58 SEQKLLGKGSHGSVYKAVLR---GRQ---VAVKKPSKNQEISQEVD--NEIEILSKIHSP 109
+ QK++G G G VYK +L+ G++ VA+K Q VD E I+ +
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
++ L G + K +++ E+M NG L L + + + + + +A ++ L +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG--YLDPCYVT 227
+HRD+ + N+L++ N ++ DFGL+ R D+ T G I + P ++
Sbjct: 167 --NYVHRDLAARNILVNSNLVCKVSDFGLS-RVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 228 PDNLSTKTDVFSFGILLLEIIS-------------CRKAIDIGFSPPSIVDWAAPLIKKG 274
++ +DV+SFGI++ E+++ KAI+ GF
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF---------------- 267
Query: 275 KILSVFDPRIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
R+P P D P QL ++C + R RRP +IV L L
Sbjct: 268 --------RLPTPMDCPSAIYQL---MMQCWQQERARRPKFADIVSILDKL 307
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 127
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 128 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 181
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFL 205
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
K LG G G V RG+ VA+K + E E +++ + +LV L G
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ ++ E+M+NG L + L + + + V +A+E L S+ +HRD+
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK--QFLHRDLA 127
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
+ N L++ ++ DFGL+ R +D+ S + + P + S+K+D+++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 240 FGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVI 299
FG+L+ EI S K F+ A I +G L ++ P + K + I
Sbjct: 187 FGVLMWEIYSLGKMPYERFTNSE----TAEHIAQG--LRLYRPHLASEK-------VYTI 233
Query: 300 AVRCVRSCRERRPSMK 315
C + RP+ K
Sbjct: 234 MYSCWHEKADERPTFK 249
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 61 KLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHSPRLVNLL 115
K +GKG+ V A +L G++VAVK K Q S Q++ E+ I ++ P +V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
K LV E+ S G ++D L ++ R R + Q+ AV+ H + I+H
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF--IVH 136
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RD+K+ N+L+D + N ++ DFG + + F F + A P Y P+ K
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFS-----NEFTFGNKLDAFCGA---PPYAAPELFQGKK 188
Query: 235 -----TDVFSFGILLLEIIS 249
DV+S G++L ++S
Sbjct: 189 YDGPEVDVWSLGVILYTLVS 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 125
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 126 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 179
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+A+ + L
Sbjct: 74 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 133 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 191 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 238
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 239 -PICTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILSKI 106
A F + LGKG G+VY A + +V K + + ++ E+EI S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL 166
P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 167 HSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYV 226
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P +
Sbjct: 151 HSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMI 204
Query: 227 TPDNLSTKTDVFSFGILLLEII 248
K D++S G+L E +
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFL 226
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 123
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 124 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPE 177
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFL 201
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 123 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPE 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P E+ ++E+ +E +++ + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 111 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 170 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 228 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 275
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 276 -PICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 24/265 (9%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQ--------EVDNEIEILSKIHSPRLV 112
K+LG G+ G+VYK + VK P + +++ E +E I++ + P LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
LLG S LV + M +G L + +H + N G ++ L V A +++ E
Sbjct: 104 RLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEERR 160
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
++HRD+ + NVL+ + ++ DFGLA D + + I ++ + +
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 220
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIV 292
++DV+S+G+ + E+++ G I D L++KG+ R+P P PI
Sbjct: 221 HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD----LLEKGE-------RLPQP--PIC 267
Query: 293 RKQLAVIAVRCVRSCRERRPSMKEI 317
+ ++ V+C + RP KE+
Sbjct: 268 TIDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 127
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 128 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPE 181
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFL 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 63 LGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
LGKG G+VY A + +V K + + + ++ EIEI S + P ++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+ +D K L++EF G LY L + R + R ++A A+ H +IHR
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHERK--VIHR 138
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTD 236
DIK N+L+ ++ DFG ++ R GT+ YL P + K D
Sbjct: 139 DIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 237 VFSFGILLLEII-------------SCRKAIDIGFS-PPSIVDWAAPLIKK 273
++ G+L E + + R+ +++ PP + D + LI K
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISK 245
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 123 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPE 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 123
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG + R T +GT+ YL P
Sbjct: 124 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTTLSGTLDYLPPE 177
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFL 201
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 81
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+M+ G+L D L G+ +RL V + +I + E +HRD
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGET-----GKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 137 LRAANILVGENLVCKVADFGLA-RLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 241
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 242 HDLMCQCWRKEPEERPTFEYLQAFL 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 63 LGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
LGKG G+VY A + +V K + + + ++ EIEI S + P ++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+ +D K L++EF G LY L + R + R ++A A+ H +IHR
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHERK--VIHR 139
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTD 236
DIK N+L+ ++ DFG ++ R GT+ YL P + K D
Sbjct: 140 DIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPPEMIEGKTHDEKVD 195
Query: 237 VFSFGILLLEII-------------SCRKAIDIGFS-PPSIVDWAAPLIKK 273
++ G+L E + + R+ +++ PP + D + LI K
Sbjct: 196 LWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISK 246
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +DS L++E+ GT+Y L ++ + R ++A A+
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P
Sbjct: 123 YCHSKK--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPE 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 92
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 150
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D + G + ++ +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 259
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 260 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 126/266 (47%), Gaps = 24/266 (9%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQ--VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
F++ + +GKGS G V+K + Q VA+K + ++ +++ EI +LS+ SP +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G +++E++ G+ D+L PL+ + + ++ K ++ LHSE
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK- 140
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
IHRDIK+ANVL+ + +L DFG+A + + + + + GT ++ P +
Sbjct: 141 -IHRDIKAANVLLSEHGEVKLADFGVAGQ--LTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIV 292
+K D++S GI +E+ G P S + P+ K+L + PP +
Sbjct: 198 SKADIWSLGITAIELAR-------GEPPHSELH---PM----KVLFLIPKNNPPTLEGNY 243
Query: 293 RKQLAVIAVRCVRSCRERRPSMKEIV 318
K L C+ RP+ KE++
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELL 269
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG+G G V+ G +VA+K + E +++ K+ +LV L ++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 81
Query: 122 KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL----HSEMPPIIHRD 177
+ +V E+M+ G+L D L G+ +RL V + +I + E +HRD
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGET-----GKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
+++AN+L+ N ++ DFGLA R DN I + P + K+DV
Sbjct: 137 LRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 238 FSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP-PPKDPIVRKQL 296
+SFGILL E+ + + G ++D +++G R+P PP+ P + L
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLD----QVERGY-------RMPCPPECP---ESL 241
Query: 297 AVIAVRCVRSCRERRPSMKEIVDWL 321
+ +C R E RP+ + + +L
Sbjct: 242 HDLMCQCWRKEPEERPTFEYLQAFL 266
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 112
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 170
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D + G + ++ +
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 230 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 279
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 280 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 89
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 147
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D + G + ++ +
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 256
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 257 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 30/220 (13%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
F E +LG+G+ G V KA L R A+KK +E + +E+ +L+ ++ +V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 115 LG------------FSNDSKDRLLV-VEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAK 161
+ K L + E+ N TLYD++HS N RL Q+ +
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA--LRCGVDNFRFRSTPPAGTIG 219
A+ +HS+ IIHR++K N+ ID + N ++GDFGLA + +D + S G+
Sbjct: 128 ALSYIHSQ--GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 220 YLDPCYVTPDNLST-----------KTDVFSFGILLLEII 248
L T ++T K D +S GI+ E I
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 152
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D + G + ++ +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 261
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 262 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 26/202 (12%)
Query: 61 KLLGKGSHGSVYKA--VLRGRQVAVK---KPSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
K +GKG+ V A +L GR+VA+K K N Q++ E+ I+ ++ P +V L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
K L++E+ S G ++D L ++ R R + Q+ AV+ H + I+H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKR--IVH 137
Query: 176 RDIKSANVLIDRNFNARLGDFGLA--LRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
RD+K+ N+L+D + N ++ DFG + G F PP Y P+
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP----------YAAPELFQG 187
Query: 234 K------TDVFSFGILLLEIIS 249
K DV+S G++L ++S
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVS 209
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 55 NGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVD----NEIEILSKIHS 108
N F + ++LGKG G V +R G+ A KK K + ++ + NE +IL K++S
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 109 PRLVNLLGFSNDSKDRL-LVVEFMSNGTL-YDVLHSNNRPLNWGRRIRLALQVAKAVEIL 166
R V L ++ ++KD L LV+ M+ G L + + H R + A ++ +E L
Sbjct: 244 -RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302
Query: 167 HSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGV-DNFRFRSTPPAGTIGYLDPCY 225
H E I++RD+K N+L+D + + R+ D GLA+ + R GT+GY+ P
Sbjct: 303 HRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEV 356
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
V + + D ++ G LL E+I+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIA 380
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 61 KLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHSPRLVNLL 115
K +GKG+ V A +L G++VAVK K Q S Q++ E+ I+ ++ P +V L
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
K LV+E+ S G ++D L ++ R + Q+ AV+ H + I+H
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF--IVH 129
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNF--RFRSTPPAGTIGYLDPCYVTPDNLST 233
RD+K+ N+L+D + N ++ DFG + N F +PP Y P+
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP----------YAAPELFQG 179
Query: 234 K------TDVFSFGILLLEIIS 249
K DV+S G++L ++S
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVS 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 126/266 (47%), Gaps = 24/266 (9%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQ--VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
F++ + +GKGS G V+K + Q VA+K + ++ +++ EI +LS+ SP +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G +++E++ G+ D+L PL+ + + ++ K ++ LHSE
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK- 145
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
IHRDIK+ANVL+ + +L DFG+A + + + + + GT ++ P +
Sbjct: 146 -IHRDIKAANVLLSEHGEVKLADFGVAGQ--LTDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIV 292
+K D++S GI +E+ G P S + P+ K+L + PP +
Sbjct: 203 SKADIWSLGITAIELAR-------GEPPHSELH---PM----KVLFLIPKNNPPTLEGNY 248
Query: 293 RKQLAVIAVRCVRSCRERRPSMKEIV 318
K L C+ RP+ KE++
Sbjct: 249 SKPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILSKI 106
A F + LGKG G+VY A + +V K + + ++ E+EI S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL 166
P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 141
Query: 167 HSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYV 226
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P +
Sbjct: 142 HSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMI 195
Query: 227 TPDNLSTKTDVFSFGILLLEII 248
K D++S G+L E +
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFL 217
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ G +Y L ++ + R ++A A+
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALS 127
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R T GT+ YL P
Sbjct: 128 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 181
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFL 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 75
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + E IHR++++
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRNLRA 133
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R DN I + P + + K+DV+SF
Sbjct: 134 ANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 192
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 193 GILLTEIVTHGRIPYPGMTNPEVIQ 217
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 63 LGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
LGKG G+VY A + +V K + + + ++ EIEI S + P ++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+ +D K L++EF G LY L + R + R ++A A+ H +IHR
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHERK--VIHR 138
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTD 236
DIK N+L+ ++ DFG ++ R GT+ YL P + K D
Sbjct: 139 DIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 237 VFSFGILLLEII-------------SCRKAIDIGFS-PPSIVDWAAPLIKK 273
++ G+L E + + R+ +++ PP + D + LI K
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISK 245
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 126/266 (47%), Gaps = 24/266 (9%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQ--VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
F++ + +GKGS G V+K + Q VA+K + ++ +++ EI +LS+ SP +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G +++E++ G+ D+L PL+ + + ++ K ++ LHSE
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK- 125
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
IHRDIK+ANVL+ + +L DFG+A + + + + + GT ++ P +
Sbjct: 126 -IHRDIKAANVLLSEHGEVKLADFGVAGQ--LTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIV 292
+K D++S GI +E+ G P S + P+ K+L + PP +
Sbjct: 183 SKADIWSLGITAIELAR-------GEPPHSELH---PM----KVLFLIPKNNPPTLEGNY 228
Query: 293 RKQLAVIAVRCVRSCRERRPSMKEIV 318
K L C+ RP+ KE++
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 126/266 (47%), Gaps = 24/266 (9%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQ--VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
F++ + +GKGS G V+K + Q VA+K + ++ +++ EI +LS+ SP +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G +++E++ G+ D+L PL+ + + ++ K ++ LHSE
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK- 125
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
IHRDIK+ANVL+ + +L DFG+A + + + + + GT ++ P +
Sbjct: 126 -IHRDIKAANVLLSEHGEVKLADFGVAGQ--LTDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 233 TKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIV 292
+K D++S GI +E+ G P S + P+ K+L + PP +
Sbjct: 183 SKADIWSLGITAIELAR-------GEPPHSELH---PM----KVLFLIPKNNPPTLEGNY 228
Query: 293 RKQLAVIAVRCVRSCRERRPSMKEIV 318
K L C+ RP+ KE++
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 152
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D + G + ++ +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 261
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 262 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 91
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 149
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D + G + ++ +
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 209 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 258
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 259 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 55 NGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVD----NEIEILSKIHS 108
N F + ++LGKG G V +R G+ A KK K + ++ + NE +IL K++S
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 109 PRLVNLLGFSNDSKDRL-LVVEFMSNGTL-YDVLHSNNRPLNWGRRIRLALQVAKAVEIL 166
R V L ++ ++KD L LV+ M+ G L + + H R + A ++ +E L
Sbjct: 244 -RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302
Query: 167 HSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGV-DNFRFRSTPPAGTIGYLDPCY 225
H E I++RD+K N+L+D + + R+ D GLA+ + R GT+GY+ P
Sbjct: 303 HRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEV 356
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
V + + D ++ G LL E+I+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIA 380
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 93
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 151
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D + G + ++ +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 260
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 261 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+L G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 84 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 143 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 248
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 249 -PICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 86
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 144
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D + G + ++ +
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 204 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 253
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 254 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 79 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFG A G + + + I ++ +
Sbjct: 138 RR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 243
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 244 -PICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVLR---GRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 113
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 171
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D + G + ++ +
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 231 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 280
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 281 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+L G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 84 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 143 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 248
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 249 -PICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 84 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFG A G + + + I ++ +
Sbjct: 143 RR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 248
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 249 -PICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 37/222 (16%)
Query: 55 NGFSEQKLLGKGSHGSVYKAVLRG----RQVAVK--KPSKNQEISQEVDNEIEILSKI-H 107
N Q ++G+G+ G V KA ++ A+K K +++ ++ E+E+L K+ H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVL---------------HSNNRPLNWGRR 152
P ++NLLG L +E+ +G L D L +S L+ +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST 212
+ A VA+ ++ L + IHRD+ + N+L+ N+ A++ DFGL+ R +
Sbjct: 145 LHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGLS--------RGQEV 194
Query: 213 PPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIIS 249
T+G L ++ ++L +T +DV+S+G+LL EI+S
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 37/222 (16%)
Query: 55 NGFSEQKLLGKGSHGSVYKAVLRG----RQVAVK--KPSKNQEISQEVDNEIEILSKI-H 107
N Q ++G+G+ G V KA ++ A+K K +++ ++ E+E+L K+ H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVL---------------HSNNRPLNWGRR 152
P ++NLLG L +E+ +G L D L +S L+ +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST 212
+ A VA+ ++ L + IHRD+ + N+L+ N+ A++ DFGL+ R +
Sbjct: 135 LHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGLS--------RGQEV 184
Query: 213 PPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIIS 249
T+G L ++ ++L +T +DV+S+G+LL EI+S
Sbjct: 185 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+L G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 136 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 241
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 242 -PICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 95
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-- 153
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR--FRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + N ++D F ++ DFGLA F T + ++ +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRIP 285
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 214 KFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEYC 263
Query: 286 PPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 264 P--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 153
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-- 211
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR--FRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + N ++D F ++ DFGLA F T + ++ +
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRIP 285
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 272 KFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLL---QPEYC 321
Query: 286 PPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 322 P--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 80 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 139 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 244
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I +C + RP +E++
Sbjct: 245 -PICTIDVYMIMRKCWMIDADSRPKFRELI 273
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-- 152
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR--FRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + N ++D F ++ DFGLA F T + ++ +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRIP 285
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 213 KFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEYC 262
Query: 286 PPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 263 P--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P
Sbjct: 123 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPE 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 99
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-- 157
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR--FRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + N ++D F ++ DFGLA F T + ++ +
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRIP 285
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 218 KFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEYC 267
Query: 286 PPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 268 P--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 47/289 (16%)
Query: 61 KLLGKGSHGSVYKAV---LRGR----QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRL 111
K LG+G G V KA L+GR VAVK +N S+ D +E +L +++ P +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVL-----------------------HSNNRPLN 148
+ L G + LL+VE+ G+L L H + R L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 149 WGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR 208
G I A Q+++ ++ L +EM ++HRD+ + N+L+ ++ DFGL+ ++
Sbjct: 149 MGDLISFAWQISQGMQYL-AEM-KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 209 FRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAA 268
+ + + ++ + +T++DV+SFG+LL EI++ G P + +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN--- 263
Query: 269 PLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI 317
L+K G R+ P + +++ + ++C + ++RP +I
Sbjct: 264 -LLKTGH-------RMERPDN--CSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-- 152
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR--FRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + N ++D F ++ DFGLA F T + ++ +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRIP 285
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 213 KFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEYC 262
Query: 286 PPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 263 P--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 81 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFG A G + + + I ++ +
Sbjct: 140 RR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 245
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 246 -PICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 39/281 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 95
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-- 153
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS----TPPAGTIGYLDPCYVT 227
+HRD+ + N ++D F ++ DFGLA R +D F S T + ++ +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMLDK-EFDSVHNKTGAKLPVKWMALESLQ 211
Query: 228 PDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPR 283
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PE 261
Query: 284 IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 262 YCP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFG A G + + + I ++ +
Sbjct: 136 RR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 241
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I V+C + RP +E++
Sbjct: 242 -PICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 47/289 (16%)
Query: 61 KLLGKGSHGSVYKAV---LRGR----QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRL 111
K LG+G G V KA L+GR VAVK +N S+ D +E +L +++ P +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVL-----------------------HSNNRPLN 148
+ L G + LL+VE+ G+L L H + R L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 149 WGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR 208
G I A Q+++ ++ L +EM ++HRD+ + N+L+ ++ DFGL+ ++
Sbjct: 149 MGDLISFAWQISQGMQYL-AEM-SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 209 FRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAA 268
+ + + ++ + +T++DV+SFG+LL EI++ G P + +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN--- 263
Query: 269 PLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI 317
L+K G R+ P + +++ + ++C + ++RP +I
Sbjct: 264 -LLKTGH-------RMERPDN--CSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 92
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-- 150
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR--FRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + N ++D F ++ DFGLA F T + ++ +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRIP 285
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 211 KFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEYC 260
Query: 286 PPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 261 P--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 125
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P
Sbjct: 126 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPE 179
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 136 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 241
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I +C + RP +E++
Sbjct: 242 -PICTIDVYMIMRKCWMIDADSRPKFRELI 270
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 125
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ +FG ++ R T GT+ YL P
Sbjct: 126 YCHSKR--VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPE 179
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 47/289 (16%)
Query: 61 KLLGKGSHGSVYKAV---LRGR----QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRL 111
K LG+G G V KA L+GR VAVK +N S+ D +E +L +++ P +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVL-----------------------HSNNRPLN 148
+ L G + LL+VE+ G+L L H + R L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 149 WGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR 208
G I A Q+++ ++ L +EM ++HRD+ + N+L+ ++ DFGL+ ++
Sbjct: 149 MGDLISFAWQISQGMQYL-AEM-KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 209 FRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAA 268
+ + + ++ + +T++DV+SFG+LL EI++ G P + +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN--- 263
Query: 269 PLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI 317
L+K G R+ P + +++ + ++C + ++RP +I
Sbjct: 264 -LLKTGH-------RMERPDN--CSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 63 LGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS 121
LG G G V+ G +VAVK + E ++ ++ RLV L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 79
Query: 122 KDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
+ ++ E+M NG+L D L + + L + + +A Q+A+ + + IHRD+++
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRA 137
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
AN+L+ + ++ DFGLA R D I + P + + K+DV+SF
Sbjct: 138 ANILVSDTLSCKIADFGLA-RLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 241 GILLLEIISCRKAIDIGFSPPSIVD 265
GILL EI++ + G + P ++
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 31 PTQTVHEFAKELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E+M NG+L L ++ +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M +HRD+ + N+LI+ N ++ DFGLA R D+
Sbjct: 149 LVGMLRGIASGMKYL-SDMG-YVHRDLAARNILINSNLVCKVSDFGLA-RVLEDDPEAAY 205
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 253
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 254 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 13/203 (6%)
Query: 63 LGKGSHGSVYKAVL------RGRQVAVKKPSKNQEISQ-EVDNEIEILSKIHSPRLVNLL 115
LGKG+ GSV G VAVK+ + Q + EI+IL +HS +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 116 GFSNDS--KDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
G S + LV+E++ +G L D L + L+ R + + Q+ K +E L S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--C 132
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDPCYVTPDNLS 232
+HRD+ + N+L++ + ++ DFGLA +D + P I + P ++ + S
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFS 192
Query: 233 TKTDVFSFGILLLEIIS-CRKAI 254
++DV+SFG++L E+ + C K+
Sbjct: 193 RQSDVWSFGVVLYELFTYCDKSC 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 87 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFGLA G + + + I ++ +
Sbjct: 146 RR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 204 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 251
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I +C + RP +E++
Sbjct: 252 -PICTIDVYMIMRKCWMIDADSRPKFRELI 280
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%), Gaps = 30/220 (13%)
Query: 63 LGKGSHGSVYKA----VLRGR---QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRLVN 113
LG+GS G VY+ +++G +VAVK +++ + + ++ NE ++ +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NNR---PLNWGRRIRLALQVAKAVE 164
LLG + + L+V+E M++G L L S NN P I++A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
L+++ +HRD+ + N ++ +F ++GDFG+ R + +R G G L
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMT-RDIYETAYYRK----GGKGLLPVR 197
Query: 225 YVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFS 259
++ P++L +T +D++SFG++L EI S + G S
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 32/228 (14%)
Query: 63 LGKGSHGSVYKA----VLRGR---QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRLVN 113
LG+GS G VY+ +++G +VAVK +++ + + ++ NE ++ +V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NNR---PLNWGRRIRLALQVAKAVE 164
LLG + + L+V+E M++G L L S NN P I++A ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRFRSTPPAGTIGYLDP 223
L+++ +HRD+ + N ++ +F ++GDFG+ D +R G G L
Sbjct: 144 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR------KGGKGLLPV 195
Query: 224 CYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDW 266
++ P++L +T +D++SFG++L EI S + G S ++ +
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 243
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 122
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P
Sbjct: 123 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPE 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 124
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ +FG ++ R T GT+ YL P
Sbjct: 125 YCHSKR--VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPE 178
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFL 202
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 78 GRQVAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDR--LLVVEFMSN 133
G QVAVK KP ++ EIEIL ++ +V G + L++EF+ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 134 GTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARL 193
G+L + L N +N ++++ A+Q+ K ++ L S +HRD+ + NVL++ ++
Sbjct: 110 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKI 167
Query: 194 GDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
GDFGL A+ + + + Y C + +DV+SFG+ L E+++
Sbjct: 168 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ-SKFYIASDVWSFGVTLHELLT 224
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 125
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P
Sbjct: 126 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTLDYLPPE 179
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 78 GRQVAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDR--LLVVEFMSN 133
G QVAVK KP ++ EIEIL ++ +V G + L++EF+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 134 GTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARL 193
G+L + L N +N ++++ A+Q+ K ++ L S +HRD+ + NVL++ ++
Sbjct: 98 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKI 155
Query: 194 GDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
GDFGL A+ + + + Y C + +DV+SFG+ L E+++
Sbjct: 156 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC-LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 125
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P
Sbjct: 126 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPE 179
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 123
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P
Sbjct: 124 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDTLCGTLDYLPPE 177
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFL 201
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 57 FSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSKIHSPR 110
F + LG GS G V+ ++ GR A+K K + + ++E +LS + P
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ + G D++ ++++++ G L+ +L + R N + A +V A+E LHS+
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHSK- 125
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
II+RD+K N+L+D+N + ++ DFG A + TP Y+ P V+
Sbjct: 126 -DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTP-----DYIAPEVVSTKP 179
Query: 231 LSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
+ D +SFGIL+ E+++ G++P
Sbjct: 180 YNKSIDWWSFGILIYEMLA-------GYTP 202
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 32/221 (14%)
Query: 63 LGKGSHGSVYKA----VLRGR---QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRLVN 113
LG+GS G VY+ +++G +VAVK +++ + + ++ NE ++ +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NNR---PLNWGRRIRLALQVAKAVE 164
LLG + + L+V+E M++G L L S NN P I++A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRFRSTPPAGTIGYLDP 223
L+++ +HRD+ + N ++ +F ++GDFG+ D +R G G L
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR------KGGKGLLPV 196
Query: 224 CYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFS 259
++ P++L +T +D++SFG++L EI S + G S
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 124
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P
Sbjct: 125 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPE 178
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFL 202
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 54 TNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEISQEVDNE-----IEILSKI 106
++ + Q++LGKGS G V K + G++ AVK SK Q + Q+ D E +++L ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ-VKQKTDKESLLREVQLLKQL 89
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR--PLNWGRRIRLALQVAKAVE 164
P ++ L F D LV E + G L+D + S R ++ R IR QV +
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---QVLSGIT 146
Query: 165 ILHSEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
+H I+HRD+K N+L++ ++ N R+ DFGL+ + GT Y+
Sbjct: 147 YMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYI 201
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIIS 249
P V K DV+S G++L ++S
Sbjct: 202 AP-EVLHGTYDEKCDVWSTGVILYILLS 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 63 LGKGSHGSVY--KAVLRGRQVAVK----KPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
LG G+ G V K L G +VAVK + ++ ++ ++ EI+ L P ++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+ D +V+E++S G L+D + N R L+ RL Q+ V+ H M ++HR
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCHRHM--VVHR 140
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK-- 234
D+K NVL+D + NA++ DFGL+ F S G+ P Y P+ +S +
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGS-----PNYAAPEVISGRLY 192
Query: 235 ----TDVFSFGILLLEII 248
D++S G++L ++
Sbjct: 193 AGPEVDIWSSGVILYALL 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 31 PTQTVHEFAKELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E+M NG+L L ++ +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+
Sbjct: 149 LVGMLRGIASGMKYL-SDM-GYVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAY 205
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 253
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 254 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 31 PTQTVHEFAKELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E+M NG+L L ++ +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+
Sbjct: 149 LVGMLRGIASGMKYL-SDM-GYVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAY 205
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 253
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 254 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 31 PTQTVHEFAKELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E+M NG+L L ++ +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+
Sbjct: 149 LVGMLRGIASGMKYL-SDM-GYVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAY 205
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 253
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 254 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 31 PTQTVHEFAKELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E+M NG+L L ++ +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+
Sbjct: 149 LVGMLRGIASGMKYL-SDM-GFVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAY 205
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 253
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 254 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 57 FSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEISQEVDNE-----IEILSKIHSP 109
+ Q++LGKGS G V K + G++ AVK SK Q + Q+ D E +++L ++ P
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ-VKQKTDKESLLREVQLLKQLDHP 109
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR--PLNWGRRIRLALQVAKAVEILH 167
++ L F D LV E + G L+D + S R ++ R IR QV + +H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---QVLSGITYMH 166
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
I+HRD+K N+L++ ++ N R+ DFGL+ + GT Y+ P
Sbjct: 167 KN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAP- 220
Query: 225 YVTPDNLSTKTDVFSFGILLLEIIS 249
V K DV+S G++L ++S
Sbjct: 221 EVLHGTYDEKCDVWSTGVILYILLS 245
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILSKI 106
A F + LGKG G+VY A + +V K + + ++ E+EI S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL 166
P ++ L G+ +D+ L++E+ GT+Y L ++ + R ++A A+
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 167 HSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYV 226
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P +
Sbjct: 151 HSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTLDYLPPEMI 204
Query: 227 TPDNLSTKTDVFSFGILLLEII 248
K D++S G+L E +
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFL 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 57 FSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEISQEVDNE-----IEILSKIHSP 109
+ Q++LGKGS G V K + G++ AVK SK Q + Q+ D E +++L ++ P
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ-VKQKTDKESLLREVQLLKQLDHP 110
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR--PLNWGRRIRLALQVAKAVEILH 167
++ L F D LV E + G L+D + S R ++ R IR QV + +H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---QVLSGITYMH 167
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
I+HRD+K N+L++ ++ N R+ DFGL+ + GT Y+ P
Sbjct: 168 KN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAP- 221
Query: 225 YVTPDNLSTKTDVFSFGILLLEIIS 249
V K DV+S G++L ++S
Sbjct: 222 EVLHGTYDEKCDVWSTGVILYILLS 246
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 37/280 (13%)
Query: 61 KLLGKGSHGSVYKAVL---RGRQVAVKKPSKNQ-----EISQEVDNEIEILSKIHSPRLV 112
+++G+G G VY L G+++ S N+ E+SQ + I I+ P ++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 93
Query: 113 NLLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+LLG S+ L+V+ +M +G L + + + I LQVAK ++ L S+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-- 151
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT---IGYLDPCYVTP 228
+HRD+ + N ++D F ++ DFGLA R D G + ++ +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP----SIVDWAAPLIKKGKILSVFDPRI 284
+TK+DV+SFG+LL E+++ R A PP + D L++ ++L P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT-RGA------PPYPDVNTFDITVYLLQGRRLLQ---PEY 260
Query: 285 PPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P DP+ + ++C E RPS E+V ++ +
Sbjct: 261 CP--DPLYE-----VMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 136/302 (45%), Gaps = 36/302 (11%)
Query: 42 IQHFDYSDLEAATNGFSEQ---------KLLGKGSHGSVYKAVLR--GRQ---VAVKKPS 87
+ F + D A F+++ K++G G G V L+ G++ VA+K
Sbjct: 7 VDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 88 KNQEISQEVD--NEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR 145
Q D +E I+ + P +++L G K +++ E+M NG+L L N+
Sbjct: 67 AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG 126
Query: 146 PLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD 205
+ + + + ++ L S+M +HRD+ + N+L++ N ++ DFG++ R D
Sbjct: 127 RFTVIQLVGMLRGIGSGMKYL-SDMSA-VHRDLAARNILVNSNLVCKVSDFGMS-RVLED 183
Query: 206 NFRFRSTPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSI 263
+ T G I + P + ++ +DV+S+GI++ E++S + S +
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 243
Query: 264 VDWAAPLIKKGKILSVFDPRIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLT 322
+ I++G R+PPP D PI QL + C + R RP +IV+ L
Sbjct: 244 IK----AIEEGY-------RLPPPMDCPIALHQL---MLDCWQKERSDRPKFGQIVNMLD 289
Query: 323 GL 324
L
Sbjct: 290 KL 291
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQEISQEVDNEIEILSK 105
ATN S K++G G G V L+ VA+K K ++ ++ E I+ +
Sbjct: 32 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P ++ L G SK ++V E+M NG+L L ++ + + + +A ++
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG--YLDP 223
L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+ T G I + P
Sbjct: 151 L-SDM-GYVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP- 282
+ ++ +DV+S+GI+L E++S G P W + ++ D
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE---MSNQDVIKAVDEG 254
Query: 283 -RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
R+PPP D P QL + C + R RP ++IV L L
Sbjct: 255 YRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 54 TNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEISQEVDNE-----IEILSKI 106
++ + Q++LGKGS G V K + G++ AVK SK Q + Q+ D E +++L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ-VKQKTDKESLLREVQLLKQL 83
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR--PLNWGRRIRLALQVAKAVE 164
P ++ L F D LV E + G L+D + S R ++ R IR QV +
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---QVLSGIT 140
Query: 165 ILHSEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
+H I+HRD+K N+L++ ++ N R+ DFGL+ + GT Y+
Sbjct: 141 YMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYI 195
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIIS 249
P V K DV+S G++L ++S
Sbjct: 196 AP-EVLHGTYDEKCDVWSTGVILYILLS 222
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 29 PTQTVHEFAKELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 86
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E+M NG+L L ++ +
Sbjct: 87 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 146
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+
Sbjct: 147 LVGMLRGIASGMKYL-SDM-GYVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAY 203
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 204 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 251
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 252 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 31 PTQTVHEFAKELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E+M NG+L L ++ +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+
Sbjct: 149 LVGMLRGIASGMKYL-SDM-GYVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAY 205
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 253
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 254 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 61 KLLGKGSHGSVYKAVLR-GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
K LG G G V+ +VAVK Q E ++ + +LV L
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ ++ E+M+ G+L D L S+ + + I + Q+A+ + + E IHRD+
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI--ERKNYIHRDL 136
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVF 238
++ANVL+ + ++ DFGLA R DN I + P + + K+DV+
Sbjct: 137 RAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 239 SFGILLLEIISCRK 252
SFGILL EI++ K
Sbjct: 196 SFGILLYEIVTYGK 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEISQEVDNEIEILS 104
+ A F + LGKG G+VY A + +V K + + ++ E+EI S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ P ++ L G+ +D+ L++E+ G +Y L ++ + R ++A A+
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALS 127
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
HS+ +IHRDIK N+L+ ++ DFG ++ R GT+ YL P
Sbjct: 128 YCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLXGTLDYLPPE 181
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ K D++S G+L E +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFL 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 61 KLLGKGSHGSVYKAVLR-GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
K LG G G V+ +VAVK Q E ++ + +LV L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ ++ EFM+ G+L D L S+ + + I + Q+A+ + + E IHRD+
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI--ERKNYIHRDL 135
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVF 238
++ANVL+ + ++ DFGLA R DN I + P + + K++V+
Sbjct: 136 RAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 239 SFGILLLEIISCRK 252
SFGILL EI++ K
Sbjct: 195 SFGILLYEIVTYGK 208
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 14/198 (7%)
Query: 60 QKL--LGKGSHGSVYKAV-LRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVN 113
QKL +G+G++G VYKA +GR VA+K+ ++++ I EI +L ++H P +V+
Sbjct: 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL-QVAKAVEILHSEMPP 172
L+ + + LV EFM L VL N L +I++ L Q+ + V H
Sbjct: 84 LIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQ-DSQIKIYLYQLLRGVA--HCHQHR 139
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPDNL 231
I+HRD+K N+LI+ + +L DFGLA G+ + T T+ Y P +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKY 197
Query: 232 STKTDVFSFGILLLEIIS 249
ST D++S G + E+I+
Sbjct: 198 STSVDIWSIGCIFAEMIT 215
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 23/198 (11%)
Query: 63 LGKGSHGSVY--KAVLRGRQVAVK----KPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
LG G+ G V + L G +VAVK + ++ ++ ++ EI+ L P ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+ D +V+E++S G L+D + + R R RL Q+ AV+ H M ++HR
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM--VVHR 135
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK-- 234
D+K NVL+D + NA++ DFGL+ F R++ + P Y P+ +S +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEF-LRTSCGS-------PNYAAPEVISGRLY 187
Query: 235 ----TDVFSFGILLLEII 248
D++S G++L ++
Sbjct: 188 AGPEVDIWSCGVILYALL 205
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQ--VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
F++ +GKGS G VYK + + VA+K + ++ +++ EI +LS+ SP +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G S +++E++ G+ D+L PL + ++ K ++ LHSE
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPG--PLEETYIATILREILKGLDYLHSERK- 137
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
IHRDIK+ANVL+ + +L DFG+A + + + + GT ++ P +
Sbjct: 138 -IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 194
Query: 233 TKTDVFSFGILLLEI 247
K D++S GI +E+
Sbjct: 195 FKADIWSLGITAIEL 209
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQEISQEVDNEIEILSK 105
ATN S K++G G G V L+ VA+K K ++ ++ E I+ +
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P ++ L G SK ++V E+M NG+L L ++ + + + +A ++
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG--YLDP 223
L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+ T G I + P
Sbjct: 134 L-SDM-GYVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP- 282
+ ++ +DV+S+GI+L E++S G P W + ++ D
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE---MSNQDVIKAVDEG 237
Query: 283 -RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
R+PPP D P QL + C + R RP ++IV L L
Sbjct: 238 YRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 46/285 (16%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
F E +L+G G G V+KA R G+ +K+ N E + + E++ L+K+ +V+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE---KAEREVKALAKLDHVNIVHY 69
Query: 115 LG----FSND----------SKDRLLVV--EFMSNGTLYDVLHSN-NRPLNWGRRIRLAL 157
G F D SK + L + EF GTL + L+ + L
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 158 QVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT 217
Q+ K V+ +HS+ +I+RD+K +N+ + ++GDFGL D R RS GT
Sbjct: 130 QITKGVDYIHSK--KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KGT 184
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKIL 277
+ Y+ P ++ + + D+++ G++L E++ D F ++ G I
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSKFF----TDLRDGIIS 237
Query: 278 SVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLT 322
+FD K+ + + + E RP+ EI+ LT
Sbjct: 238 DIFD------------KKEKTLLQKLLSKKPEDRPNTSEILRTLT 270
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 14/198 (7%)
Query: 60 QKL--LGKGSHGSVYKAV-LRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVN 113
QKL +G+G++G VYKA +GR VA+K+ ++++ I EI +L ++H P +V+
Sbjct: 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL-QVAKAVEILHSEMPP 172
L+ + + LV EFM L VL N L +I++ L Q+ + V H
Sbjct: 84 LIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQ-DSQIKIYLYQLLRGVA--HCHQHR 139
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPDNL 231
I+HRD+K N+LI+ + +L DFGLA G+ + T T+ Y P +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKY 197
Query: 232 STKTDVFSFGILLLEIIS 249
ST D++S G + E+I+
Sbjct: 198 STSVDIWSIGCIFAEMIT 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 37/222 (16%)
Query: 55 NGFSEQKLLGKGSHGSVYKAVLRG----RQVAVK--KPSKNQEISQEVDNEIEILSKI-H 107
N Q ++G+G+ G V KA ++ A+K K +++ ++ E+E+L K+ H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVL---------------HSNNRPLNWGRR 152
P ++NLLG L +E+ +G L D L +S L+ +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST 212
+ A VA+ ++ L + IHR++ + N+L+ N+ A++ DFGL+ R +
Sbjct: 142 LHFAADVARGMDYLSQKQ--FIHRNLAARNILVGENYVAKIADFGLS--------RGQEV 191
Query: 213 PPAGTIGYLDPCYVTPDNL-----STKTDVFSFGILLLEIIS 249
T+G L ++ ++L +T +DV+S+G+LL EI+S
Sbjct: 192 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 31 PTQTVHEFAKELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E+M NG+L L ++ +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M +HRD+ + N+LI+ N ++ DFGL R D+
Sbjct: 149 LVGMLRGIASGMKYL-SDM-GYVHRDLAARNILINSNLVCKVSDFGLG-RVLEDDPEAAY 205
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 253
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 254 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 27/275 (9%)
Query: 60 QKLLGKGSHGSVYKAVLR--GRQ---VAVKKPSKNQEISQEVD--NEIEILSKIHSPRLV 112
+K++G G G V L+ G++ VA+K Q D +E I+ + P ++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
+L G K +++ E+M NG+L L N+ + + + + ++ L S+M
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL-SDM-S 130
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG--YLDPCYVTPDN 230
+HRD+ + N+L++ N ++ DFG++ R D+ T G I + P +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMS-RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 231 LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKD- 289
++ +DV+S+GI++ E++S + S ++ I++G R+PPP D
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK----AIEEGY-------RLPPPMDC 238
Query: 290 PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
PI QL + C + R RP +IV+ L L
Sbjct: 239 PIALHQL---MLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 23/198 (11%)
Query: 63 LGKGSHGSVY--KAVLRGRQVAVK----KPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
LG G+ G V + L G +VAVK + ++ ++ ++ EI+ L P ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+ D +V+E++S G L+D + + R R RL Q+ AV+ H M ++HR
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM--VVHR 135
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK-- 234
D+K NVL+D + NA++ DFGL+ F S P Y P+ +S +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCG--------SPNYAAPEVISGRLY 187
Query: 235 ----TDVFSFGILLLEII 248
D++S G++L ++
Sbjct: 188 AGPEVDIWSCGVILYALL 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 27/275 (9%)
Query: 60 QKLLGKGSHGSVYKAVLR--GRQ---VAVKKPSKNQEISQEVD--NEIEILSKIHSPRLV 112
+K++G G G V L+ G++ VA+K Q D +E I+ + P ++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
+L G K +++ E+M NG+L L N+ + + + + ++ L S+M
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL-SDM-S 136
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG--YLDPCYVTPDN 230
+HRD+ + N+L++ N ++ DFG++ R D+ T G I + P +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMS-RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 231 LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKD- 289
++ +DV+S+GI++ E++S + S ++ I++G R+PPP D
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK----AIEEGY-------RLPPPMDC 244
Query: 290 PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
PI QL + C + R RP +IV+ L L
Sbjct: 245 PIALHQL---MLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L +++ M G L D + + + + +Q+AK + L
Sbjct: 79 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFG A G + + + I ++ +
Sbjct: 138 RR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 243
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I +C + RP +E++
Sbjct: 244 -PICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 143/320 (44%), Gaps = 43/320 (13%)
Query: 40 IKIQHFDYSDLEAATNGFSEQ---------KLLGKGSHGSVYKAVLR--GRQ---VAVK- 84
I I F + D A F+++ +++G G G V L+ G++ VA+K
Sbjct: 9 IFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKT 68
Query: 85 -KPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSN 143
K ++ ++ +E I+ + P +++L G S +++ EFM NG+L L N
Sbjct: 69 LKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN 128
Query: 144 NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG 203
+ + + + +A ++ L ++M +HRD+ + N+L++ N ++ DFGL+
Sbjct: 129 DGQFTVIQLVGMLRGIAAGMKYL-ADM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
Query: 204 VDNFRFRSTPPAG---TIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
D T G I + P + ++ +DV+S+GI++ E++S + +
Sbjct: 187 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
Query: 261 PSIVDWAAPLIKKGKILSVFDPRIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
+++ I++ D R+PPP D P QL + C + R RP +IV+
Sbjct: 247 QDVIN----AIEQ-------DYRLPPPMDCPSALHQL---MLDCWQKDRNHRPKFGQIVN 292
Query: 320 WL-------TGLSKLVPLHS 332
L L + PL S
Sbjct: 293 TLDKMIRNPNSLKAMAPLSS 312
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 18/223 (8%)
Query: 42 IQHFDYSDLEAATNG---FSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEIS--- 93
++ + LEA G F + ++LG+G G V+ ++ G+ A KK +K +
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 94 -QEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTL----YDVLHSNNRPLN 148
Q E +IL+K+HS +V+L D LV+ M+ G + Y+V +N
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV-DEDNPGFQ 287
Query: 149 WGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR 208
R I Q+ +E LH II+RD+K NVL+D + N R+ D GLA+ +
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 209 FRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCR 251
+ AGT G++ P + + D F+ G+ L E+I+ R
Sbjct: 346 TKGY--AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF--- 117
+ +GKG +G V++ +G VAVK S E S + E L R N+LGF
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETE---LYNTVMLRHENILGFIAS 70
Query: 118 ----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM--- 170
+ S L+ + G+LYD L L+ +R+ L +A + LH E+
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 171 ---PPIIHRDIKSANVLIDRNFNARLGDFGLAL--RCGVDNFRFRSTPPAGTIGYLDP-- 223
P I HRD+KS N+L+ +N + D GLA+ + + P GT Y+ P
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 224 ----CYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIG----FSPP 261
V + + D+++FG++L E+ R+ + G + PP
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPP 232
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 32/221 (14%)
Query: 63 LGKGSHGSVYKA----VLRGR---QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRLVN 113
LG+GS G VY+ +++G +VAVK +++ + + ++ NE ++ +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NNR---PLNWGRRIRLALQVAKAVE 164
LLG + + L+V+E M++G L L S NN P I++A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG-VDNFRFRSTPPAGTIGYLDP 223
L+++ +HRD+ + N ++ +F ++GDFG+ D R G G L
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR------KGGKGLLPV 196
Query: 224 CYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFS 259
++ P++L +T +D++SFG++L EI S + G S
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 64 GKGSHGSVYKAVLRGRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDSK 122
+G G V+KA L VAVK P ++++ Q NE E+ S + + N+L F K
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQ---NEYEVYS-LPGMKHENILQFIGAEK 88
Query: 123 -------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP---- 171
D L+ F G+L D L +N ++W +A +A+ + LH ++P
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 172 ----PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVT 227
I HRDIKS NVL+ N A + DFGLAL+ + GT Y+ P +
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 228 -----PDNLSTKTDVFSFGILLLEIISCRKAID 255
+ + D+++ G++L E+ S A D
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 17/232 (7%)
Query: 63 LGKGSHGSVYKAVLRGRQ----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
LG G+ GSV + V R R+ VA+K K + ++E+ E +I+ ++ +P +V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
++ +LV+E G L+ L + L QV+ ++ L E +HR
Sbjct: 78 VCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL--EEKNFVHR 134
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT--IGYLDPCYVTPDNLSTK 234
D+ + NVL+ A++ DFGL+ G D+ + + AG + + P + S++
Sbjct: 135 DLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 235 TDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPP 286
+DV+S+G+ + E +S + P ++ I++GK + P PP
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVM----AFIEQGKRMEC-PPECPP 240
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF--- 117
+ +GKG +G V++ +G VAVK S E S + E L R N+LGF
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETE---LYNTVMLRHENILGFIAS 70
Query: 118 ----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM--- 170
+ S L+ + G+LYD L L+ +R+ L +A + LH E+
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 171 ---PPIIHRDIKSANVLIDRNFNARLGDFGLAL--RCGVDNFRFRSTPPAGTIGYLDP-- 223
P I HRD+KS N+L+ +N + D GLA+ + + P GT Y+ P
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 224 ----CYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIG----FSPP 261
V + + D+++FG++L E+ R+ + G + PP
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPP 232
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 32/226 (14%)
Query: 63 LGKGSHGSVYKA----VLRGR---QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRLVN 113
LG+GS G VY+ +++G +VAVK +++ + + ++ NE ++ +V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NNR---PLNWGRRIRLALQVAKAVE 164
LLG + + L+V+E M++G L L S NN P I++A ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG-VDNFRFRSTPPAGTIGYLDP 223
L+++ +HRD+ + N ++ +F ++GDFG+ D R G G L
Sbjct: 142 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR------KGGKGLLPV 193
Query: 224 CYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
++ P++L +T +D++SFG++L EI S + G S ++
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 239
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 32/221 (14%)
Query: 63 LGKGSHGSVYKA----VLRGR---QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRLVN 113
LG+GS G VY+ +++G +VAVK +++ + + ++ NE ++ +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NNR---PLNWGRRIRLALQVAKAVE 164
LLG + + L+V+E M++G L L S NN P I++A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG-VDNFRFRSTPPAGTIGYLDP 223
L+++ +HRD+ + N ++ +F ++GDFG+ D R G G L
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR------KGGKGLLPV 196
Query: 224 CYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFS 259
++ P++L +T +D++SFG++L EI S + G S
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGF--- 117
+ +GKG +G V++ +G VAVK S E S + E L R N+LGF
Sbjct: 43 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETE---LYNTVMLRHENILGFIAS 99
Query: 118 ----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM--- 170
+ S L+ + G+LYD L L+ +R+ L +A + LH E+
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 171 ---PPIIHRDIKSANVLIDRNFNARLGDFGLAL--RCGVDNFRFRSTPPAGTIGYLDP-- 223
P I HRD+KS N+L+ +N + D GLA+ + + P GT Y+ P
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 224 ----CYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIG----FSPP 261
V + + D+++FG++L E+ R+ + G + PP
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPP 261
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 18/223 (8%)
Query: 42 IQHFDYSDLEAATNG---FSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEIS--- 93
++ + LEA G F + ++LG+G G V+ ++ G+ A KK +K +
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 94 -QEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTL----YDVLHSNNRPLN 148
Q E +IL+K+HS +V+L D LV+ M+ G + Y+V +N
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV-DEDNPGFQ 287
Query: 149 WGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR 208
R I Q+ +E LH II+RD+K NVL+D + N R+ D GLA+ +
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 209 FRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCR 251
+ AGT G++ P + + D F+ G+ L E+I+ R
Sbjct: 346 TKGY--AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 42 IQHFDYSDLEAATNG---FSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEIS--- 93
++ + LEA G F + ++LG+G G V+ ++ G+ A KK +K +
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 94 -QEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNG-----TLYDVLHSNNRPL 147
Q E +IL+K+HS R + L ++ ++K L +V + NG +Y+V +N
Sbjct: 229 YQGAMVEKKILAKVHS-RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV-DEDNPGF 286
Query: 148 NWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNF 207
R I Q+ +E LH II+RD+K NVL+D + N R+ D GLA+
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 208 RFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCR 251
+ + AGT G++ P + + D F+ G+ L E+I+ R
Sbjct: 345 KTKGY--AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 18/223 (8%)
Query: 42 IQHFDYSDLEAATNG---FSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEIS--- 93
++ + LEA G F + ++LG+G G V+ ++ G+ A KK +K +
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 94 -QEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTL----YDVLHSNNRPLN 148
Q E +IL+K+HS +V+L D LV+ M+ G + Y+V +N
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV-DEDNPGFQ 287
Query: 149 WGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR 208
R I Q+ +E LH II+RD+K NVL+D + N R+ D GLA+ +
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 209 FRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCR 251
+ AGT G++ P + + D F+ G+ L E+I+ R
Sbjct: 346 TKGY--AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 124/270 (45%), Gaps = 24/270 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHS 108
F + K+LG G+ G+VYK + VK P +E+ ++E+ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P + LLG S +L + + M G L D + + + + +Q+AK + L
Sbjct: 79 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+ + NVL+ + ++ DFG A G + + + I ++ +
Sbjct: 138 RR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ ++DV+S+G+ + E+++ G I + +++KG+ R+P P
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----SSILEKGE-------RLPQP- 243
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PI + +I +C + RP +E++
Sbjct: 244 -PICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 32/221 (14%)
Query: 63 LGKGSHGSVYKA----VLRGR---QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRLVN 113
LG+GS G VY+ +++G +VAVK +++ + + ++ NE ++ +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NNR---PLNWGRRIRLALQVAKAVE 164
LLG + + L+V+E M++G L L S NN P I++A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRFRSTPPAGTIGYLDP 223
L+++ +HR++ + N ++ +F ++GDFG+ D +R G G L
Sbjct: 145 YLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR------KGGKGLLPV 196
Query: 224 CYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFS 259
++ P++L +T +D++SFG++L EI S + G S
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 32/221 (14%)
Query: 63 LGKGSHGSVYKA----VLRGR---QVAVKKPSKNQEISQEVD--NEIEILSKIHSPRLVN 113
LG+GS G VY+ +++G +VAVK +++ + + ++ NE ++ +V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHS------NNR---PLNWGRRIRLALQVAKAVE 164
LLG + + L+V+E M++G L L S NN P I++A ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC-GVDNFRFRSTPPAGTIGYLDP 223
L+++ +HR++ + N ++ +F ++GDFG+ D +R G G L
Sbjct: 146 YLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR------KGGKGLLPV 197
Query: 224 CYVTPDNL-----STKTDVFSFGILLLEIISCRKAIDIGFS 259
++ P++L +T +D++SFG++L EI S + G S
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 238
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 39/293 (13%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGR-------QVAVK--KPSKNQEISQEVDNEIE 101
E N K LG G+ G V +A G +VAVK K + + + + + +E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH---------SNNRPLNWGR 151
I+S + +VNLLG L++ E+ G L + L + RPL
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + QVA+ + L S+ IHRD+ + NVL+ A++GDFGLA D+
Sbjct: 162 LLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 212 TPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSIV--DWAA 268
+ ++ P + + ++DV+S+GILL EI S +G +P P I+
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGILVNSKFY 273
Query: 269 PLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
L+K G ++ P P K + I C RP+ ++I +L
Sbjct: 274 KLVKDGYQMA--QPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 39/293 (13%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGR-------QVAVK--KPSKNQEISQEVDNEIE 101
E N K LG G+ G V +A G +VAVK K + + + + + +E++
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH---------SNNRPLNWGR 151
I+S + +VNLLG L++ E+ G L + L + RPL
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 153
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + QVA+ + L S+ IHRD+ + NVL+ A++GDFGLA D+
Sbjct: 154 LLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 212 TPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSIV--DWAA 268
+ ++ P + + ++DV+S+GILL EI S +G +P P I+
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGILVNSKFY 265
Query: 269 PLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
L+K G ++ P P K + I C RP+ ++I +L
Sbjct: 266 KLVKDGYQMA--QPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 57 FSEQKLLGKGSHGSVYKAV-LRGRQVAVKKP---SKNQEISQEVDNEIEILSKIHSPRLV 112
F++ + +GKGS G V+K + R +QV K + ++ +++ EI +LS+ S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G +++E++ G+ D+L + P + + + ++ K ++ LHSE
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEKK- 141
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
IHRDIK+ANVL+ + +L DFG+A + + + + + GT ++ P +
Sbjct: 142 -IHRDIKAANVLLSEQGDVKLADFGVAGQ--LTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 233 TKTDVFSFGILLLEI 247
+K D++S GI +E+
Sbjct: 199 SKADIWSLGITAIEL 213
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 31 PTQTVHEFAKELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E M NG+L L ++ +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ 148
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+
Sbjct: 149 LVGMLRGIASGMKYL-SDMG-YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAY 205
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 253
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 254 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 103/189 (54%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPS-KNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
+G+GS G V A + G+QVAVKK + Q+ + + NE+ I+ H +V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+EF+ G L D++ ++ R +N + + L V +A+ LH++ +IHRDIK
Sbjct: 113 VGDELWVVMEFLEGGALTDIV-THTR-MNEEQIATVCLSVLRALSYLHNQ--GVIHRDIK 168
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S ++L+ + +L DFG + + + + GT ++ P ++ T+ D++S
Sbjct: 169 SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL--VGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 240 FGILLLEII 248
GI+++E+I
Sbjct: 227 LGIMVIEMI 235
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 10/192 (5%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQ-EVDNEIEILSKIHSPRLVNLLGFSN 119
LG G+ G V++ V + GR K + + + V NEI I++++H P+L+NL
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
D + +L++EF+S G L+D + + + ++ I Q + ++ +H I+H DIK
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH--SIVHLDIK 176
Query: 180 SANVLID--RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDV 237
N++ + + + ++ DFGLA + D +T T + P V + + TD+
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYTDM 233
Query: 238 FSFGILLLEIIS 249
++ G+L ++S
Sbjct: 234 WAIGVLGYVLLS 245
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
LG G+ G VYKA + G A K +K++E ++ EIEIL+ P +V LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+++EF G + ++ +R L + + Q+ +A+ LHS+ IIHRD+K
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLK 144
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP----CYVTPDN-LSTK 234
+ NVL+ + RL DFG++ + + + R + GT ++ P C D K
Sbjct: 145 AGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDS-FIGTPYWMAPEVVMCETMKDTPYDYK 202
Query: 235 TDVFSFGILLLEI 247
D++S GI L+E+
Sbjct: 203 ADIWSLGITLIEM 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 33/298 (11%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQE 91
P + H +L+A S K++G G G V L+ VA+K K ++
Sbjct: 31 PTQTVHEFAKELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 92 ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR 151
++ E I+ + P ++ L G SK ++V E M NG+L L ++ +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ 148
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ + +A ++ L S+M + HRD+ + N+LI+ N ++ DFGL+ R D+
Sbjct: 149 LVGMLRGIASGMKYL-SDMGAV-HRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAY 205
Query: 212 TPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAP 269
T G I + P + ++ +DV+S+GI+L E++S G P W
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE-- 253
Query: 270 LIKKGKILSVFDP--RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+ ++ D R+PPP D P QL + C + R RP ++IV L L
Sbjct: 254 -MSNQDVIKAVDEGYRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
LG G+ G VYKA + G A K +K++E ++ EIEIL+ P +V LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+++EF G + ++ +R L + + Q+ +A+ LHS+ IIHRD+K
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLK 136
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP----CYVTPDN-LSTK 234
+ NVL+ + RL DFG++ + + + R + GT ++ P C D K
Sbjct: 137 AGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDS-FIGTPYWMAPEVVMCETMKDTPYDYK 194
Query: 235 TDVFSFGILLLEI 247
D++S GI L+E+
Sbjct: 195 ADIWSLGITLIEM 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 32/284 (11%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKAVLR-----GRQVAVK--KPSKNQEISQEVDNEIEILSK 105
ATN S K++G G G V L+ VA+K K ++ ++ E I+ +
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P ++ L G SK ++V E M NG+L L ++ + + + +A ++
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG--YLDP 223
L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+ T G I + P
Sbjct: 134 L-SDMG-YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP- 282
+ ++ +DV+S+GI+L E++S G P W + ++ D
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMS------YGERPY----WE---MSNQDVIKAVDEG 237
Query: 283 -RIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
R+PPP D P QL + C + R RP ++IV L L
Sbjct: 238 YRLPPPMDCPAALYQL---MLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 54 TNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEISQEVDNE-----IEILSKI 106
++ + Q++LGKGS G V K + G++ AVK SK Q + Q+ D E +++L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ-VKQKTDKESLLREVQLLKQL 83
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR--PLNWGRRIRLALQVAKAVE 164
P + L F D LV E + G L+D + S R ++ R IR QV +
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---QVLSGIT 140
Query: 165 ILHSEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
H I+HRD+K N+L++ ++ N R+ DFGL+ + GT Y+
Sbjct: 141 YXHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---KXKDKIGTAYYI 195
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIIS 249
P V K DV+S G++L ++S
Sbjct: 196 AP-EVLHGTYDEKCDVWSTGVILYILLS 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G VAVK K +E ++ +E+E++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ ++T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 272
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 273 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 137/297 (46%), Gaps = 36/297 (12%)
Query: 47 YSDLEAATNGFSEQ---------KLLGKGSHGSVYKAVLR--GRQ---VAVK--KPSKNQ 90
Y D A + F+++ +++G G G V L+ G++ VA+K K +
Sbjct: 5 YEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTE 64
Query: 91 EISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWG 150
+ ++ E I+ + P +++L G SK ++V E+M NG+L L N+
Sbjct: 65 KQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI 124
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFR 210
+ + + ++ ++ L S+M +HRD+ + N+LI+ N ++ DFGL+ R D+
Sbjct: 125 QLVGMLRGISAGMKYL-SDM-GYVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPEAA 181
Query: 211 STPPAGTIG--YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAA 268
T G I + P + ++ +DV+S+GI++ E++S + + ++
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIK--- 238
Query: 269 PLIKKGKILSVFDPRIPPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+++G R+P P D P QL + C + R RP EIV+ L L
Sbjct: 239 -AVEEGY-------RLPSPMDCPAALYQL---MLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G +VAVK K ++ ++ +E+E++ I
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P L+ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
A QVA+ +E L S+ IHRD+ + NVL+ + ++ DFGLA ++ ++T
Sbjct: 154 SCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+LL EI + +G SP P + V+ L+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLL 265
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
K+G R+ P + +L ++ C + +RP+ K++V+ L ++V L
Sbjct: 266 KEGH-------RMDKPSN--CTNELYMMMRDCWHAVPSQRPTFKQLVE---DLDRIVALT 313
Query: 332 S 332
S
Sbjct: 314 S 314
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N R+ DFGLA ++ ++T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 272
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 273 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G +VAVK K ++ ++ +E+E++ I
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTL---------------YDVLHSNNRPLNWGRRI 153
+ ++NLLG ++VE+ S G L Y+ H+ L+ +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
A QVA+ +E L S+ IHRD+ + NVL+ + ++ DFGLA ++ ++T
Sbjct: 195 SCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+LL EI + +G SP P + V+ L+
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLL 306
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
K+G R+ P + +L ++ C + +RP+ K++V+ L ++V L
Sbjct: 307 KEGH-------RMDKPSN--CTNELYMMMRDCWHAVPSQRPTFKQLVE---DLDRIVALT 354
Query: 332 S 332
S
Sbjct: 355 S 355
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G +VAVK K ++ ++ +E+E++ I
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P L+ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
A QVA+ +E L S+ IHRD+ + NVL+ + ++ DFGLA ++ ++T
Sbjct: 154 SCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+LL EI + +G SP P + V+ L+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLL 265
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
K+G R+ P + +L ++ C + +RP+ K++V+ L ++V L
Sbjct: 266 KEGH-------RMDKPSN--CTNELYMMMRDCWHAVPSQRPTFKQLVE---DLDRIVALT 313
Query: 332 S 332
S
Sbjct: 314 S 314
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G +VAVK K ++ ++ +E+E++ I
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P L+ +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
A QVA+ +E L S+ IHRD+ + NVL+ + ++ DFGLA ++ ++T
Sbjct: 146 SCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+LL EI + +G SP P + V+ L+
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLL 257
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
K+G R+ P + +L ++ C + +RP+ K++V+ L ++V L
Sbjct: 258 KEGH-------RMDKPSN--CTNELYMMMRDCWHAVPSQRPTFKQLVE---DLDRIVALT 305
Query: 332 S 332
S
Sbjct: 306 S 306
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 30/211 (14%)
Query: 63 LGKGSHGS--VYKAVLRGRQVAVKKPSKNQEISQEVDN---EIEILSKIHSPRLVNLLGF 117
+G+GS G + K+ GRQ +K+ + ++ S+E + E+ +L+ + P +V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 118 SNDSKDRLLVVEFMSNGTLYD-------VLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ +V+++ G L+ VL ++ L+W +I LAL+ H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK--------HVHD 143
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLA--LRCGVDNFRFRSTPPAGTIGYLDP--CYV 226
I+HRDIKS N+ + ++ +LGDFG+A L V+ R GT YL P C
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR----ACIGTPYYLSPEICEN 199
Query: 227 TPDNLSTKTDVFSFGILLLEIISCRKAIDIG 257
P N K+D+++ G +L E+ + + A + G
Sbjct: 200 KPYN--NKSDIWALGCVLYELCTLKHAFEAG 228
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G +VAVK K ++ ++ +E+E++ I
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P L+ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
A QVA+ +E L S+ IHRD+ + NVL+ + ++ DFGLA ++ ++T
Sbjct: 154 SCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+LL EI + +G SP P + V+ L+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLL 265
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
K+G R+ P + +L ++ C + +RP+ K++V+ L ++V L
Sbjct: 266 KEGH-------RMDKPSN--CTNELYMMMRDCWHAVPSQRPTFKQLVE---DLDRIVALT 313
Query: 332 S 332
S
Sbjct: 314 S 314
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G +VAVK K ++ ++ +E+E++ I
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P L+ +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
A QVA+ +E L S+ IHRD+ + NVL+ + ++ DFGLA ++ ++T
Sbjct: 143 SCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+LL EI + +G SP P + V+ L+
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLL 254
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
K+G R+ P + +L ++ C + +RP+ K++V+ L ++V L
Sbjct: 255 KEGH-------RMDKPSN--CTNELYMMMRDCWHAVPSQRPTFKQLVE---DLDRIVALT 302
Query: 332 S 332
S
Sbjct: 303 S 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G +VAVK K ++ ++ +E+E++ I
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P L+ +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
A QVA+ +E L S+ IHRD+ + NVL+ + ++ DFGLA ++ ++T
Sbjct: 147 SCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+LL EI + +G SP P + V+ L+
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLL 258
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
K+G R+ P + +L ++ C + +RP+ K++V+ L ++V L
Sbjct: 259 KEGH-------RMDKPSN--CTNELYMMMRDCWHAVPSQRPTFKQLVE---DLDRIVALT 306
Query: 332 S 332
S
Sbjct: 307 S 307
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 63 LGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN---EIEILSKIHSPRLVNLLGFSN 119
LG G+ G VYKA + V + + +E+++ EI+IL+ P +V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +++EF + G + V+ RPL + + Q A+ LH IIHRD+K
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN--KIIHRDLK 162
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRF--RSTPPAGTIGYLDP----CYVTPDN-LS 232
+ N+L + + +L DFG++ + N R R GT ++ P C + D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAK----NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 233 TKTDVFSFGILLLEI 247
K DV+S GI L+E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 39/303 (12%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVKKPSKNQE 91
P+ QH E + + + LG+ G VYK L G + VA+K E
Sbjct: 10 PLINQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 92 --ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVL-----HSNN 144
+ +E +E + +++ P +V LLG + ++ + S+G L++ L HS+
Sbjct: 70 GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV 129
Query: 145 RPLNWGRRIRLAL----------QVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLG 194
+ R ++ AL Q+A +E L S ++H+D+ + NVL+ N ++
Sbjct: 130 GSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKIS 187
Query: 195 DFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAI 254
D GL ++ I ++ P + S +D++S+G++L E+ S
Sbjct: 188 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
Query: 255 DIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSM 314
G+S +V+ +I+ ++L P P D + + + C RRP
Sbjct: 248 YCGYSNQDVVE----MIRNRQVL-------PCPDD--CPAWVYALMIECWNEFPSRRPRF 294
Query: 315 KEI 317
K+I
Sbjct: 295 KDI 297
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 63 LGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN---EIEILSKIHSPRLVNLLGFSN 119
LG G+ G VYKA + V + + +E+++ EI+IL+ P +V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +++EF + G + V+ RPL + + Q A+ LH IIHRD+K
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN--KIIHRDLK 162
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRF--RSTPPAGTIGYLDP----CYVTPDN-LS 232
+ N+L + + +L DFG++ + N R R GT ++ P C + D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAK----NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 233 TKTDVFSFGILLLEI 247
K DV+S GI L+E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 59/302 (19%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
F E +L+G G G V+KA R G+ +++ N E + + E++ L+K+ +V+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE---KAEREVKALAKLDHVNIVHY 70
Query: 115 ----LGFSND-----------------------SKDRLLVV--EFMSNGTLYDVLHSNN- 144
GF D SK + L + EF GTL +
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 145 RPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGV 204
L+ + L Q+ K V+ +HS+ +IHRD+K +N+ + ++GDFGL
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSK--KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 205 DNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
D R RS GT+ Y+ P ++ + + D+++ G++L E++ D F
Sbjct: 189 DGKRTRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSKFF 242
Query: 265 DWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
++ G I +FD K+ + + + E RP+ EI+ LT
Sbjct: 243 ----TDLRDGIISDIFD------------KKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 286
Query: 325 SK 326
K
Sbjct: 287 KK 288
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 24/274 (8%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVKKPSKNQEI--SQEVDNEIEILSKIHSPRLVN 113
++LG+G G VY+ V + VAVK K+ + ++ +E I+ + P +V
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G + + +++E G L L N L + +LQ+ KA+ L S
Sbjct: 78 LIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES--INC 134
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI N+L+ +LGDFGL+ R D ++++ I ++ P + +T
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLS-RYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 193
Query: 234 KTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVR 293
+DV+ F + + EI+S K ++ +++KG L P + PP
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIG----VLEKGDRLP--KPDLCPP------ 241
Query: 294 KQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKL 327
L + RC RP E+V L+ + ++
Sbjct: 242 -VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 63 LGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN---EIEILSKIHSPRLVNLLGFSN 119
LG G+ G VYKA + V + + +E+++ EI+IL+ P +V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +++EF + G + V+ RPL + + Q A+ LH IIHRD+K
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN--KIIHRDLK 162
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRF--RSTPPAGTIGYLDP----CYVTPDN-LS 232
+ N+L + + +L DFG++ + N R R GT ++ P C + D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAK----NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 233 TKTDVFSFGILLLEI 247
K DV+S GI L+E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G +VAVK K ++ ++ +E+E++ I
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P L+ +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
A QVA+ +E L S+ IHRD+ + NVL+ + ++ DFGLA ++ ++T
Sbjct: 139 SCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+LL EI + +G SP P + V+ L+
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLL 250
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
K+G R+ P + +L ++ C + +RP+ K++V+ L ++V L
Sbjct: 251 KEGH-------RMDKPSN--CTNELYMMMRDCWHAVPSQRPTFKQLVE---DLDRIVALT 298
Query: 332 S 332
S
Sbjct: 299 S 299
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 60 QKLLGKGSHGSVYKAVLRGRQ--VAVKKPS----KNQEISQEVDNEIEILSKIHSPRLVN 113
++ LG+GS G V A Q VA+K S K ++ V+ EI L + P ++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPL-NWGRRIRLALQVAKAVEILHSEMPP 172
L D ++V+E+ + G L+D + R + GRR Q+ A+E H
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRR--FFQQIICAIEYCHRH--K 128
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
I+HRD+K N+L+D N N ++ DFGL+ NF S G+ P Y P+ ++
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGS-----PNYAAPEVIN 180
Query: 233 TK------TDVFSFGILLLEIISCRKAIDIGFSP 260
K DV+S GI+L ++ R D F P
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP 214
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 63 LGKGSHGSVYKAVLRG-------RQVAVKKPSKNQE--ISQEVDNEIEILSKIHSPRLVN 113
LG+ G VYK L G + VA+K E + +E +E + +++ P +V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-----HSNNRPLNWGRRIRLAL----------Q 158
LLG + ++ + S+G L++ L HS+ + R ++ AL Q
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTI 218
+A +E L S ++H+D+ + NVL+ N ++ D GL ++ I
Sbjct: 137 IAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 219 GYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILS 278
++ P + S +D++S+G++L E+ S G+S +V+ +I+ ++L
Sbjct: 195 RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE----MIRNRQVL- 249
Query: 279 VFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI 317
P P D + + + C RRP K+I
Sbjct: 250 ------PCPDD--CPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPS-KNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
+G+GS G V A +R G+ VAVKK + Q+ + + NE+ I+ +V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+EF+ G L D++ +N + + L V +A+ +LH++ +IHRDIK
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG--VIHRDIK 274
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S ++L+ + +L DFG + + R + GT ++ P ++ + D++S
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWS 332
Query: 240 FGILLLEII 248
GI+++E++
Sbjct: 333 LGIMVIEMV 341
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 27/267 (10%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKK--PSKNQEISQEVDNEIEI-LSKIHSPRLVNLLGF 117
LG+G++G V K V G+ +AVK+ + N + + + +++I + + P V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 118 SNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
D + +E M Y + + + ++A+ + KA+E LHS++ +IH
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIH 177
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD----NL 231
RD+K +NVLI+ ++ DFG++ G T AG Y+ P + P+
Sbjct: 178 RDVKPSNVLINALGQVKMCDFGIS---GYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 232 STKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPI 291
S K+D++S GI ++E+ R D W P + +++ P++P K
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYD---------SWGTPFQQLKQVVEEPSPQLPADK--- 282
Query: 292 VRKQLAVIAVRCVRSCRERRPSMKEIV 318
+ +C++ + RP+ E++
Sbjct: 283 FSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 24/274 (8%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVKKPSKNQEI--SQEVDNEIEILSKIHSPRLVN 113
++LG+G G VY+ V + VAVK K+ + ++ +E I+ + P +V
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G + + +++E G L L N L + +LQ+ KA+ L S
Sbjct: 90 LIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES--INC 146
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI N+L+ +LGDFGL+ R D ++++ I ++ P + +T
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLS-RYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 205
Query: 234 KTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVR 293
+DV+ F + + EI+S K ++ +++KG L P + PP
Sbjct: 206 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIG----VLEKGDRLP--KPDLCPP------ 253
Query: 294 KQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKL 327
L + RC RP E+V L+ + ++
Sbjct: 254 -VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 286
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPS-KNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
+G+GS G V A +R G+ VAVKK + Q+ + + NE+ I+ +V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+EF+ G L D++ +N + + L V +A+ +LH++ +IHRDIK
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG--VIHRDIK 197
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S ++L+ + +L DFG + + R + GT ++ P ++ + D++S
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWS 255
Query: 240 FGILLLEII 248
GI+++E++
Sbjct: 256 LGIMVIEMV 264
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 40 IKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKA------VLRGRQVAVKKPSKNQEIS 93
I +HF D E + LGKG G+VY A + +V K + + +
Sbjct: 15 ILTRHFTIDDFEIG-------RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE 67
Query: 94 QEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRI 153
++ EIEI + +H P ++ L + D + L++E+ G LY L + + R
Sbjct: 68 HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT-FDEQRTA 126
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
+ ++A A+ H + +IHRDIK N+L+ ++ DFG ++ R
Sbjct: 127 TIMEELADALMYCHGKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAP----SLRRKT 180
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEII 248
GT+ YL P + + K D++ G+L E++
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELL 215
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 24/274 (8%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVKKPSKNQEI--SQEVDNEIEILSKIHSPRLVN 113
++LG+G G VY+ V + VAVK K+ + ++ +E I+ + P +V
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G + + +++E G L L N L + +LQ+ KA+ L S
Sbjct: 74 LIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES--INC 130
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI N+L+ +LGDFGL+ R D ++++ I ++ P + +T
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLS-RYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 189
Query: 234 KTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVR 293
+DV+ F + + EI+S K ++ +++KG L P + PP
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIG----VLEKGDRLP--KPDLCPP------ 237
Query: 294 KQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKL 327
L + RC RP E+V L+ + ++
Sbjct: 238 -VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 270
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPS-KNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
+G+GS G V A +R G+ VAVKK + Q+ + + NE+ I+ +V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+EF+ G L D++ +N + + L V +A+ +LH++ +IHRDIK
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQ--GVIHRDIK 154
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S ++L+ + +L DFG + + R + GT ++ P ++ + D++S
Sbjct: 155 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWS 212
Query: 240 FGILLLEII 248
GI+++E++
Sbjct: 213 LGIMVIEMV 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 61 KLLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPR 110
+ LGKG Y K V G+ V + KP + +++S EI I + +P
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS----TEIAIHKSLDNPH 103
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
+V GF D +V+E +L + LH + + Q + V+ LH+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
+IHRD+K N+ ++ + + ++GDFGLA + D R ++ GT Y+ P +
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL--CGTPNYIAPEVLCKKG 218
Query: 231 LSTKTDVFSFGILLLEII 248
S + D++S G +L ++
Sbjct: 219 HSFEVDIWSLGCILYTLL 236
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 17/232 (7%)
Query: 63 LGKGSHGSVYKAVLRGRQ----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
LG G+ GSV + V R R+ VA+K K + ++E+ E +I+ ++ +P +V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
++ +LV+E G L+ L + L QV+ ++ L E +HR
Sbjct: 404 VCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL--EEKNFVHR 460
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT--IGYLDPCYVTPDNLSTK 234
++ + NVL+ A++ DFGL+ G D+ + + AG + + P + S++
Sbjct: 461 NLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 235 TDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPP 286
+DV+S+G+ + E +S + P ++ I++GK + P PP
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVM----AFIEQGKRMEC-PPECPP 566
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKK----PSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
LG G +VY A + +VA+K P + +E + + E+ S++ +V+++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+ LV+E++ TL + + S+ PL+ I Q+ ++ H+ I+HR
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIK--HAHDMRIVHR 135
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTD 236
DIK N+LID N ++ DFG+A + + ++ GT+ Y P + TD
Sbjct: 136 DIKPQNILIDSNKTLKIFDFGIA-KALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTD 194
Query: 237 VFSFGILLLEII 248
++S GI+L E++
Sbjct: 195 IYSIGIVLYEML 206
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPS-KNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
+G+GS G V A +R G+ VAVKK + Q+ + + NE+ I+ +V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+EF+ G L D++ +N + + L V +A+ +LH++ +IHRDIK
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQ--GVIHRDIK 152
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S ++L+ + +L DFG + + R + GT ++ P ++ + D++S
Sbjct: 153 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWS 210
Query: 240 FGILLLEII 248
GI+++E++
Sbjct: 211 LGIMVIEMV 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPS-KNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
+G+GS G V A +R G+ VAVKK + Q+ + + NE+ I+ +V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+EF+ G L D++ ++ R +N + + L V +A+ +LH++ +IHRDIK
Sbjct: 92 VGDELWVVMEFLEGGALTDIV-THTR-MNEEQIAAVCLAVLQALSVLHAQ--GVIHRDIK 147
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S ++L+ + +L DFG + + R + GT ++ P ++ + D++S
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWS 205
Query: 240 FGILLLEII 248
GI+++E++
Sbjct: 206 LGIMVIEMV 214
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQEVDNEIE 101
E N + +G+G+ G V++A G VAVK K + ++ + E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 102 ILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNN----------------- 144
++++ +P +V LLG K L+ E+M+ G L + L S +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 145 ------RPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
PL+ ++ +A QVA + L +HRD+ + N L+ N ++ DFGL
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGENMVVKIADFGL 220
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
+ ++ A I ++ P + + +T++DV+++G++L EI S
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPS-KNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
+G+GS G V A +R G+ VAVKK + Q+ + + NE+ I+ +V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
+ +V+EF+ G L D++ +N + + L V +A+ +LH++ +IHRDIK
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQ--GVIHRDIK 143
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S ++L+ + +L DFG + + R + GT ++ P ++ + D++S
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWS 201
Query: 240 FGILLLEII 248
GI+++E++
Sbjct: 202 LGIMVIEMV 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L N R + I L QV+ ++ L E
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYL--EES 124
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR +N+ T + + P +
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECINYY 183
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L N R + I L QV+ ++ L E
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYL--EES 130
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR +N+ T + + P +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECINYY 189
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P + + +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ ++T
Sbjct: 150 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 261
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 262 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P + + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ ++T
Sbjct: 153 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 264
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 265 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L N R + I L QV+ ++ L E
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYL--EES 146
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR +N+ T + + P +
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECINYY 205
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L N R + I L QV+ ++ L E
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYL--EES 146
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR +N+ T + + P +
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECINYY 205
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L N R + I L QV+ ++ L E
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYL--EES 144
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR +N+ T + + P +
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECINYY 203
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 204 KFSSKSDVWSFGVLMWEAFS 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L N R + I L QV+ ++ L E
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYL--EES 136
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR +N+ T + + P +
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECINYY 195
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 30/280 (10%)
Query: 60 QKLLGKGSHGSVYKAVLR--GRQ---VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
++++G G G V + L+ G++ VA+K K + +E +E I+ + P ++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
L G +S +++ EFM NG L L N+ + + + +A + L +EM
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL-AEM-S 138
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG---TIGYLDPCYVTPD 229
+HRD+ + N+L++ N ++ DFGL+ ++ T G I + P +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKD 289
++ +D +S+GI++ E++S + S +++ I++ D R+PPP D
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN----AIEQ-------DYRLPPPPD 247
Query: 290 -PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLV 328
P QL + C + R RP ++V + L K++
Sbjct: 248 CPTSLHQL---MLDCWQKDRNARPRFPQVV---SALDKMI 281
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 40/285 (14%)
Query: 60 QKLLGKGSHGSVYKAVLR--GRQ---VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
++++G G G V + L+ G++ VA+K K + +E +E I+ + P ++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
L G +S +++ EFM NG L L N+ + + + +A + L +EM
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL-AEM-S 136
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGT--------IGYLDPC 224
+HRD+ + N+L++ N ++ DFGL+ R +N S+ P T I + P
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLS-RFLEEN----SSDPTYTSSLGGKIPIRWTAPE 191
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRI 284
+ ++ +D +S+GI++ E++S + S +++ I++ D R+
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN----AIEQ-------DYRL 240
Query: 285 PPPKD-PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLV 328
PPP D P QL + C + R RP ++V + L K++
Sbjct: 241 PPPPDCPTSLHQL---MLDCWQKDRNARPRFPQVV---SALDKMI 279
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P + + +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ ++T
Sbjct: 148 SCTYQLARGMEYLASQ--KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 259
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 260 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L NR + I L QV+ ++ L E
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYL--EES 488
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR +N+ T + + P +
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECINYY 547
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS 567
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L N R + I L QV+ ++ L E
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYL--EES 126
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR +N+ T + + P +
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECINYY 185
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L NR + I L QV+ ++ L E
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYL--EES 489
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR +N+ T + + P +
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECINYY 548
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS 568
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 61 KLLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPR 110
+ LGKG Y K V G+ V + KP + +++S EI I + +P
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS----TEIAIHKSLDNPH 103
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
+V GF D +V+E +L + LH + + Q + V+ LH+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
+IHRD+K N+ ++ + + ++GDFGLA + D R + GT Y+ P +
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL--CGTPNYIAPEVLCKKG 218
Query: 231 LSTKTDVFSFGILLLEII 248
S + D++S G +L ++
Sbjct: 219 HSFEVDIWSLGCILYTLL 236
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 61 KLLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPR 110
+ LGKG Y K V G+ V + KP + +++S EI I + +P
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS----TEIAIHKSLDNPH 103
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
+V GF D +V+E +L + LH + + Q + V+ LH+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
+IHRD+K N+ ++ + + ++GDFGLA + D R + GT Y+ P +
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL--CGTPNYIAPEVLCKKG 218
Query: 231 LSTKTDVFSFGILLLEII 248
S + D++S G +L ++
Sbjct: 219 HSFEVDIWSLGCILYTLL 236
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 61 KLLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPR 110
+ LGKG Y K V G+ V + KP + +++S EI I + +P
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS----TEIAIHKSLDNPH 87
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
+V GF D +V+E +L + LH + + Q + V+ LH+
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
+IHRD+K N+ ++ + + ++GDFGLA + D R + GT Y+ P +
Sbjct: 147 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL--CGTPNYIAPEVLCKKG 202
Query: 231 LSTKTDVFSFGILLLEII 248
S + D++S G +L ++
Sbjct: 203 HSFEVDIWSLGCILYTLL 220
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 272
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 273 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 64 GKGSHGSVYKAVLRGRQVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLV--NLLGF--- 117
+G G V+KA L VAVK P ++++ Q +E EI S +P + NLL F
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQ---SEREIFS---TPGMKHENLLQFIAA 77
Query: 118 ----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP-- 171
SN + L+ F G+L D L N + W +A +++ + LH ++P
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 172 -------PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFR-STPPAGTIGYLDP 223
I HRD KS NVL+ + A L DFGLA+ RF PP T G +
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAV-------RFEPGKPPGDTHGQVGT 188
Query: 224 -CYVTPDNLS----------TKTDVFSFGILLLEIISCRKAID 255
Y+ P+ L + D+++ G++L E++S KA D
Sbjct: 189 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-RQVAVKKPSKNQEISQEVDN-----EIEI 102
DL + K++G+G+ G V + R+V K E+ + D+ E +I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 103 LSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
++ +SP +V L D + +V+E+M G L +++ + + P W R +V A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF--YTAEVVLA 185
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
++ +HS IHRD+K N+L+D++ + +L DFG ++ + R GT
Sbjct: 186 LDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGT----- 237
Query: 223 PCYVTPDNLSTK---------TDVFSFGILLLEII 248
P Y++P+ L ++ D +S G+ L E++
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-RQVAVKKPSKNQEISQEVDN-----EIEI 102
DL + K++G+G+ G V + R+V K E+ + D+ E +I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 103 LSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
++ +SP +V L D + +V+E+M G L +++ + + P W R +V A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF--YTAEVVLA 185
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
++ +HS IHRD+K N+L+D++ + +L DFG ++ + R GT
Sbjct: 186 LDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGT----- 237
Query: 223 PCYVTPDNLSTK---------TDVFSFGILLLEII 248
P Y++P+ L ++ D +S G+ L E++
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 59 EQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRL 111
E K LG G+ G+V K + +K + + + E+ E ++ ++ +P +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V ++G +++ +LV+E G L L N R + I L QV+ ++ L E
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYL--EES 130
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+HRD+ + NVL+ A++ DFGL ALR + ++ ++ Y C +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC-INYY 189
Query: 230 NLSTKTDVFSFGILLLEIIS 249
S+K+DV+SFG+L+ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 127/295 (43%), Gaps = 39/295 (13%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGR-------QVAVK--KPSKNQEISQEVDNEIE 101
E N K LG G+ G V +A G +VAVK K + + + + + +E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVA 160
I+S + +VNLLG L++ E+ G L + L +R L +A A
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 161 KAVEILH--SEMPP---------IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRF 209
++LH S++ IHRD+ + NVL+ A++GDFGLA D+
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 210 RSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSIV--DW 266
+ ++ P + + ++DV+S+GILL EI S +G +P P I+
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGILVNSK 275
Query: 267 AAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
L+K G ++ P P K + I C RP+ ++I +L
Sbjct: 276 FYKLVKDGYQMA--QPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRG-RQVAVKKPSKNQEISQEVDN-----EIEI 102
DL + K++G+G+ G V + R+V K E+ + D+ E +I
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 103 LSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
++ +SP +V L D + +V+E+M G L +++ + + P W R +V A
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF--YTAEVVLA 180
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
++ +HS IHRD+K N+L+D++ + +L DFG ++ + R GT
Sbjct: 181 LDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGT----- 232
Query: 223 PCYVTPDNLSTK---------TDVFSFGILLLEII 248
P Y++P+ L ++ D +S G+ L E++
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 52 AATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKN----QEISQEVDNEIEILSK 105
A + K LG+GS G V A G++VA+K +K ++ ++ EI L
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 70
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
+ P ++ L + ++V+E+ N L+D + ++ R R Q+ AVE
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEY 128
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
H I+HRD+K N+L+D + N ++ DFGL+ NF S P Y
Sbjct: 129 CHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG--------SPNY 178
Query: 226 VTPDNLSTK------TDVFSFGILLLEIISCRK 252
P+ +S K DV+S G++L ++ CR+
Sbjct: 179 AAPEVISGKLYAGPEVDVWSCGVILY-VMLCRR 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 125/305 (40%), Gaps = 42/305 (13%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + + K LG+G+ G V +A G R VAVK K +
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V VEF G L L S
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 147 ----LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC 202
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGLA
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASR--KXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 203 GVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPS 262
D R + ++ P + + ++DV+SFG+LL EI S +G SP
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYP 248
Query: 263 IVDWAAPL---IKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
V +K+G + D P ++ + C +RP+ E+V+
Sbjct: 249 GVKIDEEFXRRLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVE 299
Query: 320 WLTGL 324
L L
Sbjct: 300 HLGNL 304
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 34/291 (11%)
Query: 60 QKLLGKGSHGSVYKAVLR--GRQ---VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
++++G G G V L+ G++ VA+K K ++ ++ +E I+ + P ++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
+L G S +++ EFM NG+L L N+ + + + +A ++ L ++M
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL-ADM-N 129
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG---TIGYLDPCYVTPD 229
+HR + + N+L++ N ++ DFGL+ D T G I + P +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKD 289
++ +DV+S+GI++ E++S + + +++ I++ D R+PPP D
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN----AIEQ-------DYRLPPPMD 238
Query: 290 -PIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL-------TGLSKLVPLHS 332
P QL + C + R RP +IV+ L L + PL S
Sbjct: 239 CPSALHQL---MLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSS 286
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G +VAVK K ++ ++ +E+E++ I
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P L+ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
A QVA+ +E L S+ IHRD+ + NVL+ + ++ DFGLA + ++T
Sbjct: 154 SCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+LL EI + +G SP P + V+ L+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLL 265
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
K+G R+ P + +L ++ C + +RP+ K++V+ L ++V L
Sbjct: 266 KEGH-------RMDKPSN--CTNELYMMMRDCWHAVPSQRPTFKQLVE---DLDRIVALT 313
Query: 332 S 332
S
Sbjct: 314 S 314
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 52 AATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKN----QEISQEVDNEIEILSK 105
A + K LG+GS G V A G++VA+K +K ++ ++ EI L
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 69
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
+ P ++ L + ++V+E+ N L+D + ++ R R Q+ AVE
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEY 127
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
H I+HRD+K N+L+D + N ++ DFGL+ NF S P Y
Sbjct: 128 CHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG--------SPNY 177
Query: 226 VTPDNLSTK------TDVFSFGILLLEIISCRK 252
P+ +S K DV+S G++L ++ CR+
Sbjct: 178 AAPEVISGKLYAGPEVDVWSCGVILY-VMLCRR 209
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 52 AATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKN----QEISQEVDNEIEILSK 105
A + K LG+GS G V A G++VA+K +K ++ ++ EI L
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 64
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
+ P ++ L + ++V+E+ N L+D + ++ R R Q+ AVE
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEY 122
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
H I+HRD+K N+L+D + N ++ DFGL+ NF S G+ P Y
Sbjct: 123 CHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGS-----PNY 172
Query: 226 VTPDNLSTK------TDVFSFGILLLEIISCRK 252
P+ +S K DV+S G++L ++ CR+
Sbjct: 173 AAPEVISGKLYAGPEVDVWSCGVILY-VMLCRR 204
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 52 AATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKN----QEISQEVDNEIEILSK 105
A + K LG+GS G V A G++VA+K +K ++ ++ EI L
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 60
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
+ P ++ L + ++V+E+ N L+D + ++ R R Q+ AVE
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEY 118
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
H I+HRD+K N+L+D + N ++ DFGL+ NF S G+ P Y
Sbjct: 119 CHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGS-----PNY 168
Query: 226 VTPDNLSTK------TDVFSFGILLLEIISCRK 252
P+ +S K DV+S G++L ++ CR+
Sbjct: 169 AAPEVISGKLYAGPEVDVWSCGVILY-VMLCRR 200
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVK--KPSKNQEISQEVDNEIEILSKI 106
+A N +G G+ G V+K R G +AVK + S N+E ++ + +++++ K
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS 80
Query: 107 H-SPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVE 164
H P +V G + D + +E M GT + L + P+ ++ + + KA+
Sbjct: 81 HDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALY 138
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
L E +IHRD+K +N+L+D +L DFG++ R D + RS AG Y+ P
Sbjct: 139 YL-KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS---AGCAAYMAPE 194
Query: 225 YVTP-----DNLSTKTDVFSFGILLLEIIS 249
+ P + + DV+S GI L+E+ +
Sbjct: 195 RIDPPDPTKPDYDIRADVWSLGISLVELAT 224
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P + + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ ++T
Sbjct: 207 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 318
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 319 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 126/307 (41%), Gaps = 44/307 (14%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNN------RP- 146
+ +E++IL I H +VNLLG L+V VEF G L L S +P
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 147 ------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLAL 200
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGLA
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASR--KXIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 201 RCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
D R + ++ P + + ++DV+SFG+LL EI S +G SP
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP 250
Query: 261 PSIVDWAAPL---IKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEI 317
V +K+G + D P ++ + C +RP+ E+
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSEL 301
Query: 318 VDWLTGL 324
V+ L L
Sbjct: 302 VEHLGNL 308
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ +++LLG ++VE+ S G L + L + P + + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ ++T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 272
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 273 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 128/306 (41%), Gaps = 52/306 (16%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGR-------QVAVK--KPSKNQEISQEVDNEIE 101
E N K LG G+ G V +A G +VAVK K + + + + + +E++
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH------------------- 141
I+S + +VNLLG L++ E+ G L + L
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 142 ---SNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
+ RPL + + QVA+ + L S+ IHRD+ + NVL+ A++GDFGL
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGF 258
A D+ + ++ P + + ++DV+S+GILL EI S +G
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGL 258
Query: 259 SP-PSIV--DWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMK 315
+P P I+ L+K G ++ P P K + I C RP+ +
Sbjct: 259 NPYPGILVNSKFYKLVKDGYQMA--QPAFAP-------KNIYSIMQACWALEPTHRPTFQ 309
Query: 316 EIVDWL 321
+I +L
Sbjct: 310 QICSFL 315
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 151
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 231 LSTKTDVFSFGILLLEIIS 249
S +D+++ G ++ ++++
Sbjct: 211 ASKSSDLWALGCIIYQLVA 229
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 50 LEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEI----SQEVDNEIEIL 103
L+ + K++G+G+ G V + Q A+K SK + I S E +I+
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
+ +SP +V L D K +V+E+M G L +++ + + P W + +V A+
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF--YTAEVVLAL 187
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+ +HS +IHRD+K N+L+D++ + +L DFG ++ T GT P
Sbjct: 188 DAIHSM--GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT-AVGT-----P 239
Query: 224 CYVTPDNLSTK---------TDVFSFGILLLEII 248
Y++P+ L ++ D +S G+ L E++
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++ LLG ++VE+ S G L + L + P + + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ ++T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 272
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 273 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 126/305 (41%), Gaps = 42/305 (13%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + + K LG+G+ G V +A G R VAVK K +
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V VEF G L L S
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 147 ----LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRC 202
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGLA
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASR--KXIHRDLAARNILLSEKNVVKICDFGLARDI 194
Query: 203 GVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPP- 261
D R + ++ P + + ++DV+SFG+LL EI S +G SP
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYP 248
Query: 262 --SIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
I + +K+G + D P ++ + C +RP+ E+V+
Sbjct: 249 GVKIDEEFCRRLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVE 299
Query: 320 WLTGL 324
L L
Sbjct: 300 HLGNL 304
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 123/267 (46%), Gaps = 27/267 (10%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKK--PSKNQEISQEVDNEIEI-LSKIHSPRLVNLLGF 117
LG+G++G V K V G+ +AVK+ + N + + + +++I + + P V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 118 SNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
D + +E M Y + + + ++A+ + KA+E LHS++ +IH
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIH 133
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD----NL 231
RD+K +NVLI+ ++ DFG++ VD+ AG Y+ P + P+
Sbjct: 134 RDVKPSNVLINALGQVKMCDFGISGYL-VDD--VAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 232 STKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPI 291
S K+D++S GI ++E+ R D W P + +++ P++P K
Sbjct: 191 SVKSDIWSLGITMIELAILRFPYD---------SWGTPFQQLKQVVEEPSPQLPADK--- 238
Query: 292 VRKQLAVIAVRCVRSCRERRPSMKEIV 318
+ +C++ + RP+ E++
Sbjct: 239 FSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 79 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--F 135
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ N +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 195 ASDVWMFGVCMWEIL 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 81 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--F 137
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ N +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 197 ASDVWMFGVCMWEIL 211
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA + ++T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 272
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 273 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++VE+ S G L + L + P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA + ++T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 272
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 273 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++V + S G L + L + P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ ++T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 272
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 273 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 17/197 (8%)
Query: 62 LLGKGSHGSVYKAVLRGRQ------VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
+LGKGS G V K R Q V K +KN++ S + E+E+L K+ P ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST-ILREVELLKKLDHPNIMKLF 87
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
DS +V E + G L+D + R + R+ QV + +H I+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKH--NIVH 144
Query: 176 RDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
RD+K N+L+ +++ + ++ DFGL+ C N + + GT Y+ P V
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDR--IGTAYYIAP-EVLRGTYD 200
Query: 233 TKTDVFSFGILLLEIIS 249
K DV+S G++L ++S
Sbjct: 201 EKCDVWSAGVILYILLS 217
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K +G GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+M G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 104 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--F 160
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ N +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 220 ASDVWMFGVCMWEIL 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K +G GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+M G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 43/297 (14%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGR-------QVAVK--KPSKNQEISQEVDNEIE 101
E N K LG G+ G V +A G +VAVK K + + + + + +E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA---- 156
I+S + +VNLLG L++ E+ G L + L +R L +A
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL 161
Query: 157 ---------LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNF 207
QVA+ + L S+ IHRD+ + NVL+ A++GDFGLA D+
Sbjct: 162 STRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 208 RFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSIV-- 264
+ ++ P + + ++DV+S+GILL EI S +G +P P I+
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGILVN 273
Query: 265 DWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
L+K G ++ P P K + I C RP+ ++I +L
Sbjct: 274 SKFYKLVKDGYQMA--QPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 78 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--F 134
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ N +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 194 ASDVWMFGVCMWEIL 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 27/269 (10%)
Query: 60 QKLLGKGSHGSVYKAVLR---GRQVAVK----KPSKNQEISQEVDNEIEILSKIHSPRLV 112
++++G G G V L+ R VAV K ++ ++ E I+ + P +V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
+L G K ++V+EFM NG L L ++ + + + +A + L ++M
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL-ADM-G 165
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG--YLDPCYVTPDN 230
+HRD+ + N+L++ N ++ DFGL+ R D+ T G I + P +
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLS-RVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 231 LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKD- 289
++ +DV+S+GI++ E++S + S ++ I++G R+P P D
Sbjct: 225 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK----AIEEGY-------RLPAPMDC 273
Query: 290 PIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
P QL + C + R RP ++IV
Sbjct: 274 PAGLHQL---MLDCWQKERAERPKFEQIV 299
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--F 132
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ N +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 17/197 (8%)
Query: 62 LLGKGSHGSVYKAVLRGRQ------VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
+LGKGS G V K R Q V K +KN++ S + E+E+L K+ P ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST-ILREVELLKKLDHPNIMKLF 87
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
DS +V E + G L+D + R + R+ QV + +H I+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKH--NIVH 144
Query: 176 RDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
RD+K N+L+ +++ + ++ DFGL+ C N + + GT Y+ P V
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDR--IGTAYYIAP-EVLRGTYD 200
Query: 233 TKTDVFSFGILLLEIIS 249
K DV+S G++L ++S
Sbjct: 201 EKCDVWSAGVILYILLS 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 40/283 (14%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPS-KNQEISQEVDNEIEILSKIHSPRLVNLLGFSN 119
+G+GS G V A + GRQVAVK + Q+ + + NE+ I+ +V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 120 DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIK 179
++ +++EF+ G L D++ S R LN + + V +A+ LH++ +IHRDIK
Sbjct: 113 VGEELWVLMEFLQGGALTDIV-SQVR-LNEEQIATVCEAVLQALAYLHAQ--GVIHRDIK 168
Query: 180 SANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
S ++L+ + +L DFG + D + + GT ++ P ++ +T+ D++S
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKXL--VGTPYWMAPEVISRSLYATEVDIWS 226
Query: 240 FGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK-------DPIV 292
GI+++E++ PP D +K+ + PPPK P++
Sbjct: 227 LGIMVIEMVDG--------EPPYFSDSPVQAMKRLR-------DSPPPKLKNSHKVSPVL 271
Query: 293 RKQLAVIAVRCVRSCRERRPSMKEIVD----WLTGLSK-LVPL 330
R L + VR + R + +E++D TGL + LVPL
Sbjct: 272 RDFLERMLVR----DPQERATAQELLDHPFLLQTGLPECLVPL 310
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 73 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--F 129
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ N +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 189 ASDVWMFGVCMWEIL 203
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 126/308 (40%), Gaps = 45/308 (14%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + + K LG+G+ G V +A G R VAVK K +
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V VEF G L L S
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 147 -------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA 199
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGLA
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 200 LRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFS 259
D R + ++ P + + ++DV+SFG+LL EI S +G S
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGAS 249
Query: 260 P---PSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKE 316
P I + +K+G + D P ++ + C +RP+ E
Sbjct: 250 PYPGVKIDEEFCRRLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSE 300
Query: 317 IVDWLTGL 324
+V+ L L
Sbjct: 301 LVEHLGNL 308
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--F 132
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ N +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ AGT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 61 KLLGKGSHGSVYKAVLRG---------RQVAVK--KPSKNQEISQEVDNEIEILSKIHSP 109
K LG+G+ G V A G VAVK K ++ ++ +E+E++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 110 R-LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP---------------LNWGRRI 153
+ ++NLLG ++V + S G L + L + P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
Q+A+ +E L S+ IHRD+ + NVL+ N ++ DFGLA ++ ++T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSI-VDWAAPLI 271
+ ++ P + + ++DV+SFG+L+ EI + +G SP P I V+ L+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVEELFKLL 272
Query: 272 KKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
K+G R+ P + +L ++ C + +RP+ K++V+
Sbjct: 273 KEGH-------RMDKPAN--CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 63 LGKGSHGSVYKAVL------RGRQVAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
LG+G G V G VAVK K + EI+IL ++ ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 115 LGFSNDSKDR--LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G D ++ LV+E++ G+L D L ++ + + + A Q+ + + LHS+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHSQH-- 137
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRC--GVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IHR++ + NVL+D + ++GDFGLA G + +R R + Y C +
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKEYK 196
Query: 231 LSTKTDVFSFGILLLEIISCRKAIDIGFSPPS 262
+DV+SFG+ L E+++ D SPP+
Sbjct: 197 FYYASDVWSFGVTLYELLT---HCDSSQSPPT 225
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 173 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 277
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 278 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 312
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 45/299 (15%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGR-------QVAVK--KPSKNQEISQEVDNEIE 101
E N K LG G+ G V +A G +VAVK K + + + + + +E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVL---------------HSNNR 145
I+S + +VNLLG L++ E+ G L + L H+
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 146 PLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD 205
L+ + + QVA+ + L S+ IHRD+ + NVL+ A++GDFGLA D
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 206 NFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PSIV 264
+ + ++ P + + ++DV+S+GILL EI S +G +P P I+
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGIL 273
Query: 265 --DWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
L+K G ++ P P K + I C RP+ ++I +L
Sbjct: 274 VNSKFYKLVKDGYQMA--QPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK++ +V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 173 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 277
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 278 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 312
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK++ +V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 159 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 263
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 264 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 298
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 37/218 (16%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKPS---KNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+L+G+G +G+VYK L R VAVK S + I+++ + ++ + R + +G
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFI--VGD 76
Query: 118 SNDSKD----RLLVVEFMSNGTL--YDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
+ D LLV+E+ NG+L Y LH+++ W RLA V + + LH+E+P
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGLAYLHTELP 132
Query: 172 -------PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFR-------STPPAGT 217
I HRD+ S NVL+ + + DFGL++R N R + GT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL-TGNRLVRPGEEDNAAISEVGT 191
Query: 218 IGYLDPCYVT-------PDNLSTKTDVFSFGILLLEII 248
I Y+ P + ++ + D+++ G++ EI
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPAI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 78 GRQVAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSNDS--KDRLLVVEFMSN 133
G VAVK K + EI+IL ++ ++ G D+ LV+E++
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 134 GTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARL 193
G+L D L ++ + + + A Q+ + + LH++ IHRD+ + NVL+D + ++
Sbjct: 120 GSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKI 175
Query: 194 GDFGLALRC--GVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCR 251
GDFGLA G + +R R + Y C + +DV+SFG+ L E+++
Sbjct: 176 GDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC-LKEYKFYYASDVWSFGVTLYELLT-- 232
Query: 252 KAIDIGFSPPS 262
D SPP+
Sbjct: 233 -HCDSSQSPPT 242
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V VEF G L L S
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 147 --------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGL
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
A D R + ++ P + + ++DV+SFG+LL EI S
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ T D PL + Q+ + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSY--LFQLLQGLAF 121
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 122 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 177
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 60 QKLLGKGSHGSVYKAVLR--GRQ---VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
+K++G G G V LR G++ VA+K K + ++ +E I+ + P ++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
L G + ++V E+M NG+L L +++ + + + V + L S++
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL-SDLG- 171
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG--YLDPCYVTPDN 230
+HRD+ + NVL+D N ++ DFGL+ R D+ T G I + P +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLS-RVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 231 LSTKTDVFSFGILLLEIIS 249
S+ +DV+SFG+++ E+++
Sbjct: 231 FSSASDVWSFGVVMWEVLA 249
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V VEF G L L S
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 147 --------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGL
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
A D R + ++ P + + ++DV+SFG+LL EI S
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 11/190 (5%)
Query: 66 GSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN---EIEILSKIHSPRLVNLLGFSNDSK 122
G G VYKA + V + + +E+++ EI+IL+ P +V LL
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 123 DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSAN 182
+ +++EF + G + V+ RPL + + Q A+ LH IIHRD+K+ N
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN--KIIHRDLKAGN 138
Query: 183 VLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP----CYVTPDN-LSTKTDV 237
+L + + +L DFG++ + + R + GT ++ P C + D K DV
Sbjct: 139 ILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYWMAPEVVMCETSKDRPYDYKADV 197
Query: 238 FSFGILLLEI 247
+S GI L+E+
Sbjct: 198 WSLGITLIEM 207
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVK-----KPSKNQEISQEVDNEIEILS 104
A + F K LG GS G V K + G A+K K K +EI + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL-NEKRILQ 96
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ P LV L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS +I+RD+K N++ID+ ++ DFGLA R + R+ GT YL P
Sbjct: 156 YLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 225 YVTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 159 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 263
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 264 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 298
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 17/197 (8%)
Query: 62 LLGKGSHGSVYKAVLRGRQ------VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
+LGKGS G V K R Q V K +KN++ S + E+E+L K+ P ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST-ILREVELLKKLDHPNIMKLF 87
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
DS +V E + G L+D + R + R+ QV + +H I+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKH--NIVH 144
Query: 176 RDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
RD+K N+L+ +++ + ++ DFGL+ C N + + GT Y+ P V
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDR--IGTAYYIAP-EVLRGTYD 200
Query: 233 TKTDVFSFGILLLEIIS 249
K DV+S G++L ++S
Sbjct: 201 EKCDVWSAGVILYILLS 217
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 173 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 277
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 278 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 312
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 177
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 178 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 230
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAA 254
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 125/309 (40%), Gaps = 46/309 (14%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V VEF G L L S
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 147 --------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGL
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGL 196
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGF 258
A D R + ++ P + + ++DV+SFG+LL EI S +G
Sbjct: 197 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGA 250
Query: 259 SP---PSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMK 315
SP I + +K+G + D P ++ + C +RP+
Sbjct: 251 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFS 301
Query: 316 EIVDWLTGL 324
E+V+ L L
Sbjct: 302 ELVEHLGNL 310
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 125/309 (40%), Gaps = 46/309 (14%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V VEF G L L S
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 147 --------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGL
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGF 258
A D R + ++ P + + ++DV+SFG+LL EI S +G
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGA 285
Query: 259 SP---PSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMK 315
SP I + +K+G + D P ++ + C +RP+
Sbjct: 286 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFS 336
Query: 316 EIVDWLTGL 324
E+V+ L L
Sbjct: 337 ELVEHLGNL 345
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 175 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 232
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 233 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 279
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 280 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 314
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVK---------KPSKNQEISQ 94
D++ + + + ++G+G V + V R G + AVK P + +E+ +
Sbjct: 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVRE 144
Query: 95 EVDNEIEILSKIH-SPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRI 153
E IL ++ P ++ L+ S LV + M G L+D L + L+
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETR 203
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRST 212
+ + +AV LH+ I+HRD+K N+L+D N RL DFG + C ++ + R
Sbjct: 204 SIMRSLLEAVSFLHAN--NIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPGEKLREL 259
Query: 213 PPAGTIGYLDP----CYV--TPDNLSTKTDVFSFGILLLEIIS 249
GT GYL P C + T + D+++ G++L +++
Sbjct: 260 --CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 158 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 216 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 262
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 263 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 297
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 159 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 263
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 264 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 298
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 185 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 242
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 243 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 289
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 290 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 324
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 150 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 207
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 208 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 254
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 255 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 289
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 165 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 222
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 223 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 269
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 270 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 304
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 20/230 (8%)
Query: 39 PIKIQHFDYSDLEAATNGF---SEQKLLGKGSHGSVYKA--VLRGRQVAVKK-PSKNQEI 92
P H + + A N F S+ ++LG G G V+K G ++A K ++ +
Sbjct: 70 PAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD 129
Query: 93 SQEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRR 152
+EV NEI +++++ L+ L D +LV+E++ G L+D + + L
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVL-IDRNFNA-RLGDFGLALRCGVDNFRFR 210
I Q+ + + +H I+H D+K N+L ++R+ ++ DFGLA R R +
Sbjct: 190 ILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP---REK 244
Query: 211 STPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
GT +L P V D +S TD++S G++ ++S G SP
Sbjct: 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS-------GLSP 287
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 55 NGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHS 108
N F KLLGKG+ G V K GR A+K K ++++ E +L
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 109 PRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILH 167
P + L +S + DRL V+E+ + G L+ L S R + R ++ A++ LH
Sbjct: 208 P-FLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLH 265
Query: 168 SEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVT 227
SE +++RD+K N+++D++ + ++ DFGL D ++ GT YL P +
Sbjct: 266 SE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF--CGTPEYLAPEVLE 322
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
++ D + G+++ E++ R
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A ++ + + ++ P
Sbjct: 158 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 216 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 262
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 263 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 297
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 149
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 150 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKS 208
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 209 ACKSSDLWALGCIIYQLVA 227
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 60 QKLLGKGSHGSVYKAVLR--GRQ---VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLV 112
+K++G G G V LR G++ VA+K K + ++ +E I+ + P ++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
L G + ++V E+M NG+L L +++ + + + V + L S++
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL-SDLG- 171
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG--YLDPCYVTPDN 230
+HRD+ + NVL+D N ++ DFGL+ R D+ T G I + P +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLS-RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 231 LSTKTDVFSFGILLLEIIS 249
S+ +DV+SFG+++ E+++
Sbjct: 231 FSSASDVWSFGVVMWEVLA 249
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V VEF G L L S
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 147 --------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGL
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
A D R + ++ P + + ++DV+SFG+LL EI S
Sbjct: 195 ARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVK-----KPSKNQEISQEVDNEIEILS 104
A + F K LG GS G V K + G A+K K K +EI + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL-NEKRILQ 96
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ P LV L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS +I+RD+K N++ID+ ++ DFGLA R + R+ GT YL P
Sbjct: 156 YLHS--LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 225 YVTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKK-PSKNQEISQEVDNEIEILSKIHSPRLVNL 114
LG+G+ G V+ A VAVK + ++ E E+L+ + +V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDVLHSN----------NRP--LNWGRRIRLALQVAKA 162
G + ++V E+M +G L L ++ N P L + + +A Q+A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+ L S+ +HRD+ + N L+ N ++GDFG++ ++ I ++
Sbjct: 141 MVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP 198
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP 282
P + +T++DV+S G++L EI + K S +++ I +G++L P
Sbjct: 199 PESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE----CITQGRVLQ--RP 252
Query: 283 RIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVPLH 331
R P +++ + + C + R ++K I L L+K P++
Sbjct: 253 RTCP-------QEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVY 294
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 156
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 157 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 215
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 216 ACKSSDLWALGCIIYQLVA 234
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 55 NGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHS 108
N F KLLGKG+ G V K GR A+K K ++++ E +L
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 109 PRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILH 167
P + L +S + DRL V+E+ + G L+ L S R + R ++ A++ LH
Sbjct: 211 P-FLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLH 268
Query: 168 SEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVT 227
SE +++RD+K N+++D++ + ++ DFGL D ++ GT YL P +
Sbjct: 269 SE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF--CGTPEYLAPEVLE 325
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
++ D + G+++ E++ R
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 151
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 211 ACKSSDLWALGCIIYQLVA 229
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 456 LIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--F 512
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ N +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 33 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 151
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 152 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 204
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAA 228
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLV-VEFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V VEF G L L S
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 147 --------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGL
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
A D R + ++ P + + ++DV+SFG+LL EI S
Sbjct: 195 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 120/280 (42%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A + + + ++ P
Sbjct: 199 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 256
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 257 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 303
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 304 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 338
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 152
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 153 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 211
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 212 ACKSSDLWALGCIIYQLVA 230
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 120/280 (42%), Gaps = 43/280 (15%)
Query: 63 LGKGSHGSVYKAVLRGR-------QVAVKKPSKNQEISQEVDNEIE--ILSKIHSPRLVN 113
LG G+ G VY+ + G QVAVK + E+D +E I+SK + +V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVL-HSNNRP-----LNWGRRIRLALQVAKAVEILH 167
+G S S R +++E M+ G L L + RP L + +A +A + L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 168 SEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
IHRDI + N L+ A++GDFG+A + + + ++ P
Sbjct: 176 ENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 233
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDP-- 282
++KTD +SFG+LL EI S +G+ P P ++L
Sbjct: 234 AFMEGIFTSKTDTWSFGVLLWEIFS------LGYMP-------YPSKSNQEVLEFVTSGG 280
Query: 283 RIPPPKD---PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
R+ PPK+ P+ R I +C + E RP+ I++
Sbjct: 281 RMDPPKNCPGPVYR-----IMTQCWQHQPEDRPNFAIILE 315
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 15/211 (7%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKN-----QEISQEVDNEIE 101
D + N F KLLGKG+ G V + GR A+K K E++ V E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESR 62
Query: 102 ILSKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVA 160
+L P + L ++ + DRL V+E+ + G L+ L S R R ++
Sbjct: 63 VLQNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIV 120
Query: 161 KAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGY 220
A+E LHS +++RDIK N+++D++ + ++ DFGL D + GT Y
Sbjct: 121 SALEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--CGTPEY 176
Query: 221 LDPCYVTPDNLSTKTDVFSFGILLLEIISCR 251
L P + ++ D + G+++ E++ R
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 25/275 (9%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSKI 106
E + F + LG G+ G V+K + + + + + EI + N E+++L +
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEI 165
+SP +V G + + +E M G+L VL R P ++ +A V K +
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 138
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
L E I+HRD+K +N+L++ +L DFG++ + +D+ + GT Y+ P
Sbjct: 139 LR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSPER 193
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIP 285
+ + S ++D++S G+ L+E+ R I G +I + ++ + P
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNE-----------P 242
Query: 286 PPKDP--IVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PPK P + + +C+ R +K+++
Sbjct: 243 PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 277
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLVV-EFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V+ EF G L L S
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 147 --------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGL
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
A D R + ++ P + + ++DV+SFG+LL EI S
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 151
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 211 AXKSSDLWALGCIIYQLVA 229
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 154
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 155 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 213
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 214 ACKSSDLWALGCIIYQLVA 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 151
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 211 ACKSSDLWALGCIIYQLVA 229
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 63 LGKGSHGSVYKAVL------RGRQVAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
LG+G G V G VAVK K + EI+IL ++ ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 115 LGFSNDSKDR--LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G D ++ LV+E++ G+L D L ++ + + + A Q+ + + LH++
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH-- 137
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRC--GVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IHR++ + NVL+D + ++GDFGLA G + +R R + Y C +
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKEYK 196
Query: 231 LSTKTDVFSFGILLLEIISCRKAIDIGFSPPS 262
+DV+SFG+ L E+++ D SPP+
Sbjct: 197 FYYASDVWSFGVTLYELLT---HCDSSQSPPT 225
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 152
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 153 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 211
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 212 ACKSSDLWALGCIIYQLVA 230
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 19/276 (6%)
Query: 50 LEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSK 105
+E + F + LG G+ G V+K + + + + + EI + N E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVE 164
+SP +V G + + +E M G+L VL R P ++ +A V K +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLT 118
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
L E I+HRD+K +N+L++ +L DFG++ + +D+ + GT Y+ P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSPE 173
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRI 284
+ + S ++D++S G+ L+E+ R I PP + + P + ++L +
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKEDSRPPMAIFELLD-YIVNE 228
Query: 285 PPPKDP--IVRKQLAVIAVRCVRSCRERRPSMKEIV 318
PPPK P + + +C+ R +K+++
Sbjct: 229 PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 264
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKN-----QEISQEVDNEIEIL 103
+ N F KLLGKG+ G V + GR A+K K E++ V E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVL 59
Query: 104 SKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
P + L ++ + DRL V+E+ + G L+ L S R R ++ A
Sbjct: 60 QNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSA 117
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E LHS +++RDIK N+++D++ + ++ DFGL D ++ GT YL
Sbjct: 118 LEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--CGTPEYLA 173
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISCR 251
P + ++ D + G+++ E++ R
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 149
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 150 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 209 ACKSSDLWALGCIIYQLVA 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 149
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 150 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 209 ACKSSDLWALGCIIYQLVA 227
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 24 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 83
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 142
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 143 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEI 195
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAA 219
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 151
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 211 ACKSSDLWALGCIIYQLVA 229
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKN-----QEISQEVDNEIEIL 103
+ N F KLLGKG+ G V + GR A+K K E++ V E +L
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVL 62
Query: 104 SKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
P + L ++ + DRL V+E+ + G L+ L S R R ++ A
Sbjct: 63 QNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSA 120
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E LHS +++RDIK N+++D++ + ++ DFGL D ++ GT YL
Sbjct: 121 LEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--CGTPEYLA 176
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISCR 251
P + ++ D + G+++ E++ R
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K +G GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 151
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 211 ACKSSDLWALGCIIYQLVA 229
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSH 129
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 130 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGX 185
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 63 LGKGSHGSVYKAVL------RGRQVAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
LG+G G V G VAVK K ++ EIEIL ++ +V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 115 LGFSNDSKDR--LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G D ++ LV+E++ G+L D L + L + + A Q+ + + LH++
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLHAQH-- 131
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRC--GVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IHR + + NVL+D + ++GDFGLA G + +R R + Y C +
Sbjct: 132 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKECK 190
Query: 231 LSTKTDVFSFGILLLEIIS 249
+DV+SFG+ L E+++
Sbjct: 191 FYYASDVWSFGVTLYELLT 209
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 125/309 (40%), Gaps = 46/309 (14%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLVV-EFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V+ EF G L L S
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 147 --------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGL
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGF 258
A D R + ++ P + + ++DV+SFG+LL EI S +G
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGA 239
Query: 259 SP---PSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMK 315
SP I + +K+G + D P ++ + C +RP+
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFS 290
Query: 316 EIVDWLTGL 324
E+V+ L L
Sbjct: 291 ELVEHLGNL 299
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKN-----QEISQEVDNEIEIL 103
+ N F KLLGKG+ G V + GR A+K K E++ V E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVL 59
Query: 104 SKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
P + L ++ + DRL V+E+ + G L+ L S R R ++ A
Sbjct: 60 QNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSA 117
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E LHS +++RDIK N+++D++ + ++ DFGL D ++ GT YL
Sbjct: 118 LEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--CGTPEYLA 173
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISCR 251
P + ++ D + G+++ E++ R
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 63 LGKGSHGSVYKAVL------RGRQVAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
LG+G G V G VAVK K ++ EIEIL ++ +V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 115 LGFSNDSKDR--LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G D ++ LV+E++ G+L D L + L + + A Q+ + + LH++
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLHAQH-- 132
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRC--GVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IHR + + NVL+D + ++GDFGLA G + +R R + Y C +
Sbjct: 133 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKECK 191
Query: 231 LSTKTDVFSFGILLLEIIS 249
+DV+SFG+ L E+++
Sbjct: 192 FYYASDVWSFGVTLYELLT 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR-GRQVAVKKPSKNQEISQEVDNEIEILSK------IHSP 109
F K+LGKGS G V+ A + Q K K + + D E ++ K P
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
L ++ ++ V+E+++ G L + S ++ + R A ++ ++ LHS+
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSK 138
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
I++RD+K N+L+D++ + ++ DFG+ + + ++ GT Y+ P +
Sbjct: 139 --GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNEFCGTPDYIAPEILLGQ 194
Query: 230 NLSTKTDVFSFGILLLEII 248
+ D +SFG+LL E++
Sbjct: 195 KYNHSVDWWSFGVLLYEML 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 128
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 129 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 187
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 188 ACKSSDLWALGCIIYQLVA 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSH 122
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 123 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGX 178
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 126
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 127 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 185
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 186 ACKSSDLWALGCIIYQLVA 204
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 45 FDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQE 95
+D S E + K LG+G+ G V +A G R VAVK K +
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 96 VDNEIEILSKI-HSPRLVNLLGFSNDSKDRLLVV-EFMSNGTLYDVLHSNNRP------- 146
+ +E++IL I H +VNLLG L+V+ EF G L L S
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 147 --------LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGL 198
L I + QVAK +E L S IHRD+ + N+L+ ++ DFGL
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 199 ALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
A D R + ++ P + + ++DV+SFG+LL EI S
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 42/297 (14%)
Query: 42 IQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQEVDNE 99
+ D S L F +L+G G++G VYK V G+ A+K + +E+ E
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE 70
Query: 100 IEILSKI-HSPRLVNLLG-FSNDS----KDRL-LVVEFMSNGTLYDVLHS---NNRPLNW 149
I +L K H + G F + D+L LV+EF G++ D++ + N W
Sbjct: 71 INMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW 130
Query: 150 GRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRF 209
I ++ + + LH +IHRDIK NVL+ N +L DFG++ + +D
Sbjct: 131 IAYI--CREILRGLSHLHQH--KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ--LDRTVG 184
Query: 210 RSTPPAGTIGYLDP----CYVTPD-NLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIV 264
R GT ++ P C PD K+D++S GI +E +
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE----------------MA 228
Query: 265 DWAAPLIKKGKILSVF-DPRIPPP--KDPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
+ A PL + ++F PR P P K K+ C+ +RP+ ++++
Sbjct: 229 EGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLM 285
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 39 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 148
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 149 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 207
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 208 ACKSSDLWALGCIIYQLVA 226
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSVY--KAVLR---GRQVAVKKPSK-NQEISQEVDNEIE--I 102
+A + F K+LG+GS G V+ + V R G A+K K ++ V ++E I
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 103 LSKIHSPRLVNL-LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAK 161
L+ ++ P +V L F + K L+++F+ G L+ L + LA ++A
Sbjct: 84 LADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELAL 141
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
++ LHS II+RD+K N+L+D + +L DFGL+ + +D+ + ++ GT+ Y+
Sbjct: 142 GLDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLS-KEAIDHEK-KAYSFCGTVEYM 197
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIIS 249
P V S D +S+G+L+ E+++
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSVY--KAVL--RGRQVAVKKPSKNQ--EISQEVDNEIE--I 102
+A + F K+LG+GS G V+ K + RQ+ K K ++ V ++E I
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 103 LSKIHSPRLVNL-LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAK 161
L +++ P +V L F + K L+++F+ G L+ L + LA ++A
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELAL 138
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
A++ LHS II+RD+K N+L+D + +L DFGL+ + +D+ + ++ GT+ Y+
Sbjct: 139 ALDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLS-KESIDHEK-KAYSFCGTVEYM 194
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIIS 249
P V + D +SFG+L+ E+++
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLT 222
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 130
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 131 --IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 188
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 189 ACKSSDLWALGCIIYQLVA 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 127
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 128 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 186
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 187 ACKSSDLWALGCIIYQLVA 205
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N++ID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKNQEISQE----VDNEIEI 102
D N F KLLGKG+ G V K GR A+K K ++++ E +
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 103 LSKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAK 161
L P + L +S + DRL V+E+ + G L+ L S R + R ++
Sbjct: 64 LQNSRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVS 121
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
A++ LHSE +++RD+K N+++D++ + ++ DFGL D + GT YL
Sbjct: 122 ALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF--CGTPEYL 178
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIISCR 251
P + ++ D + G+++ E++ R
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 133
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 134 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 192
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 193 ACKSSDLWALGCIIYQLVA 211
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 18/218 (8%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQ--EVDNEIEILS 104
D + + + +G G V A +L G VA+K KN S + EIE L
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 105 KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+ + L + +V+E+ G L+D + S +R R+ Q+ AV
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR-QIVSAVA 122
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALR-CGVDNFRFRSTPPAGTIGYLDP 223
+HS+ HRD+K N+L D +L DFGL + G ++ ++ G++ Y P
Sbjct: 123 YVHSQ--GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC--CGSLAYAAP 178
Query: 224 CYVT-PDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
+ L ++ DV+S GILL ++ C GF P
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLY-VLMC------GFLP 209
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSVY--KAVL--RGRQVAVKKPSKNQ--EISQEVDNEIE--I 102
+A + F K+LG+GS G V+ K + RQ+ K K ++ V ++E I
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 103 LSKIHSPRLVNL-LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAK 161
L +++ P +V L F + K L+++F+ G L+ L + LA ++A
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELAL 137
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
A++ LHS II+RD+K N+L+D + +L DFGL+ + +D+ + ++ GT+ Y+
Sbjct: 138 ALDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLS-KESIDHEK-KAYSFCGTVEYM 193
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIIS 249
P V + D +SFG+L+ E+++
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLSFCHSH 122
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 123 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 178
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSVY--KAVL--RGRQVAVKKPSKNQ--EISQEVDNEIE--I 102
+A + F K+LG+GS G V+ K + RQ+ K K ++ V ++E I
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 103 LSKIHSPRLVNL-LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAK 161
L +++ P +V L F + K L+++F+ G L+ L + LA ++A
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELAL 137
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
A++ LHS II+RD+K N+L+D + +L DFGL+ + +D+ + ++ GT+ Y+
Sbjct: 138 ALDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLS-KESIDHEK-KAYSFCGTVEYM 193
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIIS 249
P V + D +SFG+L+ E+++
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSH 129
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 130 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 185
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 119
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T T+ Y P
Sbjct: 120 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEI 175
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAFCHSH 122
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 123 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 178
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAFCHSH 121
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 122 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 177
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNGT--LYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+S D PL + Q+ + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 121
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 122 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 177
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
+ + K +G G+ G V A + G VAVKK P +NQ ++ E+ +L ++ +
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 112 VNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++LL K D LV+E M + L V+H L+ R L Q+ ++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKH 141
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS IIHRD+K +N+++ + ++ DFGLA R NF TP T Y P
Sbjct: 142 LHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTACTNFMM--TPYVVTRYYRAPEV 196
Query: 226 VTPDNLSTKTDVFSFGILLLEII 248
+ + D++S G ++ E++
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELV 219
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLXGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSH 122
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 123 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 178
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 126 LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLI 185
+V+E++ TL D++H+ P+ R I + +A+ H IIHRD+K AN+LI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANILI 149
Query: 186 DRNFNARLGDFGLALRCGVD--NFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGIL 243
++ DFG+A R D N ++ GT YL P D++ ++DV+S G +
Sbjct: 150 SATNAVKVVDFGIA-RAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 244 LLEIISCRKAIDIGFSPPSI 263
L E+++ G SP S+
Sbjct: 209 LYEVLTGEPPF-TGDSPVSV 227
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+S D PL + Q+ + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 121
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 122 CHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 177
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAFCHSH 121
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 122 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 177
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS +V A + R+ A+K K I + V E +++S++ P
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 148
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 149 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 207
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 208 ACKSSDLWALGCIIYQLVA 226
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAFCHSH 126
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 127 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 182
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 55 NGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHS 108
N F KLLGKG+ G V K GR A+K K ++++ E +L
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 109 PRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILH 167
P + L +S + DRL V+E+ + G L+ L S R + R ++ A++ LH
Sbjct: 69 P-FLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLH 126
Query: 168 SEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVT 227
SE +++RD+K N+++D++ + ++ DFGL D + GT YL P +
Sbjct: 127 SE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF--CGTPEYLAPEVLE 183
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
++ D + G+++ E++ R
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+S D PL + Q+ + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 119
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 120 CHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 175
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNGT--LYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+S D PL + Q+ + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 120
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 121 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKN-----QEISQEVDNEIEIL 103
+ N F KLLGKG+ G V + GR A+K K E++ V E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVL 59
Query: 104 SKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
P + L ++ + DRL V+E+ + G L+ L S R R ++ A
Sbjct: 60 QNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSA 117
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E LHS +++RDIK N+++D++ + ++ DFGL D + GT YL
Sbjct: 118 LEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--CGTPEYLA 173
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISCR 251
P + ++ D + G+++ E++ R
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 149
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 150 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 202
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAA 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--F 132
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ N +LGDFGL+ R D+ +++ I ++ P + ++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 25 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 143
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID ++ DFG A R + R+ GT YL P
Sbjct: 144 LHS--LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 196
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAA 220
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 55 NGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHS 108
N F KLLGKG+ G V K GR A+K K ++++ E +L
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 109 PRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILH 167
P + L +S + DRL V+E+ + G L+ L S R + R ++ A++ LH
Sbjct: 68 P-FLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLH 125
Query: 168 SEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVT 227
SE +++RD+K N+++D++ + ++ DFGL D + GT YL P +
Sbjct: 126 SE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF--CGTPEYLAPEVLE 182
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
++ D + G+++ E++ R
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKN-----QEISQEVDNEIEIL 103
+ N F KLLGKG+ G V + GR A+K K E++ V E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVL 59
Query: 104 SKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
P + L ++ + DRL V+E+ + G L+ L S R R ++ A
Sbjct: 60 QNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSA 117
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E LHS +++RDIK N+++D++ + ++ DFGL D + GT YL
Sbjct: 118 LEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--CGTPEYLA 173
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISCR 251
P + ++ D + G+++ E++ R
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 126 LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLI 185
+V+E++ TL D++H+ P+ R I + +A+ H IIHRD+K AN++I
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMI 149
Query: 186 DRNFNARLGDFGLALRCGVD--NFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGIL 243
++ DFG+A R D N ++ GT YL P D++ ++DV+S G +
Sbjct: 150 SATNAVKVMDFGIA-RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 244 LLEIISCRKAIDIGFSPPSIV 264
L E+++ G SP S+
Sbjct: 209 LYEVLTGEPPF-TGDSPDSVA 228
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 51 EAATNGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKN-----QEISQEVDNEIEIL 103
+ N F KLLGKG+ G V + GR A+K K E++ V E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVL 59
Query: 104 SKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
P + L ++ + DRL V+E+ + G L+ L S R R ++ A
Sbjct: 60 QNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSA 117
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E LHS +++RDIK N+++D++ + ++ DFGL D + GT YL
Sbjct: 118 LEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--CGTPEYLA 173
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISCR 251
P + ++ D + G+++ E++ R
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--F 132
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR-GRQVAVKKPSKNQEISQEVDNEIEILSK------IHSP 109
F K+LGKGS G V+ A + Q K K + + D E ++ K P
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
L ++ ++ V+E+++ G L + S ++ + R A ++ ++ LHS+
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSK 137
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
I++RD+K N+L+D++ + ++ DFG+ + + ++ GT Y+ P +
Sbjct: 138 --GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNXFCGTPDYIAPEILLGQ 193
Query: 230 NLSTKTDVFSFGILLLEII 248
+ D +SFG+LL E++
Sbjct: 194 KYNHSVDWWSFGVLLYEML 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 126 LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLI 185
+V+E++ TL D++H+ P+ R I + +A+ H IIHRD+K AN++I
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMI 149
Query: 186 DRNFNARLGDFGLALRCGVD--NFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGIL 243
++ DFG+A R D N ++ GT YL P D++ ++DV+S G +
Sbjct: 150 SATNAVKVMDFGIA-RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 244 LLEIISCRKAIDIGFSPPSI 263
L E+++ G SP S+
Sbjct: 209 LYEVLTGEPPF-TGDSPVSV 227
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N++ID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAA 233
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 51/305 (16%)
Query: 52 AATNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQE--ISQEVDNEIEILSKIH 107
++++ F + + LG G++ +VYK + + G VA+K+ + E EI ++ ++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLAL------QV 159
+V L + LV EFM N D N P R + L L Q+
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTP----RGLELNLVKYFQWQL 117
Query: 160 AKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG 219
+ + H I+HRD+K N+LI++ +LGDFGLA G+ F S T+
Sbjct: 118 LQGLAFCHEN--KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE--VVTLW 173
Query: 220 YLDP-CYVTPDNLSTKTDVFSFGILLLEIISCR------------KAIDIGFSPPSIVDW 266
Y P + ST D++S G +L E+I+ + K I P+ W
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 267 AAPLIKKGKILSVFDPRIP--PPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
P + K L ++P I PP+D +R V + P ++D+L GL
Sbjct: 234 --PSVTK---LPKYNPNIQQRPPRD-----------LRQVLQPHTKEPLDGNLMDFLHGL 277
Query: 325 SKLVP 329
+L P
Sbjct: 278 LQLNP 282
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N++ID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 59 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 177
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 178 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 230
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAA 254
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAF 121
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 122 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 177
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 126 LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLI 185
+V+E++ TL D++H+ P+ R I + +A+ H IIHRD+K AN++I
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMI 149
Query: 186 DRNFNARLGDFGLALRCGVD--NFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGIL 243
++ DFG+A R D N ++ GT YL P D++ ++DV+S G +
Sbjct: 150 SATNAVKVMDFGIA-RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 244 LLEIISCRKAIDIGFSPPSI 263
L E+++ G SP S+
Sbjct: 209 LYEVLTGEPPF-TGDSPVSV 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 126 LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLI 185
+V+E++ TL D++H+ P+ R I + +A+ H IIHRD+K AN++I
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMI 149
Query: 186 DRNFNARLGDFGLALRCGVD--NFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGIL 243
++ DFG+A R D N ++ GT YL P D++ ++DV+S G +
Sbjct: 150 SATNAVKVMDFGIA-RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 244 LLEIISCRKAIDIGFSPPSI 263
L E+++ G SP S+
Sbjct: 209 LYEVLTGEPPF-TGDSPVSV 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAF 120
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 121 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQE----VDNEIEILSKIHSPR 110
F K+LG+GS + A + R+ A+K K I + V E +++S++ P
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
V L D + + + NG L + R A ++ A+E LH +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK- 149
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
IIHRD+K N+L++ + + ++ DFG A ++ + R+ GT Y+ P +T +
Sbjct: 150 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 231 LSTKTDVFSFGILLLEIIS 249
+D+++ G ++ ++++
Sbjct: 209 ACKSSDLWALGCIIYQLVA 227
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 121
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 122 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 177
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 120
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 121 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAF 120
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 121 CHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 176
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAF 118
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 119 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 174
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAF 118
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 119 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 174
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAF 119
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 120 CHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 175
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 119
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 120 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 175
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 126 LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLI 185
+V+E++ TL D++H+ P+ R I + +A+ H IIHRD+K AN++I
Sbjct: 110 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMI 166
Query: 186 DRNFNARLGDFGLALRCGVD--NFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGIL 243
++ DFG+A R D N ++ GT YL P D++ ++DV+S G +
Sbjct: 167 SATNAVKVMDFGIA-RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 244 LLEIISCRKAIDIGFSPPSI 263
L E+++ G SP S+
Sbjct: 226 LYEVLTGEPPF-TGDSPVSV 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N++ID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 122
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 123 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 178
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 149
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 150 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 202
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAA 226
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E++ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 118
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 119 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 174
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 177
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + TP YL P
Sbjct: 178 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE-----YLAPEI 230
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAA 254
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ ++ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAA 233
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAFCHSH 121
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T+ Y P +
Sbjct: 122 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 177
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAFCHSH 123
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T+ Y P +
Sbjct: 124 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 179
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNGT--LYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKS--YLFQLLQGLAF 118
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 119 CHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 174
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV EF+ D PL + Q+ + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAF 118
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 119 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 174
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 61 KLLGKGSHGSVYKAVLRGR-------QVAVK--KPSKNQEISQEVDNEIEILSKIHS-PR 110
K+LG G+ G V A G QVAVK K + + + +E+++++++ S
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRP----------------------LN 148
+VNLLG S L+ E+ G L + L S L
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 149 WGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NF 207
+ + A QVAK +E L E +HRD+ + NVL+ ++ DFGLA D N+
Sbjct: 171 FEDLLCFAYQVAKGMEFL--EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 208 RFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
R + ++ P + + K+DV+S+GILL EI S
Sbjct: 229 VVRGNARL-PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAFCHSH 121
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T+ Y P +
Sbjct: 122 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEILLGC 177
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ-----VAVK--KPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+ +G+G G V++ + + VA+K K + + ++ E + + P +V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L+G ++ +++E + G L L L+ I A Q++ A+ L S+
Sbjct: 456 LIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--F 512
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
+HRDI + NVL+ +LGDFGL+ R D+ ++++ I ++ P + ++
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 234 KTDVFSFGILLLEII 248
+DV+ FG+ + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPS----KNQEISQEVDNEIEILSKIHSPR 110
FS+ + +G GS G+VY A V VA+KK S ++ E Q++ E+ L K+ P
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
+ G LV+E+ G+ D+L + +PL + + + LHS
Sbjct: 116 TIQYRGCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH- 173
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLA-LRCGVDNFRFRSTPPAGTIGYLDPCYVTP- 228
+IHRD+K+ N+L+ +LGDFG A + + F GT ++ P +
Sbjct: 174 -NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-------VGTPYWMAPEVILAM 225
Query: 229 --DNLSTKTDVFSFGILLLEI 247
K DV+S GI +E+
Sbjct: 226 DEGQYDGKVDVWSLGITCIEL 246
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P L L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N++ID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++ P +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV E + T D PL + Q+ + + HS
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKS--YLFQLLQGLAFCHSH 121
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 122 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 177
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N++ID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 50 LEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSK 105
+E + F + LG G+ G V+K + + + + + EI + N E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVE 164
+SP +V G + + +E M G+L VL R P ++ +A V K +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLT 118
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
L E I+HRD+K +N+L++ +L DFG++ + +D+ + GT Y+ P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSPE 173
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ + S ++D++S G+ L+E+ R I
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
+ + K +G G+ G V A + G VAVKK P +NQ ++ E+ +L ++ +
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 112 VNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++LL K D LV+E M + L V+H L+ R L Q+ ++
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKH 139
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS IIHRD+K +N+++ + ++ DFGLA R NF TP T Y P
Sbjct: 140 LHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTASTNFMM--TPYVVTRYYRAPEV 194
Query: 226 VTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELV 217
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 50 LEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSK 105
+E + F + LG G+ G V+K + + + + + EI + N E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVE 164
+SP +V G + + +E M G+L VL R P ++ +A V K +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLT 118
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
L E I+HRD+K +N+L++ +L DFG++ + +D+ + GT Y+ P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSPE 173
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ + S ++D++S G+ L+E+ R I
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 50 LEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSK 105
+E + F + LG G+ G V+K + + + + + EI + N E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVE 164
+SP +V G + + +E M G+L VL R P ++ +A V K +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLT 118
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
L E I+HRD+K +N+L++ +L DFG++ + +D+ + GT Y+ P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSPE 173
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ + S ++D++S G+ L+E+ R I
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 50 LEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSK 105
+E + F + LG G+ G V+K + + + + + EI + N E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVE 164
+SP +V G + + +E M G+L VL R P ++ +A V K +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLT 118
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
L E I+HRD+K +N+L++ +L DFG++ + +D+ + GT Y+ P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSPE 173
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ + S ++D++S G+ L+E+ R I
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 61 KLLGKGSHGSVYKAVLRG--RQVAVKKPSKNQ---------EISQEVDNEIEILSKIHSP 109
K LG G+ G V A R ++VA+K SK + + + V+ EIEIL K++ P
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
++ + F D++D +V+E M G L+D + N R ++ Q+ AV+ LH
Sbjct: 82 CIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHEN 139
Query: 170 MPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP--- 223
IIHRD+K NVL+ + + ++ DFG + G + R+ GT YL P
Sbjct: 140 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTL--CGTPTYLAPEVL 194
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIIS 249
V + D +S G++L +S
Sbjct: 195 VSVGTAGYNRAVDCWSLGVILFICLS 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 61 KLLGKGSHGSVYKAVLRG--RQVAVKKPSKNQ---------EISQEVDNEIEILSKIHSP 109
K LG G+ G V A R ++VA+K SK + + + V+ EIEIL K++ P
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
++ + F D++D +V+E M G L+D + N R ++ Q+ AV+ LH
Sbjct: 76 CIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHEN 133
Query: 170 MPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP--- 223
IIHRD+K NVL+ + + ++ DFG + G + R+ GT YL P
Sbjct: 134 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTL--CGTPTYLAPEVL 188
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIIS 249
V + D +S G++L +S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 61 KLLGKGSHGSVYKAVLRG--RQVAVKKPSKNQ---------EISQEVDNEIEILSKIHSP 109
K LG G+ G V A R ++VA+K SK + + + V+ EIEIL K++ P
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
++ + F D++D +V+E M G L+D + N R ++ Q+ AV+ LH
Sbjct: 75 CIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHEN 132
Query: 170 MPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP--- 223
IIHRD+K NVL+ + + ++ DFG + G + R+ GT YL P
Sbjct: 133 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTL--CGTPTYLAPEVL 187
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIIS 249
V + D +S G++L +S
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLS 213
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPS----KNQEISQEVDNEIEILSKIHSPR 110
FS+ + +G GS G+VY A V VA+KK S ++ E Q++ E+ L K+ P
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
+ G LV+E+ G+ D+L + +PL + + + LHS
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH- 134
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLA-LRCGVDNFRFRSTPPAGTIGYLDPCYVTP- 228
+IHRD+K+ N+L+ +LGDFG A + + F GT ++ P +
Sbjct: 135 -NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-------VGTPYWMAPEVILAM 186
Query: 229 --DNLSTKTDVFSFGILLLEI 247
K DV+S GI +E+
Sbjct: 187 DEGQYDGKVDVWSLGITCIEL 207
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 61 KLLGKGSHGSVYKAVLRG--RQVAVKKPSKNQ---------EISQEVDNEIEILSKIHSP 109
K LG G+ G V A R ++VA+K SK + + + V+ EIEIL K++ P
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
++ + F D++D +V+E M G L+D + N R ++ Q+ AV+ LH
Sbjct: 76 CIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHEN 133
Query: 170 MPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP--- 223
IIHRD+K NVL+ + + ++ DFG + G + R+ GT YL P
Sbjct: 134 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTL--CGTPTYLAPEVL 188
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIIS 249
V + D +S G++L +S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 61 KLLGKGSHGSVYKAVLRG--RQVAVKKPSKNQ---------EISQEVDNEIEILSKIHSP 109
K LG G+ G V A R ++VA+K SK + + + V+ EIEIL K++ P
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
++ + F D++D +V+E M G L+D + N R ++ Q+ AV+ LH
Sbjct: 76 CIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHEN 133
Query: 170 MPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP--- 223
IIHRD+K NVL+ + + ++ DFG + G + R+ GT YL P
Sbjct: 134 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTL--CGTPTYLAPEVL 188
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIIS 249
V + D +S G++L +S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P L L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N++ID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K + G A+K K + + + NE IL
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P L L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N++ID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+ K ++ + + EI +L +++ P +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSH 122
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 123 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 178
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRL 111
F + + +G+G++G VYKA L G VA+ K ++ + + EI +L +++ P +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 112 VNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
V LL + LV EF+ D PL + Q+ + + HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSH 121
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTP 228
++HRD+K N+LI+ +L DFGLA GV + T T+ Y P +
Sbjct: 122 R--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGC 177
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
ST D++S G + E+++ R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 61 KLLGKGSHGSVYKAVLRGR-----QVAVKKPSKNQEISQ--EVDNEIEILSKIHSPRLVN 113
+++GKG G VY + Q A+K S+ E+ Q E ++ ++ P ++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 114 LLGFSNDSKDR-LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
L+G + +++ +M +G L + S R I LQVA+ +E L +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ--K 144
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLAL------RCGVDNFRFRSTPPAGTIGYLDPCYV 226
+HRD+ + N ++D +F ++ DFGLA V R P T Y
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY- 203
Query: 227 TPDNLSTKTDVFSFGILLLEIIS 249
+TK+DV+SFG+LL E+++
Sbjct: 204 ---RFTTKSDVWSFGVLLWELLT 223
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLRGR--QVAVKKPSKNQEISQEVDNEIEILSKI-HSPR 110
++G+ ++ +G GS+ + V + + AVK K++ E EIEIL + P
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE---EIEILLRYGQHPN 82
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQ-VAKAVEILHSE 169
++ L +D K LV E M G L D + + R L + K VE LHS+
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKIL--RQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 170 MPPIIHRDIKSANVL-IDRNFNA---RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
++HRD+K +N+L +D + N R+ DFG A + +N + P T ++ P
Sbjct: 141 --GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT--PCYTANFVAPEV 196
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
+ D++S GILL +++ G++P
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLA-------GYTP 224
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 23/213 (10%)
Query: 55 NGFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPS--KNQEISQEVDNEIEILSKIHSPR 110
+ + Q+++G G+ V A + +VA+K+ + K Q E+ EI+ +S+ H P
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 111 LVNLLGFSNDSKDRL-LVVEFMSNGTLYDVL-------HSNNRPLNWGRRIRLALQVAKA 162
+V+ S KD L LV++ +S G++ D++ + L+ + +V +
Sbjct: 70 IVSYYT-SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E LH IHRD+K+ N+L+ + + ++ DFG++ R+ +G
Sbjct: 129 LEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG--T 184
Query: 223 PCYVTPDNLST------KTDVFSFGILLLEIIS 249
PC++ P+ + K D++SFGI +E+ +
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 217
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLRGR--QVAVKKPSKNQEISQEVDNEIEILSKI-HSPR 110
++G+ ++ +G GS+ + V + + AVK K++ E EIEIL + P
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE---EIEILLRYGQHPN 82
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQ-VAKAVEILHSE 169
++ L +D K LV E M G L D + + R L + K VE LHS+
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKIL--RQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 170 MPPIIHRDIKSANVL-IDRNFNA---RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
++HRD+K +N+L +D + N R+ DFG A + +N + P T ++ P
Sbjct: 141 --GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT--PCYTANFVAPEV 196
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
+ D++S GILL +++ G++P
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLA-------GYTP 224
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 23/213 (10%)
Query: 55 NGFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPS--KNQEISQEVDNEIEILSKIHSPR 110
+ + Q+++G G+ V A + +VA+K+ + K Q E+ EI+ +S+ H P
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 111 LVNLLGFSNDSKDRL-LVVEFMSNGTLYDVL-------HSNNRPLNWGRRIRLALQVAKA 162
+V+ S KD L LV++ +S G++ D++ + L+ + +V +
Sbjct: 75 IVSYYT-SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E LH IHRD+K+ N+L+ + + ++ DFG++ R+ +G
Sbjct: 134 LEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG--T 189
Query: 223 PCYVTPDNLST------KTDVFSFGILLLEIIS 249
PC++ P+ + K D++SFGI +E+ +
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 222
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F K LG GS G V K G A+K K + + + NE IL
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+++ G ++ L R R A Q+ E
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + TP A L P
Sbjct: 157 LHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-----LAPEI 209
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIK 133
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 134 HLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 188
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLVGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G+++ E+I
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLVGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G+++ E+I
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 25/208 (12%)
Query: 57 FSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPS----KNQEISQEVDNEIEILSKIHSPR 110
F +K +G+G VY+A +L G VA+KK + + + EI++L +++ P
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVL--HSNNRPLNWGRRI-RLALQVAKAVEILH 167
++ + + +V+E G L ++ + L R + + +Q+ A+E +H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 168 SEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPA------GTIGYL 221
S ++HRDIK ANV I +LGD GL RF S+ GT Y+
Sbjct: 154 SRR--VMHRDIKPANVFITATGVVKLGDLGLG--------RFFSSKTTAAHSLVGTPYYM 203
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIIS 249
P + + + K+D++S G LL E+ +
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSKI 106
E + F + LG G+ G V+K + + + + + EI + N E+++L +
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEI 165
+SP +V G + + +E M G+L VL R P ++ +A V K +
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 146
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
L E I+HRD+K +N+L++ +L DFG++ + +D+ + GT Y+ P
Sbjct: 147 LR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSPER 201
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ + S ++D++S G+ L+E+ R I
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 62 LLGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
L+G+GS+G V K + GR VA+KK ++ + + EI++L ++ LVNLL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K LV EF+ + T+ D L L++ + Q+ + HS IIHR
Sbjct: 92 VCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH--NIIHR 148
Query: 177 DIKSANVLIDRNFNARLGDFGLA 199
DIK N+L+ ++ +L DFG A
Sbjct: 149 DIKPENILVSQSGVVKLCDFGFA 171
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 26/278 (9%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKP---------SKNQEISQEVDNEIEILSKIHSPRL 111
K+LG G G+V+K V ++K P S Q D+ + I S H+ +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA-HI 95
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V LLG S +L V +++ G+L D + + L + +Q+AK + L E
Sbjct: 96 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL--EEH 152
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
++HR++ + NVL+ ++ DFG+A D+ + + I ++ +
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 232 STKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPI 291
+ ++DV+S+G+ + E+++ G + D L++KG+ R+ P+ I
Sbjct: 213 THQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD----LLEKGE-------RLAQPQ--I 259
Query: 292 VRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSKLVP 329
+ ++ V+C RP+ KE+ + T +++ P
Sbjct: 260 CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPP 297
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 26/275 (9%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKKP---------SKNQEISQEVDNEIEILSKIHSPRL 111
K+LG G G+V+K V ++K P S Q D+ + I S H+ +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA-HI 77
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V LLG S +L V +++ G+L D + + L + +Q+AK + L E
Sbjct: 78 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL--EEH 134
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
++HR++ + NVL+ ++ DFG+A D+ + + I ++ +
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 232 STKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPI 291
+ ++DV+S+G+ + E+++ G + D L++KG+ R+ P+ I
Sbjct: 195 THQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD----LLEKGE-------RLAQPQ--I 241
Query: 292 VRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSK 326
+ ++ V+C RP+ KE+ + T +++
Sbjct: 242 CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSKI 106
E + F + LG G+ G V+K + + + + + EI + N E+++L +
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEI 165
+SP +V G + + +E M G+L VL R P ++ +A V K +
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 181
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
L E I+HRD+K +N+L++ +L DFG++ + +D+ + GT Y+ P
Sbjct: 182 LR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSPER 236
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ + S ++D++S G+ L+E+ R I
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 178
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 179 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 233
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 52/279 (18%)
Query: 63 LGKGSHGSVYKAVLRGRQVAV-------KKPSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
+G+GS +VYK + V V +K +K++ Q E E L + P +V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE--RQRFKEEAEXLKGLQHPNIVRFY 91
Query: 116 -GFSNDSKDR---LLVVEFMSNGTLYDVLHSNNRPL-----NWGRRIRLALQVAKAVEIL 166
+ + K + +LV E ++GTL L +W R Q+ K ++ L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR------QILKGLQFL 145
Query: 167 HSEMPPIIHRDIKSANVLIDR-NFNARLGDFGLA-LRCGVDNFRFRSTPPAGTIGYLDPC 224
H+ PPIIHRD+K N+ I + ++GD GLA L+ R++ IG P
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK--------RASFAKAVIG--TPE 195
Query: 225 YVTPDNLSTK----TDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVF 280
+ P+ K DV++FG LE + P S AA + ++ V
Sbjct: 196 FXAPEXYEEKYDESVDVYAFGXCXLEXATSE-------YPYSECQNAAQIYRR-----VT 243
Query: 281 DPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
P D + ++ I C+R ++ R S+K++++
Sbjct: 244 SGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 178
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 179 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 233
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 62 LLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPRL 111
LGKG + K V G+ V + KP + +++S E I I + +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME----ISIHRSLAHQHV 83
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V GF D+ +V+E +L + LH + L Q+ + LH
Sbjct: 84 VGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 141
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
+IHRD+K N+ ++ + ++GDFGLA + D R ++ GT Y+ P ++
Sbjct: 142 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL--CGTPNYIAPEVLSKKGH 198
Query: 232 STKTDVFSFGILLLEII 248
S + DV+S G ++ ++
Sbjct: 199 SFEVDVWSIGCIMYTLL 215
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 16/216 (7%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQE- 95
P++I+H + + + + LG G+ G V++ R G A K E +E
Sbjct: 147 PVEIKH------DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET 200
Query: 96 VDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRL 155
V EI+ +S + P LVNL D + +++ EFMS G L++ + + ++ +
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY 260
Query: 156 ALQVAKAVEILHSEMPPIIHRDIKSANVLI--DRNFNARLGDFGLALRCGVDNFRFRSTP 213
QV K + +H +H D+K N++ R+ +L DFGL +T
Sbjct: 261 MRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT- 317
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
GT + P + TD++S G+L ++S
Sbjct: 318 --GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 351
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 141
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 142 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 196
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 62 LLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPRL 111
LGKG + K V G+ V + KP + +++S E I I + +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME----ISIHRSLAHQHV 79
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V GF D+ +V+E +L + LH + L Q+ + LH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 137
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
+IHRD+K N+ ++ + ++GDFGLA + D R ++ GT Y+ P ++
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL--CGTPNYIAPEVLSKKGH 194
Query: 232 STKTDVFSFGILLLEII 248
S + DV+S G ++ ++
Sbjct: 195 SFEVDVWSIGCIMYTLL 211
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 141
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 142 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 196
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 62 LLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPRL 111
LGKG + K V G+ V + KP + +++S E I I + +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME----ISIHRSLAHQHV 79
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V GF D+ +V+E +L + LH + L Q+ + LH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 137
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
+IHRD+K N+ ++ + ++GDFGLA + D R ++ GT Y+ P ++
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL--CGTPNYIAPEVLSKKGH 194
Query: 232 STKTDVFSFGILLLEII 248
S + DV+S G ++ ++
Sbjct: 195 SFEVDVWSIGCIMYTLL 211
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 133
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 134 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 188
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 134
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 135 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 189
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 134
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 135 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 189
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y AVL R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
+++LL K D LV+E M + L V+ L+ R L Q+ ++
Sbjct: 84 IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 139
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 140 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 194
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E++
Sbjct: 195 VILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPEVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E+I
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSKI 106
E + F + LG G+ G V+K + + + + + EI + N E+++L +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEI 165
+SP +V G + + +E M G+L VL R P ++ +A V K +
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 122
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
L E I+HRD+K +N+L++ +L DFG++ + +D + GT Y+ P
Sbjct: 123 LR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEM---ANEFVGTRSYMSPER 177
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCR 251
+ + S ++D++S G+ L+E+ R
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 16/216 (7%)
Query: 39 PIKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQE- 95
P++I+H + + + + LG G+ G V++ R G A K E +E
Sbjct: 41 PVEIKH------DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET 94
Query: 96 VDNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRL 155
V EI+ +S + P LVNL D + +++ EFMS G L++ + + ++ +
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY 154
Query: 156 ALQVAKAVEILHSEMPPIIHRDIKSANVLI--DRNFNARLGDFGLALRCGVDNFRFRSTP 213
QV K + +H +H D+K N++ R+ +L DFGL +T
Sbjct: 155 MRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT- 211
Query: 214 PAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
GT + P + TD++S G+L ++S
Sbjct: 212 --GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 14/204 (6%)
Query: 52 AATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEIS----QEVDNEIEILSK 105
A + F + LG GS G V K G A+K K + + + NE I
Sbjct: 39 AHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ P LV L D+ + +V+E+ G ++ L R R A Q+ E
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LHS +I+RD+K N+LID+ ++ DFG A R + R+ GT YL P
Sbjct: 158 LHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEI 210
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ + D ++ G+L+ E+ +
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 86 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 141
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 142 HLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 196
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E+I
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMI 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 43 QHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVD 97
QH+D++ + G +G+G++GSV K V + G+ +AVK+ +E Q +
Sbjct: 15 QHWDFTAEDLKDLG-----EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLM 69
Query: 98 NEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHS---NNRPLNWGRR 152
+ ++ P +V G D + +E MS Y ++S + P +
Sbjct: 70 DLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGK 129
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST 212
I LA KA+ L + IIHRDIK +N+L+DR+ N +L DFG++ + VD+ T
Sbjct: 130 ITLA--TVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQL-VDS--IAKT 183
Query: 213 PPAGTIGYLDPCYVTP----DNLSTKTDVFSFGILLLEIISCR 251
AG Y+ P + P ++DV+S GI L E+ + R
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 63 LGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVD----NEIEILSKIHSPRLVNLLGFS 118
+G+G+ G V+ LR V S + + ++ E IL + P +V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ +V+E + G L + L +++ A +E L S+ IHRD+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDL 239
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFR-----FRSTPPAGTIGYLDPCYVTPDNLST 233
+ N L+ ++ DFG++ R D R P + + P + S+
Sbjct: 240 AARNCLVTEKNVLKISDFGMS-REEADGVXAASGGLRQVP----VKWTAPEALNYGRYSS 294
Query: 234 KTDVFSFGILLLEIIS 249
++DV+SFGILL E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLVGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E+I
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 30/220 (13%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKKPS-KNQEISQE-VDNEIEILSKIHSPRLV 112
F + LG+G G V++A + A+K+ N+E+++E V E++ L+K+ P +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 113 NLLG--FSNDSKDRL----------LVVEFMSNGTLYDVLHSNNRPLNWGRRI--RLALQ 158
++ ++L + ++ L D ++ R + + LQ
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFR---------- 208
+A+AVE LHS+ ++HRD+K +N+ + ++GDFGL D
Sbjct: 127 IAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 209 FRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEII 248
R T GT Y+ P + ++ S K D+FS G++L E++
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E+I
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E+I
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 61 KLLGKGSHGSVYKAVLRG--RQVAVKKPSKNQ---------EISQEVDNEIEILSKIHSP 109
K LG G+ G V A R ++VA++ SK + + + V+ EIEIL K++ P
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
++ + F D++D +V+E M G L+D + N R ++ Q+ AV+ LH
Sbjct: 201 CIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHEN 258
Query: 170 MPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP--- 223
IIHRD+K NVL+ + + ++ DFG + G + R+ GT YL P
Sbjct: 259 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTL--CGTPTYLAPEVL 313
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIIS 249
V + D +S G++L +S
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLS 339
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 89
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 90 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 145
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 146 HLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 200
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ D++S G ++ E++ C K +
Sbjct: 201 VILGMGYKENVDLWSVGCIMGEMV-CHKIL 229
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 63 LGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVD----NEIEILSKIHSPRLVNLLGFS 118
+G+G+ G V+ LR V S + + ++ E IL + P +V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ +V+E + G L + L +++ A +E L S+ IHRD+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDL 239
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFR-----FRSTPPAGTIGYLDPCYVTPDNLST 233
+ N L+ ++ DFG++ R D R P + + P + S+
Sbjct: 240 AARNCLVTEKNVLKISDFGMS-REEADGVYAASGGLRQVP----VKWTAPEALNYGRYSS 294
Query: 234 KTDVFSFGILLLEIIS 249
++DV+SFGILL E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 61 KLLGKGSHGSVYKAVLRG--RQVAVKKPSKNQ---------EISQEVDNEIEILSKIHSP 109
K LG G+ G V A R ++VA++ SK + + + V+ EIEIL K++ P
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
++ + F D++D +V+E M G L+D + N R ++ Q+ AV+ LH
Sbjct: 215 CIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHEN 272
Query: 170 MPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP--- 223
IIHRD+K NVL+ + + ++ DFG + G + R+ GT YL P
Sbjct: 273 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTL--CGTPTYLAPEVL 327
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIIS 249
V + D +S G++L +S
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLS 353
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
+ F + + +G+G++G VYKA L G VA+KK ++ + + EI +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 108 SPRLVNLLGFSNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
P +V LL + LV E + D PL + Q+ + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKS--YLFQLLQGLAF 121
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-C 224
HS ++HRD+K N+LI+ +L DFGLA GV + T+ Y P
Sbjct: 122 CHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLWYRAPEI 177
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ ST D++S G + E+++ R
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 62 LLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPRL 111
LGKG + K V G+ V + KP + +++S E I I + +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME----ISIHRSLAHQHV 103
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V GF D+ +V+E +L + LH + L Q+ + LH
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 161
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
+IHRD+K N+ ++ + ++GDFGLA + D R + GT Y+ P ++
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYIAPEVLSKKGH 218
Query: 232 STKTDVFSFGILLLEII 248
S + DV+S G ++ ++
Sbjct: 219 SFEVDVWSIGCIMYTLL 235
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E+I
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 79 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 134
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 135 HLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 189
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ D++S G ++ E++ C K +
Sbjct: 190 VILGMGYKENVDLWSVGCIMGEMV-CHKIL 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E+I
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F TP T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E+I
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLRGR--QVAVKKPSKNQEISQEVDNEIEILSKI-HSPR 110
T+G+ ++ +G GS+ + + + + AVK K++ E EIEIL + P
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE---EIEILLRYGQHPN 77
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L +D K +V E M G L D + + + + + K VE LH++
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKI-LRQKFFSEREASAVLFTITKTVEYLHAQ- 135
Query: 171 PPIIHRDIKSANVL-IDRNFN---ARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYV 226
++HRD+K +N+L +D + N R+ DFG A + +N + P T ++ P +
Sbjct: 136 -GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT--PCYTANFVAPEVL 192
Query: 227 TPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
D++S G+LL +++ G++P
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLT-------GYTP 219
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 39/270 (14%)
Query: 63 LGKGSHGSVYKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF-- 117
L + G ++K +G + VK + S++ + E L P ++ +LG
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
S + L+ +M G+LY+VLH N ++ + ++ AL +A+ + LH+ P I
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRH 137
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK-- 234
+ S +V+ID + AR+ + + +F P P +V P+ L K
Sbjct: 138 ALNSRSVMIDEDMTARI---------SMADVKFSFQSPGRMYA---PAWVAPEALQKKPE 185
Query: 235 ------TDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
D++SF +LL E+++ ++ F+ S ++ I L P IPP
Sbjct: 186 DTNRRSADMWSFAVLLWELVTR----EVPFADLSNME-----IGMKVALEGLRPTIPPGI 236
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
P V K + + C+ +RP IV
Sbjct: 237 SPHVSKLMKI----CMNEDPAKRPKFDMIV 262
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 62 LLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPRL 111
LGKG + K V G+ V + KP + +++S E I I + +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME----ISIHRSLAHQHV 101
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V GF D+ +V+E +L + LH + L Q+ + LH
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 159
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
+IHRD+K N+ ++ + ++GDFGLA + D R + GT Y+ P ++
Sbjct: 160 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYIAPEVLSKKGH 216
Query: 232 STKTDVFSFGILLLEII 248
S + DV+S G ++ ++
Sbjct: 217 SFEVDVWSIGCIMYTLL 233
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQV--AVKK-PSKNQEISQEVDNEIEILSK 105
D E NG ++ +LGKG++G VY QV A+K+ P ++ SQ + EI +
Sbjct: 18 DYEYDENG--DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRI--RLALQVAKAV 163
+ +V LG +++ + +E + G+L +L S PL + Q+ + +
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALR-CGVDNFRFRSTPPAGTIGYL 221
+ LH I+HRDIK NVLI+ ++ DFG + R G++ T GT+ Y+
Sbjct: 136 KYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYM 190
Query: 222 DPCYVT--PDNLSTKTDVFSFGILLLEIISCR 251
P + P D++S G ++E+ + +
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 62 LLGKGSHGSVY-------KAVLRGRQVA---VKKPSKNQEISQEVDNEIEILSKIHSPRL 111
LGKG + K V G+ V + KP + +++S E I I + +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME----ISIHRSLAHQHV 77
Query: 112 VNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
V GF D+ +V+E +L + LH + L Q+ + LH
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 135
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
+IHRD+K N+ ++ + ++GDFGLA + D R + GT Y+ P ++
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYIAPEVLSKKGH 192
Query: 232 STKTDVFSFGILLLEII 248
S + DV+S G ++ ++
Sbjct: 193 SFEVDVWSIGCIMYTLL 209
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 99/193 (51%), Gaps = 15/193 (7%)
Query: 61 KLLGKGSHGSVYKAVLR--GRQVA---VKKPSKNQEISQEVDNEIEILSKIHS-PRLVNL 114
K LG+G V + + + G++ A +KK + Q+ E+ +EI +L S PR++NL
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDV-LHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
++ + +L++E+ + G ++ + L ++ IRL Q+ + V LH I
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN--NI 152
Query: 174 IHRDIKSANVLIDRNF---NARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDN 230
+H D+K N+L+ + + ++ DFG++ + G R GT YL P + D
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACELREI--MGTPEYLAPEILNYDP 209
Query: 231 LSTKTDVFSFGIL 243
++T TD+++ GI+
Sbjct: 210 ITTATDMWNIGII 222
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 34/227 (14%)
Query: 61 KLLGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIH-SPRLVNL 114
K LGKG++G V+K++ R G VAVKK +N +Q EI IL+++ +VNL
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 115 LGF--SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
L +++ +D LV ++M L+ V+ +N L + + Q+ K ++ LHS
Sbjct: 75 LNVLRADNDRDVYLVFDYMETD-LHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHS--GG 129
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLA--------------LRCGVDNFRFRSTPPAGTI 218
++HRD+K +N+L++ + ++ DFGL+ L + F P T
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 219 GYLDPCYVTPDNL--STK----TDVFSFGILLLEIISCRKAIDIGFS 259
Y P+ L STK D++S G +L EI+ C K I G S
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL-CGKPIFPGSS 235
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 46 DYSDLEAATNGFSEQKL-----LGKGSHGSVYKA--VLRGRQVAVKKP-SKNQEISQEVD 97
D SD T E +L L +G VY+A V GR+ A+K+ S +E ++ +
Sbjct: 14 DQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII 73
Query: 98 NEIEILSKIHS-PRLVNLLGFSNDSKDR-------LLVVEFMSNGTLYDVLH--SNNRPL 147
E+ + K+ P +V ++ K+ L++ + G L + L + PL
Sbjct: 74 QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPL 133
Query: 148 NWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA 199
+ +++ Q +AV+ +H + PPIIHRD+K N+L+ +L DFG A
Sbjct: 134 SCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQV--AVKK-PSKNQEISQEVDNEIEILSK 105
D E NG ++ +LGKG++G VY QV A+K+ P ++ SQ + EI +
Sbjct: 4 DYEYDENG--DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 106 IHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRI--RLALQVAKAV 163
+ +V LG +++ + +E + G+L +L S PL + Q+ + +
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALR-CGVDNFRFRSTPPAGTIGYL 221
+ LH I+HRDIK NVLI+ ++ DFG + R G++ T GT+ Y+
Sbjct: 122 KYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYM 176
Query: 222 DPCYVT--PDNLSTKTDVFSFGILLLEIISCR 251
P + P D++S G ++E+ + +
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 51 EAATNGFSEQKLLGKGSHGSV-YKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHS- 108
++ N +K+LG GS G+V ++ +GR VAVK+ + EI++L++
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRML--IDFCDIALMEIKLLTESDDH 86
Query: 109 PRLVNLLGFSNDSKDRLLVVEF-MSNGTLYDVLHSNN---RPLNWGRR---IRLALQVAK 161
P ++ + +++ DR L + + N L D++ S N L + I L Q+A
Sbjct: 87 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 162 AVEILHSEMPPIIHRDIKSANVLID-------------RNFNARLGDFGLA--LRCGVDN 206
V LHS IIHRD+K N+L+ N + DFGL L G
Sbjct: 145 GVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 207 FRFRSTPPAGTIGYLDPCYV---TPDNLSTKTDVFSFGILLLEIIS 249
FR P+GT G+ P + T L+ D+FS G + I+S
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR-------GRQVAVKKPSK-----NQEISQEVDNEIEILS 104
F K+LG G++G V+ ++R G+ A+K K + ++ E ++L
Sbjct: 56 FELLKVLGTGAYGKVF--LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 105 KI-HSPRLVNL-LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKA 162
I SP LV L F ++K L ++++++ G L+ L R +I + ++ A
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHL-ILDYINGGELFTHLSQRERFTEHEVQIYVG-EIVLA 171
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E LH II+RDIK N+L+D N + L DFGL+ D R+ GTI Y+
Sbjct: 172 LEHLHK--LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMA 228
Query: 223 PCYVTPDN--LSTKTDVFSFGILLLEIIS 249
P V + D +S G+L+ E+++
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 51 EAATNGFSEQKLLGKGSHGSV-YKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHS- 108
++ N +K+LG GS G+V ++ +GR VAVK+ + EI++L++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI--DFCDIALMEIKLLTESDDH 68
Query: 109 PRLVNLLGFSNDSKDRLLVVEF-MSNGTLYDVLHSNN---RPLNWGRR---IRLALQVAK 161
P ++ + +++ DR L + + N L D++ S N L + I L Q+A
Sbjct: 69 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 162 AVEILHSEMPPIIHRDIKSANVLID-------------RNFNARLGDFGLA--LRCGVDN 206
V LHS IIHRD+K N+L+ N + DFGL L G +
Sbjct: 127 GVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 207 FRFRSTPPAGTIGYLDPCYV-TPDNLSTK------TDVFSFGILLLEIIS 249
FR P+GT G+ P + +NL TK D+FS G + I+S
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 51 EAATNGFSEQKLLGKGSHGSV-YKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHS- 108
++ N +K+LG GS G+V ++ +GR VAVK+ + EI++L++
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRML--IDFCDIALMEIKLLTESDDH 86
Query: 109 PRLVNLLGFSNDSKDRLLVVEF-MSNGTLYDVLHSNN---RPLNWGRR---IRLALQVAK 161
P ++ + +++ DR L + + N L D++ S N L + I L Q+A
Sbjct: 87 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 162 AVEILHSEMPPIIHRDIKSANVLID-------------RNFNARLGDFGLA--LRCGVDN 206
V LHS IIHRD+K N+L+ N + DFGL L G
Sbjct: 145 GVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 207 FRFRSTPPAGTIGYLDPCYV---TPDNLSTKTDVFSFGILLLEIIS 249
FR P+GT G+ P + T L+ D+FS G + I+S
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 62 LLGKGSHGSVYKA--VLRGRQVAVKKPSKN----QEISQEVDNEIEILSKIHSPRLVNLL 115
LL K +G KA V++ Q + S + ++ +E+ NEI +L + P ++ L
Sbjct: 53 LLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112
Query: 116 GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
D K LV EF G L++ + N + + Q+ + LH I+H
Sbjct: 113 DVFEDKKYFYLVTEFYEGGELFEQI-INRHKFDECDAANIMKQILSGICYLHKH--NIVH 169
Query: 176 RDIKSANVLIDRN---FNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLS 232
RDIK N+L++ N ++ DFGL+ D ++ GT Y+ P V +
Sbjct: 170 RDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTAYYIAP-EVLKKKYN 225
Query: 233 TKTDVFSFGILLLEIISC 250
K DV+S G+++ I+ C
Sbjct: 226 EKCDVWSCGVIMY-ILLC 242
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGR-----QVAVKKPSKNQEISQEVDN---EIEILSKIHS 108
F+ ++LGKG GSV +A L+ +VAVK + S +++ E + +
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 109 PRLVNLLGFSNDSKDR------LLVVEFMSNGTLYDVLHSN-------NRPLNWGRRIRL 155
P + L+G S S+ + ++++ FM +G L+ L ++ N PL +R
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQ--TLVRF 142
Query: 156 ALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPA 215
+ +A +E L S IHRD+ + N ++ + + DFGL+ + ++ +
Sbjct: 143 MVDIACGMEYLSSR--NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 216 GTIGYLDPCYVTPDNLST-KTDVFSFGILLLEIIS 249
+ +L DNL T +DV++FG+ + EI++
Sbjct: 201 LPVKWL-ALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F P T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMEPEVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ D++S G ++ E++ C K +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV-CHKIL 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 57 FSEQKLLGKGSHGS-VYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKI-HSPRLVNL 114
F + +LG G+ G+ VY+ + R VAVK+ E D E+++L + P ++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP--ECFSFADREVQLLRESDEHPNVIRY 83
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPII 174
D + + + +E + TL + + + I L Q + LHS I+
Sbjct: 84 FCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS--LNIV 140
Query: 175 HRDIKSANVLIDR-----NFNARLGDFGLA--LRCGVDNFRFRSTPPAGTIGYLDPCYVT 227
HRD+K N+LI A + DFGL L G +F RS P GT G++ P ++
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP-GTEGWIAPEMLS 199
Query: 228 PD---NLSTKTDVFSFGILLLEIIS 249
D N + D+FS G + +IS
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 51 EAATNGFSEQKLLGKGSHGSV-YKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHS- 108
++ N +K+LG GS G+V ++ +GR VAVK+ + EI++L++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI--DFCDIALMEIKLLTESDDH 68
Query: 109 PRLVNLLGFSNDSKDRLLVVEF-MSNGTLYDVLHSNN---RPLNWGRR---IRLALQVAK 161
P ++ + +++ DR L + + N L D++ S N L + I L Q+A
Sbjct: 69 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 162 AVEILHSEMPPIIHRDIKSANVLID-------------RNFNARLGDFGLA--LRCGVDN 206
V LHS IIHRD+K N+L+ N + DFGL L G
Sbjct: 127 GVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 207 FRFRSTPPAGTIGYLDPCYV-TPDNLSTK------TDVFSFGILLLEIIS 249
FR P+GT G+ P + +NL TK D+FS G + I+S
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 13/148 (8%)
Query: 94 QEVDNEIEILSKIHSPRLVNLLGFSND-SKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGR 151
++V EI IL K+ P +V L+ +D ++D L +V E ++ G + +V +PL+ +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSEDQ 138
Query: 152 RIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
+ K +E LH + IIHRDIK +N+L+ + + ++ DFG++ + F+
Sbjct: 139 ARFYFQDLIKGIEYLHYQ--KIIHRDIKPSNLLVGEDGHIKIADFGVS-----NEFKGSD 191
Query: 212 TPPAGTIGYLDPCYVTPDNLSTKTDVFS 239
+ T+G P ++ P++LS +FS
Sbjct: 192 ALLSNTVG--TPAFMAPESLSETRKIFS 217
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPSKNQE---ISQEVDNEIEILSKIHSPRLVNLLGF 117
+G+GS+G V+K R G+ VA+KK ++++ I + EI +L ++ P LVNLL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
+ LV E+ + L++ L R + + Q +AV H IHRD
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE-LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN--CIHRD 127
Query: 178 IKSANVLIDRNFNARLGDFGLA-LRCGVDNFRFRSTPPAGTIGYLDPCYVTPD-NLSTKT 235
+K N+LI ++ +L DFG A L G ++ T Y P + D
Sbjct: 128 VKPENILITKHSVIKLCDFGFARLLTGPSDY---YDDEVATRWYRSPELLVGDTQYGPPV 184
Query: 236 DVFSFGILLLEIIS 249
DV++ G + E++S
Sbjct: 185 DVWAIGCVFAELLS 198
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 27/266 (10%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKK--PSKNQEISQEVDNEIEILSK-IHSPRLVNLLGF 117
LG+G++G V K V G+ AVK+ + N + + + +++I + + P V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 118 SNDSKDRLLVVEFMSNG--TLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
D + E Y + + + ++A+ + KA+E LHS++ +IH
Sbjct: 102 LFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIH 160
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD----NL 231
RD+K +NVLI+ + DFG++ VD+ AG Y P + P+
Sbjct: 161 RDVKPSNVLINALGQVKXCDFGISGYL-VDD--VAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 232 STKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKDPI 291
S K+D++S GI +E+ R D W P + +++ P++P K
Sbjct: 218 SVKSDIWSLGITXIELAILRFPYD---------SWGTPFQQLKQVVEEPSPQLPADK--- 265
Query: 292 VRKQLAVIAVRCVRSCRERRPSMKEI 317
+ +C++ + RP+ E+
Sbjct: 266 FSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F P T Y P
Sbjct: 141 HLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMEPEVVTRYYRAPE 195
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ D++S G ++ E++ C K +
Sbjct: 196 VILGMGYKENVDLWSVGCIMGEMV-CHKIL 224
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 29/270 (10%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+G GS+G K + G+ + K+ S + Q + +E+ +L ++ P +V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 118 SNDSKDRLL--VVEFMSNGTLYDVLHSNNRP---LNWGRRIRLALQVAKAVEILHSEMP- 171
D + L V+E+ G L V+ + L+ +R+ Q+ A++ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 172 --PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
++HRD+K ANV +D N +LGDFGLA R + F T GT Y+ P +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSFAKT-FVGTPYYMSPEQMNRM 191
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKD 289
+ + K+D++S G LL E+ + FS + A I++GK RIP
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPF-TAFSQKEL----AGKIREGKF-----RRIPYR-- 239
Query: 290 PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
+L I R + RPS++EI++
Sbjct: 240 --YSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN----EIEILSKI 106
E + F LG G+ G V K R + + + + EI + N E+++L +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNR-PLNWGRRIRLALQVAKAVEI 165
+SP +V G + + +E M G+L VL R P ++ +A V + +
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAY 129
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
L E I+HRD+K +N+L++ +L DFG++ + +D+ + GT Y+ P
Sbjct: 130 LR-EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMAPER 184
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAI 254
+ + S ++D++S G+ L+E+ R I
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 57 FSEQKLLGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPR 110
+ K +G G+ G V Y A+L R VA+KK P +NQ ++ E+ ++ ++
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 86
Query: 111 LVNLLGFSNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
++ LL K D +V+E M + L V+ L+ R L Q+ ++
Sbjct: 87 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIK 142
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
LHS IIHRD+K +N+++ + ++ DFGLA G F P T Y P
Sbjct: 143 HLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMVPFVVTRYYRAPE 197
Query: 225 YVTPDNLSTKTDVFSFGILLLEII 248
+ D++S G ++ E+I
Sbjct: 198 VILGMGYKENVDIWSVGCIMGEMI 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 35/223 (15%)
Query: 53 ATNGFSE----QKLLGKGSHGSVYKAVLR--GRQVAVK----------KPSKNQEISQEV 96
+T+GF E +++LG+G V + + + ++ AVK + QE+ +
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 97 DNEIEILSKIH-SPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRR--I 153
E++IL K+ P ++ L + LV + M G L+D L R +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRST 212
R L+V A+ L+ I+HRD+K N+L+D + N +L DFG + C +D + RS
Sbjct: 131 RALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLRSV 183
Query: 213 PPAGTIGYLDP----CYVTPDN--LSTKTDVFSFGILLLEIIS 249
GT YL P C + ++ + D++S G+++ +++
Sbjct: 184 --CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 150 GRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRF 209
G + + +Q+A+AVE LHS+ ++HRD+K +N+ + ++GDFGL D
Sbjct: 164 GVCLHIFIQIAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 210 RSTPP----------AGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEII 248
P GT Y+ P + +N S K D+FS G++L E++
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I + ++ +V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 128
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 29/270 (10%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+G GS+G K + G+ + K+ S + Q + +E+ +L ++ P +V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 118 SNDSKDRLL--VVEFMSNGTLYDVLHSNNRP---LNWGRRIRLALQVAKAVEILHSEMP- 171
D + L V+E+ G L V+ + L+ +R+ Q+ A++ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 172 --PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
++HRD+K ANV +D N +LGDFGLA D ++ GT Y+ P +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF--VGTPYYMSPEQMNRM 191
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPKD 289
+ + K+D++S G LL E+ + FS + A I++GK RIP
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPF-TAFSQKEL----AGKIREGKF-----RRIPYR-- 239
Query: 290 PIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
+L I R + RPS++EI++
Sbjct: 240 --YSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKK------PSKNQEISQEVDNEI 100
D+++ + + LG+G +VYKA + VA+KK I++ EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 101 EILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVA 160
++L ++ P ++ LL + LV +FM L ++ N+ L L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 161 KAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDN 206
+ +E LH I+HRD+K N+L+D N +L DFGLA G N
Sbjct: 123 QGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 128
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 128
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 128
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 128
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 31/271 (11%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+G GS+G K + G+ + K+ S + Q + +E+ +L ++ P +V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 118 SNDSKDRLL--VVEFMSNGTLYDVLHSNNRP---LNWGRRIRLALQVAKAVEILHSEMP- 171
D + L V+E+ G L V+ + L+ +R+ Q+ A++ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 172 --PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+K ANV +D N +LGDFGLA D +F + GT Y+ P +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF---AKEFVGTPYYMSPEQMNR 190
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
+ + K+D++S G LL E+ + FS + A I++GK RIP
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPF-TAFSQKEL----AGKIREGKF-----RRIPYR- 239
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
+L I R + RPS++EI++
Sbjct: 240 ---YSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG--ITH 128
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 48 SDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQV--AVKKPSKNQEISQEVDNEIE---- 101
S+ A + F K++GKGS G V A + +V AVK K + ++ + I
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN 90
Query: 102 -ILSKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQV 159
+L + P LV L FS + D+L V+++++ G L+ L L R A ++
Sbjct: 91 VLLKNVKHPFLVGL-HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEI 148
Query: 160 AKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPA--GT 217
A A+ LHS I++RD+K N+L+D + L DFGL C +N ST GT
Sbjct: 149 ASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGL---CK-ENIEHNSTTSTFCGT 202
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEII 248
YL P + D + G +L E++
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG--ITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 126
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 187 VDVWSCGIVLTAMLA 201
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 128
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 128
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 189 VDVWSCGIVLTAMLA 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 35/244 (14%)
Query: 57 FSEQKLLGKGSHGSVYK-----AVLRGRQVAVKKPSK-----NQEISQEVDNEIEILSKI 106
F ++LGKG +G V++ G+ A+K K N + + E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL 166
P +V+L+ L++E++S G L+ L + LA +++ A+ L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISMALGHL 137
Query: 167 HSEMPPIIHRDIKSANVLIDRNFNARLGDFGL---ALRCGVDNFRFRSTPPAGTIGYLDP 223
H + II+RD+K N++++ + +L DFGL ++ G F GTI Y+ P
Sbjct: 138 HQK--GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF-----CGTIEYMAP 190
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIISC---------RKAIDIGFS-----PPSIVDWAAP 269
+ + D +S G L+ ++++ +K ID PP + A
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARD 250
Query: 270 LIKK 273
L+KK
Sbjct: 251 LLKK 254
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 35/244 (14%)
Query: 57 FSEQKLLGKGSHGSVYK-----AVLRGRQVAVKKPSK-----NQEISQEVDNEIEILSKI 106
F ++LGKG +G V++ G+ A+K K N + + E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 107 HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL 166
P +V+L+ L++E++S G L+ L + LA +++ A+ L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISMALGHL 137
Query: 167 HSEMPPIIHRDIKSANVLIDRNFNARLGDFGL---ALRCGVDNFRFRSTPPAGTIGYLDP 223
H + II+RD+K N++++ + +L DFGL ++ G F GTI Y+ P
Sbjct: 138 HQK--GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF-----CGTIEYMAP 190
Query: 224 CYVTPDNLSTKTDVFSFGILLLEIISC---------RKAIDIGFS-----PPSIVDWAAP 269
+ + D +S G L+ ++++ +K ID PP + A
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARD 250
Query: 270 LIKK 273
L+KK
Sbjct: 251 LLKK 254
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 57 FSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEI-SQEVDNEIEILSKIHSPRLVN 113
F ++LG G+ V+ K L G+ A+K K+ ++NEI +L KI +V
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL-QVAKAVEILHSEMPP 172
L + LV++ +S G L+D + R + + L + QV AV+ LH
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRIL--ERGVYTEKDASLVIQQVLSAVKYLHEN--G 126
Query: 173 IIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
I+HRD+K N+L + N + DFGL+ ++ ST GT GY+ P +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLS---KMEQNGIMST-ACGTPGYVAPEVLAQK 182
Query: 230 NLSTKTDVFSFGIL 243
S D +S G++
Sbjct: 183 PYSKAVDCWSIGVI 196
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 35/223 (15%)
Query: 53 ATNGFSE----QKLLGKGSHGSVYKAVLR--GRQVAVK----------KPSKNQEISQEV 96
+T+GF E +++LG+G V + + + ++ AVK + QE+ +
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 97 DNEIEILSKIH-SPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRR--I 153
E++IL K+ P ++ L + LV + M G L+D L R +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRST 212
R L+V A+ L+ I+HRD+K N+L+D + N +L DFG + C +D + R
Sbjct: 131 RALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREV 183
Query: 213 PPAGTIGYLDP----CYVTPDN--LSTKTDVFSFGILLLEIIS 249
GT YL P C + ++ + D++S G+++ +++
Sbjct: 184 --CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G++G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 63 LGKGSHGSVYKAVL---RGRQVAVK-KPSKNQEISQ--EVDNEIEILSKIHS---PRLVN 113
LG GS G V + G+ V+V K K +SQ +D+ I ++ +HS L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L G ++ V E G+L D L + G R A+QVA+ + L S+
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--F 142
Query: 174 IHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNF---RFRSTPPAGTIGYLDPCYVTP 228
IHRD+ + N+L+ ++GDFGL AL D++ R P A + P
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA---------WCAP 193
Query: 229 DNLSTKT-----DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPR 283
++L T+T D + FG+ L E+ + + IG + I+ + K+G+ R
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---KIDKEGE-------R 243
Query: 284 IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
+P P+D + + + V+C E RP+ + D+L
Sbjct: 244 LPRPED--CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIE-------ILSKIH 107
F+ +LGKGS G V A +G + A+K K+ I D+++E +L+ +
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQ---DDDVECTMVEKRVLALLD 77
Query: 108 SPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEIL 166
P + L + DRL V+E+++ G L + + + + A +++ + L
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISIGLFFL 136
Query: 167 HSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYV 226
H II+RD+K NV++D + ++ DFG+ +D R GT Y+ P +
Sbjct: 137 HKR--GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREF--CGTPDYIAPEII 192
Query: 227 TPDNLSTKTDVFSFGILLLEIISCRKAID 255
D +++G+LL E+++ + D
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLRGR--QVAVKKPSKNQEISQEVDNEIEILSKI-HSPR 110
T+G+ ++ +G GS+ + + + + AVK K++ E EIEIL + P
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE---EIEILLRYGQHPN 77
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L +D K +V E G L D + + + + + K VE LH++
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKI-LRQKFFSEREASAVLFTITKTVEYLHAQ- 135
Query: 171 PPIIHRDIKSANVL-IDRNFNA---RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYV 226
++HRD+K +N+L +D + N R+ DFG A + +N + P T ++ P +
Sbjct: 136 -GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT--PCYTANFVAPEVL 192
Query: 227 TPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
D++S G+LL ++ G++P
Sbjct: 193 ERQGYDAACDIWSLGVLLYTXLT-------GYTP 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 63 LGKGSHGSVYKAVL---RGRQVAVK-KPSKNQEISQ--EVDNEIEILSKIHS---PRLVN 113
LG GS G V + G+ V+V K K +SQ +D+ I ++ +HS L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L G ++ V E G+L D L + G R A+QVA+ + L S+
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--F 136
Query: 174 IHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNF---RFRSTPPAGTIGYLDPCYVTP 228
IHRD+ + N+L+ ++GDFGL AL D++ R P A + P
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA---------WCAP 187
Query: 229 DNLSTKT-----DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPR 283
++L T+T D + FG+ L E+ + + IG + I+ + K+G+ R
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---KIDKEGE-------R 237
Query: 284 IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
+P P+D + + + V+C E RP+ + D+L
Sbjct: 238 LPRPED--CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 55 NGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVD-----NEIEILSKIH 107
+ F ++LGKGS G V A ++ G AVK K+ I Q+ D E ILS
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV-ILQDDDVECTMTEKRILSLAR 81
Query: 108 SPRLVNLLGFSNDSKDRLL-VVEFMSNGTLYDVLH-SNNRPLNWGRRIRLALQVAKAVEI 165
+ + L + DRL V+EF++ G L + H +R + R A ++ A+
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
LH + II+RD+K NVL+D + +L DFG+ + G+ N +T GT Y+ P
Sbjct: 140 LHDK--GIIYRDLKLDNVLLDHEGHCKLADFGMC-KEGICNGVTTAT-FCGTPDYIAPEI 195
Query: 226 VTPDNLSTKTDVFSFGILLLEIIS 249
+ D ++ G+LL E++
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLC 219
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
Query: 62 LLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQE--VDNEIEILSKIHSPRLVNLLGF 117
+LG G+ V A + Q VA+K +K +E ++NEI +L KI P +V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
L+++ +S G L+D + RL QV AV+ LH I+HRD
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHD--LGIVHRD 141
Query: 178 IKSANVL---IDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK 234
+K N+L +D + + DFGL+ +++ + GT GY+ P + S
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 235 TDVFSFGIL 243
D +S G++
Sbjct: 199 VDCWSIGVI 207
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 63 LGKGSHGSVYKAVL---RGRQVAVK-KPSKNQEISQ--EVDNEIEILSKIHS---PRLVN 113
LG GS G V + G+ V+V K K +SQ +D+ I ++ +HS L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L G ++ V E G+L D L + G R A+QVA+ + L S+
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--F 136
Query: 174 IHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNF---RFRSTPPAGTIGYLDPCYVTP 228
IHRD+ + N+L+ ++GDFGL AL D++ R P A + P
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA---------WCAP 187
Query: 229 DNLSTKT-----DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPR 283
++L T+T D + FG+ L E+ + + IG + I+ + K+G+ R
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---KIDKEGE-------R 237
Query: 284 IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
+P P+D + + + V+C E RP+ + D+L
Sbjct: 238 LPRPED--CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 63 LGKGSHGSVYKAVLR-GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGFS 118
+G+G++G VYKA G A+KK +++ I EI IL ++ +V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ K +LV E + L +L L LQ+ + H ++HRD+
Sbjct: 70 HTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDL 126
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPDNLSTKTDV 237
K N+LI+R ++ DFGLA G+ ++ T T+ Y P + ST D+
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 238 FSFGILLLEIIS 249
+S G + E+++
Sbjct: 185 WSVGCIFAEMVN 196
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 63 LGKGSHGSVYKAVLR-GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGFS 118
+G+G++G VYKA G A+KK +++ I EI IL ++ +V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ K +LV E + L +L L LQ+ + H ++HRD+
Sbjct: 70 HTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDL 126
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPDNLSTKTDV 237
K N+LI+R ++ DFGLA G+ ++ T T+ Y P + ST D+
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 238 FSFGILLLEIIS 249
+S G + E+++
Sbjct: 185 WSVGCIFAEMVN 196
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 62 LLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQE--VDNEIEILSKIHSPRLVNLLGF 117
+LG G+ V A + Q VA+K +K +E ++NEI +L KI P +V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
L+++ +S G L+D + RL QV AV+ LH I+HRD
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHD--LGIVHRD 141
Query: 178 IKSANVL---IDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK 234
+K N+L +D + + DFGL+ +++ + GT GY+ P + S
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 235 TDVFSFGILLLEIISC 250
D +S G++ I+ C
Sbjct: 199 VDCWSIGVIAY-ILLC 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 63 LGKGSHGSVYKAVL---RGRQVAVK-KPSKNQEISQ--EVDNEIEILSKIHS---PRLVN 113
LG GS G V + G+ V+V K K +SQ +D+ I ++ +HS L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L G ++ V E G+L D L + G R A+QVA+ + L S+
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--F 132
Query: 174 IHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNF---RFRSTPPAGTIGYLDPCYVTP 228
IHRD+ + N+L+ ++GDFGL AL D++ R P A + P
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA---------WCAP 183
Query: 229 DNLSTKT-----DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPR 283
++L T+T D + FG+ L E+ + + IG + I+ + K+G+ R
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---KIDKEGE-------R 233
Query: 284 IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
+P P+D + + + V+C E RP+ + D+L
Sbjct: 234 LPRPED--CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 47/299 (15%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQEVDNEIE 101
E N S K LG G+ G V +A G VAVK KPS + + + +E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH--------SNNRP------ 146
+LS + + +VNLLG L++ E+ G L + L S P
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 147 ---LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG 203
L+ + + QVAK + L S+ IHRD+ + N+L+ ++ DFGLA
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARHIK 219
Query: 204 VDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PS 262
D+ + ++ P + + ++DV+S+GI L E+ S +G SP P
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LGSSPYPG 273
Query: 263 I-VDWA-APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
+ VD +IK+G + P P ++ I C + +RP+ K+IV
Sbjct: 274 MPVDSKFYKMIKEG--FRMLSPEHAP-------AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
+++ + +G+G++G V A +R +VA+KK P ++Q Q EI+IL + R
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRF---RHE 101
Query: 113 NLLGFSN-------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
N++G + ++ + +V+ + LY +L S L+ Q+ + ++
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ--LSNDHICYFLYQILRGLKY 159
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGV--DNFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+LI+ + ++ DFGLA D+ F T T Y P
Sbjct: 160 IHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFL-TEXVATRWYRAP 216
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
Query: 62 LLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQE--VDNEIEILSKIHSPRLVNLLGF 117
+LG G+ V A + Q VA+K +K +E ++NEI +L KI P +V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
L+++ +S G L+D + RL QV AV+ LH I+HRD
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHD--LGIVHRD 141
Query: 178 IKSANVL---IDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK 234
+K N+L +D + + DFGL+ +++ + GT GY+ P + S
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 235 TDVFSFGIL 243
D +S G++
Sbjct: 199 VDCWSIGVI 207
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 63 LGKGSHGSVYKAVL---RGRQVAVK-KPSKNQEISQ--EVDNEIEILSKIHS---PRLVN 113
LG GS G V + G+ V+V K K +SQ +D+ I ++ +HS L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L G ++ V E G+L D L + G R A+QVA+ + L S+
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--F 132
Query: 174 IHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNF---RFRSTPPAGTIGYLDPCYVTP 228
IHRD+ + N+L+ ++GDFGL AL D++ R P A + P
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA---------WCAP 183
Query: 229 DNLSTKT-----DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPR 283
++L T+T D + FG+ L E+ + + IG + I+ + K+G+ R
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---KIDKEGE-------R 233
Query: 284 IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
+P P+D + + + V+C E RP+ + D+L
Sbjct: 234 LPRPED--CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEIS--QEVDNEIEILSKIHSPRLVNLLG 116
+ LG+G+ G V AV R + VAVK + + + + EI I ++ +V G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
+ + L +E+ S G L+D + + P +R Q+ V LH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHG--IGITH 127
Query: 176 RDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK- 234
RDIK N+L+D N ++ DFGLA +N GT+ Y+ P + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 235 TDVFSFGILLLEIIS 249
DV+S GI+L +++
Sbjct: 188 VDVWSCGIVLTAMLA 202
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 50 LEAATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEI----SQEVDNEIEIL 103
+ ++ + K LG G++G V K L G + A+K K+ S + +E+ +L
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 104 SKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYD--VLHSNNRPLNWGRRIRLALQVAK 161
++ P ++ L F D ++ LV+E G L+D +L ++ ++ QV
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QVLS 132
Query: 162 AVEILHSEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTI 218
LH I+HRD+K N+L++ R+ ++ DFGL+ V + GT
Sbjct: 133 GTTYLHKH--NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTA 187
Query: 219 GYLDPCYVTPDNLSTKTDVFSFGILLLEIISC 250
Y+ P V K DV+S G++L I+ C
Sbjct: 188 YYIAP-EVLRKKYDEKCDVWSCGVILY-ILLC 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
Query: 62 LLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQE--VDNEIEILSKIHSPRLVNLLGF 117
+LG G+ V A + Q VA+K +K +E ++NEI +L KI P +V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
L+++ +S G L+D + RL QV AV+ LH I+HRD
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHD--LGIVHRD 141
Query: 178 IKSANVL---IDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK 234
+K N+L +D + + DFGL+ +++ + GT GY+ P + S
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 235 TDVFSFGIL 243
D +S G++
Sbjct: 199 VDCWSIGVI 207
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 63 LGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQE-VDNEIEILSKIHSPRLVNLLGFSND 120
LG+G G V++ V ++ + K K + Q V EI IL+ +++L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 121 SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKS 180
++ +++ EF+S +++ ++++ LN + QV +A++ LHS I H DI+
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH--NIGHFDIRP 130
Query: 181 ANVLID--RNFNARLGDFGLA--LRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTD 236
N++ R+ ++ +FG A L+ G DNFR T P Y P D +ST TD
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPE----YYAPEVHQHDVVSTATD 185
Query: 237 VFSFGILLLEIIS 249
++S G L+ ++S
Sbjct: 186 MWSLGTLVYVLLS 198
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 63 LGKGSHGSVYKAVLR-GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGFS 118
+G+G++G VYKA G A+KK +++ I EI IL ++ +V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ K +LV E + L +L L LQ+ + H ++HRD+
Sbjct: 70 HTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDL 126
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPDNLSTKTDV 237
K N+LI+R ++ DFGLA G+ ++ T T+ Y P + ST D+
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 238 FSFGILLLEIIS 249
+S G + E+++
Sbjct: 185 WSVGCIFAEMVN 196
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 47/299 (15%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQEVDNEIE 101
E N S K LG G+ G V +A G VAVK KPS + + + +E++
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH--------SNNRP------ 146
+LS + + +VNLLG L++ E+ G L + L S P
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 147 ---LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG 203
L+ + + QVAK + L S+ IHRD+ + N+L+ ++ DFGLA
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 204 VDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PS 262
D+ + ++ P + + ++DV+S+GI L E+ S +G SP P
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LGSSPYPG 250
Query: 263 I-VDWA-APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
+ VD +IK+G + P P ++ I C + +RP+ K+IV
Sbjct: 251 MPVDSKFYKMIKEG--FRMLSPEHAP-------AEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 63 LGKGSHGSVYKAV--LRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
+G G++G V A L G+QVA+KK ++ + L + + N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 121 SKDRLLVVEFMSNGTLYDVLHSN-------NRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
+ + EF S + D++ S+ ++PL Q+ + ++ +HS +
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--V 180
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLA--LRCGVDNFRFRSTPPAGTIGYLDP-CYVTPDN 230
IHRD+K +N+L++ N ++GDFG+A L ++ T T Y P ++
Sbjct: 181 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 240
Query: 231 LSTKTDVFSFGILLLEIISCRK 252
+ D++S G + E+++ R+
Sbjct: 241 YTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 47/299 (15%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQEVDNEIE 101
E N S K LG G+ G V +A G VAVK KPS + + + +E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH--------SNNRP------ 146
+LS + + +VNLLG L++ E+ G L + L S P
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 147 ---LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG 203
L+ + + QVAK + L S+ IHRD+ + N+L+ ++ DFGLA
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARDIK 219
Query: 204 VDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PS 262
D+ + ++ P + + ++DV+S+GI L E+ S +G SP P
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LGSSPYPG 273
Query: 263 I-VDWA-APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
+ VD +IK+G + P P ++ I C + +RP+ K+IV
Sbjct: 274 MPVDSKFYKMIKEG--FRMLSPEHAP-------AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 130 FMSNGTLYDVLHSNN------RPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANV 183
F + +L DV + P+ I + QVA+ +E L S IHRD+ + N+
Sbjct: 173 FQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSR--KCIHRDLAARNI 230
Query: 184 LIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGIL 243
L+ N ++ DFGLA + R + ++ P + STK+DV+S+G+L
Sbjct: 231 LLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVL 290
Query: 244 LLEIIS 249
L EI S
Sbjct: 291 LWEIFS 296
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 47/299 (15%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQEVDNEIE 101
E N S K LG G+ G V +A G VAVK KPS + + + +E++
Sbjct: 37 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH--------SNNRP------ 146
+LS + + +VNLLG L++ E+ G L + L S P
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 147 ---LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG 203
L+ + + QVAK + L S+ IHRD+ + N+L+ ++ DFGLA
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARDIK 214
Query: 204 VDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PS 262
D+ + ++ P + + ++DV+S+GI L E+ S +G SP P
Sbjct: 215 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LGSSPYPG 268
Query: 263 I-VDWA-APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
+ VD +IK+G + P P ++ I C + +RP+ K+IV
Sbjct: 269 MPVDSKFYKMIKEG--FRMLSPEHAP-------AEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 52/292 (17%)
Query: 63 LGKGSHGSVYKAV---------LRGRQVAVKKPSK-NQEISQEVDNEIEILSKIHSPRLV 112
LG+G+ ++K V L +V +K K ++ S+ ++SK+ LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G + +LV EF+ G+L L N +N ++ +A Q+A A+ L E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL--EENT 133
Query: 173 IIHRDIKSANVLIDRNFNARLG--------DFGLALRC---GVDNFRFRSTPPAGTIGYL 221
+IH ++ + N+L+ R + + G D G+++ + R PP
Sbjct: 134 LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE------ 187
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFD 281
C P NL+ TD +SFG L EI S G P S +D + L ++
Sbjct: 188 --CIENPKNLNLATDKWSFGTTLWEICSG------GDKPLSALD-------SQRKLQFYE 232
Query: 282 PR--IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL--SKLVP 329
R +P PK +LA + C+ + RPS + I+ L L LVP
Sbjct: 233 DRHQLPAPK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 47/299 (15%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRG-------RQVAVK--KPSKNQEISQEVDNEIE 101
E N S K LG G+ G V +A G VAVK KPS + + + +E++
Sbjct: 35 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 102 ILSKI-HSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH--------SNNRP------ 146
+LS + + +VNLLG L++ E+ G L + L S P
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 147 ---LNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCG 203
L+ + + QVAK + L S+ IHRD+ + N+L+ ++ DFGLA
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARDIK 212
Query: 204 VDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP-PS 262
D+ + ++ P + + ++DV+S+GI L E+ S +G SP P
Sbjct: 213 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LGSSPYPG 266
Query: 263 I-VDWA-APLIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVD 319
+ VD +IK+G + P P ++ I C + +RP+ K+IV
Sbjct: 267 MPVDSKFYKMIKEG--FRMLSPEHAP-------AEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
AT+ + +G G++G+VYKA G VA+K P+ + + E+ +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 108 S---PRLVNLLGFSNDSK-DRLLVVEFMSNGTLYDV---LHSNNRPLNWGRRIR-LALQV 159
+ P +V L+ S+ DR + V + D+ L P I+ L Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 160 AKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG 219
+ ++ LH+ I+HRD+K N+L+ +L DFGLA + +++ P T+
Sbjct: 122 LRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLA---RIYSYQMALAPVVVTLW 176
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFS 259
Y P + +T D++S G + E+ RK + G S
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 215
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 63 LGKGSHGSVYKAV--LRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFSND 120
+G G++G V A L G+QVA+KK ++ + L + + N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 121 SKDRLLVVEFMSNGTLYDVLHSN-------NRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
+ + EF S + D++ S+ ++PL Q+ + ++ +HS +
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--V 179
Query: 174 IHRDIKSANVLIDRNFNARLGDFGLA--LRCGVDNFRFRSTPPAGTIGYLDP-CYVTPDN 230
IHRD+K +N+L++ N ++GDFG+A L ++ T T Y P ++
Sbjct: 180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 239
Query: 231 LSTKTDVFSFGILLLEIISCRK 252
+ D++S G + E+++ R+
Sbjct: 240 YTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 52/292 (17%)
Query: 63 LGKGSHGSVYKAV---------LRGRQVAVKKPSK-NQEISQEVDNEIEILSKIHSPRLV 112
LG+G+ ++K V L +V +K K ++ S+ ++SK+ LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
G + +LV EF+ G+L L N +N ++ +A Q+A A+ L E
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFL--EENT 133
Query: 173 IIHRDIKSANVLIDRNFNARLG--------DFGLALRC---GVDNFRFRSTPPAGTIGYL 221
+IH ++ + N+L+ R + + G D G+++ + R PP
Sbjct: 134 LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE------ 187
Query: 222 DPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFD 281
C P NL+ TD +SFG L EI S G P S +D + L ++
Sbjct: 188 --CIENPKNLNLATDKWSFGTTLWEICSG------GDKPLSALD-------SQRKLQFYE 232
Query: 282 PR--IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL--SKLVP 329
R +P PK +LA + C+ + RPS + I+ L L LVP
Sbjct: 233 DRHQLPAPK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 61 KLLGKGSHGSVYKAVLR--GRQVAVK-----KPSKNQEISQE-VDNEIEILSKIHSPRLV 112
+++GKG+ V + + R G+Q AVK K + + +S E + E I + P +V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 113 NLLGFSNDSKDRLLVVEFMSNGTL-YDVLHSNNRPLNWGRRI--RLALQVAKAVEILHSE 169
LL + +V EFM L ++++ + + + Q+ +A+ H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 170 MPPIIHRDIKSANVLIDRNFNA---RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYV 226
IIHRD+K NVL+ N+ +LGDFG+A++ G + GT ++ P V
Sbjct: 150 --NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG--LVAGGRVGTPHFMAPEVV 205
Query: 227 TPDNLSTKTDVFSFGILLLEIIS 249
+ DV+ G++L ++S
Sbjct: 206 KREPYGKPVDVWGCGVILFILLS 228
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRG---RQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
++ + +G+GS G V AV +G R+ A K P E EIEI+ + P ++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYD-VLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
L D+ D LV+E + G L++ V+H R R+ V AV H
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-- 126
Query: 173 IIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+ HRD+K N L + +L DFGLA R R+ GT P YV+P
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTK--VGT-----PYYVSPQ 178
Query: 230 NLS----TKTDVFSFGILLLEII 248
L + D +S G+++ ++
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLL 201
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK + + + E++I+ K+ +V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK---NRELQIMRKLDHCNIVR 77
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGT 217
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 195 FGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++A P IK VF PR PP
Sbjct: 247 IREMNPNYTEFAFPQIKAHPWTKVFRPRTPP 277
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 52/312 (16%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEI-------SQEVDNE 99
D EA + LLGKG G+V+ + QVA+K +N+ + S E
Sbjct: 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLE 84
Query: 100 IEILSKIHS----PRLVNLLGFSNDSKDRLLVVEF-MSNGTLYDVLHSNNRPLNWGRRIR 154
+ +L K+ + P ++ LL + + +LV+E + L+D + + PL G
Sbjct: 85 VALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI-TEKGPLGEGPSRC 143
Query: 155 LALQVAKAVEILHSEMPPIIHRDIKSANVLID-RNFNARLGDFGLALRCGVDNFRFRSTP 213
QV A++ HS ++HRDIK N+LID R A+L DFG + + T
Sbjct: 144 FFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY----TD 197
Query: 214 PAGTIGYLDPCYVTPDNL-STKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIK 272
GT Y P +++ + V+S GILL +++ DI F +
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG----DIPFE------------R 241
Query: 273 KGKILSV---FDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIV--DWLTGLSKL 327
+IL F + P ++R RC+ RPS++EI+ W+ ++
Sbjct: 242 DQEILEAELHFPAHVSPDCCALIR--------RCLAPKPSSRPSLEEILLDPWMQTPAED 293
Query: 328 VPLHSWNGFNNP 339
VPL+ G P
Sbjct: 294 VPLNPSKGGPAP 305
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 63 LGKGSHGSVYKAVL---RGRQVAVK-KPSKNQEISQ--EVDNEIEILSKIHS---PRLVN 113
LG GS G V + G+ V+V K K +SQ +D+ I ++ +HS L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L G ++ V E G+L D L + G R A+QVA+ + L S+
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--F 142
Query: 174 IHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNF---RFRSTPPAGTIGYLDPCYVTP 228
IHRD+ + N+L+ ++GDFGL AL D+ R P A + P
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA---------WCAP 193
Query: 229 DNLSTKT-----DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPR 283
++L T+T D + FG+ L E+ + + IG + I+ + K+G+ R
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---KIDKEGE-------R 243
Query: 284 IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
+P P+D + + + V+C E RP+ + D+L
Sbjct: 244 LPRPED--CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 63 LGKGSHGSVYKAVLRGRQ--VAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+G+G++G+V+KA R VA+K+ ++ + EI +L ++ +V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
+ K LV EF + L S N L+ Q+ K + HS ++HRD
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRD 126
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL-STKTD 236
+K N+LI+RN +L DFGLA G+ + + T+ Y P + L ST D
Sbjct: 127 LKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE--VVTLWYRPPDVLFGAKLYSTSID 184
Query: 237 VFSFGILLLEIISCRKAIDIG 257
++S G + E+ + + + G
Sbjct: 185 MWSAGCIFAELANAARPLFPG 205
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 61 KLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEI----SQEVDNEIEILSKIHSPRLVNL 114
K LG G++G V K L G + A+K K+ S + +E+ +L ++ P ++ L
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYD--VLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
F D ++ LV+E G L+D +L ++ ++ QV LH
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QVLSGTTYLHKH--N 124
Query: 173 IIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
I+HRD+K N+L++ R+ ++ DFGL+ V + GT Y+ P V
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTAYYIAP-EVLRK 180
Query: 230 NLSTKTDVFSFGILLLEIISC 250
K DV+S G++L I+ C
Sbjct: 181 KYDEKCDVWSCGVILY-ILLC 200
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRG---RQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
++ + +G+GS G V AV +G R+ A K P E EIEI+ + P ++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYD-VLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
L D+ D LV+E + G L++ V+H R R+ V AV H
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-- 143
Query: 173 IIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD 229
+ HRD+K N L + +L DFGLA R R+ GT P YV+P
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTK--VGT-----PYYVSPQ 195
Query: 230 NLS----TKTDVFSFGILLLEII 248
L + D +S G+++ ++
Sbjct: 196 VLEGLYGPECDEWSAGVMMYVLL 218
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK + + + E++I+ K+ +V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK---NRELQIMRKLDHCNIVR 77
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 186
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++A P IK VF PR PP
Sbjct: 247 IREMNPNYTEFAFPQIKAHPWTKVFRPRTPP 277
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 55 NGFSEQKLLGKGSHGSV--YKAVLRGRQVAVKKPSKNQEISQ-EVDN---EIEILSKIHS 108
+ F + +GKGS G V + + A+K +K + + + EV N E++I+ +
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P LVNL D +D +VV+ + G L L N ++ + ++ A++ L +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-ELVMALDYLQN 133
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
+ IIHRD+K N+L+D + + + DF +A + + T AGT Y+ P +
Sbjct: 134 QR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QITTMAGTKPYMAPEMFSS 188
Query: 229 DN---LSTKTDVFSFGILLLEIISCRKAIDIGFSPPS 262
S D +S G+ E++ R+ I S S
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
AT+ + +G G++G+VYKA G VA+K P+ + + E+ +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 108 S---PRLVNLLGFSNDSK-DRLLVVEFMSNGTLYDV---LHSNNRPLNWGRRIR-LALQV 159
+ P +V L+ S+ DR + V + D+ L P I+ L Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 160 AKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG 219
+ ++ LH+ I+HRD+K N+L+ +L DFGLA + +++ P T+
Sbjct: 122 LRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLA---RIYSYQMALDPVVVTLW 176
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFS 259
Y P + +T D++S G + E+ RK + G S
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIH 107
AT+ + +G G++G+VYKA G VA+K P+ + + E+ +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 108 S---PRLVNLLGFSNDSK-DRLLVVEFMSNGTLYDV---LHSNNRPLNWGRRIR-LALQV 159
+ P +V L+ S+ DR + V + D+ L P I+ L Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 160 AKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIG 219
+ ++ LH+ I+HRD+K N+L+ +L DFGLA + +++ P T+
Sbjct: 122 LRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLA---RIYSYQMALFPVVVTLW 176
Query: 220 YLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFS 259
Y P + +T D++S G + E+ RK + G S
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 215
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 35/220 (15%)
Query: 56 GFSE----QKLLGKGSHGSVYKAVLR--GRQVAVK----------KPSKNQEISQEVDNE 99
GF E +++LG+G V + + + ++ AVK + QE+ + E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 100 IEILSKIH-SPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRR--IRLA 156
++IL K+ P ++ L + LV + M G L+D L R +R
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPA 215
L+V A+ L+ I+HRD+K N+L+D + N +L DFG + C +D + R
Sbjct: 121 LEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREV--C 171
Query: 216 GTIGYLDP----CYVTPDN--LSTKTDVFSFGILLLEIIS 249
GT YL P C + ++ + D++S G+++ +++
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 63 LGKGSHGSVYKAVL---RGRQVAVK-KPSKNQEISQ--EVDNEIEILSKIHS---PRLVN 113
LG GS G V + G+ V+V K K +SQ +D+ I ++ +HS L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 114 LLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
L G ++ V E G+L D L + G R A+QVA+ + L S+
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--F 132
Query: 174 IHRDIKSANVLIDRNFNARLGDFGL--ALRCGVDNF---RFRSTPPAGTIGYLDPCYVTP 228
IHRD+ + N+L+ ++GDFGL AL D+ R P A + P
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA---------WCAP 183
Query: 229 DNLSTKT-----DVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPR 283
++L T+T D + FG+ L E+ + + IG + I+ + K+G+ R
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---KIDKEGE-------R 233
Query: 284 IPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWL 321
+P P+D + + + V+C E RP+ + D+L
Sbjct: 234 LPRPED--CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 54/270 (20%)
Query: 57 FSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V L
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 157
Query: 115 LGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVEI 165
F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGTI 218
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 217 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 274
Query: 219 GYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP----- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 275 GATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 326
Query: 261 ----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 327 REMNPNYTEFKFPQIKAHPWTKVFRPRTPP 356
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 105
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGT 217
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 165 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 222
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 223 FGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 274
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 275 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 305
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 54/270 (20%)
Query: 57 FSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V L
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 114
Query: 115 LGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVEI 165
F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGTI 218
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 174 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 231
Query: 219 GYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP----- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 232 GATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 283
Query: 261 ----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 284 REMNPNYTEFKFPQIKAHPWTKVFRPRTPP 313
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 111
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGT 217
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 171 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 228
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 229 FGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 311
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 82
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGT 217
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 142 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 199
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 200 FGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 251
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 252 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 282
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVK----KPSKNQEISQEVDNEIEI 102
++ N FS +++G+G G VY + G+ A+K K K ++ NE +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 103 LSKIHS---PRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQ 158
LS + + P +V + ++ + D+L +++ M+ G L+ L + R A +
Sbjct: 243 LSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAE 300
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTI 218
+ +E +H+ +++RD+K AN+L+D + + R+ D GLA D + + GT
Sbjct: 301 IILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTH 354
Query: 219 GYLDPCYVTPD-NLSTKTDVFSFGILLLEII 248
GY+ P + + D FS G +L +++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVK----KPSKNQEISQEVDNEIEI 102
++ N FS +++G+G G VY + G+ A+K K K ++ NE +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 103 LSKIHS---PRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQ 158
LS + + P +V + ++ + D+L +++ M+ G L+ L + R A +
Sbjct: 243 LSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAE 300
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTI 218
+ +E +H+ +++RD+K AN+L+D + + R+ D GLA D + + GT
Sbjct: 301 IILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTH 354
Query: 219 GYLDPCYVTPD-NLSTKTDVFSFGILLLEII 248
GY+ P + + D FS G +L +++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 111
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 171 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 220
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 311
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVK----KPSKNQEISQEVDNEIEI 102
++ N FS +++G+G G VY + G+ A+K K K ++ NE +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 103 LSKIHS---PRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQ 158
LS + + P +V + ++ + D+L +++ M+ G L+ L + R A +
Sbjct: 243 LSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAE 300
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTI 218
+ +E +H+ +++RD+K AN+L+D + + R+ D GLA D + + GT
Sbjct: 301 IILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTH 354
Query: 219 GYLDPCYVTPD-NLSTKTDVFSFGILLLEII 248
GY+ P + + D FS G +L +++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 54/270 (20%)
Query: 57 FSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V L
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 116
Query: 115 LGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVEI 165
F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGTI 218
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 176 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 233
Query: 219 GYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP----- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 234 GATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 285
Query: 261 ----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 286 REMNPNYTEFKFPQIKAHPWTKVFRPRTPP 315
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 89
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 149 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 198
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 258
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 259 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 289
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVY--KAVLRGRQVAVK----KPSKNQEISQEVDNEIEI 102
++ N FS +++G+G G VY + G+ A+K K K ++ NE +
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 103 LSKIHS---PRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQ 158
LS + + P +V + ++ + D+L +++ M+ G L+ L + R A +
Sbjct: 242 LSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAE 299
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTI 218
+ +E +H+ +++RD+K AN+L+D + + R+ D GLA D + + GT
Sbjct: 300 IILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTH 353
Query: 219 GYLDPCYVTPD-NLSTKTDVFSFGILLLEII 248
GY+ P + + D FS G +L +++
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 90
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGT 217
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 150 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 207
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 208 FGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 259
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 260 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 290
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 117/285 (41%), Gaps = 40/285 (14%)
Query: 61 KLLGKGSHGSVYKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+L+GKG G VY G +VA++ N++ + E+ + +V +G
Sbjct: 39 ELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
++ TLY V+ L+ + ++A ++ K + LH++ I+H+D
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK--GILHKD 155
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGV-------DNFRFRSTPPAGTIGYLDPCYV---T 227
+KS NV D N + DFGL GV D R ++ G + +L P + +
Sbjct: 156 LKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQN----GWLCHLAPEIIRQLS 210
Query: 228 PDN------LSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFD 281
PD S +DVF+ G + E+ + + P + W K + +
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHA--REWPFKTQPAEAIIWQMGTGMKPNLSQIG- 267
Query: 282 PRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGLSK 326
+ K+++ I + C +E RP+ +++D L L K
Sbjct: 268 ----------MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGT 217
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 195 FGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 89
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 149 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 198
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 258
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 259 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 289
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 81
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 141 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 190
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 250
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 251 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 281
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 85
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 145 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 194
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 254
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 255 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 285
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 96
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 156 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 205
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 265
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 266 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 296
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 186
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 186
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 78
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 138 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 187
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 247
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 248 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 278
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 61 KLLGKGSHGSVY----KAVLRGRQVAV-KKPSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
K LG G++G V K R + + +K S + + ++ E+ +L + P ++ L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 116 GFSNDSKDRLLVVEFMSNGTLYD-VLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPII 174
F D ++ LV+E G L+D ++H N + QV V LH I+
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKH--NIV 158
Query: 175 HRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
HRD+K N+L+ +++ ++ DFGL+ V + + GT Y+ P V
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKERLGTAYYIAP-EVLRKKY 214
Query: 232 STKTDVFSFGILLLEIIS 249
K DV+S G++L +++
Sbjct: 215 DEKCDVWSIGVILFILLA 232
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKK--PSKNQEISQEVDNEIEILSKIHSP 109
++ F + LLG+G++G V A + G VA+KK P + EI+IL
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 110 RLVNLLGF----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ + S ++ + + +++ + L+ V+ + + L+ Q +AV++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDDHIQYFIYQTLRAVKV 127
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG--------- 216
LH +IHRD+K +N+LI+ N + ++ DFGLA +D ++ P G
Sbjct: 128 LHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLAR--IIDESAADNSEPTGQQSGMTEXV 183
Query: 217 -TIGYLDP-CYVTPDNLSTKTDVFSFGILLLEII 248
T Y P +T S DV+S G +L E+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A + +VA+KK P ++Q Q EI+IL + R
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 101
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD LV M LY +L + + L+ Q+ + ++
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMG-ADLYKLLKTQH--LSNDHICYFLYQILRGLK 158
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 159 YIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 63 LGKGSHGSVYKAVLRGRQ--VAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+G+G++G+V+KA R VA+K+ ++ + EI +L ++ +V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
+ K LV EF + L S N L+ Q+ K + HS ++HRD
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRD 126
Query: 178 IKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL-STKTD 236
+K N+LI+RN +L +FGLA G+ + + T+ Y P + L ST D
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE--VVTLWYRPPDVLFGAKLYSTSID 184
Query: 237 VFSFGILLLEI 247
++S G + E+
Sbjct: 185 MWSAGCIFAEL 195
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKK--PSKNQEISQEVDNEIEILSKIHSP 109
++ F + LLG+G++G V A + G VA+KK P + EI+IL
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 110 RLVNLLGF----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ + S ++ + + +++ + L+ V+ + + L+ Q +AV++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDDHIQYFIYQTLRAVKV 127
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG--------- 216
LH +IHRD+K +N+LI+ N + ++ DFGLA +D ++ P G
Sbjct: 128 LHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLAR--IIDESAADNSEPTGQQSGMVEFV 183
Query: 217 -TIGYLDP-CYVTPDNLSTKTDVFSFGILLLEII 248
T Y P +T S DV+S G +L E+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKK--PSKNQEISQEVDNEIEILSKIHSP 109
++ F + LLG+G++G V A + G VA+KK P + EI+IL
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 110 RLVNLLGF----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEI 165
++ + S ++ + + +++ + L+ V+ + + L+ Q +AV++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDDHIQYFIYQTLRAVKV 127
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG--------- 216
LH +IHRD+K +N+LI+ N + ++ DFGLA +D ++ P G
Sbjct: 128 LHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLAR--IIDESAADNSEPTGQQSGMTEYV 183
Query: 217 -TIGYLDP-CYVTPDNLSTKTDVFSFGILLLEII 248
T Y P +T S DV+S G +L E+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK + + + E++I+ K+ +V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK---NRELQIMRKLDHCNIVR 77
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGVDNFRFRST----PPAGT 217
+HS I HRDIK N+L+D + +L DFG A L G N + + P
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
G D ++ DV+S G +L E++ + I + +P
Sbjct: 195 FGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 85
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 142
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 79
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 136
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 137 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 79
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 136
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 137 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRF---RHE 85
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 142
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR------GRQVAVKKPSKNQEISQEVDNEIEILSKI-HSP 109
F +++G+GS+ V L+ +V K+ + E V E + + + P
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH-SNNRPLNWGRRIRLALQVAKAVEILHS 168
LV L V+E+++ G L + H R L + +++ A+ LH
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGL---ALRCGVDNFRFRSTPPAGTIGYLDPCY 225
II+RD+K NVL+D + +L D+G+ LR G F TP Y+ P
Sbjct: 129 R--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP-----NYIAPEI 181
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDI 256
+ ++ D ++ G+L+ E+++ R DI
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 41 KIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEV-- 96
K++ DY E + + Q LG+GS G V++ + G Q AVKK + EV
Sbjct: 80 KLKPVDYEYREE-VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKK------VRLEVFR 132
Query: 97 DNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
E+ + + SPR+V L G + + +E + G+L ++ L R +
Sbjct: 133 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYL 191
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRN-FNARLGDFGLALRC----GVDNFRFRS 211
Q + +E LHS I+H D+K+ NVL+ + +A L DFG A+ C G+
Sbjct: 192 GQALEGLEYLHSRR--ILHGDVKADNVLLSSDGSHAALCDFGHAV-CLQPDGLGKSLLTG 248
Query: 212 TPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
GT ++ P V + K DV+S ++L +++
Sbjct: 249 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 86
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 143
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 144 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 87
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 144
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 145 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 78
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 135
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 136 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 85
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 142
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR------GRQVAVKKPSKNQEISQEVDNEIEILSKI-HSP 109
F +++G+GS+ V L+ +V K+ + E V E + + + P
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH-SNNRPLNWGRRIRLALQVAKAVEILHS 168
LV L V+E+++ G L + H R L + +++ A+ LH
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLA---LRCGVDNFRFRSTPPAGTIGYLDPCY 225
II+RD+K NVL+D + +L D+G+ LR G F TP Y+ P
Sbjct: 140 R--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP-----NYIAPEI 192
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDI 256
+ ++ D ++ G+L+ E+++ R DI
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR------GRQVAVKKPSKNQEISQEVDNEIEILSKI-HSP 109
F +++G+GS+ V L+ +V K+ + E V E + + + P
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH-SNNRPLNWGRRIRLALQVAKAVEILHS 168
LV L V+E+++ G L + H R L + +++ A+ LH
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLA---LRCGVDNFRFRSTPPAGTIGYLDPCY 225
II+RD+K NVL+D + +L D+G+ LR G F TP Y+ P
Sbjct: 125 R--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP-----NYIAPEI 177
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDI 256
+ ++ D ++ G+L+ E+++ R DI
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 24/220 (10%)
Query: 41 KIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEV-- 96
K++ DY E + + Q LG+GS G V++ + G Q AVKK + EV
Sbjct: 61 KLKPVDYEYREE-VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKK------VRLEVFR 113
Query: 97 DNEIEILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
E+ + + SPR+V L G + + +E + G+L ++ L R +
Sbjct: 114 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYL 172
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRN-FNARLGDFGLALRC------GVDNFRF 209
Q + +E LHS I+H D+K+ NVL+ + +A L DFG A+ C G D
Sbjct: 173 GQALEGLEYLHSRR--ILHGDVKADNVLLSSDGSHAALCDFGHAV-CLQPDGLGKDLLTG 229
Query: 210 RSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
P GT ++ P V + K DV+S ++L +++
Sbjct: 230 DYIP--GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 63 LGKGSHGSVYKAV-LR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHS---PRLVN 113
+G+G++G V+KA L+ GR VA+K+ + + + E+ +L + + P +V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 114 LLGFSN----DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR-LALQVAKAVEILHS 168
L D + +L +V + L L P I+ + Q+ + ++ LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+K N+L+ + +L DFGLA + +F+ T T+ Y P +
Sbjct: 139 HR--VVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSV 279
+ +T D++S G + E+ RK + F S VD + GKIL V
Sbjct: 194 SSYATPVDLWSVGCIFAEMFR-RKPL---FRGSSDVD------QLGKILDV 234
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR------GRQVAVKKPSKNQEISQEVDNEIEILSKI-HSP 109
F +++G+GS+ V L+ +V K+ + E V E + + + P
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLH-SNNRPLNWGRRIRLALQVAKAVEILHS 168
LV L V+E+++ G L + H R L + +++ A+ LH
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGL---ALRCGVDNFRFRSTPPAGTIGYLDPCY 225
II+RD+K NVL+D + +L D+G+ LR G F TP Y+ P
Sbjct: 172 R--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP-----NYIAPEI 224
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDI 256
+ ++ D ++ G+L+ E+++ R DI
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR--GRQVAVK----KPSKNQEISQEVDNEIEILSKIHSPR 110
F ++ LG G+ V A + G+ AVK K K +E S ++NEI +L KI
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS--IENEIAVLRKIKHEN 81
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR-----LALQVAKAVEI 165
+V L LV++ +S G L+D R + G L QV AV
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFD------RIVEKGFYTEKDASTLIRQVLDAVYY 135
Query: 166 LHSEMPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
LH I+HRD+K N+L D + DFGL+ G + + GT GY+
Sbjct: 136 LHR--MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVM---STACGTPGYVA 190
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISC 250
P + S D +S G++ I+ C
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAY-ILLC 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 62 LLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSK-----IHSPRLVNLL 115
+LGKGS G V + +G ++ K K + Q+ D E ++ K P + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 116 GFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPII 174
+ DRL V+E+++ G L + R + A ++A + L S+ II
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSKG--II 464
Query: 175 HRDIKSANVLIDRNFNARLGDFGLA---LRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
+RD+K NV++D + ++ DFG+ + GV F TP Y+ P +
Sbjct: 465 YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP-----DYIAPEIIAYQPY 519
Query: 232 STKTDVFSFGILLLEIIS 249
D ++FG+LL E+++
Sbjct: 520 GKSVDWWAFGVLLYEMLA 537
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 46 DYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVD-----NEI 100
D S+ +A ++ F + LG+G+ VY R +Q +KP + + + VD EI
Sbjct: 44 DGSNRDALSDFFEVESELGRGATSIVY----RCKQKGTQKPYALKVLKKTVDKKIVRTEI 99
Query: 101 EILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRR--IRLALQ 158
+L ++ P ++ L + LV+E ++ G L+D + + R Q
Sbjct: 100 GVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQ 156
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPA 215
+ +AV LH I+HRD+K N+L + ++ DFGL+ + +
Sbjct: 157 ILEAVAYLHEN--GIVHRDLKPENLLYATPAPDAPLKIADFGLS---KIVEHQVLMKTVC 211
Query: 216 GTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
GT GY P + + D++S GI+ I+ C GF P
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITY-ILLC------GFEP 249
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 108/270 (40%), Gaps = 39/270 (14%)
Query: 63 LGKGSHGSVYKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF-- 117
L + G ++K +G + VK + S++ + E L P ++ +LG
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
S + L+ + G+LY+VLH N ++ + ++ AL A+ LH+ P I
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRH 137
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK-- 234
+ S +V ID + AR+ + F F+S P P +V P+ L K
Sbjct: 138 ALNSRSVXIDEDXTARISXADV-------KFSFQS--PGRXYA---PAWVAPEALQKKPE 185
Query: 235 ------TDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSVFDPRIPPPK 288
D +SF +LL E+++ ++ F+ D + I L P IPP
Sbjct: 186 DTNRRSADXWSFAVLLWELVTR----EVPFA-----DLSNXEIGXKVALEGLRPTIPPGI 236
Query: 289 DPIVRKQLAVIAVRCVRSCRERRPSMKEIV 318
P V K + C +RP IV
Sbjct: 237 SPHVSKLXKI----CXNEDPAKRPKFDXIV 262
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 56 GFSEQKLLGKGSHGSVYKAVL--RGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVN 113
+++ K++G GS G VY+A L G VA+KK +++ + E++I+ K+ +V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 114 LLGF---SNDSKDRL---LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLAL---QVAKAVE 164
L F S + KD + LV++++ T+Y V +R I + L Q+ +++
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
+HS I HRDIK N+L+D + +L DFG A + R P I
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL------VRGEPNVSXI--CSR 186
Query: 224 CYVTPD------NLSTKTDVFSFGILLLEII-------------SCRKAIDIGFSP---- 260
Y P+ + ++ DV+S G +L E++ + I + +P
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 261 -----PSIVDWAAPLIKKGKILSVFDPRIPP 286
P+ ++ P IK VF PR PP
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 30/211 (14%)
Query: 63 LGKGSHGSVYKAV--LRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHSPRLVNLLGF 117
LGKG+ V + V L G++ A K + + + Q+++ E I + P +V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 118 SNDSKDRLLVVEFMSNGTLYD--VLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIH 175
++ L+ + ++ G L++ V + I+ L+ +LH ++H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA-----VLHCHQMGVVH 144
Query: 176 RDIKSANVLIDRNFN---ARLGDFGLALRCGVDN---FRFRSTPPAGTIGYLDPCYVTPD 229
RD+K N+L+ +L DFGLA+ + F F AGT GYL P + D
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF-----AGTPGYLSPEVLRKD 199
Query: 230 NLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
D+++ G++L ++ +G+ P
Sbjct: 200 PYGKPVDLWACGVILYILL-------VGYPP 223
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 62 LLGKGSHGSVYKAVLRGR-QVAVKKPSKNQEISQEVDNEIEILSK-----IHSPRLVNLL 115
+LGKGS G V + +G ++ K K + Q+ D E ++ K P + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 116 GFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPII 174
+ DRL V+E+++ G L + R + A ++A + L S+ II
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSK--GII 143
Query: 175 HRDIKSANVLIDRNFNARLGDFGLA---LRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
+RD+K NV++D + ++ DFG+ + GV F TP Y+ P +
Sbjct: 144 YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP-----DYIAPEIIAYQPY 198
Query: 232 STKTDVFSFGILLLEIIS 249
D ++FG+LL E+++
Sbjct: 199 GKSVDWWAFGVLLYEMLA 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 63 LGKGSHGSVYKAV-LR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHS---PRLVN 113
+G+G++G V+KA L+ GR VA+K+ + + + E+ +L + + P +V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 114 LLGFSN----DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR-LALQVAKAVEILHS 168
L D + +L +V + L L P I+ + Q+ + ++ LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+K N+L+ + +L DFGLA + +F+ T T+ Y P +
Sbjct: 139 HR--VVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSV 279
+ +T D++S G + E+ RK + F S VD + GKIL V
Sbjct: 194 SSYATPVDLWSVGCIFAEMFR-RKPL---FRGSSDVD------QLGKILDV 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 63 LGKGSHGSVYKAV-LR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHS---PRLVN 113
+G+G++G V+KA L+ GR VA+K+ + + + E+ +L + + P +V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 114 LLGFSN----DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR-LALQVAKAVEILHS 168
L D + +L +V + L L P I+ + Q+ + ++ LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTP 228
++HRD+K N+L+ + +L DFGLA + +F+ T T+ Y P +
Sbjct: 139 HR--VVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 229 DNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKILSV 279
+ +T D++S G + E+ RK + F S VD + GKIL V
Sbjct: 194 SSYATPVDLWSVGCIFAEMFR-RKPL---FRGSSDVD------QLGKILDV 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 85
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + L+ Q+ + ++
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKCQH--LSNDHICYFLYQILRGLK 142
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 41 KIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEI 100
K++ DY E + + Q LG+GS G V++ ++ +Q + K + E+
Sbjct: 59 KLKPVDYEYREE-VHWMTHQPRLGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEEL 115
Query: 101 EILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVA 160
+ + SPR+V L G + + +E + G+L ++ L R + Q
Sbjct: 116 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQAL 174
Query: 161 KAVEILHSEMPPIIHRDIKSANVLIDRNFN-ARLGDFGLALRC----GVDNFRFRSTPPA 215
+ +E LH+ I+H D+K+ NVL+ + + A L DFG AL C G+
Sbjct: 175 EGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHAL-CLQPDGLGKSLLTGDYIP 231
Query: 216 GTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
GT ++ P V K D++S ++L +++
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 265
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 22/223 (9%)
Query: 53 ATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKK------PSKNQEISQEVDNEIEILS 104
AT+ + +G G++G+VYKA G VA+K + E+ +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 105 KIHS---PRLVNLLGFSNDSK-DRLLVVEFMSNGTLYDV---LHSNNRPLNWGRRIR-LA 156
++ + P +V L+ S+ DR + V + D+ L P I+ L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 157 LQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG 216
Q + ++ LH+ I+HRD+K N+L+ +L DFGLA + +++ TP
Sbjct: 127 RQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLA---RIYSYQMALTPVVV 181
Query: 217 TIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFS 259
T+ Y P + +T D++S G + E+ RK + G S
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 223
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEIS---QEVDNEIEILSKIHS 108
++ + ++ LGKG+ V + V + G + A K + + + Q+++ E I K+
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P +V L + LV + ++ G L++ + + + Q+ +++ HS
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHS 122
Query: 169 EMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
I+HR++K N+L+ + +L DFGLA+ D+ + AGT GYL P
Sbjct: 123 N--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGF--AGTPGYLSPEV 177
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
+ D S D+++ G++L ++ +G+ P
Sbjct: 178 LKKDPYSKPVDIWACGVILYILL-------VGYPP 205
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A + +VA+KK P ++Q Q EI+IL + R
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 101
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 158
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 159 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 162 AVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYL 221
A+ LHS+ ++H D+K AN+ + +LGDFGL + G T AG +
Sbjct: 169 ALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELG--------TAGAGEVQEG 218
Query: 222 DPCYVTPDNLS----TKTDVFSFGILLLEI 247
DP Y+ P+ L T DVFS G+ +LE+
Sbjct: 219 DPRYMAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A + +VA+KK P ++Q Q EI+IL + R
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 83
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 141 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 57 FSEQKLLGKGSHG---SVYKAVLRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRL 111
++ +G+G++G S Y V + R VA+KK P ++Q Q EI+IL + R
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRF---RH 80
Query: 112 VNLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
N++G ++ KD +V + M LY +L + + L+ Q+ + +
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLD 222
+ +HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y
Sbjct: 138 KYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 223 PCYVTPDNLSTKT-DVFSFGILLLEIISCR 251
P + TK+ D++S G +L E++S R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA++K P ++Q Q EI+IL + R
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRF---RHE 85
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 142
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 57 FSEQKLLGKGSHG---SVYKAVLRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRL 111
++ +G+G++G S Y V + R VA+KK P ++Q Q EI+IL + R
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRF---RH 80
Query: 112 VNLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAV 163
N++G ++ KD +V + M LY +L + + L+ Q+ + +
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 164 EILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLD 222
+ +HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y
Sbjct: 138 KYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 223 PCYVTPDNLSTKT-DVFSFGILLLEIISCR 251
P + TK+ D++S G +L E++S R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A + +VA+KK P ++Q Q EI+IL + R
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 81
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 138
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 139 YIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEIS---QEVDNEIEILSKIHS 108
++ + ++ LGKG+ V + V + G + A K + + + Q+++ E I K+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P +V L + LV + ++ G L++ + + + Q+ +++ HS
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHS 123
Query: 169 EMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
I+HR++K N+L+ + +L DFGLA+ D+ + AGT GYL P
Sbjct: 124 N--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGF--AGTPGYLSPEV 178
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
+ D S D+++ G++L ++ +G+ P
Sbjct: 179 LKKDPYSKPVDIWACGVILYILL-------VGYPP 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEIS---QEVDNEIEILSKIHS 108
++ + ++ LGKG+ V + V + G + A K + + + Q+++ E I K+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P +V L + LV + ++ G L++ + + + Q+ +++ HS
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHS 123
Query: 169 EMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
I+HR++K N+L+ + +L DFGLA+ D+ + AGT GYL P
Sbjct: 124 N--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGF--AGTPGYLSPEV 178
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
+ D S D+++ G++L ++ +G+ P
Sbjct: 179 LKKDPYSKPVDIWACGVILYILL-------VGYPP 206
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A + +VA+KK P ++Q Q EI+IL + R
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 89
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 146
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 147 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A + +VA+KK P ++Q Q EI+IL + R
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 81
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 138
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 139 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A + +VA+KK P ++Q Q EI+IL + R
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 81
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 138
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 139 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 59 EQKLLGKGSHGSVYKAV--LRGRQVAVKKPSKNQ-EISQEVDNEIEILSKIHSPRLVNLL 115
++ +LG+G+H V + + ++ AVK K I V E+E+L + R V L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 116 GFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPII 174
+ +DR LV E M G++ +H R N + VA A++ LH++ I
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNK--GIA 133
Query: 175 HRDIKSANVLIDRNFN---ARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC----YVT 227
HRD+K N+L + ++ DFGL ++ P T L PC Y+
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNG----DCSPISTPELLTPCGSAEYMA 189
Query: 228 PDNLST----------KTDVFSFGILLLEIIS 249
P+ + + D++S G++L ++S
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEIS---QEVDNEIEILSKIHS 108
++ + ++ LGKG+ V + V + G + A K + + + Q+++ E I K+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P +V L + LV + ++ G L++ + + + Q+ +++ HS
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHS 146
Query: 169 EMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
I+HR++K N+L+ + +L DFGLA+ D+ + AGT GYL P
Sbjct: 147 N--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGF--AGTPGYLSPEV 201
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
+ D S D+++ G++L ++ +G+ P
Sbjct: 202 LKKDPYSKPVDIWACGVILYILL-------VGYPP 229
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 65/240 (27%)
Query: 63 LGKGSHGSVYKAVLRG----RQVAVKKPSKNQEIS----QEVDNEIEILSKIHSPRLVNL 114
+G+GS+G V A+ R + + +K ++I+ + + E+ ++ K+H P + L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDVL---------------------------------- 140
D + LV+E G L D L
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 141 -HSNNRPLNWGRRIRL----ALQVAKAVEILHSEMPPIIHRDIKSANVLIDRN--FNARL 193
H L++ +R +L Q+ A+ LH++ I HRDIK N L N F +L
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ--GICHRDIKPENFLFSTNKSFEIKL 211
Query: 194 GDFGLALR-CGVDNFRFRS-TPPAGTIGYLDPCYVTPDNLST-------KTDVFSFGILL 244
DFGL+ ++N + T AGT P +V P+ L+T K D +S G+LL
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGT-----PYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 85
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 142
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T Y P
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 43 QHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDNEI 100
QH+D DL+ K LG+GS K V + + AVK SK E + + +
Sbjct: 8 QHYDL-DLK--------DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITA 58
Query: 101 EILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVA 160
L + H P +V L +D LV+E ++ G L++ + + + + ++
Sbjct: 59 LKLCEGH-PNIVKLHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASYIMRKLV 116
Query: 161 KAVEILHSEMPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGT 217
AV +H ++HRD+K N+L + N ++ DFG A DN ++ P T
Sbjct: 117 SAVSHMHD--VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--PCFT 172
Query: 218 IGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
+ Y P + + D++S G++L ++S
Sbjct: 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLS 204
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A L +VA+KK P ++Q Q EI+IL + R
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF---RHE 86
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 143
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T Y P
Sbjct: 144 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 33/231 (14%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDN----EIEILSKIHSPRLVNLLG 116
LG G G V + + + G QVA+K+ QE+S + EI+I+ K++ P +V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 117 FSNDSKDR------LLVVEFMSNGTLYDVLHS--NNRPLNWGRRIRLALQVAKAVEILHS 168
+ + LL +E+ G L L+ N L G L ++ A+ LH
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 169 EMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
IIHRD+K N+++ + ++ D G A T GT+ YL P
Sbjct: 140 NR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPEL 194
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI 276
+ + D +SFG L E I+ GF P + +W P+ GK+
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECIT-------GFR-PFLPNW-QPVQWHGKV 236
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 41 KIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEI 100
K++ DY E + + Q +G+GS G V++ ++ +Q + K + E+
Sbjct: 45 KLKPVDYEYREE-VHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEEL 101
Query: 101 EILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVA 160
+ + SPR+V L G + + +E + G+L ++ L R + Q
Sbjct: 102 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQAL 160
Query: 161 KAVEILHSEMPPIIHRDIKSANVLIDRNFN-ARLGDFGLALRC----GVDNFRFRSTPPA 215
+ +E LH+ I+H D+K+ NVL+ + + A L DFG AL C G+
Sbjct: 161 EGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHAL-CLQPDGLGKSLLTGDYIP 217
Query: 216 GTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
GT ++ P V K D++S ++L +++
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 251
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 33/231 (14%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDN----EIEILSKIHSPRLVNLLG 116
LG G G V + + + G QVA+K+ QE+S + EI+I+ K++ P +V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 117 FSNDSKDR------LLVVEFMSNGTLYDVLHS--NNRPLNWGRRIRLALQVAKAVEILHS 168
+ + LL +E+ G L L+ N L G L ++ A+ LH
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 169 EMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCY 225
IIHRD+K N+++ + ++ D G A T GT+ YL P
Sbjct: 141 NR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPEL 195
Query: 226 VTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSPPSIVDWAAPLIKKGKI 276
+ + D +SFG L E I+ GF P + +W P+ GK+
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECIT-------GFR-PFLPNW-QPVQWHGKV 237
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 35/240 (14%)
Query: 52 AATNGFSEQKL-----LGKGSHGSVYKAV--LRGRQVAVKKPSKNQEISQ---------E 95
AA G QK LG G+ G V+ AV + ++V VK K + + +
Sbjct: 16 AACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK 75
Query: 96 VDNEIEILSKIHSPRLVNLLG-FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR 154
V EI ILS++ ++ +L F N +L++ + S L+ + + R L+
Sbjct: 76 VTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASY 134
Query: 155 LALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA--LRCGVDNFRFRST 212
+ Q+ AV L + IIHRDIK N++I +F +L DFG A L G + F
Sbjct: 135 IFRQLVSAVGYLR--LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF--- 189
Query: 213 PPAGTIGYLDPCYVTPDNL-STKTDVFSFGILLLEII-------SCRKAIDIGFSPPSIV 264
GTI Y P + + + +++S G+ L ++ + ++ PP +V
Sbjct: 190 --CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLV 247
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 41 KIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEI 100
K++ DY E + + Q +G+GS G V++ ++ +Q + K + E+
Sbjct: 61 KLKPVDYEYREE-VHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEEL 117
Query: 101 EILSKIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVA 160
+ + SPR+V L G + + +E + G+L ++ L R + Q
Sbjct: 118 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQAL 176
Query: 161 KAVEILHSEMPPIIHRDIKSANVLIDRNFN-ARLGDFGLALRC----GVDNFRFRSTPPA 215
+ +E LH+ I+H D+K+ NVL+ + + A L DFG AL C G+
Sbjct: 177 EGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHAL-CLQPDGLGKSLLTGDYIP 233
Query: 216 GTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIIS 249
GT ++ P V K D++S ++L +++
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 267
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A + +VA+KK P ++Q Q EI+IL R
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAF---RHE 83
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 141 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 61 KLLGKGSHGSVYKAV--LRGRQVAVKKPSKNQEISQE-VDNEIEILSKIHSPR-LVNLLG 116
+LLG+G++ V AV G++ AVK K S+ V E+E L + + ++ L+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
F D LV E + G++ + + N R+ VA A++ LH++ I HR
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQ-KQKHFNEREASRVVRDVAAALDFLHTK--GIAHR 135
Query: 177 DIKSANVLI---DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC----YVTPD 229
D+K N+L ++ ++ DF L ++N S P T PC Y+ P+
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGSGMKLNN----SCTPITTPELTTPCGSAEYMAPE 191
Query: 230 NLSTKTDVFSF 240
+ TD +F
Sbjct: 192 VVEVFTDQATF 202
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKK--PSKNQEISQEVDNEIEILSKIHSPRLV 112
++ +G+G++G V A + +VA+KK P ++Q Q EI+IL R
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAF---RHE 83
Query: 113 NLLGFSN--------DSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVE 164
N++G ++ KD +V + M LY +L + + L+ Q+ + ++
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETD-LYKLLKTQH--LSNDHICYFLYQILRGLK 140
Query: 165 ILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVD-NFRFRSTPPAGTIGYLDP 223
+HS ++HRD+K +N+L++ + ++ DFGLA D + T T Y P
Sbjct: 141 YIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 224 CYVTPDNLSTKT-DVFSFGILLLEIISCR 251
+ TK+ D++S G +L E++S R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST 212
I + QVAK +E L S IHRD+ + N+L+ ++ DFGLA D R
Sbjct: 194 ICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 251
Query: 213 PPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP---PSIVDWAAP 269
+ ++ P + + ++DV+SFG+LL EI S +G SP I +
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYPGVKIDEEFCR 305
Query: 270 LIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+K+G + D P ++ + C +RP+ E+V+ L L
Sbjct: 306 RLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST 212
I + QVAK +E L S IHRD+ + N+L+ ++ DFGLA D R
Sbjct: 203 ICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 260
Query: 213 PPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP---PSIVDWAAP 269
+ ++ P + + ++DV+SFG+LL EI S +G SP I +
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYPGVKIDEEFCR 314
Query: 270 LIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+K+G + D P ++ + C +RP+ E+V+ L L
Sbjct: 315 RLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST 212
I + QVAK +E L S IHRD+ + N+L+ ++ DFGLA D R
Sbjct: 201 ICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 258
Query: 213 PPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP---PSIVDWAAP 269
+ ++ P + + ++DV+SFG+LL EI S +G SP I +
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYPGVKIDEEFCR 312
Query: 270 LIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+K+G + D P ++ + C +RP+ E+V+ L L
Sbjct: 313 RLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST 212
I + QVAK +E L S IHRD+ + N+L+ ++ DFGLA D R
Sbjct: 196 ICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 253
Query: 213 PPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP---PSIVDWAAP 269
+ ++ P + + ++DV+SFG+LL EI S +G SP I +
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYPGVKIDEEFCR 307
Query: 270 LIKKGKILSVFDPRIPPPKDPIVRKQLAVIAVRCVRSCRERRPSMKEIVDWLTGL 324
+K+G + D P ++ + C +RP+ E+V+ L L
Sbjct: 308 RLKEGTRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 61 KLLGKGSHGSVYKAVLRGR-----QVAVKKPSKNQEISQEVD---NEIEILSKIHSPRLV 112
K+LG+G GSV + L+ +VAVK + +E++ +E + P ++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 113 NLLGFSNDSKDR-----LLVVEFMSNG-----TLYDVLHSNNRPLNWGRRIRLALQVAKA 162
LLG + + ++++ FM G LY L + + + ++ + +A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLD 222
+E L + +HRD+ + N ++ + + DFGL+ + ++ +R G I +
Sbjct: 160 MEYLSNR--NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY-YRQ----GRIAKMP 212
Query: 223 PCYVTPDNL-----STKTDVFSFGILLLEIIS 249
++ ++L ++K+DV++FG+ + EI +
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 63 LGKGSHGSVYKAV--LRGRQVA-----VKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL 115
LGKG+ V + V L G++ A KK S Q+++ E I + P +V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDH--QKLEREARICRLLKHPNIVRLH 76
Query: 116 GFSNDSKDRLLVVEFMSNGTLYD--VLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPI 173
++ L+ + ++ G L++ V + I+ L+ +LH +
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA-----VLHCHQMGV 131
Query: 174 IHRDIKSANVLIDRNFN---ARLGDFGLALRCGVDN---FRFRSTPPAGTIGYLDPCYVT 227
+HR++K N+L+ +L DFGLA+ + F F AGT GYL P +
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF-----AGTPGYLSPEVLR 186
Query: 228 PDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
D D+++ G++L ++ +G+ P
Sbjct: 187 KDPYGKPVDLWACGVILYILL-------VGYPP 212
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 63 LGKGSHGSVYKAV--LRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLG- 116
+G G++G+V AV G +VA+KK P +++ ++ E+ +L + ++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 117 FS-----NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
F+ +D D LV+ FM GT L + + L R L Q+ K + +H+
Sbjct: 93 FTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEK-LGEDRIQFLVYQMLKGLRYIHA--A 147
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNL 231
IIHRD+K N+ ++ + ++ DFGLA + + T Y P +
Sbjct: 148 GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVILNWMR 202
Query: 232 STKT-DVFSFGILLLEIISCR 251
T+T D++S G ++ E+I+ +
Sbjct: 203 YTQTVDIWSVGCIMAEMITGK 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 54 TNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHS 108
T+ + + LGKG+ V + + G++ A K + + + Q+++ E I +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P +V L ++ LV + ++ G L++ + + + Q+ ++V H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIQQILESVN--HC 119
Query: 169 EMPPIIHRDIKSANVLI---DRNFNARLGDFGLALRCGVDN---FRFRSTPPAGTIGYLD 222
+ I+HRD+K N+L+ + +L DFGLA+ D F F AGT GYL
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF-----AGTPGYLS 174
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
P + D D+++ G++L ++ +G+ P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILL-------VGYPP 205
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 59 EQKLLGKGSHGSVYKAV--LRGRQVAVKKPSKNQ-EISQEVDNEIEILSKIHSPRLVNLL 115
++ +LG+G+H V + + ++ AVK K I V E+E+L + R V L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 116 GFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPII 174
+ +DR LV E M G++ +H R N + VA A++ LH++ I
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNK--GIA 133
Query: 175 HRDIKSANVLIDRNFN---ARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC----YVT 227
HRD+K N+L + ++ DF L ++ P T L PC Y+
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG----DCSPISTPELLTPCGSAEYMA 189
Query: 228 PDNLST----------KTDVFSFGILLLEIIS 249
P+ + + D++S G++L ++S
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 149/360 (41%), Gaps = 84/360 (23%)
Query: 40 IKIQHFDYSDLEAATNGFSEQKLLGKGSHGSVYKA-VLRGRQVAVKKPSKNQEISQEVDN 98
IK+ D E ++ K++G GS G V++A ++ +VA+KK +++ +
Sbjct: 25 IKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK---NR 81
Query: 99 EIEILSKIHSPRLVNLLGF---SNDSKDRL---LVVEFMSNGTLYDVLH----SNNRPLN 148
E++I+ + P +V+L F + D KD + LV+E++ H P+
Sbjct: 82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML 141
Query: 149 WGRRIRLAL-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA--LRCGV 204
I+L + Q+ +++ +HS I HRDIK N+L+D +L DFG A L G
Sbjct: 142 L---IKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196
Query: 205 DNF-----RFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEIISCR-------- 251
N R+ P N +T D++S G ++ E++ +
Sbjct: 197 PNVSXICSRYYRAP---------ELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247
Query: 252 -----KAIDIGFSP---------PSIVDWAAPLIKKGKILSVFDPRIPPPKDPIVRK--- 294
+ I + +P P+ ++ P I+ VF PR PP ++ +
Sbjct: 248 IDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLE 307
Query: 295 -----QLAVIAVRC------VRSCRERRPSMKE---IVDWLTG--------LSKLVPLHS 332
+L I C +R+ R P+ +E + +W +S+LVP H+
Sbjct: 308 YTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEELSVRPDLISRLVPQHA 367
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHSPRLVNLLGF 117
LGKG+ V + + G++ A K + + + Q+++ E I + P +V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRD 177
++ LV + ++ G L++ + + + Q+ ++V H + I+HRD
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIQQILESVN--HCHLNGIVHRD 128
Query: 178 IKSANVLI---DRNFNARLGDFGLALRCGVDN---FRFRSTPPAGTIGYLDPCYVTPDNL 231
+K N+L+ + +L DFGLA+ D F F AGT GYL P + D
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF-----AGTPGYLSPEVLRKDPY 183
Query: 232 STKTDVFSFGILLLEIISCRKAIDIGFSP 260
D+++ G++L ++ +G+ P
Sbjct: 184 GKPVDMWACGVILYILL-------VGYPP 205
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 42/218 (19%)
Query: 57 FSEQKLLGKGSHGSVY--KAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNL 114
F +++ G+G+ G+V K G VA+KK ++ ++ L+ +H P +V L
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 115 LGF-----SNDSKDRLL--VVEFMSNGTLYDVLHSNNRPLNWGRR--------IRLAL-Q 158
+ D +D L V+E++ D LH R N+ RR I++ L Q
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCR--NYYRRQVAPPPILIKVFLFQ 137
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDR-NFNARLGDFGLALRCGVDNFRFRSTPPAGT 217
+ +++ LH + HRDIK NVL++ + +L DFG A + +P
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL---------SPSEPN 188
Query: 218 IGYLDPCYVTPDNL-------STKTDVFSFGILLLEII 248
+ Y+ Y L +T D++S G + E++
Sbjct: 189 VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLRG-RQVAVKKPSKNQEIS----QEVDNEIEILSKIHS 108
T+ + + LGKG+ V + V + Q K +++S Q+++ E I +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
P +V L ++ LV + ++ G L++ + + + Q+ ++V +H
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIHQILESVNHIHQ 148
Query: 169 EMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDN---FRFRSTPPAGTIGYLD 222
I+HRD+K N+L+ + +L DFGLA+ + F F AGT GYL
Sbjct: 149 H--DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGF-----AGTPGYLS 201
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
P + D D+++ G++L ++ +G+ P
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILL-------VGYPP 232
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 30/211 (14%)
Query: 57 FSEQKLLGKGSHGSVYKAVLR-GRQVAVKKPSKNQEISQEVDN-----EIEILSKIHSPR 110
F K++G+G+ G V L+ +V K E+ + + E ++L S
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVL--HSNNRPLNWGRRIRLALQVA-KAVEILH 167
+ L D + LV+++ G L +L + P R + +A +V LH
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 168 SEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVT 227
+HRDIK N+L+D N + RL DFG L+ D +S+ GT P Y++
Sbjct: 196 -----YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSVAVGT-----PDYIS 244
Query: 228 PDNLST----------KTDVFSFGILLLEII 248
P+ L + D +S G+ + E++
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 20/158 (12%)
Query: 55 NGFSEQKLLGKGSHGSVYKAVLRG--RQVAVKKPSKNQEI---SQEVDNEIEILSKIHSP 109
+ + + L+G+GS+G VY A + + VA+KK ++ E + + EI IL+++ S
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
++ L D ++ + + LY VL + L + + L IL++
Sbjct: 88 YIIRL-------HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 170 M--------PPIIHRDIKSANVLIDRNFNARLGDFGLA 199
+ IIHRD+K AN L++++ + ++ DFGLA
Sbjct: 141 LLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 63 LGKGSHGSVYK--AVLRGRQVAVKKPSKNQEISQEVD--NEIEILSKIHSPRLVNLLGFS 118
LG+G++ +VYK + L VA+K+ E E+ +L + +V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+ K LV E++ + L L +N Q+ + + H + ++HRD+
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ--KVLHRDL 126
Query: 179 KSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAG------TIGYLDP-CYVTPDNL 231
K N+LI+ +L DFGLA R +S P T+ Y P + +
Sbjct: 127 KPQNLLINERGELKLADFGLA--------RAKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 232 STKTDVFSFGILLLEIISCR 251
ST+ D++ G + E+ + R
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAV--LRGRQVAVKKPSKNQEIS---QEVDNEIEILSKIHS 108
T+ + + +GKG+ V + V G + A K + + + Q+++ E I +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 109 PRLVNLLGFSNDSKDRLLVVEFMSNGTLYD--VLHSNNRPLNWGRRIRLALQVAKAVEIL 166
+V L ++ LV + ++ G L++ V + I+ L+ +L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEA-----VL 117
Query: 167 HSEMPPIIHRDIKSANVLID---RNFNARLGDFGLALRCGVDN---FRFRSTPPAGTIGY 220
H ++HRD+K N+L+ + +L DFGLA+ D F F AGT GY
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGF-----AGTPGY 172
Query: 221 LDPCYVTPDNLSTKTDVFSFGILLLEIISCRKAIDIGFSP 260
L P + + D+++ G++L ++ +G+ P
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILL-------VGYPP 205
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 40 IKIQHFDYSDLEAATNG-FSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDN 98
+++Q D+ L+ G FSE ++ G VY + + +K+ E+S
Sbjct: 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR----GEVSC-FRE 110
Query: 99 EIEILSKIHSPRLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRI---- 153
E ++L R + L F+ ++ L LV+E+ G L +L +G RI
Sbjct: 111 ERDVLVN-GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLS------KFGERIPAEM 163
Query: 154 -RLAL-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRS 211
R L ++ A++ +H +HRDIK N+L+DR + RL DFG L+ D RS
Sbjct: 164 ARFYLAEIVMAIDSVHRL--GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG-TVRS 220
Query: 212 TPPAGTIGYLDP 223
GT YL P
Sbjct: 221 LVAVGTPDYLSP 232
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDNEI-EILSKI---- 106
T F E + +G G GSV+K V R G A+K+ K S + N + E+ +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 107 HSPRLVNLLGFSNDSKDRLLVV-EFMSNGTLYDVLHSNNRPLNWGRRIRLA---LQVAKA 162
HS + ++ D D +L+ E+ + G+L D + N R +++ + L LQV +
Sbjct: 70 HSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRN 188
+ +HS ++H DIK +N+ I R
Sbjct: 128 LRYIHS--MSLVHMDIKPSNIFISRT 151
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDNEI-EILSKI---- 106
T F E + +G G GSV+K V R G A+K+ K S + N + E+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 107 HSPRLVNLLGFSNDSKDRLLVV-EFMSNGTLYDVLHSNNRPLNWGRRIRLA---LQVAKA 162
HS + ++ D D +L+ E+ + G+L D + N R +++ + L LQV +
Sbjct: 68 HSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRN 188
+ +HS ++H DIK +N+ I R
Sbjct: 126 LRYIHS--MSLVHMDIKPSNIFISRT 149
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDNEI-EILSKI---- 106
T F E + +G G GSV+K V R G A+K+ K S + N + E+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 107 HSPRLVNLLGFSNDSKDRLLVV-EFMSNGTLYDVLHSNNRPLNWGRRIRLA---LQVAKA 162
HS + ++ D D +L+ E+ + G+L D + N R +++ + L LQV +
Sbjct: 68 HSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRN 188
+ +HS ++H DIK +N+ I R
Sbjct: 126 LRYIHS--MSLVHMDIKPSNIFISRT 149
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLG- 116
+G G++GSV A+ + G +VA+KK P +++ ++ E+ +L + ++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 117 FSNDSK-----DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
F+ S D LV+ FM D+ + + L Q+ K ++ +HS
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQT----DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS--A 163
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
++HRD+K N+ ++ + ++ DFGLA + + T P + ++
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWM------ 217
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ +
Sbjct: 218 --HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+G+G+ G V+KA R G++VA+KK ++ + EI+IL + +VNL+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 118 S-------NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
N K + +V L +L + R+ + + +H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 143
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLA 199
I+HRD+K+ANVLI R+ +L DFGLA
Sbjct: 144 -KILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+G+G+ G V+KA R G++VA+KK ++ + EI+IL + +VNL+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 118 S-------NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
N K + +V L +L + R+ + + +H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 144
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLA 199
I+HRD+K+ANVLI R+ +L DFGLA
Sbjct: 145 -KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+G+G+ G V+KA R G++VA+KK ++ + EI+IL + +VNL+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 118 S-------NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
N K + +V L +L + R+ + + +H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 144
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLA 199
I+HRD+K+ANVLI R+ +L DFGLA
Sbjct: 145 -KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 54 TNGFSEQKLLGKGSHGSVYKAVLR--GRQVAVKKPSKNQEISQEVDNEI-EILSKI---- 106
T F E + +G G GSV+K V R G A+K+ K S + N + E+ +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 107 HSPRLVNLLGFSNDSKDRLLVV-EFMSNGTLYDVLHSNNRPLNWGRRIRLA---LQVAKA 162
HS + ++ D D +L+ E+ + G+L D + N R +++ + L LQV +
Sbjct: 66 HSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 163 VEILHSEMPPIIHRDIKSANVLIDRN 188
+ +HS ++H DIK +N+ I R
Sbjct: 124 LRYIHS--MSLVHMDIKPSNIFISRT 147
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLGF 117
+G+G+ G V+KA R G++VA+KK ++ + EI+IL + +VNL+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 118 S-------NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
N K + +V L +L + R+ + + +H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 144
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLA 199
I+HRD+K+ANVLI R+ +L DFGLA
Sbjct: 145 -KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 73 KAVLRGRQVAVKKPSKNQEIS-----QEVDNEIEILSKIHSPRLVNLLGFSNDSKDRLLV 127
K++L ++ K S N +IS + NE++I++ I + + G + + ++
Sbjct: 64 KSLLEKKRDFTK--SNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYII 121
Query: 128 VEFMSNGTL------YDVLHSNNRPLNWGRRIRLALQ-VAKAVEILHSEMPPIIHRDIKS 180
E+M N ++ + VL N + I+ ++ V + +H+E I HRD+K
Sbjct: 122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-KNICHRDVKP 180
Query: 181 ANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST--KTDVF 238
+N+L+D+N +L DFG + VD + GT ++ P + + ++ K D++
Sbjct: 181 SNILMDKNGRVKLSDFGES-EYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIW 236
Query: 239 SFGILL 244
S GI L
Sbjct: 237 SLGICL 242
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 63 LGKGSHGSVYKAVLR--GRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLLG- 116
+G G++GSV A+ + G +VA+KK P +++ ++ E+ +L + ++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 117 FSNDSK-----DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
F+ S D LV+ FM D+ + + L Q+ K ++ +HS
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQT----DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS--A 145
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
++HRD+K N+ ++ + ++ DFGLA + + T P + ++
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWM------ 199
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ +
Sbjct: 200 --HYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQV-AVKKPSKNQEISQEVD---NEIEILSKI--HSPR 110
+S K +G G V++ + +Q+ A+K + + +Q +D NEI L+K+ HS +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L + + +V+E N L L W R+ + +AV +H
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQH- 174
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+H D+K AN LI +L DFG+A + D GT+ Y+ P
Sbjct: 175 -GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQV-AVKKPSKNQEISQEVD---NEIEILSKI--HSPR 110
+S K +G G V++ + +Q+ A+K + + +Q +D NEI L+K+ HS +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L + + +V+E N L L W R+ + +AV +H
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQH- 146
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+H D+K AN LI +L DFG+A + D GT+ Y+ P
Sbjct: 147 -GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQV-AVKKPSKNQEISQEVD---NEIEILSKI--HSPR 110
+S K +G G V++ + +Q+ A+K + + +Q +D NEI L+K+ HS +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L + + +V+E N L L W R+ + +AV +H
Sbjct: 74 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQH- 130
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+H D+K AN LI +L DFG+A + D GT+ Y+ P
Sbjct: 131 -GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 181
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQV-AVKKPSKNQEISQEVD---NEIEILSKI--HSPR 110
+S K +G G V++ + +Q+ A+K + + +Q +D NEI L+K+ HS +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L + + +V+E N L L W R+ + +AV +H
Sbjct: 70 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQH- 126
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+H D+K AN LI +L DFG+A + D GT+ Y+ P
Sbjct: 127 -GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 177
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQV-AVKKPSKNQEISQEVD---NEIEILSKI--HSPR 110
+S K +G G V++ + +Q+ A+K + + +Q +D NEI L+K+ HS +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L + + +V+E N L L W R+ + +AV +H
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQH- 146
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+H D+K AN LI +L DFG+A + D GT+ Y+ P
Sbjct: 147 -GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPP 197
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 60 QKLLGKGSHGSVYKAVLRG--RQVAVKKPSKNQEI---SQEVDNEIEILSKIHSPRLVNL 114
+ L+G+GS+G VY A + + VA+KK ++ E + + EI IL+++ S ++ L
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 115 LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM---- 170
D ++ + + LY VL + L + + L IL++ +
Sbjct: 91 Y-------DLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 171 ----PPIIHRDIKSANVLIDRNFNARLGDFGLA 199
IIHRD+K AN L++++ + ++ DFGLA
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQV-AVKKPSKNQEISQEVD---NEIEILSKI--HSPR 110
+S K +G G V++ + +Q+ A+K + + +Q +D NEI L+K+ HS +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L + + +V+E N L L W R+ + +AV +H
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQH- 174
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+H D+K AN LI +L DFG+A + D GT+ Y+ P
Sbjct: 175 -GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 225
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 63 LGKGSHGSVYKAV--LRGRQVAVK--KPSKNQEISQEVDNEIEILSKIHS-PRLVNLLGF 117
LG+G + V++A+ +V VK KP K +I +E I+IL + P ++ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKRE----IKILENLRGGPNIITLADI 100
Query: 118 SND--SKDRLLVVEFMSNG---TLYDVLHSNNRPLNWGRRIRLAL-QVAKAVEILHSEMP 171
D S+ LV E ++N LY L + IR + ++ KA++ HS
Sbjct: 101 VKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKALDYCHSM-- 150
Query: 172 PIIHRDIKSANVLIDRNFNA-RLGDFGLA 199
I+HRD+K NV+ID RL D+GLA
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQV-AVKKPSKNQEISQEVD---NEIEILSKI--HSPR 110
+S K +G G V++ + +Q+ A+K + + +Q +D NEI L+K+ HS +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L + + +V+E N L L W R+ + +AV +H
Sbjct: 71 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQH- 127
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+H D+K AN LI +L DFG+A + D GT+ Y+ P
Sbjct: 128 -GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 44/226 (19%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI-SQEVDNEIEILSKIH 107
+++ F K++G+G+ G +VAV K + I + ++ N+ E+L +
Sbjct: 68 EMQLHREDFEIIKVIGRGAFG----------EVAVVKMKNTERIYAMKILNKWEMLKRAE 117
Query: 108 SP--------------RLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRR 152
+ + + L ++ ++ L LV+++ G L +L L
Sbjct: 118 TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 177
Query: 153 IRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST 212
++ A++ +H +HRDIK NVL+D N + RL DFG L+ D+ +S+
Sbjct: 178 RFYIGEMVLAIDSIHQ--LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMN-DDGTVQSS 234
Query: 213 PPAGTIGYLDPCYVTPDNLST----------KTDVFSFGILLLEII 248
GT P Y++P+ L + D +S G+ + E++
Sbjct: 235 VAVGT-----PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 42/225 (18%)
Query: 49 DLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHS 108
+++ F K++G+G+ G V VK + + + ++ N+ E+L + +
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEV---------AVVKMKNTERIYAMKILNKWEMLKRAET 134
Query: 109 P--------------RLVNLLGFSNDSKDRL-LVVEFMSNGTLYDVLHSNNRPLNWGRRI 153
+ + L ++ ++ L LV+++ G L +L L
Sbjct: 135 ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR 194
Query: 154 RLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTP 213
++ A++ +H +HRDIK NVL+D N + RL DFG L+ D+ +S+
Sbjct: 195 FYIGEMVLAIDSIHQ--LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMN-DDGTVQSSV 251
Query: 214 PAGTIGYLDPCYVTPDNLST----------KTDVFSFGILLLEII 248
GT P Y++P+ L + D +S G+ + E++
Sbjct: 252 AVGT-----PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 63 LGKGSHGSVYKAV--LRGRQVAVKKPSKNQE---ISQEVDNEIEILSKIHSPRLVNLLGF 117
LG+G++G VYKA+ + VA+K+ E + E+ +L ++ ++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRI--RLALQVAKAVEILHSEMPPIIH 175
+ + L+ E+ N D+ ++ + R+ Q+ V HS +H
Sbjct: 102 IHHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR--CLH 155
Query: 176 RDIKSANVLIDRNFNA-----RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD 229
RD+K N+L+ + + ++GDFGLA G+ +F T T+ Y P +
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIITLWYRPPEILLGSR 213
Query: 230 NLSTKTDVFSFGILLLEII 248
+ ST D++S + E++
Sbjct: 214 HYSTSVDIWSIACIWAEML 232
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 48 SDLEAATNGFSEQKLLGKGSHGSVYKAV-LRGRQVAVKKPSK------------NQEISQ 94
++L A + ++ Q+ + GS+G+V V G VA+K+ + + +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 95 EVDNEIEILSKIHSPRLVNL----LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWG 150
V EI +L+ H P ++ L + F + +L +V + L V+H ++
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA 199
+ + +LH ++HRD+ N+L+ N + + DF LA
Sbjct: 135 HIQYFMYHILLGLHVLHE--AGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 48 SDLEAATNGFSEQKLLGKGSHGSVYKAV-LRGRQVAVKKPSK------------NQEISQ 94
++L A + ++ Q+ + GS+G+V V G VA+K+ + + +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 95 EVDNEIEILSKIHSPRLVNL----LGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWG 150
V EI +L+ H P ++ L + F + +L +V + L V+H ++
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 151 RRIRLALQVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA 199
+ + +LH ++HRD+ N+L+ N + + DF LA
Sbjct: 135 HIQYFMYHILLGLHVLHE--AGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 98/204 (48%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLL- 115
+G G++GSV Y A LR ++VAVKK P ++ ++ E+ +L + ++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 116 ----GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
S + + +V + L +++ S + L+ L Q+ + ++ +HS
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKS--QALSDEHVQFLVYQLLRGLKYIHS--A 150
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
IIHRD+K +NV ++ + R+ DFGLA + + + +T P + ++
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWM------ 204
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E++ +
Sbjct: 205 --HYNQTVDIWSVGCIMAELLQGK 226
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRGRQV-AVKKPSKNQEISQEVD---NEIEILSKI--HSPR 110
+S K +G G V++ + +Q+ A+K + + +Q +D NEI L+K+ HS +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
++ L + + +V+E N L L W R+ + +AV +H
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQH- 174
Query: 171 PPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+H D+K AN LI +L DFG+A + D G + Y+ P
Sbjct: 175 -GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 33/216 (15%)
Query: 51 EAATNGFSEQKLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILS---- 104
E + + L+GKGS G V KA R Q VA+K + + E+ +L
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK 109
Query: 105 -----KIHSPRLVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNN-RPLNWGRRIRLALQ 158
K + L F N L +V M + LYD+L + N R ++ + A Q
Sbjct: 110 HDTEMKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLI--DRNFNARLGDFGLALRCGVDNF-----RFRS 211
+ A+ L + IIH D+K N+L+ + ++ DFG + + G + RF
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYR 225
Query: 212 TPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEI 247
+P +G P +L+ D++S G +L+E+
Sbjct: 226 SPEV-LLG-------MPYDLA--IDMWSLGCILVEM 251
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 28/202 (13%)
Query: 63 LGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLL- 115
+G G++GSV Y A LR ++VAVKK P ++ ++ E+ +L + ++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 116 ----GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
S + + +V + L +++ + L+ L Q+ + ++ +HS
Sbjct: 87 VFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVYQLLRGLKYIHS--A 142
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
IIHRD+K +NV ++ + R+ DFGLA + + + +T P + ++
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWM------ 196
Query: 228 PDNLSTKTDVFSFGILLLEIIS 249
+ + D++S G ++ E++
Sbjct: 197 --HYNQTVDIWSVGCIMAELLQ 216
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL-GF 117
++LG G +G V + + Q A+K + +EV+ H R+V++
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 97
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHS-NNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K L+V+E + G L+ + ++ + + +A++ LHS I HR
Sbjct: 98 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 155
Query: 177 DIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
D+K N+L N +L DFG A N T P T Y+ P + P+
Sbjct: 156 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDK 212
Query: 234 KTDVFSFGILLLEIISC 250
D++S G+++ I+ C
Sbjct: 213 SCDMWSLGVIMY-ILLC 228
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 28/202 (13%)
Query: 63 LGKGSHGSV---YKAVLRGRQVAVKK---PSKNQEISQEVDNEIEILSKIHSPRLVNLL- 115
+G G++GSV Y A LR ++VAVKK P ++ ++ E+ +L + ++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 116 ----GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
S + + +V + L +++ + L+ L Q+ + ++ +HS
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVYQLLRGLKYIHS--A 150
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
IIHRD+K +NV ++ + R+ DFGLA + + + +T P + ++
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWM------ 204
Query: 228 PDNLSTKTDVFSFGILLLEIIS 249
+ + D++S G ++ E++
Sbjct: 205 --HYNQTVDIWSVGCIMAELLQ 224
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 43/240 (17%)
Query: 47 YSDLEAATNGFSEQKLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKI 106
Y + +N F + +G+G+ SVY A + + +K + I + I I +++
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIP--TSHPIRIAAEL 70
Query: 107 HSPRLV----NLLG--FSNDSKDRLLV-VEFMSNGTLYDVLHSNNRPLNWGRRIRLALQV 159
+ N++G + D +++ + ++ + + D+L+S L++ L +
Sbjct: 71 QCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS----LSFQEVREYMLNL 126
Query: 160 AKAVEILHSEMPPIIHRDIKSANVLIDRNFNAR-LGDFGLAL------------------ 200
KA++ +H I+HRD+K +N L +R L DFGLA
Sbjct: 127 FKALKRIHQF--GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQ 184
Query: 201 --RCGVDNF------RFRSTPPAGTIGYLDPCYVTP-DNLSTKTDVFSFGILLLEIISCR 251
RC + R + P AGT G+ P +T N +T D++S G++ L ++S R
Sbjct: 185 QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL-GF 117
++LG G +G V + + Q A+K + +EV+ H R+V++
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 82
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K L+V+E + G L+ + ++ + + +A++ LHS I HR
Sbjct: 83 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 140
Query: 177 DIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
D+K N+L N +L DFG A N T P T Y+ P + P+
Sbjct: 141 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDK 197
Query: 234 KTDVFSFGILLLEIISC 250
D++S G+++ I+ C
Sbjct: 198 SCDMWSLGVIMY-ILLC 213
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 62 LLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILS---------KIHSPR 110
L+GKGS G V KA R Q VA+K + + E+ +L K +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNN-RPLNWGRRIRLALQVAKAVEILHSE 169
L F N L +V M + LYD+L + N R ++ + A Q+ A+ L +
Sbjct: 121 LKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176
Query: 170 MPPIIHRDIKSANVLI--DRNFNARLGDFGLALRCGVDNF-----RFRSTPPAGTIGYLD 222
IIH D+K N+L+ + ++ DFG + + G + RF +P +G
Sbjct: 177 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEV-LLG--- 232
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEI 247
P +L+ D++S G +L+E+
Sbjct: 233 ----MPYDLA--IDMWSLGCILVEM 251
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL-GF 117
++LG G +G V + + Q A+K + +EV+ H R+V++
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 81
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K L+V+E + G L+ + ++ + + +A++ LHS I HR
Sbjct: 82 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 139
Query: 177 DIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
D+K N+L N +L DFG A N T P T Y+ P + P+
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTEPCYTPYYVAPEVLGPEKYDK 196
Query: 234 KTDVFSFGILLLEIISC 250
D++S G+++ I+ C
Sbjct: 197 SCDMWSLGVIMY-ILLC 212
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 62 LLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILS---------KIHSPR 110
L+GKGS G V KA R Q VA+K + + E+ +L K +
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 101
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNN-RPLNWGRRIRLALQVAKAVEILHSE 169
L F N L +V M + LYD+L + N R ++ + A Q+ A+ L +
Sbjct: 102 LKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 157
Query: 170 MPPIIHRDIKSANVLI--DRNFNARLGDFGLALRCGVDNF-----RFRSTPPAGTIGYLD 222
IIH D+K N+L+ + ++ DFG + + G + RF +P +G
Sbjct: 158 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEV-LLG--- 213
Query: 223 PCYVTPDNLSTKTDVFSFGILLLEI 247
P +L+ D++S G +L+E+
Sbjct: 214 ----MPYDLA--IDMWSLGCILVEM 232
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 144
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
IIHRD+K +N+ ++ + ++ DFGLA + F +T P + ++
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWM------ 198
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 199 --HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL-GF 117
++LG G +G V + + Q A+K + +EV+ H R+V++
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 81
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K L+V+E + G L+ + ++ + + +A++ LHS I HR
Sbjct: 82 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 139
Query: 177 DIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
D+K N+L N +L DFG A N T P T Y+ P + P+
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDK 196
Query: 234 KTDVFSFGILLLEIISC 250
D++S G+++ I+ C
Sbjct: 197 SCDMWSLGVIMY-ILLC 212
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 125 LLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANV 183
L+V+E + G L+ + ++ + + +A++ LHS I HRD+K N+
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPENL 198
Query: 184 LIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
L N +L DFG A N T P T Y+ P + P+ D++S
Sbjct: 199 LYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 241 GILLLEIISC 250
G+++ I+ C
Sbjct: 256 GVIMY-ILLC 264
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 144
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
IIHRD+K +N+ ++ + ++ DFGLA + F +T P + ++
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWM------ 198
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 199 --HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL-GF 117
++LG G +G V + + Q A+K + +EV+ H R+V++
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K L+V+E + G L+ + ++ + + +A++ LHS I HR
Sbjct: 90 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 147
Query: 177 DIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
D+K N+L N +L DFG A N T P T Y+ P + P+
Sbjct: 148 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDK 204
Query: 234 KTDVFSFGILLLEIISC 250
D++S G+++ I+ C
Sbjct: 205 SCDMWSLGVIMY-ILLC 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL-GF 117
++LG G +G V + + Q A+K + +EV+ H R+V++
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 87
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K L+V+E + G L+ + ++ + + +A++ LHS I HR
Sbjct: 88 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 145
Query: 177 DIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
D+K N+L N +L DFG A N T P T Y+ P + P+
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDK 202
Query: 234 KTDVFSFGILLLEIISC 250
D++S G+++ I+ C
Sbjct: 203 SCDMWSLGVIMY-ILLC 218
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL-GF 117
++LG G +G V + + Q A+K + +EV+ H R+V++
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 88
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K L+V+E + G L+ + ++ + + +A++ LHS I HR
Sbjct: 89 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 146
Query: 177 DIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
D+K N+L N +L DFG A N T P T Y+ P + P+
Sbjct: 147 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDK 203
Query: 234 KTDVFSFGILLLEIISC 250
D++S G+++ I+ C
Sbjct: 204 SCDMWSLGVIMY-ILLC 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 125 LLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANV 183
L+V+E + G L+ + ++ + + +A++ LHS I HRD+K N+
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPENL 192
Query: 184 LIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
L N +L DFG A N T P T Y+ P + P+ D++S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 241 GILLLEIISC 250
G+++ I+ C
Sbjct: 250 GVIMY-ILLC 258
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL-GF 117
++LG G +G V + + Q A+K + +EV+ H R+V++
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 83
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K L+V+E + G L+ + ++ + + +A++ LHS I HR
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 141
Query: 177 DIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
D+K N+L N +L DFG A N T P T Y+ P + P+
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 234 KTDVFSFGILLLEIISC 250
D++S G+++ I+ C
Sbjct: 199 SCDMWSLGVIMY-ILLC 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ--VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLL-GF 117
++LG G +G V + + Q A+K + +EV+ H R+V++
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 83
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
K L+V+E + G L+ + ++ + + +A++ LHS I HR
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 141
Query: 177 DIKSANVLIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLST 233
D+K N+L N +L DFG A N T P T Y+ P + P+
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 234 KTDVFSFGILLLEIISC 250
D++S G+++ I+ C
Sbjct: 199 SCDMWSLGVIMY-ILLC 214
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 86 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 140
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
IIHRD+K +N+ ++ + ++ DFGLA + F +T P + ++
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWM------ 194
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 195 --HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 25/196 (12%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ----VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
K +G G+ G ++R +Q VAVK + ++I + V EI + P +V
Sbjct: 24 KDIGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKE 81
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+V+E+ S G L++ + + R R Q+ V H+ + HR
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCHAMQ--VCHR 138
Query: 177 DIKSANVLIDRNFNARLG--DFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK 234
D+K N L+D + RL DFG + + + P T+G P Y+ P+ L K
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYSKSSVL------HSQPKSTVG--TPAYIAPEVLLKK 190
Query: 235 ------TDVFSFGILL 244
DV+S G+ L
Sbjct: 191 EYDGKVADVWSCGVTL 206
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 57 FSEQKLLGKGSHGSVYKAVLRG--RQVAVKKP--SKNQEISQEVDNEIEILSKIHSPRLV 112
+ + K LG G +G V+ AV ++VA+KK + Q + + EI+I+ ++ +V
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHAL-REIKIIRRLDHDNIV 71
Query: 113 NLLGFSNDSKDRL--------------LVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQ 158
+ S +L +V E+M L +VL PL Q
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD-LANVLEQG--PLLEEHARLFMYQ 128
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLID-RNFNARLGDFGLALRCGVDNFRFRSTPPAGT 217
+ + ++ +HS ++HRD+K AN+ I+ + ++GDFGLA R ++ + G
Sbjct: 129 LLRGLKYIHS--ANVLHRDLKPANLFINTEDLVLKIGDFGLA-RIMDPHYSHKGHLSEGL 185
Query: 218 IG--YLDP-CYVTPDNLSTKTDVFSFGILLLEIISCR 251
+ Y P ++P+N + D+++ G + E+++ +
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK SK Q I ++ E+ +L + ++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 102 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 202
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 61 KLLGKGSHG--SVYKAVLRGRQVAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLGFS 118
K +G G+ G + + L VAVK + I + V EI + P +V
Sbjct: 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 119 NDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDI 178
+++E+ S G LY+ + + R R Q+ V HS I HRD+
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ-QLLSGVSYCHSMQ--ICHRDL 142
Query: 179 KSANVLIDRNFNARLG--DFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK-- 234
K N L+D + RL DFG + + + P T+G P Y+ P+ L +
Sbjct: 143 KLENTLLDGSPAPRLKICDFGYSKSSVL------HSQPKSTVG--TPAYIAPEVLLRQEY 194
Query: 235 ----TDVFSFGILL 244
DV+S G+ L
Sbjct: 195 DGKIADVWSCGVTL 208
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 25/196 (12%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ----VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
K +G G+ G ++R +Q VAVK + ++I+ V EI + P +V
Sbjct: 25 KDIGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+V+E+ S G L++ + + R R Q+ V H+ + HR
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCHAMQ--VCHR 139
Query: 177 DIKSANVLIDRNFNARLG--DFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK 234
D+K N L+D + RL DFG + + + P T+G P Y+ P+ L K
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYSKSSVL------HSQPKSTVG--TPAYIAPEVLLKK 191
Query: 235 ------TDVFSFGILL 244
DV+S G+ L
Sbjct: 192 EYDGKVADVWSCGVTL 207
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDN 98
+Y D EA T + EQ + +G+G + V++ + + + + K K + +
Sbjct: 16 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 75
Query: 99 EIEILSKIHSPRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
+ + + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 76 IKILQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 130
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 131 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 49/234 (20%)
Query: 63 LGKGSHGSVYKAVLRGRQVAVKKPSKNQE---ISQEVDNEIEILSKIHSPRLVNLLGFSN 119
+G+G++G VYKA + + K E IS EI +L ++ P +++L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 120 DSKDRLLVVEFMSNGTLYDVLH---------SNNRPLNWGRRI--RLALQVAKAVEILHS 168
DR + + F + +D+ H +N +P+ R + L Q+ + LH+
Sbjct: 89 SHADRKVWLLF--DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 169 EMPPIIHRDIKSANVLI----DRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPC 224
++HRD+K AN+L+ ++ D G A R ++ P + LDP
Sbjct: 147 NW--VLHRDLKPANILVMGEGPERGRVKIADMGFA--------RLFNS-PLKPLADLDPV 195
Query: 225 YVT-----PD------NLSTKTDVFSFGILLLEIIS------CRKAIDIGFSPP 261
VT P+ + + D+++ G + E+++ CR+ DI S P
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE-DIKTSNP 248
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 97 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R D T T Y P +
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLA-RHTADEM----TGYVATRWYRAPEIMLN 203
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 110 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 164
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y P+
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRAPEI 213
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 109 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 163
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y P+
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRAPEI 212
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 97 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R D T T Y P +
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLA-RHTADEM----TGYVATRWYRAPEIMLN 203
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 97 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R D T T Y P +
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLA-RHTADEM----TGYVATRWYRAPEIMLN 203
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 96 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 150
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y P+
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRAPEI 199
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 100 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 154
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y P+
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRAPEI 203
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 86 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSA-- 140
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y P+
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRAPEI 189
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 16/154 (10%)
Query: 57 FSEQKLLGKGSHGSVYKAV--LRGRQVAVKKPSKNQEI---SQEVDNEIEILSKIHSPRL 111
+ + L+G GS+G V +A L R VA+KK + E + + EI IL++++ +
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 112 VNLLGF----SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGR-RIR-LALQVAKAVEI 165
V +L + D L VV +++ + + P+ I+ L + V+
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT---PVYLTELHIKTLLYNLLVGVKY 171
Query: 166 LHSEMPPIIHRDIKSANVLIDRNFNARLGDFGLA 199
+HS I+HRD+K AN L++++ + ++ DFGLA
Sbjct: 172 VHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDN 98
+Y D EA T + EQ + +G+G + V++ + + + + K K + +
Sbjct: 18 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 77
Query: 99 EIEILSKIHSPRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
+ + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 78 IKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 132
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 133 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 175
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNE 99
+Y D EA T + EQ + +G+G + V++ + +++ E
Sbjct: 37 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 96
Query: 100 IEILSKIHS-PRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
I+IL + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 97 IKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 151
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 152 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 194
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDN 98
+Y D EA T + EQ + +G+G + V++ + + + + K K + +
Sbjct: 16 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 75
Query: 99 EIEILSKIHSPRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
+ + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 76 IKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 130
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 131 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDN 98
+Y D EA T + EQ + +G+G + V++ + + + + K K + +
Sbjct: 17 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 76
Query: 99 EIEILSKIHSPRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
+ + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 77 IKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 131
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 132 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 174
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNE 99
+Y D EA T + EQ + +G+G + V++ + +++ E
Sbjct: 16 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 75
Query: 100 IEILSKIHS-PRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
I+IL + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 76 IKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 130
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 131 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNE 99
+Y D EA T + EQ + +G+G + V++ + +++ E
Sbjct: 17 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 76
Query: 100 IEILSKIHS-PRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
I+IL + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 77 IKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 131
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 132 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 174
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAV-LRGRQVAVKKPSKNQEISQEVDN 98
+Y D EA T + EQ + +G+G + V++ + + + + K K + +
Sbjct: 16 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 75
Query: 99 EIEILSKIHSPRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
+ + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 76 IKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 130
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 131 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 144
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPDN 230
IIHRD+K +N+ ++ + ++ DFGLA R D T T Y P + +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLA-RHTDDEM----TGYVATRWYRAPEIMLNAMH 199
Query: 231 LSTKTDVFSFGILLLEIISCR 251
+ D++S G ++ E+++ R
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 95 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLA----------RHTDDEMT-GYVATRWYRA 195
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ----VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
K +G G+ G ++R +Q VAVK + ++I + V EI + P +V
Sbjct: 25 KDIGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+V+E+ S G L++ + + R R Q+ V H+ + HR
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCHAMQ--VCHR 139
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK-- 234
D+K N L+D + RL G + P T+G P Y+ P+ L K
Sbjct: 140 DLKLENTLLDGSPAPRLKICAF----GYSKSSVLHSQPKSTVG--TPAYIAPEVLLKKEY 193
Query: 235 ----TDVFSFGILL 244
DV+S G+ L
Sbjct: 194 DGKVADVWSCGVTL 207
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 101 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 155 --ADIIHRDLKPSNLAVNEDXELKILDFGLA----------RHTDDEMT-GYVATRWYRA 201
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 102 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 202
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 102 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 202
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNE 99
+Y D EA T + EQ + +G+G + V++ + +++ E
Sbjct: 16 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 75
Query: 100 IEILSKIHS-PRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
I+IL + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 76 IKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 130
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 131 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ + L L Q+ + ++ +HS
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG-ADLNNIV--KXQKLTDDHVQFLIYQILRGLKYIHS--A 144
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y P+
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLA----------RHTDDEMT-GYVATRWYRAPEI 193
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNE 99
+Y D EA T + EQ + +G+G + V++ + +++ E
Sbjct: 16 EYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKRE 75
Query: 100 IEILSKIHS-PRLVNLLGFSND--SKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLA 156
I+IL + P +V LL D SK L+ E+++N T + VL+ P IR
Sbjct: 76 IKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLY----PTLTDYDIRYY 130
Query: 157 L-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNF-NARLGDFGLA 199
+ ++ KA++ HS+ I+HRD+K NV+ID RL D+GLA
Sbjct: 131 IYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 86 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCAK--LTDDHVQFLIYQILRGLKYIHS--A 140
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y P+
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRAPEI 189
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 101 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 155 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 201
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 113 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 213
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 95 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLA----------RHTDDEMT-GYVATRWYRA 195
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ + L L Q+ + ++ +HS
Sbjct: 113 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS--A 167
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
IIHRD+K +N+ ++ + ++ DFGLA + + +T P + ++
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWM------ 221
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 222 --HYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 110 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 210
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 92 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 192
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 92 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 192
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 97 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 197
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 109 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 209
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ + L L Q+ + ++ +HS
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG-ADLNNIV--KXQKLTDDHVQFLIYQILRGLKYIHS--A 144
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y P+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRAPEI 193
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 96 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 196
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 92 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPC 224
IIHRD+K +N+ ++ + ++ DFGLA + + +T P + ++
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM--- 200
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 201 -----HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ----VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
K +G G+ G ++R +Q VAVK + ++I + V EI + P +V
Sbjct: 25 KDIGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+V+E+ S G L++ + + R R Q+ V H+ + HR
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCHAMQ--VCHR 139
Query: 177 DIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK-- 234
D+K N L+D + RL G + P T+G P Y+ P+ L K
Sbjct: 140 DLKLENTLLDGSPAPRLKICAF----GYSKSSVLHSQPKDTVG--TPAYIAPEVLLKKEY 193
Query: 235 ----TDVFSFGILL 244
DV+S G+ L
Sbjct: 194 DGKVADVWSCGVTL 207
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 25/196 (12%)
Query: 61 KLLGKGSHGSVYKAVLRGRQ----VAVKKPSKNQEISQEVDNEIEILSKIHSPRLVNLLG 116
K +G G+ G ++R +Q VAVK + ++I + V EI + P +V
Sbjct: 25 KDIGAGNFGVA--RLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 117 FSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHR 176
+V+E+ S G L++ + + R R Q+ V H+ + HR
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYAHAMQ--VAHR 139
Query: 177 DIKSANVLIDRNFNARL--GDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTK 234
D+K N L+D + RL DFG + + + P +G P Y+ P+ L K
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSKASVL------HSQPKSAVG--TPAYIAPEVLLKK 191
Query: 235 ------TDVFSFGILL 244
DV+S G+ L
Sbjct: 192 EYDGKVADVWSCGVTL 207
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 88 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 141
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 142 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 188
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 62 LLGKGSHGSVYKAVLRGRQ-----VAVKKPSKNQEISQEVD---NEIEILSKIHSPRLVN 113
+LG+G+ +V+ RGR + K N + VD E E+L K++ +V
Sbjct: 16 ILGQGATANVF----RGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 114 LLGFSNDSKDR--LLVVEFMSNGTLYDVLH--SNNRPLNWGRRIRLALQVAKAVEILHSE 169
L ++ R +L++EF G+LY VL SN L + + V + H
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN--HLR 129
Query: 170 MPPIIHRDIKSANVL----IDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+HR+IK N++ D +L DFG A R D+ +F S GT YL P
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG-AARELEDDEQFVSL--YGTEEYLHP 184
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 95 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 195
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLL-- 115
+G G++GSV + V G ++AVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 116 ---GFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPP 172
S + + + +V + L +++ L L Q+ + ++ +HS
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--AD 174
Query: 173 IIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVTP 228
IIHRD+K +N+ ++ + ++ DFGLA + + +T P + ++
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM------- 227
Query: 229 DNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 228 -HYNMTVDIWSVGCIMAELLTGR 249
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 89 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 142
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 143 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 189
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 95 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 195
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 32/206 (15%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 110 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 164
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPD-- 229
IIHRD+K +N+ ++ + ++ DFGLA R G + Y P+
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLA--------RHTDDEMXGXVA--TRWYRAPEIM 214
Query: 230 ----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R D T T Y P +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA-RHTDDEM----TGXVATRWYRAPEIMLN 196
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 96 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 150
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y P+
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRAPEI 199
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 92 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 146 --ADIIHRDLKPSNLAVNEDSELKILDFGLA----------RHTDDEMT-GYVATRWYRA 192
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 86 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 140 A--DIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 186
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 87 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 141
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
IIHRD+K +N+ ++ + ++ DFGLA + + +T P + ++
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM------ 195
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 196 --HYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 96 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 150 --ADIIHRDLKPSNLAVNEDSELKILDFGLA----------RHTDDEMT-GYVATRWYRA 196
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 87 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DFGLA R T T GY+ Y
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----------RHTDDEMT-GYVATRWYRA 187
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ S L L Q+ + ++ +HS
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKSQK--LTDDHVQFLIYQILRGLKYIHS--A 144
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVTPD- 229
IIHRD+K +N+ ++ + ++ DFGL R T T GY+ Y P+
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLC----------RHTDDEMT-GYVATRWYRAPEI 193
Query: 230 -----NLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 125 LLVVEFMSNGTLYDVLHSN-NRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANV 183
L+V E + G L+ + ++ + + +A++ LHS I HRD+K N+
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS--INIAHRDVKPENL 192
Query: 184 LIDR---NFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSF 240
L N +L DFG A N T P T Y+ P + P+ D +S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 241 GIL 243
G++
Sbjct: 250 GVI 252
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 34/207 (16%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPC 224
IIHRD+K +N+ ++ + ++ D+GLA + + +T P + ++
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWM--- 198
Query: 225 YVTPDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 199 -----HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 25/178 (14%)
Query: 62 LLGKGSHGSVYKAVLRGRQ-----VAVKKPSKNQEISQEVD---NEIEILSKIHSPRLVN 113
+LG+G+ +V+ RGR + K N + VD E E+L K++ +V
Sbjct: 16 ILGQGATANVF----RGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 114 LLGFSNDSKDR--LLVVEFMSNGTLYDVLH--SNNRPLNWGRRIRLALQVAKAVEILHSE 169
L ++ R +L++EF G+LY VL SN L + + V + H
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN--HLR 129
Query: 170 MPPIIHRDIKSANVL----IDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP 223
I+HR+IK N++ D +L DFG A R D+ +F GT YL P
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG-AARELEDDEQFVXL--YGTEEYLHP 184
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ DF LA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFYLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ FGLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILGFGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 62 LLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQ--------EVDNEIEILSKIHS--P 109
LLG G GSVY V VA+K K++ IS V E+ +L K+ S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR-ISDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 110 RLVNLLGFSNDSKDRLLVVEFMSN-GTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHS 168
++ LL + +L++E M L+D + + L QV +AV H
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFI-TERGALQEELARSFFWQVLEAVR--HC 130
Query: 169 EMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVT 227
++HRDIK N+LID N +L DFG + T GT Y P ++
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIR 186
Query: 228 PDNLSTKT-DVFSFGILLLEII 248
++ V+S GILL +++
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMV 208
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 28/204 (13%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSK------DRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMP 171
++ D LV M L +++ L L Q+ + ++ +HS
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHS--A 144
Query: 172 PIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRST----PPAGTIGYLDPCYVT 227
IIHRD+K +N+ ++ + ++ D GLA + + +T P + ++
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWM------ 198
Query: 228 PDNLSTKTDVFSFGILLLEIISCR 251
+ + D++S G ++ E+++ R
Sbjct: 199 --HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 50/194 (25%)
Query: 50 LEAATNGFSEQKLLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQEVDNEIEILSKIH 107
LE ++ +S K LG GS G V + + G++ A+KK ++ + +++L ++
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVN 61
Query: 108 SPRLV--------------------NLLGFSND-------------SKDRLL--VVEFMS 132
+LV N LG N+ S+++ L ++E++
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 133 NGTLYDVLHSNNRPLNWGRRIRLAL------QVAKAVEILHSEMPPIIHRDIKSANVLID 186
+ TL+ VL S R GR I + L Q+ +AV +HS I HRDIK N+L++
Sbjct: 122 D-TLHKVLKSFIRS---GRSIPMNLISIYIYQLFRAVGFIHSLG--ICHRDIKPQNLLVN 175
Query: 187 RNFNA-RLGDFGLA 199
N +L DFG A
Sbjct: 176 SKDNTLKLCDFGSA 189
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ D GLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDRGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 10/185 (5%)
Query: 71 VYKA--VLRGRQVAVKKPSKNQE----ISQEVDNEIEILSKIHSPRLVNLLGFSNDSKDR 124
VY+A +R R VA+K S+ E ++ P +V + F + +
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDF-GEIDGQ 108
Query: 125 LLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEMPPIIHRDIKSANVL 184
L V + NG PL R + + Q+ A++ H+ HRD+K N+L
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENIL 166
Query: 185 IDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILL 244
+ + A L DFG+A D + GT+ Y P + + + + D+++ +L
Sbjct: 167 VSADDFAYLVDFGIA-SATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVL 225
Query: 245 LEIIS 249
E ++
Sbjct: 226 YECLT 230
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 40/210 (19%)
Query: 63 LGKGSHGSVYKA--VLRGRQVAVKKPSKN-QEI--SQEVDNEIEILSKIHSPRLVNLLGF 117
+G G++GSV A G +VAVKK S+ Q I ++ E+ +L + ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 118 SNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIR---------LALQVAKAVEILHS 168
++ + EF +Y V H LN + + L Q+ + ++ +HS
Sbjct: 90 FTPARS---LEEF---NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 169 EMPPIIHRDIKSANVLIDRNFNARLGDFGLALRCGVDNFRFRSTPPAGTIGYLDP-CYVT 227
IIHRD+K +N+ ++ + ++ D GLA R T T GY+ Y
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDGGLA----------RHTDDEMT-GYVATRWYRA 190
Query: 228 PD------NLSTKTDVFSFGILLLEIISCR 251
P+ + + D++S G ++ E+++ R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 62 LLGKGSHGSVYKAVLRGRQVAVKKPSKNQEI--------SQEVDNEIEILSKIHSPRLVN 113
LLG+GS+G V K VL + + ++ V EI++L ++ ++
Sbjct: 12 LLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 114 LLG-FSNDSKDRL-LVVEFMSNGT--LYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSE 169
L+ N+ K ++ +V+E+ G + D + P+ Q+ +E LHS+
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHG--YFCQLIDGLEYLHSQ 128
Query: 170 MPPIIHRDIKSANVLIDRNFNARLGDFGLA 199
I+H+DIK N+L+ ++ G+A
Sbjct: 129 G--IVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
Query: 121 SKDRLLVVEFMSNG---TLYDVLHSNNRPLNWGRRIRLAL-QVAKAVEILHSEMPPIIHR 176
SK LV E+++N LY +L + IR + ++ KA++ HS+ I+HR
Sbjct: 112 SKTPALVFEYINNTDFKQLYQILTDFD--------IRFYMYELLKALDYCHSK--GIMHR 161
Query: 177 DIKSANVLID-RNFNARLGDFGLA 199
D+K NV+ID + RL D+GLA
Sbjct: 162 DVKPHNVMIDHQQKKLRLIDWGLA 185
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
Query: 121 SKDRLLVVEFMSNG---TLYDVLHSNNRPLNWGRRIRLAL-QVAKAVEILHSEMPPIIHR 176
SK LV E+++N LY +L + IR + ++ KA++ HS+ I+HR
Sbjct: 107 SKTPALVFEYINNTDFKQLYQILTDFD--------IRFYMYELLKALDYCHSK--GIMHR 156
Query: 177 DIKSANVLID-RNFNARLGDFGLA 199
D+K NV+ID + RL D+GLA
Sbjct: 157 DVKPHNVMIDHQQKKLRLIDWGLA 180
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 111 LVNLLGFSNDSKDRLLVVEFMSNGTLYDVLHSNNRPLNWGRRIRLALQVAKAVEILHSEM 170
L + F K +V+E + +L D+ +R + +A+Q+ +E +HS+
Sbjct: 59 LPQVYYFGPXGKYNAMVLELLGP-SLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSK- 116
Query: 171 PPIIHRDIKSANVLIDRNFNAR-----LGDFGLA 199
+I+RD+K N LI R N + + DFGLA
Sbjct: 117 -NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 43/212 (20%)
Query: 62 LLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQ--------EVDNEIEILSKIHS--P 109
LLG G GSVY V VA+K K++ IS V E+ +L K+ S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR-ISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 110 RLVNLLGFSNDSKDRLLVVE----------FMSN-GTLYDVLHSNNRPLNWGRRIRLALQ 158
++ LL + +L++E F++ G L + L R W Q
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARSFFW--------Q 118
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGT 217
V +AV H ++HRDIK N+LID N +L DFG + T GT
Sbjct: 119 VLEAVR--HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGT 172
Query: 218 IGYLDPCYVTPDNLSTKT-DVFSFGILLLEII 248
Y P ++ ++ V+S GILL +++
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 46 DYSDLEAATNGFSEQ------KLLGKGSHGSVYKAVLRGRQVAVKKPSKNQEISQEVDNE 99
+Y D E+ + Q + LG+G + V++A+ V +++ E
Sbjct: 22 EYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKRE 81
Query: 100 IEILSKIHS-PRLVNLLGFSND--SKDRLLVVEFMSNG---TLYDVLHSNNRPLNWGRRI 153
I+IL + P ++ L D S+ LV E ++N LY L + I
Sbjct: 82 IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------I 133
Query: 154 RLAL-QVAKAVEILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLA 199
R + ++ KA++ HS I+HRD+K NVLID RL D+GLA
Sbjct: 134 RFYMYEILKALDYCHS--MGIMHRDVKPHNVLIDHEHRKLRLIDWGLA 179
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 43/212 (20%)
Query: 62 LLGKGSHGSVYKA--VLRGRQVAVKKPSKNQEISQ--------EVDNEIEILSKIHS--P 109
LLG G GSVY V VA+K K++ IS V E+ +L K+ S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR-ISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 110 RLVNLLGFSNDSKDRLLVVE----------FMSN-GTLYDVLHSNNRPLNWGRRIRLALQ 158
++ LL + +L++E F++ G L + L R W Q
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARSFFW--------Q 118
Query: 159 VAKAVEILHSEMPPIIHRDIKSANVLIDRNFNA-RLGDFGLALRCGVDNFRFRSTPPAGT 217
V +AV H ++HRDIK N+LID N +L DFG + T GT
Sbjct: 119 VLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGT 172
Query: 218 IGYLDPCYVTPDNLSTKT-DVFSFGILLLEII 248
Y P ++ ++ V+S GILL +++
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,398,783
Number of Sequences: 62578
Number of extensions: 540692
Number of successful extensions: 3246
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 1357
Number of HSP's gapped (non-prelim): 1079
length of query: 487
length of database: 14,973,337
effective HSP length: 103
effective length of query: 384
effective length of database: 8,527,803
effective search space: 3274676352
effective search space used: 3274676352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)