Citrus Sinensis ID: 011390

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
MVPPPPLQLCFTPQLPVLLLFLFLLLILSPSQNVAGVGINYGTLGNNLPSPKKVAQLLQSTIIDKVKIYDTNPEILEAFANTGIDLIVAVENYHVSNISTDTASADEWLSTRVLPFLPATSVVAIVVGNEYLTADGNQMMRMNPKALVQAMQNMHAALLARGLERKIKVTTPHSMAVLASSFPPSASTFAPDITPTMTSILAFLADTGAPFMVNAYPYFAYRDNPSSVNLEYALLGGSAGVGINASSSGSGGGLYAVHDPKGYVYTNMLDAQIDAVRTAINGLGFGNRSIKITVSESGWPSKGDSAATPENAKTYNTRLIERAQSNKGTPMRPKENIEVFVFALFNENKKEGGVSERNFGIFNGDGSKVYQVDLSCQFCSDDEMTFEKISSGVSRGPSVWCVAKPHADEKVLQSVLDFCCGPGGVDCREIDRSGGCFEPEKLHAHASYAMNAYYQMHGRNYWNCDFKGTGLVTFSDPSYGTCRYSQQ
cccccccccccccHHHHHHHHHHHHHHHHccccccccEEECcccccccccHHHHHHHHHHccccEEEECcccHHHHHHHHccccEEEEEcccccHHHHHccHHHHHHHHHHccccccccccEEEEEEccCECccccccHHHccHHHHHHHHHHHHHHHHHccccccCEEEccccccccccccccccccccccccHHHHHHHHHHHHccccEEEcccccEEccccccccccccEEcccccccccccccccccccccCCccccccccccHHHHHHHHHHHHHHHccccccccCEEEccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEccccccccccccccCCcccccccEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccEEEEcccccccccccccc
******LQLCFTPQLPVLLLFLFLLLILSPSQNVAGVGINYGTLGNNLPSPKKVAQLLQSTIIDKVKIYDTNPEILEAFANTGIDLIVAVENYHVSNISTDTASADEWLSTRVLPFLPATSVVAIVVGNEYLTADGNQMMRMNPKALVQAMQNMHAALLARGLERKIKVTTPHSMAVLASSFPPSASTFAPDITPTMTSILAFLADTGAPFMVNAYPYFAYRDNPSSVNLEYALLGGSAGVGINASSSGSGGGLYAVHDPKGYVYTNMLDAQIDAVRTAINGLGFGNRSIKITVSESGWPSKGDSAATPENAKTYNTRLIERA***********ENIEVFVFALFNENKKEGGVSERNFGIFNGDGSKVYQVDLSCQFCS*************SRGPSVWCVAKPHADEKVLQSVLDFCCGPGGVDCREIDRSGGCFEPEKLHAHASYAMNAYYQMHGRNYWNCDFKGTGLVTFSDPSYGTCRYSQQ
xxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVPPPPLQLCFTPQLPVLLLFLFLLLILSPSQNVAGVGINYGTLGNNLPSPKKVAQLLQSTIIDKVKIYDTNPEILEAFANTGIDLIVAVENYHVSNISTDTASADEWLSTRVLPFLPATSVVAIVVGNEYLTADGNQMMRMNPKALVQAMQNMHAALLARGLERKIKVTTPHSMAVLASSFPPSASTFAPDITPTMTSILAFLADTGAPFMVNAYPYFAYRDNPSSVNLEYALLGGSAGVGINASSSGSGGGLYAVHDPKGYVYTNMLDAQIDAVRTAINGLGFGNRSIKITVSESGWPSKGDSAATPENAKTYNTRLIERAQSNKGTPMRPKENIEVFVFALFNENKKEGGVSERNFGIFNGDGSKVYQVDLSCQFCSDDEMTFEKISSGVSRGPSVWCVAKPHADEKVLQSVLDFCCGPGGVDCREIDRSGGCFEPEKLHAHASYAMNAYYQMHGRNYWNCDFKGTGLVTFSDPSYGTCRYSQQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.2.-.-Glycosylases.probable
3.2.1.-Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.probable
3.2.1.39Glucan endo-1,3-beta-D-glucosidase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GHS, chain A
Confidence level:very confident
Coverage over the Query: 37-240,257-374
View the alignment between query and template
View the model in PyMOL
Template: 2W61, chain A
Confidence level:very confident
Coverage over the Query: 53-222,234-240,265-325,338-486
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
2pff, chain Aprobable Alignment | Template Structure