Query 011394
Match_columns 487
No_of_seqs 418 out of 3730
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 07:14:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011394.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011394hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gwg_A 6-phosphogluconate dehy 100.0 3E-112 1E-116 889.7 46.5 474 6-486 3-478 (484)
2 2p4q_A 6-phosphogluconate dehy 100.0 4E-103 1E-107 828.2 47.5 471 7-485 10-490 (497)
3 2zyd_A 6-phosphogluconate dehy 100.0 1E-102 5E-107 821.6 48.5 465 7-480 15-480 (480)
4 2iz1_A 6-phosphogluconate dehy 100.0 1E-100 3E-105 808.5 49.1 466 7-481 5-473 (474)
5 2pgd_A 6-phosphogluconate dehy 100.0 1.1E-99 4E-104 802.1 47.2 471 8-486 3-476 (482)
6 1pgj_A 6PGDH, 6-PGDH, 6-phosph 100.0 4.8E-97 2E-101 780.3 47.6 467 8-480 2-476 (478)
7 4e21_A 6-phosphogluconate dehy 100.0 3.1E-52 1.1E-56 422.7 29.8 321 7-466 22-357 (358)
8 3obb_A Probable 3-hydroxyisobu 100.0 7.5E-48 2.6E-52 381.9 26.3 266 6-299 2-277 (300)
9 4gbj_A 6-phosphogluconate dehy 100.0 8.4E-46 2.9E-50 367.2 19.7 263 8-299 6-272 (297)
10 3doj_A AT3G25530, dehydrogenas 100.0 1.3E-38 4.6E-43 317.9 26.1 266 4-298 18-287 (310)
11 4dll_A 2-hydroxy-3-oxopropiona 100.0 1.7E-38 5.7E-43 318.6 25.7 263 6-298 30-295 (320)
12 3pdu_A 3-hydroxyisobutyrate de 100.0 4E-38 1.4E-42 311.0 24.1 262 7-297 1-266 (287)
13 3pef_A 6-phosphogluconate dehy 100.0 8.5E-38 2.9E-42 308.7 25.8 261 8-297 2-266 (287)
14 3qha_A Putative oxidoreductase 100.0 6.9E-38 2.4E-42 310.7 24.9 260 7-299 15-286 (296)
15 3g0o_A 3-hydroxyisobutyrate de 100.0 1.2E-37 4.3E-42 309.9 24.8 265 5-298 5-275 (303)
16 2h78_A Hibadh, 3-hydroxyisobut 100.0 4.2E-36 1.4E-40 298.6 27.0 263 6-297 2-275 (302)
17 3l6d_A Putative oxidoreductase 100.0 2E-35 6.9E-40 294.3 23.6 263 5-299 7-276 (306)
18 3qsg_A NAD-binding phosphogluc 100.0 2.5E-33 8.7E-38 279.8 21.2 255 6-298 23-284 (312)
19 1vpd_A Tartronate semialdehyde 100.0 6.2E-32 2.1E-36 267.9 24.7 261 7-296 5-269 (299)
20 4ezb_A Uncharacterized conserv 100.0 8.7E-33 3E-37 276.5 18.4 253 6-298 23-286 (317)
21 3cky_A 2-hydroxymethyl glutara 100.0 3.4E-31 1.2E-35 262.8 26.3 261 7-296 4-269 (301)
22 2gf2_A Hibadh, 3-hydroxyisobut 100.0 7.6E-31 2.6E-35 259.7 24.8 262 8-297 1-272 (296)
23 1yb4_A Tartronic semialdehyde 100.0 2.9E-31 1E-35 262.5 21.4 261 6-296 2-266 (295)
24 2cvz_A Dehydrogenase, 3-hydrox 100.0 9E-31 3.1E-35 258.1 21.3 258 7-296 1-260 (289)
25 2uyy_A N-PAC protein; long-cha 100.0 8.6E-30 2.9E-34 254.7 25.8 261 7-296 30-294 (316)
26 4a7p_A UDP-glucose dehydrogena 100.0 1E-28 3.6E-33 256.4 23.1 254 8-291 9-297 (446)
27 3gg2_A Sugar dehydrogenase, UD 100.0 5.9E-28 2E-32 251.9 22.5 254 8-291 3-293 (450)
28 3pid_A UDP-glucose 6-dehydroge 100.0 1.2E-27 3.9E-32 246.4 24.4 252 5-291 34-312 (432)
29 3g79_A NDP-N-acetyl-D-galactos 100.0 9.2E-28 3.2E-32 250.6 21.0 255 6-291 17-325 (478)
30 1i36_A Conserved hypothetical 99.9 2.2E-26 7.5E-31 223.9 18.2 245 8-298 1-248 (264)
31 2q3e_A UDP-glucose 6-dehydroge 99.9 4.6E-26 1.6E-30 239.4 20.9 256 6-291 4-304 (467)
32 3ojo_A CAP5O; rossmann fold, c 99.9 8.4E-26 2.9E-30 232.9 22.2 202 8-226 12-250 (431)
33 2y0c_A BCEC, UDP-glucose dehyd 99.9 9.6E-25 3.3E-29 229.3 25.9 258 7-296 8-307 (478)
34 2o3j_A UDP-glucose 6-dehydroge 99.9 3.3E-25 1.1E-29 233.4 22.1 256 6-291 8-310 (481)
35 1mv8_A GMD, GDP-mannose 6-dehy 99.9 1.8E-24 6.1E-29 225.5 21.3 253 8-291 1-293 (436)
36 1dlj_A UDP-glucose dehydrogena 99.9 4.7E-23 1.6E-27 212.4 23.9 251 8-291 1-283 (402)
37 3k96_A Glycerol-3-phosphate de 99.9 1.5E-23 5.2E-28 212.3 18.9 286 7-312 29-350 (356)
38 3vtf_A UDP-glucose 6-dehydroge 99.9 1.1E-22 3.7E-27 209.5 21.7 255 4-291 18-309 (444)
39 3dtt_A NADP oxidoreductase; st 99.9 7.6E-24 2.6E-28 204.0 11.7 179 6-201 18-232 (245)
40 2ew2_A 2-dehydropantoate 2-red 99.9 3.9E-22 1.3E-26 198.3 14.1 265 6-296 2-306 (316)
41 2dpo_A L-gulonate 3-dehydrogen 99.9 7.7E-21 2.6E-25 189.4 16.9 196 4-227 3-225 (319)
42 1zej_A HBD-9, 3-hydroxyacyl-CO 99.8 4.8E-21 1.6E-25 188.2 14.2 187 7-227 12-205 (293)
43 1evy_A Glycerol-3-phosphate de 99.8 1.7E-21 5.9E-26 198.4 8.9 274 9-312 17-344 (366)
44 2ahr_A Putative pyrroline carb 99.8 4.6E-20 1.6E-24 178.7 18.0 227 6-265 2-236 (259)
45 3c24_A Putative oxidoreductase 99.8 1.9E-20 6.5E-25 184.3 14.9 200 7-227 11-229 (286)
46 1z82_A Glycerol-3-phosphate de 99.8 3.5E-21 1.2E-25 193.8 9.8 275 7-312 14-325 (335)
47 2qyt_A 2-dehydropantoate 2-red 99.8 2.9E-20 9.9E-25 185.1 13.7 252 7-291 8-307 (317)
48 3d1l_A Putative NADP oxidoredu 99.8 2.2E-20 7.6E-25 181.7 12.3 197 7-227 10-211 (266)
49 1ks9_A KPA reductase;, 2-dehyd 99.8 3.6E-21 1.2E-25 189.1 5.6 256 8-296 1-285 (291)
50 1txg_A Glycerol-3-phosphate de 99.8 2.2E-19 7.5E-24 180.3 17.9 201 8-223 1-243 (335)
51 1yj8_A Glycerol-3-phosphate de 99.8 1.1E-19 3.6E-24 185.8 15.2 284 7-314 21-369 (375)
52 2izz_A Pyrroline-5-carboxylate 99.8 1.5E-18 5.1E-23 173.6 22.0 195 7-227 22-229 (322)
53 1yqg_A Pyrroline-5-carboxylate 99.8 1.6E-19 5.6E-24 175.1 14.1 234 8-296 1-252 (263)
54 1x0v_A GPD-C, GPDH-C, glycerol 99.8 3.1E-18 1E-22 173.4 18.1 202 7-222 8-257 (354)
55 3ggo_A Prephenate dehydrogenas 99.8 1E-17 3.4E-22 166.9 20.7 170 7-195 33-218 (314)
56 3gt0_A Pyrroline-5-carboxylate 99.8 1.8E-17 6E-22 159.5 21.6 192 7-227 2-205 (247)
57 2g5c_A Prephenate dehydrogenas 99.8 2.1E-17 7.1E-22 161.9 19.5 176 7-201 1-192 (281)
58 4e12_A Diketoreductase; oxidor 99.8 4.8E-17 1.6E-21 159.7 21.4 197 7-227 4-223 (283)
59 3k6j_A Protein F01G10.3, confi 99.7 5.1E-17 1.7E-21 168.3 18.0 193 6-228 53-268 (460)
60 3ktd_A Prephenate dehydrogenas 99.7 2.2E-17 7.6E-22 165.6 14.9 177 1-195 2-200 (341)
61 1jay_A Coenzyme F420H2:NADP+ o 99.7 4.9E-17 1.7E-21 152.4 16.3 179 8-201 1-200 (212)
62 3tri_A Pyrroline-5-carboxylate 99.7 6.6E-16 2.3E-20 151.3 24.3 243 7-289 3-256 (280)
63 3mog_A Probable 3-hydroxybutyr 99.7 3.9E-17 1.3E-21 171.4 16.5 189 7-227 5-221 (483)
64 2rcy_A Pyrroline carboxylate r 99.7 3E-17 1E-21 159.0 14.5 184 6-227 3-199 (262)
65 1bg6_A N-(1-D-carboxylethyl)-L 99.7 2.5E-17 8.6E-22 166.7 13.1 277 7-297 4-327 (359)
66 1f0y_A HCDH, L-3-hydroxyacyl-C 99.7 2.3E-16 7.8E-21 156.3 19.8 193 6-227 14-237 (302)
67 2f1k_A Prephenate dehydrogenas 99.7 3.2E-16 1.1E-20 153.2 17.9 178 8-207 1-191 (279)
68 3b1f_A Putative prephenate deh 99.7 1.9E-16 6.4E-21 155.8 14.9 160 7-182 6-181 (290)
69 2yjz_A Metalloreductase steap4 99.5 5.2E-18 1.8E-22 158.0 0.0 158 7-192 19-192 (201)
70 4huj_A Uncharacterized protein 99.7 9.8E-17 3.4E-21 151.6 8.7 161 6-188 22-204 (220)
71 3hwr_A 2-dehydropantoate 2-red 99.7 2.1E-15 7E-20 150.5 18.4 249 6-290 18-303 (318)
72 2i76_A Hypothetical protein; N 99.7 7.9E-17 2.7E-21 157.6 7.1 183 7-220 2-190 (276)
73 3ghy_A Ketopantoate reductase 99.6 9.7E-16 3.3E-20 154.0 13.7 249 7-290 3-312 (335)
74 2pv7_A T-protein [includes: ch 99.6 3.9E-15 1.3E-19 147.2 17.2 180 7-225 21-204 (298)
75 1wdk_A Fatty oxidation complex 99.6 1.2E-15 4.3E-20 167.4 14.5 190 6-226 313-528 (715)
76 2wtb_A MFP2, fatty acid multif 99.6 2.3E-15 7.9E-20 165.4 16.1 191 6-227 311-527 (725)
77 1zcj_A Peroxisomal bifunctiona 99.6 3.6E-15 1.2E-19 156.1 16.7 190 7-227 37-250 (463)
78 3hn2_A 2-dehydropantoate 2-red 99.6 1.8E-14 6.1E-19 143.3 19.2 253 7-290 2-294 (312)
79 3i83_A 2-dehydropantoate 2-red 99.6 5.3E-15 1.8E-19 147.6 15.1 251 7-290 2-293 (320)
80 3ado_A Lambda-crystallin; L-gu 99.6 7.3E-15 2.5E-19 145.5 15.8 195 6-227 5-225 (319)
81 2raf_A Putative dinucleotide-b 99.6 8.3E-16 2.8E-20 144.1 8.4 152 6-196 18-190 (209)
82 2vns_A Metalloreductase steap3 99.6 6.1E-16 2.1E-20 145.6 7.0 167 6-193 27-205 (215)
83 3dfu_A Uncharacterized protein 99.5 9.3E-14 3.2E-18 131.1 13.4 156 6-213 5-162 (232)
84 4gwg_A 6-phosphogluconate dehy 99.5 3.1E-14 1.1E-18 148.8 8.7 117 324-448 178-299 (484)
85 3g17_A Similar to 2-dehydropan 99.5 1.5E-14 5.1E-19 142.6 5.2 246 7-290 2-275 (294)
86 1np3_A Ketol-acid reductoisome 99.5 3.1E-13 1.1E-17 135.8 13.8 194 7-222 16-223 (338)
87 4fgw_A Glycerol-3-phosphate de 99.5 1.7E-13 5.7E-18 139.0 11.0 272 9-297 36-371 (391)
88 2i99_A MU-crystallin homolog; 99.4 4.8E-15 1.6E-19 147.4 -5.1 137 5-154 133-280 (312)
89 3ego_A Probable 2-dehydropanto 99.4 3.5E-13 1.2E-17 133.6 8.4 243 7-290 2-284 (307)
90 3gvx_A Glycerate dehydrogenase 99.3 2.5E-12 8.7E-17 125.8 7.7 117 8-139 123-240 (290)
91 3c7a_A Octopine dehydrogenase; 99.3 5.2E-11 1.8E-15 122.5 17.4 99 7-109 2-117 (404)
92 3zwc_A Peroxisomal bifunctiona 99.3 2.3E-11 7.9E-16 133.2 15.3 193 7-229 316-531 (742)
93 2gcg_A Glyoxylate reductase/hy 99.3 1.2E-11 4.1E-16 123.7 11.7 112 7-129 155-267 (330)
94 2dbq_A Glyoxylate reductase; D 99.3 2.4E-11 8.2E-16 121.7 12.7 119 7-137 150-269 (334)
95 2w2k_A D-mandelate dehydrogena 99.3 2.4E-11 8.1E-16 122.4 12.7 121 8-138 164-286 (348)
96 3jtm_A Formate dehydrogenase, 99.3 1.7E-11 5.7E-16 123.2 11.0 121 8-138 165-286 (351)
97 2dc1_A L-aspartate dehydrogena 99.2 8.7E-13 3E-17 125.7 1.1 159 8-197 1-165 (236)
98 3gg9_A D-3-phosphoglycerate de 99.2 3E-11 1E-15 121.4 12.0 119 8-137 161-280 (352)
99 3ba1_A HPPR, hydroxyphenylpyru 99.2 4.4E-11 1.5E-15 119.5 11.6 115 7-136 164-279 (333)
100 4dgs_A Dehydrogenase; structur 99.2 4.3E-11 1.5E-15 119.6 10.4 116 8-138 172-288 (340)
101 4g2n_A D-isomer specific 2-hyd 99.2 7.2E-11 2.5E-15 118.2 12.0 120 8-139 174-294 (345)
102 3evt_A Phosphoglycerate dehydr 99.2 8.9E-12 3E-16 123.9 5.3 119 8-138 138-257 (324)
103 2pi1_A D-lactate dehydrogenase 99.2 9.1E-11 3.1E-15 117.2 12.4 119 8-139 142-261 (334)
104 1mx3_A CTBP1, C-terminal bindi 99.2 4.3E-11 1.5E-15 120.2 9.7 118 7-135 168-286 (347)
105 4e5n_A Thermostable phosphite 99.2 3.1E-11 1E-15 120.5 8.4 120 8-138 146-266 (330)
106 1gdh_A D-glycerate dehydrogena 99.2 6.4E-11 2.2E-15 117.8 10.3 118 8-136 147-266 (320)
107 2d0i_A Dehydrogenase; structur 99.2 5.7E-11 2E-15 118.8 9.3 118 7-137 146-264 (333)
108 3hg7_A D-isomer specific 2-hyd 99.2 1.1E-11 3.6E-16 123.2 3.8 119 8-138 141-260 (324)
109 1wwk_A Phosphoglycerate dehydr 99.2 9.3E-11 3.2E-15 116.0 10.5 109 8-128 143-252 (307)
110 2ekl_A D-3-phosphoglycerate de 99.2 6E-11 2E-15 117.7 9.0 118 8-137 143-261 (313)
111 3fr7_A Putative ketol-acid red 99.1 1.6E-10 5.3E-15 118.7 11.7 148 8-169 55-230 (525)
112 1ygy_A PGDH, D-3-phosphoglycer 99.1 1.9E-10 6.4E-15 122.2 12.8 150 8-169 143-307 (529)
113 3pp8_A Glyoxylate/hydroxypyruv 99.1 1.6E-11 5.6E-16 121.6 4.3 119 8-138 140-259 (315)
114 2g76_A 3-PGDH, D-3-phosphoglyc 99.1 1.1E-10 3.6E-15 116.7 10.2 109 8-128 166-275 (335)
115 4hy3_A Phosphoglycerate oxidor 99.1 2.6E-10 8.8E-15 114.9 13.0 117 8-137 177-294 (365)
116 2yq5_A D-isomer specific 2-hyd 99.1 1.2E-10 4E-15 116.6 10.4 118 8-139 149-267 (343)
117 2nac_A NAD-dependent formate d 99.1 7.1E-11 2.4E-15 120.1 8.7 119 8-136 192-311 (393)
118 2j6i_A Formate dehydrogenase; 99.1 1E-10 3.4E-15 118.4 9.0 118 8-135 165-284 (364)
119 1qp8_A Formate dehydrogenase; 99.1 9E-11 3.1E-15 115.8 7.3 112 8-135 125-237 (303)
120 3k5p_A D-3-phosphoglycerate de 99.1 1.3E-10 4.6E-15 118.5 7.5 117 8-138 157-274 (416)
121 3oet_A Erythronate-4-phosphate 99.1 1.4E-10 4.7E-15 117.1 7.4 117 8-139 120-241 (381)
122 1j4a_A D-LDH, D-lactate dehydr 99.1 3.9E-10 1.3E-14 112.8 10.2 117 8-137 147-264 (333)
123 1sc6_A PGDH, D-3-phosphoglycer 99.0 2.1E-10 7.1E-15 117.5 7.0 107 8-128 146-253 (404)
124 2cuk_A Glycerate dehydrogenase 99.0 2.2E-10 7.6E-15 113.4 6.8 112 7-136 144-256 (311)
125 2o4c_A Erythronate-4-phosphate 99.0 5.5E-10 1.9E-14 113.0 8.3 115 8-137 117-236 (380)
126 1dxy_A D-2-hydroxyisocaproate 99.0 6.6E-10 2.3E-14 111.1 7.7 117 8-138 146-263 (333)
127 1xdw_A NAD+-dependent (R)-2-hy 99.0 6.3E-10 2.2E-14 111.2 7.0 117 8-138 147-264 (331)
128 1y81_A Conserved hypothetical 99.0 1.2E-09 4.2E-14 94.9 7.7 104 8-132 15-122 (138)
129 1lss_A TRK system potassium up 98.9 1.1E-08 3.9E-13 88.0 13.4 120 4-133 1-122 (140)
130 2d5c_A AROE, shikimate 5-dehyd 98.9 1.7E-09 6E-14 104.5 9.1 108 9-131 118-227 (263)
131 2rir_A Dipicolinate synthase, 98.9 2.5E-09 8.6E-14 105.4 9.0 138 8-168 158-296 (300)
132 2hk9_A Shikimate dehydrogenase 98.9 1.3E-09 4.5E-14 106.1 6.1 110 7-131 129-240 (275)
133 2duw_A Putative COA-binding pr 98.8 2.6E-09 8.8E-14 93.7 5.7 104 7-131 13-122 (145)
134 1hyh_A L-hicdh, L-2-hydroxyiso 98.8 2.9E-08 1E-12 98.2 11.7 100 7-111 1-125 (309)
135 3oj0_A Glutr, glutamyl-tRNA re 98.8 7.9E-09 2.7E-13 90.3 6.6 92 7-110 21-112 (144)
136 1x7d_A Ornithine cyclodeaminas 98.7 5.5E-09 1.9E-13 105.0 4.5 122 5-133 127-250 (350)
137 3c85_A Putative glutathione-re 98.7 1.2E-07 4E-12 86.1 12.8 116 8-133 40-159 (183)
138 3d4o_A Dipicolinate synthase s 98.7 5.2E-08 1.8E-12 95.6 11.3 113 8-135 156-268 (293)
139 4hkt_A Inositol 2-dehydrogenas 98.7 1.4E-07 4.8E-12 94.0 13.6 113 7-131 3-119 (331)
140 3llv_A Exopolyphosphatase-rela 98.7 2E-07 6.8E-12 80.7 12.5 117 6-133 5-123 (141)
141 3uuw_A Putative oxidoreductase 98.6 1.9E-07 6.5E-12 92.1 13.1 111 7-130 6-121 (308)
142 2z2v_A Hypothetical protein PH 98.6 3.6E-08 1.2E-12 99.8 8.0 114 7-130 16-129 (365)
143 3ic5_A Putative saccharopine d 98.6 1.9E-07 6.4E-12 77.7 11.1 107 6-120 4-111 (118)
144 3fwz_A Inner membrane protein 98.6 2.3E-07 7.9E-12 80.5 12.1 117 7-133 7-125 (140)
145 3euw_A MYO-inositol dehydrogen 98.6 1.8E-07 6.1E-12 93.8 12.2 114 6-130 3-120 (344)
146 3q2i_A Dehydrogenase; rossmann 98.6 2.7E-07 9.1E-12 92.9 13.3 114 6-130 12-130 (354)
147 2ewd_A Lactate dehydrogenase,; 98.6 1E-07 3.5E-12 94.6 10.1 100 7-111 4-124 (317)
148 1omo_A Alanine dehydrogenase; 98.6 5.3E-08 1.8E-12 96.9 7.4 117 5-133 123-241 (322)
149 2egg_A AROE, shikimate 5-dehyd 98.6 8.9E-08 3.1E-12 94.1 8.9 117 7-131 141-261 (297)
150 3ezy_A Dehydrogenase; structur 98.6 2.8E-07 9.6E-12 92.3 12.4 114 7-130 2-119 (344)
151 1a5z_A L-lactate dehydrogenase 98.6 2.1E-07 7.2E-12 92.4 11.2 98 8-111 1-119 (319)
152 3db2_A Putative NADPH-dependen 98.6 3.6E-07 1.2E-11 91.9 13.1 114 7-131 5-122 (354)
153 3e9m_A Oxidoreductase, GFO/IDH 98.6 3.3E-07 1.1E-11 91.3 12.5 116 6-132 4-124 (330)
154 3kb6_A D-lactate dehydrogenase 98.6 1.7E-07 5.7E-12 93.5 9.8 119 8-139 142-261 (334)
155 1pzg_A LDH, lactate dehydrogen 98.5 5.2E-07 1.8E-11 90.0 13.0 102 6-111 8-135 (331)
156 2hjr_A Malate dehydrogenase; m 98.5 4.3E-07 1.5E-11 90.4 12.4 99 7-110 14-133 (328)
157 3cea_A MYO-inositol 2-dehydrog 98.5 4.8E-07 1.6E-11 90.6 12.5 119 1-130 2-127 (346)
158 3rc1_A Sugar 3-ketoreductase; 98.5 8.6E-07 2.9E-11 89.1 13.4 113 7-130 27-144 (350)
159 2ho3_A Oxidoreductase, GFO/IDH 98.5 7.2E-07 2.5E-11 88.6 12.7 116 7-133 1-120 (325)
160 1tlt_A Putative oxidoreductase 98.5 7.4E-07 2.5E-11 88.3 12.6 112 7-131 5-121 (319)
161 1guz_A Malate dehydrogenase; o 98.5 6E-07 2.1E-11 88.7 11.8 97 8-109 1-119 (310)
162 2g1u_A Hypothetical protein TM 98.5 2.5E-07 8.4E-12 81.7 8.1 120 3-133 15-137 (155)
163 3mz0_A Inositol 2-dehydrogenas 98.5 7.4E-07 2.5E-11 89.3 12.1 114 7-129 2-120 (344)
164 3hdj_A Probable ornithine cycl 98.5 1.6E-07 5.5E-12 92.8 6.9 117 4-132 118-237 (313)
165 2v6b_A L-LDH, L-lactate dehydr 98.5 7.9E-07 2.7E-11 87.6 11.7 99 8-111 1-119 (304)
166 2glx_A 1,5-anhydro-D-fructose 98.5 1.6E-06 5.4E-11 86.2 14.1 115 8-133 1-120 (332)
167 2p4q_A 6-phosphogluconate dehy 98.5 2.8E-07 9.5E-12 96.9 8.8 116 324-447 183-303 (497)
168 1t2d_A LDH-P, L-lactate dehydr 98.5 1.1E-06 3.7E-11 87.3 12.4 100 6-110 3-128 (322)
169 1xea_A Oxidoreductase, GFO/IDH 98.4 1.1E-06 3.6E-11 87.3 12.0 113 7-131 2-119 (323)
170 3abi_A Putative uncharacterize 98.4 6.4E-07 2.2E-11 90.6 10.5 125 3-139 13-139 (365)
171 1lld_A L-lactate dehydrogenase 98.4 5.6E-07 1.9E-11 89.1 9.7 101 6-111 6-127 (319)
172 1v8b_A Adenosylhomocysteinase; 98.4 4.8E-07 1.6E-11 93.9 9.3 99 8-120 258-357 (479)
173 2hmt_A YUAA protein; RCK, KTN, 98.4 8.7E-07 3E-11 76.3 9.6 100 6-109 5-106 (144)
174 2iz1_A 6-phosphogluconate dehy 98.4 4.5E-07 1.5E-11 94.9 8.9 116 324-447 179-300 (474)
175 3ec7_A Putative dehydrogenase; 98.4 1.4E-06 4.9E-11 87.7 12.1 113 8-129 24-141 (357)
176 3l4b_C TRKA K+ channel protien 98.4 1.7E-06 5.9E-11 80.7 11.8 117 8-133 1-119 (218)
177 3don_A Shikimate dehydrogenase 98.4 7.4E-08 2.5E-12 93.5 2.3 111 7-130 117-230 (277)
178 3ohs_X Trans-1,2-dihydrobenzen 98.4 2.7E-06 9.1E-11 84.8 13.6 115 7-131 2-122 (334)
179 3u62_A Shikimate dehydrogenase 98.4 3.6E-07 1.2E-11 87.5 6.7 105 9-128 110-216 (253)
180 1ur5_A Malate dehydrogenase; o 98.4 2.1E-06 7E-11 84.8 12.3 99 7-110 2-121 (309)
181 2p2s_A Putative oxidoreductase 98.4 1.7E-06 6E-11 86.2 11.8 115 6-130 3-121 (336)
182 3d64_A Adenosylhomocysteinase; 98.4 7.6E-07 2.6E-11 92.7 9.0 97 8-118 278-375 (494)
183 3h9u_A Adenosylhomocysteinase; 98.4 7.4E-07 2.5E-11 90.9 8.6 91 8-112 212-302 (436)
184 3c1a_A Putative oxidoreductase 98.4 7.3E-07 2.5E-11 88.2 8.4 134 7-168 10-147 (315)
185 1iuk_A Hypothetical protein TT 98.3 3E-07 1E-11 79.9 4.7 105 8-131 14-122 (140)
186 2pgd_A 6-phosphogluconate dehy 98.3 7.7E-07 2.6E-11 93.4 8.5 116 324-447 176-296 (482)
187 3e18_A Oxidoreductase; dehydro 98.3 3.2E-06 1.1E-10 85.2 12.8 112 7-130 5-120 (359)
188 3phh_A Shikimate dehydrogenase 98.3 3.4E-07 1.2E-11 88.2 4.8 110 7-131 118-229 (269)
189 2zyd_A 6-phosphogluconate dehy 98.3 5.4E-07 1.9E-11 94.4 6.7 114 324-445 188-306 (480)
190 4had_A Probable oxidoreductase 98.3 3.9E-06 1.3E-10 84.0 12.8 116 5-130 21-141 (350)
191 3p2y_A Alanine dehydrogenase/p 98.3 6.7E-07 2.3E-11 90.1 6.5 98 8-109 185-303 (381)
192 1ydw_A AX110P-like protein; st 98.3 4.7E-06 1.6E-10 84.0 12.7 120 6-132 5-128 (362)
193 3m2t_A Probable dehydrogenase; 98.3 2.2E-06 7.5E-11 86.4 9.7 113 7-129 5-122 (359)
194 4dio_A NAD(P) transhydrogenase 98.3 1.1E-06 3.7E-11 89.3 7.3 97 8-109 191-313 (405)
195 1leh_A Leucine dehydrogenase; 98.3 1.5E-06 5E-11 87.5 8.1 109 8-131 174-282 (364)
196 2d59_A Hypothetical protein PH 98.2 9E-07 3.1E-11 77.3 5.3 104 8-132 23-130 (144)
197 3evn_A Oxidoreductase, GFO/IDH 98.2 2.8E-06 9.5E-11 84.5 9.4 116 6-132 4-124 (329)
198 3e82_A Putative oxidoreductase 98.2 6.7E-06 2.3E-10 83.0 12.3 113 5-130 5-122 (364)
199 1h6d_A Precursor form of gluco 98.2 4.5E-06 1.6E-10 86.3 11.2 120 7-132 83-207 (433)
200 1ldn_A L-lactate dehydrogenase 98.2 7.9E-06 2.7E-10 80.8 11.8 103 4-110 3-125 (316)
201 1oju_A MDH, malate dehydrogena 98.2 7.5E-06 2.6E-10 80.0 11.2 98 8-110 1-120 (294)
202 3moi_A Probable dehydrogenase; 98.2 1.2E-05 4.2E-10 81.7 13.3 114 7-131 2-120 (387)
203 1zh8_A Oxidoreductase; TM0312, 98.2 1.3E-05 4.3E-10 80.2 13.1 116 5-130 16-137 (340)
204 3o8q_A Shikimate 5-dehydrogena 98.2 1.6E-06 5.4E-11 84.3 6.2 112 7-128 126-239 (281)
205 4gmf_A Yersiniabactin biosynth 98.2 1.9E-06 6.6E-11 87.1 7.0 121 1-131 1-124 (372)
206 3f4l_A Putative oxidoreductase 98.2 3E-06 1E-10 84.9 8.0 113 7-130 2-120 (345)
207 1y6j_A L-lactate dehydrogenase 98.2 8.7E-06 3E-10 80.6 11.0 101 6-110 6-125 (318)
208 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.1 3.4E-06 1.2E-10 88.3 8.2 115 324-447 178-298 (478)
209 2i6t_A Ubiquitin-conjugating e 98.1 5.1E-06 1.7E-10 81.7 8.9 96 6-110 13-127 (303)
210 3ce6_A Adenosylhomocysteinase; 98.1 6.2E-06 2.1E-10 86.1 9.8 91 8-112 275-365 (494)
211 3gvi_A Malate dehydrogenase; N 98.1 1.6E-05 5.4E-10 78.8 12.3 100 7-111 7-127 (324)
212 3bio_A Oxidoreductase, GFO/IDH 98.1 4.7E-06 1.6E-10 82.0 8.2 107 7-129 9-120 (304)
213 2nvw_A Galactose/lactose metab 98.1 1.4E-05 4.8E-10 83.6 12.2 115 8-130 40-170 (479)
214 3d0o_A L-LDH 1, L-lactate dehy 98.1 1.5E-05 5.2E-10 78.8 11.7 101 6-110 5-125 (317)
215 3gvp_A Adenosylhomocysteinase 98.1 3.4E-06 1.2E-10 85.9 7.0 90 8-112 221-311 (435)
216 3kux_A Putative oxidoreductase 98.1 1.9E-05 6.4E-10 79.2 12.5 111 7-130 7-122 (352)
217 3u3x_A Oxidoreductase; structu 98.1 1.8E-05 6E-10 79.8 12.2 112 8-129 27-142 (361)
218 1p77_A Shikimate 5-dehydrogena 98.1 2.6E-06 8.9E-11 82.5 5.9 117 7-131 119-237 (272)
219 3n58_A Adenosylhomocysteinase; 98.1 9.4E-06 3.2E-10 82.8 10.0 90 8-112 248-338 (464)
220 2ixa_A Alpha-N-acetylgalactosa 98.1 2E-05 6.9E-10 81.7 12.9 119 7-130 20-146 (444)
221 3ulk_A Ketol-acid reductoisome 98.1 1.3E-05 4.3E-10 81.1 10.4 89 8-108 38-132 (491)
222 3pqe_A L-LDH, L-lactate dehydr 98.1 2E-05 6.9E-10 78.1 11.7 102 5-110 3-124 (326)
223 3dty_A Oxidoreductase, GFO/IDH 98.1 1.7E-05 5.9E-10 81.0 11.2 116 8-130 13-140 (398)
224 3p7m_A Malate dehydrogenase; p 98.1 2.3E-05 7.8E-10 77.6 11.7 99 7-110 5-124 (321)
225 3l9w_A Glutathione-regulated p 98.0 2E-05 6.7E-10 80.9 11.4 118 5-133 2-122 (413)
226 2vhw_A Alanine dehydrogenase; 98.0 5.4E-06 1.9E-10 84.1 7.1 94 8-108 169-268 (377)
227 1obb_A Maltase, alpha-glucosid 98.0 3.1E-05 1.1E-09 80.5 12.6 74 7-83 3-87 (480)
228 4gqa_A NAD binding oxidoreduct 98.0 2.3E-05 7.9E-10 80.3 11.6 113 8-130 27-151 (412)
229 1npy_A Hypothetical shikimate 98.0 4.2E-06 1.4E-10 80.9 5.5 112 8-133 120-236 (271)
230 1id1_A Putative potassium chan 98.0 9E-05 3.1E-09 64.8 13.7 115 8-131 4-123 (153)
231 3tl2_A Malate dehydrogenase; c 98.0 4.5E-05 1.5E-09 75.3 12.9 99 7-110 8-129 (315)
232 1nyt_A Shikimate 5-dehydrogena 98.0 2.1E-05 7.2E-10 76.0 10.3 112 8-128 120-232 (271)
233 3ldh_A Lactate dehydrogenase; 98.0 2.7E-05 9.1E-10 77.1 11.1 101 6-111 20-141 (330)
234 3qy9_A DHPR, dihydrodipicolina 98.0 1.5E-05 5.3E-10 75.5 9.0 85 7-113 3-88 (243)
235 4fb5_A Probable oxidoreductase 98.0 4.5E-05 1.5E-09 77.1 13.0 111 9-129 27-148 (393)
236 3v5n_A Oxidoreductase; structu 98.0 5.3E-05 1.8E-09 77.9 13.4 116 8-130 38-165 (417)
237 3btv_A Galactose/lactose metab 98.0 2.1E-05 7.3E-10 81.3 10.5 119 8-130 21-150 (438)
238 3i23_A Oxidoreductase, GFO/IDH 98.0 2.3E-05 8E-10 78.5 10.0 114 7-130 2-120 (349)
239 1gpj_A Glutamyl-tRNA reductase 97.9 2E-05 6.8E-10 80.7 9.3 96 7-109 167-267 (404)
240 3fef_A Putative glucosidase LP 97.9 3.7E-05 1.2E-09 79.3 11.1 73 8-84 6-86 (450)
241 3nep_X Malate dehydrogenase; h 97.9 3.6E-05 1.2E-09 75.9 10.6 99 8-111 1-121 (314)
242 4e21_A 6-phosphogluconate dehy 97.9 8.1E-06 2.8E-10 82.2 6.0 85 215-311 259-344 (358)
243 1u8x_X Maltose-6'-phosphate gl 97.9 3.5E-05 1.2E-09 80.1 10.9 74 8-84 29-113 (472)
244 3gdo_A Uncharacterized oxidore 97.9 4.6E-05 1.6E-09 76.6 11.5 112 6-130 4-120 (358)
245 1ez4_A Lactate dehydrogenase; 97.9 5.7E-05 2E-09 74.7 11.8 100 8-111 6-124 (318)
246 2d4a_B Malate dehydrogenase; a 97.9 5.2E-05 1.8E-09 74.6 11.3 97 9-110 1-118 (308)
247 2axq_A Saccharopine dehydrogen 97.9 4.4E-05 1.5E-09 79.4 11.3 116 7-131 23-141 (467)
248 2eez_A Alanine dehydrogenase; 97.9 2.1E-05 7.2E-10 79.5 8.4 95 8-109 167-267 (369)
249 1x13_A NAD(P) transhydrogenase 97.9 1.5E-05 5.2E-10 81.4 7.3 93 8-109 173-293 (401)
250 2zqz_A L-LDH, L-lactate dehydr 97.9 7.6E-05 2.6E-09 74.0 12.1 102 6-111 8-128 (326)
251 3fhl_A Putative oxidoreductase 97.9 3.1E-05 1E-09 78.0 9.1 112 6-130 4-120 (362)
252 3fi9_A Malate dehydrogenase; s 97.9 9.8E-05 3.4E-09 73.6 12.5 75 5-82 6-85 (343)
253 2nu8_A Succinyl-COA ligase [AD 97.8 4E-05 1.4E-09 74.7 9.1 111 6-131 6-120 (288)
254 1ff9_A Saccharopine reductase; 97.8 8E-05 2.7E-09 77.2 11.7 115 7-131 3-121 (450)
255 3pwz_A Shikimate dehydrogenase 97.8 1.5E-05 5.2E-10 77.0 5.8 112 7-128 120-233 (272)
256 4ina_A Saccharopine dehydrogen 97.8 5.3E-05 1.8E-09 77.5 9.9 120 7-131 1-138 (405)
257 3jyo_A Quinate/shikimate dehyd 97.8 4.3E-05 1.5E-09 74.3 8.6 116 8-130 128-249 (283)
258 3do5_A HOM, homoserine dehydro 97.8 4.4E-05 1.5E-09 75.7 8.8 125 7-137 2-146 (327)
259 3vku_A L-LDH, L-lactate dehydr 97.8 0.0001 3.5E-09 73.0 11.3 102 5-110 7-127 (326)
260 2xxj_A L-LDH, L-lactate dehydr 97.8 0.0001 3.5E-09 72.6 11.1 100 8-111 1-119 (310)
261 1s6y_A 6-phospho-beta-glucosid 97.8 8.6E-05 2.9E-09 76.8 11.0 75 7-84 7-94 (450)
262 3oqb_A Oxidoreductase; structu 97.8 0.00011 3.8E-09 74.4 11.7 113 7-130 6-138 (383)
263 4h3v_A Oxidoreductase domain p 97.8 0.00012 4.3E-09 73.7 11.9 111 9-129 8-132 (390)
264 4aj2_A L-lactate dehydrogenase 97.8 0.00015 5.1E-09 71.9 12.0 101 6-111 18-139 (331)
265 4gbj_A 6-phosphogluconate dehy 97.8 0.00013 4.6E-09 71.3 11.4 105 324-442 167-271 (297)
266 1f06_A MESO-diaminopimelate D- 97.8 3.7E-05 1.3E-09 76.1 7.4 87 7-110 3-91 (320)
267 1lc0_A Biliverdin reductase A; 97.7 7E-05 2.4E-09 73.2 9.1 116 1-133 1-123 (294)
268 3oa2_A WBPB; oxidoreductase, s 97.7 0.00011 3.8E-09 72.6 9.9 115 6-130 2-128 (318)
269 1pjc_A Protein (L-alanine dehy 97.7 6.8E-05 2.3E-09 75.5 8.3 99 8-110 168-269 (361)
270 1l7d_A Nicotinamide nucleotide 97.7 5.2E-05 1.8E-09 77.0 7.3 94 8-109 173-295 (384)
271 3o9z_A Lipopolysaccaride biosy 97.7 0.00012 4E-09 72.2 9.4 115 6-130 2-127 (312)
272 1mld_A Malate dehydrogenase; o 97.7 0.00019 6.6E-09 70.7 10.9 98 8-110 1-119 (314)
273 1smk_A Malate dehydrogenase, g 97.7 0.00013 4.4E-09 72.4 9.3 98 6-110 7-127 (326)
274 2aef_A Calcium-gated potassium 97.6 0.00013 4.5E-09 68.5 8.4 114 7-133 9-125 (234)
275 3upl_A Oxidoreductase; rossman 97.6 0.0006 2.1E-08 70.0 13.7 115 7-129 23-161 (446)
276 1nvt_A Shikimate 5'-dehydrogen 97.6 8.9E-05 3E-09 72.2 7.0 115 8-130 129-250 (287)
277 3ing_A Homoserine dehydrogenas 97.6 0.00014 4.7E-09 72.0 8.3 129 6-137 3-148 (325)
278 3obb_A Probable 3-hydroxyisobu 97.6 0.00013 4.5E-09 71.5 8.1 108 324-443 166-277 (300)
279 3mtj_A Homoserine dehydrogenas 97.6 0.00035 1.2E-08 71.9 11.5 118 8-137 11-141 (444)
280 3ip3_A Oxidoreductase, putativ 97.6 0.00012 4.1E-09 72.8 7.7 115 7-128 2-120 (337)
281 1oi7_A Succinyl-COA synthetase 97.5 0.00016 5.4E-09 70.4 8.1 111 6-131 6-120 (288)
282 3fbt_A Chorismate mutase and s 97.5 0.00024 8.4E-09 68.8 9.3 109 8-131 123-235 (282)
283 4ew6_A D-galactose-1-dehydroge 97.5 0.00028 9.4E-09 70.1 10.0 107 8-131 26-137 (330)
284 3ond_A Adenosylhomocysteinase; 97.5 0.0002 7E-09 74.1 9.1 90 8-111 266-355 (488)
285 3tnl_A Shikimate dehydrogenase 97.5 0.0003 1E-08 69.2 9.7 120 8-130 155-283 (315)
286 2x0j_A Malate dehydrogenase; o 97.5 0.00067 2.3E-08 66.0 11.6 99 8-111 1-121 (294)
287 4f3y_A DHPR, dihydrodipicolina 97.5 0.00015 5.2E-09 69.8 6.7 95 7-113 7-109 (272)
288 2yv1_A Succinyl-COA ligase [AD 97.4 0.00029 9.9E-09 68.8 8.5 110 7-131 13-126 (294)
289 1c1d_A L-phenylalanine dehydro 97.4 0.00065 2.2E-08 67.8 11.1 108 8-131 176-283 (355)
290 4g65_A TRK system potassium up 97.4 0.00017 5.7E-09 75.0 6.8 87 6-96 2-90 (461)
291 3c8m_A Homoserine dehydrogenas 97.4 0.00022 7.5E-09 70.9 7.3 125 8-137 7-152 (331)
292 2czc_A Glyceraldehyde-3-phosph 97.4 0.00052 1.8E-08 68.2 9.5 94 7-107 2-109 (334)
293 1b8p_A Protein (malate dehydro 97.3 0.0012 4.1E-08 65.4 11.7 101 6-109 4-134 (329)
294 3ius_A Uncharacterized conserv 97.3 0.00035 1.2E-08 67.2 7.5 70 6-83 4-73 (286)
295 1j5p_A Aspartate dehydrogenase 97.3 0.00023 7.9E-09 67.4 5.9 109 7-138 12-125 (253)
296 1edz_A 5,10-methylenetetrahydr 97.3 3.8E-05 1.3E-09 75.5 0.4 90 8-110 178-277 (320)
297 1nvm_B Acetaldehyde dehydrogen 97.3 0.00052 1.8E-08 67.5 8.5 94 7-110 4-106 (312)
298 3ngx_A Bifunctional protein fo 97.3 0.00049 1.7E-08 65.8 7.8 73 8-110 151-224 (276)
299 2vt3_A REX, redox-sensing tran 97.3 8E-05 2.7E-09 69.2 2.2 79 7-95 85-166 (215)
300 3eag_A UDP-N-acetylmuramate:L- 97.3 0.0013 4.4E-08 65.1 11.1 114 6-127 3-135 (326)
301 1o6z_A MDH, malate dehydrogena 97.3 0.0017 5.9E-08 63.5 11.6 99 8-110 1-121 (303)
302 3t4e_A Quinate/shikimate dehyd 97.2 0.0013 4.3E-08 64.7 10.1 118 8-131 149-278 (312)
303 3r6d_A NAD-dependent epimerase 97.2 0.00088 3E-08 61.9 8.6 72 7-83 4-83 (221)
304 2yv2_A Succinyl-COA synthetase 97.2 0.00096 3.3E-08 65.1 9.1 113 7-131 13-127 (297)
305 3hhp_A Malate dehydrogenase; M 97.2 0.0039 1.3E-07 61.2 13.2 97 8-110 1-120 (312)
306 1vl6_A Malate oxidoreductase; 97.1 0.00076 2.6E-08 67.6 7.7 101 7-115 192-301 (388)
307 2fp4_A Succinyl-COA ligase [GD 97.1 0.00067 2.3E-08 66.5 6.8 109 8-131 14-128 (305)
308 1b7g_O Protein (glyceraldehyde 97.1 0.0028 9.6E-08 63.0 11.4 97 7-110 1-110 (340)
309 1ys4_A Aspartate-semialdehyde 97.1 0.00033 1.1E-08 70.3 4.6 99 1-110 1-116 (354)
310 4a26_A Putative C-1-tetrahydro 97.1 0.00078 2.7E-08 65.3 7.1 75 8-110 166-241 (300)
311 3ijp_A DHPR, dihydrodipicolina 97.1 0.00098 3.4E-08 64.5 7.7 98 6-114 20-125 (288)
312 3ff4_A Uncharacterized protein 97.0 0.00067 2.3E-08 57.1 5.3 103 7-131 4-110 (122)
313 1dih_A Dihydrodipicolinate red 97.0 0.0002 6.8E-09 69.2 2.3 98 7-112 5-107 (273)
314 1jw9_B Molybdopterin biosynthe 97.0 0.004 1.4E-07 59.1 10.9 33 8-40 32-65 (249)
315 2b0j_A 5,10-methenyltetrahydro 97.0 0.033 1.1E-06 52.8 16.7 151 57-220 128-280 (358)
316 1p9l_A Dihydrodipicolinate red 97.0 0.014 4.8E-07 55.1 14.4 98 8-133 1-103 (245)
317 3l07_A Bifunctional protein fo 96.9 0.0016 5.6E-08 62.5 7.7 73 8-110 162-235 (285)
318 1b0a_A Protein (fold bifunctio 96.9 0.0014 4.7E-08 63.1 7.2 73 8-110 160-233 (288)
319 1a4i_A Methylenetetrahydrofola 96.9 0.0016 5.5E-08 63.0 7.7 74 8-111 166-240 (301)
320 3p2o_A Bifunctional protein fo 96.9 0.0015 5.1E-08 62.8 7.4 73 8-110 161-234 (285)
321 1cf2_P Protein (glyceraldehyde 96.9 0.0021 7.1E-08 63.9 8.8 97 7-110 1-111 (337)
322 3ew7_A LMO0794 protein; Q8Y8U8 96.9 0.0023 7.8E-08 58.6 8.5 70 8-83 1-71 (221)
323 3qvo_A NMRA family protein; st 96.9 0.00064 2.2E-08 63.7 4.6 73 7-84 23-99 (236)
324 2c2x_A Methylenetetrahydrofola 96.9 0.0013 4.6E-08 63.0 6.8 73 8-110 159-234 (281)
325 3dr3_A N-acetyl-gamma-glutamyl 96.9 0.00093 3.2E-08 66.3 5.6 98 7-111 4-109 (337)
326 3tum_A Shikimate dehydrogenase 96.8 0.0027 9.3E-08 60.9 8.3 116 8-130 126-245 (269)
327 3g0o_A 3-hydroxyisobutyrate de 96.8 0.021 7.2E-07 55.5 14.8 104 324-442 172-275 (303)
328 3e8x_A Putative NAD-dependent 96.8 0.0058 2E-07 56.9 10.2 72 7-83 21-94 (236)
329 4a5o_A Bifunctional protein fo 96.8 0.0025 8.6E-08 61.2 7.7 74 8-111 162-236 (286)
330 3dhn_A NAD-dependent epimerase 96.8 0.0021 7.2E-08 59.3 7.0 72 6-83 3-77 (227)
331 3lk7_A UDP-N-acetylmuramoylala 96.8 0.006 2E-07 63.1 11.1 115 7-129 9-141 (451)
332 1lnq_A MTHK channels, potassiu 96.8 0.0031 1.1E-07 62.5 8.5 113 8-133 116-231 (336)
333 3keo_A Redox-sensing transcrip 96.8 0.00036 1.2E-08 64.4 1.5 82 7-96 84-170 (212)
334 3h2s_A Putative NADH-flavin re 96.8 0.004 1.4E-07 57.2 8.6 40 8-47 1-41 (224)
335 4dll_A 2-hydroxy-3-oxopropiona 96.7 0.027 9.3E-07 55.2 14.7 103 325-442 193-295 (320)
336 2dt5_A AT-rich DNA-binding pro 96.7 0.00025 8.6E-09 65.6 -0.1 80 7-95 80-161 (211)
337 3h8v_A Ubiquitin-like modifier 96.7 0.0059 2E-07 59.2 9.6 127 8-136 37-172 (292)
338 2yyy_A Glyceraldehyde-3-phosph 96.6 0.0058 2E-07 60.8 9.3 96 7-108 2-113 (343)
339 3pef_A 6-phosphogluconate dehy 96.6 0.015 5.1E-07 56.1 12.0 104 324-442 164-267 (287)
340 1u8f_O GAPDH, glyceraldehyde-3 96.6 0.0044 1.5E-07 61.5 8.1 100 7-110 3-124 (335)
341 1xyg_A Putative N-acetyl-gamma 96.6 0.0041 1.4E-07 62.3 7.8 94 8-111 17-115 (359)
342 2ozp_A N-acetyl-gamma-glutamyl 96.6 0.0027 9.2E-08 63.3 6.5 96 7-111 4-102 (345)
343 2ejw_A HDH, homoserine dehydro 96.6 0.00092 3.1E-08 66.2 2.9 85 7-107 3-97 (332)
344 3dqp_A Oxidoreductase YLBE; al 96.5 0.004 1.4E-07 57.3 7.0 72 8-84 1-74 (219)
345 3u95_A Glycoside hydrolase, fa 96.5 0.0022 7.6E-08 66.7 5.7 71 8-81 1-84 (477)
346 3c1o_A Eugenol synthase; pheny 96.5 0.0066 2.3E-07 59.2 8.7 37 4-40 1-38 (321)
347 1up7_A 6-phospho-beta-glucosid 96.5 0.018 6.1E-07 58.8 12.1 74 7-84 2-84 (417)
348 4h7p_A Malate dehydrogenase; s 96.4 0.021 7.3E-07 56.7 11.8 99 9-110 26-152 (345)
349 1hye_A L-lactate/malate dehydr 96.4 0.017 5.8E-07 56.6 11.0 71 8-82 1-83 (313)
350 3e5r_O PP38, glyceraldehyde-3- 96.4 0.0087 3E-07 59.3 8.6 40 8-47 4-47 (337)
351 5mdh_A Malate dehydrogenase; o 96.3 0.015 5E-07 57.6 10.1 101 7-110 3-131 (333)
352 1hdo_A Biliverdin IX beta redu 96.3 0.0065 2.2E-07 54.8 7.0 69 8-83 4-77 (206)
353 3pdu_A 3-hydroxyisobutyrate de 96.3 0.039 1.3E-06 53.1 12.9 104 324-442 164-267 (287)
354 3dfz_A SIRC, precorrin-2 dehyd 96.3 0.026 8.8E-07 52.5 10.7 76 8-94 32-111 (223)
355 1zud_1 Adenylyltransferase THI 96.2 0.03 1E-06 53.1 11.3 123 8-136 29-153 (251)
356 2nqt_A N-acetyl-gamma-glutamyl 96.2 0.0025 8.5E-08 63.6 3.8 94 7-111 9-113 (352)
357 2tmg_A Protein (glutamate dehy 96.2 0.027 9.4E-07 57.1 11.2 175 8-226 210-399 (415)
358 3ged_A Short-chain dehydrogena 96.2 0.016 5.5E-07 54.8 9.0 82 7-109 1-84 (247)
359 3aog_A Glutamate dehydrogenase 96.2 0.017 5.9E-07 58.9 9.6 114 8-131 236-361 (440)
360 4fn4_A Short chain dehydrogena 96.1 0.037 1.3E-06 52.5 11.4 82 9-109 8-93 (254)
361 2gas_A Isoflavone reductase; N 96.1 0.012 4.1E-07 56.8 8.2 34 7-40 2-36 (307)
362 2r6j_A Eugenol synthase 1; phe 96.1 0.012 4.1E-07 57.3 8.2 73 8-82 12-88 (318)
363 2ph5_A Homospermidine synthase 96.1 0.016 5.6E-07 59.6 9.3 99 7-134 13-115 (480)
364 1qyd_A Pinoresinol-lariciresin 96.1 0.017 6E-07 55.8 9.2 73 7-83 4-86 (313)
365 4e6p_A Probable sorbitol dehyd 96.0 0.034 1.2E-06 52.5 10.6 90 1-110 2-92 (259)
366 1vkn_A N-acetyl-gamma-glutamyl 96.0 0.022 7.7E-07 56.6 9.5 92 7-111 13-110 (351)
367 1qyc_A Phenylcoumaran benzylic 96.0 0.016 5.5E-07 55.9 8.2 34 7-40 4-38 (308)
368 4hv4_A UDP-N-acetylmuramate--L 96.0 0.027 9.2E-07 58.9 10.4 112 7-127 22-149 (494)
369 2ep5_A 350AA long hypothetical 96.0 0.01 3.5E-07 59.2 6.8 97 6-110 3-110 (350)
370 1ebf_A Homoserine dehydrogenas 95.9 0.0067 2.3E-07 60.7 5.4 35 6-40 3-42 (358)
371 4g81_D Putative hexonate dehyd 95.8 0.042 1.4E-06 52.2 10.2 83 9-110 10-96 (255)
372 2yfq_A Padgh, NAD-GDH, NAD-spe 95.8 0.019 6.5E-07 58.4 8.1 114 8-131 213-343 (421)
373 1y7t_A Malate dehydrogenase; N 95.8 0.052 1.8E-06 53.3 11.1 73 7-82 4-89 (327)
374 2dvm_A Malic enzyme, 439AA lon 95.8 0.026 8.8E-07 57.8 9.0 111 8-130 187-315 (439)
375 1y1p_A ARII, aldehyde reductas 95.8 0.062 2.1E-06 52.4 11.6 43 6-48 10-53 (342)
376 3aoe_E Glutamate dehydrogenase 95.7 0.043 1.5E-06 55.7 10.4 110 8-131 219-340 (419)
377 3i6i_A Putative leucoanthocyan 95.7 0.027 9.3E-07 55.5 8.6 34 7-40 10-44 (346)
378 3e48_A Putative nucleoside-dip 95.6 0.016 5.4E-07 55.5 6.6 71 8-83 1-75 (289)
379 4fgs_A Probable dehydrogenase 95.6 0.04 1.4E-06 52.8 9.3 82 9-110 30-113 (273)
380 3tfo_A Putative 3-oxoacyl-(acy 95.6 0.031 1E-06 53.3 8.5 83 9-110 6-91 (264)
381 4gx0_A TRKA domain protein; me 95.6 0.01 3.4E-07 63.1 5.5 111 8-133 349-462 (565)
382 3kkj_A Amine oxidase, flavin-c 95.6 0.01 3.5E-07 54.7 4.9 34 8-41 3-36 (336)
383 3dii_A Short-chain dehydrogena 95.6 0.039 1.3E-06 51.7 8.8 81 9-110 4-85 (247)
384 3cps_A Glyceraldehyde 3-phosph 95.5 0.047 1.6E-06 54.3 9.6 97 6-109 16-139 (354)
385 1xgk_A Nitrogen metabolite rep 95.5 0.032 1.1E-06 55.4 8.5 73 7-83 5-83 (352)
386 3hn7_A UDP-N-acetylmuramate-L- 95.5 0.056 1.9E-06 56.9 10.7 113 7-127 19-149 (524)
387 3doj_A AT3G25530, dehydrogenas 95.5 0.11 3.7E-06 50.6 12.1 104 324-442 184-287 (310)
388 1lu9_A Methylene tetrahydromet 95.5 0.046 1.6E-06 52.7 9.2 42 8-49 120-162 (287)
389 4hb9_A Similarities with proba 95.5 0.0096 3.3E-07 59.7 4.5 34 8-41 2-35 (412)
390 4fs3_A Enoyl-[acyl-carrier-pro 95.5 0.076 2.6E-06 50.2 10.5 85 9-109 7-95 (256)
391 3l6e_A Oxidoreductase, short-c 95.4 0.066 2.3E-06 49.8 9.9 83 8-110 4-87 (235)
392 4eso_A Putative oxidoreductase 95.4 0.06 2E-06 50.8 9.7 82 9-110 10-92 (255)
393 2a9f_A Putative malic enzyme ( 95.4 0.019 6.6E-07 57.6 6.2 101 7-115 188-296 (398)
394 3m2p_A UDP-N-acetylglucosamine 95.4 0.011 3.7E-07 57.4 4.3 69 7-82 2-71 (311)
395 1tt5_A APPBP1, amyloid protein 95.3 0.035 1.2E-06 58.4 8.2 125 8-136 33-159 (531)
396 3gvc_A Oxidoreductase, probabl 95.3 0.079 2.7E-06 50.7 10.1 82 9-110 30-113 (277)
397 1t4b_A Aspartate-semialdehyde 95.3 0.05 1.7E-06 54.5 8.9 92 7-110 1-100 (367)
398 7mdh_A Protein (malate dehydro 95.3 0.06 2E-06 53.9 9.4 101 7-110 32-160 (375)
399 2x4g_A Nucleoside-diphosphate- 95.3 0.016 5.5E-07 56.8 5.2 72 6-82 12-86 (342)
400 1yde_A Retinal dehydrogenase/r 95.2 0.085 2.9E-06 50.2 10.1 81 9-110 11-92 (270)
401 2zcu_A Uncharacterized oxidore 95.2 0.043 1.5E-06 52.1 8.0 69 9-82 1-74 (286)
402 3op4_A 3-oxoacyl-[acyl-carrier 95.2 0.11 3.8E-06 48.6 10.7 82 9-110 10-93 (248)
403 3h9e_O Glyceraldehyde-3-phosph 95.2 0.057 1.9E-06 53.2 8.8 49 1-49 1-52 (346)
404 3sju_A Keto reductase; short-c 95.2 0.079 2.7E-06 50.7 9.8 83 9-110 26-111 (279)
405 1nff_A Putative oxidoreductase 95.2 0.11 3.8E-06 49.0 10.7 83 8-110 8-91 (260)
406 3l6d_A Putative oxidoreductase 95.2 0.064 2.2E-06 52.2 9.2 101 325-442 174-275 (306)
407 1xq6_A Unknown protein; struct 95.2 0.034 1.2E-06 51.6 7.0 41 6-46 3-46 (253)
408 4gx0_A TRKA domain protein; me 95.1 0.09 3.1E-06 55.7 11.0 96 7-108 127-225 (565)
409 3f1l_A Uncharacterized oxidore 95.1 0.11 3.7E-06 48.8 10.5 86 9-110 14-102 (252)
410 2x5o_A UDP-N-acetylmuramoylala 95.1 0.059 2E-06 55.3 9.2 113 8-129 6-133 (439)
411 4dpl_A Malonyl-COA/succinyl-CO 95.1 0.019 6.5E-07 57.4 5.2 92 7-111 7-113 (359)
412 4dpk_A Malonyl-COA/succinyl-CO 95.1 0.019 6.5E-07 57.4 5.2 92 7-111 7-113 (359)
413 3guy_A Short-chain dehydrogena 95.1 0.06 2.1E-06 49.7 8.4 42 7-48 1-43 (230)
414 3tjr_A Short chain dehydrogena 95.1 0.11 3.9E-06 50.2 10.7 83 9-110 33-118 (301)
415 3h5n_A MCCB protein; ubiquitin 95.1 0.08 2.7E-06 52.7 9.7 125 7-136 118-244 (353)
416 3hsk_A Aspartate-semialdehyde 95.0 0.025 8.5E-07 56.9 5.8 94 7-111 19-127 (381)
417 1vm6_A DHPR, dihydrodipicolina 95.0 0.087 3E-06 48.7 9.0 96 7-135 12-110 (228)
418 1geg_A Acetoin reductase; SDR 95.0 0.077 2.6E-06 49.9 9.0 83 9-110 4-89 (256)
419 1zem_A Xylitol dehydrogenase; 95.0 0.11 3.9E-06 48.9 10.3 84 8-110 8-94 (262)
420 3o38_A Short chain dehydrogena 95.0 0.071 2.4E-06 50.4 8.8 84 9-110 24-111 (266)
421 3imf_A Short chain dehydrogena 95.0 0.12 4.1E-06 48.6 10.3 85 9-110 8-93 (257)
422 3pwk_A Aspartate-semialdehyde 95.0 0.0086 2.9E-07 60.0 2.3 90 7-111 2-98 (366)
423 2pd6_A Estradiol 17-beta-dehyd 95.0 0.13 4.4E-06 48.3 10.5 93 8-110 8-102 (264)
424 2ehd_A Oxidoreductase, oxidore 95.0 0.13 4.5E-06 47.3 10.4 40 9-48 7-47 (234)
425 3ftp_A 3-oxoacyl-[acyl-carrier 95.0 0.097 3.3E-06 49.8 9.6 85 9-110 29-115 (270)
426 1gee_A Glucose 1-dehydrogenase 94.9 0.062 2.1E-06 50.5 8.1 91 1-110 1-95 (261)
427 4dyv_A Short-chain dehydrogena 94.9 0.12 4.1E-06 49.3 10.2 82 9-110 29-112 (272)
428 3k92_A NAD-GDH, NAD-specific g 94.9 0.046 1.6E-06 55.4 7.5 175 8-226 222-409 (424)
429 3afn_B Carbonyl reductase; alp 94.9 0.044 1.5E-06 51.2 7.0 91 1-110 1-95 (258)
430 3rui_A Ubiquitin-like modifier 94.9 0.21 7.2E-06 49.2 12.0 125 7-133 34-171 (340)
431 4b4u_A Bifunctional protein fo 94.9 0.059 2E-06 52.0 7.8 73 8-110 180-253 (303)
432 3lf2_A Short chain oxidoreduct 94.9 0.14 4.8E-06 48.4 10.5 85 9-110 10-97 (265)
433 3tox_A Short chain dehydrogena 94.9 0.072 2.5E-06 51.0 8.5 83 9-110 9-95 (280)
434 2qrj_A Saccharopine dehydrogen 94.8 0.022 7.5E-07 57.3 4.8 84 6-110 213-302 (394)
435 2r00_A Aspartate-semialdehyde 94.8 0.0082 2.8E-07 59.6 1.7 91 6-111 2-99 (336)
436 2jl1_A Triphenylmethane reduct 94.8 0.029 1E-06 53.4 5.5 70 8-82 1-75 (287)
437 3i1j_A Oxidoreductase, short c 94.8 0.17 5.9E-06 46.9 10.8 86 9-110 16-104 (247)
438 4a7p_A UDP-glucose dehydrogena 94.8 0.052 1.8E-06 55.9 7.7 108 8-133 323-441 (446)
439 3qiv_A Short-chain dehydrogena 94.8 0.084 2.9E-06 49.4 8.6 83 9-110 11-96 (253)
440 2wm3_A NMRA-like family domain 94.8 0.048 1.6E-06 52.4 7.0 71 7-82 5-81 (299)
441 2d8a_A PH0655, probable L-thre 94.8 0.066 2.3E-06 53.0 8.2 95 8-109 169-268 (348)
442 3ucx_A Short chain dehydrogena 94.7 0.1 3.4E-06 49.4 9.1 83 9-110 13-98 (264)
443 3m1a_A Putative dehydrogenase; 94.7 0.099 3.4E-06 49.8 9.1 82 9-110 7-89 (281)
444 3l77_A Short-chain alcohol deh 94.7 0.082 2.8E-06 48.8 8.3 85 8-110 3-90 (235)
445 2q3e_A UDP-glucose 6-dehydroge 94.7 0.14 4.7E-06 53.0 10.8 117 8-133 330-464 (467)
446 3r1i_A Short-chain type dehydr 94.7 0.086 2.9E-06 50.4 8.6 85 9-110 34-119 (276)
447 3v8b_A Putative dehydrogenase, 94.7 0.13 4.4E-06 49.3 9.8 82 10-110 31-115 (283)
448 3n74_A 3-ketoacyl-(acyl-carrie 94.7 0.14 4.8E-06 48.1 10.0 82 9-110 11-93 (261)
449 2wsb_A Galactitol dehydrogenas 94.7 0.2 6.9E-06 46.6 11.0 40 9-48 13-53 (254)
450 1uuf_A YAHK, zinc-type alcohol 94.7 0.38 1.3E-05 47.9 13.6 94 8-110 196-290 (369)
451 3qha_A Putative oxidoreductase 94.7 0.25 8.6E-06 47.6 11.9 102 324-441 174-284 (296)
452 3pk0_A Short-chain dehydrogena 94.7 0.15 5.2E-06 48.1 10.2 84 9-110 11-98 (262)
453 1gad_O D-glyceraldehyde-3-phos 94.7 0.08 2.7E-06 52.2 8.3 42 7-48 1-45 (330)
454 2jah_A Clavulanic acid dehydro 94.6 0.18 6.1E-06 47.1 10.4 83 9-110 9-94 (247)
455 2h7i_A Enoyl-[acyl-carrier-pro 94.6 0.084 2.9E-06 50.1 8.2 91 1-111 1-98 (269)
456 3lyl_A 3-oxoacyl-(acyl-carrier 94.6 0.12 4.2E-06 48.1 9.2 84 9-111 7-93 (247)
457 3tzq_B Short-chain type dehydr 94.6 0.15 5E-06 48.5 9.9 83 9-111 13-96 (271)
458 2cfc_A 2-(R)-hydroxypropyl-COM 94.6 0.12 3.9E-06 48.2 9.0 87 8-110 3-90 (250)
459 2csu_A 457AA long hypothetical 94.6 0.029 1E-06 57.9 5.1 106 8-131 9-126 (457)
460 3oh8_A Nucleoside-diphosphate 94.6 0.024 8.2E-07 59.5 4.5 63 7-82 147-210 (516)
461 4dry_A 3-oxoacyl-[acyl-carrier 94.6 0.15 5.2E-06 48.7 9.9 85 9-110 34-121 (281)
462 3rkr_A Short chain oxidoreduct 94.6 0.1 3.4E-06 49.3 8.5 83 9-110 31-116 (262)
463 1zmt_A Haloalcohol dehalogenas 94.5 0.07 2.4E-06 50.2 7.3 79 9-110 3-82 (254)
464 3b1j_A Glyceraldehyde 3-phosph 94.5 0.1 3.6E-06 51.5 8.8 41 8-48 3-48 (339)
465 1vpd_A Tartronate semialdehyde 94.5 0.6 2.1E-05 44.7 14.2 102 324-441 168-270 (299)
466 3h2z_A Mannitol-1-phosphate 5- 94.5 0.14 4.8E-06 51.5 9.8 110 8-119 1-131 (382)
467 1c0p_A D-amino acid oxidase; a 94.5 0.035 1.2E-06 55.0 5.4 34 7-40 6-39 (363)
468 3gpi_A NAD-dependent epimerase 94.5 0.034 1.2E-06 53.1 5.1 36 7-42 3-38 (286)
469 3zv4_A CIS-2,3-dihydrobiphenyl 94.5 0.14 4.7E-06 49.0 9.5 82 9-110 7-89 (281)
470 1cyd_A Carbonyl reductase; sho 94.5 0.12 4.1E-06 47.8 8.8 42 7-48 7-49 (244)
471 3njr_A Precorrin-6Y methylase; 94.5 0.35 1.2E-05 43.8 11.7 118 8-131 57-176 (204)
472 2gdz_A NAD+-dependent 15-hydro 94.5 0.19 6.3E-06 47.5 10.3 88 9-111 9-97 (267)
473 4dqx_A Probable oxidoreductase 94.5 0.19 6.5E-06 48.0 10.4 80 9-110 28-111 (277)
474 2d2i_A Glyceraldehyde 3-phosph 94.5 0.093 3.2E-06 52.6 8.3 41 8-48 3-48 (380)
475 3gaf_A 7-alpha-hydroxysteroid 94.5 0.088 3E-06 49.6 7.9 83 9-110 13-99 (256)
476 3hm2_A Precorrin-6Y C5,15-meth 94.5 0.21 7.3E-06 43.4 10.0 120 8-132 27-150 (178)
477 3awd_A GOX2181, putative polyo 94.5 0.13 4.3E-06 48.2 8.9 83 9-110 15-100 (260)
478 1pl8_A Human sorbitol dehydrog 94.4 0.21 7.2E-06 49.4 11.0 43 8-50 173-216 (356)
479 3oid_A Enoyl-[acyl-carrier-pro 94.4 0.25 8.4E-06 46.5 10.9 82 9-109 6-91 (258)
480 3tpc_A Short chain alcohol deh 94.4 0.12 4.1E-06 48.6 8.6 83 9-111 9-92 (257)
481 1yqd_A Sinapyl alcohol dehydro 94.4 0.083 2.8E-06 52.7 7.9 94 8-109 189-283 (366)
482 4egf_A L-xylulose reductase; s 94.4 0.19 6.6E-06 47.5 10.1 84 9-110 21-108 (266)
483 4gsl_A Ubiquitin-like modifier 94.4 0.12 4.2E-06 54.7 9.3 125 7-133 326-463 (615)
484 4da9_A Short-chain dehydrogena 94.3 0.16 5.6E-06 48.4 9.6 82 10-110 32-117 (280)
485 2dkn_A 3-alpha-hydroxysteroid 94.3 0.03 1E-06 52.2 4.2 36 7-42 1-37 (255)
486 1orr_A CDP-tyvelose-2-epimeras 94.3 0.14 4.7E-06 50.0 9.2 33 7-39 1-34 (347)
487 2ew8_A (S)-1-phenylethanol deh 94.3 0.2 6.9E-06 46.8 10.0 81 8-110 8-92 (249)
488 3d3w_A L-xylulose reductase; u 94.3 0.15 5.3E-06 47.1 9.1 41 8-48 8-49 (244)
489 1fmc_A 7 alpha-hydroxysteroid 94.3 0.1 3.5E-06 48.6 7.9 84 8-110 12-98 (255)
490 3ak4_A NADH-dependent quinucli 94.3 0.26 8.9E-06 46.3 10.8 82 9-110 14-96 (263)
491 1hdc_A 3-alpha, 20 beta-hydrox 94.3 0.21 7E-06 46.9 10.0 83 8-110 6-89 (254)
492 3grp_A 3-oxoacyl-(acyl carrier 94.3 0.19 6.6E-06 47.6 9.9 81 9-111 28-112 (266)
493 2x5j_O E4PDH, D-erythrose-4-ph 94.3 0.098 3.4E-06 51.7 7.9 41 8-48 3-49 (339)
494 1pqw_A Polyketide synthase; ro 94.2 0.074 2.5E-06 47.8 6.6 40 8-47 40-80 (198)
495 1yb1_A 17-beta-hydroxysteroid 94.2 0.16 5.5E-06 48.1 9.2 84 8-110 32-118 (272)
496 3nrc_A Enoyl-[acyl-carrier-pro 94.2 0.19 6.4E-06 47.9 9.7 82 9-111 28-114 (280)
497 2gn4_A FLAA1 protein, UDP-GLCN 94.2 0.13 4.5E-06 50.7 8.8 41 8-48 22-65 (344)
498 2hjs_A USG-1 protein homolog; 94.2 0.027 9.1E-07 55.9 3.7 90 7-111 6-102 (340)
499 4fc7_A Peroxisomal 2,4-dienoyl 94.2 0.24 8.3E-06 47.1 10.4 83 9-109 29-114 (277)
500 1uls_A Putative 3-oxoacyl-acyl 94.2 0.25 8.5E-06 46.0 10.2 80 9-110 7-87 (245)
No 1
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=100.00 E-value=2.9e-112 Score=889.66 Aligned_cols=474 Identities=48% Similarity=0.828 Sum_probs=439.7
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.||+|||||+|.||.+||++|+++||+|++|||++++++++.+.+.. +.++..+.+++|+++.++.+|+||+|||++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~--g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~ 80 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK--GTKVVGAQSLKEMVSKLKKPRRIILLVKAGQ 80 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTT--TSSCEECSSHHHHHHTBCSSCEEEECSCSSH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccC--CCceeccCCHHHHHhhccCCCEEEEecCChH
Confidence 46799999999999999999999999999999999999998876422 1134557899999987777999999999988
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccccCCCHHHHHHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLK 165 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~ 165 (487)
+++.+++++.+.+.+|++|||+||+.|.++.++.+.+.++|++|+++||+||+.++++|+++|+||++++++.++|+|+.
T Consensus 81 ~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~~im~GG~~ea~~~v~pll~~ 160 (484)
T 4gwg_A 81 AVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSLMPGGNKEAWPHIKTIFQG 160 (484)
T ss_dssp HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCCeeecCCCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhHhhhcc
Q 011394 166 VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLTNEELQNVFTEWNKGELLSFLIEITAD 244 (487)
Q Consensus 166 ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~-~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~ 244 (487)
++.++.+++||+.|+|+.|+||++||+||+++++++++++|++.++++ .| +|++++.++|+.|+.|.++||+++++.+
T Consensus 161 ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~G-ld~~~l~~v~~~w~~G~~~S~l~e~~~~ 239 (484)
T 4gwg_A 161 IAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLG-MAQDEMAQAFEDWNKTELDSFLIEITAN 239 (484)
T ss_dssp HSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHTTTTTCBHHHHHHHH
T ss_pred hcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHcCCCccchHHHHHHH
Confidence 999865788999999999999999999999999999999999999999 88 9999999999999999999999999999
Q ss_pred ccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhccchHHHHHHHhhcCCCCCCCCCCcc
Q 011394 245 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAV 324 (487)
Q Consensus 245 ~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~ 324 (487)
++..+| +.+++++|.|+|.++|||||+|++++|.++|+|+|+|++||++|++|++|++|..+++.+++|.+. ....
T Consensus 240 ~l~~~D-~~g~~~ld~i~d~~~~kgtG~wt~~~A~~~gvp~p~i~~av~~R~~S~~k~~r~~a~~~l~~~~~~---~~~~ 315 (484)
T 4gwg_A 240 ILKFQD-TDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQKF---QFDG 315 (484)
T ss_dssp HHHCBC-TTSSBSGGGSCCCCCSSCTTHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHTTCCCC--C---CCCS
T ss_pred HHhcCC-ccCCccHHHHhccccCcchHHHHHHHHHHcCCCchHHHHHHHHHHHhhchHHHHHHHhhcCCCCcc---cccc
Confidence 998765 456789999999999999999999999999999999999999999999999999999999877421 1245
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCChh
Q 011394 325 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPE 404 (487)
Q Consensus 325 ~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~~ 404 (487)
+..+|+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|++||+++|||+||.
T Consensus 316 ~~~~~~~~~~~al~~~~i~~yaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~ll~~~~ 395 (484)
T 4gwg_A 316 DKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDF 395 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSTTCTTCBHHHHHHHHHHHHCTTCSCGGGSHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHccCceeHHHHHHHHHHHHHhCCCchhhhcCHH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhhHHHHHhhccCCcccccccCCCc-cccccccCCc
Q 011394 405 FAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERIDMEGS-FHTEWFKIAK 483 (487)
Q Consensus 405 ~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~~~~~~~~~~~i~a~rd~fG~H~~~r~d~~~~-~h~~w~~~~~ 483 (487)
|.+.+++.+++||+||..|++.|+|+|++|+||+||++||++++|+|||||||||||+|||+|+|++|. ||++|++++.
T Consensus 396 f~~~~~~~~~~~r~vv~~a~~~gip~P~~s~al~y~~~~r~~~lpanliqaqRd~FGaH~~~r~d~~g~~~h~~w~~~~~ 475 (484)
T 4gwg_A 396 FKSAVENCQDSWRRAVSTGVQAGIPMPCFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGG 475 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSCCTHHHHHHHHHHHHCCCEEETTEEEEEECCCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhccCCCHHHHHHHHHHhhCCcceEecCCCCCccccCcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999995 8999997555
Q ss_pred CCC
Q 011394 484 QSK 486 (487)
Q Consensus 484 ~~~ 486 (487)
+++
T Consensus 476 ~~~ 478 (484)
T 4gwg_A 476 TVS 478 (484)
T ss_dssp ---
T ss_pred Ccc
Confidence 443
No 2
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-103 Score=828.21 Aligned_cols=471 Identities=49% Similarity=0.859 Sum_probs=434.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH-hhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE-RAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
..+|||||+|.||.+||++|+++||+|++|||++++++++.+ ..... ++..+.+++++++.++++|+||+|||++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~---gi~~~~s~~e~v~~l~~aDvVil~Vp~~~ 86 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGK---SIIGATSIEDFISKLKRPRKVMLLVKAGA 86 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTS---SEECCSSHHHHHHTSCSSCEEEECCCSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCC---CeEEeCCHHHHHhcCCCCCEEEEEcCChH
Confidence 358999999999999999999999999999999999998876 31101 36778899999987777999999999988
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccccCCCHHHHHHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLK 165 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~ 165 (487)
+++++++++.+.+++|++|||+||+.|.++.++.+.+.++|++|+++||+|++.++..|+++|+||++++++.++++|+.
T Consensus 87 ~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~~im~gg~~e~~~~v~~ll~~ 166 (497)
T 2p4q_A 87 PVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGPSLMPGGSEEAWPHIKNIFQS 166 (497)
T ss_dssp HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCCeEEecCCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999988888889999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhHhhhcc
Q 011394 166 VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLTNEELQNVFTEWNKGELLSFLIEITAD 244 (487)
Q Consensus 166 ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~-~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~ 244 (487)
++.+. +++||+.++|+.|+|+++||++|++.++++++++|++.++++ .| ++++++.+++..|+.+.+.|++++++.+
T Consensus 167 ~g~~~-dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lG-l~~~~~~~~~~~w~~g~~~S~l~~~~~~ 244 (497)
T 2p4q_A 167 ISAKS-DGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGG-FTDKEISDVFAKWNNGVLDSFLVEITRD 244 (497)
T ss_dssp HSCEE-TTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHTTTTCBHHHHHHHH
T ss_pred hcCcc-CCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHHhcCCccccHHHHHHHH
Confidence 99864 567899999999999999999999999999999999999999 58 9999999999999999999999999988
Q ss_pred ccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhccchHHHHHHHhhcCCCCCCCCCCcc
Q 011394 245 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAV 324 (487)
Q Consensus 245 ~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~ 324 (487)
++..++ |++.+.++.++|.++|||||+|+++.|.++|+|+|++.++|++|++|..+++|..+++.+.+|..+ .....
T Consensus 245 ~l~~~d-~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~~P~~~~av~ar~~s~~k~~r~~~~~~~~gp~~~--~~~~~ 321 (497)
T 2p4q_A 245 ILKFDD-VDGKPLVEKIMDTAGQKGTGKWTAINALDLGMPVTLIGEAVFARCLSALKNERIRASKVLPGPEVP--KDAVK 321 (497)
T ss_dssp HHTCBC-TTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC--TTSCS
T ss_pred HHhcCC-CCCccHHHHHHHhhccchHHHHHHHHHHHcCCCCchHHHHHHHHHhhcchhhHHHHhhhcCCCCcc--ccccc
Confidence 877654 566699999999999999999999999999999999999999999999999999999999887520 01234
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCChh
Q 011394 325 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPE 404 (487)
Q Consensus 325 ~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~~ 404 (487)
+++||+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+|||+||.
T Consensus 322 ~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~~~~ 401 (497)
T 2p4q_A 322 DREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMWRGGCIIRSVFLGQITKAYREEPDLENLLFNKF 401 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHSSSTTCBHHHHHHHHHHHHCTTCSCGGGSHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCchHHHHHHHHHHHHhcCCChhhhhcCHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhhHHHHHhhccCCcccccc--------cCCCcccc
Q 011394 405 FAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERI--------DMEGSFHT 476 (487)
Q Consensus 405 ~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~~~~~~~~~~~i~a~rd~fG~H~~~r~--------d~~~~~h~ 476 (487)
|.+.+++..++|||||..|++.|+|+|++++||+||++||++++|+|||||||||||+|||+|+ |++|.||+
T Consensus 402 f~~~~~~~~~~~r~~v~~a~~~gvp~P~~s~aL~~~~~~~~~~~~a~liqa~Rd~FG~H~~~r~~~~~~~~~~~~~~~h~ 481 (497)
T 2p4q_A 402 FADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYDGYRSERLPANLLQAQRDYFGAHTFRVLPECASDNLPVDKDIHI 481 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTHHHHHHHHHHHSCCCBCCCGGGCCSSSCTTSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchhHHHHHHHHhcCCcceeeccccccccCCCCCeeec
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred ccccCCcCC
Q 011394 477 EWFKIAKQS 485 (487)
Q Consensus 477 ~w~~~~~~~ 485 (487)
+|++++.++
T Consensus 482 ~w~~~~~~~ 490 (497)
T 2p4q_A 482 NWTGHGGNV 490 (497)
T ss_dssp CCC------
T ss_pred ccCCCCCcc
Confidence 997655544
No 3
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=100.00 E-value=1.5e-102 Score=821.57 Aligned_cols=465 Identities=52% Similarity=0.894 Sum_probs=434.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|||||+|.||.+||.+|+++|++|++|||++++++++.+..... ++..+.+++++++.++++|+||+|||++.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~---gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 91 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGK---KLVPYYTVKEFVESLETPRRILLMVKAGAG 91 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTS---CEEECSSHHHHHHTBCSSCEEEECSCSSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCC---CeEEeCCHHHHHhCCCCCCEEEEECCCHHH
Confidence 46899999999999999999999999999999999999887652101 266788999999877779999999999878
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccccCCCHHHHHHHHHHHHHH
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKV 166 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~i 166 (487)
++++++++.+.+++|++|||++|+.+.++.++.+.+.++|++|+++|++||+.++..|+++|+||+++.++.++++|+.+
T Consensus 92 v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~~ 171 (480)
T 2zyd_A 92 TDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKI 171 (480)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCCeEEecCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999889888888899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhHhhhccc
Q 011394 167 AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLTNEELQNVFTEWNKGELLSFLIEITADI 245 (487)
Q Consensus 167 g~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~-~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~ 245 (487)
+.+..+++||+.++|+.|+|+++||++|++.++++++++|++.++++ .| ++++++.+++..|+.|.++|++++++.++
T Consensus 172 g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lG-l~~~~~~~l~~~w~~g~~~s~l~~~~~~~ 250 (480)
T 2zyd_A 172 AAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLN-LTNEELAQTFTEWNNGELSSYLIDITKDI 250 (480)
T ss_dssp SCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHTTTCBHHHHHHHHH
T ss_pred hccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHhcCCCcccHHHHHHHHH
Confidence 98644688999999999999999999999999999999999999999 68 99999999999999999999999999998
Q ss_pred cccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhccchHHHHHHHhhcCCCCCCCCCCccc
Q 011394 246 FGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVD 325 (487)
Q Consensus 246 l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~ 325 (487)
++.++ +.+++.++.++|.++|||||+|+++.|.++|+|+|++.+++++|++|..+++|..+++.+++|.+ ....+
T Consensus 251 l~~~d-~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv~~Pi~~~av~ar~~s~~k~~R~~~~~~~~g~~~----~~~~~ 325 (480)
T 2zyd_A 251 FTKKD-EDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQA----QPAGD 325 (480)
T ss_dssp HHCBC-TTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTCCCHHHHHHHHHHHHHTCHHHHHHHHTTCCCCCC----CCCCC
T ss_pred HhcCC-CCCcchHHHHHHHhcCchHHHHHHHHHHHcCCCCchHHHHHHHHhhhcchhhhHHhhcccCCCCC----CCCCC
Confidence 87654 56679999999999999999999999999999999999999999999999999999999988752 12348
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCChhH
Q 011394 326 KQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEF 405 (487)
Q Consensus 326 ~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~~~ 405 (487)
+++|+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+++|||+||.|
T Consensus 326 ~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~~~~f 405 (480)
T 2zyd_A 326 KAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDACAENPQIANLLLAPYF 405 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSSTTCBTHHHHHHHHHHHCTTCSCGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChHhhhcCHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhhHHHHHhhccCCcccccccCCCcccccccc
Q 011394 406 AKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERIDMEGSFHTEWFK 480 (487)
Q Consensus 406 ~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~~~~~~~~~~~i~a~rd~fG~H~~~r~d~~~~~h~~w~~ 480 (487)
.+.+++..++|||||..|++.|+|+|++++||+||++||++++|+|||||||||||+|||+|+|++|.||++|++
T Consensus 406 ~~~~~~~~~~~r~~v~~a~~~gvp~p~~s~al~~~~~~~~~~~~~~l~qa~Rd~FG~H~~~r~~~~~~~h~~w~~ 480 (480)
T 2zyd_A 406 KQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWLD 480 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTHHHHHHHHHHHHCCCBCBSSSCSCBCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchhhHHHHHHHhcCCCcceecCCCCcccCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=100.00 E-value=9.9e-101 Score=808.54 Aligned_cols=466 Identities=50% Similarity=0.889 Sum_probs=432.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++|||||+|.||.+||.+|+++|++|.+|||++++++++.+..... ++..+.+++++++.++++|+||+|||++.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~---gi~~~~s~~e~v~~l~~aDvVilavp~~~~ 81 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDK---NLVFTKTLEEFVGSLEKPRRIMLMVQAGAA 81 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTS---CEEECSSHHHHHHTBCSSCEEEECCCTTHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCC---CeEEeCCHHHHHhhccCCCEEEEEccCchH
Confidence 36899999999999999999999999999999999999887653111 256788999998876679999999999888
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccccCCCHHHHHHHHHHHHHH
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKV 166 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~i 166 (487)
++.+++++.+.+.+|++|||++|+.+.++.++.+.+.++|++|+++|++|++..+..|+++|+||+++.++.++++|+.+
T Consensus 82 v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~~ 161 (474)
T 2iz1_A 82 TDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMPGGQKEAYDLVAPIFEQI 161 (474)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCCCEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCCeEEecCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888888877899999999999999999999888999999999999999999
Q ss_pred hccCC-CCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhHhhhcc
Q 011394 167 AAQVP-DSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLTNEELQNVFTEWNKGELLSFLIEITAD 244 (487)
Q Consensus 167 g~~~~-~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~-~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~ 244 (487)
+.++. +++||+.++|+.|+|+++||++|++.++++++++|++.++++ .| ++++++.+++..|+.+.+.||+++++.+
T Consensus 162 g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~G-l~~~~~~~l~~~w~~g~~~s~l~~~~~~ 240 (474)
T 2iz1_A 162 AAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILG-LSNAEIQAIFEEWNEGELDSYLIEITKE 240 (474)
T ss_dssp SCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHTTTTTCBHHHHHHHH
T ss_pred hcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHhcCCCccccHHHhhhh
Confidence 98632 578999999999999999999999999999999999999999 68 9999999999999999999999999998
Q ss_pred ccccccCCCCc-hhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhccchHHHHHHHhhcCCCCCCCCCCc
Q 011394 245 IFGIKDDKGDG-YLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQA 323 (487)
Q Consensus 245 ~l~~~~~~~~~-~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~ 323 (487)
++..++ +.++ +.++.++|.++|||||+|+++.|.++|+|+|++.+++++|++|..|++|..+++.+++|.+ ...
T Consensus 241 ~l~~~d-~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~gv~~P~~~~av~ar~~s~~k~~r~~~~~~~~g~~~----~~~ 315 (474)
T 2iz1_A 241 VLKRKD-DEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYKDERVKASKVLSGPAL----DFS 315 (474)
T ss_dssp HTTCBC-SSSSSBGGGGBCSCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC----CCC
T ss_pred HhhcCC-CCCChhHHHHHHHhhcccchHHHHHHHHHHcCCCCchHHHHHHHHHhhhhhhhhHHhhhccCCCCC----cCC
Confidence 876554 5455 8999999999999999999999999999999999999999999999999999999988752 123
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCCh
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 403 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~ 403 (487)
.+++||+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+++|||+||
T Consensus 316 ~~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l~~~~ 395 (474)
T 2iz1_A 316 GDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDD 395 (474)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSCTTCBTTHHHHHHHHHHCTTCCCGGGSH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHhcCCChhhhhcCH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhhHHHHHhhccCCcccccccCCCccccccccC
Q 011394 404 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERIDMEGSFHTEWFKI 481 (487)
Q Consensus 404 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~~~~~~~~~~~i~a~rd~fG~H~~~r~d~~~~~h~~w~~~ 481 (487)
.|.+.+++..++|||||..|++.|+|+|++++||+||++||++++|+|||||||||||+|||+|+|++|.||++|+++
T Consensus 396 ~~~~~~~~~~~~~r~~v~~a~~~~~p~p~~s~al~~~~~~~~~~~~~~l~qa~rd~fg~h~~~r~~~~~~~h~~w~~~ 473 (474)
T 2iz1_A 396 YFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYRSENLPANLIQAQRDYFGAHTYERTDKAGIFHYDWYTE 473 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTHHHHHHHHHHHHCCCBCBSSSSSCBCCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchhhHHHHHHHhcCCccceecCCCCeeeccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999864
No 5
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=100.00 E-value=1.1e-99 Score=802.13 Aligned_cols=471 Identities=49% Similarity=0.831 Sum_probs=433.8
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH-hhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE-RAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
|+|||||+|.||.+||.+|+++|++|++|||++++++++.+ ... +.++..+.+++++++.++.+|+||+|||++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~---g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~ 79 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK---GTKVLGAHSLEEMVSKLKKPRRIILLVKAGQA 79 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTT---TSSCEECSSHHHHHHHBCSSCEEEECSCTTHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcccc---CCCeEEeCCHHHHHhhccCCCEEEEeCCChHH
Confidence 68999999999999999999999999999999999998876 210 01366788999998755569999999999878
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccccCCCHHHHHHHHHHHHHH
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKV 166 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~i 166 (487)
++.+++++.+.+.+|++|||++|+.+.++.++.+.+.+.|++|+++|++|++.++..|+++++||+++.++.++++|+.+
T Consensus 80 v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~~i~~gg~~e~~~~v~~ll~~~ 159 (482)
T 2pgd_A 80 VDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGI 159 (482)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCCeEEeCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888888888888899999999999999999999889999999999999999999
Q ss_pred hccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHhhccCcchhhhHhhhccc
Q 011394 167 AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV-GKLTNEELQNVFTEWNKGELLSFLIEITADI 245 (487)
Q Consensus 167 g~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~-g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~ 245 (487)
+.++.+++||+.++|+.|.|+++||++|++.++++++++|++.++++. | ++++++.+++..|+.+.+.|++.+++.++
T Consensus 160 g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G-~~~~~~~~~~~~w~~g~~~S~l~~~~~~~ 238 (482)
T 2pgd_A 160 AAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLG-LGHKEMAKAFEEWNKTELDSFLIEITASI 238 (482)
T ss_dssp SCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHTTTTTCBHHHHHHHHH
T ss_pred hhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cCHHHHHHHHHHhcCCCcCchHHHHHhHH
Confidence 987545689999999999999999999999999999999999999999 8 99999999999999998999999998887
Q ss_pred cccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhccchHHHHHHHhhcCCCCCCCCCCccc
Q 011394 246 FGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVD 325 (487)
Q Consensus 246 l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~ 325 (487)
+..++ +++++.++.+++.++||+||+|+++.|.++|+|+|++.+++++|+.+..|++|..+++.+++|... ....+
T Consensus 239 l~~~d-~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~~P~i~~av~~~~~s~~k~~r~~~~~~~~g~~~~---~~~~~ 314 (482)
T 2pgd_A 239 LKFQD-ADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQNI---PFEGD 314 (482)
T ss_dssp HHCBC-TTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC---CCCSC
T ss_pred hhccC-CCCCeeecccccccccccHHHHHHHHHHHcCCCcchHHHHHHHHhhhhhhhHHHHHhhhcCCCCcc---ccCcC
Confidence 77654 677789999999999999999999999999999999988899999999999999999999887521 12347
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCChhH
Q 011394 326 KQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEF 405 (487)
Q Consensus 326 ~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~~~ 405 (487)
.+||+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+||++|+.|
T Consensus 315 ~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l~~~~~~ 394 (482)
T 2pgd_A 315 KKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFF 394 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTTSSSTTCBTHHHHHHHHHHHCTTCSCGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChhhhhcCHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhhHHHHHhhccCCcccccccCCC-ccccccccCCcC
Q 011394 406 AKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERIDMEG-SFHTEWFKIAKQ 484 (487)
Q Consensus 406 ~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~~~~~~~~~~~i~a~rd~fG~H~~~r~d~~~-~~h~~w~~~~~~ 484 (487)
.+.+++.+++|||||..|++.|+|+|++++||+||++|+++++|+|||||||||||+|||+|+|++| .||++|++++.+
T Consensus 395 ~~~~~~~~~~~r~~v~~a~~~g~p~p~~s~al~~~~~~~~~~~~~~l~qa~rd~fG~h~~~r~~~~~~~~h~~w~~~~~~ 474 (482)
T 2pgd_A 395 KSAVENCQDSWRRAISTGVQAGIPMPCFTTALSFYDGYRHAMLPANLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGGS 474 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCSSCTHHHHHHHHHHHHCCCBCCSSSTTCCBCCCCSCSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCcchhHHHHHHhhcCCceeeecCCCCCceecccCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999765554
Q ss_pred CC
Q 011394 485 SK 486 (487)
Q Consensus 485 ~~ 486 (487)
++
T Consensus 475 ~~ 476 (482)
T 2pgd_A 475 VS 476 (482)
T ss_dssp --
T ss_pred cc
Confidence 43
No 6
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=4.8e-97 Score=780.26 Aligned_cols=467 Identities=36% Similarity=0.627 Sum_probs=428.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc-CCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE-GDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~-g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
|+|||||+|.||.+||.+|+++|++|++|||++++++++.+..... ...++..+.+++++++.++++|+||+|||++.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 5899999999999999999999999999999999999888752100 000256778999998866679999999999878
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccccCCCHHHHHHHHHHHHHH
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKV 166 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~i 166 (487)
++.+++++.+.+.+|++|||++|+.+.++.++.+.+.+.|++|+++|++|++..+..|+++++||+++.++.++++|+.+
T Consensus 82 v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~~ 161 (478)
T 1pgj_A 82 TDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGPAFFPGGTLSVWEEIRPIVEAA 161 (478)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCCEEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCCeEeccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888888888888899999999999999999999888999999999999999999
Q ss_pred hccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhc-cCcchhhhHhhhccc
Q 011394 167 AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWN-KGELLSFLIEITADI 245 (487)
Q Consensus 167 g~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~-~~~~~s~~~~~~~~~ 245 (487)
+.+..+++||+.++|+.|+|+++|+++|++.++.+++++|++.++++.| ++++++.+++..|+ .|.+.|++.+++.++
T Consensus 162 g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G-~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~ 240 (478)
T 1pgj_A 162 AAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMG-LNNDEVAAVLEDWKSKNFLKSYMLDISIAA 240 (478)
T ss_dssp SCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHTSTTCBHHHHHHHHH
T ss_pred cccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHhccCCCcCchHHHhhchh
Confidence 9875467899999999999999999999999999999999999999888 99999999999999 888899999999887
Q ss_pred cccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhccchHHHHHHHhhcCCCCCCCCCCc-c
Q 011394 246 FGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQA-V 324 (487)
Q Consensus 246 l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~-~ 324 (487)
+..++ +.+.+.++.+.|.++|||||+|+++.|.++|+|+|++.++|++|++|..+++|..+++.+++|..+ .... .
T Consensus 241 l~~~d-~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~~Pi~~~av~~r~ls~~~~~r~~~~~~l~~~~~~--~~~~~~ 317 (478)
T 1pgj_A 241 ARAKD-KDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVPAPSLNMAVVSRQFTMYKTERQANASNAPGITQS--PGYTLK 317 (478)
T ss_dssp HHCBC-TTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTHHHHHHHHHHSTTTTCC--CCCCCS
T ss_pred hhcCC-CCChhHHHHHHHHhcCccHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCCHHHHHHHhcCCCCcc--cccccc
Confidence 76554 433489999999999999999999999999999999999999999999999999999999877420 0112 3
Q ss_pred ch---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcC
Q 011394 325 DK---QKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLV 401 (487)
Q Consensus 325 ~~---~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~ 401 (487)
+. ..|+++|++|+|++++++|+|||++|++++++|+|++|+.+|++|||+||||||.||+.|.++|+++|++.|||
T Consensus 318 ~~~~~~~~~~~~~~al~~~~~~~yaqg~~~~~~a~~~~~w~l~~~~~a~~wr~gciir~~~l~~i~~a~~~~~~~~~l~- 396 (478)
T 1pgj_A 318 NKSPSGPEIKQLYDSVCIAIISCYAQMFQCLREMDKVHNFGLNLPATIATFRAGCILQGYLLKPMTEAFEKNPNISNLM- 396 (478)
T ss_dssp CCSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHTTSSSSTTCBTTHHHHHHHHHHCTTCSCTT-
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHcCCceeeHHHHHHHHHHHhcCCChhhHH-
Confidence 44 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHhhhhhhHHHHHHH-HHHcCCChHHHHHHHHHHHhhcCCCch-hhHHHHHhhccCCcccccccCCCccccccc
Q 011394 402 DPEFAKEIVDRQSAWRRVVCL-AINSGISTPGMSSSLAYFDSYRRERLP-ANLVQAQRDYFGAHTYERIDMEGSFHTEWF 479 (487)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~v~~-a~~~g~p~p~~~aal~~~~~~~~~~~~-~~~i~a~rd~fG~H~~~r~d~~~~~h~~w~ 479 (487)
+.|.+.+++.+++||+||.. |++.|+|+|++|+||+|||+||+++|| +|||||||||||+|||+|+|++|.||++|+
T Consensus 397 -~~~~~~~~~~~~~~r~~v~~~~~~~g~~~p~~~~~l~y~d~~~~~~l~~~~l~qaqrd~fg~h~~~~~~~~~~~h~~w~ 475 (478)
T 1pgj_A 397 -CAFQTEIRAGLQNYRDMVALITSKLEVSIPVLSASLNYVTAMFTPTLKYGQLVSLQRDVFGRHGYERVDKDGRESFQWP 475 (478)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTCSCCTHHHHHHHHHHHHHCCCEEBSSSSSEECCCCC
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhccccCCcchhHHHHHHhccCceeeecCCCCceecCCC
Confidence 99999999999999999999 999999999999999999999999999 999999999999999999999999999998
Q ss_pred c
Q 011394 480 K 480 (487)
Q Consensus 480 ~ 480 (487)
+
T Consensus 476 ~ 476 (478)
T 1pgj_A 476 E 476 (478)
T ss_dssp C
T ss_pred C
Confidence 5
No 7
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=100.00 E-value=3.1e-52 Score=422.68 Aligned_cols=321 Identities=29% Similarity=0.469 Sum_probs=262.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+|||||||+|.||.+||.+|+++||+|++|||++++++.+.+.+ +..+.+++++++..+.+|+||+|||++ +
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g-------~~~~~s~~e~~~~a~~~DvVi~~vp~~-~ 93 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREG-------IAGARSIEEFCAKLVKPRVVWLMVPAA-V 93 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CBCCSSHHHHHHHSCSSCEEEECSCGG-G
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------CEEeCCHHHHHhcCCCCCEEEEeCCHH-H
Confidence 37999999999999999999999999999999999998887643 567889999998833349999999998 8
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccccCCCHHHHHHHHHHHHHH
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKV 166 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~i 166 (487)
++++++++.+.+.+|++|||+||+.|.+++++.+.+.++|++|+++||+||+.+++.|+++|+||+++++++++++|+.+
T Consensus 94 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~~im~GG~~~a~~~~~~ll~~l 173 (358)
T 4e21_A 94 VDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGYCLMIGGEKQAVERLDPVFRTL 173 (358)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCCEEEEESCHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCCeeeecCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCC-------------CCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCc
Q 011394 167 AAQVPDS-------------GPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGE 233 (487)
Q Consensus 167 g~~~~~~-------------~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~ 233 (487)
+.+.... +++++|+|+.|+|+++|+++|.+.++.+++++|++.++++.| +...
T Consensus 174 g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~-~~~~------------- 239 (358)
T 4e21_A 174 APGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHAN-AGKE------------- 239 (358)
T ss_dssp SCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CC---------------
T ss_pred ccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccc-------------
Confidence 9531000 146899999999999999999999999999999999999876 2211
Q ss_pred chhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhccchHHHHHHHhhcC
Q 011394 234 LLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKS 313 (487)
Q Consensus 234 ~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~~~~~r~~~~~~~~~ 313 (487)
... . ++ +. .
T Consensus 240 --------------~~~-------~-----~~-----------------------~~----------------------~ 248 (358)
T 4e21_A 240 --------------GQG-------A-----DA-----------------------ET----------------------A 248 (358)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------ccc-------c-----cc-----------------------cc----------------------c
Confidence 000 0 00 00 0
Q ss_pred CCCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhC
Q 011394 314 GGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRN 393 (487)
Q Consensus 314 ~~~~~~~~~~~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~ 393 (487)
|- +.+++|+|++|+.+|+++||+||+|+|+||+.+.++|.++
T Consensus 249 ~~--------------------------------------~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~~ 290 (358)
T 4e21_A 249 PL--------------------------------------RNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALLDS 290 (358)
T ss_dssp -----------------------------------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHHHC
T ss_pred cc--------------------------------------ccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHhhC
Confidence 10 0157799999999999999999999999999999999998
Q ss_pred CCCCCCcCChhHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHH-HHHhhcCCCchh-hHHHHHhhccCCcccc
Q 011394 394 ADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA-YFDSYRRERLPA-NLVQAQRDYFGAHTYE 466 (487)
Q Consensus 394 ~~~~~ll~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~-~~~~~~~~~~~~-~~i~a~rd~fG~H~~~ 466 (487)
|.++++. ..+. ++++ +||+|..|.+.|+|+|++++||+ ||.+ +.+++++ |++||||||||+|+++
T Consensus 291 p~~~~~~--~~~~---d~g~--~r~~~~~A~~~gvp~p~~~~al~~~~~s-~~~~~~~~~l~~a~r~~fG~h~~~ 357 (358)
T 4e21_A 291 PDLQEFQ--GRVS---DSGE--GRWTVAAAIDEGVPAHVLSSALYERFSS-RGEDDFANRLLSAMRYEFGGHREK 357 (358)
T ss_dssp TTCTTC----CCC---CCSH--HHHHHHHHHHHTCCCHHHHHHHHHHHHH-TTTTHHHHHHHHHHC---------
T ss_pred CChHHHH--HHHH---hcCc--HHHHHHHHHHcCCChHHHHHHHHHHHHH-CCCcccHHHHHHHHHHhcCCCCCC
Confidence 8765432 2222 2334 49999999999999999999996 6666 7888884 7999999999999985
No 8
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=7.5e-48 Score=381.90 Aligned_cols=266 Identities=21% Similarity=0.284 Sum_probs=240.5
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.|+||||||+|.||.+||++|+++||+|++|||++++++.+.+.+ .+.++|++|+++. +|+||+|||++.
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~G-------a~~a~s~~e~~~~---~dvv~~~l~~~~ 71 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------ASAARSARDAVQG---ADVVISMLPASQ 71 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CEECSSHHHHHTT---CSEEEECCSCHH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcC-------CEEcCCHHHHHhc---CCceeecCCchH
Confidence 467999999999999999999999999999999999999998765 4688999999998 999999999999
Q ss_pred hHHHHHH---HHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHH
Q 011394 86 PVDETIK---TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIED 161 (487)
Q Consensus 86 ~v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ 161 (487)
++++|+. ++.+.+.+|++|||+||+.|.+++++.+.+.++|++|+|+|||||+.+|+.|+ ++|+||+++++++++|
T Consensus 72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p 151 (300)
T 3obb_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARP 151 (300)
T ss_dssp HHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHH
Confidence 9999985 47788999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhh
Q 011394 162 ILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEI 241 (487)
Q Consensus 162 ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~ 241 (487)
+|+.++.+ ++|+|+.|+|+.+|+++|.+.++++++++|++.++++.| +|++.+.+++ +.+...||.++.
T Consensus 152 ~l~~~g~~-------i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~G-ld~~~~~~vl---~~~~~~s~~~~~ 220 (300)
T 3obb_A 152 LFEAMGRN-------IFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANG-LEAKVLAEIM---RRSSGGNWALEV 220 (300)
T ss_dssp HHHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HTSTTCCHHHHH
T ss_pred HHHHhCCC-------EEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHH---HhCcccchHHHh
Confidence 99999976 699999999999999999999999999999999999999 9999999987 567778888887
Q ss_pred hccccc------cccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhc
Q 011394 242 TADIFG------IKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSG 299 (487)
Q Consensus 242 ~~~~l~------~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~ 299 (487)
..+... ..++|.++|.++.+.||++ +++++|++.|+|+|+...+ .++|.++
T Consensus 221 ~~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~------l~~~~A~~~g~~~p~~~~a-~~~~~~a 277 (300)
T 3obb_A 221 YNPWPGVMENAPASRDYSGGFMAQLMAKDLG------LAQEAAQASASSTPMGSLA-LSLYRLL 277 (300)
T ss_dssp CCCSTTTSTTSGGGGTTCSSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHHHHH
T ss_pred hccccchhhhccccccCCccchHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHHH
Confidence 765321 1246889999999999986 8999999999999998765 5666443
No 9
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=8.4e-46 Score=367.19 Aligned_cols=263 Identities=17% Similarity=0.256 Sum_probs=232.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
.||||||+|+||.+||++|+++||+|++|||++++++++.+.+ .+.++|+.|+++. +|+||+|||++.++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G-------~~~~~s~~e~~~~---~dvvi~~l~~~~~~ 75 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLG-------ATVVENAIDAITP---GGIVFSVLADDAAV 75 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTT-------CEECSSGGGGCCT---TCEEEECCSSHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC-------CeEeCCHHHHHhc---CCceeeeccchhhH
Confidence 4899999999999999999999999999999999998877654 5678999999887 99999999999888
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHHHHH
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDILLK 165 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ll~~ 165 (487)
++++ ..+.+.+.++++|||+||+.|.+++++.+.+.++|++|+|+||+|++.++..|+ ++|+||+++++++++|+|+.
T Consensus 76 ~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~ 155 (297)
T 4gbj_A 76 EELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVEN 155 (297)
T ss_dssp HHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeecccchhHHHHHHHHHHH
Confidence 8776 568888999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HhccCCCCCCeEEEeCC-chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcc
Q 011394 166 VAAQVPDSGPCVTYVSK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITAD 244 (487)
Q Consensus 166 ig~~~~~~~~~~~~~G~-~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~ 244 (487)
++.+ ++|+|+ +|+|+.+|+++|.+.++++++++|++.++++.| +|++++.+++ +.+.+.||+++.+.+
T Consensus 156 ~g~~-------i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~G-ld~~~~~~~l---~~~~~~s~~~~~~~~ 224 (297)
T 4gbj_A 156 FVKG-------VFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNG-ISRQSIYEML---TSTLFAAPIFQNYGK 224 (297)
T ss_dssp TCSE-------EEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HTTTTCSHHHHHHHH
T ss_pred hhCC-------eEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HhhcccCchhhccCc
Confidence 9976 588985 899999999999999999999999999999999 9999999987 677788999999888
Q ss_pred ccccccCCCC-chhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhc
Q 011394 245 IFGIKDDKGD-GYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSG 299 (487)
Q Consensus 245 ~l~~~~~~~~-~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~ 299 (487)
.+..+ +|.| +|.++.+.||++ ++++.|+++|+|+|+...+ .++|..+
T Consensus 225 ~~~~~-~~~p~~f~~~l~~KDl~------l~~~~A~~~g~~~p~~~~~-~~~~~~a 272 (297)
T 4gbj_A 225 LVASN-TYEPVAFRFPLGLKDIN------LTLQTASDVNAPMPFADII-RNRFISG 272 (297)
T ss_dssp HHHHT-CCCSCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHHH
T ss_pred cccCC-CCCCccchhHHHHHHHH------HHHHHHHHhCCCChHHHHH-HHHHHHH
Confidence 77664 4665 799999999986 8999999999999987754 6666544
No 10
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-38 Score=317.88 Aligned_cols=266 Identities=19% Similarity=0.297 Sum_probs=239.3
Q ss_pred CCCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 4 GKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 4 ~~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
...||||||||+|.||.+||.+|+++||+|++|||++++++++.+.+ +..+++++++++. +|+||+|||+
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~~~~~~~~~~~~---aDvvi~~vp~ 87 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHG-------ASVCESPAEVIKK---CKYTIAMLSD 87 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------CEECSSHHHHHHH---CSEEEECCSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CeEcCCHHHHHHh---CCEEEEEcCC
Confidence 34678999999999999999999999999999999999999887643 5678899999988 9999999999
Q ss_pred ChhHHHHH---HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHH
Q 011394 84 GAPVDETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYI 159 (487)
Q Consensus 84 ~~~v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v 159 (487)
+.+++.++ +++.+.+.+|++|||+||+.|..++++.+.+.++|++|+++|++|++..+..|+ .+++||++++++++
T Consensus 88 ~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~ 167 (310)
T 3doj_A 88 PCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEES 167 (310)
T ss_dssp HHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHH
T ss_pred HHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHH
Confidence 88899998 788888999999999999999999999998989999999999999999999999 89999999999999
Q ss_pred HHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhH
Q 011394 160 EDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLI 239 (487)
Q Consensus 160 ~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~ 239 (487)
+++|+.++.+ ++++|+.|.|+.+|+++|.+.+.++++++|++.++++.| +|++++.+++. .+...|+++
T Consensus 168 ~~ll~~~g~~-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~d~~~~~~~~~---~~~~~s~~~ 236 (310)
T 3doj_A 168 IPAFDVLGKR-------SFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSG-LSSDTLLDILD---LGAMTNPMF 236 (310)
T ss_dssp HHHHHHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SCHHHHHHHHH---HSTTCCHHH
T ss_pred HHHHHHhCCC-------EEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hcccccHHH
Confidence 9999999976 589999999999999999999999999999999999999 99999999984 466778888
Q ss_pred hhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhh
Q 011394 240 EITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLS 298 (487)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s 298 (487)
+...+.+..+ +|.++|.++.+.||++ .+++.|+++|+|+|++.++ .+.+..
T Consensus 237 ~~~~~~~~~~-~~~~~f~~~~~~KDl~------~~~~~a~~~g~~~p~~~~~-~~~~~~ 287 (310)
T 3doj_A 237 KGKGPSMNKS-SYPPAFPLKHQQKDMR------LALALGDENAVSMPVAAAA-NEAFKK 287 (310)
T ss_dssp HHHHHHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHH
T ss_pred HHHhhhhhcC-CCCCCccHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHH
Confidence 8777666554 5788999999999986 8999999999999998764 555543
No 11
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=1.7e-38 Score=318.56 Aligned_cols=263 Identities=19% Similarity=0.265 Sum_probs=238.1
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.+|||||||+|.||.+||.+|+++|++|++|||++++++++.+.+ +..+++++++++. +|+||+|||++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~~~~~~~e~~~~---aDvVi~~vp~~~ 99 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALG-------ATIHEQARAAARD---ADIVVSMLENGA 99 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CEEESSHHHHHTT---CSEEEECCSSHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC-------CEeeCCHHHHHhc---CCEEEEECCCHH
Confidence 467999999999999999999999999999999999998887653 5678899999887 999999999888
Q ss_pred hHHHHHH--HHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHH
Q 011394 86 PVDETIK--TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (487)
Q Consensus 86 ~v~~vl~--~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (487)
+++.++. ++.+.+.++++|||+||+.|.+++++.+.+.++|++|+++|++|++.++..|+ .+++||+++++++++++
T Consensus 100 ~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~l 179 (320)
T 4dll_A 100 VVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPL 179 (320)
T ss_dssp HHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHH
Confidence 8999887 78888999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhh
Q 011394 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEIT 242 (487)
Q Consensus 163 l~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~ 242 (487)
|+.+ .+ ++++|+.|+|+++|+++|.+.+..+++++|++.++++.| +|++++.+++ +.+.+.||+++..
T Consensus 180 l~~~-~~-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~d~~~~~~~~---~~~~~~s~~~~~~ 247 (320)
T 4dll_A 180 LKVF-GR-------ATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGG-ADMAKVKEAI---TGGFADSRVLQLH 247 (320)
T ss_dssp HHHH-EE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-CCHHHHHHHH---TTSTTCBHHHHTH
T ss_pred HHhc-CC-------EEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HcccccCHHHHHh
Confidence 9999 65 589999999999999999999999999999999999999 9999999987 5667789999887
Q ss_pred ccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhh
Q 011394 243 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLS 298 (487)
Q Consensus 243 ~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s 298 (487)
.+.+..+ +|.++|.++.+.||+. ++++.|+++|+|+|++.++ .+.+..
T Consensus 248 ~~~~l~~-~~~~gf~~~~~~KDl~------~~~~~a~~~g~~~p~~~~~-~~~~~~ 295 (320)
T 4dll_A 248 GQRMVER-DFAPRARLSIQLKDMR------NALATAQEIGFDAPITGLF-EQLYAE 295 (320)
T ss_dssp HHHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHH
T ss_pred hhhhccC-CCCCcccHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHH
Confidence 7766654 5788999999999986 8999999999999998764 555543
No 12
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=4e-38 Score=311.03 Aligned_cols=262 Identities=18% Similarity=0.250 Sum_probs=236.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
||||||||+|.||.+||.+|+++||+|++|||++++.+.+.+.+ +..+++++++++. +|+||+|||++.+
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~~~~~---advvi~~v~~~~~ 70 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALG-------ARQASSPAEVCAA---CDITIAMLADPAA 70 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHT-------CEECSCHHHHHHH---CSEEEECCSSHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------CeecCCHHHHHHc---CCEEEEEcCCHHH
Confidence 57999999999999999999999999999999999999887754 4678899999988 9999999999878
Q ss_pred HHHHH---HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHH
Q 011394 87 VDETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (487)
Q Consensus 87 v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (487)
++.++ +++.+.+.++++|||+||+.|..++++.+.+.++|++|+++|++|++..+..|+ ++++||+++.+++++++
T Consensus 71 ~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~l 150 (287)
T 3pdu_A 71 AREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPA 150 (287)
T ss_dssp HHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHH
T ss_pred HHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHH
Confidence 99998 788888999999999999999999999888888999999999999999999999 89999999999999999
Q ss_pred HHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhh
Q 011394 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEIT 242 (487)
Q Consensus 163 l~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~ 242 (487)
|+.++.+ ++++|+.|.|+.+|+++|.+.+.++++++|++.++++.| +|++++.+++. .+...|++++..
T Consensus 151 l~~~g~~-------~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~~---~~~~~s~~~~~~ 219 (287)
T 3pdu_A 151 FAALGKK-------CLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCG-LDGGQLLEVLD---AGAMANPMFKGK 219 (287)
T ss_dssp HHHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---HSTTCCHHHHHH
T ss_pred HHHhCCC-------EEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hccccChHHHhh
Confidence 9999976 589999999999999999999999999999999999999 99999999984 456778888877
Q ss_pred ccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHh
Q 011394 243 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFL 297 (487)
Q Consensus 243 ~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~ 297 (487)
.+.+..+ +|.++|.++...||++ ++++.|+++|+|+|++.++ .+.+.
T Consensus 220 ~~~~~~~-~~~~~~~~~~~~kd~~------~~~~~a~~~g~~~p~~~~~-~~~~~ 266 (287)
T 3pdu_A 220 GQMLLSG-EFPTSFPLKHMQKDLR------LAVELGDRLGQPLHGAATA-NESFK 266 (287)
T ss_dssp HHHHHHT-CCCCSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHHH
T ss_pred ccccccC-CCCCCCcHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHH
Confidence 7666554 4788899999999975 8999999999999998764 45543
No 13
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=8.5e-38 Score=308.69 Aligned_cols=261 Identities=18% Similarity=0.268 Sum_probs=236.8
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
|||||||+|.||.++|.+|+++||+|++|||++++.+.+.+.+ +..+++++++++. +|+||+|||++.++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~~~~~---aDvvi~~vp~~~~~ 71 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALG-------AERAATPCEVVES---CPVTFAMLADPAAA 71 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------CEECSSHHHHHHH---CSEEEECCSSHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------CeecCCHHHHHhc---CCEEEEEcCCHHHH
Confidence 6899999999999999999999999999999999998887653 5678899999988 99999999987789
Q ss_pred HHHH---HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHHH
Q 011394 88 DETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDIL 163 (487)
Q Consensus 88 ~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ll 163 (487)
+.++ +++.+.+.++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++++++++++|
T Consensus 72 ~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll 151 (287)
T 3pef_A 72 EEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGF 151 (287)
T ss_dssp HHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHH
T ss_pred HHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 9999 888899999999999999999999999998989999999999999999999999 899999999999999999
Q ss_pred HHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhc
Q 011394 164 LKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITA 243 (487)
Q Consensus 164 ~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~ 243 (487)
+.++.+ ++++|+.|.|+.+|+++|.+.+..+++++|++.++++.| +|++++.+++. .+.+.|++++...
T Consensus 152 ~~~g~~-------~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G-~d~~~~~~~~~---~~~~~s~~~~~~~ 220 (287)
T 3pef_A 152 EKMGKK-------IIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAG-LATDAILDVIG---AGAMANPMFALKG 220 (287)
T ss_dssp HHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---HSTTCCHHHHHHH
T ss_pred HHhCCC-------eEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hcccccHHHHHHh
Confidence 999976 589999999999999999999999999999999999999 99999999984 4567788888877
Q ss_pred cccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHh
Q 011394 244 DIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFL 297 (487)
Q Consensus 244 ~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~ 297 (487)
+.+..+ +|.++|.++...||+. ++++.|+++|+|+|++.++ .+.+.
T Consensus 221 ~~~~~~-~~~~~~~~~~~~kd~~------~~~~~a~~~g~~~p~~~~~-~~~~~ 266 (287)
T 3pef_A 221 GLIRDR-NFAPAFPLKHMQKDLR------LAVALGDRVGQPLVASAAA-NELFK 266 (287)
T ss_dssp HHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHHH
T ss_pred hhhhcC-CCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHH
Confidence 766654 5788999999999975 8999999999999998764 55553
No 14
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=6.9e-38 Score=310.71 Aligned_cols=260 Identities=18% Similarity=0.181 Sum_probs=230.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+|||||||+|.||.+||.+|+++||+|++|||++++++++.+.+ ++.+++++++++ +|+||+|||++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~~~~----aDvvi~~vp~~~~ 83 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAG-------ATLADSVADVAA----ADLIHITVLDDAQ 83 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTT-------CEECSSHHHHTT----SSEEEECCSSHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CEEcCCHHHHHh----CCEEEEECCChHH
Confidence 35899999999999999999999999999999999998887653 567889998876 8999999998888
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHHHHH
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDILLK 165 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ll~~ 165 (487)
++.+++++.+.+.++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++.+++++++|+.
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~ 163 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKH 163 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988888899999999999999999999 89999999999999999999
Q ss_pred HhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH------HHHHHhhccCcchhhhH
Q 011394 166 VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEEL------QNVFTEWNKGELLSFLI 239 (487)
Q Consensus 166 ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i------~~v~~~~~~~~~~s~~~ 239 (487)
++.+ ++++|+.|.|+.+|+++|.+.+..+++++|++.++++.| +|++++ .+++ +.+.+.||+.
T Consensus 164 ~g~~-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G-~d~~~~~~~~~~~~~i---~~~~~~s~~~ 232 (296)
T 3qha_A 164 WAAV-------VIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAG-LDLQALGRVVRHTDAL---TGGPGAIMVR 232 (296)
T ss_dssp HEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHH---HCCGGGGCCC
T ss_pred HcCC-------eEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHhhhcchHHHH---hcCcccCHHh
Confidence 9976 589999999999999999999999999999999999999 999999 5555 4566777766
Q ss_pred hhhccccccccCCCCchhH-----HhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhc
Q 011394 240 EITADIFGIKDDKGDGYLV-----DKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSG 299 (487)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~l-----~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~ 299 (487)
+ . +.+.. + |.++|.+ +.+.||++ .+++.|.++|+|+|++..+ .+.|..+
T Consensus 233 ~-~-~~~~~-~-~~~~f~~~~~~~~~~~KD~~------~~~~~a~~~g~~~p~~~~~-~~~~~~~ 286 (296)
T 3qha_A 233 D-N-MKDLE-P-DNFLYQPFLHTRGLGEKDLS------LALALGEAVSVDLPLARLA-YEGLAAG 286 (296)
T ss_dssp S-S-CSCCC-T-TSTTHHHHHHHHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHHH
T ss_pred h-c-hhhhh-c-CCCCCchhhhhhHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHHH
Confidence 5 3 33333 2 7788988 99999986 8899999999999998865 5666444
No 15
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.2e-37 Score=309.90 Aligned_cols=265 Identities=21% Similarity=0.268 Sum_probs=235.0
Q ss_pred CCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCCcEEEEecCC
Q 011394 5 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~~l~~advIi~~vp~ 83 (487)
.++|||||||+|.||.+||.+|+++||+|++|||++++++.+.+.+ ... +.+++|+++. +|+||+|||+
T Consensus 5 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~e~~~~---aDvvi~~vp~ 74 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEG-------ACGAAASAREFAGV---VDALVILVVN 74 (303)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CSEEESSSTTTTTT---CSEEEECCSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC-------CccccCCHHHHHhc---CCEEEEECCC
Confidence 3457999999999999999999999999999999999999888754 334 7788888876 9999999999
Q ss_pred ChhHHHHH---HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHH
Q 011394 84 GAPVDETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYI 159 (487)
Q Consensus 84 ~~~v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v 159 (487)
+..++.++ +++.+.+.++++|||+||+.|..++++.+.+.++|++|+++|++|++..+..|+ .+++||+++.++++
T Consensus 75 ~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~ 154 (303)
T 3g0o_A 75 AAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRL 154 (303)
T ss_dssp HHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHTTCEEEEEECCHHHHHHH
T ss_pred HHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHHH
Confidence 87888888 778888999999999999999999999888888999999999999999999999 89999999999999
Q ss_pred HHHHHHHhccCCCCCCeEEEeCC-chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhh
Q 011394 160 EDILLKVAAQVPDSGPCVTYVSK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFL 238 (487)
Q Consensus 160 ~~ll~~ig~~~~~~~~~~~~~G~-~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~ 238 (487)
+++|+.++.+ ++++|+ .|.|+.+|+++|.+.+..+++++|++.++++.| +|++++.+++ +.+...|++
T Consensus 155 ~~ll~~~g~~-------~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~d~~~~~~~~---~~~~~~s~~ 223 (303)
T 3g0o_A 155 KPVLDAVASN-------VYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAG-IPLDVMYDVV---THAAGNSWM 223 (303)
T ss_dssp HHHHHHHEEE-------EEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TTSTTCCHH
T ss_pred HHHHHHHCCC-------EEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HhcccCCHH
Confidence 9999999976 589998 899999999999999999999999999999999 9999999997 456777888
Q ss_pred HhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhh
Q 011394 239 IEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLS 298 (487)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s 298 (487)
++...+.+..+ +|.++|.++.+.||+. ++++.|+++|+|+|++.++ .+.+..
T Consensus 224 ~~~~~~~~~~~-~~~~~~~~~~~~kD~~------~~~~~a~~~g~~~p~~~~~-~~~~~~ 275 (303)
T 3g0o_A 224 FENRMQHVVDG-DYTPRSAVDIFVKDLG------LVADTAKALRFPLPLASTA-LNMFTS 275 (303)
T ss_dssp HHHHHHHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHH
T ss_pred HHhhhHHHhcC-CCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHH
Confidence 88776655543 5788899999999986 8999999999999998764 555533
No 16
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=100.00 E-value=4.2e-36 Score=298.65 Aligned_cols=263 Identities=21% Similarity=0.288 Sum_probs=235.5
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.||||+|||+|.||.++|.+|+++||+|++|||++++++.+.+.+ +..+++++++++. +|+||+|||++.
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g-------~~~~~~~~~~~~~---aDvvi~~vp~~~ 71 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------ASAARSARDAVQG---ADVVISMLPASQ 71 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CEECSSHHHHHTT---CSEEEECCSCHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC-------CeEcCCHHHHHhC---CCeEEEECCCHH
Confidence 478999999999999999999999999999999999999887653 5678899999887 999999999888
Q ss_pred hHHHHHH---HHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHH
Q 011394 86 PVDETIK---TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIED 161 (487)
Q Consensus 86 ~v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ 161 (487)
+++.++. ++.+.+.++++|||+||+.|..++++.+.+.++|++|+++|+++++.++..|+ ++++||+++.++.+++
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~~~ 151 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARP 151 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccCChhhHhcCCceEEeCCCHHHHHHHHH
Confidence 8999998 88899999999999999999999889888888899999999999999999999 8899999999999999
Q ss_pred HHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhh
Q 011394 162 ILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEI 241 (487)
Q Consensus 162 ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~ 241 (487)
+|+.++.+ ++++|+.|.++++|+++|.+.+.++++++|++.++++.| ++++++.+++ +.+...|+.++.
T Consensus 152 ll~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~ 220 (302)
T 2h78_A 152 LFEAMGRN-------IFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANG-LEAKVLAEIM---RRSSGGNWALEV 220 (302)
T ss_dssp HHHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HTSTTCCHHHHH
T ss_pred HHHHhCCC-------eEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HcCCCCCHHHHH
Confidence 99999976 588999999999999999999999999999999999999 9999999998 455667888887
Q ss_pred hcc-------ccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHh
Q 011394 242 TAD-------IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFL 297 (487)
Q Consensus 242 ~~~-------~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~ 297 (487)
..+ .+.. ++|.++|.++.+.||++ .+++.|+++|+|+|+...+ .+.+.
T Consensus 221 ~~~~~g~~~~~~~~-~~~~~g~~~~~~~kD~~------~~~~~a~~~g~~~p~~~~~-~~~~~ 275 (302)
T 2h78_A 221 YNPWPGVMENAPAS-RDYSGGFMAQLMAKDLG------LAQEAAQASASSTPMGSLA-LSLYR 275 (302)
T ss_dssp CCCSTTTSTTSGGG-GTTCSSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHHH
T ss_pred hCCCcccccccccC-CCCCCCCcHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHH
Confidence 766 5554 35788999999999986 8999999999999998764 45553
No 17
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=100.00 E-value=2e-35 Score=294.32 Aligned_cols=263 Identities=13% Similarity=0.133 Sum_probs=225.5
Q ss_pred CCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 5 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
..+|||||||+|.||.+||++|+++||+|++|||++++++++.+.+ +..+.+++++++. +|+||+|||++
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~e~~~~---aDvVi~~vp~~ 76 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAG-------AHLCESVKAALSA---SPATIFVLLDN 76 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT-------CEECSSHHHHHHH---SSEEEECCSSH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC-------CeecCCHHHHHhc---CCEEEEEeCCH
Confidence 3467999999999999999999999999999999999999888754 4567899999988 99999999998
Q ss_pred hhHHHHHH--HHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHH
Q 011394 85 APVDETIK--TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIED 161 (487)
Q Consensus 85 ~~v~~vl~--~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ 161 (487)
.+++.++. .+.+ +.+|++|||+||+.|..++++.+.+.++|++|+++||+|++..+..+. ++++||++++++++++
T Consensus 77 ~~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~ 155 (306)
T 3l6d_A 77 HATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQHRA 155 (306)
T ss_dssp HHHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHHHH
T ss_pred HHHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcCCHHHHHHHHH
Confidence 77898886 5544 569999999999999999999999999999999999999987776666 8999999999999999
Q ss_pred HHHHHhccCCCCCCeEEEe--CC-chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhh
Q 011394 162 ILLKVAAQVPDSGPCVTYV--SK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFL 238 (487)
Q Consensus 162 ll~~ig~~~~~~~~~~~~~--G~-~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~ 238 (487)
+|+.++.+ ++++ |+ .|+|+.+| .+.++.+++++|++.++++.| +|++++.+++..+.. .+.|++
T Consensus 156 ll~~lg~~-------~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~la~~~G-ld~~~~~~~~~~~~~-~~~s~~ 222 (306)
T 3l6d_A 156 LLEGLAGH-------TVFLPWDEALAFATVLH----AHAFAAMVTFFEAVGAGDRFG-LPVSKTARLLLETSR-FFVADA 222 (306)
T ss_dssp HHHTTCSE-------EEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHhcCC-------EEEecCCCCccHHHHHH----HHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHhhh-hcccHH
Confidence 99999765 5899 97 79999999 566788999999999999999 999999999854310 146888
Q ss_pred HhhhccccccccCCCCc-hhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhhc
Q 011394 239 IEITADIFGIKDDKGDG-YLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSG 299 (487)
Q Consensus 239 ~~~~~~~l~~~~~~~~~-~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s~ 299 (487)
++...+.+..+ +|.++ |.++...||++ ++++.|.+.|+|+|++.++ .+.+..+
T Consensus 223 ~~~~~~~~~~~-~~~~~~~~~~~~~KDl~------~~~~~a~~~g~~~p~~~~~-~~~~~~a 276 (306)
T 3l6d_A 223 LEEAVRRLETQ-DFKGDQARLDVHADAFA------HIAQSLHAQGVWTPVFDAV-CQVVQRA 276 (306)
T ss_dssp HHHHHHHHHHT-CCCTTSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHHH
T ss_pred HHHHHHHHhcC-CCCCCcccHHHHHHHHH------HHHHHHHHcCCCchHHHHH-HHHHHHH
Confidence 88777666554 47764 68999999986 8999999999999998764 5666443
No 18
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=2.5e-33 Score=279.84 Aligned_cols=255 Identities=13% Similarity=0.106 Sum_probs=209.4
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCC--hHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT--TSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~--~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
.||||||||+|.||.+||.+|+++|| +|++|||+ +++.+.+.+.+ +..+++++++++. +|+||+|||
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g-------~~~~~~~~e~~~~---aDvVi~~vp 92 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELG-------VSCKASVAEVAGE---CDVIFSLVT 92 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTT-------CEECSCHHHHHHH---CSEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCC-------CEEeCCHHHHHhc---CCEEEEecC
Confidence 46799999999999999999999999 99999997 57777666543 5678899999888 999999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHc--CCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHH
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL--GLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYI 159 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~--g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v 159 (487)
++. ...+++++.+.+.++++|||+||+.|.+++++.+.+.++ |++|+++|++|++..+ .|. ++++||+.+ +++
T Consensus 93 ~~~-~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~-~g~l~i~vgg~~~--~~~ 168 (312)
T 3qsg_A 93 AQA-ALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPH-GHRVPLVVDGDGA--RRF 168 (312)
T ss_dssp TTT-HHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTT-GGGSEEEEESTTH--HHH
T ss_pred chh-HHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhh-cCCEEEEecCChH--HHH
Confidence 985 445778999999999999999999999999999888888 9999999999976554 566 889999877 899
Q ss_pred HHHHHHHhccCCCCCCeEEEeCC-chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhh
Q 011394 160 EDILLKVAAQVPDSGPCVTYVSK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFL 238 (487)
Q Consensus 160 ~~ll~~ig~~~~~~~~~~~~~G~-~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~ 238 (487)
+++|+.+|.+ ++++|+ .|+|+.+|+++|.+.++.+++++|++.++++.| +|+ ++.+.+. .+. .++.
T Consensus 169 ~~ll~~~g~~-------~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G-ld~-~~~~~l~---~~~-~~~~ 235 (312)
T 3qsg_A 169 QAAFTLYGCR-------IEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMG-LAD-RVLASLD---ASF-PEHH 235 (312)
T ss_dssp HHHHHTTTCE-------EEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHH-HHHHHHH---HHS-GGGT
T ss_pred HHHHHHhCCC-------eEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCH-HHHHHHH---hcC-Cchh
Confidence 9999999976 589998 899999999999999999999999999999999 998 5667764 322 2444
Q ss_pred HhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhh
Q 011394 239 IEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLS 298 (487)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s 298 (487)
++...+.+..+ +|.++|.+ .||++ .+++.|+++|+++|++.++ .+.+..
T Consensus 236 ~~~~~~~~~~~-~~~~g~~~---~KDl~------~~~~~a~~~g~~~pl~~~~-~~~~~~ 284 (312)
T 3qsg_A 236 LRDLALYLVER-NLEHADRR---AHELG------EVAATLCSVGVEPLVAEAG-YRRLTR 284 (312)
T ss_dssp HHHHHHHHHHH-HHHHHHHH---HHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHH
T ss_pred HHHhhhHhhcC-CCCcccch---HHHHH------HHHHHHHHcCCCcHHHHHH-HHHHHH
Confidence 44444444433 35666654 46664 7899999999999998764 455533
No 19
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=6.2e-32 Score=267.95 Aligned_cols=261 Identities=19% Similarity=0.277 Sum_probs=223.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+|||+|||+|.||..++..|.++|++|.+|||++++.+.+.+.+ +..+.+++++++. +|+||+|+|++.+
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG-------AETASTAKAIAEQ---CDVIITMLPNSPH 74 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CEECSSHHHHHHH---CSEEEECCSSHHH
T ss_pred cceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------CeecCCHHHHHhC---CCEEEEECCCHHH
Confidence 46999999999999999999999999999999999988877653 4567789888887 9999999998778
Q ss_pred HHHHH---HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHH
Q 011394 87 VDETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (487)
Q Consensus 87 v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (487)
++.++ +++.+.+.++++||+++++.+.+.+++.+.+.+.|++|+++|+++++..+..+. .+++||+++.++.++++
T Consensus 75 ~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (299)
T 1vpd_A 75 VKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDL 154 (299)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHH
Confidence 88888 678888899999999999998878888888888899999999999988888887 78889999999999999
Q ss_pred HHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhh
Q 011394 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEIT 242 (487)
Q Consensus 163 l~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~ 242 (487)
|+.++.+ ++++++.|++.++|+++|.+.+.++++++|++.++++.| ++++++.+++ ..+...++.+...
T Consensus 155 l~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~~ 223 (299)
T 1vpd_A 155 MKAMAGS-------VVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAG-VNPDLVYQAI---RGGLAGSTVLDAK 223 (299)
T ss_dssp HHTTEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TTSTTCCHHHHHH
T ss_pred HHHHcCC-------eEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HccCCCCHHHHHh
Confidence 9999975 588899999999999999999999999999999999999 9999988886 4455556666544
Q ss_pred ccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHH
Q 011394 243 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARF 296 (487)
Q Consensus 243 ~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~ 296 (487)
.+.+.. +.+.+++.++.+.++++ ++++.|+++|+|+|+..++ .+.+
T Consensus 224 ~~~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~~-~~~~ 269 (299)
T 1vpd_A 224 APMVMD-RNFKPGFRIDLHIKDLA------NALDTSHGVGAQLPLTAAV-MEMM 269 (299)
T ss_dssp HHHHHT-TCCCCSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHH
T ss_pred hhHhhc-CCCCCCCChHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHH
Confidence 444443 34667788888887765 8999999999999998764 4444
No 20
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.7e-33 Score=276.46 Aligned_cols=253 Identities=15% Similarity=0.135 Sum_probs=201.5
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCC-CcEEEEeCCh-------HHHHHHHHhhhhcCCCCccccC-CHHHHHhhcCCCcE
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKG-FPISVYNRTT-------SKVDETVERAKKEGDLPLFGFR-DPESFVNSIQKPRV 76 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G-~~V~v~dr~~-------~~~~~l~~~~~~~g~~~~~~~~-s~~e~~~~l~~adv 76 (487)
++|||||||+|.||.+||.+|+++| ++|++|||++ +..+++.+. ++ ++ +++++++. +|+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~-------g~--~~~s~~e~~~~---aDv 90 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL-------GV--EPLDDVAGIAC---ADV 90 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT-------TC--EEESSGGGGGG---CSE
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC-------CC--CCCCHHHHHhc---CCE
Confidence 3578999999999999999999999 9999999998 334433322 13 56 88888887 999
Q ss_pred EEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHH
Q 011394 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEA 155 (487)
Q Consensus 77 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~ 155 (487)
||+|||++.. ..+++++.+.+.++++|||+||+.|.+++++.+.+.++|++|+++|++|+ ..+..|. ++++||+.+
T Consensus 91 Vi~avp~~~~-~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~-~~a~~g~l~i~vgg~~~- 167 (317)
T 4ezb_A 91 VLSLVVGAAT-KAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMAR-VPPYAEKVPILVAGRRA- 167 (317)
T ss_dssp EEECCCGGGH-HHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSC-STTTGGGSEEEEESTTH-
T ss_pred EEEecCCHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCC-chhhcCCEEEEEeCChH-
Confidence 9999998754 44568899999999999999999999999999989889999999999996 4566666 889999877
Q ss_pred HHHHHHHHHHHhccCCCCCCeEEEeCC-chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcc
Q 011394 156 YKYIEDILLKVAAQVPDSGPCVTYVSK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGEL 234 (487)
Q Consensus 156 ~~~v~~ll~~ig~~~~~~~~~~~~~G~-~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~ 234 (487)
++++++|+.++.+ ++++|+ .|+|+.+|+++|.+.++.+++++|++.++++.| +|++ +.+.+..- +..
T Consensus 168 -~~~~~ll~~~g~~-------v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~G-id~~-~~~~l~~~--~~~ 235 (317)
T 4ezb_A 168 -VEVAERLNALGMN-------LEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAG-VTER-ILDSVQET--FPG 235 (317)
T ss_dssp -HHHHHHHHTTTCE-------EEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHH-HHHHHHHH--STT
T ss_pred -HHHHHHHHHhCCC-------eEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHH-HHHHHHhc--Ccc
Confidence 8999999999965 699998 899999999999999999999999999999999 9995 55554321 112
Q ss_pred hhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhh
Q 011394 235 LSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLS 298 (487)
Q Consensus 235 ~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s 298 (487)
.+| ....+.+..+ +|.++|. +.||++ .+++.|+++|+|+|++.++ .+.+..
T Consensus 236 ~~~--~~~~~~~~~~-~~~~g~~---~~KDl~------~~~~~a~~~g~~~pl~~~~-~~~~~~ 286 (317)
T 4ezb_A 236 LDW--RDVADYYLSR-TFEHGAR---RVTEMT------EAAETIESFGLNAPMSRAA-CETIAA 286 (317)
T ss_dssp SCH--HHHHHHHHHH-HHHHHHH---HHHHHH------HHHHHHHTTTCCCHHHHHH-HHHHHH
T ss_pred ccH--HHhhhhhhcC-CCCCCcc---hHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHH
Confidence 233 2223333332 3555554 356664 8899999999999998764 555433
No 21
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=100.00 E-value=3.4e-31 Score=262.84 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=224.1
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+|||+|||+|.||..++.+|.+.|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|+|.+.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~D~vi~~vp~~~~ 73 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQG-------AQACENNQKVAAA---SDIIFTSLPNAGI 73 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTT-------CEECSSHHHHHHH---CSEEEECCSSHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CeecCCHHHHHhC---CCEEEEECCCHHH
Confidence 47999999999999999999999999999999999988876542 4567789998887 9999999998878
Q ss_pred HHHHHH---HHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHH
Q 011394 87 VDETIK---TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (487)
Q Consensus 87 v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (487)
++.++. ++.+.+.++++||+++++.|...+++.+.+.++|++|+++|+++++..+..|. .+++||+++.++.++++
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~~l 153 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPV 153 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHH
Confidence 888885 78888899999999999998888888888888899999999999998888888 78888999999999999
Q ss_pred HHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhh
Q 011394 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEIT 242 (487)
Q Consensus 163 l~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~ 242 (487)
|+.++.+ ++++++.|+|.++|+++|.+.+..+.++.|++.++++.| ++++++.+++. .+...++.+...
T Consensus 154 l~~~g~~-------~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~~---~~~~~~~~~~~~ 222 (301)
T 3cky_A 154 LSVIGKD-------IYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCG-LKPETMQEIIG---KSSGRSYAMEAK 222 (301)
T ss_dssp HHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---TSTTCBHHHHHH
T ss_pred HHHhcCC-------EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---cCCCCCHHHHHh
Confidence 9999975 478899999999999999999999999999999999999 99999988874 344456666555
Q ss_pred cc-ccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHH
Q 011394 243 AD-IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARF 296 (487)
Q Consensus 243 ~~-~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~ 296 (487)
.+ .+.. +++.+++.++.+.||++ ++++.++++|+|+|+..+. .+.+
T Consensus 223 ~~~~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~~-~~~~ 269 (301)
T 3cky_A 223 MEKFIMS-GDFAGGFAMDLQHKDLG------LALEAGKEGNVPLPMTAMA-TQIF 269 (301)
T ss_dssp CCCCCCT-CCCSSSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHH
T ss_pred hhhhhhc-CCCCCCccHHHHHHHHH------HHHHHHHHhCCCChHHHHH-HHHH
Confidence 55 3333 34677889999988875 8999999999999998753 4444
No 22
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.98 E-value=7.6e-31 Score=259.70 Aligned_cols=262 Identities=18% Similarity=0.273 Sum_probs=219.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
|||+|||+|.||..+|.+|+++|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|+|.+.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~Dvvi~~vp~~~~~ 70 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAG-------EQVVSSPADVAEK---ADRIITMLPTSINA 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTT-------CEECSSHHHHHHH---CSEEEECCSSHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------CeecCCHHHHHhc---CCEEEEeCCCHHHH
Confidence 5899999999999999999999999999999999988876542 5567889998887 99999999988788
Q ss_pred HHHHHH---HhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHHH
Q 011394 88 DETIKT---LSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDIL 163 (487)
Q Consensus 88 ~~vl~~---l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ll 163 (487)
+.++.+ +.+.+.++++||++++..+...+++.+.+.+++..|+++|+++++..+..|. .+++|++++.++.++++|
T Consensus 71 ~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~ 150 (296)
T 2gf2_A 71 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELL 150 (296)
T ss_dssp HHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHH
T ss_pred HHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHH
Confidence 888875 4456788999999999888877777777777889999999999988888888 788999999999999999
Q ss_pred HHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhc
Q 011394 164 LKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITA 243 (487)
Q Consensus 164 ~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~ 243 (487)
+.+|.+ +++++..|+|+..|+++|.+.+..+.+++|++.++++.| ++++++.+++. .+...++++....
T Consensus 151 ~~~g~~-------~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G-~~~~~~~~~~~---~~~~~~~~~~~~~ 219 (296)
T 2gf2_A 151 GCMGSN-------VVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLG-LDPKLLAKILN---MSSGRCWSSDTYN 219 (296)
T ss_dssp TTTEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---TSTTCBHHHHHSC
T ss_pred HHHcCC-------eEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hCcccCHHHHhcC
Confidence 999975 478888999999999999999999999999999999999 99999998874 3444566655432
Q ss_pred c---ccc---cccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHh
Q 011394 244 D---IFG---IKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFL 297 (487)
Q Consensus 244 ~---~l~---~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~ 297 (487)
+ .+. .+.+|.++|.++.+.||++ ++++.|+++|+|+|+..++ .+.+.
T Consensus 220 ~~~~~l~~s~~~~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~~-~~~~~ 272 (296)
T 2gf2_A 220 PVPGVMDGVPSANNYQGGFGTTLMAKDLG------LAQDSATSTKSPILLGSLA-HQIYR 272 (296)
T ss_dssp SSTTTCSSSGGGGTTCSSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHH
T ss_pred CcccccccchhccCCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHH
Confidence 1 111 1234677788998888875 8999999999999998764 45443
No 23
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.97 E-value=2.9e-31 Score=262.49 Aligned_cols=261 Identities=21% Similarity=0.327 Sum_probs=221.2
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
+||||+|||+|.||..+|.+|.+.|++|++|| ++++.+.+.+.+ +..+.+++++++. +|+||+|+|.+.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g-------~~~~~~~~~~~~~---~D~vi~~vp~~~ 70 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLG-------AVNVETARQVTEF---ADIIFIMVPDTP 70 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTT-------CBCCSSHHHHHHT---CSEEEECCSSHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcC-------CcccCCHHHHHhc---CCEEEEECCCHH
Confidence 56899999999999999999999999999999 998888776542 4567789898877 999999999887
Q ss_pred hHHHHHH---HHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHH
Q 011394 86 PVDETIK---TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIED 161 (487)
Q Consensus 86 ~v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ 161 (487)
+++.++. ++.+.+.++++||+++++.|...+++.+.+.++|++|+++|+++++..+..|. .+++|++++.++.+++
T Consensus 71 ~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~ 150 (295)
T 1yb4_A 71 QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKP 150 (295)
T ss_dssp HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHH
Confidence 7888887 78788889999999999988888888888877899999999999988888888 7888999999999999
Q ss_pred HHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhh
Q 011394 162 ILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEI 241 (487)
Q Consensus 162 ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~ 241 (487)
+|+.++.+ ++++++.|.+..+|+++|.+.+.+++++.|++.++++.| ++++++.+++ ..+...++.+..
T Consensus 151 ll~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~ 219 (295)
T 1yb4_A 151 LFDILGKN-------ITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAG-ADPVRVRQAL---MGGFASSRILEV 219 (295)
T ss_dssp HHHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TSSSSCBHHHHH
T ss_pred HHHHhcCC-------EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HcCCCCCHHHHH
Confidence 99999976 588899999999999999999999999999999999999 9999888886 445555666554
Q ss_pred hccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHH
Q 011394 242 TADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARF 296 (487)
Q Consensus 242 ~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~ 296 (487)
..+.+.. +.+.+++..+.+.||++ +.++.++++|+|+|++.++ .+.+
T Consensus 220 ~~~~~~~-~~~~~g~~~~~~~kd~~------~~~~~a~~~g~~~p~~~~~-~~~~ 266 (295)
T 1yb4_A 220 HGERMIN-RTFEPGFKIALHQKDLN------LALQSAKALALNLPNTATC-QELF 266 (295)
T ss_dssp HHHHHHT-TCCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHH
T ss_pred hhHHHhc-CCCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHH
Confidence 4444443 34677888888888875 8899999999999998754 4443
No 24
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.97 E-value=9e-31 Score=258.09 Aligned_cols=258 Identities=24% Similarity=0.297 Sum_probs=218.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
||+|+|||+|.||..+|.+|++ |++|++|||++++.+.+.+.+. ..++ ++++++. +|+||+|+|++.+
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~-------~~~~-~~~~~~~---~D~vi~~v~~~~~ 68 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFG-------SEAV-PLERVAE---ARVIFTCLPTTRE 68 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHC-------CEEC-CGGGGGG---CSEEEECCSSHHH
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCC-------cccC-HHHHHhC---CCEEEEeCCChHH
Confidence 4799999999999999999999 9999999999999988876542 3344 6666666 9999999998867
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHHHHH
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDILLK 165 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ll~~ 165 (487)
++.+++++.+.+.++++||++|+..+...+++.+.+.++|++|+++|+++++..+..|. .+++|++++.++.++++| .
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~ 147 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-A 147 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-T
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-h
Confidence 88899989888999999999999998888888888877789999999999998888888 788899999999999999 9
Q ss_pred HhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcc-
Q 011394 166 VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITAD- 244 (487)
Q Consensus 166 ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~- 244 (487)
++.+ ++++++.+.+.++|+++|.+.+.++++++|++.++++.| ++++++.+++ ..+...+++++...+
T Consensus 148 ~g~~-------~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~~~~~ 216 (289)
T 2cvz_A 148 YAKK-------VVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQG-VSAEKALEVI---NASSGRSNATENLIPQ 216 (289)
T ss_dssp TEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TTSTTCBHHHHHTHHH
T ss_pred hcCC-------eEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cCHHHHHHHH---HccCCCCHHHHHhccc
Confidence 9865 478898999999999999999999999999999999999 9999988887 445555666665544
Q ss_pred ccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHH
Q 011394 245 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARF 296 (487)
Q Consensus 245 ~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~ 296 (487)
.+.. +++.+++.++.+.||++ ++++.++++|+|+|+..+. .+.+
T Consensus 217 ~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~v-~~~~ 260 (289)
T 2cvz_A 217 RVLT-RAFPKTFALGLLVKDLG------IAMGVLDGEKAPSPLLRLA-REVY 260 (289)
T ss_dssp HTTT-SCCCCSSBHHHHHHHHH------HHHHHHTTTCCCCHHHHHH-HHHH
T ss_pred hhhc-CCCCCCcChHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHH
Confidence 2333 34677888999888875 8899999999999998753 4444
No 25
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.97 E-value=8.6e-30 Score=254.69 Aligned_cols=261 Identities=16% Similarity=0.272 Sum_probs=220.0
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+|+|+|||+|.||..+|.+|++.|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|+|++.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~DvVi~av~~~~~ 99 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEG-------ARLGRTPAEVVST---CDITFACVSDPKA 99 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTT-------CEECSCHHHHHHH---CSEEEECCSSHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcC-------CEEcCCHHHHHhc---CCEEEEeCCCHHH
Confidence 37899999999999999999999999999999999988877643 4567788888887 9999999997778
Q ss_pred HHHHHHHH---hhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHHHH
Q 011394 87 VDETIKTL---SAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (487)
Q Consensus 87 v~~vl~~l---~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (487)
++.++.++ .+.+.++++||++||..+...+++.+.+..++..|+++|+++++..+..|+ .++++|+++.++.++++
T Consensus 100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~l 179 (316)
T 2uyy_A 100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSC 179 (316)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTHHH
T ss_pred HHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHHHH
Confidence 88888654 477889999999999998888888888877899999999999988888888 77788899999999999
Q ss_pred HHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhh
Q 011394 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEIT 242 (487)
Q Consensus 163 l~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~ 242 (487)
|+.+|.+ ++++|+.|.+...|++.|.+....+.++.|++.++++.| ++++++.+++. .+...++.+...
T Consensus 180 l~~~g~~-------~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G-~~~~~~~~~~~---~~~~~s~~~~~~ 248 (316)
T 2uyy_A 180 FQAMGKT-------SFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG-QSQQTLLDILN---QGQLASIFLDQK 248 (316)
T ss_dssp HHHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---HSTTCCHHHHHH
T ss_pred HHHhcCC-------EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---cCCCCCHHHHHh
Confidence 9999976 478888999999999999999999999999999999999 99999988874 344455555443
Q ss_pred ccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHH
Q 011394 243 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARF 296 (487)
Q Consensus 243 ~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~ 296 (487)
.+.+.. +++.+++.++.+.++++ ++++.++++|+|+|+..++ .+.+
T Consensus 249 ~~~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~v-~~~~ 294 (316)
T 2uyy_A 249 CQNILQ-GNFKPDFYLKYIQKDLR------LAIALGDAVNHPTPMAAAA-NEVY 294 (316)
T ss_dssp HHHHHH-TCCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHH
T ss_pred hHHhhc-CCCCCCCcHHHHHHHHH------HHHHHHHHhCCCChHHHHH-HHHH
Confidence 333333 24677888898888865 8899999999999998754 4444
No 26
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.96 E-value=1e-28 Score=256.36 Aligned_cols=254 Identities=17% Similarity=0.178 Sum_probs=198.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh---------------hcCCCCccccCCHHHHHhhcC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK---------------KEGDLPLFGFRDPESFVNSIQ 72 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~---------------~~g~~~~~~~~s~~e~~~~l~ 72 (487)
.+|+|||+|+||.+||.+|+++||+|++||+++++++.+.+... ..+ +++.+++++++++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g--~l~~ttd~~ea~~~-- 84 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAG--RLSFTTDLAEGVKD-- 84 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTT--CEEEESCHHHHHTT--
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccC--CEEEECCHHHHHhc--
Confidence 48999999999999999999999999999999999988865210 011 36778899988887
Q ss_pred CCcEEEEecCCCh----------hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhc
Q 011394 73 KPRVIIMLVKAGA----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGAR 142 (487)
Q Consensus 73 ~advIi~~vp~~~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~ 142 (487)
+|+||+|||++. .++++++++.+.+++|++||++||+.|.+++++.+.+.+.+.. .+.++.++|+.++
T Consensus 85 -aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~-~d~~v~~~Pe~a~ 162 (446)
T 4a7p_A 85 -ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPN-SGAKVVSNPEFLR 162 (446)
T ss_dssp -CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTT-SCCEEEECCCCCC
T ss_pred -CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCC-CCceEEeCccccc
Confidence 999999999875 5899999999999999999999999999999998888775432 3445555555555
Q ss_pred CCC---------ccccCCC-HHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 011394 143 HGP---------SLMPGGS-FEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLK 212 (487)
Q Consensus 143 ~G~---------~i~~gg~-~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~ 212 (487)
.|. .+++|++ +++.+.++++|+.++.+. ..++++++.+.|+.+|+++|.+.+..+++++|+..+++
T Consensus 163 eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~----~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~ 238 (446)
T 4a7p_A 163 EGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQ----SAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLCE 238 (446)
T ss_dssp TTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC---------CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCC----CeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 553 5788885 889999999998876420 01478889999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHH
Q 011394 213 SVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASS 291 (487)
Q Consensus 213 ~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a 291 (487)
+.| +|++++.+++. .+. ++....+.. +++|-..-+.||+. ..+..|.++|+++|++.++
T Consensus 239 ~~G-iD~~~v~~~~~---~~~------rig~~~l~p----g~G~gg~c~~KD~~------~l~~~A~~~g~~~~l~~~~ 297 (446)
T 4a7p_A 239 QVG-ADVQEVSRGIG---MDN------RIGGKFLHA----GPGYGGSCFPKDTL------ALMKTAADNETPLRIVEAT 297 (446)
T ss_dssp HTT-CCHHHHHHHHH---TST------TC---CCCC----CSCCCTTTHHHHHH------HHHHHHHHTTCCCHHHHHH
T ss_pred HcC-CCHHHHHHHHh---cCC------CCCCccCCC----CCCcchhhHHHHHH------HHHHHHHhcCCCCHHHHHH
Confidence 999 99999999973 221 111122222 22333344555553 6788999999999999875
No 27
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.96 E-value=5.9e-28 Score=251.92 Aligned_cols=254 Identities=15% Similarity=0.109 Sum_probs=197.1
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh---------------hcCCCCccccCCHHHHHhhcC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK---------------KEGDLPLFGFRDPESFVNSIQ 72 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~---------------~~g~~~~~~~~s~~e~~~~l~ 72 (487)
|||+|||+|+||.++|.+|+++||+|++||+++++++.+.+... ..+ ++..+++++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~--~l~~t~d~~ea~~~-- 78 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAG--RLRFGTEIEQAVPE-- 78 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTT--SEEEESCHHHHGGG--
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccC--cEEEECCHHHHHhc--
Confidence 79999999999999999999999999999999999988876210 011 35677889988887
Q ss_pred CCcEEEEecCCCh---------hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe---EEecCCCCChhh
Q 011394 73 KPRVIIMLVKAGA---------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL---YLGMGVSGGEEG 140 (487)
Q Consensus 73 ~advIi~~vp~~~---------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~---~i~~pvsgg~~~ 140 (487)
+|+||+|||++. .++++++++.+.+.++++||+.||+.|.+++++.+.+.+.+.. ..+.++.++|+.
T Consensus 79 -aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~ 157 (450)
T 3gg2_A 79 -ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEF 157 (450)
T ss_dssp -CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred -CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhh
Confidence 999999999874 7899999999999999999999999999999888777654211 123344444444
Q ss_pred hcCCC---------ccccCC-CHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 011394 141 ARHGP---------SLMPGG-SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDV 210 (487)
Q Consensus 141 a~~G~---------~i~~gg-~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l 210 (487)
++.|. .+++|| ++++.+.++++|+.++.+ ..++++++.+.++++|+++|.+.+..+++++|+..+
T Consensus 158 a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~-----~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l 232 (450)
T 3gg2_A 158 LKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLN-----NFRVLFMDIASAEMTKYAANAMLATRISFMNDVANL 232 (450)
T ss_dssp CCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCS-----CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcC-----CCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443 477786 589999999999988752 113678889999999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHH
Q 011394 211 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIAS 290 (487)
Q Consensus 211 ~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~ 290 (487)
+++.| +|++++.+++. .+. ++....+..+ ++|-..-+.||+. ..+..|.++|+++|++.+
T Consensus 233 ~~~~G-id~~~v~~~~~---~~~------rig~~~~~pg----~G~gg~c~~KD~~------~l~~~a~~~g~~~~l~~~ 292 (450)
T 3gg2_A 233 CERVG-ADVSMVRLGIG---SDS------RIGSKFLYPG----CGYGGSCFPKDVK------ALIRTAEDNGYRMEVLEA 292 (450)
T ss_dssp HHHHT-CCHHHHHHHHH---TST------TTCSSSCCCS----SCCCSSHHHHHHH------HHHHHHHHTTCCCHHHHH
T ss_pred HHHhC-CCHHHHHHHHc---CCC------CCCcccCCCC----CCCCcccHHhhHH------HHHHHHHHcCCCcHHHHH
Confidence 99999 99999999973 221 1111222222 2233334455553 678999999999999987
Q ss_pred H
Q 011394 291 S 291 (487)
Q Consensus 291 a 291 (487)
+
T Consensus 293 ~ 293 (450)
T 3gg2_A 293 V 293 (450)
T ss_dssp H
T ss_pred H
Confidence 5
No 28
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.96 E-value=1.2e-27 Score=246.42 Aligned_cols=252 Identities=14% Similarity=0.106 Sum_probs=196.3
Q ss_pred CCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-----------hcCCCCccccCCHHHHHhhcCC
Q 011394 5 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-----------KEGDLPLFGFRDPESFVNSIQK 73 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-----------~~g~~~~~~~~s~~e~~~~l~~ 73 (487)
+.+|||+|||+|+||.++|..|++ ||+|++||+++++++.+.+... ..+..+++.+++++++++.
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~--- 109 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRN--- 109 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTT---
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhC---
Confidence 456899999999999999999998 9999999999999988765210 0000146778899888887
Q ss_pred CcEEEEecCCCh----------hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcC
Q 011394 74 PRVIIMLVKAGA----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARH 143 (487)
Q Consensus 74 advIi~~vp~~~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~ 143 (487)
+|+||+|||++. .++.+++++.+ +.+|++||+.||+.|.+++++.+.+.+.++ ..+|+++++..|..
T Consensus 110 aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v--~~sPe~~~~G~A~~ 186 (432)
T 3pid_A 110 ADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV--IFSPEFLREGRALY 186 (432)
T ss_dssp CSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE--EECCCCCCTTSHHH
T ss_pred CCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE--eecCccCCcchhhh
Confidence 999999999872 58888899999 999999999999999999999888766544 45999999887765
Q ss_pred CC----ccccCCCHHHHHHHHHHHHH--HhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 011394 144 GP----SLMPGGSFEAYKYIEDILLK--VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKL 217 (487)
Q Consensus 144 G~----~i~~gg~~~~~~~v~~ll~~--ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i 217 (487)
+. .+++|++++..+++.++|.. ++... .+++++.++|+++|+++|.+.+..+++++|+..+|++.| +
T Consensus 187 ~~l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~~------~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae~~G-i 259 (432)
T 3pid_A 187 DNLHPSRIVIGERSARAERFADLLKEGAIKQDI------PTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAESQG-L 259 (432)
T ss_dssp HHHSCSCEEESSCSHHHHHHHHHHHHHCSSSSC------CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred cccCCceEEecCCHHHHHHHHHHHHhhhccCCC------eEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 42 68999999999999999987 33221 255678999999999999999999999999999999999 9
Q ss_pred CHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHH
Q 011394 218 TNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASS 291 (487)
Q Consensus 218 ~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a 291 (487)
|++++.+++. ... ++....+..+-.|++.++.... +.+ .+...|++.+++.++
T Consensus 260 D~~~v~~~~~---~dp------rig~~~~~pg~G~GG~C~pkD~-----------~~L-~~~~~~~~~~li~~~ 312 (432)
T 3pid_A 260 NSKQIIEGVC---LDP------RIGNHYNNPSFGYGGYCLPKDT-----------KQL-LANYESVPNNIIAAI 312 (432)
T ss_dssp CHHHHHHHHH---TST------TTCSSSCCCCSCCCTTTHHHHH-----------HHH-HHHTTTSCCSHHHHH
T ss_pred CHHHHHHHHc---cCC------CCCcccCCCCCCCcccchhhhH-----------HHH-HHHhcCCchhHHHHH
Confidence 9999999873 111 1112223333346666665543 222 233468998888876
No 29
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.95 E-value=9.2e-28 Score=250.64 Aligned_cols=255 Identities=13% Similarity=0.074 Sum_probs=198.5
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHC-CC-cEEEEeCChH----HHHHHHHhhh-----------------hcCCCCccccC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEK-GF-PISVYNRTTS----KVDETVERAK-----------------KEGDLPLFGFR 62 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~-G~-~V~v~dr~~~----~~~~l~~~~~-----------------~~g~~~~~~~~ 62 (487)
.+|||+|||+|+||.++|.+|+++ || +|++||++++ +++.+.+... ..+ ++..++
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g--~l~~tt 94 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAG--KFECTP 94 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTT--CEEEES
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccC--CeEEeC
Confidence 568999999999999999999999 99 9999999999 8888764210 011 355566
Q ss_pred CHHHHHhhcCCCcEEEEecCCCh-----------hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHH--HcC---
Q 011394 63 DPESFVNSIQKPRVIIMLVKAGA-----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMA--ELG--- 126 (487)
Q Consensus 63 s~~e~~~~l~~advIi~~vp~~~-----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~--~~g--- 126 (487)
+ .+.++. +|+||+|||++. .+..+.+++.+++++|++||+.||+.|.+++++.+.+. ..|
T Consensus 95 d-~ea~~~---aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~ 170 (478)
T 3g79_A 95 D-FSRISE---LDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKA 170 (478)
T ss_dssp C-GGGGGG---CSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCB
T ss_pred c-HHHHhc---CCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCc
Confidence 6 566666 999999999873 25667789999999999999999999999998876443 234
Q ss_pred ---CeEEecCCCCChhhhcCC----CccccCCCHHHHHHHHHHHHHH-hccCCCCCCeEEEeCCchhhHHHHhHHHHHHH
Q 011394 127 ---LLYLGMGVSGGEEGARHG----PSLMPGGSFEAYKYIEDILLKV-AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEY 198 (487)
Q Consensus 127 ---~~~i~~pvsgg~~~a~~G----~~i~~gg~~~~~~~v~~ll~~i-g~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~ 198 (487)
+.++++|.++.+..+..+ +.++.|++++.+++++++|+.+ +.. ++++|+.++|+.+|+++|.+.+
T Consensus 171 ~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~-------~~~~~~~~~aE~~Kl~~N~~~a 243 (478)
T 3g79_A 171 GEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVG-------QVIPMSATAAEVTKTAENTFRD 243 (478)
T ss_dssp TTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSC-------CEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCC-------eEEeCCHHHHHHHHHHHHHHHH
Confidence 478899998877655433 3688899999999999999999 654 4888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHH
Q 011394 199 GDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQA 278 (487)
Q Consensus 199 ~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a 278 (487)
..+++++|+..+|++.| +|++++.+++. .. +.+++....+..+-.|++. -+-||.. ..+..|
T Consensus 244 ~~Ia~~nE~~~l~e~~G-iD~~~v~~~~~---~~----~~~ri~~~~~~PG~G~GG~----c~~KD~~------~l~~~a 305 (478)
T 3g79_A 244 LQIAAINQLALYCEAMG-INVYDVRTGVD---SL----KGEGITRAVLWPGAGVGGH----CLTKDTY------HLERGV 305 (478)
T ss_dssp HHHHHHHHHHHHHHHTT-CCHHHHHHHHH---TS----CCSSSCCCCCCCCSCCCSS----HHHHHHH------HHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-CCHHHHHHHHC---CC----chhhhccccCCCCCCcchh----hHHHHHH------HHHHHH
Confidence 99999999999999999 99999999874 21 1112222233322122333 3444543 678899
Q ss_pred HHcCCC-------chhHHHH
Q 011394 279 ADLSVA-------APTIASS 291 (487)
Q Consensus 279 ~~~gv~-------~P~~~~a 291 (487)
.++|++ .|++.++
T Consensus 306 ~~~g~~~~~~~~~~~li~~~ 325 (478)
T 3g79_A 306 KIGRGELDYPEGADSIYVLA 325 (478)
T ss_dssp TTSSCCCCCCSSCCCHHHHH
T ss_pred HHcCCCcccccchhHHHHHH
Confidence 999987 8888765
No 30
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.94 E-value=2.2e-26 Score=223.92 Aligned_cols=245 Identities=14% Similarity=0.137 Sum_probs=190.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeC--ChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNR--TTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr--~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
|||||||+|.||.+||.+|+++||+|++||| ++++.+++.+.+ +. ++++++++. +|+||+|||+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g-------~~--~~~~~~~~~---aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVG-------VT--ETSEEDVYS---CPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHT-------CE--ECCHHHHHT---SSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCC-------Cc--CCHHHHHhc---CCEEEEECCCHH
Confidence 5899999999999999999999999999999 777777776543 33 677888776 999999999875
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccccCCCHHHHHHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLK 165 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~ 165 (487)
.++. +.++.+.+.+ +|||+|++.|.+++++.+.+.+.| |+++|+++++..+..|..++++|+.+ +.+++ |+.
T Consensus 69 ~~~~-~~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g--~~~~~v~~~~~~~~~g~~~~~~g~~~--~~~~~-l~~ 140 (264)
T 1i36_A 69 ALGA-ARRAGRHVRG--IYVDINNISPETVRMASSLIEKGG--FVDAAIMGSVRRKGADIRIIASGRDA--EEFMK-LNR 140 (264)
T ss_dssp HHHH-HHHHHTTCCS--EEEECSCCCHHHHHHHHHHCSSSE--EEEEEECSCHHHHGGGCEEEEESTTH--HHHHG-GGG
T ss_pred HHHH-HHHHHHhcCc--EEEEccCCCHHHHHHHHHHHhhCC--eeeeeeeCCccccccCCeEEecCCcH--HHhhh-HHH
Confidence 5555 4677777755 999999998888877877776666 89999999998888887777788765 78888 999
Q ss_pred HhccCCCCCCeEEEeCC-chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcc
Q 011394 166 VAAQVPDSGPCVTYVSK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITAD 244 (487)
Q Consensus 166 ig~~~~~~~~~~~~~G~-~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~ 244 (487)
+|.+ ++++++ .|.+..+|+++|.+.+.++.+++|++.++++.| ++++ ..+.+. .+...+++. .. +
T Consensus 141 ~g~~-------~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G-~~~~-~~~~~~---~~~g~~~~~-~~-~ 206 (264)
T 1i36_A 141 YGLN-------IEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLG-LEED-VLEMLE---YTEGNDFRE-SA-I 206 (264)
T ss_dssp GTCE-------EEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHH-HHHHHH---TTSCSSTHH-HH-H
T ss_pred cCCe-------eEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcHH-HHHHHH---HhcCccHHH-HH-H
Confidence 9865 588888 799999999999999999999999999999999 9986 666663 322223332 22 2
Q ss_pred ccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHHhh
Q 011394 245 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLS 298 (487)
Q Consensus 245 ~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~~s 298 (487)
.+..+ ++.+++. ..++++ .+++.++++ +|+|+..++ .+.+..
T Consensus 207 ~~~~~-~~~~g~~---~~~~~~------~~~~~a~~~-v~~p~~~~v-~~~~~~ 248 (264)
T 1i36_A 207 SRLKS-SCIHARR---RYEEMK------EVQDMLAEV-IDPVMPTCI-IRIFDK 248 (264)
T ss_dssp HHHHH-HHHTHHH---HHHHHH------HHHHHHHTT-SCCSHHHHH-HHHHHH
T ss_pred HHhcC-CCCcchh---hHHHHH------HHHHHHHHh-cCchHHHHH-HHHHHH
Confidence 23222 2445544 234443 688999999 999998754 454443
No 31
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.94 E-value=4.6e-26 Score=239.36 Aligned_cols=256 Identities=12% Similarity=0.098 Sum_probs=198.6
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhh------------hhcCCCCccccCCHHHHHhhc
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERA------------KKEGDLPLFGFRDPESFVNSI 71 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~------------~~~g~~~~~~~~s~~e~~~~l 71 (487)
.||||+|||+|.||.++|.+|+++ |++|++||+++++++.+.+.. ......++..+++++++++.
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~- 82 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE- 82 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH-
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc-
Confidence 357999999999999999999999 899999999999988753210 00000035667888888887
Q ss_pred CCCcEEEEecCCChh--------------HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011394 72 QKPRVIIMLVKAGAP--------------VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (487)
Q Consensus 72 ~~advIi~~vp~~~~--------------v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg 137 (487)
+|+||+|||++.. +..+++++.+.+.++++||++||+.|.+++++.+.+.+.+..+++.+|+++
T Consensus 83 --aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~ 160 (467)
T 2q3e_A 83 --ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSN 160 (467)
T ss_dssp --CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred --CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeC
Confidence 9999999998753 567778888989999999999999999998888888776655667788888
Q ss_pred hhhhcCCC-c--------cccCC-----CHHHHHHHHHHHHHH-hccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHH
Q 011394 138 EEGARHGP-S--------LMPGG-----SFEAYKYIEDILLKV-AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQ 202 (487)
Q Consensus 138 ~~~a~~G~-~--------i~~gg-----~~~~~~~v~~ll~~i-g~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~ 202 (487)
++.+..|. . +++|| ++++.+.++++|+.+ +.. ++++++.+.++.+|++.|.+.+..++
T Consensus 161 Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~-------~~~~~~~~~ae~~Kl~~N~~~a~~ia 233 (467)
T 2q3e_A 161 PEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPRE-------KILTTNTWSSELSKLAANAFLAQRIS 233 (467)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGG-------GEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCC-------eEEecCHHHHHHHHHHHHHHHHHHHH
Confidence 88777777 3 67888 778899999999998 544 37888999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcC
Q 011394 203 LIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLS 282 (487)
Q Consensus 203 ~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~g 282 (487)
+++|+..++++.| +|++++.+++..+.. +....+..+-.|++.++ .||+. ..+..|.++|
T Consensus 234 ~~nE~~~l~~~~G-id~~~v~~~~~~~~~---------~~~~~~~pg~g~gg~c~----~kD~~------~l~~~a~~~g 293 (467)
T 2q3e_A 234 SINSISALCEATG-ADVEEVATAIGMDQR---------IGNKFLKASVGFGGSCF----QKDVL------NLVYLCEALN 293 (467)
T ss_dssp HHHHHHHHHHHHT-CCHHHHHHHHHTSTT---------TCSSSCCCCSCCCSSSH----HHHHH------HHHHHHHHTT
T ss_pred HHHHHHHHHHHhC-cCHHHHHHHHcCCCC---------CCccccCCCCCCCCccH----HHHHH------HHHHHHHHcC
Confidence 9999999999999 999999999853211 11112222222444433 34543 6788999999
Q ss_pred CC--chhHHHH
Q 011394 283 VA--APTIASS 291 (487)
Q Consensus 283 v~--~P~~~~a 291 (487)
++ .+++.++
T Consensus 294 ~~~~~~~~~~~ 304 (467)
T 2q3e_A 294 LPEVARYWQQV 304 (467)
T ss_dssp CHHHHHHHHHH
T ss_pred CchHHHHHHHH
Confidence 97 4555544
No 32
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.94 E-value=8.4e-26 Score=232.95 Aligned_cols=202 Identities=12% Similarity=0.151 Sum_probs=169.4
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh---------------cCCCCccccCCHHHHHhhcC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK---------------EGDLPLFGFRDPESFVNSIQ 72 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~---------------~g~~~~~~~~s~~e~~~~l~ 72 (487)
.|..|||+|+||.+||.+|+++||+|++||+++++++.+.+.... .+ ++..+++ ++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g--~l~~ttd-------~~ 82 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSG--KLKVSTT-------PE 82 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEEESS-------CC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccC--ceEEeCc-------hh
Confidence 479999999999999999999999999999999999998753110 00 1222332 23
Q ss_pred CCcEEEEecCCCh-----------hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH-cC------CeEEecCC
Q 011394 73 KPRVIIMLVKAGA-----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE-LG------LLYLGMGV 134 (487)
Q Consensus 73 ~advIi~~vp~~~-----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~-~g------~~~i~~pv 134 (487)
.+|+||+|||++. .+..+.+++.+.+++|++||+.||+.|.+++++.+.+.+ .| +.++++|.
T Consensus 83 ~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe 162 (431)
T 3ojo_A 83 ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPE 162 (431)
T ss_dssp CCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCC
T ss_pred hCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCC
Confidence 4999999999985 267777899999999999999999999999998876544 45 36889998
Q ss_pred CCChhhhcCC---C-ccccCCCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 011394 135 SGGEEGARHG---P-SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDV 210 (487)
Q Consensus 135 sgg~~~a~~G---~-~i~~gg~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l 210 (487)
+..+..+..+ + .++.|+++++.+.++++|+.++.. .+++|+.++|+.+|+++|.+.+..+++++|+..+
T Consensus 163 ~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~-------~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l 235 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQG-------EMIETDARTAEMSKLMENTYRDVNIALANELTKI 235 (431)
T ss_dssp CCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTTTCCS-------CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHHHhCC-------cEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776554332 3 688899999999999999999865 3788999999999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHH
Q 011394 211 LKSVGKLTNEELQNVF 226 (487)
Q Consensus 211 ~~~~g~i~~~~i~~v~ 226 (487)
|++.| +|.+++.+++
T Consensus 236 ~e~~G-iD~~~v~~~~ 250 (431)
T 3ojo_A 236 CNNLN-INVLDVIEMA 250 (431)
T ss_dssp HHHTT-CCHHHHHHHH
T ss_pred HHHcC-CCHHHHHHHH
Confidence 99999 9999999987
No 33
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.93 E-value=9.6e-25 Score=229.33 Aligned_cols=258 Identities=15% Similarity=0.109 Sum_probs=194.9
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh---------------cCCCCccccCCHHHHHhhc
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK---------------EGDLPLFGFRDPESFVNSI 71 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~---------------~g~~~~~~~~s~~e~~~~l 71 (487)
.|||+|||+|+||.++|..|+++||+|++||+++++++.+.+.+.. .+ ++..++++++.++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~--~l~~ttd~~~a~~~- 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAG--RLRFSTDIEAAVAH- 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEEECCHHHHHHH-
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccC--CEEEECCHHHHhhc-
Confidence 4799999999999999999999999999999999999988754200 00 35677888888777
Q ss_pred CCCcEEEEecCCC---------hhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHc---CCeE-EecCCCCCh
Q 011394 72 QKPRVIIMLVKAG---------APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL---GLLY-LGMGVSGGE 138 (487)
Q Consensus 72 ~~advIi~~vp~~---------~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~---g~~~-i~~pvsgg~ 138 (487)
+|+||+|||++ ..++++++++.+.+.++++||+.||+.|.+++++.+.+.+. | .| ++.++.++|
T Consensus 85 --aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g-~~~~~~~v~~~P 161 (478)
T 2y0c_A 85 --GDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKR-GGDQMFSVVSNP 161 (478)
T ss_dssp --CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHT-TCCCCEEEEECC
T ss_pred --CCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCC-CCCccEEEEECh
Confidence 99999999986 68999999999999999999999999999988887766553 3 22 344555566
Q ss_pred hhhcCCC---------ccccCCC-H----HHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHH
Q 011394 139 EGARHGP---------SLMPGGS-F----EAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLI 204 (487)
Q Consensus 139 ~~a~~G~---------~i~~gg~-~----~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~ 204 (487)
+.+..|. .++.|++ + ++.+.++++|+.+..+ ..++++++.+.+.+.|++.|.+....++++
T Consensus 162 e~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~ 236 (478)
T 2y0c_A 162 EFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRN-----HERTLYMDVRSAEFTKYAANAMLATRISFM 236 (478)
T ss_dssp CCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSS-----SCCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhcc-----CCeEEcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555554 4677775 5 7889999999987641 124788889999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCC
Q 011394 205 AEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVA 284 (487)
Q Consensus 205 ~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~ 284 (487)
+|+..++++.| +|.+++.+.+.. . + ++....+..+-.+++.++ .+|.. ..+..|+++|++
T Consensus 237 nE~~~la~~~G-id~~~v~~~i~~---~---~---rig~~~~~pG~g~gg~c~----~kD~~------~l~~~A~~~gv~ 296 (478)
T 2y0c_A 237 NELANLADRFG-ADIEAVRRGIGS---D---P---RIGYHFLYAGCGYGGSCF----PKDVE------ALIRTADEHGQS 296 (478)
T ss_dssp HHHHHHHHHTT-CCHHHHHHHHHT---S---T---TTCSTTCCCSSCCCSSSH----HHHHH------HHHHHHHHTTCC
T ss_pred HHHHHHHHHhC-CCHHHHHHHHhc---C---C---ccCcccCCCCcccccCcC----HHHHH------HHHHHHHHcCCC
Confidence 99999999999 999998887631 0 1 011111121111233332 23332 678899999999
Q ss_pred chhHHHHHHHHH
Q 011394 285 APTIASSLDARF 296 (487)
Q Consensus 285 ~P~~~~a~~~r~ 296 (487)
+|++.++ .+.+
T Consensus 297 ~pl~~~v-~~in 307 (478)
T 2y0c_A 297 LQILKAV-SSVN 307 (478)
T ss_dssp CHHHHHH-HHHH
T ss_pred cHHHHHH-HHHH
Confidence 9998865 4444
No 34
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.93 E-value=3.3e-25 Score=233.38 Aligned_cols=256 Identities=15% Similarity=0.120 Sum_probs=193.3
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhh---cC---------CCCccccCCHHHHHhhc
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKK---EG---------DLPLFGFRDPESFVNSI 71 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~---~g---------~~~~~~~~s~~e~~~~l 71 (487)
+||||+|||+|.||.++|.+|+++ |++|++||+++++++.+.+.... .+ ..++..++++++.++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~- 86 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAE- 86 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhc-
Confidence 357999999999999999999998 79999999999999887642100 00 0024567788787777
Q ss_pred CCCcEEEEecCCCh--------------hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH-cCC------eEE
Q 011394 72 QKPRVIIMLVKAGA--------------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE-LGL------LYL 130 (487)
Q Consensus 72 ~~advIi~~vp~~~--------------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~-~g~------~~i 130 (487)
+|+||+|||++. .++++++++.+++.++++||++||..|.+++++.+.+.+ .++ .+.
T Consensus 87 --aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~ 164 (481)
T 2o3j_A 87 --ADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVL 164 (481)
T ss_dssp --CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEE
T ss_pred --CCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEE
Confidence 999999998864 388888999999999999999999999999888887776 542 234
Q ss_pred ecCCCCChhhhc----CCCccccCCCH-----HHHHHHHHHHHHHhc-cCCCCCCeEEEeCCchhhHHHHhHHHHHHHHH
Q 011394 131 GMGVSGGEEGAR----HGPSLMPGGSF-----EAYKYIEDILLKVAA-QVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGD 200 (487)
Q Consensus 131 ~~pvsgg~~~a~----~G~~i~~gg~~-----~~~~~v~~ll~~ig~-~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~ 200 (487)
..|.+..+..+. ..+.+++|++. ++++.++++|+.++. . ++++++.+.++++|++.|.+....
T Consensus 165 ~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~-------~~~~~d~~~ae~~Kl~~N~~~a~~ 237 (481)
T 2o3j_A 165 SNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRN-------RIITTNTWSSELSKLVANAFLAQR 237 (481)
T ss_dssp ECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGG-------GEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred eCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCC-------eEEecCHHHHHHHHHHHHHHHHHH
Confidence 556555443332 22257777754 578899999999984 4 377888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHH
Q 011394 201 MQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAAD 280 (487)
Q Consensus 201 ~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~ 280 (487)
+++++|+..++++.| +|++++.+++. .+. ++....+..+..|++.+ +.||+. ..+..|.+
T Consensus 238 ia~~nE~~~la~~~G-id~~~v~~~~~---~~~------ri~~~~~~pg~g~gg~c----~~KD~~------~l~~~A~~ 297 (481)
T 2o3j_A 238 ISSINSISAVCEATG-AEISEVAHAVG---YDT------RIGSKFLQASVGFGGSC----FQKDVL------SLVYLCES 297 (481)
T ss_dssp HHHHHHHHHHHHHHS-CCHHHHHHHHH---TST------TTCSSSCCCCSCCCSSS----HHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-cCHHHHHHHHc---cCC------CCCCCCCCCCCccCCcc----HHHHHH------HHHHHHHH
Confidence 999999999999999 99999999873 221 11112222222233333 345543 67889999
Q ss_pred cCCC--chhHHHH
Q 011394 281 LSVA--APTIASS 291 (487)
Q Consensus 281 ~gv~--~P~~~~a 291 (487)
+|+| +|++.++
T Consensus 298 ~g~~~~~~l~~~~ 310 (481)
T 2o3j_A 298 LNLPQVADYWQGV 310 (481)
T ss_dssp TTCHHHHHHHHHH
T ss_pred cCCCccchHHHHH
Confidence 9999 8988765
No 35
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.92 E-value=1.8e-24 Score=225.50 Aligned_cols=253 Identities=16% Similarity=0.174 Sum_probs=188.9
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh---------------cCCCCccccCCHHHHHhhcC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK---------------EGDLPLFGFRDPESFVNSIQ 72 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~---------------~g~~~~~~~~s~~e~~~~l~ 72 (487)
|||+|||+|+||.++|..|+++||+|++||+++++++.+.+.+.. .+ ++..+++++++++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g--~l~~t~~~~~~~~~-- 76 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTG--RLSGTTDFKKAVLD-- 76 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEEESCHHHHHHT--
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccC--ceEEeCCHHHHhcc--
Confidence 589999999999999999999999999999999999887652100 11 25667888887776
Q ss_pred CCcEEEEecCCChh---------HHHHHHHHhhcccC---CCEEEecCCCCchh-HHHHHHHHHHc-CCeE-EecCCCCC
Q 011394 73 KPRVIIMLVKAGAP---------VDETIKTLSAYMEK---GDCIIDGGNEWYEN-TERREKAMAEL-GLLY-LGMGVSGG 137 (487)
Q Consensus 73 ~advIi~~vp~~~~---------v~~vl~~l~~~l~~---g~iiId~st~~~~~-~~~~~~~l~~~-g~~~-i~~pvsgg 137 (487)
+|+||+|||++.. ++++++++.+.+.+ +++||+.||..|.+ .+.+.+.+.+. |..+ ++.+++++
T Consensus 77 -aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~ 155 (436)
T 1mv8_A 77 -SDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTN 155 (436)
T ss_dssp -CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEEC
T ss_pred -CCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEEC
Confidence 9999999998865 89999999999988 99999999999888 55566666554 5443 33444444
Q ss_pred hhhhcCCC---------ccccCCC-HHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHH
Q 011394 138 EEGARHGP---------SLMPGGS-FEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEA 207 (487)
Q Consensus 138 ~~~a~~G~---------~i~~gg~-~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea 207 (487)
|+.+..|. .++.|++ +++.+.++++|+.++.+ +++++.+.++++|++.|.+....+++++|+
T Consensus 156 Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~--------v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 156 PEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAP--------IIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSC--------EEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCC--------EEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444443 4667775 88899999999998753 334778999999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchh
Q 011394 208 YDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPT 287 (487)
Q Consensus 208 ~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~ 287 (487)
..++++.| +|.+++.+++. ... .+. .....+..+..|++.++ .+|.. ..+..|+++|+++|+
T Consensus 228 ~~l~~~~G-id~~~v~~~~~---~~~--r~~--~~~~~~~pg~g~gg~~~----~kD~~------~l~~~a~~~g~~~pl 289 (436)
T 1mv8_A 228 GNIAKAVG-VDGREVMDVIC---QDH--KLN--LSRYYMRPGFAFGGSCL----PKDVR------ALTYRASQLDVEHPM 289 (436)
T ss_dssp HHHHHHTT-SCHHHHHHHHT---TCT--TTT--TSSTTCSCCSCCCSSSH----HHHHH------HHHHHHHHTTCCCTT
T ss_pred HHHHHHhC-CCHHHHHHHhc---CCC--CCC--CcccCCCCcccccCcCc----HhhHH------HHHHHHHHcCCCcHH
Confidence 99999999 99999888863 111 000 00111222112333333 23332 677899999999999
Q ss_pred HHHH
Q 011394 288 IASS 291 (487)
Q Consensus 288 ~~~a 291 (487)
+.++
T Consensus 290 ~~~v 293 (436)
T 1mv8_A 290 LGSL 293 (436)
T ss_dssp GGGH
T ss_pred HHHH
Confidence 8875
No 36
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.91 E-value=4.7e-23 Score=212.40 Aligned_cols=251 Identities=12% Similarity=0.049 Sum_probs=183.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc-----------CCCCccccCCHHHHHhhcCCCcE
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE-----------GDLPLFGFRDPESFVNSIQKPRV 76 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~-----------g~~~~~~~~s~~e~~~~l~~adv 76 (487)
|||+|||+|.||.++|.+|++ ||+|++|||++++++.+.+.+... ...++..++++++.++. +|+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~---aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKE---AEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHH---CSE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcC---CCE
Confidence 589999999999999999999 999999999999998876543200 00023556778777777 999
Q ss_pred EEEecCCCh----------hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcC---
Q 011394 77 IIMLVKAGA----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARH--- 143 (487)
Q Consensus 77 Ii~~vp~~~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~--- 143 (487)
||+|||++. .++++++++.+ +.++++||+.||..|..++++.+.+.+. .++.+|.+..+..+..
T Consensus 77 viiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~G~a~~~~~ 153 (402)
T 1dlj_A 77 VIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRESKALYDNL 153 (402)
T ss_dssp EEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCTTSTTHHHH
T ss_pred EEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccCcchhhccc
Confidence 999999874 58999999999 8999999999999999988887766443 5677887776554432
Q ss_pred CC-ccccCCCH-------HHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhC
Q 011394 144 GP-SLMPGGSF-------EAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVG 215 (487)
Q Consensus 144 G~-~i~~gg~~-------~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g 215 (487)
.+ .+++|++. +..+.+.++|..-+.+ ...++++++.+.++++|++.|.+.+..+++++|+..++++.|
T Consensus 154 ~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~G 229 (402)
T 1dlj_A 154 YPSRIIVSCEENDSPKVKADAEKFALLLKSAAKK----NNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRK 229 (402)
T ss_dssp SCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSC----SCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcccchhHHHHHHHHHHHhhhhcc----CCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 23 57888876 5556666666542211 011367788999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHH
Q 011394 216 KLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASS 291 (487)
Q Consensus 216 ~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a 291 (487)
+|.+++.+++. .+. ++....+..+-.|++. -+.||.. ..+..| .|+++|++.++
T Consensus 230 -id~~~v~~~~~---~~~------ri~~~~~~pg~g~gg~----c~~kD~~------~l~~~a--~~~~~~l~~~~ 283 (402)
T 1dlj_A 230 -LNSHMIIQGIS---YDD------RIGMHYNNPSFGYGGY----SLPKDTK------QLLANY--NNIPQTLIEAI 283 (402)
T ss_dssp -CCHHHHHHHHH---TST------TTCSSSCCCCSSCCSS----HHHHHHH------HHHHHH--TTSSCSHHHHH
T ss_pred -CCHHHHHHHhc---cCC------CCCcCCCCCCCccCCc----cHHhhHH------HHHHHh--cCCChHHHHHH
Confidence 99999998873 221 1111122221123333 4444542 344555 38999998875
No 37
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.91 E-value=1.5e-23 Score=212.30 Aligned_cols=286 Identities=15% Similarity=0.136 Sum_probs=199.9
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcC---CC----CccccCCHHHHHhhcCCCcEEEE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEG---DL----PLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g---~~----~~~~~~s~~e~~~~l~~advIi~ 79 (487)
+|||+|||+|.||.++|..|+++|++|++|||++++++.+.+.+.... +. ++..+++++++++. +|+||+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~---aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEG---VTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTT---CCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhc---CCEEEE
Confidence 479999999999999999999999999999999999998887643210 00 24567788888876 999999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHH----HHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCCCHH
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTE----RREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFE 154 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~----~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~ 154 (487)
+||+. .++++++++.+.+.++++||+++++....+. .+.+.+....+.++..|.+..+..+...+ .++.+.+++
T Consensus 106 aVp~~-~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via~~~~~ 184 (356)
T 3k96_A 106 VVPSF-AFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQ 184 (356)
T ss_dssp CCCHH-HHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEEESCHH
T ss_pred CCCHH-HHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEecCCHH
Confidence 99975 8999999999999999999999987665432 22233322345677888776654433333 345567899
Q ss_pred HHHHHHHHHHHHhccCCCCCCeEEEeCC-----------------chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 011394 155 AYKYIEDILLKVAAQVPDSGPCVTYVSK-----------------GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKL 217 (487)
Q Consensus 155 ~~~~v~~ll~~ig~~~~~~~~~~~~~G~-----------------~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i 217 (487)
..+.++++|+..+.+ ++...+ .|.+..+|+.+|.....+...++|+..++++.| .
T Consensus 185 ~~~~v~~lf~~~~~r-------v~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G-~ 256 (356)
T 3k96_A 185 FSKDLIERLHGQRFR-------VYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFG-G 256 (356)
T ss_dssp HHHHHHHHHCCSSEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred HHHHHHHHhCCCCee-------EEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhC-C
Confidence 999999999876654 233232 256666789999999999999999999999999 9
Q ss_pred CHHHHHHHHHhhccCcchhhhHhhhcccccc---ccCCCCchhHHhhhhccCCCCchHHHH----HHHHHcCCCchhHHH
Q 011394 218 TNEELQNVFTEWNKGELLSFLIEITADIFGI---KDDKGDGYLVDKVLDKTGMKGTGKWTV----QQAADLSVAAPTIAS 290 (487)
Q Consensus 218 ~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~---~~~~~~~~~l~~i~~~~~~kgtg~~~~----~~a~~~gv~~P~~~~ 290 (487)
+++++..+ .|.++ .++.-+++.-+. +..+..+..++.+.+..++..+|..++ +.|+++|+++|++.+
T Consensus 257 ~~~t~~gl-----~g~gD-l~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~~ 330 (356)
T 3k96_A 257 KQETLTGL-----AGLGD-LVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQ 330 (356)
T ss_dssp CHHHHTST-----TTHHH-HHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred ChHhhccc-----chhhH-HHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCCcHHHH
Confidence 99987642 11111 111111110000 000111234566666677888885544 678899999999875
Q ss_pred HHHHHHhhccchHHHHHHHhhc
Q 011394 291 SLDARFLSGLKEERVEAAKVFK 312 (487)
Q Consensus 291 a~~~r~~s~~~~~r~~~~~~~~ 312 (487)
|+ +.+...++.+..+..++.
T Consensus 331 -v~-~il~~~~~~~~~~~~l~~ 350 (356)
T 3k96_A 331 -VH-RILHEDLDPQQAVQELLE 350 (356)
T ss_dssp -HH-HHHHSCCCHHHHHHHHHS
T ss_pred -HH-HHHhCCCCHHHHHHHHHc
Confidence 44 455555666777766654
No 38
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.90 E-value=1.1e-22 Score=209.48 Aligned_cols=255 Identities=16% Similarity=0.115 Sum_probs=186.4
Q ss_pred CCCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh---------------hhhcCCCCccccCCHHHHH
Q 011394 4 GKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER---------------AKKEGDLPLFGFRDPESFV 68 (487)
Q Consensus 4 ~~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~---------------~~~~g~~~~~~~~s~~e~~ 68 (487)
++.|.+|+|||+|+||.++|..|+++||+|+++|.++++++.+.+. ....+ ++..++++++.+
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g--~l~~tt~~~~ai 95 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSG--RLSFAESAEEAV 95 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEECSSHHHHH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcC--CeeEEcCHHHHH
Confidence 4567899999999999999999999999999999999998877531 11111 466788888888
Q ss_pred hhcCCCcEEEEecCCC---------hhHHHHHHHHhhccc---CCCEEEecCCCCchhHHHHHHHHH-Hc----CCeEEe
Q 011394 69 NSIQKPRVIIMLVKAG---------APVDETIKTLSAYME---KGDCIIDGGNEWYENTERREKAMA-EL----GLLYLG 131 (487)
Q Consensus 69 ~~l~~advIi~~vp~~---------~~v~~vl~~l~~~l~---~g~iiId~st~~~~~~~~~~~~l~-~~----g~~~i~ 131 (487)
+. +|++|+|||++ ..++.+.+.+.++++ +|++||..||+.|.+++++...+. +. .+....
T Consensus 96 ~~---ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~ 172 (444)
T 3vtf_A 96 AA---TDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVAS 172 (444)
T ss_dssp HT---SSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEE
T ss_pred hc---CCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeec
Confidence 87 99999999876 246777788877774 689999999999999988765443 32 233445
Q ss_pred cCCCCChhhhc----CCCccccCC-CHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHH
Q 011394 132 MGVSGGEEGAR----HGPSLMPGG-SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAE 206 (487)
Q Consensus 132 ~pvsgg~~~a~----~G~~i~~gg-~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~E 206 (487)
+|-+-.+..+. +.+.++.|+ ++.+.+.+.++++.+... ++ +.....++++|++.|.+.+..+++++|
T Consensus 173 ~PErl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~-------~~-~~~~~~AE~~Kl~eN~~ravnIa~~NE 244 (444)
T 3vtf_A 173 NPEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAP-------KL-VMKPREAELVKYASNVFLALKISFANE 244 (444)
T ss_dssp CCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSC-------EE-EECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCC-------EE-EechhHHHHHHHHHHHHHHHHHHHHHH
Confidence 56443322221 222455554 677778888888766532 33 345689999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCch
Q 011394 207 AYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAP 286 (487)
Q Consensus 207 a~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P 286 (487)
...+|++.| +|..++.+.+.. .. ++....+..+-.|++.++..... ..+..|.++|++.+
T Consensus 245 la~ice~~G-iDv~eV~~a~~~--d~-------rig~~~l~PG~G~GG~CipkD~~----------~L~~~a~~~g~~~~ 304 (444)
T 3vtf_A 245 VGLLAKRLG-VDTYRVFEAVGL--DK-------RIGRHYFGAGLGFGGSCFPKDTL----------AFIRFGESLGLEMA 304 (444)
T ss_dssp HHHHHHHTT-CCHHHHHHHHHT--ST-------TSCSTTCCCSSCCCTTTHHHHHH----------HHHHHHHHTTCCCH
T ss_pred HHHHHHHcC-CCHHHHHHHhcc--CC-------CCCCCCCCCCCCCCCcccCcCHH----------HHHHHHHhcCCCHH
Confidence 999999999 999999988731 01 11112344444467776654331 45678999999999
Q ss_pred hHHHH
Q 011394 287 TIASS 291 (487)
Q Consensus 287 ~~~~a 291 (487)
++.++
T Consensus 305 li~a~ 309 (444)
T 3vtf_A 305 ISKAV 309 (444)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88765
No 39
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.90 E-value=7.6e-24 Score=203.96 Aligned_cols=179 Identities=13% Similarity=0.114 Sum_probs=143.6
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHH--------------HHHHHHhhhhcCCCCccccCCHHHHHhhc
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSK--------------VDETVERAKKEGDLPLFGFRDPESFVNSI 71 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~--------------~~~l~~~~~~~g~~~~~~~~s~~e~~~~l 71 (487)
..+||||||+|.||.+||.+|+++||+|++|||++++ .+++.+.. +...+.+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~e~~~~- 90 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH------PHVHLAAFADVAAG- 90 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGS------TTCEEEEHHHHHHH-
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc------CceeccCHHHHHhc-
Confidence 3579999999999999999999999999999999987 44443321 12346788888887
Q ss_pred CCCcEEEEecCCChhHHHHHHHH-hhcccCCCEEEecCC-----------CCchhHHHHHHHHHH--------cCCeEEe
Q 011394 72 QKPRVIIMLVKAGAPVDETIKTL-SAYMEKGDCIIDGGN-----------EWYENTERREKAMAE--------LGLLYLG 131 (487)
Q Consensus 72 ~~advIi~~vp~~~~v~~vl~~l-~~~l~~g~iiId~st-----------~~~~~~~~~~~~l~~--------~g~~~i~ 131 (487)
+|+||+|||+. .+.+++.++ .+.+ ++++|||+++ ..|.+.....+.+++ +++.+++
T Consensus 91 --aDvVilavp~~-~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~ 166 (245)
T 3dtt_A 91 --AELVVNATEGA-SSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMN 166 (245)
T ss_dssp --CSEEEECSCGG-GHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSC
T ss_pred --CCEEEEccCcH-HHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccC
Confidence 99999999986 566777777 6777 8999999994 344444444444544 3788999
Q ss_pred cCCCCChhhhcCCC-ccccCC-CHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHH
Q 011394 132 MGVSGGEEGARHGP-SLMPGG-SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDM 201 (487)
Q Consensus 132 ~pvsgg~~~a~~G~-~i~~gg-~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~ 201 (487)
+|+++++..+..|+ +++++| ++++++.++++|+.+|... ++++|+.|+|+.+|+++|.+.....
T Consensus 167 a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~------~~~~G~~g~a~~~k~~~~~~~~l~~ 232 (245)
T 3dtt_A 167 ASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQD------VIDLGDITTARGAEMLLPVWIRLWG 232 (245)
T ss_dssp HHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCC------EEEEESGGGHHHHHTTHHHHHHHHH
T ss_pred HHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCc------eeccCcHHHHHHhhhhHHHHHHHHH
Confidence 99999999888888 677655 6899999999999999642 6899999999999999999776653
No 40
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.87 E-value=3.9e-22 Score=198.29 Aligned_cols=265 Identities=17% Similarity=0.163 Sum_probs=175.9
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCC------CCccccCCHHHHHhhcCCCcEEEE
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGD------LPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~------~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
+||||+|||+|.||..+|..|+++|++|++|||++++.+.+.+.+..... .++. ..+.+++.+.++.+|+||+
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLP-IFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCC-EECGGGCCTTSCCCSEEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecce-eecchhhcccCCCCCEEEE
Confidence 36799999999999999999999999999999999999888765421000 0011 1134455442335999999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHc----CCeEEecCCCCC--hhhhcCCC-ccc--cC
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL----GLLYLGMGVSGG--EEGARHGP-SLM--PG 150 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~i~~pvsgg--~~~a~~G~-~i~--~g 150 (487)
|+|+. +++++++++.+.+.++++||+++++.. ..+.+.+.+.+. |..++++++++. ......|. .+. .+
T Consensus 81 ~v~~~-~~~~v~~~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~ 158 (316)
T 2ew2_A 81 LTKAQ-QLDAMFKAIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDP 158 (316)
T ss_dssp CSCHH-HHHHHHHHHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESSG
T ss_pred Eeccc-cHHHHHHHHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCC
Confidence 99975 789999999999999999999988764 333444444332 223334444432 11223455 343 35
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHH---------------------HHHHHHHHHHHH
Q 011394 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIE---------------------YGDMQLIAEAYD 209 (487)
Q Consensus 151 g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~---------------------~~~~~~~~Ea~~ 209 (487)
++++..+.++++|+.++.+ +.+.++.+.+.+.|++.|.+. ..+.+++.|+..
T Consensus 159 ~~~~~~~~~~~ll~~~g~~-------~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~ 231 (316)
T 2ew2_A 159 SGKKFALEVVDVFQKAGLN-------PSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAA 231 (316)
T ss_dssp GGHHHHHHHHHHHHHTTCC-------EEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHhCCCC-------cEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHH
Confidence 6788899999999999864 467788899999999999642 557789999999
Q ss_pred HHHHhCCCCH--HHHHHHHHhhccCc--chhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCc
Q 011394 210 VLKSVGKLTN--EELQNVFTEWNKGE--LLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAA 285 (487)
Q Consensus 210 l~~~~g~i~~--~~i~~v~~~~~~~~--~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~ 285 (487)
++++.| +++ +.+.+.+..+.... ..++ .++..+++ ..++..+ +.++. | ..++.|+++|+|+
T Consensus 232 la~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~-~sm~~d~~------~~g~~~E-~~~~~-----~-~~~~~a~~~gv~~ 296 (316)
T 2ew2_A 232 VAEKEA-IYLDQAEVYTHIVQTYDPNGIGLHY-PSMYQDLI------KNHRLTE-IDYIN-----G-AVWRKGQKYNVAT 296 (316)
T ss_dssp HHHHTT-CCCCHHHHHHHHHHTTCTTTTTTSC-CHHHHHHT------TTCCCCS-GGGTH-----H-HHHHHHHHHTCCC
T ss_pred HHHHcC-CCCChHHHHHHHHHHhccccCCCCC-cHHHHHHH------HcCCcch-HHHHh-----h-HHHHHHHHhCCCC
Confidence 999999 986 45666664322111 1110 00111120 1112222 33333 3 7889999999999
Q ss_pred hhHHHHHHHHH
Q 011394 286 PTIASSLDARF 296 (487)
Q Consensus 286 P~~~~a~~~r~ 296 (487)
|+.... ...+
T Consensus 297 P~~~~~-~~~~ 306 (316)
T 2ew2_A 297 PFCAML-TQLV 306 (316)
T ss_dssp HHHHHH-HHHH
T ss_pred CHHHHH-HHHH
Confidence 998753 4444
No 41
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.85 E-value=7.7e-21 Score=189.38 Aligned_cols=196 Identities=14% Similarity=0.185 Sum_probs=145.3
Q ss_pred CCCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-------hcC---C--------CCccccCCHH
Q 011394 4 GKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------KEG---D--------LPLFGFRDPE 65 (487)
Q Consensus 4 ~~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------~~g---~--------~~~~~~~s~~ 65 (487)
...++||||||+|.||.+||.+|+++||+|++||+++++++++.+... ..| + .+++.+++++
T Consensus 3 ~~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ 82 (319)
T 2dpo_A 3 SPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred CCCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHH
Confidence 345689999999999999999999999999999999998887754210 000 0 0246778898
Q ss_pred HHHhhcCCCcEEEEecCCChhH-HHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCChhh
Q 011394 66 SFVNSIQKPRVIIMLVKAGAPV-DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEG 140 (487)
Q Consensus 66 e~~~~l~~advIi~~vp~~~~v-~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pvsgg~~~ 140 (487)
+++++ +|+||+|||+..++ +.++.++.+.++++.+|++.+++.+.. ++.+.+.. .|.||++.|-
T Consensus 83 eav~~---aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~--~la~~~~~~~r~ig~Hp~~P~~------ 151 (319)
T 2dpo_A 83 EAVEG---VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS--KLFTGLAHVKQCIVAHPVNPPY------ 151 (319)
T ss_dssp HHTTT---EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH--HHHTTCTTGGGEEEEEECSSTT------
T ss_pred HHHhc---CCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHH--HHHHhcCCCCCeEEeecCCchh------
Confidence 88877 99999999987555 456688999999999998776665432 34433321 2556665431
Q ss_pred hcCCC--ccccC--CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC
Q 011394 141 ARHGP--SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGK 216 (487)
Q Consensus 141 a~~G~--~i~~g--g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~ 216 (487)
.++ .+++| +++++++.++++++.+|++ ++++++.+.|+ ++||. . .++++|++.++++.+
T Consensus 152 --~~~lveiv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~~~~~Gf---i~Nrl-l---~a~~~EA~~l~~~g~- 214 (319)
T 2dpo_A 152 --YIPLVELVPHPETSPATVDRTHALMRKIGQS-------PVRVLKEIDGF---VLNRL-Q---YAIISEAWRLVEEGI- 214 (319)
T ss_dssp --TCCEEEEEECTTCCHHHHHHHHHHHHHTTCE-------EEECSSCCTTT---THHHH-H---HHHHHHHHHHHHTTS-
T ss_pred --hcceEEEeCCCCCCHHHHHHHHHHHHHcCCE-------EEEECCCcCCc---hHHHH-H---HHHHHHHHHHHHhCC-
Confidence 123 46676 7999999999999999976 48888878886 34444 3 346899999999887
Q ss_pred CCHHHHHHHHH
Q 011394 217 LTNEELQNVFT 227 (487)
Q Consensus 217 i~~~~i~~v~~ 227 (487)
+|++++.+++.
T Consensus 215 ~~~~~id~a~~ 225 (319)
T 2dpo_A 215 VSPSDLDLVMS 225 (319)
T ss_dssp SCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999999973
No 42
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.85 E-value=4.8e-21 Score=188.18 Aligned_cols=187 Identities=12% Similarity=0.192 Sum_probs=139.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|||||+|.||.+||.+|+ +||+|++||+++++++++.+......--+++.++++++ +++ ||+||.|||++.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~---aDlVieavpe~~~ 86 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKD---CDIVMEAVFEDLN 86 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGG---CSEEEECCCSCHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcC---CCEEEEcCcCCHH
Confidence 368999999999999999999 99999999999999988876510000002566778876 565 9999999999988
Q ss_pred HHHHH-HHHhhcccCCCEEE-ecCCCCchhHHHHHH-HHHHcCCeEEecCCCCChhhhcCCC--ccccC--CCHHHHHHH
Q 011394 87 VDETI-KTLSAYMEKGDCII-DGGNEWYENTERREK-AMAELGLLYLGMGVSGGEEGARHGP--SLMPG--GSFEAYKYI 159 (487)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiI-d~st~~~~~~~~~~~-~l~~~g~~~i~~pvsgg~~~a~~G~--~i~~g--g~~~~~~~v 159 (487)
++.++ .++.+ + ++.+++ |+||..+....+... ..+..|.||++ |+.+ ++ .++.| +++++++++
T Consensus 87 vk~~l~~~l~~-~-~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~-Pv~~-------~~lveiv~g~~t~~~~~~~~ 156 (293)
T 1zej_A 87 TKVEVLREVER-L-TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMN-PPHV-------MPLVEIVISRFTDSKTVAFV 156 (293)
T ss_dssp HHHHHHHHHHT-T-CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECS-STTT-------CCEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHhc-C-CCCEEEEECCCcCHHHHHHHhhcccceEeEEecC-cccc-------CCEEEEECCCCCCHHHHHHH
Confidence 88776 45544 4 888885 677776653322111 11234788888 6543 34 45666 499999999
Q ss_pred HHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011394 160 EDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFT 227 (487)
Q Consensus 160 ~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~ 227 (487)
.++++.+|++ ++++|+. |++||.+ ...++|++.++++ | ++++++.+++.
T Consensus 157 ~~l~~~lGk~-------~v~v~d~------fi~Nrll----~~~~~EA~~l~~~-G-v~~e~id~~~~ 205 (293)
T 1zej_A 157 EGFLRELGKE-------VVVCKGQ------SLVNRFN----AAVLSEASRMIEE-G-VRAEDVDRVWK 205 (293)
T ss_dssp HHHHHHTTCE-------EEEEESS------CHHHHHH----HHHHHHHHHHHHH-T-CCHHHHHHHHH
T ss_pred HHHHHHcCCe-------EEEeccc------ccHHHHH----HHHHHHHHHHHHh-C-CCHHHHHHHHH
Confidence 9999999976 4888864 5555553 3578999999998 8 89999999973
No 43
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.84 E-value=1.7e-21 Score=198.43 Aligned_cols=274 Identities=14% Similarity=0.074 Sum_probs=176.7
Q ss_pred cEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcC---C----CCccccCCHHHHHhhcCCCcEEEEec
Q 011394 9 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEG---D----LPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 9 kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g---~----~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
||+|||+|.||.++|.+|+++||+|++|||++++++.+.+.+.... + .++..+++++++++. +|+||+||
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---aDvVilav 93 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG---AEIILFVI 93 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT---CSSEEECC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcC---CCEEEECC
Confidence 8999999999999999999999999999999999988876542100 0 024556788888776 99999999
Q ss_pred CCChhHHHHHHH----HhhcccC-CCEEEecCCCCch-hHHHHHHHHHHc-C---CeEEecCCCCChhhhcCCC---ccc
Q 011394 82 KAGAPVDETIKT----LSAYMEK-GDCIIDGGNEWYE-NTERREKAMAEL-G---LLYLGMGVSGGEEGARHGP---SLM 148 (487)
Q Consensus 82 p~~~~v~~vl~~----l~~~l~~-g~iiId~st~~~~-~~~~~~~~l~~~-g---~~~i~~pvsgg~~~a~~G~---~i~ 148 (487)
|+ .++++++.+ +.+.+.+ +++||+++++... ..+.+.+.+.+. + ..++.+|...... ..|. .++
T Consensus 94 ~~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~--~~g~~~~~~~ 170 (366)
T 1evy_A 94 PT-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV--ATGVFTCVSI 170 (366)
T ss_dssp CH-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHH--HTTCCEEEEE
T ss_pred Ch-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHH--HhCCceEEEE
Confidence 97 588999988 8888888 9999999965433 233334444332 3 2334444332211 2343 344
Q ss_pred cCCCHHHHHHHHHHHHHH--hccCCCCCCeEEEeCCch-----------------hhHHHHhHHHHHHHHHHHHHHHHHH
Q 011394 149 PGGSFEAYKYIEDILLKV--AAQVPDSGPCVTYVSKGG-----------------SGNFVKMIHNGIEYGDMQLIAEAYD 209 (487)
Q Consensus 149 ~gg~~~~~~~v~~ll~~i--g~~~~~~~~~~~~~G~~G-----------------~g~~~K~v~N~~~~~~~~~~~Ea~~ 209 (487)
.+++++.++.++++|+.. +.+ +++.++.- ....+|+.+|.+......++.|+..
T Consensus 171 ~~~~~~~~~~v~~ll~~~g~g~~-------~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~ 243 (366)
T 1evy_A 171 ASADINVARRLQRIMSTGDRSFV-------CWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRD 243 (366)
T ss_dssp ECSSHHHHHHHHHHHSCTTSSEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHhcCCCCeEE-------EEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHH
Confidence 566888899999999988 644 34444421 2222355578888889999999999
Q ss_pred HHHHhCCCCHHHHHHHH---HhhccCcchhhhHhhh--ccccccccCCCCchhHHhh----------hhccCCCCchHHH
Q 011394 210 VLKSVGKLTNEELQNVF---TEWNKGELLSFLIEIT--ADIFGIKDDKGDGYLVDKV----------LDKTGMKGTGKWT 274 (487)
Q Consensus 210 l~~~~g~i~~~~i~~v~---~~~~~~~~~s~~~~~~--~~~l~~~~~~~~~~~l~~i----------~~~~~~kgtg~~~ 274 (487)
++++.| ++++++.++. ..|.. ..+...+.. ...+..+ +.++.+ .++++ .+
T Consensus 244 la~a~G-i~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~e~~~~~~------~v 308 (366)
T 1evy_A 244 LTAALG-GDGSAVFGLAGLGDLQLT--CSSELSRNFTVGKKLGKG------LPIEEIQRTSKAVAEGVATAD------PL 308 (366)
T ss_dssp HHHHTT-CCCTTTTSTTTHHHHHHH--HTCTTSHHHHHHHHHHTT------CCHHHHHC---CCCHHHHHHH------HH
T ss_pred HHHHhC-CCCccccccccchhheee--ecCCCCchHHHHHHHhCC------CCHHHHHHHcCCeeehHHHHH------HH
Confidence 999999 9976553320 00000 001111110 0111111 112211 23332 68
Q ss_pred HHHHHHcCCCchhHHHHHHHHHhhccchHHHHHHHhhc
Q 011394 275 VQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFK 312 (487)
Q Consensus 275 ~~~a~~~gv~~P~~~~a~~~r~~s~~~~~r~~~~~~~~ 312 (487)
++.|+++|+|+|+.... + +++...++.+..+..++.
T Consensus 309 ~~~a~~~gv~~P~~~~v-~-~~~~~~~~~~~~~~~l~~ 344 (366)
T 1evy_A 309 MRLAKQLKVKMPLCHQI-Y-EIVYKKKNPRDALADLLS 344 (366)
T ss_dssp HHHHHHHTCCCHHHHHH-H-HHHHSCCCHHHHHHHHGG
T ss_pred HHHHHHhCCCCcHHHHH-H-HHHHCCCCHHHHHHHHHc
Confidence 89999999999998753 4 444455666666666654
No 44
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.84 E-value=4.6e-20 Score=178.72 Aligned_cols=227 Identities=14% Similarity=0.099 Sum_probs=160.2
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
+||||+|||+|.||..++.+|.+.|++|.+|||++++.+.+.+.. ++..+.+++++++. +|+||+|+|+ .
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~---~D~Vi~~v~~-~ 71 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------ALPYAMSHQDLIDQ---VDLVILGIKP-Q 71 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------TCCBCSSHHHHHHT---CSEEEECSCG-G
T ss_pred CccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc------CCEeeCCHHHHHhc---CCEEEEEeCc-H
Confidence 568999999999999999999999999999999999998887643 14567789888876 9999999994 5
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCC--CHHHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGG--SFEAYKYIEDI 162 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg--~~~~~~~v~~l 162 (487)
.+.+++.+ +.++++||+.+++.+.. .+.+.+ ..+.+++. ++.+.+.....|. .+++|+ +++.++.++++
T Consensus 72 ~~~~v~~~----l~~~~~vv~~~~~~~~~--~l~~~~-~~~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l 143 (259)
T 2ahr_A 72 LFETVLKP----LHFKQPIISMAAGISLQ--RLATFV-GQDLPLLR-IMPNMNAQILQSSTALTGNALVSQELQARVRDL 143 (259)
T ss_dssp GHHHHHTT----SCCCSCEEECCTTCCHH--HHHHHH-CTTSCEEE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHH
T ss_pred hHHHHHHH----hccCCEEEEeCCCCCHH--HHHHhc-CCCCCEEE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHH
Confidence 67776654 34788999996554432 233333 34566776 5556666666777 566766 88999999999
Q ss_pred HHHHhccCCCCCCeEEEeCCchhhHHHHhH--HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhh-hH
Q 011394 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMI--HNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSF-LI 239 (487)
Q Consensus 163 l~~ig~~~~~~~~~~~~~G~~G~g~~~K~v--~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~-~~ 239 (487)
|+.+| + ++++++.....++++. .|.+.+.++..++|+ +.+.| +|++++.+++. .+..+++ ++
T Consensus 144 l~~~G-~-------~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~---~~~~G-l~~~~~~~~~~---~~~~~~~~~~ 208 (259)
T 2ahr_A 144 TDSFG-S-------TFDISEKDFDTFTALAGSSPAYIYLFIEALAKA---GVKNG-IPKAKALEIVT---QTVLASASNL 208 (259)
T ss_dssp HHTTE-E-------EEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH---HHHHHHHHHH
T ss_pred HHhCC-C-------EEEecHHHccHHHHHhccHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH---HHHHHHHHHH
Confidence 99998 3 4788886666666663 355666667777776 67788 99999988874 3333344 33
Q ss_pred hhhc--cccccccCCCCchhHHhhhhcc
Q 011394 240 EITA--DIFGIKDDKGDGYLVDKVLDKT 265 (487)
Q Consensus 240 ~~~~--~~l~~~~~~~~~~~l~~i~~~~ 265 (487)
.... +.+..++.++|++.+...++++
T Consensus 209 ~~~~~~p~~l~~~~~~p~~~~~~~~~~l 236 (259)
T 2ahr_A 209 KTSSQSPHDFIDAICSPGGTTIAGLMEL 236 (259)
T ss_dssp HHSSSCHHHHHHHHCCTTSHHHHHHHHH
T ss_pred HhcCCCHHHHHHhCCCCChhHHHHHHHH
Confidence 2221 2222122345666666655553
No 45
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.84 E-value=1.9e-20 Score=184.25 Aligned_cols=200 Identities=11% Similarity=0.120 Sum_probs=160.1
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
||+|+|||+ |.||..+|..|+++|++|++|||++++.+.+.+.+ +.. .++.++++. +|+||+|||+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-------~~~-~~~~~~~~~---aDvVi~av~~~- 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMG-------IPL-TDGDGWIDE---ADVVVLALPDN- 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTT-------CCC-CCSSGGGGT---CSEEEECSCHH-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcC-------CCc-CCHHHHhcC---CCEEEEcCCch-
Confidence 579999999 99999999999999999999999999988877632 233 356666665 99999999986
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE-ecCCCCCh------hhhcCC-------C-c--cc
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL-GMGVSGGE------EGARHG-------P-S--LM 148 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i-~~pvsgg~------~~a~~G-------~-~--i~ 148 (487)
.++++++++.+.+.++.+|||+|+..+... +.+ + ..+..|+ .+|++|++ .....| . . +.
T Consensus 79 ~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~--l~~-~-~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~ 154 (286)
T 3c24_A 79 IIEKVAEDIVPRVRPGTIVLILDAAAPYAG--VMP-E-RADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCAL 154 (286)
T ss_dssp HHHHHHHHHGGGSCTTCEEEESCSHHHHHT--CSC-C-CTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCchhHH--HHh-h-hCCCeEEecCCCCccccccccchhhccCcccccccceeeeec
Confidence 589999999998999999999988764322 222 2 2367899 88999887 556677 2 2 23
Q ss_pred cCCCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHH
Q 011394 149 PGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV-GKLTNEELQNVFT 227 (487)
Q Consensus 149 ~gg~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~-g~i~~~~i~~v~~ 227 (487)
.+++++.++.++++|+.+|.+. ..++++++.+.+.+.|.+.|+....++..++|++..+.+. | +|++++.+++.
T Consensus 155 ~~~~~~~~~~v~~l~~~~G~~~----~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~G-l~~~~~~~~~~ 229 (286)
T 3c24_A 155 MQGPEEHYAIGADICETMWSPV----TRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYG-IDRQAALDFMI 229 (286)
T ss_dssp EESCTHHHHHHHHHHHHHTCSE----EEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhcCCc----ceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH
Confidence 5689999999999999999710 0258888888888779999998889999999988776655 8 99999988874
No 46
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.84 E-value=3.5e-21 Score=193.85 Aligned_cols=275 Identities=12% Similarity=0.055 Sum_probs=172.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc---C-CCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE---G-DLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~---g-~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
.|||+|||+|.||..||.+|+++|++|++|||++++++.+.+.+... + ..++..++++++ ++. +|+||+|||
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~---aDvVil~vk 89 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKK---EDILVIAIP 89 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCT---TEEEEECSC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcC---CCEEEEECC
Confidence 47999999999999999999999999999999999999888765210 0 001356678877 665 999999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCch-hHHHHHHHHHHc-C--CeEEecCCCCChhhhcCCC-c-cccCCCHHHH
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAEL-G--LLYLGMGVSGGEEGARHGP-S-LMPGGSFEAY 156 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~-g--~~~i~~pvsgg~~~a~~G~-~-i~~gg~~~~~ 156 (487)
+ .++++++.++.+ ++++||+++++... +.+.+.+.+.+. + ..+..+|....+ ...|. + +..|++. +
T Consensus 90 ~-~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~--~~~g~~~~~~~g~~~--~ 161 (335)
T 1z82_A 90 V-QYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEE--VAKKLPTAVTLAGEN--S 161 (335)
T ss_dssp G-GGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHH--HHTTCCEEEEEEETT--H
T ss_pred H-HHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHH--HhCCCceEEEEEehh--H
Confidence 6 588998877655 78999999976433 333445554433 2 223344433211 12454 3 3444433 7
Q ss_pred HHHHHHHHHHhccCCCCCCeEEEeCCc-----------------hhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCH
Q 011394 157 KYIEDILLKVAAQVPDSGPCVTYVSKG-----------------GSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTN 219 (487)
Q Consensus 157 ~~v~~ll~~ig~~~~~~~~~~~~~G~~-----------------G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~ 219 (487)
+.++++|+..+.+ +.+.++. |.+..+|+.+|.+...+..++.|+..++++.| +++
T Consensus 162 ~~~~~ll~~~g~~-------~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G-~~~ 233 (335)
T 1z82_A 162 KELQKRISTEYFR-------VYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFG-ADQ 233 (335)
T ss_dssp HHHHHHHCCSSEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCH
T ss_pred HHHHHHhCCCCEE-------EEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhC-CCh
Confidence 8889999877754 2443331 23344566788888889999999999999999 998
Q ss_pred HHHHHHH---HhhccCcchhhhHhhh--ccccccccCCCCchhHHhhhhccCC-----CCchHHHHHHHHHcCCCchhHH
Q 011394 220 EELQNVF---TEWNKGELLSFLIEIT--ADIFGIKDDKGDGYLVDKVLDKTGM-----KGTGKWTVQQAADLSVAAPTIA 289 (487)
Q Consensus 220 ~~i~~v~---~~~~~~~~~s~~~~~~--~~~l~~~~~~~~~~~l~~i~~~~~~-----kgtg~~~~~~a~~~gv~~P~~~ 289 (487)
+++.++. ..+.. ..++..+.. ...+..+ + ..+.+.+..+. |..| .+++.|+++|+|+|+..
T Consensus 234 ~~~~~l~~~~~~~~t--~~s~~~~n~~~~~~~~~g--~----~~~~~~~~~g~~~e~~~~~~-~v~~~a~~~gv~~P~~~ 304 (335)
T 1z82_A 234 KTFMGLAGIGDLMVT--CNSRYSRNRRFGELIARG--F----NPLKLLESSNQVVEGAFTVK-AVMKIAKENKIDMPISE 304 (335)
T ss_dssp HHHTSTTTHHHHHHH--HHCTTCHHHHHHHHHHHT--C----CHHHHHHTCSSCCTHHHHHH-HHHHHHHHTTCCCHHHH
T ss_pred hhhcccccccceeee--ccCccCcHHHHHHHHhCC--C----CHHHHHHhcCCeeeHHHHHH-HHHHHHHHhCCCCcHHH
Confidence 8764421 00000 001111110 1111111 1 12222211111 1122 67889999999999987
Q ss_pred HHHHHHHhhccchHHHHHHHhhc
Q 011394 290 SSLDARFLSGLKEERVEAAKVFK 312 (487)
Q Consensus 290 ~a~~~r~~s~~~~~r~~~~~~~~ 312 (487)
+. . +.+...++.+.....++.
T Consensus 305 ~v-~-~~~~~~~~~~~~~~~l~~ 325 (335)
T 1z82_A 305 EV-Y-RVVYEGKPPLQSMRDLMR 325 (335)
T ss_dssp HH-H-HHHHSCCCHHHHHHHHHC
T ss_pred HH-H-HHHhCCCCHHHHHHHHHc
Confidence 53 3 444555666666666653
No 47
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.83 E-value=2.9e-20 Score=185.14 Aligned_cols=252 Identities=15% Similarity=0.160 Sum_probs=167.1
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-----C-CcEEEEeCChHHHHHHHH-hhhhcCC-------CCccccCCHHHHHhhcC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-----G-FPISVYNRTTSKVDETVE-RAKKEGD-------LPLFGFRDPESFVNSIQ 72 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-----G-~~V~v~dr~~~~~~~l~~-~~~~~g~-------~~~~~~~s~~e~~~~l~ 72 (487)
+|||+|||+|.||..+|.+|+++ | ++|++||| +++++.+.+ .+..... .++..+++. +.+..
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 83 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNP-AEVGT-- 83 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCH-HHHCC--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCc-cccCC--
Confidence 46999999999999999999999 9 99999999 888888876 3321000 001111333 44444
Q ss_pred CCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCC-h-hhhcCCCc
Q 011394 73 KPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGG-E-EGARHGPS 146 (487)
Q Consensus 73 ~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pvsgg-~-~~a~~G~~ 146 (487)
+|+||+|||+. +++++++++.+.+.++++||+++++. ...+.+.+.+.+ .|+.++++++++. . ..+..|..
T Consensus 84 -~D~vil~vk~~-~~~~v~~~i~~~l~~~~~iv~~~nG~-~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~ 160 (317)
T 2qyt_A 84 -VDYILFCTKDY-DMERGVAEIRPMIGQNTKILPLLNGA-DIAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADREL 160 (317)
T ss_dssp -EEEEEECCSSS-CHHHHHHHHGGGEEEEEEEEECSCSS-SHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred -CCEEEEecCcc-cHHHHHHHHHhhcCCCCEEEEccCCC-CcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCce
Confidence 99999999987 68999999999998899999998875 333444444433 3556677777642 1 22233443
Q ss_pred c-c----cCCCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHH-------------------HHHH
Q 011394 147 L-M----PGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEY-------------------GDMQ 202 (487)
Q Consensus 147 i-~----~gg~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~-------------------~~~~ 202 (487)
+ + .+++.+.+ .+.++|+..+.+ +.+.++.+.+.+.|++.|.+.. ....
T Consensus 161 ~~ig~~~~~~~~~~~-~~~~ll~~~g~~-------~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~ 232 (317)
T 2qyt_A 161 FYFGSGLPEQTDDEV-RLAELLTAAGIR-------AYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLS 232 (317)
T ss_dssp EEEECCSSSCCHHHH-HHHHHHHHTTCC-------EECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHH
T ss_pred EEEcCCCCCCcCHHH-HHHHHHHHCCCC-------CEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3 3 33457777 899999998854 4777889999999999998754 3458
Q ss_pred HHHHHHHHHHHhCCCCHH--HHHHHHHhhccCcchhhhHhhhccccccccCCCCchh--HHhhhhccCCCCchHHHHHHH
Q 011394 203 LIAEAYDVLKSVGKLTNE--ELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYL--VDKVLDKTGMKGTGKWTVQQA 278 (487)
Q Consensus 203 ~~~Ea~~l~~~~g~i~~~--~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~--l~~i~~~~~~kgtg~~~~~~a 278 (487)
++.|++.++++.| ++++ .+.+++...... .......++. ++..++. ++.+ .| ++++.|
T Consensus 233 ~~~E~~~v~~a~G-~~~~~~~~~~~~~~~~~~-----~~~~~~sm~~---d~~~g~~~E~~~~--------~g-~~~~~a 294 (317)
T 2qyt_A 233 LLEEVAELFRAKY-GQVPDDVVQQLLDKQRKM-----PPESTSSMHS---DFLQGGSTEVETL--------TG-YVVREA 294 (317)
T ss_dssp HHHHHHHHHHHHT-SCCCSSHHHHHHHHHHHC----------------------------CTT--------TH-HHHHHH
T ss_pred HHHHHHHHHHHcC-CCCChHHHHHHHHHHhcc-----CCCCCChHHH---HHHcCCccCHHHH--------hh-HHHHHH
Confidence 9999999999999 9864 566665432110 0011111111 1222222 3332 22 789999
Q ss_pred HHcCCCchhHHHH
Q 011394 279 ADLSVAAPTIASS 291 (487)
Q Consensus 279 ~~~gv~~P~~~~a 291 (487)
+++|+|+|+....
T Consensus 295 ~~~gv~~P~~~~~ 307 (317)
T 2qyt_A 295 EALRVDLPMYKRM 307 (317)
T ss_dssp HHTTCCCHHHHHH
T ss_pred HHcCCCCCHHHHH
Confidence 9999999998753
No 48
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.83 E-value=2.2e-20 Score=181.69 Aligned_cols=197 Identities=18% Similarity=0.166 Sum_probs=151.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCc-EEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFP-ISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
+|+|+|||+|.||..++..|++.|++ |.+|||++++.+++.+.. ++..+.+++++++. +|+||+++|+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~---~Dvvi~av~~~- 79 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV------EAEYTTDLAEVNPY---AKLYIVSLKDS- 79 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT------TCEEESCGGGSCSC---CSEEEECCCHH-
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc------CCceeCCHHHHhcC---CCEEEEecCHH-
Confidence 57999999999999999999999999 999999999998887652 24567788877665 99999999987
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccc-cCCCHHHHHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLM-PGGSFEAYKYIEDILL 164 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~-~gg~~~~~~~v~~ll~ 164 (487)
.+.++++++.+.++++++||+++++.+.+. +.+.+...+..+..+|++|++.....+..++ .+++++.++.++++|+
T Consensus 80 ~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 157 (266)
T 3d1l_A 80 AFAELLQGIVEGKREEALMVHTAGSIPMNV--WEGHVPHYGVFYPMQTFSKQREVDFKEIPFFIEASSTEDAAFLKAIAS 157 (266)
T ss_dssp HHHHHHHHHHTTCCTTCEEEECCTTSCGGG--STTTCSSEEEEEECCCC---CCCCCTTCCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcEEEECCCCCchHH--HHHHHHhccCcCCceecCCCchhhcCCCeEEEecCCHHHHHHHHHHHH
Confidence 678899999888889999999999987654 3333333355566778877544322333444 4889999999999999
Q ss_pred HHhccCCCCCCeEEEeCCch---hhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011394 165 KVAAQVPDSGPCVTYVSKGG---SGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFT 227 (487)
Q Consensus 165 ~ig~~~~~~~~~~~~~G~~G---~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~ 227 (487)
.+|.+ ++++++.+ -...+|+++|.. ..+..++|+ ++++.| ++++++.+++.
T Consensus 158 ~~g~~-------~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l~~~~G-l~~~~~~~l~~ 211 (266)
T 3d1l_A 158 TLSNR-------VYDADSEQRKSLHLAAVFTCNFT--NHMYALAAE--LLKKYN-LPFDVMLPLID 211 (266)
T ss_dssp TTCSC-------EEECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHTT-CCGGGGHHHHH
T ss_pred hcCCc-------EEEeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHcC-CCHHHHHHHHH
Confidence 99865 58888755 456789999984 345666776 567888 99999888874
No 49
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.82 E-value=3.6e-21 Score=189.14 Aligned_cols=256 Identities=18% Similarity=0.239 Sum_probs=168.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCC-CCcc-ccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGD-LPLF-GFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~-~~~~-~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
|||+|||+|.||..+|.+|+++|++|++|||++++.+.+...+.. +. .... ..++. +.++. +|+||+|||+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~~-~~~~~---~d~vi~~v~~~- 74 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETD-GSIFNESLTANDP-DFLAT---SDLLLVTLKAW- 74 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTT-SCEEEEEEEESCH-HHHHT---CSEEEECSCGG-
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCC-CceeeeeeeecCc-cccCC---CCEEEEEecHH-
Confidence 589999999999999999999999999999998765443221100 00 0001 13343 45555 99999999987
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH--cCCeEEecCCCCC-hhhhcCCC-cccc-CCCHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE--LGLLYLGMGVSGG-EEGARHGP-SLMP-GGSFEAYKYIE 160 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~--~g~~~i~~pvsgg-~~~a~~G~-~i~~-gg~~~~~~~v~ 160 (487)
+++++++++.+.+.++++||+++++. ...+.+.+.+.+ .|..+.++...+. ...+..|. .+.+ +++++.++.++
T Consensus 75 ~~~~v~~~l~~~l~~~~~vv~~~~g~-~~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~g~~~i~~~~~~~~~~~~~~ 153 (291)
T 1ks9_A 75 QVSDAVKSLASTLPVTTPILLIHNGM-GTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLA 153 (291)
T ss_dssp GHHHHHHHHHTTSCTTSCEEEECSSS-CTTGGGTTCCSCEEEEEECCEEEEETTEEEEEECCCEEEEESSGGGTTCTHHH
T ss_pred hHHHHHHHHHhhCCCCCEEEEecCCC-CcHHHHHHhcCCeEEEEEeEccEEcCCEEEEecccceEEccCCCCcchHHHHH
Confidence 68999999999999999999998765 222233333322 1222212222222 23344566 4443 45677788999
Q ss_pred HHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHH------------------HHHHHHHHHHHHHHHHhCCCCH--H
Q 011394 161 DILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIE------------------YGDMQLIAEAYDVLKSVGKLTN--E 220 (487)
Q Consensus 161 ~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~------------------~~~~~~~~Ea~~l~~~~g~i~~--~ 220 (487)
++|+.++.+ +.+.++.+.+.+.|++.|... ..+.+++.|+..++++.| ++. +
T Consensus 154 ~ll~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G-~~~~~~ 225 (291)
T 1ks9_A 154 DILQTVLPD-------VAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREG-HHTSAE 225 (291)
T ss_dssp HHHHTTSSC-------EEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHT-CCCCHH
T ss_pred HHHHhcCCC-------CeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcC-CCCCHH
Confidence 999998865 577888999999999999987 678899999999999999 886 4
Q ss_pred HHHHHHHhh-cc-CcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHH
Q 011394 221 ELQNVFTEW-NK-GELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARF 296 (487)
Q Consensus 221 ~i~~v~~~~-~~-~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~ 296 (487)
++.+.+... .. +...|.++ .++... .. ..++.+ .| ++++.|+++|+|+|+.... .+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~ssm~---~d~~~g-~~----~e~~~~--------~g-~~~~~a~~~gv~~P~~~~~-~~~~ 285 (291)
T 1ks9_A 226 DLRDYVMQVIDATAENISSML---QDIRAL-RH----TEIDYI--------NG-FLLRRARAHGIAVPENTRL-FEMV 285 (291)
T ss_dssp HHHHHHHHHHHHTTTCCCHHH---HHHHTT-CC----CSGGGT--------HH-HHHHHHHHHTCCCHHHHHH-HHHH
T ss_pred HHHHHHHHHHhcCCCCCChHH---HHHHcC-Cc----cHHHHH--------HH-HHHHHHHHhCCCCCHHHHH-HHHH
Confidence 543322221 11 11222232 222221 11 122322 23 6889999999999998753 4433
No 50
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.82 E-value=2.2e-19 Score=180.28 Aligned_cols=201 Identities=12% Similarity=0.068 Sum_probs=144.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeC--ChHHHHHHHHhhhhc--C-C-CCccccC--CHHHHHhhcCCCcEEEE
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNR--TTSKVDETVERAKKE--G-D-LPLFGFR--DPESFVNSIQKPRVIIM 79 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr--~~~~~~~l~~~~~~~--g-~-~~~~~~~--s~~e~~~~l~~advIi~ 79 (487)
|||+|||+|.||..+|..|+++|++|++||| ++++++.+.+.+... + . .++..++ +++++++. +|+||+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~D~vi~ 77 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN---AEVVLL 77 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT---CSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhc---CCEEEE
Confidence 5899999999999999999999999999999 999988877654210 0 0 0123444 67776665 999999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCCC---c-hhHHHHHHHHHHc-CC----eEEecCCCCChhhhcCCC--ccc
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW---Y-ENTERREKAMAEL-GL----LYLGMGVSGGEEGARHGP--SLM 148 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~---~-~~~~~~~~~l~~~-g~----~~i~~pvsgg~~~a~~G~--~i~ 148 (487)
|||+. +++++++++.+ +.++++||+++++. + ...+.+.+.+.+. |. .+...|.. ......|. .++
T Consensus 78 ~v~~~-~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~--~~~~~~g~~~~~~ 153 (335)
T 1txg_A 78 GVSTD-GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAI--AREVAKRMPTTVV 153 (335)
T ss_dssp CSCGG-GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCC--HHHHHTTCCEEEE
T ss_pred cCChH-HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCc--HHHHHccCCcEEE
Confidence 99986 78999999999 98999999998765 2 3444455555442 32 12233322 11111233 344
Q ss_pred c-CCCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCc-----------------hhhHHHHhH-----HHHHHHHHHHHHH
Q 011394 149 P-GGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKG-----------------GSGNFVKMI-----HNGIEYGDMQLIA 205 (487)
Q Consensus 149 ~-gg~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~-----------------G~g~~~K~v-----~N~~~~~~~~~~~ 205 (487)
+ +++++..+.++++|+..+.+ +.+.++. |....+|+. +|.+...+.+++.
T Consensus 154 ~~~~~~~~~~~~~~ll~~~g~~-------~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~ 226 (335)
T 1txg_A 154 FSSPSESSANKMKEIFETEYFG-------VEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAIN 226 (335)
T ss_dssp EECSCHHHHHHHHHHHCBTTEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHhCCCcEE-------EEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence 4 45788899999999987764 3555654 333445777 8888888999999
Q ss_pred HHHHHHHHhCCCCHHHHH
Q 011394 206 EAYDVLKSVGKLTNEELQ 223 (487)
Q Consensus 206 Ea~~l~~~~g~i~~~~i~ 223 (487)
|+..++++.| ++++++.
T Consensus 227 E~~~la~~~G-~~~~~~~ 243 (335)
T 1txg_A 227 EMAELIEILG-GDRETAF 243 (335)
T ss_dssp HHHHHHHHHT-SCGGGGG
T ss_pred HHHHHHHHHC-CCcchhh
Confidence 9999999999 9987653
No 51
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.81 E-value=1.1e-19 Score=185.82 Aligned_cols=284 Identities=10% Similarity=0.064 Sum_probs=179.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC-------CcEEEEeCChH-----HHHHHHHhhhhc----C---CCCccccCCHHHH
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG-------FPISVYNRTTS-----KVDETVERAKKE----G---DLPLFGFRDPESF 67 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G-------~~V~v~dr~~~-----~~~~l~~~~~~~----g---~~~~~~~~s~~e~ 67 (487)
||||+|||+|.||.+||..|+++| ++|++|||+++ +++.+.+.+... + ..++..+++++++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 568999999999999999999999 99999999998 888876643110 0 0034566788888
Q ss_pred HhhcCCCcEEEEecCCChhHHHHHHHHhh----cccCCCEEEecCCCCch---hHHHHHHHHHHc-C--CeEEecCCCCC
Q 011394 68 VNSIQKPRVIIMLVKAGAPVDETIKTLSA----YMEKGDCIIDGGNEWYE---NTERREKAMAEL-G--LLYLGMGVSGG 137 (487)
Q Consensus 68 ~~~l~~advIi~~vp~~~~v~~vl~~l~~----~l~~g~iiId~st~~~~---~~~~~~~~l~~~-g--~~~i~~pvsgg 137 (487)
++. +|+||+|||+ .+++++++++.+ .+.++++||+++++... ..+.+.+.+.+. + ..++.+|....
T Consensus 101 ~~~---aDvVilav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a~ 176 (375)
T 1yj8_A 101 IND---ADLLIFIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIPCSALSGANIAM 176 (375)
T ss_dssp HTT---CSEEEECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSCEEEEECSCCHH
T ss_pred HcC---CCEEEEcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCCEEEEeCCchHH
Confidence 776 9999999997 589999999998 89899999999976443 122233333331 2 22333343221
Q ss_pred hhhhcCCC---ccccCCCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCch-----------------hhHHHHhHHHHHH
Q 011394 138 EEGARHGP---SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGG-----------------SGNFVKMIHNGIE 197 (487)
Q Consensus 138 ~~~a~~G~---~i~~gg~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G-----------------~g~~~K~v~N~~~ 197 (487)
+. ..|. .++.+++++..+.++++|+..+.+ +++.++.- ....+|+.+|...
T Consensus 177 ~v--~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~-------~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~ 247 (375)
T 1yj8_A 177 DV--AMENFSEATIGGNDKDSLVIWQRVFDLPYFK-------INCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKS 247 (375)
T ss_dssp HH--HTTCCEEEEEECSCHHHHHHHHHHHCBTTEE-------EEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HH--HhCCCeEEEEecCCHHHHHHHHHHhCCCCeE-------EEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Confidence 11 2333 344567888899999999987754 35555432 2222355578888
Q ss_pred HHHHHHHHHHHHHHHHhC-CCCHHHHHH------HHHhhccCcchhhhHhhhcccccc-ccCCCCchhHHhhhhcc--CC
Q 011394 198 YGDMQLIAEAYDVLKSVG-KLTNEELQN------VFTEWNKGELLSFLIEITADIFGI-KDDKGDGYLVDKVLDKT--GM 267 (487)
Q Consensus 198 ~~~~~~~~Ea~~l~~~~g-~i~~~~i~~------v~~~~~~~~~~s~~~~~~~~~l~~-~~~~~~~~~l~~i~~~~--~~ 267 (487)
.....++.|+..++++.| |++++++.+ ++.+... .+++.+ ...+.. ++.++ ++.+.++. ++
T Consensus 248 a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~--~~~~~~---~~~~~~~g~~~~----~~d~~~~~~~g~ 318 (375)
T 1yj8_A 248 AIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLA--GRNAKC---SAEFIKSTPKKT----WEELENEILKGQ 318 (375)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSS--SSHHHH---HHHHHHHTTSSC----HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeC--CccHHH---HHHHHhcCCCCC----HHHHHHhhcCCc
Confidence 899999999999999995 598876532 2221111 111111 111111 00011 11111111 11
Q ss_pred CCch----HHHHHHHHHcCC--CchhHHHHHHHHHhhccchHHHHHHHhhcCC
Q 011394 268 KGTG----KWTVQQAADLSV--AAPTIASSLDARFLSGLKEERVEAAKVFKSG 314 (487)
Q Consensus 268 kgtg----~~~~~~a~~~gv--~~P~~~~a~~~r~~s~~~~~r~~~~~~~~~~ 314 (487)
+-++ ..+++.|+++|+ |+|+.... .+.+...++.+..+..+...|
T Consensus 319 ~~E~~~~~~~v~~~a~~~gv~~~~P~~~~v--~~~~~~~~~~~~~~~~l~~~~ 369 (375)
T 1yj8_A 319 KLQGTVTLKYVYHMIKEKNMTNEFPLFTVL--HKISFENEDPSSLLKTFMNNK 369 (375)
T ss_dssp CCHHHHHHHHHHHHHHHTTCGGGCHHHHHH--HHHHHSCCCTTHHHHHHSSCC
T ss_pred EeeHHHHHHHHHHHHHHhCCCCCCCHHHHH--HHHHhCCCCHHHHHHHHHcCc
Confidence 1111 157789999999 99998753 455556667777777665443
No 52
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.81 E-value=1.5e-18 Score=173.63 Aligned_cols=195 Identities=14% Similarity=0.138 Sum_probs=141.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC----CcEEEEeCChH--HHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG----FPISVYNRTTS--KVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G----~~V~v~dr~~~--~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
+|||+|||+|.||.+||.+|+++| ++|++|||+++ +++.+.+.+ +..+.++.++++. +|+||+|
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G-------~~~~~~~~e~~~~---aDvVila 91 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMG-------VKLTPHNKETVQH---SDVLFLA 91 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHT-------CEEESCHHHHHHH---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcC-------CEEeCChHHHhcc---CCEEEEE
Confidence 578999999999999999999999 89999999986 777776443 5567788888887 9999999
Q ss_pred cCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHc--CCeEEecCCCCChhhhcCCCccccCCC---HHH
Q 011394 81 VKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL--GLLYLGMGVSGGEEGARHGPSLMPGGS---FEA 155 (487)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~--g~~~i~~pvsgg~~~a~~G~~i~~gg~---~~~ 155 (487)
||+ .++++++.++.+.+.++++||+++++.+.. .+.+.+.+. +.+++.+... .+.....|.+++++|+ ++.
T Consensus 92 v~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~--~l~~~l~~~~~~~~vv~~~p~-~p~~~~~g~~v~~~g~~~~~~~ 167 (322)
T 2izz_A 92 VKP-HIIPFILDEIGADIEDRHIVVSCAAGVTIS--SIEKKLSAFRPAPRVIRCMTN-TPVVVREGATVYATGTHAQVED 167 (322)
T ss_dssp SCG-GGHHHHHHHHGGGCCTTCEEEECCTTCCHH--HHHHHHHTTSSCCEEEEEECC-GGGGGTCEEEEEEECTTCCHHH
T ss_pred eCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCCHH--HHHHHHhhcCCCCeEEEEeCC-cHHHHcCCeEEEEeCCCCCHHH
Confidence 995 689999999999898999999998877543 345555542 3456543222 2222234445666665 788
Q ss_pred HHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHh--HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011394 156 YKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKM--IHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFT 227 (487)
Q Consensus 156 ~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~--v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~ 227 (487)
++.++++|+.+|.. +++.+........+ ..+.+.+.++..++|+ +.+.| ++++++.+++.
T Consensus 168 ~~~v~~ll~~~G~~--------~~~~e~~~~~~~a~~g~gpa~~~~~~eala~a---~~~~G-l~~~~a~~l~~ 229 (322)
T 2izz_A 168 GRLMEQLLSSVGFC--------TEVEEDLIDAVTGLSGSGPAYAFTALDALADG---GVKMG-LPRRLAVRLGA 229 (322)
T ss_dssp HHHHHHHHHTTEEE--------EECCGGGHHHHHHHTTTHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCE--------EEeCHHHHHHHHHHhcCHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH
Confidence 99999999999864 34444333333333 2245555556666665 56778 99999888874
No 53
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.81 E-value=1.6e-19 Score=175.08 Aligned_cols=234 Identities=14% Similarity=0.112 Sum_probs=161.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
|||+|||+|.||..+|.+|+++| ++|++|||++++.+++.+.. ++..+.++++++ . +|+||+|+| +.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~------g~~~~~~~~~~~-~---~D~vi~~v~-~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL------GVETSATLPELH-S---DDVLILAVK-PQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT------CCEEESSCCCCC-T---TSEEEECSC-HHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhc------CCEEeCCHHHHh-c---CCEEEEEeC-chh
Confidence 58999999999999999999999 99999999999998887642 245566776666 5 999999999 567
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-ccccCC--CHHHHHHHHHHH
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGG--SFEAYKYIEDIL 163 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~i~~gg--~~~~~~~v~~ll 163 (487)
+++++.++.+ . +++||+++++.+. +.+.+.+. .+.+++.+ +.+.+.....|. .+++++ +++.++.++++|
T Consensus 70 ~~~v~~~l~~--~-~~ivv~~~~g~~~--~~l~~~~~-~~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~ 142 (263)
T 1yqg_A 70 MEAACKNIRT--N-GALVLSVAAGLSV--GTLSRYLG-GTRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIM 142 (263)
T ss_dssp HHHHHTTCCC--T-TCEEEECCTTCCH--HHHHHHTT-SCCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHhcc--C-CCEEEEecCCCCH--HHHHHHcC-CCCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHH
Confidence 8888876655 4 8999999555543 33444443 35678877 666666666676 577777 889999999999
Q ss_pred HHHhccCCCCCCeEEEeC-C---------chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCc
Q 011394 164 LKVAAQVPDSGPCVTYVS-K---------GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGE 233 (487)
Q Consensus 164 ~~ig~~~~~~~~~~~~~G-~---------~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~ 233 (487)
+.+|.. ++++ + .|++. .+.+..+..+.|+ +++.| ++++++.+++... .
T Consensus 143 ~~~g~~--------~~~~~~~~~~~~~al~g~~~-------~~~~~~~~~l~e~---~~~~G-~~~~~~~~~~~~~---~ 200 (263)
T 1yqg_A 143 KSVGLT--------VWLDDEEKMHGITGISGSGP-------AYVFYLLDALQNA---AIRQG-FDMAEARALSLAT---F 200 (263)
T ss_dssp HTTEEE--------EECSSTTHHHHHHHHTTSHH-------HHHHHHHHHHHHH---HHHTT-CCHHHHHHHHHHH---H
T ss_pred HhCCCE--------EEeCChhhccHHHHHHccHH-------HHHHHHHHHHHHH---HHHcC-CCHHHHHHHHHHH---H
Confidence 999864 3777 4 23332 3345556666666 67788 9999888887432 2
Q ss_pred chhh-hHhhhc--c-ccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHHHHH
Q 011394 234 LLSF-LIEITA--D-IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARF 296 (487)
Q Consensus 234 ~~s~-~~~~~~--~-~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~~r~ 296 (487)
.+++ ++.... + .+... .+.|++.+...++ ...+.|++.|+..+ +.+-+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-------------~l~~~~~~~~~~~a-~~~~~ 252 (263)
T 1yqg_A 201 KGAVALAEQTGEDFEKLQKN-VTSKGGTTHEAVE-------------AFRRHRVAEAISEG-VCACV 252 (263)
T ss_dssp HHHHHHHHHHCCCHHHHHHH-TCCTTSHHHHHHH-------------HHHHTTHHHHHHHH-HHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHh-cCCCChhHHHHHH-------------HHHHCCHHHHHHHH-HHHHH
Confidence 2232 333221 2 23322 2455555554443 34668899888754 34433
No 54
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.78 E-value=3.1e-18 Score=173.41 Aligned_cols=202 Identities=8% Similarity=0.028 Sum_probs=141.9
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC-------CcEEEEeCChH-----HHHHHHHhhhhc----C---CCCccccCCHHHH
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG-------FPISVYNRTTS-----KVDETVERAKKE----G---DLPLFGFRDPESF 67 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G-------~~V~v~dr~~~-----~~~~l~~~~~~~----g---~~~~~~~~s~~e~ 67 (487)
+|||+|||+|.||..+|..|+++| ++|++|||+++ +.+.+.+.+... + ..++..+++++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 368999999999999999999999 99999999998 887776532110 0 0024556788887
Q ss_pred HhhcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCc---hhHHHHHHHHHHc-C--CeEEecCCCCChhhh
Q 011394 68 VNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWY---ENTERREKAMAEL-G--LLYLGMGVSGGEEGA 141 (487)
Q Consensus 68 ~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~---~~~~~~~~~l~~~-g--~~~i~~pvsgg~~~a 141 (487)
++. +|+||+|||+ ..++++++++.+.+.++++||+++++.. ...+.+.+.+.+. + ..++.+|.... ..
T Consensus 88 ~~~---aD~Vilav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a~--~v 161 (354)
T 1x0v_A 88 AED---ADILIFVVPH-QFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIPMSVLMGANIAS--EV 161 (354)
T ss_dssp HTT---CSEEEECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCCEEEEECSCCHH--HH
T ss_pred HcC---CCEEEEeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCCEEEEECCCcHH--HH
Confidence 776 9999999997 4899999999999999999999998653 2222222322221 3 22233343211 11
Q ss_pred cCCC---ccccCCCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHH-----------------hHHHHHHHHHH
Q 011394 142 RHGP---SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVK-----------------MIHNGIEYGDM 201 (487)
Q Consensus 142 ~~G~---~i~~gg~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K-----------------~v~N~~~~~~~ 201 (487)
..|. .++.+++++..+.++++|+..+.+ +++.++.-...+.| +.+|.......
T Consensus 162 ~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~-------~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~ 234 (354)
T 1x0v_A 162 ADEKFCETTIGCKDPAQGQLLKELMQTPNFR-------ITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIR 234 (354)
T ss_dssp HTTCCEEEEEECSSHHHHHHHHHHHCBTTEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HhcCCceEEEEECCHHHHHHHHHHhCCCCEE-------EEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHH
Confidence 2343 234566788899999999988764 35555533333333 34787888899
Q ss_pred HHHHHHHHHHHHhCCC---CHHHH
Q 011394 202 QLIAEAYDVLKSVGKL---TNEEL 222 (487)
Q Consensus 202 ~~~~Ea~~l~~~~g~i---~~~~i 222 (487)
.++.|+..++++.| + +++++
T Consensus 235 ~~~~E~~~la~a~G-~~~~~~~~~ 257 (354)
T 1x0v_A 235 LGLMEMIAFAKLFC-SGPVSSATF 257 (354)
T ss_dssp HHHHHHHHHHHHHS-SSCCCGGGG
T ss_pred HHHHHHHHHHHHhc-CCCCCcccc
Confidence 99999999999999 8 87664
No 55
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.78 E-value=1e-17 Score=166.87 Aligned_cols=170 Identities=16% Similarity=0.220 Sum_probs=135.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHH-HHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPES-FVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e-~~~~l~~advIi~~vp~ 83 (487)
+|||||||+|.||.++|+.|.++|+ +|++|||++++++.+.+.+.. ...++++++ +++. +|+||+|||.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~-----~~~~~~~~~~~~~~---aDvVilavp~ 104 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII-----DEGTTSIAKVEDFS---PDFVMLSSPV 104 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC-----SEEESCTTGGGGGC---CSEEEECSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCc-----chhcCCHHHHhhcc---CCEEEEeCCH
Confidence 4789999999999999999999999 999999999998887765421 134677888 7776 9999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCC----hhhhc----CCC-cccc---C
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGG----EEGAR----HGP-SLMP---G 150 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pvsgg----~~~a~----~G~-~i~~---g 150 (487)
. .+.++++++.+.++++.+|+|++++.+...+.+.+.+.. +|++ .|++|+ +..+. .|. .+++ +
T Consensus 105 ~-~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~---~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~ 180 (314)
T 3ggo_A 105 R-TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKK 180 (314)
T ss_dssp G-GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTT
T ss_pred H-HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC---CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCC
Confidence 6 688899999999999999999999887666666555433 7886 588884 44343 465 4444 4
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHH
Q 011394 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNG 195 (487)
Q Consensus 151 g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~ 195 (487)
++++.++.++++|+.+|++ ++++++......+.++...
T Consensus 181 ~~~~~~~~v~~l~~~~G~~-------v~~~~~~~hD~~~a~~s~l 218 (314)
T 3ggo_A 181 TDKKRLKLVKRVWEDVGGV-------VEYMSPELHDYVFGVVSHL 218 (314)
T ss_dssp SCHHHHHHHHHHHHHTTCE-------EEECCHHHHHHHHHHHTHH
T ss_pred CCHHHHHHHHHHHHHcCCE-------EEEcCHHHHHHHHHHHHHH
Confidence 6889999999999999976 5888887777777777644
No 56
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.78 E-value=1.8e-17 Score=159.50 Aligned_cols=192 Identities=15% Similarity=0.137 Sum_probs=134.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC----cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF----PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~----~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
+|||+|||+|.||.+++.+|.++|+ +|++|||++++++++.+.. ++..+.++.++++. +|+||+|||
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~------g~~~~~~~~e~~~~---aDvVilav~ 72 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY------GLTTTTDNNEVAKN---ADILILSIK 72 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH------CCEECSCHHHHHHH---CSEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh------CCEEeCChHHHHHh---CCEEEEEeC
Confidence 4799999999999999999999999 9999999999999887643 25677899999887 999999997
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe----cCCCCChhhhcCCC-cccc--CCCHHH
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG----MGVSGGEEGARHGP-SLMP--GGSFEA 155 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~----~pvsgg~~~a~~G~-~i~~--gg~~~~ 155 (487)
+ ..++++++++.+.+.++++||..+++.+.. .+.+.+ ..+..++. .|+.++ .|. .++. +++++.
T Consensus 73 ~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~--~l~~~~-~~~~~~v~~~p~~p~~~~-----~g~~~~~~~~~~~~~~ 143 (247)
T 3gt0_A 73 P-DLYASIINEIKEIIKNDAIIVTIAAGKSIE--STENAF-NKKVKVVRVMPNTPALVG-----EGMSALCPNEMVTEKD 143 (247)
T ss_dssp T-TTHHHHC---CCSSCTTCEEEECSCCSCHH--HHHHHH-CSCCEEEEEECCGGGGGT-----CEEEEEEECTTCCHHH
T ss_pred H-HHHHHHHHHHHhhcCCCCEEEEecCCCCHH--HHHHHh-CCCCcEEEEeCChHHHHc-----CceEEEEeCCCCCHHH
Confidence 6 478999999999999999999766665432 333333 23444443 243332 344 3444 478999
Q ss_pred HHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHHHH
Q 011394 156 YKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDV-LKSVGKLTNEELQNVFT 227 (487)
Q Consensus 156 ~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l-~~~~g~i~~~~i~~v~~ 227 (487)
++.++++|+.+|.. +++++.-.-.++-+... .-.++..+.|++.. +.+.| +|+++..+++.
T Consensus 144 ~~~~~~l~~~~G~~--------~~~~e~~~d~~~a~~g~--gpa~~~~~~eal~~a~~~~G-l~~~~a~~~~~ 205 (247)
T 3gt0_A 144 LEDVLNIFNSFGQT--------EIVSEKLMDVVTSVSGS--SPAYVYMIIEAMADAAVLDG-MPRNQAYKFAA 205 (247)
T ss_dssp HHHHHHHHGGGEEE--------EECCGGGHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCE--------EEeCHHHccHHHHHhcc--HHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH
Confidence 99999999999963 55544221111111111 11234455566555 67888 99999999874
No 57
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.76 E-value=2.1e-17 Score=161.92 Aligned_cols=176 Identities=16% Similarity=0.222 Sum_probs=137.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh-hcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN-SIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~-~l~~advIi~~vp~ 83 (487)
||+|+|||+|.||..+|..|.++|+ +|++|||++++.+.+.+.+.. ...+++++++++ . +|+||+|||+
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~---aDvVilavp~ 72 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII-----DEGTTSIAKVEDFS---PDFVMLSSPV 72 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC-----SEEESCGGGGGGTC---CSEEEECSCH
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCc-----ccccCCHHHHhcCC---CCEEEEcCCH
Confidence 5689999999999999999999999 999999999998876654321 123567777776 6 9999999997
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCC----hhhhc----CCC-cccc---C
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGG----EEGAR----HGP-SLMP---G 150 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pvsgg----~~~a~----~G~-~i~~---g 150 (487)
. .+.+++.++.+.+.++.+|++++++.+...+.+.+.+.. + +++ .|++++ +..+. .|. ++++ +
T Consensus 73 ~-~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~-~--~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~ 148 (281)
T 2g5c_A 73 R-TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK-R--FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKK 148 (281)
T ss_dssp H-HHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-G--EECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSS
T ss_pred H-HHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc-c--ceeeccccCCccCChhhhhhHHhCCCCEEEecCCC
Confidence 6 678888889888999999999998886665556655543 2 665 476653 34443 566 5555 6
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHH
Q 011394 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDM 201 (487)
Q Consensus 151 g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~ 201 (487)
++++.++.++++|+.+|.+ ++++++...+.++|++.|...+...
T Consensus 149 ~~~~~~~~v~~l~~~~g~~-------~~~~~~~~~d~~~~~~~~~~~~~a~ 192 (281)
T 2g5c_A 149 TDKKRLKLVKRVWEDVGGV-------VEYMSPELHDYVFGVVSHLPHAVAF 192 (281)
T ss_dssp SCHHHHHHHHHHHHHTTCE-------EEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCE-------EEEcCHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999975 4788877778999999988765433
No 58
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.76 E-value=4.8e-17 Score=159.72 Aligned_cols=197 Identities=15% Similarity=0.181 Sum_probs=140.0
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh-------cC-C----------CCccccCCHHHHH
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK-------EG-D----------LPLFGFRDPESFV 68 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~-------~g-~----------~~~~~~~s~~e~~ 68 (487)
++||+|||+|.||.+||..|+++|++|++||+++++++.+.+.... .+ . .++..++++++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~ 83 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV 83 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence 5689999999999999999999999999999999988777654100 00 0 0245677888877
Q ss_pred hhcCCCcEEEEecCCChh-HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCC-c
Q 011394 69 NSIQKPRVIIMLVKAGAP-VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-S 146 (487)
Q Consensus 69 ~~l~~advIi~~vp~~~~-v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~-~ 146 (487)
+. +|+||++||+..+ ...++.++.+.++++.++++.+++.+. .++.+.+. ++.++++...+. .+..++ .
T Consensus 84 ~~---aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~--~~la~~~~-~~~~~ig~h~~~---p~~~~~lv 154 (283)
T 4e12_A 84 KD---ADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLP--SDLVGYTG-RGDKFLALHFAN---HVWVNNTA 154 (283)
T ss_dssp TT---CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH--HHHHHHHS-CGGGEEEEEECS---STTTSCEE
T ss_pred cc---CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCH--HHHHhhcC-CCcceEEEccCC---CcccCceE
Confidence 76 9999999998743 456668888889999999977666643 33444432 222333332111 112344 3
Q ss_pred ccc-C--CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Q 011394 147 LMP-G--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQ 223 (487)
Q Consensus 147 i~~-g--g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~ 223 (487)
.++ + .+++.++.++++++.+|.. .++++..+.|. ++ |.+. ...++|++.++++.+ .+++++.
T Consensus 155 evv~~~~t~~~~~~~~~~l~~~~g~~-------~v~v~~~~~g~---i~-nr~~---~~~~~ea~~l~~~g~-~~~~~id 219 (283)
T 4e12_A 155 EVMGTTKTDPEVYQQVVEFASAIGMV-------PIELKKEKAGY---VL-NSLL---VPLLDAAAELLVDGI-ADPETID 219 (283)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHTTCE-------EEECSSCCTTT---TH-HHHH---HHHHHHHHHHHHTTS-CCHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCE-------EEEEecCCCCE---Ee-hHHH---HHHHHHHHHHHHhCC-CCHHHHH
Confidence 333 3 2789999999999999976 47786666675 33 4333 346799999999887 9999999
Q ss_pred HHHH
Q 011394 224 NVFT 227 (487)
Q Consensus 224 ~v~~ 227 (487)
+++.
T Consensus 220 ~~~~ 223 (283)
T 4e12_A 220 KTWR 223 (283)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 59
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.73 E-value=5.1e-17 Score=168.31 Aligned_cols=193 Identities=11% Similarity=0.116 Sum_probs=136.6
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHH--------HHHHhhhhcC------CCCccccCCHHHHHhhc
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVD--------ETVERAKKEG------DLPLFGFRDPESFVNSI 71 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~--------~l~~~~~~~g------~~~~~~~~s~~e~~~~l 71 (487)
.++||+|||+|.||.+||..|+++|++|++||+++++.. .+.+.+.... ..+++.+++++ .+++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~- 130 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSN- 130 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTT-
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHcc-
Confidence 457899999999999999999999999999999998532 2222221000 00345677775 3444
Q ss_pred CCCcEEEEecCCChhHH-HHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCChhhhcCCC-
Q 011394 72 QKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEGARHGP- 145 (487)
Q Consensus 72 ~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pvsgg~~~a~~G~- 145 (487)
||+||+|||+...++ .++.++.+.++++.+|++.+++.+.. ++++.+.. .|.||++ |+. ..+
T Consensus 131 --aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~--~ia~~~~~p~r~iG~Hffn-Pv~-------~m~L 198 (460)
T 3k6j_A 131 --CDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN--EISSVLRDPSNLVGIHFFN-PAN-------VIRL 198 (460)
T ss_dssp --CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH--HHHTTSSSGGGEEEEECCS-STT-------TCCE
T ss_pred --CCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH--HHHHhccCCcceEEEEecc-hhh-------hCCE
Confidence 999999999876655 56688999999999998765555432 33333321 2555555 432 233
Q ss_pred -ccccC--CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Q 011394 146 -SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEEL 222 (487)
Q Consensus 146 -~i~~g--g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i 222 (487)
.++.| .++++++.+.++++.+|+. ++++++ +.|. +.|.+.. ..++|++.++++.| ++++++
T Consensus 199 vEIv~g~~Ts~e~~~~~~~l~~~lGk~-------~v~v~d-~pGf----i~Nril~---~~~~EA~~l~~~~G-a~~e~I 262 (460)
T 3k6j_A 199 VEIIYGSHTSSQAIATAFQACESIKKL-------PVLVGN-CKSF----VFNRLLH---VYFDQSQKLMYEYG-YLPHQI 262 (460)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHTTCE-------EEEESS-CCHH----HHHHHHH---HHHHHHHHHHHTSC-CCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCE-------EEEEec-ccHH----HHHHHHH---HHHHHHHHHHHHcC-CCHHHH
Confidence 35666 3899999999999999976 478886 5554 4455443 45799999998888 999999
Q ss_pred HHHHHh
Q 011394 223 QNVFTE 228 (487)
Q Consensus 223 ~~v~~~ 228 (487)
.+++..
T Consensus 263 D~a~~~ 268 (460)
T 3k6j_A 263 DKIITN 268 (460)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999853
No 60
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.73 E-value=2.2e-17 Score=165.59 Aligned_cols=177 Identities=15% Similarity=0.164 Sum_probs=132.1
Q ss_pred CCCCCCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhh-cCCCcEEEE
Q 011394 1 MVEGKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNS-IQKPRVIIM 79 (487)
Q Consensus 1 ~~~~~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~-l~~advIi~ 79 (487)
|.....++||||||+|.||.+||+.|.++|++|++|||++++.+.+.+.+ +..+.+++++++. .+.+|+||+
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G-------~~~~~~~~e~~~~a~~~aDlVil 74 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEG-------FDVSADLEATLQRAAAEDALIVL 74 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTT-------CCEESCHHHHHHHHHHTTCEEEE
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------CeeeCCHHHHHHhcccCCCEEEE
Confidence 44445678999999999999999999999999999999999888776543 4456788887653 123799999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCCh-hhhc-------CCC-cccc
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGGE-EGAR-------HGP-SLMP 149 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pvsgg~-~~a~-------~G~-~i~~ 149 (487)
|||.. .+..+++++.+. .++.+|+|++++.+...+.+.+.+ .+.+|++ .|++|++ .+.. .|. .+++
T Consensus 75 avP~~-~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~--~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~ilt 150 (341)
T 3ktd_A 75 AVPMT-AIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARN--MQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVT 150 (341)
T ss_dssp CSCHH-HHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTT--CGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEEC
T ss_pred eCCHH-HHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhC--CCCcEecCCccccccccchhhhhhHHhcCCeEEEE
Confidence 99964 788999988886 789999999998866555554433 2568997 6999875 3332 343 4444
Q ss_pred CC---CHH--------HHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHH
Q 011394 150 GG---SFE--------AYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNG 195 (487)
Q Consensus 150 gg---~~~--------~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~ 195 (487)
.+ +++ .++.++++|+.+|++ ++++++...-..+.++...
T Consensus 151 p~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~-------v~~~~~~~HD~~~A~vshl 200 (341)
T 3ktd_A 151 FDQLFDGTDINSTWISIWKDVVQMALAVGAE-------VVPSRVGPHDAAAARVSHL 200 (341)
T ss_dssp CGGGTSSCCCCHHHHHHHHHHHHHHHHTTCE-------EEECCHHHHHHHHHHHTHH
T ss_pred eCCCCChhhhccchHHHHHHHHHHHHHcCCE-------EEEeCHHHHHHHHHHHhHH
Confidence 33 566 899999999999976 4888876666666666544
No 61
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.73 E-value=4.9e-17 Score=152.44 Aligned_cols=179 Identities=12% Similarity=0.105 Sum_probs=136.5
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCC-CCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGD-LPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~-~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
|||+||| +|.||..++..|+++|++|+++||++++.+++.+.....-. ..+. ..+++++++. +|+||+++|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~D~Vi~~~~~~- 75 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEA---CDIAVLTIPWE- 75 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHH---CSEEEECSCHH-
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhc---CCEEEEeCChh-
Confidence 5899999 99999999999999999999999999988877654210000 0133 3577777777 99999999965
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCch------------hHHHHHHHHHHcCCeEEec--CCCCChhhh--cCCC-ccc
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYE------------NTERREKAMAELGLLYLGM--GVSGGEEGA--RHGP-SLM 148 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~------------~~~~~~~~l~~~g~~~i~~--pvsgg~~~a--~~G~-~i~ 148 (487)
.++++++++.+.+ ++.+|+|++++... ..+++.+.+. +.+++.+ |+.+..... ..+. +++
T Consensus 76 ~~~~~~~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 152 (212)
T 1jay_A 76 HAIDTARDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE--SEKVVSALHTIPAARFANLDEKFDWDVP 152 (212)
T ss_dssp HHHHHHHHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT--CSCEEECCTTCCHHHHHCTTCCCCEEEE
T ss_pred hHHHHHHHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC--CCeEEEEccchHHHHhhCcCCCCCccEE
Confidence 6788888887777 59999999986542 2455555543 4678876 665554443 4555 666
Q ss_pred cCCC-HHHHHHHHHHHHHH-hccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHH
Q 011394 149 PGGS-FEAYKYIEDILLKV-AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDM 201 (487)
Q Consensus 149 ~gg~-~~~~~~v~~ll~~i-g~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~ 201 (487)
++|+ ++.++.++++|+.+ |.+ ++++++.+.+.++|++.|.+.+...
T Consensus 153 ~~g~~~~~~~~v~~l~~~~~G~~-------~~~~~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 153 VCGDDDESKKVVMSLISEIDGLR-------PLDAGPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp EEESCHHHHHHHHHHHHHSTTEE-------EEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred EECCcHHHHHHHHHHHHHcCCCC-------ceeccchhHHHHhcchHHHHHHHHH
Confidence 6665 88999999999999 875 5889999999999999998766543
No 62
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.73 E-value=6.6e-16 Score=151.28 Aligned_cols=243 Identities=19% Similarity=0.148 Sum_probs=161.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC---cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF---PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
+|||||||+|+||.+|+..|+++|+ +|++|||++++.+++.+.. ++..+.+..++++. +|+||+|||+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~------gi~~~~~~~~~~~~---aDvVilav~p 73 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC------GVHTTQDNRQGALN---ADVVVLAVKP 73 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT------CCEEESCHHHHHSS---CSEEEECSCG
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc------CCEEeCChHHHHhc---CCeEEEEeCH
Confidence 4789999999999999999999999 9999999999999887642 35677888888887 9999999986
Q ss_pred ChhHHHHHHHHhhc-ccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCChhhhcCCCc-cccC--CCHHHHHH
Q 011394 84 GAPVDETIKTLSAY-MEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGGEEGARHGPS-LMPG--GSFEAYKY 158 (487)
Q Consensus 84 ~~~v~~vl~~l~~~-l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pvsgg~~~a~~G~~-i~~g--g~~~~~~~ 158 (487)
..++++++++.+. ++++++||+.+++.+. ..+.+.+. .+..++. +|.. |.....|.+ ++++ .+++.++.
T Consensus 74 -~~~~~vl~~l~~~~l~~~~iiiS~~agi~~--~~l~~~l~-~~~~vvr~mPn~--p~~v~~g~~~l~~~~~~~~~~~~~ 147 (280)
T 3tri_A 74 -HQIKMVCEELKDILSETKILVISLAVGVTT--PLIEKWLG-KASRIVRAMPNT--PSSVRAGATGLFANETVDKDQKNL 147 (280)
T ss_dssp -GGHHHHHHHHHHHHHTTTCEEEECCTTCCH--HHHHHHHT-CCSSEEEEECCG--GGGGTCEEEEEECCTTSCHHHHHH
T ss_pred -HHHHHHHHHHHhhccCCCeEEEEecCCCCH--HHHHHHcC-CCCeEEEEecCC--hHHhcCccEEEEeCCCCCHHHHHH
Confidence 5899999999998 8888899988777653 34444442 3344553 3421 222223443 3444 36889999
Q ss_pred HHHHHHHHhccCCCCCCeEEEeCCc-h--hhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcch
Q 011394 159 IEDILLKVAAQVPDSGPCVTYVSKG-G--SGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELL 235 (487)
Q Consensus 159 v~~ll~~ig~~~~~~~~~~~~~G~~-G--~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~ 235 (487)
++++|+.+|.. .++.++ - ....+.-..+++.+.++..+.|+ +.+.| +++++..+++...-.|.
T Consensus 148 v~~l~~~iG~~--------~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a---~v~~G-l~~~~a~~l~~~t~~G~-- 213 (280)
T 3tri_A 148 AESIMRAVGLV--------IWVSSEDQIEKIAALSGSGPAYIFLIMEALQEA---AEQLG-LTKETAELLTEQTVLGA-- 213 (280)
T ss_dssp HHHHHGGGEEE--------EECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHCCCe--------EEECCHHHhhHHHHHhccHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHHHHHHHH--
Confidence 99999999963 555431 1 11111112245667777777777 56788 99999988874322221
Q ss_pred hhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHH
Q 011394 236 SFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIA 289 (487)
Q Consensus 236 s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~ 289 (487)
..++...+ ..|.-+.+.+ ....||-.-.++...+.|+...++.
T Consensus 214 -------a~~~~~~~-~~p~~l~~~v---~spgGtT~~~l~~le~~g~~~~~~~ 256 (280)
T 3tri_A 214 -------ARMALETE-QSVVQLRQFV---TSPGGTTEQAIKVLESGNLRELFIK 256 (280)
T ss_dssp -------HHHHHTCS-SCHHHHHHHH---CCTTSHHHHHHHHHHTTCHHHHHHH
T ss_pred -------HHHHHhcC-CCHHHHHHhc---cCCChHHHHHHHHHHHCChHHHHHH
Confidence 12222211 2233233333 2334566556666677788755443
No 63
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.73 E-value=3.9e-17 Score=171.36 Aligned_cols=189 Identities=14% Similarity=0.202 Sum_probs=138.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-------hcCCC----------CccccCCHHHHHh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------KEGDL----------PLFGFRDPESFVN 69 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------~~g~~----------~~~~~~s~~e~~~ 69 (487)
++||||||+|.||.+||.+|+++|++|++||+++++++.+.+... ..|.. +++.++++++ ++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHA-LA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGG-GG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHH-hc
Confidence 568999999999999999999999999999999999887764210 00000 2445667754 45
Q ss_pred hcCCCcEEEEecCCChhHH-HHHHHHhhcccCCCEEE-ecCCCCchhHHHHHHHHH----HcCCeEEe-cCCCCChhhhc
Q 011394 70 SIQKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCII-DGGNEWYENTERREKAMA----ELGLLYLG-MGVSGGEEGAR 142 (487)
Q Consensus 70 ~l~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiI-d~st~~~~~~~~~~~~l~----~~g~~~i~-~pvsgg~~~a~ 142 (487)
+ +|+||+|||+..+++ .++.++.+.++++.+|+ ++|+..+. ++++.+. -.|.||++ +|++
T Consensus 84 ~---aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~---~ia~~~~~p~~~ig~hf~~Pa~v~------- 150 (483)
T 3mog_A 84 A---ADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISIT---AIAAEIKNPERVAGLHFFNPAPVM------- 150 (483)
T ss_dssp G---CSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH---HHTTTSSSGGGEEEEEECSSTTTC-------
T ss_pred C---CCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHH---HHHHHccCccceEEeeecChhhhC-------
Confidence 4 999999999986664 67788988899999985 46665432 2333221 12566665 3443
Q ss_pred CCC-ccccCC---CHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 011394 143 HGP-SLMPGG---SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLT 218 (487)
Q Consensus 143 ~G~-~i~~gg---~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~ 218 (487)
+ ..+++| ++++++.+.++++.+|+. ++++++. .| +++||.+.. .++|++.++++.+ .|
T Consensus 151 --~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~-------~v~v~d~-~G---fi~Nr~l~~----~~~Ea~~l~~~g~-~~ 212 (483)
T 3mog_A 151 --KLVEVVSGLATAAEVVEQLCELTLSWGKQ-------PVRCHST-PG---FIVNRVARP----YYSEAWRALEEQV-AA 212 (483)
T ss_dssp --CEEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEEESC-TT---TTHHHHTHH----HHHHHHHHHHTTC-SC
T ss_pred --CeEEEecCCCCCHHHHHHHHHHHHHhCCE-------EEEEecc-Cc---chHHHHHHH----HHHHHHHHHHhCC-CC
Confidence 3 445555 899999999999999976 4788763 24 566665433 6799999999988 99
Q ss_pred HHHHHHHHH
Q 011394 219 NEELQNVFT 227 (487)
Q Consensus 219 ~~~i~~v~~ 227 (487)
++++.+++.
T Consensus 213 ~~~id~a~~ 221 (483)
T 3mog_A 213 PEVIDAALR 221 (483)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999985
No 64
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.73 E-value=3e-17 Score=159.04 Aligned_cols=184 Identities=17% Similarity=0.198 Sum_probs=132.3
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCC----CcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKG----FPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G----~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
++|||+|||+|.||..+|.+|+++| ++|++|||++++ . ++..+.+++++++. +|+||+||
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~-------g~~~~~~~~~~~~~---~D~vi~~v 66 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------T-------TLNYMSSNEELARH---CDIIVCAV 66 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------S-------SSEECSCHHHHHHH---CSEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------C-------ceEEeCCHHHHHhc---CCEEEEEe
Confidence 4579999999999999999999999 799999999876 1 25567788888887 99999999
Q ss_pred CCChhHHHHHHHHhhcccCCCE-EEecCCCCchhHHHHHHHHHHc--CCeEE-ecCCCCChhhhcCCCccccCC---CHH
Q 011394 82 KAGAPVDETIKTLSAYMEKGDC-IIDGGNEWYENTERREKAMAEL--GLLYL-GMGVSGGEEGARHGPSLMPGG---SFE 154 (487)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~i-iId~st~~~~~~~~~~~~l~~~--g~~~i-~~pvsgg~~~a~~G~~i~~gg---~~~ 154 (487)
|+ .++++++.++.+.+ ++.+ |.++++..+. .+.+.+... .++++ +.|+.++ .|.++++++ +++
T Consensus 67 ~~-~~~~~v~~~l~~~l-~~~~vv~~~~gi~~~---~l~~~~~~~~~~v~~~p~~p~~~~-----~g~~~~~~~~~~~~~ 136 (262)
T 2rcy_A 67 KP-DIAGSVLNNIKPYL-SSKLLISICGGLNIG---KLEEMVGSENKIVWVMPNTPCLVG-----EGSFIYCSNKNVNST 136 (262)
T ss_dssp CT-TTHHHHHHHSGGGC-TTCEEEECCSSCCHH---HHHHHHCTTSEEEEEECCGGGGGT-----CEEEEEEECTTCCHH
T ss_pred CH-HHHHHHHHHHHHhc-CCCEEEEECCCCCHH---HHHHHhCCCCcEEEECCChHHHHc-----CCeEEEEeCCCCCHH
Confidence 96 48999999998888 4554 4455555442 233333221 13343 2233322 455444444 788
Q ss_pred HHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhH--HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011394 155 AYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMI--HNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFT 227 (487)
Q Consensus 155 ~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v--~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~~ 227 (487)
.++.++++|+.+|. ++++++......+++. .|.+.+.++..+.|+ +.+.| +++++..+++.
T Consensus 137 ~~~~~~~ll~~~G~--------~~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~~~G-l~~~~~~~~~~ 199 (262)
T 2rcy_A 137 DKKYVNDIFNSCGI--------IHEIKEKDMDIATAISGCGPAYVYLFIESLIDA---GVKNG-LSRELSKNLVL 199 (262)
T ss_dssp HHHHHHHHHHTSEE--------EEECCGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--------EEEeCHHHccHHHHHHccHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH
Confidence 99999999999985 3788876555556553 466666777666666 57788 99988888764
No 65
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.72 E-value=2.5e-17 Score=166.72 Aligned_cols=277 Identities=15% Similarity=0.113 Sum_probs=161.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc--C-C----CCc-cccCCHHHHHhhcCCCcEEE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE--G-D----LPL-FGFRDPESFVNSIQKPRVII 78 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~--g-~----~~~-~~~~s~~e~~~~l~~advIi 78 (487)
+|||+|||+|.||..+|..|+++|++|++|||++++++.+.+.+... + . .++ ..+++++++++. +|+||
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~D~vi 80 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD---ADVIL 80 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT---CSEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhc---CCEEE
Confidence 47999999999999999999999999999999999998887653100 0 0 011 245688887766 99999
Q ss_pred EecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcC---CeEEe---cCCCCChhh---hc----CCC
Q 011394 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELG---LLYLG---MGVSGGEEG---AR----HGP 145 (487)
Q Consensus 79 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g---~~~i~---~pvsgg~~~---a~----~G~ 145 (487)
+|+|+. ..+++++++.+.+.++++||++.+..+ .+.++.+.+.+.+ +.|++ .|+++...+ +. .+.
T Consensus 81 ~~v~~~-~~~~~~~~l~~~l~~~~~vv~~~~~~~-~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~gpg~v~~~~~~~~ 158 (359)
T 1bg6_A 81 IVVPAI-HHASIAANIASYISEGQLIILNPGATG-GALEFRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIKGA 158 (359)
T ss_dssp ECSCGG-GHHHHHHHHGGGCCTTCEEEESSCCSS-HHHHHHHHHHHTTCCCCEEEEESSCSEEEECSSTTEEEEEEECSC
T ss_pred EeCCch-HHHHHHHHHHHhCCCCCEEEEcCCCch-HHHHHHHHHHhcCCCCeEEEEecCCcEEEEeCCCCEEEEEEeecc
Confidence 999987 578899999999999999999855333 3344555566554 45655 455443221 11 011
Q ss_pred ccc---c-CCCHHHHHHHHHHHHHHhccCCCCC-----C---eEEEeCCc--hhhHHHH---hH------HHHHHHHHHH
Q 011394 146 SLM---P-GGSFEAYKYIEDILLKVAAQVPDSG-----P---CVTYVSKG--GSGNFVK---MI------HNGIEYGDMQ 202 (487)
Q Consensus 146 ~i~---~-gg~~~~~~~v~~ll~~ig~~~~~~~-----~---~~~~~G~~--G~g~~~K---~v------~N~~~~~~~~ 202 (487)
..+ . +++++.++.++++|..+... ... . ++++.+.. +.+...| +. .+.......+
T Consensus 159 ~~~g~~~~~~~~~~~~~l~~~~~~~~~~--~di~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (359)
T 1bg6_A 159 MDFACLPAAKAGWALEQIGSVLPQYVAV--ENVLHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEGITPSVGSLAEK 236 (359)
T ss_dssp EEEEEESGGGHHHHHHHHTTTCTTEEEC--SCHHHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHHHCCHHHHHHHHH
T ss_pred eEEEeccccccHHHHHHHHHHhhhcEEc--CChHhhhccCCCccccHHHHHhhhchhhcCCccchhhcCCCHHHHHHHHH
Confidence 111 1 34555677777777544210 000 0 01111110 3333222 11 2334567888
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchh-hhHhhhccccccccCCCCchhHH--hhhhccCCCCchHHHHHHHH
Q 011394 203 LIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLS-FLIEITADIFGIKDDKGDGYLVD--KVLDKTGMKGTGKWTVQQAA 279 (487)
Q Consensus 203 ~~~Ea~~l~~~~g~i~~~~i~~v~~~~~~~~~~s-~~~~~~~~~l~~~~~~~~~~~l~--~i~~~~~~kgtg~~~~~~a~ 279 (487)
++.|++.++++.| ++++++.+.+.........+ +.......++. |...+ ..++ .+.+|+. -+.| ..++.|+
T Consensus 237 ~~~E~~~va~a~G-~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~--d~~~~-~e~~~~~~~~D~~-~~~g-~~~~~a~ 310 (359)
T 1bg6_A 237 VDAERIAIAKAFD-LNVPSVCEWYKESYGQSPATIYEAVQGNPAYR--GIAGP-INLNTRYFFEDVS-TGLV-PLSELGR 310 (359)
T ss_dssp HHHHHHHHHHTTT-CCCCCHHHHC-------CCSHHHHHHTCGGGT--TCBCC-SSSCCHHHHHHHH-TTHH-HHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCcHHHHHHHHhCCCcccHHHHHhcchhhc--CCCCC-CCCCccceecCcC-ccHH-HHHHHHH
Confidence 9999999999999 99876666553211111010 00000112211 11111 1223 4444431 0123 6889999
Q ss_pred HcCCCchhHHHHHHHHHh
Q 011394 280 DLSVAAPTIASSLDARFL 297 (487)
Q Consensus 280 ~~gv~~P~~~~a~~~r~~ 297 (487)
++|+|+|+.... ...+.
T Consensus 311 ~~gv~~P~~~~l-~~~~~ 327 (359)
T 1bg6_A 311 AVNVPTPLIDAV-LDLIS 327 (359)
T ss_dssp HTTCCCHHHHHH-HHHHH
T ss_pred HcCCCchHHHHH-HHHHH
Confidence 999999998764 44443
No 66
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.72 E-value=2.3e-16 Score=156.26 Aligned_cols=193 Identities=13% Similarity=0.198 Sum_probs=135.3
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-------hcCC---------------CCccccCC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------KEGD---------------LPLFGFRD 63 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------~~g~---------------~~~~~~~s 63 (487)
.|+||+|||+|.||.+||..|+++|++|++||+++++++.+.+... ..|. .+++.+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 93 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTD 93 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecC
Confidence 3578999999999999999999999999999999998876532110 0000 02455678
Q ss_pred HHHHHhhcCCCcEEEEecCCChhH-HHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHH----HcCCeEEecCCCCCh
Q 011394 64 PESFVNSIQKPRVIIMLVKAGAPV-DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMA----ELGLLYLGMGVSGGE 138 (487)
Q Consensus 64 ~~e~~~~l~~advIi~~vp~~~~v-~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~----~~g~~~i~~pvsgg~ 138 (487)
+++.+++ +|+||+|||+..++ +.++.++.+.+.++.+|++.+++.+.. ++.+.+. -.|.||++ |+.
T Consensus 94 ~~~~~~~---aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~--~l~~~~~~~~~~~g~h~~~-P~~--- 164 (302)
T 1f0y_A 94 AASVVHS---TDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT--SIANATTRQDRFAGLHFFN-PVP--- 164 (302)
T ss_dssp HHHHTTS---CSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH--HHHTTSSCGGGEEEEEECS-STT---
T ss_pred HHHhhcC---CCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH--HHHHhcCCcccEEEEecCC-Ccc---
Confidence 8777666 99999999987554 466688888888899988766555432 3333221 11344443 221
Q ss_pred hhhcCCC--ccccC--CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Q 011394 139 EGARHGP--SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV 214 (487)
Q Consensus 139 ~~a~~G~--~i~~g--g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~ 214 (487)
.++ .++.| .+++.++.+.++++.+|.. ++++++. .| ++++|.+ ..+++|++.++++.
T Consensus 165 ----~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~-------~v~~~~~-~g---~i~nr~l----~~~~~Ea~~l~~~g 225 (302)
T 1f0y_A 165 ----VMKLVEVIKTPMTSQKTFESLVDFSKALGKH-------PVSCKDT-PG---FIVNRLL----VPYLMEAIRLYERG 225 (302)
T ss_dssp ----TCCEEEEECCTTCCHHHHHHHHHHHHHTTCE-------EEEECSC-TT---TTHHHHH----HHHHHHHHHHHHTT
T ss_pred ----cCceEEEeCCCCCCHHHHHHHHHHHHHcCCc-------eEEecCc-cc---ccHHHHH----HHHHHHHHHHHHcC
Confidence 233 34544 3899999999999999965 4777652 33 3455443 35689999999998
Q ss_pred CCCCHHHHHHHHH
Q 011394 215 GKLTNEELQNVFT 227 (487)
Q Consensus 215 g~i~~~~i~~v~~ 227 (487)
+ ++++++..++.
T Consensus 226 ~-~~~~~id~~~~ 237 (302)
T 1f0y_A 226 D-ASKEDIDTAMK 237 (302)
T ss_dssp S-SCHHHHHHHHH
T ss_pred C-CCHHHHHHHHH
Confidence 8 99999988873
No 67
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.70 E-value=3.2e-16 Score=153.18 Aligned_cols=178 Identities=16% Similarity=0.187 Sum_probs=133.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
|||+|||+|.||..++..|.+.|++|++|||++++.+.+.+.+. ....+.+++++ .. +|+||+|+|+. .+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~-~~---~D~vi~av~~~-~~ 70 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL-----VDEAGQDLSLL-QT---AKIIFLCTPIQ-LI 70 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS-----CSEEESCGGGG-TT---CSEEEECSCHH-HH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCC-----CccccCCHHHh-CC---CCEEEEECCHH-HH
Confidence 58999999999999999999999999999999999888765332 11245677777 65 99999999975 78
Q ss_pred HHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec-CCCCC----hhhhc----CCC-cccc---CCCHH
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM-GVSGG----EEGAR----HGP-SLMP---GGSFE 154 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~-pvsgg----~~~a~----~G~-~i~~---gg~~~ 154 (487)
.++++++.+.+.++.+|+++++..+...+.+.+.+ .++++. |++|+ +..+. .|. +++. +++++
T Consensus 71 ~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~----~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~ 146 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLW----SGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPE 146 (279)
T ss_dssp HHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHS----TTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHH
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHh----CCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHH
Confidence 89999999999999999999887765544333322 256665 77754 33222 344 3332 35889
Q ss_pred HHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHH
Q 011394 155 AYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEA 207 (487)
Q Consensus 155 ~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea 207 (487)
..+.++++|+.+|.+ ++++++......+|++.|.-.+... .+.++
T Consensus 147 ~~~~v~~l~~~~g~~-------~~~~~~~~~~~~~~~~~~~p~~i~~-al~~~ 191 (279)
T 2f1k_A 147 QLACLRSVLEPLGVK-------IYLCTPADHDQAVAWISHLPVMVSA-ALIQA 191 (279)
T ss_dssp HHHHHHHHHGGGTCE-------EEECCHHHHHHHHHHHTHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHcCCE-------EEEcCHHHHHHHHHHHhhHHHHHHH-HHHHH
Confidence 999999999999965 4788888889999999997554444 33444
No 68
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.69 E-value=1.9e-16 Score=155.82 Aligned_cols=160 Identities=24% Similarity=0.297 Sum_probs=122.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
+|||||||+|.||..+|..|.++ |++|++|||++++.+.+.+.+.. ...+.+++++++. +|+||+|||+.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~---aDvVilavp~~ 77 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIV-----DEATADFKVFAAL---ADVIILAVPIK 77 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSC-----SEEESCTTTTGGG---CSEEEECSCHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCc-----ccccCCHHHhhcC---CCEEEEcCCHH
Confidence 57999999999999999999988 68999999999998887654320 1345677777776 99999999986
Q ss_pred hhHHHHHHHHhhc-ccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCC----Chhhhc----CCC-ccc---cC
Q 011394 85 APVDETIKTLSAY-MEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSG----GEEGAR----HGP-SLM---PG 150 (487)
Q Consensus 85 ~~v~~vl~~l~~~-l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pvsg----g~~~a~----~G~-~i~---~g 150 (487)
.++++++++.+. +.++.+|+|++++.+..++.+.+.+..++++|++ .|++| ++..+. .|. .++ .+
T Consensus 78 -~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~ 156 (290)
T 3b1f_A 78 -KTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCL 156 (290)
T ss_dssp -HHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTT
T ss_pred -HHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCC
Confidence 568899999888 8999999999988776665665555444788887 58876 443333 455 332 35
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCC
Q 011394 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSK 182 (487)
Q Consensus 151 g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~ 182 (487)
++++.++.++++|+.+|.+ ++++++
T Consensus 157 ~~~~~~~~v~~l~~~~G~~-------~~~~~~ 181 (290)
T 3b1f_A 157 TKPNTIPALQDLLSGLHAR-------YVEIDA 181 (290)
T ss_dssp CCTTHHHHHHHHTGGGCCE-------EEECCH
T ss_pred CCHHHHHHHHHHHHHcCCE-------EEEcCH
Confidence 7888999999999999975 466664
No 69
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.48 E-value=5.2e-18 Score=158.04 Aligned_cols=158 Identities=18% Similarity=0.181 Sum_probs=114.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.|+|+|||+|.||..+|.+|.+.|++|++|||+++ .+.+...+ +... +++++++. +|+||++||+. +
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g-------~~~~-~~~~~~~~---aDvVilav~~~-~ 85 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRG-------AEVL-CYSEAASR---SDVIVLAVHRE-H 85 (201)
Confidence 46899999999999999999999999999999987 44444322 3334 67777766 99999999985 6
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC--------------hhhhcCCC--ccccC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG--------------EEGARHGP--SLMPG 150 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg--------------~~~a~~G~--~i~~g 150 (487)
++.++ ++.+ +.++++|||++++.+... +...+..+++.++.++ ..+...|. .+++|
T Consensus 86 ~~~v~-~l~~-~~~~~ivI~~~~G~~~~~------~~~~~~~~l~~~~~~~~vvra~~n~~a~~~~~g~l~g~~~~~~~g 157 (201)
T 2yjz_A 86 YDFLA-ELAD-SLKGRVLIDVSNNQKMNQ------YPESNAEYLAQLVPGAHVVKAFNTISAWALQSGTLDASRQVFVCG 157 (201)
Confidence 77776 4544 347899999999986422 1111222222222221 11222222 57788
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhH
Q 011394 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMI 192 (487)
Q Consensus 151 g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v 192 (487)
++++.++.++++|+.+|.+ ++++|+.|.|..+|.+
T Consensus 158 ~~~~~~~~v~~ll~~~G~~-------~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 158 NDSKAKDRVMDIARTLGLT-------PLDQGSLVAAKEIENY 192 (201)
Confidence 8999999999999999987 4899999999998865
No 70
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.66 E-value=9.8e-17 Score=151.61 Aligned_cols=161 Identities=14% Similarity=0.192 Sum_probs=117.7
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEE-EeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISV-YNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v-~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
+||||+|||+|+||..+|..|+++|++|++ |||++++++++.+... +....+..+.++. +|+||+++|+.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g------~~~~~~~~~~~~~---aDvVilavp~~ 92 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFG------ASVKAVELKDALQ---ADVVILAVPYD 92 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHT------TTEEECCHHHHTT---SSEEEEESCGG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhC------CCcccChHHHHhc---CCEEEEeCChH
Confidence 468999999999999999999999999999 9999999988876532 2334455555665 99999999964
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCCCc------h------hHHHHHHHHHHcCCeEE------ecCCCC-ChhhhcCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNEWY------E------NTERREKAMAELGLLYL------GMGVSG-GEEGARHGP 145 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~------~------~~~~~~~~l~~~g~~~i------~~pvsg-g~~~a~~G~ 145 (487)
.+.+++.++.+ + ++++||++++..+ . ..+.+.+.+. +..++ .+++.. ++. ...++
T Consensus 93 -~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~~v~~~g~~-~~~~~ 166 (220)
T 4huj_A 93 -SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP--GAKVVKAFNTLPAAVLAADPD-KGTGS 166 (220)
T ss_dssp -GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST--TCEEEEESCSSCHHHHTSCSB-CSSCE
T ss_pred -HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC--CCCEEECCCCCCHHHhhhCcc-cCCCC
Confidence 78888888776 4 6899999998773 1 3444555443 23333 223332 222 12233
Q ss_pred --ccccCCCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHH
Q 011394 146 --SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNF 188 (487)
Q Consensus 146 --~i~~gg~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~ 188 (487)
.++.|.++++.+.++++|+.+|.. ++++|+.+.|..
T Consensus 167 ~~v~~~g~~~~~~~~v~~l~~~~G~~-------~~~~G~l~~a~~ 204 (220)
T 4huj_A 167 RVLFLSGNHSDANRQVAELISSLGFA-------PVDLGTLAASGP 204 (220)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHTTCE-------EEECCSHHHHHH
T ss_pred eeEEEeCCCHHHHHHHHHHHHHhCCC-------eEeeCChhhcch
Confidence 345567889999999999999976 589999777754
No 71
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.66 E-value=2.1e-15 Score=150.53 Aligned_cols=249 Identities=14% Similarity=0.185 Sum_probs=160.0
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcC--C----CCccccCCHHHHHhhcCCCcEEEE
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEG--D----LPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g--~----~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
.+|||+|||+|.||..+|..|+++|++|++| +++++++.+.+.+.... + .++..++++++ +.. +|+||+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~---~D~vil 92 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQG---ADLVLF 92 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTT---CSEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCC---CCEEEE
Confidence 3579999999999999999999999999999 99999988877542110 0 02334456654 344 999999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHc---CCeEEecCCCCChhhhcC-CC-ccccCCCHH
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL---GLLYLGMGVSGGEEGARH-GP-SLMPGGSFE 154 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~---g~~~i~~pvsgg~~~a~~-G~-~i~~gg~~~ 154 (487)
+||+. +++++++.+.+.+.++++||.++++.... +.+.+.+..+ ++.+..+-.+| |..+.+ +. .+.+|. .+
T Consensus 93 avk~~-~~~~~l~~l~~~l~~~~~iv~~~nGi~~~-~~l~~~~~~~vl~g~~~~~a~~~g-P~~~~~~~~g~~~ig~-~~ 168 (318)
T 3hwr_A 93 CVKST-DTQSAALAMKPALAKSALVLSLQNGVENA-DTLRSLLEQEVAAAVVYVATEMAG-PGHVRHHGRGELVIEP-TS 168 (318)
T ss_dssp CCCGG-GHHHHHHHHTTTSCTTCEEEEECSSSSHH-HHHHHHCCSEEEEEEEEEEEEEEE-TTEEEEEEEEEEEECC-CT
T ss_pred Ecccc-cHHHHHHHHHHhcCCCCEEEEeCCCCCcH-HHHHHHcCCcEEEEEEEEeEEEcC-CeEEEEcCCceEEEcC-CH
Confidence 99986 89999999999999999999999987442 2344433200 11111121221 111211 22 233444 34
Q ss_pred HHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHH---------------------HHHHHHHHHHHHHHHHH
Q 011394 155 AYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI---------------------EYGDMQLIAEAYDVLKS 213 (487)
Q Consensus 155 ~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~---------------------~~~~~~~~~Ea~~l~~~ 213 (487)
..+.+.++|..-+.+ +....+.-...+.|++-|.. ...+..++.|+..++++
T Consensus 169 ~~~~l~~~l~~~~~~-------~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a 241 (318)
T 3hwr_A 169 HGANLAAIFAAAGVP-------VETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARA 241 (318)
T ss_dssp TTHHHHHHHHHTTCC-------EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC-------cEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHH
Confidence 557788888876654 34445577788899887743 23456788999999999
Q ss_pred hCCCCHH-----HHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhH
Q 011394 214 VGKLTNE-----ELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (487)
Q Consensus 214 ~g~i~~~-----~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~ 288 (487)
.| ++.+ .+.+++... . ....++..++...+. ..+|.+.. +.++.|+++|+|+|+.
T Consensus 242 ~G-~~l~~~~~~~~~~~~~~~--~---~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~tP~~ 301 (318)
T 3hwr_A 242 EG-VKLPDDVALAIRRIAETM--P---RQSSSTAQDLARGKR-----SEIDHLNG---------LIVRRGDALGIPVPAN 301 (318)
T ss_dssp TT-CCCCTTHHHHHHHHHHHS--T---TCCCHHHHHHHTTCC-----CSGGGTHH---------HHHHHHHHTTCCCHHH
T ss_pred cC-CCCChHHHHHHHHHHHhc--C---CCCcHHHHHHHcCCh-----hHHHHHHH---------HHHHHHHHhCCCCcHH
Confidence 98 7732 222222211 1 112233334433321 25666654 5789999999999997
Q ss_pred HH
Q 011394 289 AS 290 (487)
Q Consensus 289 ~~ 290 (487)
..
T Consensus 302 ~~ 303 (318)
T 3hwr_A 302 RV 303 (318)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 72
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.65 E-value=7.9e-17 Score=157.56 Aligned_cols=183 Identities=9% Similarity=0.057 Sum_probs=123.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
||||||||+|.||..|+..|+++ ++| .+|||++++.+++.+.. +. .+.++++++++ +|+||+|||+.
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~------g~-~~~~~~~~~~~---~DvVilav~~~- 69 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVY------GG-KAATLEKHPEL---NGVVFVIVPDR- 69 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHT------CC-CCCSSCCCCC------CEEECSCTT-
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHc------CC-ccCCHHHHHhc---CCEEEEeCChH-
Confidence 47999999999999999999998 999 59999999988876543 13 45667766655 99999999987
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhc--CCCccccCCCHHHHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGAR--HGPSLMPGGSFEAYKYIEDIL 163 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~--~G~~i~~gg~~~~~~~v~~ll 163 (487)
.+.+++.++. .++++||++|++.+....+.. ..+..+..+++++++.... .+..++++++++.++.++++|
T Consensus 70 ~~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~----~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 142 (276)
T 2i76_A 70 YIKTVANHLN---LGDAVLVHCSGFLSSEIFKKS----GRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIA 142 (276)
T ss_dssp THHHHHTTTC---CSSCCEEECCSSSCGGGGCSS----SEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHH
T ss_pred HHHHHHHHhc---cCCCEEEECCCCCcHHHHHHh----hccccchhhhcCCCchhHHHhCCCeEEEEeChHHHHHHHHHH
Confidence 5777776654 578999999987765432211 1111223446666554433 333566777888899999999
Q ss_pred HHHhccCCCCCCeEEEeCCchh---hHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHH
Q 011394 164 LKVAAQVPDSGPCVTYVSKGGS---GNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNE 220 (487)
Q Consensus 164 ~~ig~~~~~~~~~~~~~G~~G~---g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~ 220 (487)
+.+|.+ ++++++.+. ....+++.|.+. .++.|+..++.+.| ++.+
T Consensus 143 ~~lG~~-------~~~v~~~~~~~~~~~~~l~~n~~~----~~~~~a~~~~~~~G-l~~~ 190 (276)
T 2i76_A 143 EEISGK-------YFVIPSEKKKAYHLAAVIASNFPV----ALAYLSKRIYTLLG-LDEP 190 (276)
T ss_dssp HHHCSC-------EEECCGGGHHHHHHHHHHHHTTHH----HHHHHHHHHHHTTT-CSCH
T ss_pred HHhCCC-------EEEECHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcC-CChH
Confidence 999965 588876442 233467777543 35677778888888 9987
No 73
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.64 E-value=9.7e-16 Score=154.02 Aligned_cols=249 Identities=20% Similarity=0.251 Sum_probs=156.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc---C---CCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE---G---DLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~---g---~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
+|||+|||+|.||..+|..|+++|++|++|+|+ ++.+.+.+.+... + ..++..+++++++ .. +|+||+|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~---~D~Vila 77 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAAL-GE---QDVVIVA 77 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHH-CC---CSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-CC---CCEEEEe
Confidence 579999999999999999999999999999996 6677766543210 0 0012345677664 44 9999999
Q ss_pred cCCChhHHHHHHHHhhcccCCCEEEecCCCCc------------------hhHHHHHHHHHHcCCeEEe------cCCCC
Q 011394 81 VKAGAPVDETIKTLSAYMEKGDCIIDGGNEWY------------------ENTERREKAMAELGLLYLG------MGVSG 136 (487)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~------------------~~~~~~~~~l~~~g~~~i~------~pvsg 136 (487)
||+. +++++++.+.+.+.++++||.+.|+.+ ...+.+.+.+... +++. +-..+
T Consensus 78 vk~~-~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~--~v~~gv~~~~a~~~~ 154 (335)
T 3ghy_A 78 VKAP-ALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTR--HVLGCVVHLTCATVS 154 (335)
T ss_dssp CCHH-HHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGG--GEEEEEECCCEEESS
T ss_pred CCch-hHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcc--cEEEEEEEEEEEEcC
Confidence 9985 789999999999999999999999853 1112333333221 2222 11111
Q ss_pred Chhhhc-CCC-ccccC----CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHH---------------
Q 011394 137 GEEGAR-HGP-SLMPG----GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNG--------------- 195 (487)
Q Consensus 137 g~~~a~-~G~-~i~~g----g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~--------------- 195 (487)
+..+. .+. .+..| .+.+..+.+.++|+.-+.+ +....+.-...+.|++.|+
T Consensus 155 -pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~-------~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~ 226 (335)
T 3ghy_A 155 -PGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQ-------AECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDR 226 (335)
T ss_dssp -TTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCE-------EEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHH
T ss_pred -CcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCC-------cEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHH
Confidence 11111 222 23333 3456778888888887654 3444455666677765442
Q ss_pred ------HHHHHHHHHHHHHHHHHHhCCCCHH----HHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhcc
Q 011394 196 ------IEYGDMQLIAEAYDVLKSVGKLTNE----ELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKT 265 (487)
Q Consensus 196 ------~~~~~~~~~~Ea~~l~~~~g~i~~~----~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~ 265 (487)
....+..++.|+..++++.| ++++ ++.++++.. +. ...++..++...+. ...+|.+..
T Consensus 227 ~~~~~~~~~l~~~~~~E~~~va~a~G-~~~~~~~~~~~~~~~~~--~~---~~sSM~qD~~~gr~----~tEid~i~G-- 294 (335)
T 3ghy_A 227 ILDDPLVSAFCLAVMAEAKAIGARIG-CPIEQSGEARSAVTRQL--GA---FKTSMLQDAEAGRG----PLEIDALVA-- 294 (335)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHTTT-CCCCSCHHHHHHHHHTT--CS---CCCTTTC-----CC----CCCHHHHTH--
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHcC-CCCCccHHHHHHHHhcc--CC---CCcHHHHHHHcCCC----CchHHHHhh--
Confidence 34567789999999999998 7642 233332211 11 11123334333220 135777765
Q ss_pred CCCCchHHHHHHHHHcCCCchhHHH
Q 011394 266 GMKGTGKWTVQQAADLSVAAPTIAS 290 (487)
Q Consensus 266 ~~kgtg~~~~~~a~~~gv~~P~~~~ 290 (487)
..++.|+++|+|+|+...
T Consensus 295 -------~vv~~a~~~gv~~P~~~~ 312 (335)
T 3ghy_A 295 -------SVREIGLHVGVPTPQIDT 312 (335)
T ss_dssp -------HHHHHHHHHTCCCHHHHH
T ss_pred -------HHHHHHHHhCCCCCHHHH
Confidence 578999999999999765
No 74
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.64 E-value=3.9e-15 Score=147.16 Aligned_cols=180 Identities=17% Similarity=0.194 Sum_probs=134.0
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
+++|+||| +|.||.++|..|++.|++|++|||+++. ++.++++. +|+||+|||..
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~---aDvVilavp~~- 76 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILAN---ADVVIVSVPIN- 76 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTT---CSEEEECSCGG-
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcC---CCEEEEeCCHH-
Confidence 45899999 9999999999999999999999998642 24455565 99999999986
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec-CCCCChhhhcCCC-cccc-CCCHHHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM-GVSGGEEGARHGP-SLMP-GGSFEAYKYIEDI 162 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~-pvsgg~~~a~~G~-~i~~-gg~~~~~~~v~~l 162 (487)
.+.++++++.+.+.++.+|+|++++.....+.+.+. .+.+|++. |++|.+.....|. ++++ +.+++.++.++++
T Consensus 77 ~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~---~~~~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~~v~~l 153 (298)
T 2pv7_A 77 LTLETIERLKPYLTENMLLADLTSVKREPLAKMLEV---HTGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQ 153 (298)
T ss_dssp GHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHH---CSSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHh---cCCCEEeeCCCCCCCchhhcCCeEEEecCCCHHHHHHHHHH
Confidence 699999999999999999999988875544443332 34678865 8888765555676 4443 4478889999999
Q ss_pred HHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011394 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNV 225 (487)
Q Consensus 163 l~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v 225 (487)
|+.+|.+ ++++++......++++.+.-.+.... +.+++ .+.| ++.++...+
T Consensus 154 ~~~~G~~-------~~~~~~~~~d~~~a~~~~~p~~~a~~-l~~~l---~~~g-~~~~~~~~l 204 (298)
T 2pv7_A 154 IQIWGAK-------IYQTNATEHDHNMTYIQALRHFSTFA-NGLHL---SKQP-INLANLLAL 204 (298)
T ss_dssp HHHTTCE-------EEECCHHHHHHHHHHHTHHHHHHHHH-HHHHH---TTSS-CCHHHHHHT
T ss_pred HHHcCCE-------EEECCHHHHHHHHHHHHHHHHHHHHH-HHHHH---HhcC-CCHHHHHhh
Confidence 9999975 47777766677788887765443332 33332 2356 887765543
No 75
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.63 E-value=1.2e-15 Score=167.39 Aligned_cols=190 Identities=14% Similarity=0.206 Sum_probs=133.8
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhh-------hhcCCC----------CccccCCHHHHH
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERA-------KKEGDL----------PLFGFRDPESFV 68 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~-------~~~g~~----------~~~~~~s~~e~~ 68 (487)
.++||||||+|.||.+||.+|+++||+|++||+++++++...... ...|.. +++.++++ +.+
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 391 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDF 391 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTG
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHH
Confidence 357899999999999999999999999999999999877642210 000000 13456666 445
Q ss_pred hhcCCCcEEEEecCCChhHH-HHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCChhhhcC
Q 011394 69 NSIQKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEGARH 143 (487)
Q Consensus 69 ~~l~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pvsgg~~~a~~ 143 (487)
++ ||+||+|||++.+++ .++.++.+.++++.+|++.+++.+.. ++++.+.. .|.||++ |+. .
T Consensus 392 ~~---aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~--~la~~~~~~~~~ig~hf~~-P~~-------~ 458 (715)
T 1wdk_A 392 GN---VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISIS--LLAKALKRPENFVGMHFFN-PVH-------M 458 (715)
T ss_dssp GG---CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH--HHGGGCSCGGGEEEEECCS-STT-------T
T ss_pred CC---CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHH--HHHHHhcCccceEEEEccC-Ccc-------c
Confidence 55 999999999886665 45678888899999998766555433 23332211 2455554 332 2
Q ss_pred CC--ccccCC--CHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCH
Q 011394 144 GP--SLMPGG--SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTN 219 (487)
Q Consensus 144 G~--~i~~gg--~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~ 219 (487)
++ .++.|. ++++++.+.++++.+|+. ++++++. .|. +.|.+.. ..++|++.++++ | +|+
T Consensus 459 ~~lvevv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~d~-~Gf----i~Nril~---~~~~Ea~~l~~~-G-~~~ 521 (715)
T 1wdk_A 459 MPLVEVIRGEKSSDLAVATTVAYAKKMGKN-------PIVVNDC-PGF----LVNRVLF---PYFGGFAKLVSA-G-VDF 521 (715)
T ss_dssp CCEEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEEESC-TTT----THHHHHH---HHHHHHHHHHHT-T-CCH
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHhCCE-------eEEEcCC-CCh----hhhHHHH---HHHHHHHHHHHC-C-CCH
Confidence 33 345554 899999999999999975 4788763 444 3444433 467999999986 7 999
Q ss_pred HHHHHHH
Q 011394 220 EELQNVF 226 (487)
Q Consensus 220 ~~i~~v~ 226 (487)
+++.+++
T Consensus 522 ~~id~~~ 528 (715)
T 1wdk_A 522 VRIDKVM 528 (715)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999987
No 76
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.63 E-value=2.3e-15 Score=165.39 Aligned_cols=191 Identities=14% Similarity=0.185 Sum_probs=135.2
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhh-------hhcC----------CCCccccCCHHHHH
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERA-------KKEG----------DLPLFGFRDPESFV 68 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~-------~~~g----------~~~~~~~~s~~e~~ 68 (487)
.++||||||+|.||.+||.+|+++||+|++||+++++++...+.. ...| ..+++.+++++ .+
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~-~~ 389 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYE-SF 389 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSG-GG
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHH-HH
Confidence 467899999999999999999999999999999999887653310 0000 00245566663 34
Q ss_pred hhcCCCcEEEEecCCChhHH-HHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCChhhhcC
Q 011394 69 NSIQKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEGARH 143 (487)
Q Consensus 69 ~~l~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pvsgg~~~a~~ 143 (487)
++ ||+||+|||+...++ .++.++.+.++++.+|++.+++.+.+ ++++.+.. .|.||++ |+..
T Consensus 390 ~~---aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~--~la~~~~~p~~~iG~hf~~-P~~~------- 456 (725)
T 2wtb_A 390 RD---VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLN--KIGERTKSQDRIVGAHFFS-PAHI------- 456 (725)
T ss_dssp TT---CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH--HHTTTCSCTTTEEEEEECS-STTT-------
T ss_pred CC---CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHH--HHHHHhcCCCCEEEecCCC-Cccc-------
Confidence 44 999999999886654 55678888899999987766555443 23332211 2566665 4322
Q ss_pred CC--ccccCC--CHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCH
Q 011394 144 GP--SLMPGG--SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTN 219 (487)
Q Consensus 144 G~--~i~~gg--~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~ 219 (487)
++ .++.|. ++++++.+.++++.+|+. ++++++. .|. +.|.+.. ..++|++.++++ | +|+
T Consensus 457 ~~lvevv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~d~-~Gf----i~Nril~---~~~~Ea~~l~~~-G-~~~ 519 (725)
T 2wtb_A 457 MPLLEIVRTNHTSAQVIVDLLDVGKKIKKT-------PVVVGNC-TGF----AVNRMFF---PYTQAAMFLVEC-G-ADP 519 (725)
T ss_dssp CCEEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEEESS-TTT----THHHHHH---HHHHHHHHHHHT-T-CCH
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHhCCE-------EEEECCC-ccH----HHHHHHH---HHHHHHHHHHHC-C-CCH
Confidence 33 345553 899999999999999975 4788863 444 3454443 457999999987 7 999
Q ss_pred HHHHHHHH
Q 011394 220 EELQNVFT 227 (487)
Q Consensus 220 ~~i~~v~~ 227 (487)
+++.+++.
T Consensus 520 e~id~~~~ 527 (725)
T 2wtb_A 520 YLIDRAIS 527 (725)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999873
No 77
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.63 E-value=3.6e-15 Score=156.10 Aligned_cols=190 Identities=15% Similarity=0.227 Sum_probs=133.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh-----------hhhcC----CCCccccCCHHHHHhhc
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER-----------AKKEG----DLPLFGFRDPESFVNSI 71 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-----------~~~~g----~~~~~~~~s~~e~~~~l 71 (487)
+++|+|||+|.||.+||..|+++|++|++||+++++++...+. +.... ......+++++ .+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~- 114 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELST- 114 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGG-GGTT-
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHH-HHCC-
Confidence 5689999999999999999999999999999999887765432 11000 00123355663 3444
Q ss_pred CCCcEEEEecCCChhH-HHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCChhhhcCCC-
Q 011394 72 QKPRVIIMLVKAGAPV-DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEGARHGP- 145 (487)
Q Consensus 72 ~~advIi~~vp~~~~v-~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pvsgg~~~a~~G~- 145 (487)
+|+||+|||....+ ..++.++.+.++++.+|++ +|+.+..+ ++++.+.. .|.||+ .|+. .++
T Consensus 115 --aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf~-~P~~-------~~~l 182 (463)
T 1zcj_A 115 --VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHFF-SPAH-------VMRL 182 (463)
T ss_dssp --CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEEC-SSTT-------TCCE
T ss_pred --CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeecC-CCcc-------ccee
Confidence 99999999987544 4566888888889999987 45444443 45443321 256665 4543 233
Q ss_pred -ccccC--CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Q 011394 146 -SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEEL 222 (487)
Q Consensus 146 -~i~~g--g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i 222 (487)
.++.| +++++++.+.++++.+|+. ++++++ ..|. +.|.+... .++|++.++++ | ++++++
T Consensus 183 vevv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~~-~~gf----i~Nrll~~---~~~ea~~l~~~-G-~~~~~i 245 (463)
T 1zcj_A 183 LEVIPSRYSSPTTIATVMSLSKKIGKI-------GVVVGN-CYGF----VGNRMLAP---YYNQGFFLLEE-G-SKPEDV 245 (463)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEBCC-STTT----THHHHHHH---HHHHHHHHHHT-T-CCHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHhCCE-------EEEECC-CccH----HHHHHHHH---HHHHHHHHHHc-C-CCHHHH
Confidence 34554 6899999999999999965 478875 3444 44554444 35999999876 7 999999
Q ss_pred HHHHH
Q 011394 223 QNVFT 227 (487)
Q Consensus 223 ~~v~~ 227 (487)
.+++.
T Consensus 246 d~~~~ 250 (463)
T 1zcj_A 246 DGVLE 250 (463)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99985
No 78
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.61 E-value=1.8e-14 Score=143.32 Aligned_cols=253 Identities=13% Similarity=0.150 Sum_probs=155.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc----CCC---CccccCCHHHHHhhcCCCcEEEE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE----GDL---PLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~----g~~---~~~~~~s~~e~~~~l~~advIi~ 79 (487)
+|||+|||+|.||..+|..|+++|++|++|+|++ .+.+.+.+... +.. ++..++++++ +.. +|+||+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~---~D~vil 75 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGP---MDLVLV 75 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCC---CSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCC---CCEEEE
Confidence 3799999999999999999999999999999986 36665543210 000 1223455655 344 999999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHc----CCeEEecCCCCChhhhcCCC-ccccC----
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL----GLLYLGMGVSGGEEGARHGP-SLMPG---- 150 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~i~~pvsgg~~~a~~G~-~i~~g---- 150 (487)
+||+. +++++++.+.+.+.++++||.+.|+... .+.+.+.+... ++.++.+-..+.......++ .+..|
T Consensus 76 avk~~-~~~~~l~~l~~~l~~~~~iv~l~nGi~~-~~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~ 153 (312)
T 3hn2_A 76 GLKTF-ANSRYEELIRPLVEEGTQILTLQNGLGN-EEALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLP 153 (312)
T ss_dssp CCCGG-GGGGHHHHHGGGCCTTCEEEECCSSSSH-HHHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSC
T ss_pred ecCCC-CcHHHHHHHHhhcCCCCEEEEecCCCCc-HHHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCC
Confidence 99986 7889999999999999999999998732 23344444322 22223332222111111222 23333
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHH---------------------HHHHHHHHHHHHH
Q 011394 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI---------------------EYGDMQLIAEAYD 209 (487)
Q Consensus 151 g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~---------------------~~~~~~~~~Ea~~ 209 (487)
.+.+..+.+.++|+.-+.+ +....+.-...+-|++-|.. ...+..++.|+..
T Consensus 154 ~~~~~~~~l~~~l~~~g~~-------~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~ 226 (312)
T 3hn2_A 154 RDTGRIEELAAMFRQAGVD-------CRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIA 226 (312)
T ss_dssp CCSHHHHHHHHHHHHTTCC-------EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHhCCCC-------cEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHH
Confidence 3456778888888887654 24444566667777766643 3445678889999
Q ss_pred HHHHhC---CCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCch
Q 011394 210 VLKSVG---KLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAP 286 (487)
Q Consensus 210 l~~~~g---~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P 286 (487)
++++.| .++.+.+..++....... ....++..++...+. ..+|.+.. +.++.|+++|+|+|
T Consensus 227 va~a~G~~~~~~~~~~~~~~~~~~~~~--~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~~P 290 (312)
T 3hn2_A 227 GANAQGLATFIADGYVDDMLEFTDAMG--EYKPSMEIDREEGRP-----LEIAAIFR---------TPLAYGAREGIAMP 290 (312)
T ss_dssp HHHTSCCSSCCCTTHHHHHHHHHTTSC--SCCCHHHHHHHTTCC-----CCHHHHTH---------HHHHHHHHTTCCCH
T ss_pred HHHHcCCccCCCHHHHHHHHHHHhcCC--CCCchHHHHHHhCCC-----ccHHHHhh---------HHHHHHHHhCCCCC
Confidence 988876 233332333332222111 111233334433321 35677654 57899999999999
Q ss_pred hHHH
Q 011394 287 TIAS 290 (487)
Q Consensus 287 ~~~~ 290 (487)
+...
T Consensus 291 ~~~~ 294 (312)
T 3hn2_A 291 RVEM 294 (312)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9765
No 79
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.61 E-value=5.3e-15 Score=147.64 Aligned_cols=251 Identities=16% Similarity=0.121 Sum_probs=160.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh-----cCCC---CccccCCHHHHHhhcCCCcEEE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK-----EGDL---PLFGFRDPESFVNSIQKPRVII 78 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~-----~g~~---~~~~~~s~~e~~~~l~~advIi 78 (487)
+|||+|||+|.||..+|..|+++|++|++|+|++ .+.+.+.+.. .+.. ++..+++++++.+. +|+||
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~---~DlVi 76 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETK---PDCTL 76 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSC---CSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCC---CCEEE
Confidence 3799999999999999999999999999999987 3566554310 0100 12345666666534 99999
Q ss_pred EecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh------hhhcCCC-cccc--
Q 011394 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE------EGARHGP-SLMP-- 149 (487)
Q Consensus 79 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~------~~a~~G~-~i~~-- 149 (487)
++||.. +++++++.+.+.+.++++||.+.++.... +.+.+.+... .++.+++..+. .-...++ .+.+
T Consensus 77 lavK~~-~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~-~~l~~~~~~~--~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~ 152 (320)
T 3i83_A 77 LCIKVV-EGADRVGLLRDAVAPDTGIVLISNGIDIE-PEVAAAFPDN--EVISGLAFIGVTRTAPGEIWHQAYGRLMLGN 152 (320)
T ss_dssp ECCCCC-TTCCHHHHHTTSCCTTCEEEEECSSSSCS-HHHHHHSTTS--CEEEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred EecCCC-ChHHHHHHHHhhcCCCCEEEEeCCCCChH-HHHHHHCCCC--cEEEEEEEeceEEcCCCEEEECCCCEEEEec
Confidence 999987 67889999999999999999998886422 2344444322 34444433211 1111223 3333
Q ss_pred --CCCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHH--------------------HHHHHHHHHHH
Q 011394 150 --GGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI--------------------EYGDMQLIAEA 207 (487)
Q Consensus 150 --gg~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~--------------------~~~~~~~~~Ea 207 (487)
+.+.+..+.+.++|+.-+.+ +.+..+.-...+.|++-|.. ...+..++.|+
T Consensus 153 ~~~~~~~~~~~l~~~l~~~~~~-------~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~E~ 225 (320)
T 3i83_A 153 YPGGVSERVKTLAAAFEEAGID-------GIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQEI 225 (320)
T ss_dssp SSSCCCHHHHHHHHHHHHTTSC-------EEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHhCCCC-------ceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHHHH
Confidence 34566778888888887654 35555677778888877632 23456789999
Q ss_pred HHHHHHhCCCCHH-H-HHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCc
Q 011394 208 YDVLKSVGKLTNE-E-LQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAA 285 (487)
Q Consensus 208 ~~l~~~~g~i~~~-~-i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~ 285 (487)
..++++.| ++.+ + +..++....... ....++..++...+. ..+|.+.. ..++.|+++|+|+
T Consensus 226 ~~va~a~G-~~l~~~~~~~~~~~~~~~~--~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~~ 288 (320)
T 3i83_A 226 RAVAAANG-HPLPEDIVEKNVASTYKMP--PYKTSMLVDFEAGQP-----METEVILG---------NAVRAGRRTRVAI 288 (320)
T ss_dssp HHHHHHTT-CCCCTTHHHHHHHHHHHSC--CCCCHHHHHHHHTCC-----CCHHHHTH---------HHHHHHHHTTCCC
T ss_pred HHHHHHcC-CCCChHHHHHHHHHHhcCC--CCCCcHHHHHHhCCC-----chHHHHcc---------HHHHHHHHhCCCC
Confidence 99999998 7732 1 222222111111 011123334433221 35677654 5789999999999
Q ss_pred hhHHH
Q 011394 286 PTIAS 290 (487)
Q Consensus 286 P~~~~ 290 (487)
|+...
T Consensus 289 P~~~~ 293 (320)
T 3i83_A 289 PHLES 293 (320)
T ss_dssp HHHHH
T ss_pred CHHHH
Confidence 99765
No 80
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.61 E-value=7.3e-15 Score=145.47 Aligned_cols=195 Identities=14% Similarity=0.188 Sum_probs=136.3
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-------hcC----CC-------CccccCCHHHH
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------KEG----DL-------PLFGFRDPESF 67 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------~~g----~~-------~~~~~~s~~e~ 67 (487)
...||+|||+|.||..+|..++.+|++|++||++++.++...+... ..+ .. ++..++++++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 3468999999999999999999999999999999987654432211 100 00 34566778877
Q ss_pred HhhcCCCcEEEEecCCChhHH-HHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHc----CCeEEecC-CCCChhhh
Q 011394 68 VNSIQKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL----GLLYLGMG-VSGGEEGA 141 (487)
Q Consensus 68 ~~~l~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~i~~p-vsgg~~~a 141 (487)
++. +|+|+.+||..-.++ +++.+|.+..+++.|+-..|++.+.+ ++++.+... |.||+..| ++.-.
T Consensus 85 ~~~---ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is--~ia~~~~~p~r~ig~HffNP~~~m~LV--- 156 (319)
T 3ado_A 85 VEG---VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS--KLFTGLAHVKQCIVAHPVNPPYYIPLV--- 156 (319)
T ss_dssp TTT---EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH--HHHTTCTTGGGEEEEEECSSTTTCCEE---
T ss_pred hcc---CcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccch--hhhhhccCCCcEEEecCCCCccccchH---
Confidence 776 999999999988777 45578888888887776665555433 344333221 56776554 22111
Q ss_pred cCCCccccC--CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCH
Q 011394 142 RHGPSLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTN 219 (487)
Q Consensus 142 ~~G~~i~~g--g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~ 219 (487)
-++.| .++++++.+..+++.+|+++ +.+-....|+ +.|.+. ...+.|++.+.+..+ .++
T Consensus 157 ----Eiv~g~~Ts~~~~~~~~~~~~~~gk~p-------v~v~kd~pGF----i~NRl~---~~~~~EA~~lv~eGv-as~ 217 (319)
T 3ado_A 157 ----ELVPHPETSPATVDRTHALMRKIGQSP-------VRVLKEIDGF----VLNRLQ---YAIISEAWRLVEEGI-VSP 217 (319)
T ss_dssp ----EEEECTTCCHHHHHHHHHHHHHTTCEE-------EECSSCCTTT----THHHHH---HHHHHHHHHHHHTTS-SCH
T ss_pred ----HhcCCCCCcHHHHHHHHHHHHHhCCcc-------CCcCCCCCCE----eHHHHH---HHHHHHHHHHHHhCC-CCH
Confidence 14444 38899999999999999763 4443345554 456654 455599999999887 999
Q ss_pred HHHHHHHH
Q 011394 220 EELQNVFT 227 (487)
Q Consensus 220 ~~i~~v~~ 227 (487)
++++.++.
T Consensus 218 edID~~~~ 225 (319)
T 3ado_A 218 SDLDLVMS 225 (319)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999873
No 81
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.61 E-value=8.3e-16 Score=144.06 Aligned_cols=152 Identities=16% Similarity=0.178 Sum_probs=112.7
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.+|+|+|||+|.||..+|..|+++|++|++|||+++ .++ ++|+||+++| +.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-------------------------~~~---~aD~vi~av~-~~ 68 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------------------ATT---LGEIVIMAVP-YP 68 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-------------------------CSS---CCSEEEECSC-HH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-------------------------Hhc---cCCEEEEcCC-cH
Confidence 357999999999999999999999999999999855 012 3899999999 45
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCc-h--------h----HHHHHHHHHHcCCeEEec-CCCCChhhhc---CC--C-
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWY-E--------N----TERREKAMAELGLLYLGM-GVSGGEEGAR---HG--P- 145 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~-~--------~----~~~~~~~l~~~g~~~i~~-pvsgg~~~a~---~G--~- 145 (487)
+++++++++.+.++ +++||+++++.+ . . ++.+.+.+. +.+++.+ ....++..+. .+ +
T Consensus 69 ~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~p~~~~~~~~g~~~~ 145 (209)
T 2raf_A 69 ALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP--DSQVLKAFNTTFAATLQSGQVNGKEPT 145 (209)
T ss_dssp HHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT--TSEEEECSTTSCHHHHHHSEETTTEEC
T ss_pred HHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC--CCcEEEeeecccHhhccccccCCCCCc
Confidence 78899998888887 999999999654 1 1 334444332 5677762 2222222221 23 3
Q ss_pred ccccCC-CHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHH
Q 011394 146 SLMPGG-SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI 196 (487)
Q Consensus 146 ~i~~gg-~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~ 196 (487)
.++++| +++..+.++++|+.++.+ ++++++.+.+..+|++.|.+
T Consensus 146 ~~~~~g~~~~~~~~v~~ll~~~G~~-------~~~~~~i~~a~~~K~i~~l~ 190 (209)
T 2raf_A 146 TVLVAGNDDSAKQRFTRALADSPLE-------VKDAGKLKRARELEAMGFMQ 190 (209)
T ss_dssp EEEEEESCHHHHHHHHHHTTTSSCE-------EEEEESGGGHHHHHHHHHHH
T ss_pred eeEEcCCCHHHHHHHHHHHHHcCCc-------eEeCCCHhHHHHhcchHHHH
Confidence 445555 568899999999999865 58899999999999998774
No 82
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.60 E-value=6.1e-16 Score=145.63 Aligned_cols=167 Identities=19% Similarity=0.197 Sum_probs=117.9
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.+|+|+|||+|.||..++..|++.|++|++|||++++.+.+.+.+ +... +.+++++. +|+||+++|+.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-------~~~~-~~~~~~~~---~DvVi~av~~~- 94 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSA-------AQVT-FQEEAVSS---PEVIFVAVFRE- 94 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTT-------SEEE-EHHHHTTS---CSEEEECSCGG-
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------Ccee-cHHHHHhC---CCEEEECCChH-
Confidence 467999999999999999999999999999999999887765432 3333 67777665 99999999964
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHH----HHHHHHH--cCCeEEec--CCCCCh--hhhcCCC--ccccCCCH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTER----REKAMAE--LGLLYLGM--GVSGGE--EGARHGP--SLMPGGSF 153 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~----~~~~l~~--~g~~~i~~--pvsgg~--~~a~~G~--~i~~gg~~ 153 (487)
.++.+++ +.+.+ ++++|||++++.+..+.+ ..+.+.+ .+.+++.+ ++++.. .+...|. .++.|+++
T Consensus 95 ~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~ 172 (215)
T 2vns_A 95 HYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNVISAWTLQAGPRDGNRQVPICGDQP 172 (215)
T ss_dssp GSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTTBCHHHHHTCSCSSCCEEEEEESCH
T ss_pred HHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEeccccccHhHhcccccCCceeEEEecCCH
Confidence 5666664 55555 899999999998654321 1122222 12233321 221111 1122344 56778899
Q ss_pred HHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHH
Q 011394 154 EAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIH 193 (487)
Q Consensus 154 ~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~ 193 (487)
+.++.++++|+.+|.+ ++++|+.|+|+.++...
T Consensus 173 ~~~~~v~~ll~~~G~~-------~~~~g~~~~~~~~e~~~ 205 (215)
T 2vns_A 173 EAKRAVSEMALAMGFM-------PVDMGSLASAWEVEAMP 205 (215)
T ss_dssp HHHHHHHHHHHHTTCE-------EEECCSGGGHHHHHHSC
T ss_pred HHHHHHHHHHHHcCCc-------eEeecchhhhhHhhhhh
Confidence 9999999999999976 58999999999877543
No 83
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.52 E-value=9.3e-14 Score=131.06 Aligned_cols=156 Identities=10% Similarity=0.110 Sum_probs=115.0
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
..|||+|||+|.||.+||++|.++||+|++||+.. + ++. +| |+|||+.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~-------------------------~-~~~---aD--ilavP~~- 52 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE-------------------------D-IRD---FE--LVVIDAH- 52 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG-------------------------G-GGG---CS--EEEECSS-
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH-------------------------H-hcc---CC--EEEEcHH-
Confidence 45799999999999999999999999999999830 1 233 89 9999987
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCChhhhcCCCccccCCCHHHHHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGGEEGARHGPSLMPGGSFEAYKYIEDILL 164 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~ 164 (487)
++.+++.++.+.+.+|++|+|+|++.+... .+.+..+|..|++ .|++|.. .++.++++++++.++++++
T Consensus 53 ai~~vl~~l~~~l~~g~ivvd~sgs~~~~v---l~~~~~~g~~fvg~HPm~g~~-------~~i~a~d~~a~~~l~~L~~ 122 (232)
T 3dfu_A 53 GVEGYVEKLSAFARRGQMFLHTSLTHGITV---MDPLETSGGIVMSAHPIGQDR-------WVASALDELGETIVGLLVG 122 (232)
T ss_dssp CHHHHHHHHHTTCCTTCEEEECCSSCCGGG---GHHHHHTTCEEEEEEEEETTE-------EEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCcCHHHH---HHHHHhCCCcEEEeeeCCCCc-------eeeeCCCHHHHHHHHHHHH
Confidence 899999999999999999999876654433 3334467899995 6886542 3445568889999999999
Q ss_pred HHhccCCCCCCeEEEeCCchhhHH-HHhHHHHHHHHHHHHHHHHHHHHHH
Q 011394 165 KVAAQVPDSGPCVTYVSKGGSGNF-VKMIHNGIEYGDMQLIAEAYDVLKS 213 (487)
Q Consensus 165 ~ig~~~~~~~~~~~~~G~~G~g~~-~K~v~N~~~~~~~~~~~Ea~~l~~~ 213 (487)
.+|++ ++++++...-.+ .-.+| ..-...++.++..+.+.
T Consensus 123 ~lG~~-------vv~~~~~~hd~~~AAvsh---~nhLv~L~~~A~~ll~~ 162 (232)
T 3dfu_A 123 ELGGS-------IVEIADDKRAQLAAALTY---AGFLSTLQRDASYFLDE 162 (232)
T ss_dssp HTTCE-------ECCCCGGGHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred HhCCE-------EEEeCHHHHhHHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 99987 477776332222 22233 22245566777766643
No 84
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.49 E-value=3.1e-14 Score=148.79 Aligned_cols=117 Identities=9% Similarity=0.153 Sum_probs=97.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH---HcCCCccchhhHHHHHHHHhhCCCCCCCc
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARI---WKGGCIIRAVFLDRIKKAYDRNADLANLL 400 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~i---w~~Gcii~s~ll~~~~~~~~~~~~~~~ll 400 (487)
.+++|++||+||+++|++|+.++|+|.++++ ..++|..+++++ |+.| .++|++++...+++.+.+.....+
T Consensus 178 ~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~-----~~Gld~~~l~~v~~~w~~G-~~~S~l~e~~~~~l~~~D~~g~~~ 251 (484)
T 4gwg_A 178 EGAGHFVKMVHNGIEYGDMQLICEAYHLMKD-----VLGMAQDEMAQAFEDWNKT-ELDSFLIEITANILKFQDTDGKHL 251 (484)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TSCCCHHHHHHHHHHHTTT-TTCBHHHHHHHHHHHCBCTTSSBS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHcCC-CccchHHHHHHHHHhcCCccCCcc
Confidence 4899999999999999999999999999986 244887666555 9999 689999999999998543234577
Q ss_pred CChhHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCCc
Q 011394 401 VDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA--YFDSYRRERL 448 (487)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~--~~~~~~~~~~ 448 (487)
+|.+.+...++++| ||+++.|+++|+|+|+|++||+ ++++++.+|.
T Consensus 252 ld~i~d~~~~kgtG--~wt~~~A~~~gvp~p~i~~av~~R~~S~~k~~r~ 299 (484)
T 4gwg_A 252 LPKIRDSAGQKGTG--KWTAISALEYGVPVTLIGEAVFARCLSSLKDERI 299 (484)
T ss_dssp GGGSCCCCCSSCTT--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHhccccCcchH--HHHHHHHHHcCCCchHHHHHHHHHHHhhchHHHH
Confidence 77777777889999 9999999999999999999996 5555555543
No 85
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.48 E-value=1.5e-14 Score=142.62 Aligned_cols=246 Identities=14% Similarity=0.141 Sum_probs=149.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHH-hhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFV-NSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~-~~l~~advIi~~vp~~~ 85 (487)
+|||+|||+|.||..+|..|+++|++|++|+|+++.++.....+. .......++.+.+ . .+|+||++||+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~----~~~~~~~~~~~~~~~---~~D~vilavk~~- 73 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHA----PAQDIVVKGYEDVTN---TFDVIIIAVKTH- 73 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTS----CCEEEEEEEGGGCCS---CEEEEEECSCGG-
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCe----eccceecCchHhcCC---CCCEEEEeCCcc-
Confidence 479999999999999999999999999999999765431111110 0112222333332 3 389999999986
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHc----CCeEEecCCCCChhhhcCCC-ccccCCCHHHHHHHH
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL----GLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIE 160 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~i~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~ 160 (487)
+++++++.+.+.+.++++||.+.|+...... +... ++.++.+-..| +..+..++ .+.. ++.+..+.+.
T Consensus 74 ~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~-----~~~~~v~~g~~~~~a~~~~-pg~v~~~~~~~~~-~~~~~~~~l~ 146 (294)
T 3g17_A 74 QLDAVIPHLTYLAHEDTLIILAQNGYGQLEH-----IPFKNVCQAVVYISGQKKG-DVVTHFRDYQLRI-QDNALTRQFR 146 (294)
T ss_dssp GHHHHGGGHHHHEEEEEEEEECCSSCCCGGG-----CCCSCEEECEEEEEEEEET-TEEEEEEEEEEEE-ECSHHHHHHH
T ss_pred CHHHHHHHHHHhhCCCCEEEEeccCcccHhh-----CCCCcEEEEEEEEEEEEcC-CCEEEECCCEEec-CccHHHHHHH
Confidence 7999999999999889999999998754332 2111 22222221111 11111122 2222 3445566676
Q ss_pred HHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHH--------------------HHHHHHHHHHHHHHHHHHhCCCC--
Q 011394 161 DILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNG--------------------IEYGDMQLIAEAYDVLKSVGKLT-- 218 (487)
Q Consensus 161 ~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~--------------------~~~~~~~~~~Ea~~l~~~~g~i~-- 218 (487)
++|+.-+-+ +.+..+.-...+-|++-|. ....+..++.|+.+++++.| ++
T Consensus 147 ~~l~~~~~~-------~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G-~~l~ 218 (294)
T 3g17_A 147 DLVQDSQID-------IVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEG-LNFS 218 (294)
T ss_dssp HHTTTSSCE-------EEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTT-CCCC
T ss_pred HHHHhCCCc-------eEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcC-CCCC
Confidence 776654432 3444556677778887775 23345578899999999988 66
Q ss_pred HHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHH
Q 011394 219 NEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIAS 290 (487)
Q Consensus 219 ~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~ 290 (487)
.+.+.+.+........ ....++..++...+. ..+|.+.. +.++.|+++|+|+|+...
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~~P~~~~ 275 (294)
T 3g17_A 219 EQTVDTIMTIYQGYPD-EMGTSMYYDIVHQQP-----LEVEAIQG---------FIYRRAREHNLDTPYLDT 275 (294)
T ss_dssp HHHHHHHHHHHHTSCT-TCCCHHHHHHHTTCC-----CSGGGTHH---------HHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHHhhcCC-CCCCcHHHHHHcCCC-----ccHHHhhh---------HHHHHHHHhCCCCChHHH
Confidence 4444444432222111 111223334433321 24666654 578999999999999775
No 86
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.47 E-value=3.1e-13 Score=135.84 Aligned_cols=194 Identities=14% Similarity=0.102 Sum_probs=124.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.|+|+|||+|.||.++|++|.+.|++|++|||++++..+..... ++..+ +++++++. +|+||++||+. .
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~------G~~~~-~~~e~~~~---aDvVilavp~~-~ 84 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAH------GLKVA-DVKTAVAA---ADVVMILTPDE-F 84 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHT------TCEEE-CHHHHHHT---CSEEEECSCHH-H
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHC------CCEEc-cHHHHHhc---CCEEEEeCCcH-H
Confidence 46899999999999999999999999999999987643333221 24444 88888877 99999999986 5
Q ss_pred HHHHHH-HHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCChhh------hcCCC-cc-cc--CCCHH
Q 011394 87 VDETIK-TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGGEEG------ARHGP-SL-MP--GGSFE 154 (487)
Q Consensus 87 v~~vl~-~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pvsgg~~~------a~~G~-~i-~~--gg~~~ 154 (487)
...++. ++.+.++++.+|+|+++.. . .+.......++.++. +| +|.... ...|. .+ .+ +.+.+
T Consensus 85 ~~~v~~~~i~~~l~~~~ivi~~~gv~---~-~~~~~~~~~~~~vv~~~P-~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~ 159 (338)
T 1np3_A 85 QGRLYKEEIEPNLKKGATLAFAHGFS---I-HYNQVVPRADLDVIMIAP-KAPGHTVRSEFVKGGGIPDLIAIYQDASGN 159 (338)
T ss_dssp HHHHHHHHTGGGCCTTCEEEESCCHH---H-HTTSSCCCTTCEEEEEEE-SSCSHHHHHHHHTTCCCCEEEEEEECSSSC
T ss_pred HHHHHHHHHHhhCCCCCEEEEcCCch---h-HHHhhcCCCCcEEEeccC-CCCchhHHHHHhccCCCeEEEEecCCCCHH
Confidence 688888 8999999999999985421 1 121111133556664 46 332211 11255 43 33 34677
Q ss_pred HHHHHHHHHHHHhc-cCCCCCCeEEEeCCchhhHHHHhHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHH
Q 011394 155 AYKYIEDILLKVAA-QVPDSGPCVTYVSKGGSGNFVKMIHN-GIEYGDMQLIAEAYDVLKSVGKLTNEEL 222 (487)
Q Consensus 155 ~~~~v~~ll~~ig~-~~~~~~~~~~~~G~~G~g~~~K~v~N-~~~~~~~~~~~Ea~~l~~~~g~i~~~~i 222 (487)
+.+.+..+++.+|. +. -++.+..........++.+ .+..+...+++.++..+.+.| +++++.
T Consensus 160 a~~~~~~l~~~lG~~~a-----gv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~G-l~~~~a 223 (338)
T 1np3_A 160 AKNVALSYACGVGGGRT-----GIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAG-YAPEMA 223 (338)
T ss_dssp HHHHHHHHHHHTTHHHH-----CEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTT-CCHHHH
T ss_pred HHHHHHHHHHHcCCCcc-----ceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcC-CCHHHH
Confidence 88999999999996 20 0244432222222233333 222223444455555556788 998765
No 87
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.7e-13 Score=139.01 Aligned_cols=272 Identities=11% Similarity=0.016 Sum_probs=162.8
Q ss_pred cEEEEcccHHHHHHHHHHHHCCC--------cEEEEeCChHH-----HHHHHHhhhhcC---C----CCccccCCHHHHH
Q 011394 9 RIGLAGLAVMGQNLALNIAEKGF--------PISVYNRTTSK-----VDETVERAKKEG---D----LPLFGFRDPESFV 68 (487)
Q Consensus 9 kIgiIGlG~mG~~lA~~L~~~G~--------~V~v~dr~~~~-----~~~l~~~~~~~g---~----~~~~~~~s~~e~~ 68 (487)
||+|||.|.||++||..|+++|+ +|.+|.|+++. .+.+.....+.. + .++.+++++++++
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 89999999999999999999875 49999998753 333332222110 0 1467788999988
Q ss_pred hhcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhH---HHHHHHHHH-cCCe--EEecCCCCChhhhc
Q 011394 69 NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENT---ERREKAMAE-LGLL--YLGMGVSGGEEGAR 142 (487)
Q Consensus 69 ~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~---~~~~~~l~~-~g~~--~i~~pvsgg~~~a~ 142 (487)
+. +|+||++||.. .++.+++++.+++.++.++|.++.+....+ +.+.+.+.+ .+.. ++..|-+ ..+-++
T Consensus 116 ~~---ad~ii~avPs~-~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~~~~vLsGPs~-A~EVa~ 190 (391)
T 4fgw_A 116 KD---VDIIVFNIPHQ-FLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGIQCGALSGANI-ATEVAQ 190 (391)
T ss_dssp TT---CSEEEECSCGG-GHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCCEEEEEECSCC-HHHHHT
T ss_pred hc---CCEEEEECChh-hhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhCccceeccCCch-HHHhhc
Confidence 87 99999999985 899999999999999999999988764222 112233322 2333 3344433 334444
Q ss_pred CCC-ccccC-CC---------HHHHHHHHHHHHH-----------HhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHH
Q 011394 143 HGP-SLMPG-GS---------FEAYKYIEDILLK-----------VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGD 200 (487)
Q Consensus 143 ~G~-~i~~g-g~---------~~~~~~v~~ll~~-----------ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~ 200 (487)
.-+ .+.++ .+ +...+.++.+|.. +|.++...-|+++.++. |.....++-.|+-.+.+
T Consensus 191 ~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAa-Gi~dGlg~G~NakAALi 269 (391)
T 4fgw_A 191 EHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGC-GFVEGLGWGNNASAAIQ 269 (391)
T ss_dssp TCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHH-HHHHHTTCHHHHHHHHH
T ss_pred CCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHH-HHHhcCCCCCCHHHHHH
Confidence 444 33332 22 1223456666532 11110001133444432 55555677889999999
Q ss_pred HHHHHHHHHHHHHh--CCCCHHHH------HHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhcc--CCCCc
Q 011394 201 MQLIAEAYDVLKSV--GKLTNEEL------QNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKT--GMKGT 270 (487)
Q Consensus 201 ~~~~~Ea~~l~~~~--g~i~~~~i------~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~--~~kgt 270 (487)
...++|+..++... ||-++..+ -|++-+.. + .+++.+. ..+.+ .+..++.+.+.+ +|+-+
T Consensus 270 trGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~Tc~-s-SRNr~~G---~~lg~-----~G~~~~~~~~~~~~g~v~E 339 (391)
T 4fgw_A 270 RVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCA-G-GRNVKVA---RLMAT-----SGKDAWECEKELLNGQSAQ 339 (391)
T ss_dssp HHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHHHHH-S-SHHHHHH---HHHHH-----TCCCHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHHHHhcccCCceeecCCCcccceeEEec-C-CccHHHH---HHHHh-----cCCCHHHHHHHHhCCCEEe
Confidence 99999999999987 32333322 22221110 1 1111111 11111 123445555554 67888
Q ss_pred hHHHHH----HHHHcCC--CchhHHHHHHHHHh
Q 011394 271 GKWTVQ----QAADLSV--AAPTIASSLDARFL 297 (487)
Q Consensus 271 g~~~~~----~a~~~gv--~~P~~~~a~~~r~~ 297 (487)
|..++. .++++|+ .+|++.+ |++-+.
T Consensus 340 Gv~ta~~v~~l~~~~~v~~emPI~~~-vy~IL~ 371 (391)
T 4fgw_A 340 GLITCKEVHEWLETCGSVEDFPLFEA-VYQIVY 371 (391)
T ss_dssp HHHHHHHHHHHHHHHTCSTTCHHHHH-HHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCCCCCHHHH-HHHHHh
Confidence 877764 4667898 8998765 555443
No 88
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.40 E-value=4.8e-15 Score=147.43 Aligned_cols=137 Identities=14% Similarity=0.172 Sum_probs=105.2
Q ss_pred CCCCcEEEEcccHHHHHHHHHHHHC-CC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 5 KQLTRIGLAGLAVMGQNLALNIAEK-GF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~lA~~L~~~-G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
...++|+|||+|.||..++.+|++. |+ +|.+|||++++.+++.+.... ++..+.+++++++. +|+|++|+|
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~----~~~~~~~~~e~v~~---aDiVi~atp 205 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG----EVRVCSSVQEAVAG---ADVIITVTL 205 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSS----CCEECSSHHHHHTT---CSEEEECCC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhC----CeEEeCCHHHHHhc---CCEEEEEeC
Confidence 3457899999999999999999886 76 899999999999998875321 14567899999887 999999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe----cCCCCCh----hhhcCCC-ccccCCCH
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG----MGVSGGE----EGARHGP-SLMPGGSF 153 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~----~pvsgg~----~~a~~G~-~i~~gg~~ 153 (487)
.. +.++.. +.+++|++|+++++..|.. .++.+.+.+++..|+| +|+..|. .++..|+ ..|++|+.
T Consensus 206 ~~---~~v~~~--~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~~~vD~~~~a~~~~G~~~~~~~~~~g~L~~~v~G~~ 279 (312)
T 2i99_A 206 AT---EPILFG--EWVKPGAHINAVGASRPDW-RELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVK 279 (312)
T ss_dssp CS---SCCBCG--GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSEEEESCHHHHHHHCHHHHTTTCCCCEEHHHHHHTSS
T ss_pred CC---CcccCH--HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCEEEECCHHHHHhhcCCcccChhhccccHHHHhCCCC
Confidence 64 233322 5678999999999888864 5666777778899999 6773343 3445566 66777765
Q ss_pred H
Q 011394 154 E 154 (487)
Q Consensus 154 ~ 154 (487)
+
T Consensus 280 ~ 280 (312)
T 2i99_A 280 P 280 (312)
T ss_dssp C
T ss_pred C
Confidence 4
No 89
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.40 E-value=3.5e-13 Score=133.60 Aligned_cols=243 Identities=14% Similarity=0.040 Sum_probs=135.1
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc--------cCCHHHHHhhcCCCcEEE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG--------FRDPESFVNSIQKPRVII 78 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~--------~~s~~e~~~~l~~advIi 78 (487)
+|||+|||+|.||..+|..|+ +|++|++|+|++++.+.+.+.+.. +.. .....+.. ..+|+||
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~-----~~~~~~~~~~~~~~~~~~~---~~~D~vi 72 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIR-----LYKGGEEFRADCSADTSIN---SDFDLLV 72 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEE-----EEETTEEEEECCEEESSCC---SCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCce-----EecCCCeeccccccccccc---CCCCEEE
Confidence 479999999999999999999 999999999999988888765421 110 00001222 3499999
Q ss_pred EecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec------CCCC-Chh-hhcCCCccccC
Q 011394 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM------GVSG-GEE-GARHGPSLMPG 150 (487)
Q Consensus 79 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~------pvsg-g~~-~a~~G~~i~~g 150 (487)
++||+. +++++++.+.+. .++. ||...|+.... +.+.+.+. .-.++.+ -..+ |.. ....|. +..|
T Consensus 73 lavK~~-~~~~~l~~l~~~-~~~~-ivs~~nGi~~~-e~l~~~~~--~~~vl~g~~~~~a~~~~pg~v~~~~~g~-~~iG 145 (307)
T 3ego_A 73 VTVKQH-QLQSVFSSLERI-GKTN-ILFLQNGMGHI-HDLKDWHV--GHSIYVGIVEHGAVRKSDTAVDHTGLGA-IKWS 145 (307)
T ss_dssp ECCCGG-GHHHHHHHTTSS-CCCE-EEECCSSSHHH-HHHHTCCC--SCEEEEEEECCEEEECSSSEEEEEECCC-EEEE
T ss_pred EEeCHH-HHHHHHHHhhcC-CCCe-EEEecCCccHH-HHHHHhCC--CCcEEEEEEeeceEECCCCEEEEeeeee-EEEE
Confidence 999975 789999888764 4555 88888887422 12222111 1122221 1111 110 011122 2222
Q ss_pred ---CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHH---------------------HHHHHHHHHH
Q 011394 151 ---GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI---------------------EYGDMQLIAE 206 (487)
Q Consensus 151 ---g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~---------------------~~~~~~~~~E 206 (487)
++.+.++.+..+|..-+. + +.+..+.-...+-|++.|.. ...+..++.|
T Consensus 146 ~~~~~~~~~~~l~~~l~~ag~------~-~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E 218 (307)
T 3ego_A 146 AFDDAEPDRLNILFQHNHSDF------P-IYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQE 218 (307)
T ss_dssp ECTTCCGGGGTTTTSSCCTTS------C-EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHH
T ss_pred eCCCCcHHHHHHHHHhhhCCC------C-cEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHH
Confidence 222222222222222121 2 23444566677788877742 2334567778
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCch
Q 011394 207 AYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAP 286 (487)
Q Consensus 207 a~~l~~~~g~i~~~~i~~v~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P 286 (487)
+..+++.. +++++.+-+....... .....++..++...+. ..+|.+.. ..++.|+++|+|+|
T Consensus 219 ~~~va~~~---~~~~~~~~~~~~~~~~-~~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~tP 280 (307)
T 3ego_A 219 ACRILKLE---NEEKAWERVQAVCGQT-KENRSSMLVDVIGGRQ-----TEADAIIG---------YLLKEASLQGLDAV 280 (307)
T ss_dssp HHHHHTCS---CHHHHHHHHHHHHHHT-TTCCCHHHHHHHHTCC-----CSHHHHHH---------HHHHHHHHTTCCCH
T ss_pred HHHHHhcc---ChHHHHHHHHHHHHhc-CCCCchHHHHHHcCCc-----ccHHHhhh---------HHHHHHHHcCCCCc
Confidence 88777533 2343333221111100 1111223334433321 35777765 47899999999999
Q ss_pred hHHH
Q 011394 287 TIAS 290 (487)
Q Consensus 287 ~~~~ 290 (487)
+...
T Consensus 281 ~~~~ 284 (307)
T 3ego_A 281 HLEF 284 (307)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 90
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.30 E-value=2.5e-12 Score=125.79 Aligned_cols=117 Identities=13% Similarity=0.128 Sum_probs=100.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|++|||++++.+. ....++++++++. +|+|++++|....+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------~~~~~~l~ell~~---aDiV~l~~P~t~~t 187 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------------DVISESPADLFRQ---SDFVLIAIPLTDKT 187 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------------SEECSSHHHHHHH---CSEEEECCCCCTTT
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------------ccccCChHHHhhc---cCeEEEEeeccccc
Confidence 58999999999999999999999999999998764321 2346689999988 99999999977677
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~ 139 (487)
+.++ .+.++.+++|.++||+|++.+.+...+.+.+++.++......|+..++
T Consensus 188 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP 240 (290)
T 3gvx_A 188 RGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEP 240 (290)
T ss_dssp TTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTT
T ss_pred hhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCc
Confidence 7766 667888999999999999999999999999998888887777777654
No 91
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.29 E-value=5.2e-11 Score=122.47 Aligned_cols=99 Identities=14% Similarity=0.193 Sum_probs=77.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHH-CCCcEEEEe---CChHHHHHHHHhhh------hcCC------CCcc-ccCCHHHHHh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAE-KGFPISVYN---RTTSKVDETVERAK------KEGD------LPLF-GFRDPESFVN 69 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~-~G~~V~v~d---r~~~~~~~l~~~~~------~~g~------~~~~-~~~s~~e~~~ 69 (487)
||||+|||+|.||..+|..|++ +|++|++|| |++++++.+.+... ..++ .++. .++++++++.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 4799999999999999999998 599999999 88888877443321 0000 0122 5567888777
Q ss_pred hcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCC
Q 011394 70 SIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 70 ~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st 109 (487)
. +|+||++||+. +.+++++++.+.+.++++|++..+
T Consensus 82 ~---aD~Vilav~~~-~~~~v~~~l~~~l~~~~ivv~~~~ 117 (404)
T 3c7a_A 82 G---ADVVILTVPAF-AHEGYFQAMAPYVQDSALIVGLPS 117 (404)
T ss_dssp T---CSEEEECSCGG-GHHHHHHHHTTTCCTTCEEEETTC
T ss_pred C---CCEEEEeCchH-HHHHHHHHHHhhCCCCcEEEEcCC
Confidence 6 99999999986 689999999999999999998543
No 92
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.29 E-value=2.3e-11 Score=133.18 Aligned_cols=193 Identities=16% Similarity=0.244 Sum_probs=132.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhh-----------hhcC----CCCccccCCHHHHHhhc
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERA-----------KKEG----DLPLFGFRDPESFVNSI 71 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~-----------~~~g----~~~~~~~~s~~e~~~~l 71 (487)
..||||||+|.||..||..++.+|++|+++|++++.++...+.. .... ..++..+++.+++.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--- 392 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELS--- 392 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGG---
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHh---
Confidence 46899999999999999999999999999999998765433211 0000 00345566666543
Q ss_pred CCCcEEEEecCCChhHHH-HHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHH--c--CCeEEecC-CCCChhhhcCCC
Q 011394 72 QKPRVIIMLVKAGAPVDE-TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE--L--GLLYLGMG-VSGGEEGARHGP 145 (487)
Q Consensus 72 ~~advIi~~vp~~~~v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~--~--g~~~i~~p-vsgg~~~a~~G~ 145 (487)
+||+||.+|+....++. ++.++.+.++++.|+...|++.|.+ ++++.+.. + |.||+..| ++.-.
T Consensus 393 -~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~--~ia~~~~~p~r~ig~HFfnP~~~m~LV------- 462 (742)
T 3zwc_A 393 -TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVD--DIASSTDRPQLVIGTHFFSPAHVMRLL------- 462 (742)
T ss_dssp -SCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH--HHHTTSSCGGGEEEEECCSSTTTCCEE-------
T ss_pred -hCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChH--HHHhhcCCccccccccccCCCCCCceE-------
Confidence 39999999999887774 5578888888888887666655443 34332211 1 55665433 11111
Q ss_pred ccccC--CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Q 011394 146 SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQ 223 (487)
Q Consensus 146 ~i~~g--g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~ 223 (487)
-|+.| .++++++.+..+.+.+++.+ +.+.+ ..|. +.|.+ ....+.|++.++.. | .+++++.
T Consensus 463 Evi~g~~Ts~e~~~~~~~~~~~lgK~p-------V~vkd-~pGF----i~NRi---~~~~~~ea~~l~~e-G-~~~~~id 525 (742)
T 3zwc_A 463 EVIPSRYSSPTTIATVMSLSKKIGKIG-------VVVGN-CYGF----VGNRM---LAPYYNQGFFLLEE-G-SKPEDVD 525 (742)
T ss_dssp EEEECSSCCHHHHHHHHHHHHHTTCEE-------EECCC-STTT----THHHH---HHHHHHHHHHHHHT-T-CCHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHhCCCC-------cccCC-CCCc----cHHHH---hhHHHHHHHHHHHc-C-CCHHHHH
Confidence 14444 48899999999999999763 55653 5555 44665 44556999998875 6 8999999
Q ss_pred HHHHhh
Q 011394 224 NVFTEW 229 (487)
Q Consensus 224 ~v~~~~ 229 (487)
+++..+
T Consensus 526 ~a~~~~ 531 (742)
T 3zwc_A 526 GVLEEF 531 (742)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 987543
No 93
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.28 E-value=1.2e-11 Score=123.70 Aligned_cols=112 Identities=15% Similarity=0.165 Sum_probs=91.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|||||+|.||..+|+.|...|++|++|||++++.+.+.+. ++... +++++++. +|+|++++|....
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-------g~~~~-~l~e~l~~---aDvVi~~vp~~~~ 223 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF-------QAEFV-STPELAAQ---SDFIVVACSLTPA 223 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT-------TCEEC-CHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhc-------CceeC-CHHHHHhh---CCEEEEeCCCChH
Confidence 3589999999999999999999999999999988765544322 23444 88888887 9999999998766
Q ss_pred HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeE
Q 011394 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLY 129 (487)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~ 129 (487)
++.++ .++.+.+++|.++|++|++.+.+...+.+.+.+.++..
T Consensus 224 t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~g 267 (330)
T 2gcg_A 224 TEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAA 267 (330)
T ss_dssp TTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSE
T ss_pred HHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccE
Confidence 66666 46777889999999999998888888888887765543
No 94
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.26 E-value=2.4e-11 Score=121.73 Aligned_cols=119 Identities=21% Similarity=0.206 Sum_probs=95.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|||||+|.||..+|+.|...|++|++|||++++ +...+.+ +. ..+++++++. +|+|++++|....
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~-~~~l~~~l~~---aDvVil~vp~~~~ 217 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELN-------AE-FKPLEDLLRE---SDFVVLAVPLTRE 217 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHC-------CE-ECCHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcC-------cc-cCCHHHHHhh---CCEEEECCCCChH
Confidence 368999999999999999999999999999999876 4333222 33 3588888887 9999999998876
Q ss_pred HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011394 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (487)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg 137 (487)
++.++ .++.+.++++.++|++|++.+.+...+.+.+.+..+......|++.
T Consensus 218 t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ 269 (334)
T 2dbq_A 218 TYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEE 269 (334)
T ss_dssp TTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSS
T ss_pred HHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCC
Confidence 76666 4677888999999999999988888888888876665544445543
No 95
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.26 E-value=2.4e-11 Score=122.37 Aligned_cols=121 Identities=16% Similarity=0.163 Sum_probs=97.1
Q ss_pred CcEEEEcccHHHHHHHHHHH-HCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIA-EKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~-~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
++|||||+|.||..+|+.|. ..|++|.+|||++++.+...+.+ +..+.+++++++. +|+|++++|....
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g-------~~~~~~l~ell~~---aDvVil~vp~~~~ 233 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALG-------AERVDSLEELARR---SDCVSVSVPYMKL 233 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHHHH---CSEEEECCCCSGG
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcC-------cEEeCCHHHHhcc---CCEEEEeCCCChH
Confidence 58999999999999999999 99999999999987655443322 3445688898887 9999999998876
Q ss_pred HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
++.++ .++++.++++.+|||++++.+.+...+.+.+.+..+......|++.+
T Consensus 234 t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~E 286 (348)
T 2w2k_A 234 THHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFE 286 (348)
T ss_dssp GTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTT
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCC
Confidence 77766 45677889999999999999888888888887755544555666543
No 96
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.26 E-value=1.7e-11 Score=123.17 Aligned_cols=121 Identities=15% Similarity=0.093 Sum_probs=99.1
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||..+|++|...|++|.+|||++...+.+.+.+ +....+++++++. +|+|++++|....+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~l~ell~~---aDvV~l~~Plt~~t 234 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETG-------AKFVEDLNEMLPK---CDVIVINMPLTEKT 234 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHC-------CEECSCHHHHGGG---CSEEEECSCCCTTT
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCC-------CeEcCCHHHHHhc---CCEEEECCCCCHHH
Confidence 5899999999999999999999999999999875555444332 4556789999988 99999999977677
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
+.++ .+.++.+++|.++||++++...+...+.+.+.+..+......|+..+
T Consensus 235 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~E 286 (351)
T 3jtm_A 235 RGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQ 286 (351)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSS
T ss_pred HHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCC
Confidence 7666 56778899999999999999999999999998876654444455443
No 97
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.25 E-value=8.7e-13 Score=125.74 Aligned_cols=159 Identities=15% Similarity=0.148 Sum_probs=110.1
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
|||||||+|.||..++.+|.+.|++| .+||+++ +.+ ..+++++++++ .++|+|++|+|+..
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~--------------~~~~~~~~l~~--~~~DvVv~~~~~~~- 62 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHE--------------KMVRGIDEFLQ--REMDVAVEAASQQA- 62 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCT--------------TEESSHHHHTT--SCCSEEEECSCHHH-
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chh--------------hhcCCHHHHhc--CCCCEEEECCCHHH-
Confidence 58999999999999999999999997 6999985 221 13678888873 23999999999763
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhH---HHHHHHHHHcCCe-EEecCCCCChhhhcCCCccccCCCHHHHHHHHHH
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENT---ERREKAMAELGLL-YLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDI 162 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~---~~~~~~l~~~g~~-~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~l 162 (487)
..+++ ...+..|..||+.++..+... +++.+..+++|.. ++++|++|+...+..+.. +++...+...++.
T Consensus 63 ~~~~~---~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 63 VKDYA---EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSASE---LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHH---HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHHTGG---GEEEEEEEEEEEG
T ss_pred HHHHH---HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHHhhc---cccEEEEEEEcCh
Confidence 33333 344568999999988765433 5666666777877 689999999876665543 4443333333343
Q ss_pred HHHHhccCCCCCCeEEEeCCchhh-HHHHhHHHHHH
Q 011394 163 LLKVAAQVPDSGPCVTYVSKGGSG-NFVKMIHNGIE 197 (487)
Q Consensus 163 l~~ig~~~~~~~~~~~~~G~~G~g-~~~K~v~N~~~ 197 (487)
++..+ ++++|.|+.+.+ ...|...|.+.
T Consensus 137 ~~~~~-------~~~~~~G~~~~~~~~~~~~~n~~~ 165 (236)
T 2dc1_A 137 RQFGR-------KGVIFEGSASEAAQKFPKNLNVAA 165 (236)
T ss_dssp GGTTS-------CEEEEEEEHHHHHHHSTTCCHHHH
T ss_pred HHcCc-------ceEEEeccHHHHHHHCCchHHHHH
Confidence 33333 457888885433 45666666653
No 98
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.24 E-value=3e-11 Score=121.42 Aligned_cols=119 Identities=13% Similarity=0.104 Sum_probs=97.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|+++...|++|.+|||++.. +...+. ++..+.++++++++ +|+|++++|...++
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~-------g~~~~~~l~ell~~---aDiV~l~~Plt~~t 229 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERARAD-------GFAVAESKDALFEQ---SDVLSVHLRLNDET 229 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHHHT-------TCEECSSHHHHHHH---CSEEEECCCCSTTT
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHHhc-------CceEeCCHHHHHhh---CCEEEEeccCcHHH
Confidence 58999999999999999999999999999998643 333332 24566799999988 99999999987677
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg 137 (487)
+.++ .+.++.+++|.++||++++...+...+.+.+.+..+......|+..
T Consensus 230 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~ 280 (352)
T 3gg9_A 230 RSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFET 280 (352)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSS
T ss_pred HHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCC
Confidence 7666 5677889999999999999999999999999888776544444433
No 99
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.22 E-value=4.4e-11 Score=119.45 Aligned_cols=115 Identities=16% Similarity=0.186 Sum_probs=93.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|||||+|.||+.+|+.|...|++|.+|||++++.. + .....++++++++ +|+|++++|....
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g-------~~~~~~l~ell~~---aDvVil~vP~~~~ 228 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----N-------YTYYGSVVELASN---SDILVVACPLTPE 228 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----C-------SEEESCHHHHHHT---CSEEEECSCCCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----C-------ceecCCHHHHHhc---CCEEEEecCCChH
Confidence 35899999999999999999999999999999976531 1 3346789998887 9999999998766
Q ss_pred HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011394 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (487)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsg 136 (487)
++.++ .+.++.++++.++||+|++.+.++..+.+.+.+..+.....-|+.
T Consensus 229 t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 229 TTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp GTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 77777 456677889999999999999999999998887655544333333
No 100
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.20 E-value=4.3e-11 Score=119.64 Aligned_cols=116 Identities=19% Similarity=0.265 Sum_probs=76.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|+++...|++|.+|||++++. . ......+++|+++. +|+|++++|...++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~-------~~~~~~sl~ell~~---aDvVil~vP~t~~t 236 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG-----V-------DWIAHQSPVDLARD---SDVLAVCVAASAAT 236 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT-----S-------CCEECSSHHHHHHT---CSEEEECC------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc-----c-------CceecCCHHHHHhc---CCEEEEeCCCCHHH
Confidence 689999999999999999999999999999997641 1 13456789999988 99999999987788
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
+.++ .+.++.++++.++||++++...+...+.+.+++..+......|+..+
T Consensus 237 ~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~E 288 (340)
T 4dgs_A 237 QNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNE 288 (340)
T ss_dssp ----CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSS
T ss_pred HHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCC
Confidence 8888 67788899999999999999999888888888776655555555443
No 101
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.19 E-value=7.2e-11 Score=118.23 Aligned_cols=120 Identities=17% Similarity=0.221 Sum_probs=97.8
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|.+|||++...+... + ...+.++++++++ +|+|++++|...++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g-------~~~~~~l~ell~~---sDvV~l~~Plt~~T 241 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--G-------AIYHDTLDSLLGA---SDIFLIAAPGRPEL 241 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--T-------CEECSSHHHHHHT---CSEEEECSCCCGGG
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--C-------CeEeCCHHHHHhh---CCEEEEecCCCHHH
Confidence 5899999999999999999999999999999875433211 2 3456799999987 99999999987777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~ 139 (487)
+.++ .+.+..+++|.++||++.+...+...+.+.+.+..+......|+..++
T Consensus 242 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP 294 (345)
T 4g2n_A 242 KGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP 294 (345)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC
Confidence 7766 567788999999999999999999999999987666555555655544
No 102
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.19 E-value=8.9e-12 Score=123.91 Aligned_cols=119 Identities=16% Similarity=0.154 Sum_probs=97.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|.+|||+++..+.+. ......++++++++ +|+|++++|...++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---------~~~~~~~l~ell~~---aDvV~l~lPlt~~t 205 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFH---------ETVAFTATADALAT---ANFIVNALPLTPTT 205 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCS---------EEEEGGGCHHHHHH---CSEEEECCCCCGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHh---------hccccCCHHHHHhh---CCEEEEcCCCchHH
Confidence 5899999999999999999999999999999876532211 11234678899888 99999999987777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
+.++ .+.+..+++|.++||+|++...+...+.+.+.+..+......|+..+
T Consensus 206 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~E 257 (324)
T 3evt_A 206 HHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPE 257 (324)
T ss_dssp TTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSS
T ss_pred HHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCC
Confidence 7766 56778899999999999999999999999998877766666666554
No 103
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.19 E-value=9.1e-11 Score=117.23 Aligned_cols=119 Identities=18% Similarity=0.235 Sum_probs=97.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|.+|||+++.... +.+ +. ..+++++++. +|+|++++|....+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g-------~~-~~~l~ell~~---aDvV~l~~P~t~~t 208 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK--EKG-------CV-YTSLDELLKE---SDVISLHVPYTKET 208 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTT-------CE-ECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH--hcC-------ce-ecCHHHHHhh---CCEEEEeCCCChHH
Confidence 58999999999999999999999999999999876432 222 23 3459999988 99999999987677
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~ 139 (487)
+.++ .+.++.+++|.++||++++.+.+...+.+.+.+..+.....-|+..++
T Consensus 209 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP 261 (334)
T 2pi1_A 209 HHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEE 261 (334)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHH
T ss_pred HHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCC
Confidence 7666 567788999999999999999999999999987766655666666554
No 104
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.18 E-value=4.3e-11 Score=120.19 Aligned_cols=118 Identities=15% Similarity=0.169 Sum_probs=94.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
-++|||||+|.||+.+|++|...|++|.+||+++++.. ....+ +..+.+++++++. +|+|++++|...+
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~g-------~~~~~~l~ell~~---aDvV~l~~P~t~~ 236 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERALG-------LQRVSTLQDLLFH---SDCVTLHCGLNEH 236 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHHT-------CEECSSHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-HhhcC-------CeecCCHHHHHhc---CCEEEEcCCCCHH
Confidence 35899999999999999999999999999999876421 12111 3445689999988 9999999998767
Q ss_pred HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCC
Q 011394 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVS 135 (487)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvs 135 (487)
++.++ ++.++.+++|.++||++++.+.+...+.+.+.+.++.....-|+
T Consensus 237 t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~ 286 (347)
T 1mx3_A 237 NHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVH 286 (347)
T ss_dssp CTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCC
T ss_pred HHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeec
Confidence 77777 56778899999999999999999999999998876654333333
No 105
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.18 E-value=3.1e-11 Score=120.53 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=98.1
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|.+|||++.+.+...+.+ +. ..+++++++. +|+|++++|....+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g-------~~-~~~l~ell~~---aDvV~l~~P~t~~t 214 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLG-------LR-QVACSELFAS---SDFILLALPLNADT 214 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHT-------EE-ECCHHHHHHH---CSEEEECCCCSTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcC-------ce-eCCHHHHHhh---CCEEEEcCCCCHHH
Confidence 5899999999999999999999999999999975444433332 22 3489999988 99999999987667
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
+.++ .+.++.+++|.++||++++.+.+...+.+.+.+.++.....-|+..+
T Consensus 215 ~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E 266 (330)
T 4e5n_A 215 LHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEME 266 (330)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGG
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccc
Confidence 7666 57788899999999999999999999999998887765555565444
No 106
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.17 E-value=6.4e-11 Score=117.82 Aligned_cols=118 Identities=14% Similarity=0.180 Sum_probs=92.9
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeC-ChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNR-TTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
++|||||+|.||..+|++|...|++|++||+ ++++. ...+.+ +....+++++++. +|+|++++|...+
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g-------~~~~~~l~ell~~---aDvVil~~p~~~~ 215 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQ-------ATFHDSLDSLLSV---SQFFSLNAPSTPE 215 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHT-------CEECSSHHHHHHH---CSEEEECCCCCTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcC-------cEEcCCHHHHHhh---CCEEEEeccCchH
Confidence 5899999999999999999999999999999 87663 222222 3445589999887 9999999998766
Q ss_pred HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011394 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (487)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsg 136 (487)
++.++ +..++.+++|.++||++++.+.+...+.+.+.+..+.-...-|+.
T Consensus 216 t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~ 266 (320)
T 1gdh_A 216 TRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFA 266 (320)
T ss_dssp TTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCT
T ss_pred HHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCC
Confidence 77666 457788999999999999988788888888877654433333443
No 107
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.16 E-value=5.7e-11 Score=118.84 Aligned_cols=118 Identities=13% Similarity=0.162 Sum_probs=93.1
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
-++|||||+|.||+.+|+.|...|++|++|||++++ +...+.+ +.. .+++++++. +|+|++++|....
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~~-~~l~e~l~~---aDiVil~vp~~~~ 213 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELK-------ARY-MDIDELLEK---SDIVILALPLTRD 213 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHT-------EEE-CCHHHHHHH---CSEEEECCCCCTT
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcC-------cee-cCHHHHHhh---CCEEEEcCCCChH
Confidence 358999999999999999999999999999999876 3333222 333 378888887 9999999998866
Q ss_pred HHHHHH-HHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011394 87 VDETIK-TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (487)
Q Consensus 87 v~~vl~-~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg 137 (487)
++.++. ++.+.++++ ++||+|++.+.+...+.+.+.+..+......+++.
T Consensus 214 t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 264 (333)
T 2d0i_A 214 TYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEK 264 (333)
T ss_dssp TTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSS
T ss_pred HHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCC
Confidence 777763 566788899 99999999988888888888765555555555543
No 108
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.16 E-value=1.1e-11 Score=123.20 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=95.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|++|||++...+.+. ......+++++++. +|+|++++|...++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---------~~~~~~~l~ell~~---aDvV~l~lPlt~~T 208 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD---------QVYQLPALNKMLAQ---ADVIVSVLPATRET 208 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS---------EEECGGGHHHHHHT---CSEEEECCCCCSSS
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh---------cccccCCHHHHHhh---CCEEEEeCCCCHHH
Confidence 5899999999999999999999999999999874322110 12235688999887 99999999977667
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
+.++ .+.+..+++|.++||+|++.+.+...+.+.+.+..+......|+..+
T Consensus 209 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~E 260 (324)
T 3hg7_A 209 HHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQE 260 (324)
T ss_dssp TTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSS
T ss_pred HHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCC
Confidence 7666 45667789999999999999999999999998876655544555443
No 109
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.15 E-value=9.3e-11 Score=115.97 Aligned_cols=109 Identities=19% Similarity=0.181 Sum_probs=89.8
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||..+|++|...|++|++|||++++ +...+.+ +.. .+++++++. +|+|++++|...++
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~~-~~l~ell~~---aDvV~l~~p~~~~t 210 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVN-------GKF-VDLETLLKE---SDVVTIHVPLVEST 210 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTT-------CEE-CCHHHHHHH---CSEEEECCCCSTTT
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcC-------ccc-cCHHHHHhh---CCEEEEecCCChHH
Confidence 58999999999999999999999999999999876 3333322 333 478898887 99999999987666
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (487)
+.++ .+.++.+++|.++||++++.+.+...+.+.+.+..+.
T Consensus 211 ~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 211 YHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 6666 4667789999999999999888888888888876554
No 110
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.15 E-value=6e-11 Score=117.68 Aligned_cols=118 Identities=13% Similarity=0.133 Sum_probs=92.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|++|||++++. ...+.+ +.. .+++++++. +|+|++++|...++
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g-------~~~-~~l~ell~~---aDvVvl~~P~~~~t 210 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKIN-------AKA-VSLEELLKN---SDVISLHVTVSKDA 210 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTT-------CEE-CCHHHHHHH---CSEEEECCCCCTTS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcC-------cee-cCHHHHHhh---CCEEEEeccCChHH
Confidence 589999999999999999999999999999998764 222222 333 488899887 99999999987666
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg 137 (487)
+.++ ++.++.+++|.++||++++.+.+...+.+.+.+.++.-...-|+..
T Consensus 211 ~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~ 261 (313)
T 2ekl_A 211 KPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWN 261 (313)
T ss_dssp CCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSS
T ss_pred HHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCC
Confidence 6666 5566788999999999999988888888888776543333334433
No 111
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.14 E-value=1.6e-10 Score=118.68 Aligned_cols=148 Identities=14% Similarity=0.106 Sum_probs=101.8
Q ss_pred CcEEEEcccHHHHHHHHHHHHC------CCcEEEEeCChHH-HHHHHHhhhhcCCCCccc----cCCHHHHHhhcCCCcE
Q 011394 8 TRIGLAGLAVMGQNLALNIAEK------GFPISVYNRTTSK-VDETVERAKKEGDLPLFG----FRDPESFVNSIQKPRV 76 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~------G~~V~v~dr~~~~-~~~l~~~~~~~g~~~~~~----~~s~~e~~~~l~~adv 76 (487)
+||||||+|+||.++|++|.++ |++|++++++.++ .+...+.+ +.. +.+++|+++. +|+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G-------~~v~d~ta~s~aEAa~~---ADV 124 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAG-------FTEESGTLGDIWETVSG---SDL 124 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTT-------CCTTTTCEEEHHHHHHH---CSE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCC-------CEEecCCCCCHHHHHhc---CCE
Confidence 6899999999999999999999 9999988776443 33333333 232 3688999988 999
Q ss_pred EEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHH--HHHHcCCeEE-ecCCCCChh-------hh---cC
Q 011394 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREK--AMAELGLLYL-GMGVSGGEE-------GA---RH 143 (487)
Q Consensus 77 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~--~l~~~g~~~i-~~pvsgg~~-------~a---~~ 143 (487)
||++||+. ....+++++.+.+++|++|+.+.... ...+.+ .....++.++ -+|-..+.. +. -.
T Consensus 125 VILaVP~~-~~~eVl~eI~p~LK~GaILs~AaGf~---I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~ 200 (525)
T 3fr7_A 125 VLLLISDA-AQADNYEKIFSHMKPNSILGLSHGFL---LGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGA 200 (525)
T ss_dssp EEECSCHH-HHHHHHHHHHHHSCTTCEEEESSSHH---HHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTC
T ss_pred EEECCChH-HHHHHHHHHHHhcCCCCeEEEeCCCC---HHHHhhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccC
Confidence 99999986 45678889999999999976665431 111221 0112355555 567665553 10 13
Q ss_pred CC-ccc-cCC--CHHHHHHHHHHHHHHhcc
Q 011394 144 GP-SLM-PGG--SFEAYKYIEDILLKVAAQ 169 (487)
Q Consensus 144 G~-~i~-~gg--~~~~~~~v~~ll~~ig~~ 169 (487)
|. +++ +.. +.++.+.+..++..+|..
T Consensus 201 Gv~~liAv~qd~tgea~e~alala~aiG~~ 230 (525)
T 3fr7_A 201 GINSSFAVHQDVDGRATDVALGWSVALGSP 230 (525)
T ss_dssp SCCEEEEEEECSSSCHHHHHHHHHHHTTCS
T ss_pred CccEEEEcCCCCCHHHHHHHHHHHHHCCCC
Confidence 44 233 333 347889999999999963
No 112
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.14 E-value=1.9e-10 Score=122.19 Aligned_cols=150 Identities=17% Similarity=0.179 Sum_probs=108.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||..+|++|...|++|++||+++.. +...+.+ +..+ +++++++. +|+|++++|...++
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g-------~~~~-~l~e~~~~---aDvV~l~~P~~~~t 210 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLG-------IELL-SLDDLLAR---ADFISVHLPKTPET 210 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHT-------CEEC-CHHHHHHH---CSEEEECCCCSTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcC-------cEEc-CHHHHHhc---CCEEEECCCCchHH
Confidence 68999999999999999999999999999998753 3333322 3333 78898888 99999999988677
Q ss_pred HHHHHH-HhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhh----cCCC-ccc---cC-CCHHHHH
Q 011394 88 DETIKT-LSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGA----RHGP-SLM---PG-GSFEAYK 157 (487)
Q Consensus 88 ~~vl~~-l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a----~~G~-~i~---~g-g~~~~~~ 157 (487)
..++.+ +++.+++|.+|||++++.+.+...+.+.+.+..+......++++++.+ ...+ .++ .+ .+.++.+
T Consensus 211 ~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~ 290 (529)
T 1ygy_A 211 AGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQD 290 (529)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHH
T ss_pred HHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHH
Confidence 777754 778899999999999999988888888887654443333344443322 2334 332 24 3666666
Q ss_pred H-----HHHHHHHHhcc
Q 011394 158 Y-----IEDILLKVAAQ 169 (487)
Q Consensus 158 ~-----v~~ll~~ig~~ 169 (487)
+ ++.+.+.++..
T Consensus 291 ~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 291 RAGTDVAESVRLALAGE 307 (529)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 4 55666666543
No 113
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.14 E-value=1.6e-11 Score=121.57 Aligned_cols=119 Identities=20% Similarity=0.271 Sum_probs=95.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|++|||+++..+.+. ......+++++++. +|+|++++|...++
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---------~~~~~~~l~ell~~---aDiV~l~~Plt~~t 207 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVE---------SYVGREELRAFLNQ---TRVLINLLPNTAQT 207 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCE---------EEESHHHHHHHHHT---CSEEEECCCCCGGG
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhh---------hhcccCCHHHHHhh---CCEEEEecCCchhh
Confidence 5899999999999999999999999999999876432110 01123578888887 99999999987777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
+.++ .+.+..+++|.++||++.+...+...+.+.+.+..+......|+..+
T Consensus 208 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~E 259 (315)
T 3pp8_A 208 VGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQE 259 (315)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSS
T ss_pred hhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCC
Confidence 7777 67788899999999999999999999999998876654444555443
No 114
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.14 E-value=1.1e-10 Score=116.73 Aligned_cols=109 Identities=13% Similarity=0.076 Sum_probs=90.4
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||..+|++|...|++|++|||++++. ...+.+ +. ..+++++++. +|+|++++|...++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g-------~~-~~~l~ell~~---aDvV~l~~P~t~~t 233 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSASFG-------VQ-QLPLEEIWPL---CDFITVHTPLLPST 233 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHHHTT-------CE-ECCHHHHGGG---CSEEEECCCCCTTT
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhhhcC-------ce-eCCHHHHHhc---CCEEEEecCCCHHH
Confidence 589999999999999999999999999999987652 222222 22 3488898887 99999999988777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (487)
+.++ .+.++.+++|.++||++++.+.+...+.+.+.+..+.
T Consensus 234 ~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 234 TGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp TTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred HHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCcc
Confidence 7777 5678889999999999999988888888888876544
No 115
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.14 E-value=2.6e-10 Score=114.88 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=93.1
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|+++...|++|.+||+++.. +...+.+ +. ..+++++++. +|+|++++|...++
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g-------~~-~~~l~ell~~---aDvV~l~~Plt~~T 244 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLEENG-------VE-PASLEDVLTK---SDFIFVVAAVTSEN 244 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHHHTT-------CE-ECCHHHHHHS---CSEEEECSCSSCC-
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHhhcC-------ee-eCCHHHHHhc---CCEEEEcCcCCHHH
Confidence 58999999999999999999999999999998633 3333322 23 4589999987 99999999988788
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg 137 (487)
+.++ .+.+..+++|.++||++.+...+...+.+.+++..+. ....|+..
T Consensus 245 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~ 294 (365)
T 4hy3_A 245 KRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPE 294 (365)
T ss_dssp --CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSS
T ss_pred HhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCC
Confidence 8877 6778889999999999999999999999998877665 34455544
No 116
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.14 E-value=1.2e-10 Score=116.60 Aligned_cols=118 Identities=17% Similarity=0.225 Sum_probs=94.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|+++...|++|.+|||+++.. .+. ... ..+++++++. +|+|++++|....+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~-------~~~-~~~l~ell~~---aDvV~l~~Plt~~t 214 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE---FEP-------FLT-YTDFDTVLKE---ADIVSLHTPLFPST 214 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG---GTT-------TCE-ECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh---hhc-------ccc-ccCHHHHHhc---CCEEEEcCCCCHHH
Confidence 589999999999999999999999999999997641 111 122 3489999988 99999999987666
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~ 139 (487)
+.++ .+.+..+++|.++||++++...+...+.+.+.+..+.....-|+..++
T Consensus 215 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 267 (343)
T 2yq5_A 215 ENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGES 267 (343)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGG
T ss_pred HHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCC
Confidence 6666 566778999999999999999999999999988766544444444433
No 117
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.13 E-value=7.1e-11 Score=120.13 Aligned_cols=119 Identities=12% Similarity=0.063 Sum_probs=94.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|.+|||++.+.+...+.+ +..+.+++++++. +|+|++++|...++
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G-------~~~~~~l~ell~~---aDvV~l~~Plt~~t 261 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN-------LTWHATREDMYPV---CDVVTLNCPLHPET 261 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHGGG---CSEEEECSCCCTTT
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcC-------ceecCCHHHHHhc---CCEEEEecCCchHH
Confidence 5899999999999999999999999999999876544333322 3445689999887 99999999987677
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsg 136 (487)
+.++ .+.++.+++|.++||++++...+...+.+.+.+..+.....-|+.
T Consensus 262 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~ 311 (393)
T 2nac_A 262 EHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWF 311 (393)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCS
T ss_pred HHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecC
Confidence 7777 567788999999999999988888888888877654433333443
No 118
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.12 E-value=1e-10 Score=118.38 Aligned_cols=118 Identities=15% Similarity=0.107 Sum_probs=95.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCc-EEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFP-ISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
++|||||+|.||..+|++|...|++ |++|||++.+.+...+.+ +....+++++++. +|+|++++|....
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g-------~~~~~~l~ell~~---aDvV~l~~P~t~~ 234 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVG-------ARRVENIEELVAQ---ADIVTVNAPLHAG 234 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTT-------EEECSSHHHHHHT---CSEEEECCCCSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcC-------cEecCCHHHHHhc---CCEEEECCCCChH
Confidence 5899999999999999999999997 999999876555433322 3445689999887 9999999998877
Q ss_pred HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCC
Q 011394 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVS 135 (487)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvs 135 (487)
++.++ +..++.+++|.++||++++.+.+...+.+.+.+.++.....-|+
T Consensus 235 t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf 284 (364)
T 2j6i_A 235 TKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVW 284 (364)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred HHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecC
Confidence 77777 56778899999999999999889989999888876544333344
No 119
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.10 E-value=9e-11 Score=115.79 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=92.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|.+|||+++ +. + .....+++++++. +|+|++++|....+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~----~-------~~~~~~l~ell~~---aDvV~l~~P~~~~t 188 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG----P-------WRFTNSLEEALRE---ARAAVCALPLNKHT 188 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS----S-------SCCBSCSHHHHTT---CSEEEECCCCSTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc----C-------cccCCCHHHHHhh---CCEEEEeCcCchHH
Confidence 5899999999999999999999999999999876 11 1 1245688898887 99999999988777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCC
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVS 135 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvs 135 (487)
+.++ .+.++.+++|.++||+|++.+.+...+.+.+.+..+.....-|+
T Consensus 189 ~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~ 237 (303)
T 1qp8_A 189 RGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVW 237 (303)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCC
T ss_pred HHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccC
Confidence 7777 46788899999999999999888888888888766544434444
No 120
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.07 E-value=1.3e-10 Score=118.53 Aligned_cols=117 Identities=15% Similarity=0.192 Sum_probs=91.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|+++...|++|.+||+++.... . ......+++++++. +|+|++++|...++
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~-----~------~~~~~~sl~ell~~---aDvV~lhvPlt~~T 222 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY-----G------NVKPAASLDELLKT---SDVVSLHVPSSKST 222 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB-----T------TBEECSSHHHHHHH---CSEEEECCCC----
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc-----c------CcEecCCHHHHHhh---CCEEEEeCCCCHHH
Confidence 5899999999999999999999999999999754210 0 13456799999998 99999999987777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
+.++ .+.+..+++|.++||+|++.+.+...+.+.+++..+......|+..+
T Consensus 223 ~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~E 274 (416)
T 3k5p_A 223 SKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVE 274 (416)
T ss_dssp -CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSC
T ss_pred hhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCC
Confidence 7766 56778899999999999999999999999988766554444555443
No 121
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.07 E-value=1.4e-10 Score=117.12 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=96.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh-
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP- 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~- 86 (487)
++|||||+|.||+.+|++|...|++|.+||++.+... . .....+++++++. +|+|++++|....
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-----~-------~~~~~sl~ell~~---aDiV~l~~Plt~~g 184 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG-----D-------EGDFRTLDELVQE---ADVLTFHTPLYKDG 184 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT-----C-------CSCBCCHHHHHHH---CSEEEECCCCCCSS
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc-----c-------CcccCCHHHHHhh---CCEEEEcCcCCccc
Confidence 5899999999999999999999999999998543211 1 1246789999988 9999999997766
Q ss_pred ---HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChh
Q 011394 87 ---VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (487)
Q Consensus 87 ---v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~ 139 (487)
++.++ .+.+..+++|.++||+|.+.+.+...+.+.+++.++......|+..++
T Consensus 185 ~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP 241 (381)
T 3oet_A 185 PYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEP 241 (381)
T ss_dssp TTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTT
T ss_pred cccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCC
Confidence 66666 566778999999999999999999999999988877777777776543
No 122
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.06 E-value=3.9e-10 Score=112.81 Aligned_cols=117 Identities=15% Similarity=0.150 Sum_probs=94.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||..+|+++...|++|++|||++++. + +.. +....+++++++. +|+|++++|...++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-------~~~~~~l~ell~~---aDvV~l~~p~~~~t 213 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EKK-------GYYVDSLDDLYKQ---ADVISLHVPDVPAN 213 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HHT-------TCBCSCHHHHHHH---CSEEEECSCCCGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hhh-------CeecCCHHHHHhh---CCEEEEcCCCcHHH
Confidence 589999999999999999999999999999998764 2 222 2334589999887 99999999987777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg 137 (487)
+.++ +..++.+++|.++|+++++.+.+...+.+.+++..+.....-|+-.
T Consensus 214 ~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~ 264 (333)
T 1j4a_A 214 VHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEG 264 (333)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTT
T ss_pred HHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCC
Confidence 7666 4566788999999999999999999999999887665444444443
No 123
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.03 E-value=2.1e-10 Score=117.46 Aligned_cols=107 Identities=14% Similarity=0.218 Sum_probs=90.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|+++...|++|.+|||++... .+ .+....+++|+++. +|+|++++|...++
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-----~~------~~~~~~~l~ell~~---aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP-----LG------NATQVQHLSDLLNM---SDVVSLHVPENPST 211 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC-----CT------TCEECSCHHHHHHH---CSEEEECCCSSTTT
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc-----cC------CceecCCHHHHHhc---CCEEEEccCCChHH
Confidence 589999999999999999999999999999976531 11 13456789999988 99999999988777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (487)
+.++ .+.+..+++|.++||+|++.+.+...+.+.+++..+.
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~ 253 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLA 253 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEE
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCcc
Confidence 7777 5677889999999999999999998888888775443
No 124
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.03 E-value=2.2e-10 Score=113.43 Aligned_cols=112 Identities=18% Similarity=0.233 Sum_probs=89.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|||||+|.||..+|++|...|++|++|||++++.. . ...+++++++. +|+|++++|....
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----~---------~~~~l~ell~~---aDvV~l~~p~~~~ 206 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-----Y---------PFLSLEELLKE---ADVVSLHTPLTPE 206 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----S---------CBCCHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-----c---------ccCCHHHHHhh---CCEEEEeCCCChH
Confidence 35899999999999999999999999999999876532 1 14578898887 9999999998866
Q ss_pred HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011394 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (487)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsg 136 (487)
++.++ .+.++.+++|.++||++++.+.+...+.+.+. ..+.....-+++
T Consensus 207 t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~ 256 (311)
T 2cuk_A 207 THRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTD 256 (311)
T ss_dssp TTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCS
T ss_pred HHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCC
Confidence 77766 35677899999999999998888888888887 554433333443
No 125
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.99 E-value=5.5e-10 Score=113.02 Aligned_cols=115 Identities=14% Similarity=0.177 Sum_probs=92.8
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh-
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP- 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~- 86 (487)
++|||||+|.||..+|++|...|++|.+||++++.. ..+ . ...+++++++. +|+|++++|....
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g-------~-~~~~l~ell~~---aDvV~l~~Plt~~g 181 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPD-------G-EFVSLERLLAE---ADVISLHTPLNRDG 181 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STT-------S-CCCCHHHHHHH---CSEEEECCCCCSSS
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccC-------c-ccCCHHHHHHh---CCEEEEeccCcccc
Confidence 589999999999999999999999999999876532 111 1 24689999987 9999999998766
Q ss_pred ---HHHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011394 87 ---VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (487)
Q Consensus 87 ---v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg 137 (487)
+..++ .+.++.+++|.++||+|++.+.+...+.+.+.+.++.....-|+..
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~ 236 (380)
T 2o4c_A 182 EHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEG 236 (380)
T ss_dssp SSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTT
T ss_pred ccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeecc
Confidence 66666 4677889999999999999988998899988877665554455544
No 126
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.97 E-value=6.6e-10 Score=111.08 Aligned_cols=117 Identities=16% Similarity=0.142 Sum_probs=94.9
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|+++...|++|++|||++++. + +.. +. ..+++++++. +|+|++++|....+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-------~~-~~~l~ell~~---aDvV~~~~P~~~~t 211 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPD-------FD-YVSLEDLFKQ---SDVIDLHVPGIEQN 211 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTT-------CE-ECCHHHHHHH---CSEEEECCCCCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhc-------cc-cCCHHHHHhc---CCEEEEcCCCchhH
Confidence 589999999999999999999999999999987643 1 111 12 3488999887 99999999988777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
+.++ .+.++.+++|.++||+|++.+.+...+.+.+++.++.-...-|+-.+
T Consensus 212 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~E 263 (333)
T 1dxy_A 212 THIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYE 263 (333)
T ss_dssp TTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTH
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCC
Confidence 7766 56778899999999999999999999999888766655555555544
No 127
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.96 E-value=6.3e-10 Score=111.15 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=94.4
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||+.+|++|...|++|++|||++++. + +.. + ...+++++++. +|+|++++|....+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-------~-~~~~l~ell~~---aDvV~~~~p~t~~t 212 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDY-------C-TQVSLDEVLEK---SDIITIHAPYIKEN 212 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTT-------C-EECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhc-------c-ccCCHHHHHhh---CCEEEEecCCchHH
Confidence 589999999999999999999999999999987643 1 111 1 23488999887 99999999987666
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~ 138 (487)
+.++ .+.++.+++|.++||+|++.+.+...+.+.+.+.++.....-|+-.+
T Consensus 213 ~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~E 264 (331)
T 1xdw_A 213 GAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGE 264 (331)
T ss_dssp CCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTG
T ss_pred HHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCC
Confidence 6666 46778899999999999999999999999998876655555555444
No 128
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.95 E-value=1.2e-09 Score=94.93 Aligned_cols=104 Identities=19% Similarity=0.232 Sum_probs=82.9
Q ss_pred CcEEEEcc----cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
.+|+|||+ |.||..++++|.+.||+|+.+|++.+.+ . +...+.|++|+.+. +|++++++|+
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~-------G~~~~~s~~el~~~---vDlvii~vp~ 79 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----E-------GLKCYRSVRELPKD---VDVIVFVVPP 79 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----T-------TEECBSSGGGSCTT---CCEEEECSCH
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----C-------CeeecCCHHHhCCC---CCEEEEEeCH
Confidence 57999999 9999999999999999866666654322 1 35678899998876 9999999995
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM 132 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 132 (487)
..+.++++++.+ ...+.+|++.++. .+++.+.+++.|+.+++.
T Consensus 80 -~~v~~v~~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~~Gi~~igp 122 (138)
T 1y81_A 80 -KVGLQVAKEAVE-AGFKKLWFQPGAE----SEEIRRFLEKAGVEYSFG 122 (138)
T ss_dssp -HHHHHHHHHHHH-TTCCEEEECTTSC----CHHHHHHHHHHTCEEECS
T ss_pred -HHHHHHHHHHHH-cCCCEEEEcCccH----HHHHHHHHHHCCCEEEcC
Confidence 678888888776 4556788888774 456777778889999973
No 129
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.94 E-value=1.1e-08 Score=88.05 Aligned_cols=120 Identities=16% Similarity=0.159 Sum_probs=79.0
Q ss_pred CCCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHh-hcCCCcEEEEec
Q 011394 4 GKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVN-SIQKPRVIIMLV 81 (487)
Q Consensus 4 ~~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~-~l~~advIi~~v 81 (487)
|+..|+|.|||+|.+|..++..|.+.|++|+++|+++++.+.+.+..... -+.. ..+.+.+.+ .++++|+||+++
T Consensus 1 ~~~~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~---~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 1 GSHGMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL---VINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE---EEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcE---EEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 34457999999999999999999999999999999999888776531100 0111 123333322 245699999999
Q ss_pred CCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 82 KAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
|++ .....+..+.+.+.++.+|+..++.. . .+.+...|+.++-.|
T Consensus 78 ~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~--~----~~~l~~~g~~~v~~p 122 (140)
T 1lss_A 78 GKE-EVNLMSSLLAKSYGINKTIARISEIE--Y----KDVFERLGVDVVVSP 122 (140)
T ss_dssp SCH-HHHHHHHHHHHHTTCCCEEEECSSTT--H----HHHHHHTTCSEEECH
T ss_pred CCc-hHHHHHHHHHHHcCCCEEEEEecCHh--H----HHHHHHcCCCEEECH
Confidence 876 34444445556677778887655432 2 234556788777666
No 130
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.94 E-value=1.7e-09 Score=104.46 Aligned_cols=108 Identities=18% Similarity=0.161 Sum_probs=83.0
Q ss_pred cEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh--
Q 011394 9 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP-- 86 (487)
Q Consensus 9 kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~-- 86 (487)
+|+|||+|.||.+++..|.+.|++|++|||++++.+++.+... .. ..+++++ +. +|+||+++|.+..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~------~~-~~~~~~~-~~---~Divi~~tp~~~~~~ 186 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG------LR-AVPLEKA-RE---ARLLVNATRVGLEDP 186 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT------CE-ECCGGGG-GG---CSEEEECSSTTTTCT
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cc-hhhHhhc-cC---CCEEEEccCCCCCCC
Confidence 7999999999999999999999999999999999888876542 22 4567777 66 9999999998731
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
+..++. .+.+++|.+|+|+++. |..+ ++.+.++++|..+++
T Consensus 187 ~~~~l~--~~~l~~g~~viD~~~~-p~~t-~l~~~a~~~g~~~v~ 227 (263)
T 2d5c_A 187 SASPLP--AELFPEEGAAVDLVYR-PLWT-RFLREAKAKGLKVQT 227 (263)
T ss_dssp TCCSSC--GGGSCSSSEEEESCCS-SSSC-HHHHHHHHTTCEEEC
T ss_pred CCCCCC--HHHcCCCCEEEEeecC-Cccc-HHHHHHHHCcCEEEC
Confidence 112221 3567889999999886 4444 466667777887763
No 131
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.90 E-value=2.5e-09 Score=105.42 Aligned_cols=138 Identities=17% Similarity=0.169 Sum_probs=94.8
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|+|||+|.||..+|+.|...|++|++|||++++.+.+.+.+. ......+++++++. +|+|++++|... +
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~-----~~~~~~~l~~~l~~---aDvVi~~~p~~~-i 228 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGL-----VPFHTDELKEHVKD---IDICINTIPSMI-L 228 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC-----EEEEGGGHHHHSTT---CSEEEECCSSCC-B
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC-----eEEchhhHHHHhhC---CCEEEECCChhh-h
Confidence 58999999999999999999999999999999988766554321 11113467777665 999999999752 2
Q ss_pred HHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC-CCCChhhhcCCCccccCCCHHHHHHHHHHHHHH
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG-VSGGEEGARHGPSLMPGGSFEAYKYIEDILLKV 166 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p-vsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~i 166 (487)
. +.....++++.++||++....... + +.....|+.++++| +.|....+..+. -..+.+.+++..+
T Consensus 229 ~---~~~~~~mk~g~~lin~a~g~~~~~--~-~~a~~~G~~~i~~pg~~g~v~~a~a~~--------l~~~~~~~~l~~~ 294 (300)
T 2rir_A 229 N---QTVLSSMTPKTLILDLASRPGGTD--F-KYAEKQGIKALLAPGLPGIVAPKTAGQ--------ILANVLSKLLAEI 294 (300)
T ss_dssp C---HHHHTTSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECCCHHHHHCHHHHHH--------HHHHHHHHHHHHH
T ss_pred C---HHHHHhCCCCCEEEEEeCCCCCcC--H-HHHHHCCCEEEECCCCCCcHHHHHHHH--------HHHHHHHHHHHHh
Confidence 2 234567889999999998643332 2 44456799999888 444332222221 2245566677666
Q ss_pred hc
Q 011394 167 AA 168 (487)
Q Consensus 167 g~ 168 (487)
+.
T Consensus 295 ~~ 296 (300)
T 2rir_A 295 QA 296 (300)
T ss_dssp HH
T ss_pred cc
Confidence 53
No 132
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.88 E-value=1.3e-09 Score=106.07 Aligned_cols=110 Identities=19% Similarity=0.221 Sum_probs=81.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|+|||+|.||.+++..|.+.|++|++|||++++.+++.+.. ++...++++++++. +|+||.|+|.+..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~------g~~~~~~~~~~~~~---aDiVi~atp~~~~ 199 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF------PLEVVNSPEEVIDK---VQVIVNTTSVGLK 199 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS------CEEECSCGGGTGGG---CSEEEECSSTTSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc------CCeeehhHHhhhcC---CCEEEEeCCCCCC
Confidence 36899999999999999999999999999999999988776532 24445577777766 9999999998742
Q ss_pred --HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 87 --VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 87 --v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
+...+. .+.+.++.+|+|+++ ... ++.+..+++|..+++
T Consensus 200 ~~~~~~i~--~~~l~~g~~viDv~~-~~t---~ll~~a~~~g~~~v~ 240 (275)
T 2hk9_A 200 DEDPEIFN--YDLIKKDHVVVDIIY-KET---KLLKKAKEKGAKLLD 240 (275)
T ss_dssp TTCCCSSC--GGGCCTTSEEEESSS-SCC---HHHHHHHHTTCEEEC
T ss_pred CCCCCCCC--HHHcCCCCEEEEcCC-ChH---HHHHHHHHCcCEEEC
Confidence 111221 345788999999998 322 244455567877764
No 133
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.84 E-value=2.6e-09 Score=93.73 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=81.9
Q ss_pred CCcEEEEcc----cHHHHHHHHHHHHCCCcEEEEeCCh--HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTT--SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~--~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
..+|+|||+ |.||..++++|.+.||+|+.+|++. +.+ . ++..+.|++|+... +|+++++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~-------G~~~~~sl~el~~~---~Dlvii~ 77 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----L-------GQQGYATLADVPEK---VDMVDVF 77 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----T-------TEECCSSTTTCSSC---CSEEECC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----C-------CeeccCCHHHcCCC---CCEEEEE
Confidence 357999999 8999999999999999977777664 221 1 35677888888765 9999999
Q ss_pred cCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 81 VKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
+|+ ..+.++++++.+ ...+.+|++.++. .+++.+.+++.|+.+++
T Consensus 78 vp~-~~v~~v~~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 78 RNS-EAAWGVAQEAIA-IGAKTLWLQLGVI----NEQAAVLAREAGLSVVM 122 (145)
T ss_dssp SCS-THHHHHHHHHHH-HTCCEEECCTTCC----CHHHHHHHHTTTCEEEC
T ss_pred eCH-HHHHHHHHHHHH-cCCCEEEEcCChH----HHHHHHHHHHcCCEEEc
Confidence 996 578888888776 4456788887655 45677778888999985
No 134
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.78 E-value=2.9e-08 Score=98.16 Aligned_cols=100 Identities=15% Similarity=0.077 Sum_probs=71.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC--CcEEEEeCChHHHHHHHHhhhhc---CCCCccc-cCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKKE---GDLPLFG-FRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~~~---g~~~~~~-~~s~~e~~~~l~~advIi~~ 80 (487)
||||+|||+|.||.++|..|+++| ++|.+||+++++++.+....... -...+.. ..++ +.++. +|+||++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~---aDvViia 76 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALAD---ADVVIST 76 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCC---CCEEEEe
Confidence 479999999999999999999999 79999999999887766432100 0001233 3455 44444 9999999
Q ss_pred cCCChh-------------------HHHHHHHHhhcccCCCEEEecCCCC
Q 011394 81 VKAGAP-------------------VDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 81 vp~~~~-------------------v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+|.+.. ++++++.+.++. ++.+||..+|..
T Consensus 77 v~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~ 125 (309)
T 1hyh_A 77 LGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPV 125 (309)
T ss_dssp CSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSH
T ss_pred cCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcH
Confidence 998653 456667777765 566777777643
No 135
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.77 E-value=7.9e-09 Score=90.26 Aligned_cols=92 Identities=21% Similarity=0.312 Sum_probs=73.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|+|||+|.||..++..|.+.|++|++|||++++.+++.+.... .....+++.++++. +|+||.++|.+..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~----~~~~~~~~~~~~~~---~Divi~at~~~~~ 93 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEY----EYVLINDIDSLIKN---NDVIITATSSKTP 93 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTC----EEEECSCHHHHHHT---CSEEEECSCCSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCC----ceEeecCHHHHhcC---CCEEEEeCCCCCc
Confidence 3589999999999999999999999999999999999888765421 23456788888877 9999999998643
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+ +. ...+.+|.+++|.+..
T Consensus 94 ~---~~--~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 94 I---VE--ERSLMPGKLFIDLGNP 112 (144)
T ss_dssp S---BC--GGGCCTTCEEEECCSS
T ss_pred E---ee--HHHcCCCCEEEEccCC
Confidence 2 11 2456789999998763
No 136
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.72 E-value=5.5e-09 Score=105.01 Aligned_cols=122 Identities=12% Similarity=0.111 Sum_probs=90.0
Q ss_pred CCCCcEEEEcccHHHHHHHHHHHH--CCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 5 KQLTRIGLAGLAVMGQNLALNIAE--KGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~lA~~L~~--~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
...++|+|||+|.||..++..|.. ...+|.+|||++++.+++.+......+..+..++++++++++ +|+|++|+|
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~---aDiVi~aTp 203 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKG---VDIITTVTA 203 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTT---CSEEEECCC
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhc---CCEEEEecc
Confidence 345689999999999999998864 346899999999999999876421000014567889998887 999999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
++. ...++. ...+++|.+|++.++..|. .+++...+..++..|+|..
T Consensus 204 s~~-~~pvl~--~~~l~~G~~V~~vgs~~p~-~~El~~~~~~~a~v~vD~~ 250 (350)
T 1x7d_A 204 DKA-YATIIT--PDMLEPGMHLNAVGGDCPG-KTELHADVLRNARVFVEYE 250 (350)
T ss_dssp CSS-EEEEEC--GGGCCTTCEEEECSCCBTT-BEEECHHHHHTSEEEESSH
T ss_pred CCC-CCceec--HHHcCCCCEEEECCCCCCC-ceeeCHHHHhcCcEEECCH
Confidence 862 122221 2467899999999998876 4455555666677888863
No 137
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.72 E-value=1.2e-07 Score=86.13 Aligned_cols=116 Identities=9% Similarity=0.086 Sum_probs=76.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhh--cCCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNS--IQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~~--l~~advIi~~vp~ 83 (487)
++|.|+|+|.||..+++.|.+. |++|+++|+++++++.+.+.+... +.. .++.+.+.+. ++++|+||+++|+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~----~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNV----ISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCE----EECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCE----EEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 5899999999999999999999 999999999999998877644210 111 1233333222 4569999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
+.....++..+ ..+.+...|+..++ .+.. .+.+.+.|+.++..|
T Consensus 116 ~~~~~~~~~~~-~~~~~~~~ii~~~~-~~~~----~~~l~~~G~~~vi~p 159 (183)
T 3c85_A 116 HQGNQTALEQL-QRRNYKGQIAAIAE-YPDQ----LEGLLESGVDAAFNI 159 (183)
T ss_dssp HHHHHHHHHHH-HHTTCCSEEEEEES-SHHH----HHHHHHHTCSEEEEH
T ss_pred hHHHHHHHHHH-HHHCCCCEEEEEEC-CHHH----HHHHHHcCCCEEEch
Confidence 65544444433 33444444444333 2222 234556688887766
No 138
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.72 E-value=5.2e-08 Score=95.58 Aligned_cols=113 Identities=17% Similarity=0.122 Sum_probs=81.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|+|||+|.||..+|+.|...|.+|++|||++++.+.+.+.+.. .....+++++++. +|+|++++|....-
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-----~~~~~~l~~~l~~---aDvVi~~~p~~~i~ 227 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGME-----PFHISKAAQELRD---VDVCINTIPALVVT 227 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSE-----EEEGGGHHHHTTT---CSEEEECCSSCCBC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCe-----ecChhhHHHHhcC---CCEEEECCChHHhC
Confidence 589999999999999999999999999999999877665433211 1112456666665 99999999975221
Q ss_pred HHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVS 135 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvs 135 (487)
+ .....++++.++||++....... + +.....|+.++.+|-.
T Consensus 228 ~----~~l~~mk~~~~lin~ar~~~~~~--~-~~a~~~Gv~~~~~~~l 268 (293)
T 3d4o_A 228 A----NVLAEMPSHTFVIDLASKPGGTD--F-RYAEKRGIKALLVPGL 268 (293)
T ss_dssp H----HHHHHSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECCCH
T ss_pred H----HHHHhcCCCCEEEEecCCCCCCC--H-HHHHHCCCEEEECCCC
Confidence 2 23456789999999997543321 2 4445668888777633
No 139
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.69 E-value=1.4e-07 Score=94.03 Aligned_cols=113 Identities=11% Similarity=0.076 Sum_probs=84.1
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
|+||||||+|.||..++..|.+. +++|. ++|+++++.+++.+.. ++. +++++++++. .++|+|++|+|+.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~------~~~-~~~~~~~l~~-~~~D~V~i~tp~~ 74 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAY------GCE-VRTIDAIEAA-ADIDAVVICTPTD 74 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT------TCE-ECCHHHHHHC-TTCCEEEECSCGG
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHh------CCC-cCCHHHHhcC-CCCCEEEEeCCch
Confidence 56999999999999999999986 67776 7999999998887754 255 8899999873 2389999999987
Q ss_pred hhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEe
Q 011394 85 APVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
...+.+... +..|+ ++++- .+..+.+.+++.+..++.|+.+..
T Consensus 75 ~h~~~~~~a----l~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 119 (331)
T 4hkt_A 75 THADLIERF----ARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMV 119 (331)
T ss_dssp GHHHHHHHH----HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHH----HHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 655544332 33455 44443 255667777788877777766553
No 140
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.67 E-value=2e-07 Score=80.73 Aligned_cols=117 Identities=11% Similarity=0.121 Sum_probs=75.2
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhh--cCCCcEEEEecCC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNS--IQKPRVIIMLVKA 83 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~--l~~advIi~~vp~ 83 (487)
.|++|.|+|+|.+|..++..|.+.|++|+++|+++++++.+.+.+... +....+..+..+. ++++|+||+++|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~----~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDA----VIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEE----EECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcE----EECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 467899999999999999999999999999999999998887654210 1111122233322 3469999999996
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
.. ....+-..+..+....+|.-..+. .. .+.+...|+..+-.|
T Consensus 81 ~~-~n~~~~~~a~~~~~~~iia~~~~~--~~----~~~l~~~G~~~vi~p 123 (141)
T 3llv_A 81 DE-FNLKILKALRSVSDVYAIVRVSSP--KK----KEEFEEAGANLVVLV 123 (141)
T ss_dssp HH-HHHHHHHHHHHHCCCCEEEEESCG--GG----HHHHHHTTCSEEEEH
T ss_pred HH-HHHHHHHHHHHhCCceEEEEEcCh--hH----HHHHHHcCCCEEECH
Confidence 53 333333333334455666655443 22 233456677665544
No 141
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.65 E-value=1.9e-07 Score=92.10 Aligned_cols=111 Identities=14% Similarity=0.180 Sum_probs=82.3
Q ss_pred CCcEEEEcccHHHHH-HHHHHHH-CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQN-LALNIAE-KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~-lA~~L~~-~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++||||||+|.||.. ++..|.+ .+++|. ++|+++++.+++.+... +..++++++++++ +|+|++|+|+
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~------~~~~~~~~~ll~~---~D~V~i~tp~ 76 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYR------IMPFDSIESLAKK---CDCIFLHSST 76 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHT------CCBCSCHHHHHTT---CSEEEECCCG
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC------CCCcCCHHHHHhc---CCEEEEeCCc
Confidence 468999999999996 8888887 467777 89999999998887642 3448899999885 9999999998
Q ss_pred ChhHHHHHHHHhhcccCCC-EEEe-cCCCCchhHHHHHHHHHHcCCeEE
Q 011394 84 GAPVDETIKTLSAYMEKGD-CIID-GGNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId-~st~~~~~~~~~~~~l~~~g~~~i 130 (487)
....+.+.. . +..|+ ++++ -.+..+.+.+++.+..++.|+.+.
T Consensus 77 ~~h~~~~~~-a---l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~ 121 (308)
T 3uuw_A 77 ETHYEIIKI-L---LNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLM 121 (308)
T ss_dssp GGHHHHHHH-H---HHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEE
T ss_pred HhHHHHHHH-H---HHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 865444333 2 34555 4444 345566777777777777776554
No 142
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.65 E-value=3.6e-08 Score=99.77 Aligned_cols=114 Identities=12% Similarity=0.129 Sum_probs=81.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|+|||+|.||..++..|++. ++|+++||++++++++.+..... ...+.-..++++++++ +|+||.|+|....
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~-~~d~~~~~~l~~ll~~---~DvVIn~~P~~~~ 90 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPL-KVDASNFDKLVEVMKE---FELVIGALPGFLG 90 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEE-ECCTTCHHHHHHHHTT---CSCEEECCCHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeE-EEecCCHHHHHHHHhC---CCEEEECCChhhh
Confidence 36899999999999999999998 99999999999998877543200 0001112334455554 9999999986533
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i 130 (487)
..+.. ..+..|..++|+|.. +..+.++.+.++++|+.++
T Consensus 91 -~~v~~---a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~~l 129 (365)
T 2z2v_A 91 -FKSIK---AAIKSKVDMVDVSFM-PENPLELRDEAEKAQVTIV 129 (365)
T ss_dssp -HHHHH---HHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCEEE
T ss_pred -HHHHH---HHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCEEE
Confidence 23333 345689999999876 4455567777788898877
No 143
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.65 E-value=1.9e-07 Score=77.75 Aligned_cols=107 Identities=11% Similarity=0.070 Sum_probs=72.7
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
++++|.|+|+|.||..++..|.+.| ++|+++||++++.+.+...+... -..-..+.+++.+.++.+|+||.++|..
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~~d~vi~~~~~~ 80 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVAT---KQVDAKDEAGLAKALGGFDAVISAAPFF 80 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEE---EECCTTCHHHHHHHTTTCSEEEECSCGG
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcE---EEecCCCHHHHHHHHcCCCEEEECCCch
Confidence 4568999999999999999999999 99999999999988776322110 0001223344444445699999999764
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHH
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREK 120 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~ 120 (487)
....+++.. ...|..++|.++.. ..++.+.+
T Consensus 81 -~~~~~~~~~---~~~g~~~~~~~~~~-~~~~~~~~ 111 (118)
T 3ic5_A 81 -LTPIIAKAA---KAAGAHYFDLTEDV-AATNAVRA 111 (118)
T ss_dssp -GHHHHHHHH---HHTTCEEECCCSCH-HHHHHHHH
T ss_pred -hhHHHHHHH---HHhCCCEEEecCcH-HHHHHHHH
Confidence 344444433 34678888887654 34444433
No 144
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.65 E-value=2.3e-07 Score=80.48 Aligned_cols=117 Identities=19% Similarity=0.260 Sum_probs=75.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~--~l~~advIi~~vp~~ 84 (487)
..+|.|+|+|.+|..+|+.|.+.|++|+++|+++++++.+.+.+... +....+..+... .++++|+||+++|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~----i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRA----VLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEE----EESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCE----EECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 35799999999999999999999999999999999998887654210 111122223322 234599999999986
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
.....++.. +..+.++..+|-..+. + ...+.+.+.|+..+-.|
T Consensus 83 ~~n~~~~~~-a~~~~~~~~iiar~~~-~----~~~~~l~~~G~d~vi~p 125 (140)
T 3fwz_A 83 YEAGEIVAS-ARAKNPDIEIIARAHY-D----DEVAYITERGANQVVMG 125 (140)
T ss_dssp HHHHHHHHH-HHHHCSSSEEEEEESS-H----HHHHHHHHTTCSEEEEH
T ss_pred HHHHHHHHH-HHHHCCCCeEEEEECC-H----HHHHHHHHCCCCEEECc
Confidence 443333333 3334444444443332 1 23345566788766555
No 145
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.62 E-value=1.8e-07 Score=93.78 Aligned_cols=114 Identities=15% Similarity=0.152 Sum_probs=83.0
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
+++||||||+|.||..++..|.+. +++|. ++|+++++++++.+.. +...+++++++++. .++|+|++|+|+
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~~~~l~~-~~~D~V~i~tp~ 75 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEAN------GAEAVASPDEVFAR-DDIDGIVIGSPT 75 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTT------TCEEESSHHHHTTC-SCCCEEEECSCG
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc------CCceeCCHHHHhcC-CCCCEEEEeCCc
Confidence 356999999999999999999986 67766 7999999988887653 24678899999873 238999999998
Q ss_pred ChhHHHHHHHHhhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011394 84 GAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i 130 (487)
....+.+... +..|+ ++++.- +..+...+++.+..++.|+.+.
T Consensus 76 ~~h~~~~~~a----l~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~ 120 (344)
T 3euw_A 76 STHVDLITRA----VERGIPALCEKPIDLDIEMVRACKEKIGDGASKVM 120 (344)
T ss_dssp GGHHHHHHHH----HHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEE
T ss_pred hhhHHHHHHH----HHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEE
Confidence 7655544332 23444 555543 4555667777777666665444
No 146
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.62 E-value=2.7e-07 Score=92.89 Aligned_cols=114 Identities=15% Similarity=0.185 Sum_probs=83.8
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHC--CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEK--GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~--G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
+++||||||+|.||..++..|.+. +++|. ++|+++++.+++.+.. ++..+++++++++. .++|+|++|+|
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~------~~~~~~~~~~ll~~-~~~D~V~i~tp 84 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT------GARGHASLTDMLAQ-TDADIVILTTP 84 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH------CCEEESCHHHHHHH-CCCSEEEECSC
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc------CCceeCCHHHHhcC-CCCCEEEECCC
Confidence 346899999999999999999987 67755 8999999998887754 25678999999873 34899999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEe-c-CCCCchhHHHHHHHHHHcCCeEE
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIID-G-GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId-~-st~~~~~~~~~~~~l~~~g~~~i 130 (487)
+....+.+.. .+..|+.|+. - -+..+.+.+++.+..++.|..+.
T Consensus 85 ~~~h~~~~~~----al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~ 130 (354)
T 3q2i_A 85 SGLHPTQSIE----CSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLF 130 (354)
T ss_dssp GGGHHHHHHH----HHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred cHHHHHHHHH----HHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 8765444333 2345655443 2 24455667777777777776554
No 147
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.61 E-value=1e-07 Score=94.55 Aligned_cols=100 Identities=14% Similarity=0.201 Sum_probs=70.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHh----hhhcC-CCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVER----AKKEG-DLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~----~~~~g-~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
.|||+|||+|.||.++|..|+.+|+ +|.+||+++++++..... ..... ..++..+++. +.++. +|+||++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~---aDiVi~a 79 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISG---SDVVIIT 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC---CCEEEEe
Confidence 4689999999999999999999999 999999999877653211 00000 0134445666 44444 9999999
Q ss_pred cCCC---------------hhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 81 VKAG---------------APVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 81 vp~~---------------~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
++.+ ..++++++.+.++. ++.+++..||..
T Consensus 80 vg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~ 124 (317)
T 2ewd_A 80 ASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPL 124 (317)
T ss_dssp CCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSH
T ss_pred CCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChH
Confidence 9432 12456667777765 688898888854
No 148
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.60 E-value=5.3e-08 Score=96.86 Aligned_cols=117 Identities=11% Similarity=0.117 Sum_probs=86.9
Q ss_pred CCCCcEEEEcccHHHHHHHHHHHH--CCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 5 KQLTRIGLAGLAVMGQNLALNIAE--KGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~lA~~L~~--~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
...++|+|||+|.||..++..|.+ ...+|.+|||++++.+++.+..... ...+. ++++++++ + +|+|++|+|
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~-~~~~~-~~~~~e~v-~---aDvVi~aTp 196 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDR-GISAS-VQPAEEAS-R---CDVLVTTTP 196 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHT-TCCEE-ECCHHHHT-S---SSEEEECCC
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhc-CceEE-ECCHHHHh-C---CCEEEEeeC
Confidence 345689999999999999999987 3468999999999999998764321 01245 77888888 7 999999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
.... ++. ...+++|.+|++.++..|. ..++...+..++..|+|.+
T Consensus 197 ~~~p---v~~--~~~l~~G~~V~~ig~~~p~-~~el~~~~~~~a~v~vD~~ 241 (322)
T 1omo_A 197 SRKP---VVK--AEWVEEGTHINAIGADGPG-KQELDVEILKKAKIVVDDL 241 (322)
T ss_dssp CSSC---CBC--GGGCCTTCEEEECSCCSTT-CCCBCHHHHHTEEEEESCH
T ss_pred CCCc---eec--HHHcCCCeEEEECCCCCCC-ccccCHHHHhcCeEEECCH
Confidence 8642 221 2467899999999888776 3344444445556788864
No 149
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.60 E-value=8.9e-08 Score=94.08 Aligned_cols=117 Identities=15% Similarity=0.094 Sum_probs=81.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.++|.|||+|.||.+++..|++.|. +|+++||++++++++.+..... .. . ..+.+++.+.+..+|+||.|+|.+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~--~~-~-~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDER--RS-A-YFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSS--SC-C-EECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhc--cC-c-eeeHHHHHhhhccCCEEEECCCCCC
Confidence 3589999999999999999999998 9999999999999888754210 00 1 1122333222334999999999764
Q ss_pred hH--HHH-HHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 86 PV--DET-IKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 86 ~v--~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
.- +.+ +. ...+.++.+++|+++. |..+. +.+..+++|..+++
T Consensus 217 ~~~~~~~~i~--~~~l~~~~~v~D~~y~-P~~T~-ll~~A~~~G~~~v~ 261 (297)
T 2egg_A 217 HPRVEVQPLS--LERLRPGVIVSDIIYN-PLETK-WLKEAKARGARVQN 261 (297)
T ss_dssp SSCCSCCSSC--CTTCCTTCEEEECCCS-SSSCH-HHHHHHHTTCEEEC
T ss_pred CCCCCCCCCC--HHHcCCCCEEEEcCCC-CCCCH-HHHHHHHCcCEEEC
Confidence 21 100 11 2346789999999984 66663 66677788887764
No 150
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.58 E-value=2.8e-07 Score=92.34 Aligned_cols=114 Identities=12% Similarity=0.199 Sum_probs=83.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
|+||||||+|.||..++..|.+. +++|. ++|+++++.+++.+.... ...+++++++++. .++|+|++|+|+.
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~-~~~D~V~i~tp~~ 75 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGV-----EKAYKDPHELIED-PNVDAVLVCSSTN 75 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTC-----SEEESSHHHHHHC-TTCCEEEECSCGG
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCC-----CceeCCHHHHhcC-CCCCEEEEcCCCc
Confidence 46999999999999999999885 56765 789999999888776421 2468899999883 2389999999987
Q ss_pred hhHHHHHHHHhhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011394 85 APVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i 130 (487)
...+.+... +..|+ ++++-- +..+.+.+++.+..++.|+.+.
T Consensus 76 ~h~~~~~~a----l~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~ 119 (344)
T 3ezy_A 76 THSELVIAC----AKAKKHVFCEKPLSLNLADVDRMIEETKKADVILF 119 (344)
T ss_dssp GHHHHHHHH----HHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEE
T ss_pred chHHHHHHH----HhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEE
Confidence 654444332 33555 555532 5566777778777777776554
No 151
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.58 E-value=2.1e-07 Score=92.40 Aligned_cols=98 Identities=17% Similarity=0.273 Sum_probs=68.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhh---c-CCCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKK---E-GDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~---~-g~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
|||+|||+|.||.++|..|+.+|+ +|.+||+++++++.+...... . ...++.. ++. +.++ ++|+||+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~d~-~~~~---~aDvViiav 75 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-GDY-ADLK---GSDVVIVAA 75 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-CCG-GGGT---TCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe-CCH-HHhC---CCCEEEEcc
Confidence 589999999999999999999999 999999999888775532110 0 0001222 233 3334 499999999
Q ss_pred CCChh---------------HHHHHHHHhhcccCCCEEEecCCCC
Q 011394 82 KAGAP---------------VDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 82 p~~~~---------------v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
|.+.. ++++++.+.++. ++.++|..||..
T Consensus 76 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~ 119 (319)
T 1a5z_A 76 GVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPV 119 (319)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcH
Confidence 97531 456666776664 667777777643
No 152
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.58 E-value=3.6e-07 Score=91.90 Aligned_cols=114 Identities=15% Similarity=0.223 Sum_probs=84.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
++||||||+|.||..++..|.+. +++|. ++|+++++.+++.+... +..+++++++++. .++|+|++|+|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g------~~~~~~~~~~l~~-~~~D~V~i~tp~~ 77 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYN------CAGDATMEALLAR-EDVEMVIITVPND 77 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHT------CCCCSSHHHHHHC-SSCCEEEECSCTT
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC------CCCcCCHHHHhcC-CCCCEEEEeCChH
Confidence 45899999999999999999987 77755 88999999988876542 4568899999853 2489999999998
Q ss_pred hhHHHHHHHHhhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEEe
Q 011394 85 APVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
...+.+... +..|+ ++++-- +..+.+.+++.+..+++|+.+..
T Consensus 78 ~h~~~~~~a----l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v 122 (354)
T 3db2_A 78 KHAEVIEQC----ARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLC 122 (354)
T ss_dssp SHHHHHHHH----HHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHH----HHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 665544433 33555 455432 45566777777777777765543
No 153
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.57 E-value=3.3e-07 Score=91.32 Aligned_cols=116 Identities=9% Similarity=0.158 Sum_probs=85.0
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcEEEEecC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~-~~~~s~~e~~~~l~~advIi~~vp 82 (487)
+++||||||+|.||..++..|.+. +++|. ++|+++++.+++.+... + ..+++++++++. .++|+|++|+|
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~------~~~~~~~~~~ll~~-~~~D~V~i~tp 76 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELA------IPVAYGSYEELCKD-ETIDIIYIPTY 76 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTT------CCCCBSSHHHHHHC-TTCSEEEECCC
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcC------CCceeCCHHHHhcC-CCCCEEEEcCC
Confidence 346899999999999999999985 66766 78999999988877642 3 467899999873 23899999999
Q ss_pred CChhHHHHHHHHhhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEEec
Q 011394 83 AGAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYLGM 132 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i~~ 132 (487)
+....+.+... +..|+ ++++-- +..+.+.+++.+..++.|+.+...
T Consensus 77 ~~~h~~~~~~a----l~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 77 NQGHYSAAKLA----LSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp GGGHHHHHHHH----HHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHH----HHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 88655544332 33454 666543 455667777777777777765443
No 154
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.56 E-value=1.7e-07 Score=93.53 Aligned_cols=119 Identities=18% Similarity=0.227 Sum_probs=94.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.+|+.+|+.+..-|.+|.+||+.+... ..+.+ ....+++++.++ +|+|++.+|-....
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~--~~~~~--------~~~~~l~ell~~---sDivslh~Plt~~T 208 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED--LKEKG--------CVYTSLDELLKE---SDVISLHVPYTKET 208 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHTT--------CEECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchh--hhhcC--------ceecCHHHHHhh---CCEEEEcCCCChhh
Confidence 479999999999999999999999999999876432 22221 235689999998 99999999988777
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCChh
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~ 139 (487)
+.++ .+.+..+++|.++|+++-+..-+...+.+.+++..+.....-|+-.++
T Consensus 209 ~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EP 261 (334)
T 3kb6_A 209 HHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEE 261 (334)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHH
T ss_pred ccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCC
Confidence 7777 566778999999999999988888888888877655544445655544
No 155
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.55 E-value=5.2e-07 Score=89.99 Aligned_cols=102 Identities=11% Similarity=0.145 Sum_probs=72.5
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhh----hcC-CCCccccCCHHHHHhhcCCCcEEEE
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAK----KEG-DLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~----~~g-~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
..|||+|||+|.||.++|..|+..|+ +|.+||+++++++....... ... ..++..++++++.+++ +|+||+
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~---aDiVi~ 84 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTG---ADCVIV 84 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTT---CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCC---CCEEEE
Confidence 34799999999999999999999998 99999999987766322110 000 1145566788866665 999999
Q ss_pred ec--CCCh------------------hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 80 LV--KAGA------------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 80 ~v--p~~~------------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
++ |... .++++.+.+.++. ++.++|..||..
T Consensus 85 a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~ 135 (331)
T 1pzg_A 85 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPL 135 (331)
T ss_dssp CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred ccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCch
Confidence 98 4211 1455666777665 677887776643
No 156
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.55 E-value=4.3e-07 Score=90.44 Aligned_cols=99 Identities=14% Similarity=0.237 Sum_probs=69.1
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhh----hhc-CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERA----KKE-GDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~----~~~-g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
++||+|||+|.||.++|..|+.+|+ +|.+||+++++++...... ... ...+++.+++. +.+++ +|+||++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~---aD~VI~a 89 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN---SDVVIIT 89 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC---CCEEEEc
Confidence 4689999999999999999999999 9999999998876532111 000 01135555666 44444 9999999
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+. .++++.+++.+.. ++.++|..||.
T Consensus 90 vg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP 133 (328)
T 2hjr_A 90 AGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNP 133 (328)
T ss_dssp CSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred CCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCc
Confidence 84331 2445556676665 67777777773
No 157
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.54 E-value=4.8e-07 Score=90.60 Aligned_cols=119 Identities=12% Similarity=0.225 Sum_probs=81.2
Q ss_pred CCCCCCCCcEEEEcccHHHHHHHHHHH-H-CCCcE-EEEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcE
Q 011394 1 MVEGKQLTRIGLAGLAVMGQNLALNIA-E-KGFPI-SVYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRV 76 (487)
Q Consensus 1 ~~~~~~~~kIgiIGlG~mG~~lA~~L~-~-~G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~-~~~~s~~e~~~~l~~adv 76 (487)
|....+++||||||+|.||..++..|. + .+++| .++|+++++.+.+.+.. ++ ..+++++++++. .++|+
T Consensus 2 m~~~~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~------g~~~~~~~~~~~l~~-~~~D~ 74 (346)
T 3cea_A 2 MVTTRKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNEL------GVETTYTNYKDMIDT-ENIDA 74 (346)
T ss_dssp ---CCCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTT------CCSEEESCHHHHHTT-SCCSE
T ss_pred CCCCCCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHh------CCCcccCCHHHHhcC-CCCCE
Confidence 555556789999999999999999998 5 36774 58899999988877643 23 467889998863 24899
Q ss_pred EEEecCCChhHHHHHHHHhhcccCCCEE-Eec-CCCCchhHHHHHHHHHHc-CCeEE
Q 011394 77 IIMLVKAGAPVDETIKTLSAYMEKGDCI-IDG-GNEWYENTERREKAMAEL-GLLYL 130 (487)
Q Consensus 77 Ii~~vp~~~~v~~vl~~l~~~l~~g~ii-Id~-st~~~~~~~~~~~~l~~~-g~~~i 130 (487)
|++|+|+....+.+.. .+..|+.| ++. .+..+.+.+++.+..++. |+.+.
T Consensus 75 V~i~tp~~~h~~~~~~----al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~ 127 (346)
T 3cea_A 75 IFIVAPTPFHPEMTIY----AMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQ 127 (346)
T ss_dssp EEECSCGGGHHHHHHH----HHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEE
T ss_pred EEEeCChHhHHHHHHH----HHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEE
Confidence 9999998755444433 23456644 442 334455666666666666 66554
No 158
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.50 E-value=8.6e-07 Score=89.10 Aligned_cols=113 Identities=13% Similarity=0.106 Sum_probs=83.3
Q ss_pred CCcEEEEcccHHHH-HHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQ-NLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~-~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++||||||+|.||. .++..|.+. +++|. ++|+++++.+++.++. ++..+++++++++. .+.|+|++|+|+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~~~ll~~-~~~D~V~i~tp~ 99 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF------GGEPVEGYPALLER-DDVDAVYVPLPA 99 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH------CSEEEESHHHHHTC-TTCSEEEECCCG
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc------CCCCcCCHHHHhcC-CCCCEEEECCCc
Confidence 35899999999998 799999887 67775 8899999998887754 24566899999863 348999999998
Q ss_pred ChhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011394 84 GAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i 130 (487)
....+.+... +..|+ ++++- -+..+.+.+++.+..++.|+.+.
T Consensus 100 ~~h~~~~~~a----l~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 144 (350)
T 3rc1_A 100 VLHAEWIDRA----LRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLM 144 (350)
T ss_dssp GGHHHHHHHH----HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHH----HHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 8655544332 34555 45543 24556777777777777777554
No 159
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.50 E-value=7.2e-07 Score=88.59 Aligned_cols=116 Identities=9% Similarity=0.164 Sum_probs=81.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
|+||||||+|.||..++..|.+. ++++ .++|+++++.+++.+... ....+++++++++ +++|+|++++|+.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~-----~~~~~~~~~~~l~--~~~D~V~i~tp~~ 73 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQ-----NIQLFDQLEVFFK--SSFDLVYIASPNS 73 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSS-----SCEEESCHHHHHT--SSCSEEEECSCGG
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcC-----CCeEeCCHHHHhC--CCCCEEEEeCChH
Confidence 46899999999999999999886 4665 489999999887765431 1256789999881 2399999999987
Q ss_pred hhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 85 APVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
...+.+. . .+..|+ ++++. .+....+.+++.+..++.|+.+..+.
T Consensus 74 ~h~~~~~-~---al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~ 120 (325)
T 2ho3_A 74 LHFAQAK-A---ALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAA 120 (325)
T ss_dssp GHHHHHH-H---HHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHH-H---HHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 5444333 2 244566 55553 34455677777777777777665443
No 160
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.50 E-value=7.4e-07 Score=88.26 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=80.6
Q ss_pred CCcEEEEcccHHHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++||||||+|.||.. ++..|.+. +++|. ++|+++++.+++.+... +..+++.+++.. ++|+|++++|+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g------~~~~~~~~~l~~---~~D~V~i~tp~ 75 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWR------IPYADSLSSLAA---SCDAVFVHSST 75 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHT------CCBCSSHHHHHT---TCSEEEECSCT
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC------CCccCcHHHhhc---CCCEEEEeCCc
Confidence 468999999999997 88888764 67766 89999999888776542 345678887733 49999999998
Q ss_pred ChhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEe
Q 011394 84 GAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
....+.+.. .+..|+ ++++. .+..+.+.+++.+..++.|+.+..
T Consensus 76 ~~h~~~~~~----al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 76 ASHFDVVST----LLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp THHHHHHHH----HHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHH----HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 755443332 244566 55652 445567777777777777776543
No 161
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.50 E-value=6e-07 Score=88.72 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=66.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 8 TRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~----~-g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
|||+|||+|.||.++|..|+.+ |++|.+||+++++++........ . ...++..+++.++ ++. +|+||++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~---aDvViia 76 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TAN---SDIVIIT 76 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTT---CSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCC---CCEEEEe
Confidence 5899999999999999999985 79999999999887755321110 0 0012444566665 444 9999999
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 109 (487)
+|.+. .++++.+.+.++. ++.+|+..||
T Consensus 77 v~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tN 119 (310)
T 1guz_A 77 AGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSN 119 (310)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcC
Confidence 97642 1234445666664 5666666765
No 162
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.49 E-value=2.5e-07 Score=81.71 Aligned_cols=120 Identities=15% Similarity=0.164 Sum_probs=71.6
Q ss_pred CCCCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHH-HhhhhcCCCCccc-cCCHHHHHh-hcCCCcEEEE
Q 011394 3 EGKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETV-ERAKKEGDLPLFG-FRDPESFVN-SIQKPRVIIM 79 (487)
Q Consensus 3 ~~~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~~~g~~~~~~-~~s~~e~~~-~l~~advIi~ 79 (487)
+....++|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+. ..+.. -+.. ..+.+.+.+ .++.+|+||+
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~----~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF----TVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE----EEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc----EEEecCCCHHHHHHcCcccCCEEEE
Confidence 334457899999999999999999999999999999999876654 22210 0111 122332222 1345999999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
+++++. ....+..+...+.+...++-..+. +... +.+.+.|+. +-.|
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~~~~iv~~~~~-~~~~----~~l~~~G~~-vi~p 137 (155)
T 2g1u_A 91 FTNDDS-TNFFISMNARYMFNVENVIARVYD-PEKI----KIFEENGIK-TICP 137 (155)
T ss_dssp CSSCHH-HHHHHHHHHHHTSCCSEEEEECSS-GGGH----HHHHTTTCE-EECH
T ss_pred EeCCcH-HHHHHHHHHHHHCCCCeEEEEECC-HHHH----HHHHHCCCc-EEcH
Confidence 999864 333333444443344444443333 2332 234456766 4333
No 163
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.48 E-value=7.4e-07 Score=89.27 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=82.0
Q ss_pred CCcEEEEcccHHHHHHHHHHH-H-CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIA-E-KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~-~-~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++||||||+|.||..++..|. + .+++|. ++|+++++.+++.+.... ....+++++++++. .++|+|++|+|+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~----~~~~~~~~~~ll~~-~~~D~V~i~tp~ 76 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQL----NATVYPNDDSLLAD-ENVDAVLVTSWG 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTC----CCEEESSHHHHHHC-TTCCEEEECSCG
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCC----CCeeeCCHHHHhcC-CCCCEEEECCCc
Confidence 468999999999999999999 4 367765 789999999888775421 14578899999874 348999999998
Q ss_pred ChhHHHHHHHHhhcccCCCE-EEecC-CCCchhHHHHHHHHHHcCCeE
Q 011394 84 GAPVDETIKTLSAYMEKGDC-IIDGG-NEWYENTERREKAMAELGLLY 129 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~i-iId~s-t~~~~~~~~~~~~l~~~g~~~ 129 (487)
....+.+.. .+..|+. +++-- +..+.+.+++.+..++.|..+
T Consensus 77 ~~h~~~~~~----al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 77 PAHESSVLK----AIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp GGHHHHHHH----HHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred hhHHHHHHH----HHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 765544433 2445654 44432 445567777777777777644
No 164
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.47 E-value=1.6e-07 Score=92.82 Aligned_cols=117 Identities=13% Similarity=0.175 Sum_probs=82.1
Q ss_pred CCCCCcEEEEcccHHHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 4 GKQLTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 4 ~~~~~kIgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
.+...+|+|||+|.||..++..|.+. ..+|.+|||+ +.+++.++.....+..+..+ ++++++++ +|+|++|+
T Consensus 118 ~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~---aDIVi~aT 191 (313)
T 3hdj_A 118 RPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APADIAAQ---ADIVVTAT 191 (313)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHH---CSEEEECC
T ss_pred cCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhh---CCEEEEcc
Confidence 34456899999999999999999863 4589999999 66666553211001124556 99999988 99999999
Q ss_pred CCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcC-CeEEec
Q 011394 82 KAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELG-LLYLGM 132 (487)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g-~~~i~~ 132 (487)
|.... ++. .+.+++|.+|++.++..|.. +++...+-.+. ..|+|.
T Consensus 192 ~s~~p---vl~--~~~l~~G~~V~~vGs~~p~~-~El~~~~~~~a~~v~vD~ 237 (313)
T 3hdj_A 192 RSTTP---LFA--GQALRAGAFVGAIGSSLPHT-RELDDEALRRARAVVVEW 237 (313)
T ss_dssp CCSSC---SSC--GGGCCTTCEEEECCCSSTTC-CCCCHHHHHHCSEEEESC
T ss_pred CCCCc---ccC--HHHcCCCcEEEECCCCCCch-hhcCHHHHhcCCEEEECC
Confidence 98642 222 35688999999999988764 34433333333 467774
No 165
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.47 E-value=7.9e-07 Score=87.62 Aligned_cols=99 Identities=13% Similarity=0.224 Sum_probs=65.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCC--CCcccc-CCHHHHHhhcCCCcEEEEecC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGD--LPLFGF-RDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~g~--~~~~~~-~s~~e~~~~l~~advIi~~vp 82 (487)
|||+|||+|.||.++|..|+.+|+ +|.++|+++++++........... ...+.. ++. +. ++++|+||++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~a---~~~aDvVIi~~~ 76 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH-SE---LADAQVVILTAG 76 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG-GG---GTTCSEEEECC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH-HH---hCCCCEEEEcCC
Confidence 589999999999999999999999 999999999877654332211000 011121 233 23 345999999996
Q ss_pred CCh---------------hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 83 AGA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 83 ~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
.+. .++++++.+.++ .++.++|..||..
T Consensus 77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~ 119 (304)
T 2v6b_A 77 ANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPV 119 (304)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSH
T ss_pred CCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCch
Confidence 543 235555667776 4777887777754
No 166
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.47 E-value=1.6e-06 Score=86.24 Aligned_cols=115 Identities=12% Similarity=0.138 Sum_probs=82.4
Q ss_pred CcEEEEcccHHHHHH-HHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 8 TRIGLAGLAVMGQNL-ALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 8 ~kIgiIGlG~mG~~l-A~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~-~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
+||||||+|.||..+ +..|.+.+++|. ++|+++++.+++.++.. + ..+++++++++. .++|+|++++|+.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g------~~~~~~~~~~~l~~-~~~D~V~i~tp~~ 73 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENG------IGKSVTSVEELVGD-PDVDAVYVSTTNE 73 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTT------CSCCBSCHHHHHTC-TTCCEEEECSCGG
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcC------CCcccCCHHHHhcC-CCCCEEEEeCChh
Confidence 489999999999998 888888778765 88999999888776532 2 357889998763 2489999999987
Q ss_pred hhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 85 APVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
...+.+. . .+..|+ ++++. .+..+.+.+++.+..++.|+.+..+.
T Consensus 74 ~h~~~~~-~---al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~ 120 (332)
T 2glx_A 74 LHREQTL-A---AIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNH 120 (332)
T ss_dssp GHHHHHH-H---HHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred HhHHHHH-H---HHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEee
Confidence 5443333 2 244566 45542 34556677777777777777665543
No 167
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.46 E-value=2.8e-07 Score=96.89 Aligned_cols=116 Identities=9% Similarity=0.183 Sum_probs=85.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHH---HHHcCCCccchhhHHHHHHHHhhCCCCCCCc
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA---RIWKGGCIIRAVFLDRIKKAYDRNADLANLL 400 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~---~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll 400 (487)
.++++++|++||+++++.|+.++|++.+++++ .++|..++. ..|+.| .++|++++....++.+++.-....
T Consensus 183 ~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~-----lGl~~~~~~~~~~~w~~g-~~~S~l~~~~~~~l~~~d~~~~~~ 256 (497)
T 2p4q_A 183 AGAGHYVKMVHNGIEYGDMQLICEAYDIMKRL-----GGFTDKEISDVFAKWNNG-VLDSFLVEITRDILKFDDVDGKPL 256 (497)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCCHHHHHHHHHHHHTT-TTCBHHHHHHHHHHTCBCTTSSBG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHhcCC-ccccHHHHHHHHHHhcCCCCCccH
Confidence 48899999999999999999999999999862 237766555 558888 579999998877666532211233
Q ss_pred CChhHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCC
Q 011394 401 VDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA--YFDSYRRER 447 (487)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~--~~~~~~~~~ 447 (487)
++...+...+|+++ +|++..|.++|+|+|.+.++++ +++.++.+|
T Consensus 257 vd~i~D~~~~KgtG--~~~~~~A~~~Gv~~P~~~~av~ar~~s~~k~~r 303 (497)
T 2p4q_A 257 VEKIMDTAGQKGTG--KWTAINALDLGMPVTLIGEAVFARCLSALKNER 303 (497)
T ss_dssp GGGSCCCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHhhccchHH--HHHHHHHHHcCCCCchHHHHHHHHHhhcchhhH
Confidence 33333233346666 9999999999999999999984 444444444
No 168
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.45 E-value=1.1e-06 Score=87.31 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=68.9
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCcEEEE
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~----~-g~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
.++||+|||+|.||.++|..|+..|+ +|.++|+++++++........ . ...+++.+++. +.+++ +|+||+
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~---aD~Vi~ 78 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAG---ADVVIV 78 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTT---CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC---CCEEEE
Confidence 35799999999999999999999998 999999999877643322110 0 01135555666 44444 999999
Q ss_pred ecCCCh--------------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 80 LVKAGA--------------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 80 ~vp~~~--------------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+++.+. .++++.+.+.+.. ++.++|..||.
T Consensus 79 a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP 128 (322)
T 1t2d_A 79 TAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNP 128 (322)
T ss_dssp CCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSS
T ss_pred eCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 983321 2445556666665 67777777763
No 169
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.44 E-value=1.1e-06 Score=87.33 Aligned_cols=113 Identities=10% Similarity=0.067 Sum_probs=77.2
Q ss_pred CCcEEEEcccHHHH-HHHHHHHHC-CCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQ-NLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~-~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++||||||+|.||. .++..|.+. +++|.++|+++++.+++.++.. +.. +.+..+++. +++|+|++|+|+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g------~~~~~~~~~~~l~--~~~D~V~i~tp~ 73 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR------VSATCTDYRDVLQ--YGVDAVMIHAAT 73 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT------CCCCCSSTTGGGG--GCCSEEEECSCG
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcC------CCccccCHHHHhh--cCCCEEEEECCc
Confidence 46999999999998 499988775 6788899999999988876542 222 334444442 249999999998
Q ss_pred ChhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEe
Q 011394 84 GAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
....+.+.. . +..|+ ++++- .+..+.+.+++.+..++.|+.+..
T Consensus 74 ~~h~~~~~~-a---l~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 119 (323)
T 1xea_A 74 DVHSTLAAF-F---LHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYV 119 (323)
T ss_dssp GGHHHHHHH-H---HHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHH-H---HHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEE
Confidence 754443333 2 34565 56653 345556777777777777765543
No 170
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.44 E-value=6.4e-07 Score=90.59 Aligned_cols=125 Identities=14% Similarity=0.180 Sum_probs=86.1
Q ss_pred CCCCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCCcEEEEec
Q 011394 3 EGKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 3 ~~~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~~l~~advIi~~v 81 (487)
+|.+ |||.|||+|.+|+.++..|++ .++|.+.|++.++++.+.+.... +.. ..+.+++.+.++++|+||.|+
T Consensus 13 ~g~~-mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~-----~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 13 EGRH-MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATP-----LKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp ---C-CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEE-----EECCTTCHHHHHHHHTTCSEEEECC
T ss_pred cCCc-cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCc-----EEEecCCHHHHHHHHhCCCEEEEec
Confidence 4444 589999999999999999876 58999999999988876543211 111 234555544455699999999
Q ss_pred CCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE-ecCCCCChh
Q 011394 82 KAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL-GMGVSGGEE 139 (487)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i-~~pvsgg~~ 139 (487)
|.. .-..+++.. +..|..++|.|-.. ....++.+..++.|+.++ ++++..|..
T Consensus 86 p~~-~~~~v~~~~---~~~g~~yvD~s~~~-~~~~~l~~~a~~~g~~~i~~~G~~PG~~ 139 (365)
T 3abi_A 86 PGF-LGFKSIKAA---IKSKVDMVDVSFMP-ENPLELRDEAEKAQVTIVFDAGFAPGLS 139 (365)
T ss_dssp CGG-GHHHHHHHH---HHHTCEEEECCCCS-SCGGGGHHHHHHTTCEEECCCBTTTBHH
T ss_pred CCc-ccchHHHHH---HhcCcceEeeeccc-hhhhhhhhhhccCCceeeecCCCCCchH
Confidence 975 334454443 45788999987544 455566777778888777 567666543
No 171
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.43 E-value=5.6e-07 Score=89.12 Aligned_cols=101 Identities=15% Similarity=0.242 Sum_probs=67.7
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHH--HH-Hhhhhc-CCCCccccCCHHHHHhhcCCCcEEEE
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDE--TV-ERAKKE-GDLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~--l~-~~~~~~-g~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
.+|||+|||+|.||..+|..|+.+|+ +|+++|+++++++. +. ..+... +..++...++.+ .++ ++|+||+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~---~aD~Vii 81 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE-ICR---DADMVVI 81 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG-GGT---TCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHH-HhC---CCCEEEE
Confidence 45799999999999999999999999 99999999877752 21 121100 000122222433 333 4999999
Q ss_pred ecCCCh---------------hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+++.+. .+++++..+.+. .++.+||..+|..
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~ 127 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPV 127 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCch
Confidence 996542 122566667664 6788888888754
No 172
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.42 E-value=4.8e-07 Score=93.88 Aligned_cols=99 Identities=9% Similarity=0.003 Sum_probs=76.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||..+|+.+...|.+|++||+++.+..+....+ +. ..+++++++. +|+|++++.+...+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g-------~~-~~~l~ell~~---aDiVi~~~~t~~lI 326 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEG-------FN-VVTLDEIVDK---GDFFITCTGNVDVI 326 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTT-------CE-ECCHHHHTTT---CSEEEECCSSSSSB
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcC-------CE-ecCHHHHHhc---CCEEEECCChhhhc
Confidence 4799999999999999999999999999999998754433322 22 4578888876 99999997443222
Q ss_pred HHHHHHHhhcccCCCEEEecCCCCc-hhHHHHHH
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEWY-ENTERREK 120 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~ 120 (487)
. .+.+..+++|.+|||+++... -+...+.+
T Consensus 327 ~---~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 327 K---LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp C---HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred C---HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 1 355677899999999999987 36666655
No 173
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.42 E-value=8.7e-07 Score=76.30 Aligned_cols=100 Identities=12% Similarity=0.216 Sum_probs=63.5
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHh-hcCCCcEEEEecCC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVN-SIQKPRVIIMLVKA 83 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~-~l~~advIi~~vp~ 83 (487)
++++|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+.+.+.. -+.. ..+.+.+.+ .++.+|+||.+++.
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~----~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH----AVIANATEENELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSE----EEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCE----EEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence 34579999999999999999999999999999999887665433211 0111 123333322 13459999999987
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCC
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st 109 (487)
+......+......+.+..+|+..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 81 NIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred chHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 52333233333444555555554443
No 174
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.41 E-value=4.5e-07 Score=94.94 Aligned_cols=116 Identities=17% Similarity=0.300 Sum_probs=86.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHH---HHHHcCCCccchhhHHHHHHHHhh-CCCCCCC
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGEL---ARIWKGGCIIRAVFLDRIKKAYDR-NADLANL 399 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i---~~iw~~Gcii~s~ll~~~~~~~~~-~~~~~~l 399 (487)
.++++++|++||++++..++.++|++.+++++ .+++..++ +..|+.| .+.|++++....++.+ +......
T Consensus 179 ~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~-----~Gl~~~~~~~l~~~w~~g-~~~s~l~~~~~~~l~~~d~~~g~~ 252 (474)
T 2iz1_A 179 NGAGHYVKMVHNGIEYGDMQLIAESYDLLKRI-----LGLSNAEIQAIFEEWNEG-ELDSYLIEITKEVLKRKDDEGEGY 252 (474)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHTTT-TTCBHHHHHHHHHTTCBCSSSSSB
T ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHhcCC-CccccHHHhhhhHhhcCCCCCChh
Confidence 47899999999999999999999999999862 23666555 4558888 5789999988787653 3221124
Q ss_pred cCChhHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCC
Q 011394 400 LVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA--YFDSYRRER 447 (487)
Q Consensus 400 l~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~--~~~~~~~~~ 447 (487)
.++...+...+++++ +|++..|.++|+|+|.+.+++. +++.++.+|
T Consensus 253 ~vd~i~D~~~~k~tG--~~~~~~A~~~gv~~P~~~~av~ar~~s~~k~~r 300 (474)
T 2iz1_A 253 IVDKILDKAGNKGTG--KWTSESALDLGVPLPLITESVFARYISTYKDER 300 (474)
T ss_dssp GGGGBCSCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHhhcccchH--HHHHHHHHHcCCCCchHHHHHHHHHhhhhhhhh
Confidence 444444344556667 9999999999999999999974 555555444
No 175
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.40 E-value=1.4e-06 Score=87.72 Aligned_cols=113 Identities=13% Similarity=0.245 Sum_probs=81.6
Q ss_pred CcEEEEcccHHHHHHHHHHH-H-CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 8 TRIGLAGLAVMGQNLALNIA-E-KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~-~-~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
+||||||+|.||..++..|. + .+++|. ++|+++++++++.++... ....+++++++++. .+.|+|++|+|+.
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~----~~~~~~~~~~ll~~-~~~D~V~i~tp~~ 98 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAI----EAKDYNDYHDLIND-KDVEVVIITASNE 98 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTC----CCEEESSHHHHHHC-TTCCEEEECSCGG
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCC----CCeeeCCHHHHhcC-CCCCEEEEcCCcH
Confidence 48999999999999999998 4 367766 799999999888776421 14578899999874 3489999999988
Q ss_pred hhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeE
Q 011394 85 APVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLY 129 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~ 129 (487)
...+.+... +..|+ ++++- -+..+.+.+++.+..++.|..+
T Consensus 99 ~h~~~~~~a----l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 99 AHADVAVAA----LNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp GHHHHHHHH----HHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHH----HHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 655544332 34555 44442 2445567777777777777644
No 176
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.40 E-value=1.7e-06 Score=80.70 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=72.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHh-hcCCCcEEEEecCCCh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVN-SIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~-~l~~advIi~~vp~~~ 85 (487)
|||.|+|+|.+|..+|..|.+.|++|+++|+++++++.+.+..... -+.. ..+.+.+.+ .++++|+||++++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~---~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d- 76 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT---IIHGDGSHKEILRDAEVSKNDVVVILTPRD- 76 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE---EEESCTTSHHHHHHHTCCTTCEEEECCSCH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe---EEEcCCCCHHHHHhcCcccCCEEEEecCCc-
Confidence 6899999999999999999999999999999999998876542110 0111 123332222 256699999999886
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
.....+..++..+.+...+|-..+. +... +.+...|+..+-.|
T Consensus 77 ~~n~~~~~~a~~~~~~~~iia~~~~-~~~~----~~l~~~G~d~vi~p 119 (218)
T 3l4b_C 77 EVNLFIAQLVMKDFGVKRVVSLVND-PGNM----EIFKKMGITTVLNL 119 (218)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECCCS-GGGH----HHHHHHTCEECCCH
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeC-cchH----HHHHHCCCCEEECH
Confidence 3444444444443344444433332 2332 23344566554333
No 177
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.40 E-value=7.4e-08 Score=93.50 Aligned_cols=111 Identities=17% Similarity=0.076 Sum_probs=76.1
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.+++.|||+|.||.+++..|++.|. +|+++||++++.+++.+... .....++.+.+.. +|+||.++|.+.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~------~~~~~~~~~~~~~---aDiVInaTp~Gm 187 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNIN------KINLSHAESHLDE---FDIIINTTPAGM 187 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCE------EECHHHHHHTGGG---CSEEEECCC---
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcc------cccHhhHHHHhcC---CCEEEECccCCC
Confidence 3579999999999999999999999 99999999998776653211 1122334444444 999999998752
Q ss_pred h--HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011394 86 P--VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 86 ~--v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i 130 (487)
. .+..+ -...+.++.+|+|++.. |..| .+.+..+++|...+
T Consensus 188 ~~~~~~~l--~~~~l~~~~~V~D~vY~-P~~T-~ll~~A~~~G~~~~ 230 (277)
T 3don_A 188 NGNTDSVI--SLNRLASHTLVSDIVYN-PYKT-PILIEAEQRGNPIY 230 (277)
T ss_dssp ----CCSS--CCTTCCSSCEEEESCCS-SSSC-HHHHHHHHTTCCEE
T ss_pred CCCCcCCC--CHHHcCCCCEEEEecCC-CCCC-HHHHHHHHCcCEEe
Confidence 1 11111 12347789999999876 5555 46666778887654
No 178
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.39 E-value=2.7e-06 Score=84.81 Aligned_cols=115 Identities=10% Similarity=0.121 Sum_probs=82.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC---c-EEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF---P-ISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~---~-V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
++||||||+|.||..++..|.+.+. + |.++|+++++.+++.++... ...++++++++++ .+.|+|++++|
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~-----~~~~~~~~~ll~~-~~vD~V~i~tp 75 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDI-----PKAYGSYEELAKD-PNVEVAYVGTQ 75 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTC-----SCEESSHHHHHHC-TTCCEEEECCC
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCC-----CcccCCHHHHhcC-CCCCEEEECCC
Confidence 4699999999999999999987643 3 55789999999988876531 1468899999874 34899999999
Q ss_pred CChhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEe
Q 011394 83 AGAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
+....+.+... +..|+ ++++- -+....+.+++.+..+++|..+..
T Consensus 76 ~~~H~~~~~~a----l~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 76 HPQHKAAVMLC----LAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp GGGHHHHHHHH----HHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cHHHHHHHHHH----HhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 88665544332 34565 44442 244556777777777777765543
No 179
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.38 E-value=3.6e-07 Score=87.54 Aligned_cols=105 Identities=13% Similarity=0.134 Sum_probs=74.4
Q ss_pred cEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
+|+|||+|.||++++..|++.|. +|+++||++++.+++.+... .....++.+.++. +|+||.++|.+..-
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~------~~~~~~~~~~~~~---aDiVInatp~gm~p 180 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK------IFSLDQLDEVVKK---AKSLFNTTSVGMKG 180 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE------EEEGGGHHHHHHT---CSEEEECSSTTTTS
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc------cCCHHHHHhhhcC---CCEEEECCCCCCCC
Confidence 79999999999999999999998 99999999999877664321 1234566676666 99999999864110
Q ss_pred -HHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011394 88 -DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (487)
Q Consensus 88 -~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (487)
...+. .+.+.++.+|+|.... +. .+.+..+++|..
T Consensus 181 ~~~~i~--~~~l~~~~~V~Divy~-~T---~ll~~A~~~G~~ 216 (253)
T 3u62_A 181 EELPVS--DDSLKNLSLVYDVIYF-DT---PLVVKARKLGVK 216 (253)
T ss_dssp CCCSCC--HHHHTTCSEEEECSSS-CC---HHHHHHHHHTCS
T ss_pred CCCCCC--HHHhCcCCEEEEeeCC-Cc---HHHHHHHHCCCc
Confidence 00111 1235689999999877 32 233444556765
No 180
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.38 E-value=2.1e-06 Score=84.81 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=65.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~----~-g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
+|||+|||+|.||.+++..|+..|+ +|.++|+++++++........ . ...+++.+++. +.++ ++|+||++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~---~aD~Vi~a 77 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTA---NSDVIVVT 77 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGT---TCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHC---CCCEEEEc
Confidence 3699999999999999999999997 999999998877653322111 0 01134444565 3344 49999999
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+. .++++.+.+.+.. ++.+|+..||.
T Consensus 78 ~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP 121 (309)
T 1ur5_A 78 SGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNP 121 (309)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCc
Confidence 85442 1223445555554 67777777663
No 181
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.37 E-value=1.7e-06 Score=86.20 Aligned_cols=115 Identities=12% Similarity=0.157 Sum_probs=83.7
Q ss_pred CCCcEEEEcccHHHH-HHHHHHHHCCCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 6 QLTRIGLAGLAVMGQ-NLALNIAEKGFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~-~lA~~L~~~G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
+++||||||+|.||. .++..|...+++| .++|+++++.+++.++.. ....+++.+++++. .+.|+|++|+|+
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~-----~~~~~~~~~~ll~~-~~~D~V~i~tp~ 76 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFP-----SVPFAASAEQLITD-ASIDLIACAVIP 76 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHST-----TCCBCSCHHHHHTC-TTCCEEEECSCG
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcC-----CCcccCCHHHHhhC-CCCCEEEEeCCh
Confidence 357999999999996 6888887788886 589999999888877542 24568899999873 248999999998
Q ss_pred ChhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011394 84 GAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i 130 (487)
....+.++. .+..|+ ++++- .+..+.+.+++.+..++.|+.+.
T Consensus 77 ~~h~~~~~~----al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 77 CDRAELALR----TLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp GGHHHHHHH----HHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred hhHHHHHHH----HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 866554443 334566 55553 44556677777777777776544
No 182
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.36 E-value=7.6e-07 Score=92.71 Aligned_cols=97 Identities=10% Similarity=0.025 Sum_probs=74.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|||||+|.||..+|+.+...|.+|++||+++.+..+....+ +. ..+++++++. +|+|++++.+...+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G-------~~-~~~l~ell~~---aDiVi~~~~t~~lI 346 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEG-------YR-VVTMEYAADK---ADIFVTATGNYHVI 346 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTT-------CE-ECCHHHHTTT---CSEEEECSSSSCSB
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcC-------CE-eCCHHHHHhc---CCEEEECCCccccc
Confidence 4799999999999999999999999999999988753333222 23 3478888877 99999998544322
Q ss_pred HHHHHHHhhcccCCCEEEecCCCCch-hHHHH
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEWYE-NTERR 118 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~ 118 (487)
. .+.+..+++|.+|||++..... +...+
T Consensus 347 ~---~~~l~~MK~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 347 N---HDHMKAMRHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp C---HHHHHHCCTTEEEEECSSSSCSBCCGGG
T ss_pred C---HHHHhhCCCCcEEEEcCCCcchhchHHH
Confidence 1 3456778999999999998763 55444
No 183
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.36 E-value=7.4e-07 Score=90.95 Aligned_cols=91 Identities=10% Similarity=0.043 Sum_probs=71.9
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......+ +. ..+++|+++. +|+|+++..+...+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G-------~~-~~sL~eal~~---ADVVilt~gt~~iI 280 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEG-------YQ-VLLVEDVVEE---AHIFVTTTGNDDII 280 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE-ECCHHHHTTT---CSEEEECSSCSCSB
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhC-------Ce-ecCHHHHHhh---CCEEEECCCCcCcc
Confidence 4799999999999999999999999999999998766554433 22 4589999887 99999876554322
Q ss_pred HHHHHHHhhcccCCCEEEecCCCCc
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEWY 112 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~ 112 (487)
. .+....+++|.+||+++...+
T Consensus 281 ~---~e~l~~MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 281 T---SEHFPRMRDDAIVCNIGHFDT 302 (436)
T ss_dssp C---TTTGGGCCTTEEEEECSSSGG
T ss_pred C---HHHHhhcCCCcEEEEeCCCCC
Confidence 2 245677899999999998764
No 184
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.35 E-value=7.3e-07 Score=88.18 Aligned_cols=134 Identities=13% Similarity=0.107 Sum_probs=91.1
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
++||||||+|.||..++..|.+. ++++ .++|+++++.+++.+. +..+++++++++. .++|+|++++|+.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~--------~~~~~~~~~~l~~-~~~D~V~i~tp~~ 80 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG--------CVIESDWRSVVSA-PEVEAVIIATPPA 80 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT--------CEEESSTHHHHTC-TTCCEEEEESCGG
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh--------CcccCCHHHHhhC-CCCCEEEEeCChH
Confidence 46899999999999999999986 5664 5899999887654432 2457788998852 2389999999987
Q ss_pred hhHHHHHHHHhhcccCCC-EEEe-cCCCCchhHHHHHHHHHHcCCeEEecCCCCChhhhcCCCccccCCCHHHHHHHHHH
Q 011394 85 APVDETIKTLSAYMEKGD-CIID-GGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDI 162 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId-~st~~~~~~~~~~~~l~~~g~~~i~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~l 162 (487)
...+. +.. .+..|+ ++++ ..+..+.+.+++.+..++.|+.+..+.... -...+..++++
T Consensus 81 ~h~~~-~~~---al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r---------------~~p~~~~~~~~ 141 (315)
T 3c1a_A 81 THAEI-TLA---AIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQL---------------FNPAWEALKAD 141 (315)
T ss_dssp GHHHH-HHH---HHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGG---------------GCHHHHHHHHT
T ss_pred HHHHH-HHH---HHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechh---------------cCHHHHHHHHH
Confidence 54443 332 244565 5555 345566677777777777777665443211 11245667777
Q ss_pred HHHHhc
Q 011394 163 LLKVAA 168 (487)
Q Consensus 163 l~~ig~ 168 (487)
++.+|.
T Consensus 142 i~~lG~ 147 (315)
T 3c1a_A 142 LTSIGP 147 (315)
T ss_dssp HHHHCS
T ss_pred HHHcCC
Confidence 776764
No 185
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.34 E-value=3e-07 Score=79.91 Aligned_cols=105 Identities=13% Similarity=0.135 Sum_probs=79.2
Q ss_pred CcEEEEcc----cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
.+|+|||+ |.||..++++|.+.||+ +|++|+.+... .. . ++..+.|++|+.+. +|++++++|+
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~---~i--~---G~~~~~sl~el~~~---vDlavi~vp~ 80 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGE---EL--F---GEEAVASLLDLKEP---VDILDVFRPP 80 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTS---EE--T---TEECBSSGGGCCSC---CSEEEECSCH
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccC---cC--C---CEEecCCHHHCCCC---CCEEEEEeCH
Confidence 57999999 89999999999999997 77788774211 11 1 35677889888765 9999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
..+.++++++...- .+.+|+..++. .+++.+.++++|+++++
T Consensus 81 -~~~~~v~~~~~~~g-i~~i~~~~g~~----~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 81 -SALMDHLPEVLALR-PGLVWLQSGIR----HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp -HHHTTTHHHHHHHC-CSCEEECTTCC----CHHHHHHHHHTTCCEEE
T ss_pred -HHHHHHHHHHHHcC-CCEEEEcCCcC----HHHHHHHHHHcCCEEEc
Confidence 47777887776643 34677766554 35667777888999986
No 186
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.34 E-value=7.7e-07 Score=93.36 Aligned_cols=116 Identities=10% Similarity=0.146 Sum_probs=82.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH---HcCCCccchhhHHHHHHHHhhCCCCCCCc
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARI---WKGGCIIRAVFLDRIKKAYDRNADLANLL 400 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~i---w~~Gcii~s~ll~~~~~~~~~~~~~~~ll 400 (487)
.+.++++|++||++.+++++.++|++.++++. .+++..++.++ |+.| .+.|++++.....+.+.+......
T Consensus 176 ~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~-----~G~~~~~~~~~~~~w~~g-~~~S~l~~~~~~~l~~~d~~~~~~ 249 (482)
T 2pgd_A 176 DGAGHFVKMVHNGIEYGDMQLICEAYHLMKDV-----LGLGHKEMAKAFEEWNKT-ELDSFLIEITASILKFQDADGKHL 249 (482)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHTTT-TTCBHHHHHHHHHHHCBCTTSSBS
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcCHHHHHHHHHHhcCC-CcCchHHHHHhHHhhccCCCCCee
Confidence 47899999999999999999999999999864 13666655544 8888 468999888777665543222234
Q ss_pred CChhHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCC
Q 011394 401 VDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA--YFDSYRRER 447 (487)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~--~~~~~~~~~ 447 (487)
++...+...+++++ +|++..|.++|+|+|.+.+++. +...++.+|
T Consensus 250 ld~i~d~~~~k~t~--~~~~~~A~~~Gv~~P~i~~av~~~~~s~~k~~r 296 (482)
T 2pgd_A 250 LPKIRDSAGQKGTG--KWTAISALEYGVPVTLIGEAVFARCLSSLKDER 296 (482)
T ss_dssp GGGSCCCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHH
T ss_pred ecccccccccccHH--HHHHHHHHHcCCCcchHHHHHHHHhhhhhhhHH
Confidence 44333333345555 9999999999999999987664 334444433
No 187
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.34 E-value=3.2e-06 Score=85.19 Aligned_cols=112 Identities=11% Similarity=0.144 Sum_probs=79.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
++||||||+|.||...+..|.+. +++|. ++|+++++.+.+ +.. ++..+++++++++. .+.|+|++|+|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a-~~~------g~~~~~~~~~ll~~-~~~D~V~i~tp~~ 76 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAA-AQK------GLKIYESYEAVLAD-EKVDAVLIATPND 76 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHH-HTT------TCCBCSCHHHHHHC-TTCCEEEECSCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH-Hhc------CCceeCCHHHHhcC-CCCCEEEEcCCcH
Confidence 35899999999999999999887 66765 789999987643 221 35678899999873 2489999999987
Q ss_pred hhHHHHHHHHhhcccCCCE-EEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011394 85 APVDETIKTLSAYMEKGDC-IIDG-GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~i-iId~-st~~~~~~~~~~~~l~~~g~~~i 130 (487)
...+.+.. .+..|+. +++- -+..+.+.+++.+..++.|+.+.
T Consensus 77 ~h~~~~~~----al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (359)
T 3e18_A 77 SHKELAIS----ALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFM 120 (359)
T ss_dssp GHHHHHHH----HHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHH----HHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 65554433 2345664 4442 24455677777777777776543
No 188
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.32 E-value=3.4e-07 Score=88.23 Aligned_cols=110 Identities=19% Similarity=0.172 Sum_probs=77.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.+++.|||+|.||++++..|++.|.+|+++||++++.+++. +.. +... +.+++. .+|+||.++|.+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~------~~~~-~~~~l~----~~DiVInaTp~Gm~ 185 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG------CDCF-MEPPKS----AFDLIINATSASLH 185 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT------CEEE-SSCCSS----CCSEEEECCTTCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC------CeEe-cHHHhc----cCCEEEEcccCCCC
Confidence 35899999999999999999999999999999999999888 321 1211 233322 39999999987632
Q ss_pred HHHHH--HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 87 VDETI--KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 87 v~~vl--~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
.+..+ +.+...++++.+|+|+... | .|. +.+..+++|...++
T Consensus 186 ~~~~l~~~~l~~~l~~~~~v~D~vY~-P-~T~-ll~~A~~~G~~~~~ 229 (269)
T 3phh_A 186 NELPLNKEVLKGYFKEGKLAYDLAYG-F-LTP-FLSLAKELKTPFQD 229 (269)
T ss_dssp CSCSSCHHHHHHHHHHCSEEEESCCS-S-CCH-HHHHHHHTTCCEEC
T ss_pred CCCCCChHHHHhhCCCCCEEEEeCCC-C-chH-HHHHHHHCcCEEEC
Confidence 11111 1222345678999999876 5 443 66667788876543
No 189
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.32 E-value=5.4e-07 Score=94.36 Aligned_cols=114 Identities=17% Similarity=0.245 Sum_probs=84.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHH---HHHHcCCCccchhhHHHHHHHHhhCCCCCCCc
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGEL---ARIWKGGCIIRAVFLDRIKKAYDRNADLANLL 400 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i---~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll 400 (487)
.++++++|+++|+++++.|+.++|++.+++++. + ++..++ +..|++| .+.|++++...+.+++.+.-....
T Consensus 188 ~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~l---G--l~~~~~~~l~~~w~~g-~~~s~l~~~~~~~l~~~d~~~~~~ 261 (480)
T 2zyd_A 188 DGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGL---N--LTNEELAQTFTEWNNG-ELSSYLIDITKDIFTKKDEDGNYL 261 (480)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C--CCHHHHHHHHHHHHHT-TTCBHHHHHHHHHHHCBCTTSSBG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCHHHHHHHHHHhcCC-CcccHHHHHHHHHHhcCCCCCcch
Confidence 489999999999999999999999999998731 2 666555 4568888 578999998888875432212234
Q ss_pred CChhHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcC
Q 011394 401 VDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA--YFDSYRR 445 (487)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~--~~~~~~~ 445 (487)
++...+...+++++ +|++..|.++|+|+|.+.+++. +++.++.
T Consensus 262 v~~i~D~~~~k~tG--~~~~~~A~~~gv~~Pi~~~av~ar~~s~~k~ 306 (480)
T 2zyd_A 262 VDVILDEAANKGTG--KWTSQSALDLGEPLSLITESVFARYISSLKD 306 (480)
T ss_dssp GGGBCCCCCCCSCT--THHHHHHHHHTCCCHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHhcCchHH--HHHHHHHHHcCCCCchHHHHHHHHhhhcchh
Confidence 44434334456777 9999999999999999999975 4444443
No 190
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.31 E-value=3.9e-06 Score=84.04 Aligned_cols=116 Identities=13% Similarity=0.193 Sum_probs=81.0
Q ss_pred CCCCcEEEEcccHHHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 5 KQLTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
++|+||||||+|.||.. ++..+.+. +.+|. ++|++++++++++++... ...++|.++++++ ++.|+|++|+
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~-----~~~y~d~~ell~~-~~iDaV~I~t 94 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSV-----PHAFGSYEEMLAS-DVIDAVYIPL 94 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTC-----SEEESSHHHHHHC-SSCSEEEECS
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCC-----CeeeCCHHHHhcC-CCCCEEEEeC
Confidence 46789999999999986 46666665 56765 789999999998876531 2468899999875 4589999999
Q ss_pred CCChhHHHHHHHHhhcccCCCEEEec--CCCCchhHHHHHHHHHHcCCeEE
Q 011394 82 KAGAPVDETIKTLSAYMEKGDCIIDG--GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~--st~~~~~~~~~~~~l~~~g~~~i 130 (487)
|+....+-++..+ ..|+-|+.- -+....+.+++.+..++.|+.+.
T Consensus 95 P~~~H~~~~~~al----~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~ 141 (350)
T 4had_A 95 PTSQHIEWSIKAA----DAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVT 141 (350)
T ss_dssp CGGGHHHHHHHHH----HTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEE
T ss_pred CCchhHHHHHHHH----hcCCEEEEeCCcccchhhHHHHHHHHHHcCCcee
Confidence 9986655544433 345544431 12334577777777777665443
No 191
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.29 E-value=6.7e-07 Score=90.08 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=68.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCC-----c-------------cccCCHHHHHh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLP-----L-------------FGFRDPESFVN 69 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~-----~-------------~~~~s~~e~~~ 69 (487)
.||+|||+|.||..+++.+...|.+|++||+++++.+.+.+.+...-... . ....++++.++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~ 264 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAIT 264 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHT
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHh
Confidence 58999999999999999999999999999999999888776432100000 0 00113444444
Q ss_pred hcCCCcEEEEec--CCChhHHHH-HHHHhhcccCCCEEEecCC
Q 011394 70 SIQKPRVIIMLV--KAGAPVDET-IKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 70 ~l~~advIi~~v--p~~~~v~~v-l~~l~~~l~~g~iiId~st 109 (487)
++|+||.++ |.... ..+ -++....+++|.+|||++.
T Consensus 265 ---~aDIVI~tv~iPg~~a-p~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 265 ---KFDIVITTALVPGRPA-PRLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp ---TCSEEEECCCCTTSCC-CCCBCHHHHHTSCTTCEEEETTG
T ss_pred ---cCCEEEECCCCCCccc-ceeecHHHHhcCCCCcEEEEEeC
Confidence 499999986 32111 111 2566777889999999974
No 192
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.29 E-value=4.7e-06 Score=83.98 Aligned_cols=120 Identities=17% Similarity=0.114 Sum_probs=82.9
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
+++||||||+|.||..++..|.+. ++++ .++|+++++.+.+.++.... .....++++++++++ .++|+|++++|+
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~--~~~~~~~~~~~ll~~-~~~D~V~i~tp~ 81 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYP--ESTKIHGSYESLLED-PEIDALYVPLPT 81 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCC--TTCEEESSHHHHHHC-TTCCEEEECCCG
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC--CCCeeeCCHHHHhcC-CCCCEEEEcCCh
Confidence 346899999999999999999885 5665 58899999988887654210 013567899998863 238999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEEec--CCCCchhHHHHHHHHHHcCCeEEec
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDG--GNEWYENTERREKAMAELGLLYLGM 132 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~--st~~~~~~~~~~~~l~~~g~~~i~~ 132 (487)
....+.+. ..+..|+.|+.- .+....+.+++.+..++.|+.+..+
T Consensus 82 ~~h~~~~~----~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~ 128 (362)
T 1ydw_A 82 SLHVEWAI----KAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDG 128 (362)
T ss_dssp GGHHHHHH----HHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEEC
T ss_pred HHHHHHHH----HHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 75443332 234567654432 2445566777777777778766543
No 193
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.27 E-value=2.2e-06 Score=86.43 Aligned_cols=113 Identities=13% Similarity=0.139 Sum_probs=79.2
Q ss_pred CCcEEEEcccHHHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++||||||+|.||.. ++..|.+. +++|. ++|+++++++++.+... ....+++++++++. .+.|+|++|+|+
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp~ 78 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFIS-----DIPVLDNVPAMLNQ-VPLDAVVMAGPP 78 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSC-----SCCEESSHHHHHHH-SCCSEEEECSCH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcC-----CCcccCCHHHHhcC-CCCCEEEEcCCc
Confidence 468999999999985 88998876 67766 88999999887765431 24578899999885 236999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEE-ec-CCCCchhHHHHHHHHHHcCCeE
Q 011394 84 GAPVDETIKTLSAYMEKGDCII-DG-GNEWYENTERREKAMAELGLLY 129 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiI-d~-st~~~~~~~~~~~~l~~~g~~~ 129 (487)
....+.+.. .+..|+.|+ +- -+....+.+++.+..++.|+.+
T Consensus 79 ~~H~~~~~~----al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~ 122 (359)
T 3m2t_A 79 QLHFEMGLL----AMSKGVNVFVEKPPCATLEELETLIDAARRSDVVS 122 (359)
T ss_dssp HHHHHHHHH----HHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHH----HHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEE
Confidence 755444332 344565444 32 2344556777777666666544
No 194
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.26 E-value=1.1e-06 Score=89.28 Aligned_cols=97 Identities=11% Similarity=0.105 Sum_probs=69.4
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc------------c------------cCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF------------G------------FRD 63 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~------------~------------~~s 63 (487)
.||+|||+|.||..+++.+...|.+|++||+++++.+.+.+.+... ..+. . ..+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~--~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~ 268 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKF--IAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL 268 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEE--CCCCC-----------------CHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCce--eecccccccccccccchhhhcchhhhhhhHhH
Confidence 5899999999999999999999999999999999888776644210 0000 0 124
Q ss_pred HHHHHhhcCCCcEEEEec--CCChhHHHHHHHHhhcccCCCEEEecCC
Q 011394 64 PESFVNSIQKPRVIIMLV--KAGAPVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 64 ~~e~~~~l~~advIi~~v--p~~~~v~~vl~~l~~~l~~g~iiId~st 109 (487)
++++++. +|+||.++ |...+-.-+-++....+++|.+|||++.
T Consensus 269 l~e~l~~---aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 269 VAEHIAK---QDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHT---CSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred HHHHhcC---CCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 5556665 99999986 3211111112567778899999999984
No 195
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.26 E-value=1.5e-06 Score=87.51 Aligned_cols=109 Identities=15% Similarity=0.233 Sum_probs=75.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|+|+|+|+||..+|+.|.+.|++|+++|+++++++++.+... .... +.+++.. ..||+++.|.... .+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g------a~~v-~~~~ll~--~~~DIvip~a~~~-~I 243 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG------ADAV-APNAIYG--VTCDIFAPCALGA-VL 243 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC------CEEC-CGGGTTT--CCCSEEEECSCSC-CB
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC------CEEE-ChHHHhc--cCCcEeeccchHH-Hh
Confidence 57999999999999999999999999999999999888776531 2222 3444433 1399999886543 22
Q ss_pred HHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
.. ..++.+ ..++|++.++. |.+.++..+.+.++|+.|+.
T Consensus 244 ~~---~~~~~l-g~~iV~e~An~-p~t~~ea~~~L~~~Gi~~~P 282 (364)
T 1leh_A 244 ND---FTIPQL-KAKVIAGSADN-QLKDPRHGKYLHELGIVYAP 282 (364)
T ss_dssp ST---THHHHC-CCSEECCSCSC-CBSSHHHHHHHHHHTCEECC
T ss_pred CH---HHHHhC-CCcEEEeCCCC-CcccHHHHHHHHhCCCEEec
Confidence 21 122334 44666666665 44444566778888886653
No 196
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.24 E-value=9e-07 Score=77.29 Aligned_cols=104 Identities=15% Similarity=0.126 Sum_probs=76.7
Q ss_pred CcEEEEcc----cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
.+|+|||+ |.+|..++.+|.+.||+ +|++|+.. +++ . ++..+.+++|+... +|++++++|+
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~i------~---G~~~y~sl~~l~~~---vDlvvi~vp~ 87 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EEV------L---GRKCYPSVLDIPDK---IEVVDLFVKP 87 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SEE------T---TEECBSSGGGCSSC---CSEEEECSCH
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-CeE------C---CeeccCCHHHcCCC---CCEEEEEeCH
Confidence 57999999 79999999999999997 56666653 111 1 35677889988765 9999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM 132 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 132 (487)
. .+.++++++...- .+.+|+..++. .+++.+.+++.|+++++.
T Consensus 88 ~-~~~~vv~~~~~~g-i~~i~~~~g~~----~~~l~~~a~~~Gi~vvGp 130 (144)
T 2d59_A 88 K-LTMEYVEQAIKKG-AKVVWFQYNTY----NREASKKADEAGLIIVAN 130 (144)
T ss_dssp H-HHHHHHHHHHHHT-CSEEEECTTCC----CHHHHHHHHHTTCEEEES
T ss_pred H-HHHHHHHHHHHcC-CCEEEECCCch----HHHHHHHHHHcCCEEEcC
Confidence 4 7788887776643 34556554432 456777788889998863
No 197
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.23 E-value=2.8e-06 Score=84.54 Aligned_cols=116 Identities=12% Similarity=0.124 Sum_probs=79.6
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCC-CcEE-EEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcEEEEecC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKG-FPIS-VYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G-~~V~-v~dr~~~~~~~l~~~~~~~g~~~~-~~~~s~~e~~~~l~~advIi~~vp 82 (487)
+++||||||+|.||..++..|.+.+ ++|. ++|+++++.+++.+.. ++ ..+++++++++. .++|+|++++|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~------~~~~~~~~~~~ll~~-~~~D~V~i~tp 76 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKY------HLPKAYDKLEDMLAD-ESIDVIYVATI 76 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CC------CCSCEESCHHHHHTC-TTCCEEEECSC
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHc------CCCcccCCHHHHhcC-CCCCEEEECCC
Confidence 3468999999999999999998764 4554 7899999887776643 23 367899999873 23899999999
Q ss_pred CChhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEec
Q 011394 83 AGAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLGM 132 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~ 132 (487)
+....+.+.. .+..|+ ++++- -+..+.+.+++.+..++.|+.+..+
T Consensus 77 ~~~h~~~~~~----al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~ 124 (329)
T 3evn_A 77 NQDHYKVAKA----ALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEA 124 (329)
T ss_dssp GGGHHHHHHH----HHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred cHHHHHHHHH----HHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 8765444333 234565 44442 2445567777777777777765543
No 198
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.23 E-value=6.7e-06 Score=82.97 Aligned_cols=113 Identities=15% Similarity=0.159 Sum_probs=78.1
Q ss_pred CCCCcEEEEcccHHHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 5 KQLTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
.+++||||||+|.||.. .+..+.+. +++|. ++|++++++++ ... ....+++++++++. .+.|+|++|+
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~---~~~-----~~~~~~~~~~ll~~-~~~D~V~i~t 75 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR---DLP-----DVTVIASPEAAVQH-PDVDLVVIAS 75 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH---HCT-----TSEEESCHHHHHTC-TTCSEEEECS
T ss_pred CCcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh---hCC-----CCcEECCHHHHhcC-CCCCEEEEeC
Confidence 34569999999999997 66667665 67775 88999987642 211 25678899999873 3489999999
Q ss_pred CCChhHHHHHHHHhhcccCCCEEEecC--CCCchhHHHHHHHHHHcCCeEE
Q 011394 82 KAGAPVDETIKTLSAYMEKGDCIIDGG--NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~i 130 (487)
|+....+.+.. .+..|+.|+.-- +....+.+++.+..++.|+.+.
T Consensus 76 p~~~H~~~~~~----al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (364)
T 3e82_A 76 PNATHAPLARL----ALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLS 122 (364)
T ss_dssp CGGGHHHHHHH----HHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred ChHHHHHHHHH----HHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 98766554433 345666666543 4455667777777777776554
No 199
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.22 E-value=4.5e-06 Score=86.29 Aligned_cols=120 Identities=8% Similarity=0.086 Sum_probs=81.5
Q ss_pred CCcEEEEcccHHHH-HHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQ-NLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~-~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++||||||+|.||. .++..|.+. +++| .++|+++++.+++.++.... ..++..+++.+++++. .++|+|++|+|+
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~-~~~~~~~~~~~~ll~~-~~vD~V~iatp~ 160 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVD-PRKIYDYSNFDKIAKD-PKIDAVYIILPN 160 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCC-GGGEECSSSGGGGGGC-TTCCEEEECSCG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC-cccccccCCHHHHhcC-CCCCEEEEcCCc
Confidence 46899999999997 899998875 5665 58999999988877653210 0002257789998763 238999999998
Q ss_pred ChhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEec
Q 011394 84 GAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLGM 132 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~ 132 (487)
....+.+.. .+..|+ ++++. .+....+.+++.+..++.|+.+..+
T Consensus 161 ~~h~~~~~~----al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 207 (433)
T 1h6d_A 161 SLHAEFAIR----AFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIG 207 (433)
T ss_dssp GGHHHHHHH----HHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred hhHHHHHHH----HHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 765444433 234566 55543 3445566777777777777765543
No 200
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.20 E-value=7.9e-06 Score=80.85 Aligned_cols=103 Identities=11% Similarity=0.113 Sum_probs=65.4
Q ss_pred CCCCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcC-CC--CccccCCHHHHHhhcCCCcEEE
Q 011394 4 GKQLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEG-DL--PLFGFRDPESFVNSIQKPRVII 78 (487)
Q Consensus 4 ~~~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~g-~~--~~~~~~s~~e~~~~l~~advIi 78 (487)
.+.++||+|||+|.||.++|..|+..|. +|.++|+++++.+.......... .. +.+...+..+.+ +++|+||
T Consensus 3 ~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al---~~aDvVi 79 (316)
T 1ldn_A 3 NNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDC---RDADLVV 79 (316)
T ss_dssp TTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGT---TTCSEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHh---CCCCEEE
Confidence 3456799999999999999999998875 89999999886654322211100 00 122222333333 4499999
Q ss_pred EecCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 79 MLVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 79 ~~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++++.+. .+.++.+.+.++. ++.+++..||.
T Consensus 80 ia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNP 125 (316)
T 1ldn_A 80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNP 125 (316)
T ss_dssp ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSS
T ss_pred EcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCc
Confidence 9976552 2233445555554 66677777763
No 201
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.19 E-value=7.5e-06 Score=80.04 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=65.9
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHH----HHhhhhc-CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDET----VERAKKE-GDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l----~~~~~~~-g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
|||+|||+|.||.++|..|+.+|+ +|.+||+++++++.. .+..... ...++..+++ .+.+++ +|+||++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~---aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG---SEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT---CSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC---CCEEEEC
Confidence 699999999999999999999998 999999999887522 1111100 0012344455 555554 9999999
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
...+. .++++.+.+..+ .++.+++..||.
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNP 120 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNP 120 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCc
Confidence 75441 122333455555 577888888864
No 202
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.19 E-value=1.2e-05 Score=81.73 Aligned_cols=114 Identities=12% Similarity=0.116 Sum_probs=82.7
Q ss_pred CCcEEEEccc-HHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLA-VMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG-~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++||||||+| .||..++..|.+. +++|. ++|+++++.+++.++. ++..++|++++++. .+.|+|++++|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~~ell~~-~~vD~V~i~tp~ 74 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY------GIPVFATLAEMMQH-VQMDAVYIASPH 74 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH------TCCEESSHHHHHHH-SCCSEEEECSCG
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc------CCCeECCHHHHHcC-CCCCEEEEcCCc
Confidence 4689999999 9999999999876 45655 7899999998887654 25678899999875 348999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEE-ec-CCCCchhHHHHHHHHHHcCCeEEe
Q 011394 84 GAPVDETIKTLSAYMEKGDCII-DG-GNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiI-d~-st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
....+.+.. .+..|+.|+ +- -+......+++.+..+++|+.+..
T Consensus 75 ~~H~~~~~~----al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 120 (387)
T 3moi_A 75 QFHCEHVVQ----ASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVV 120 (387)
T ss_dssp GGHHHHHHH----HHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHH----HHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEE
Confidence 765544433 234565444 32 234456677777777777765543
No 203
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.19 E-value=1.3e-05 Score=80.18 Aligned_cols=116 Identities=16% Similarity=0.087 Sum_probs=81.4
Q ss_pred CCCCcEEEEccc-HHHHHHHHHHHHC--CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 5 KQLTRIGLAGLA-VMGQNLALNIAEK--GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 5 ~~~~kIgiIGlG-~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
.++.||||||+| .||...+..|.+. +++| .++|+++++.+++.++... ...+++.+++++. .+.|+|++|
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~-----~~~~~~~~~ll~~-~~vD~V~i~ 89 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN-----PAVFDSYEELLES-GLVDAVDLT 89 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS-----CEEESCHHHHHHS-SCCSEEEEC
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCC-----CcccCCHHHHhcC-CCCCEEEEe
Confidence 445699999999 8999999999876 4565 5889999999888776421 2568899999874 348999999
Q ss_pred cCCChhHHHHHHHHhhcccCCCE-EEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011394 81 VKAGAPVDETIKTLSAYMEKGDC-IIDG-GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~i-iId~-st~~~~~~~~~~~~l~~~g~~~i 130 (487)
+|+....+.+.. .+..|+- +++- -+....+.+++.+..++.|+.+.
T Consensus 90 tp~~~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 137 (340)
T 1zh8_A 90 LPVELNLPFIEK----ALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVY 137 (340)
T ss_dssp CCGGGHHHHHHH----HHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEE
T ss_pred CCchHHHHHHHH----HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 998755444333 2345654 4442 12344566667776666666543
No 204
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.18 E-value=1.6e-06 Score=84.32 Aligned_cols=112 Identities=18% Similarity=0.071 Sum_probs=78.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.+++.|+|+|.||.+++..|++.|. +|+++||++++.+++.+.....+ ++. ..+.+++.. .+|+||.++|.+.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~~~-~~~~~~l~~---~aDiIInaTp~gm 199 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--EVK-AQAFEQLKQ---SYDVIINSTSASL 199 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--CEE-EEEGGGCCS---CEEEEEECSCCCC
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--Cee-EeeHHHhcC---CCCEEEEcCcCCC
Confidence 3579999999999999999999996 99999999999998887653211 122 224444433 3999999999874
Q ss_pred hHHHH-HHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011394 86 PVDET-IKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (487)
Q Consensus 86 ~v~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (487)
..+.. +. ...+.++.+|+|+... |..|. +.+..+++|..
T Consensus 200 ~~~~~~l~--~~~l~~~~~V~DlvY~-P~~T~-ll~~A~~~G~~ 239 (281)
T 3o8q_A 200 DGELPAID--PVIFSSRSVCYDMMYG-KGYTV-FNQWARQHGCA 239 (281)
T ss_dssp ----CSCC--GGGEEEEEEEEESCCC-SSCCH-HHHHHHHTTCS
T ss_pred CCCCCCCC--HHHhCcCCEEEEecCC-CccCH-HHHHHHHCCCC
Confidence 32211 11 1346788999999875 44453 44566777875
No 205
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.18 E-value=1.9e-06 Score=87.12 Aligned_cols=121 Identities=12% Similarity=0.211 Sum_probs=80.0
Q ss_pred CCCCCCCCcEEEEcccHHHHHHHHHHHHC--CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011394 1 MVEGKQLTRIGLAGLAVMGQNLALNIAEK--GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (487)
Q Consensus 1 ~~~~~~~~kIgiIGlG~mG~~lA~~L~~~--G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advI 77 (487)
|-+.+...||||||+| +|...+..+.+. ++++. ++|+++++.++++++. ++..++|.+++.++ .|++
T Consensus 1 M~~~~~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~------gv~~~~~~~~l~~~---~D~v 70 (372)
T 4gmf_A 1 MPSASPKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF------GIPLYTSPEQITGM---PDIA 70 (372)
T ss_dssp ------CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT------TCCEESSGGGCCSC---CSEE
T ss_pred CCCCCCCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh------CCCEECCHHHHhcC---CCEE
Confidence 4455566799999999 899888888765 56666 7899999999988764 36678899998775 9999
Q ss_pred EEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 78 IMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 78 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
++++|+......-.+-....+..|+-|+.-=-..+.+.+++.+..+++|+.|.-
T Consensus 71 ~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v 124 (372)
T 4gmf_A 71 CIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWI 124 (372)
T ss_dssp EECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEE
Confidence 999998644211111122334566655554444566777777777777776653
No 206
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.16 E-value=3e-06 Score=84.87 Aligned_cols=113 Identities=9% Similarity=0.158 Sum_probs=77.1
Q ss_pred CCcEEEEcccHHHHHHHHH-H-HH-CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAGLAVMGQNLALN-I-AE-KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~-L-~~-~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
|+||||||+|.||..+... + .. .+++|. ++|+++++.+.+.+.. ++..+++++++++. .+.|+|++|+|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~------~~~~~~~~~~ll~~-~~~D~V~i~tp 74 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYS------HIHFTSDLDEVLND-PDVKLVVVCTH 74 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGT------TCEEESCTHHHHTC-TTEEEEEECSC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcC------CCceECCHHHHhcC-CCCCEEEEcCC
Confidence 4699999999999975444 4 32 367776 8899988763322211 35678899999874 34799999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecC--CCCchhHHHHHHHHHHcCCeEE
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGG--NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~i 130 (487)
+....+.+. ..+..|+.|+.-- +..+.+.+++.+..++.|+.+.
T Consensus 75 ~~~h~~~~~----~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 120 (345)
T 3f4l_A 75 ADSHFEYAK----RALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVT 120 (345)
T ss_dssp GGGHHHHHH----HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHH----HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 886655443 3345677666543 4455677777777777776554
No 207
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.15 E-value=8.7e-06 Score=80.60 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=62.0
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCCC--CccccCCHHHHHhhcCCCcEEEEec
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGDL--PLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~g~~--~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
+++||+|||+|.+|.+++..|+..|+ +|.++|+++++++...........+ +++...+..+. ++++|+||+++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a---~~~aDvVii~~ 82 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSD---VKDCDVIVVTA 82 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGG---GTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHH---hCCCCEEEEcC
Confidence 45799999999999999999999998 9999999988765433222110000 12222222333 44599999999
Q ss_pred CCChh---------------HHHHHHHHhhcccCCCEEEecCCC
Q 011394 82 KAGAP---------------VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 82 p~~~~---------------v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+.. ++++.+.+.++ .++.+|+..||.
T Consensus 83 g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP 125 (318)
T 1y6j_A 83 GANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNP 125 (318)
T ss_dssp CC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSS
T ss_pred CCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCc
Confidence 76531 34455666665 477777777553
No 208
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.14 E-value=3.4e-06 Score=88.30 Aligned_cols=115 Identities=17% Similarity=0.231 Sum_probs=82.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHH---HHc-CCCccchhhHHHHHHHHhhCCCCCCC
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELAR---IWK-GGCIIRAVFLDRIKKAYDRNADLANL 399 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~---iw~-~Gcii~s~ll~~~~~~~~~~~~~~~l 399 (487)
.+.++++|+++|++.+..++.++|.+.++++. + ++..++.+ .|+ .| ...|++++.....+.+.+.-...
T Consensus 178 ~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~----G--~~~~~~~~l~~~w~~~g-~~~s~l~~~~~~~l~~~d~~G~~ 250 (478)
T 1pgj_A 178 GGAGSCVKMYHNSGEYAILQIWGEVFDILRAM----G--LNNDEVAAVLEDWKSKN-FLKSYMLDISIAAARAKDKDGSY 250 (478)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----T--CCHHHHHHHHHHHHHTS-TTCBHHHHHHHHHHHCBCTTSSB
T ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHHHc----C--CCHHHHHHHHHHhccCC-CcCchHHHhhchhhhcCCCCChh
Confidence 47889999999999999999999999998853 3 66655544 577 77 67899988887777542211113
Q ss_pred cCChhHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCC
Q 011394 400 LVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA--YFDSYRRER 447 (487)
Q Consensus 400 l~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~--~~~~~~~~~ 447 (487)
.+|...+...+++++ +|++..|.++|+|+|.+.+++. +++..+.+|
T Consensus 251 ~ld~i~D~~~~kgtg--~~~~~~A~~~Gv~~Pi~~~av~~r~ls~~~~~r 298 (478)
T 1pgj_A 251 LTEHVMDRIGSKGTG--LWSAQEALEIGVPAPSLNMAVVSRQFTMYKTER 298 (478)
T ss_dssp GGGGBCCCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHhcCccHH--HHHHHHHHHhCCCChHHHHHHHHHHHhCCCCHH
Confidence 333333223345555 9999999999999999999885 444444433
No 209
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.14 E-value=5.1e-06 Score=81.65 Aligned_cols=96 Identities=14% Similarity=0.180 Sum_probs=64.1
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHH---HHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSK---VDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~---~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
.++||+|||+|.||..+|..|+.+|+ +|.++|++++. ..++..... .+++.+.++++ ++ +||+||++
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~----~~i~~t~d~~~-l~---~aD~Vi~a 84 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNL----PNVEISKDLSA-SA---HSKVVIFT 84 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTC----TTEEEESCGGG-GT---TCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcC----CCeEEeCCHHH-HC---CCCEEEEc
Confidence 46799999999999999999999999 99999999852 222332111 13555566633 34 49999999
Q ss_pred cCCCh--------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 81 VKAGA--------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 81 vp~~~--------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+..+. .+++++.++.++. ++.++|..||.
T Consensus 85 ag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP 127 (303)
T 2i6t_A 85 VNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQP 127 (303)
T ss_dssp CCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCCh
Confidence 73221 1344556666655 77888888884
No 210
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.13 E-value=6.2e-06 Score=86.07 Aligned_cols=91 Identities=10% Similarity=0.061 Sum_probs=72.8
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|+|||+|.||..+|+.+...|.+|+++|+++.+.+...+.+ +. ..+++++++. +|+||++++....+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G-------a~-~~~l~e~l~~---aDvVi~atgt~~~i 343 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG-------FD-VVTVEEAIGD---ADIVVTATGNKDII 343 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE-ECCHHHHGGG---CSEEEECSSSSCSB
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------CE-EecHHHHHhC---CCEEEECCCCHHHH
Confidence 4799999999999999999999999999999999877665543 23 3467787776 99999999876433
Q ss_pred HHHHHHHhhcccCCCEEEecCCCCc
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEWY 112 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~ 112 (487)
. .+.+..+++|.+|++.+....
T Consensus 344 ~---~~~l~~mk~ggilvnvG~~~~ 365 (494)
T 3ce6_A 344 M---LEHIKAMKDHAILGNIGHFDN 365 (494)
T ss_dssp C---HHHHHHSCTTCEEEECSSSGG
T ss_pred H---HHHHHhcCCCcEEEEeCCCCC
Confidence 2 245566889999999998653
No 211
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.13 E-value=1.6e-05 Score=78.80 Aligned_cols=100 Identities=17% Similarity=0.236 Sum_probs=66.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHH----HHhhhhcC-CCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDET----VERAKKEG-DLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l----~~~~~~~g-~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
++||+|||+|.||.++|..|+..|+ +|.+||+++++++.. .+.....+ ..++..+++. +.++ ++|+||++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~---~aDiVIia 82 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIE---GADVVIVT 82 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGT---TCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHC---CCCEEEEc
Confidence 5699999999999999999999999 999999999876532 22110000 1134444555 4444 49999999
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
...+. .++++.+.+..+. ++.+++..||..
T Consensus 83 ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPv 127 (324)
T 3gvi_A 83 AGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPL 127 (324)
T ss_dssp CSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred cCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCc
Confidence 75331 1233334555553 777888888743
No 212
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.12 E-value=4.7e-06 Score=82.01 Aligned_cols=107 Identities=17% Similarity=0.203 Sum_probs=64.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
++||||||+|.||..++..|.+. +++|. ++|+++++++. .+. .....+++.+. .++|+|++|+|+.
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~-----~~~~~~~l~~~----~~~DvViiatp~~ 76 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQ-----PFRVVSDIEQL----ESVDVALVCSPSR 76 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCT-----TSCEESSGGGS----SSCCEEEECSCHH
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCC-----CcCCHHHHHhC----CCCCEEEECCCch
Confidence 45899999999999999999874 67777 79999887654 111 11123344333 3499999999976
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC---CchhHHHHHHHHHHcCCeE
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE---WYENTERREKAMAELGLLY 129 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~---~~~~~~~~~~~l~~~g~~~ 129 (487)
...+.+ ...+..|..|++.... .+....++.+..++.|..+
T Consensus 77 ~h~~~~----~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~ 120 (304)
T 3bio_A 77 EVERTA----LEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAA 120 (304)
T ss_dssp HHHHHH----HHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEE
T ss_pred hhHHHH----HHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEE
Confidence 543332 2345678888887542 2233445555556666543
No 213
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.11 E-value=1.4e-05 Score=83.62 Aligned_cols=115 Identities=22% Similarity=0.265 Sum_probs=82.9
Q ss_pred CcEEEEcc----cHHHHHHHHHHHHC--CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 8 TRIGLAGL----AVMGQNLALNIAEK--GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 8 ~kIgiIGl----G~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
+||||||+ |.||...+..|.+. +++| .++|+++++.+.+.++.... ....+++++++++. .+.|+|++|
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~---~~~~~~d~~ell~~-~~vD~V~I~ 115 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLK---HATGFDSLESFAQY-KDIDMIVVS 115 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCT---TCEEESCHHHHHHC-TTCSEEEEC
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCC---cceeeCCHHHHhcC-CCCCEEEEc
Confidence 58999999 99999999999986 6775 48899999998887754210 12468899999863 248999999
Q ss_pred cCCChhHHHHHHHHhhcccCC-------CEEEec-CCCCchhHHHHHHHHHHcC-CeEE
Q 011394 81 VKAGAPVDETIKTLSAYMEKG-------DCIIDG-GNEWYENTERREKAMAELG-LLYL 130 (487)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g-------~iiId~-st~~~~~~~~~~~~l~~~g-~~~i 130 (487)
+|+....+.++..+ ..| .++++- -+..+.+.+++.+.+++.| +.+.
T Consensus 116 tp~~~H~~~~~~al----~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~ 170 (479)
T 2nvw_A 116 VKVPEHYEVVKNIL----EHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTI 170 (479)
T ss_dssp SCHHHHHHHHHHHH----HHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEE
T ss_pred CCcHHHHHHHHHHH----HCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 99876555444333 344 467764 3445667777777777777 6543
No 214
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.11 E-value=1.5e-05 Score=78.82 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=65.0
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHh---hhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVER---AKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~---~~~~g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
+++||+|||+|.+|.+++..|+..|. +|.++|+++++++..... .....+.+++...+..+..+ ++|+||++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~---~aDvVvi~ 81 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCH---DADLVVIC 81 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGT---TCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhC---CCCEEEEC
Confidence 34699999999999999999998884 899999998876543221 11000012222223344444 49999999
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+. .++++.+.+.++ .++.+||..||.
T Consensus 82 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP 125 (317)
T 3d0o_A 82 AGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNP 125 (317)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCc
Confidence 86542 123333555555 577777777653
No 215
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.10 E-value=3.4e-06 Score=85.87 Aligned_cols=90 Identities=8% Similarity=0.089 Sum_probs=69.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|+|+|+|.+|..+|+.|...|.+|+++|+++.+..+....+ +. ..++++++.. +|+|++|..+.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G-------~~-v~~Leeal~~---ADIVi~atgt~--- 286 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDG-------FR-LVKLNEVIRQ---VDIVITCTGNK--- 286 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE-ECCHHHHTTT---CSEEEECSSCS---
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcC-------CE-eccHHHHHhc---CCEEEECCCCc---
Confidence 3799999999999999999999999999999997665444332 22 4578888876 99999973322
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCc
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWY 112 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~ 112 (487)
.++ .+....+++|.+||+++...+
T Consensus 287 -~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 287 -NVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp -CSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred -ccCCHHHHHhcCCCcEEEEecCCCc
Confidence 233 245567889999999998754
No 216
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.10 E-value=1.9e-05 Score=79.23 Aligned_cols=111 Identities=17% Similarity=0.243 Sum_probs=77.8
Q ss_pred CCcEEEEcccHHHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++||||||+|.||.. .+..|.+. +++|. ++|+++++.+ +... ....+++++++++. .+.|+|++|+|+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~---~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp~ 77 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH---ADWP-----AIPVVSDPQMLFND-PSIDLIVIPTPN 77 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---TTCS-----SCCEESCHHHHHHC-SSCCEEEECSCT
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH---hhCC-----CCceECCHHHHhcC-CCCCEEEEeCCh
Confidence 358999999999997 77777765 66765 8899998765 1111 35678899999874 458999999998
Q ss_pred ChhHHHHHHHHhhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011394 84 GAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i 130 (487)
....+.+... +..|+ ++++-- +....+.+++.+..++.|+.+.
T Consensus 78 ~~H~~~~~~a----l~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (352)
T 3kux_A 78 DTHFPLAQSA----LAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLS 122 (352)
T ss_dssp TTHHHHHHHH----HHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHH----HHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 8665544433 34565 555433 4455667777777777776544
No 217
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.10 E-value=1.8e-05 Score=79.82 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=78.4
Q ss_pred CcEEEEcccHHHH-HHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 8 TRIGLAGLAVMGQ-NLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIGlG~mG~-~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
+||||||+|.+|. .++..+...+.+|. ++|+++++++++.++.. ....+++++++++. .+.|+|++++|+..
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~-----~~~~~~~~~~ll~~-~~vD~V~I~tp~~~ 100 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYA-----DARRIATAEEILED-ENIGLIVSAAVSSE 100 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSS-----SCCEESCHHHHHTC-TTCCEEEECCCHHH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcC-----CCcccCCHHHHhcC-CCCCEEEEeCChHH
Confidence 5899999999995 57777777888855 88999999998887642 14578899999874 34899999999875
Q ss_pred hHHHHHHHHhhcccCCCE-EEec-CCCCchhHHHHHHHHHHcCCeE
Q 011394 86 PVDETIKTLSAYMEKGDC-IIDG-GNEWYENTERREKAMAELGLLY 129 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~i-iId~-st~~~~~~~~~~~~l~~~g~~~ 129 (487)
..+.+.. .+..|+- +++- -+....+.+++.+..++.|+.+
T Consensus 101 H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 142 (361)
T 3u3x_A 101 RAELAIR----AMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIF 142 (361)
T ss_dssp HHHHHHH----HHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHH----HHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 5444333 3345654 4442 1334456666766666666543
No 218
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.10 E-value=2.6e-06 Score=82.48 Aligned_cols=117 Identities=21% Similarity=0.141 Sum_probs=76.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++|.|+|+|.||.+++..|++.|.+|+++||++++.+++.+.....+ .+. ..+++++.+ ..+|+||.++|.+..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~--~~~-~~~~~~~~~--~~~DivIn~t~~~~~ 193 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQ-AVSMDSIPL--QTYDLVINATSAGLS 193 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEE-EEEGGGCCC--SCCSEEEECCCC---
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC--CeE-EeeHHHhcc--CCCCEEEECCCCCCC
Confidence 358999999999999999999999999999999999988876542110 111 123333322 149999999997643
Q ss_pred HHHHHHHH-hhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe-EEe
Q 011394 87 VDETIKTL-SAYMEKGDCIIDGGNEWYENTERREKAMAELGLL-YLG 131 (487)
Q Consensus 87 v~~vl~~l-~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~-~i~ 131 (487)
. .+. .+ ...+.++.+++|++.....++. ..+..+++|.. +++
T Consensus 194 ~-~~~-~i~~~~l~~~~~v~D~~y~p~~~t~-ll~~a~~~G~~~~v~ 237 (272)
T 1p77_A 194 G-GTA-SVDAEILKLGSAFYDMQYAKGTDTP-FIALCKSLGLTNVSD 237 (272)
T ss_dssp ------CCCHHHHHHCSCEEESCCCTTSCCH-HHHHHHHTTCCCEEC
T ss_pred C-CCC-CCCHHHcCCCCEEEEeeCCCCcCCH-HHHHHHHcCCCEeeC
Confidence 1 110 01 0124578999999985433143 44556677776 553
No 219
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.10 E-value=9.4e-06 Score=82.76 Aligned_cols=90 Identities=10% Similarity=0.014 Sum_probs=70.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|+|||+|.+|+.+|+.+...|.+|+++|+++.+..+....+ +. ..+++++++. +|+|+++..+..
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G-------~~-vv~LeElL~~---ADIVv~atgt~~-- 314 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDG-------FE-VVTLDDAAST---ADIVVTTTGNKD-- 314 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CE-ECCHHHHGGG---CSEEEECCSSSS--
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcC-------ce-eccHHHHHhh---CCEEEECCCCcc--
Confidence 3799999999999999999999999999999987654433322 22 3478898887 999999875442
Q ss_pred HHHH-HHHhhcccCCCEEEecCCCCc
Q 011394 88 DETI-KTLSAYMEKGDCIIDGGNEWY 112 (487)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~ 112 (487)
++ .+.+..+++|.+||+++....
T Consensus 315 --lI~~e~l~~MK~GAILINvGRgdv 338 (464)
T 3n58_A 315 --VITIDHMRKMKDMCIVGNIGHFDN 338 (464)
T ss_dssp --SBCHHHHHHSCTTEEEEECSSSTT
T ss_pred --ccCHHHHhcCCCCeEEEEcCCCCc
Confidence 23 345567889999999987653
No 220
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.09 E-value=2e-05 Score=81.68 Aligned_cols=119 Identities=18% Similarity=0.191 Sum_probs=80.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccC----CHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFR----DPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~----s~~e~~~~l~~advIi~~ 80 (487)
++||||||+|.||...+..|.+. +++| .++|+++++++++.+.....+......++ +.+++++. .+.|+|++|
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~-~~vD~V~i~ 98 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKD-KNIDAVFVS 98 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTC-TTCCEEEEC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcC-CCCCEEEEc
Confidence 35899999999999999999875 6665 48899999988877632111000134566 89998873 348999999
Q ss_pred cCCChhHHHHHHHHhhcccCCCEEE-ec-CCCCchhHHHHHHHHHHcCCeEE
Q 011394 81 VKAGAPVDETIKTLSAYMEKGDCII-DG-GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiI-d~-st~~~~~~~~~~~~l~~~g~~~i 130 (487)
+|+....+.++. .+..|+.|+ +- -+....+.+++.+..++.|..+.
T Consensus 99 tp~~~h~~~~~~----al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 99 SPWEWHHEHGVA----AMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp CCGGGHHHHHHH----HHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred CCcHHHHHHHHH----HHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 998766554443 344566444 42 23445667777777777776544
No 221
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.08 E-value=1.3e-05 Score=81.11 Aligned_cols=89 Identities=18% Similarity=0.293 Sum_probs=70.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChH------HHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS------KVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~------~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
++|+|||.|+.|.+-|+||.++|.+|++--|... ..+.+.+.+ ++ +.+++|+++. +|+|++.+
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~G-------f~-v~~~~eA~~~---ADvV~~L~ 106 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENG-------FK-VGTYEELIPQ---ADLVINLT 106 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTT-------CE-EEEHHHHGGG---CSEEEECS
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCC-------CE-ecCHHHHHHh---CCEEEEeC
Confidence 5899999999999999999999999999887432 223333322 33 4478999988 99999999
Q ss_pred CCChhHHHHHHHHhhcccCCCEEEecC
Q 011394 82 KAGAPVDETIKTLSAYMEKGDCIIDGG 108 (487)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~s 108 (487)
|+. .-..+++.+.|.|++|+++.-..
T Consensus 107 PD~-~q~~vy~~I~p~lk~G~~L~faH 132 (491)
T 3ulk_A 107 PDK-QHSDVVRTVQPLMKDGAALGYSH 132 (491)
T ss_dssp CGG-GHHHHHHHHGGGSCTTCEEEESS
T ss_pred Chh-hHHHHHHHHHhhCCCCCEEEecC
Confidence 986 45667788999999999987543
No 222
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.07 E-value=2e-05 Score=78.09 Aligned_cols=102 Identities=13% Similarity=0.161 Sum_probs=66.1
Q ss_pred CCCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhc-CC--CCccccCCHHHHHhhcCCCcEEEE
Q 011394 5 KQLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKE-GD--LPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~-g~--~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
+..+||+|||+|.||.++|..|+..|+ +|.++|+++++++......... .. .+++..++..+.++ ++|+||+
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~---~aDvVvi 79 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCK---DADIVCI 79 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGT---TCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhC---CCCEEEE
Confidence 345799999999999999999999997 8999999998876632211100 00 02233333333344 4999999
Q ss_pred ecCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++..+. .++++.+.+..+ .++.+++..||.
T Consensus 80 ~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNP 124 (326)
T 3pqe_A 80 CAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNP 124 (326)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred ecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCCh
Confidence 985431 122333445454 467788888874
No 223
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.05 E-value=1.7e-05 Score=80.96 Aligned_cols=116 Identities=11% Similarity=0.036 Sum_probs=81.5
Q ss_pred CcEEEEcccH---HHHHHHHHHHHCC-CcEE--EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhc----CCCcEE
Q 011394 8 TRIGLAGLAV---MGQNLALNIAEKG-FPIS--VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSI----QKPRVI 77 (487)
Q Consensus 8 ~kIgiIGlG~---mG~~lA~~L~~~G-~~V~--v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l----~~advI 77 (487)
+||||||+|. ||...+..+...+ ++|. ++|+++++.+++.++.... ....++|.+++++.- .+.|+|
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~---~~~~~~~~~~ll~~~~~~~~~vD~V 89 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVD---SERCYADYLSMFEQEARRADGIQAV 89 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCC---GGGBCSSHHHHHHHHTTCTTCCSEE
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCC---cceeeCCHHHHHhcccccCCCCCEE
Confidence 4899999999 9999998888765 6766 5799999999887754210 015788999998741 248999
Q ss_pred EEecCCChhHHHHHHHHhhcccCCCEEEec--CCCCchhHHHHHHHHHHcCCeEE
Q 011394 78 IMLVKAGAPVDETIKTLSAYMEKGDCIIDG--GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 78 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~--st~~~~~~~~~~~~l~~~g~~~i 130 (487)
++|+|+....+.+... +..|+.|+.- -+....+.+++.+..++.|+.+.
T Consensus 90 ~i~tp~~~H~~~~~~a----l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 140 (398)
T 3dty_A 90 SIATPNGTHYSITKAA----LEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVG 140 (398)
T ss_dssp EEESCGGGHHHHHHHH----HHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred EECCCcHHHHHHHHHH----HHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 9999988665544333 3456655542 23344677777777777776553
No 224
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.05 E-value=2.3e-05 Score=77.58 Aligned_cols=99 Identities=15% Similarity=0.151 Sum_probs=65.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhc----C-CCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKE----G-DLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~----g-~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
++||+|||+|.||.++|..|+..|+ +|.++|+++++++......... + ..++..+.+. +..+ ++|+||++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~-~a~~---~aDvVIi~ 80 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDY-KDLE---NSDVVIVT 80 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGT---TCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCH-HHHC---CCCEEEEc
Confidence 5799999999999999999999998 9999999998865333221110 0 0123334444 3334 49999999
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.+.+. .++++.+.+..+. |+.+++..||.
T Consensus 81 ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNP 124 (321)
T 3p7m_A 81 AGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNP 124 (321)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred CCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCc
Confidence 75431 1233335555554 67777777764
No 225
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=98.04 E-value=2e-05 Score=80.89 Aligned_cols=118 Identities=12% Similarity=0.110 Sum_probs=75.7
Q ss_pred CCCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecC
Q 011394 5 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVK 82 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~--~l~~advIi~~vp 82 (487)
+..++|.|||+|.+|..+++.|.+.|++|++.|+++++++.+.+.+.. -+..-.+-.++.. .++++|+||++++
T Consensus 2 ~~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~----vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 2 SHGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMK----VFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCC----CEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCe----EEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 345789999999999999999999999999999999999988765431 0112222233332 2567999999999
Q ss_pred CChhHHHHHHHHhhcccCC-CEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 83 AGAPVDETIKTLSAYMEKG-DCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
++.....++ ..+..+.+. .+|+-..+ + .....+...|+..+-.|
T Consensus 78 ~~~~n~~i~-~~ar~~~p~~~Iiara~~--~----~~~~~L~~~Gad~Vi~~ 122 (413)
T 3l9w_A 78 DPQTNLQLT-EMVKEHFPHLQIIARARD--V----DHYIRLRQAGVEKPERE 122 (413)
T ss_dssp SHHHHHHHH-HHHHHHCTTCEEEEEESS--H----HHHHHHHHTTCSSCEET
T ss_pred ChHHHHHHH-HHHHHhCCCCeEEEEECC--H----HHHHHHHHCCCCEEECc
Confidence 864333333 334445555 44443332 1 23344556676654444
No 226
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.04 E-value=5.4e-06 Score=84.11 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=68.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc----ccCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF----GFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~----~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++|+|||+|.+|..+++.+...|.+|+++|+++++.+.+.+.... .+. ...++++++.. +|+||.+++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~----~~~~~~~~~~~l~~~l~~---aDvVi~~~~~ 241 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG----RIHTRYSSAYELEGAVKR---ADLVIGAVLV 241 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----SSEEEECCHHHHHHHHHH---CSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC----eeEeccCCHHHHHHHHcC---CCEEEECCCc
Confidence 589999999999999999999999999999999988877653321 110 12245566665 9999998864
Q ss_pred Chh-HHHH-HHHHhhcccCCCEEEecC
Q 011394 84 GAP-VDET-IKTLSAYMEKGDCIIDGG 108 (487)
Q Consensus 84 ~~~-v~~v-l~~l~~~l~~g~iiId~s 108 (487)
+.. ...+ .++..+.+++|.+|||.+
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 421 1111 244556788999999998
No 227
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.03 E-value=3.1e-05 Score=80.55 Aligned_cols=74 Identities=16% Similarity=0.248 Sum_probs=53.4
Q ss_pred CCcEEEEcccHHH--HHHHHHHHHC----CCcEEEEeCChHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCc
Q 011394 7 LTRIGLAGLAVMG--QNLALNIAEK----GFPISVYNRTTSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPR 75 (487)
Q Consensus 7 ~~kIgiIGlG~mG--~~lA~~L~~~----G~~V~v~dr~~~~~~~l~~~~~~----~-g~~~~~~~~s~~e~~~~l~~ad 75 (487)
++||+|||+|.|| .++|..|+.. |++|.+||+++++++........ . ...+++.++++++.++. ||
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~d---AD 79 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIID---AD 79 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT---CS
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCC---CC
Confidence 4699999999975 6567788754 89999999999987654332110 0 01145666788777666 99
Q ss_pred EEEEecCC
Q 011394 76 VIIMLVKA 83 (487)
Q Consensus 76 vIi~~vp~ 83 (487)
+||+++|.
T Consensus 80 ~VIiaagv 87 (480)
T 1obb_A 80 FVINTAMV 87 (480)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99999975
No 228
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.03 E-value=2.3e-05 Score=80.30 Aligned_cols=113 Identities=13% Similarity=0.118 Sum_probs=80.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHC---------CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011394 8 TRIGLAGLAVMGQNLALNIAEK---------GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~---------G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advI 77 (487)
.||||||+|.||...+..|.+. +.+|. ++|+++++++++.++... ...+++.++++++ .+.|+|
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~-----~~~y~d~~~ll~~-~~vD~V 100 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGA-----EKAYGDWRELVND-PQVDVV 100 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTC-----SEEESSHHHHHHC-TTCCEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCC-----CeEECCHHHHhcC-CCCCEE
Confidence 4899999999999999888764 23444 789999999998876531 2568899999875 358999
Q ss_pred EEecCCChhHHHHHHHHhhcccCCCEEEec--CCCCchhHHHHHHHHHHcCCeEE
Q 011394 78 IMLVKAGAPVDETIKTLSAYMEKGDCIIDG--GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 78 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~--st~~~~~~~~~~~~l~~~g~~~i 130 (487)
++|+|+....+-++..+ ..|+-|+.- -+....+.+++.+..++.|..+.
T Consensus 101 ~I~tp~~~H~~~~~~al----~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 151 (412)
T 4gqa_A 101 DITSPNHLHYTMAMAAI----AAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTM 151 (412)
T ss_dssp EECSCGGGHHHHHHHHH----HTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred EECCCcHHHHHHHHHHH----HcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeee
Confidence 99999987665554433 455544432 12344566677776666666543
No 229
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=98.02 E-value=4.2e-06 Score=80.90 Aligned_cols=112 Identities=12% Similarity=0.141 Sum_probs=78.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
++|.|||+|.||.+++..|.+.|. +|+++||++++.+++.+... .....++. . ..+|+||.++|.+..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~------~~~~~~~~--~---~~~DivInaTp~gm~ 188 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG------YAYINSLE--N---QQADILVNVTSIGMK 188 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT------CEEESCCT--T---CCCSEEEECSSTTCT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC------Cccchhhh--c---ccCCEEEECCCCCcc
Confidence 579999999999999999999997 89999999999998876532 11111222 2 249999999997642
Q ss_pred HH---HHHHHH-hhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 87 VD---ETIKTL-SAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 87 v~---~vl~~l-~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
.. +.. .+ ...+.++.+++|... .|..| .+.+..+++|..+++..
T Consensus 189 ~~~~~~~~-~~~~~~l~~~~~v~DlvY-~P~~T-~ll~~A~~~G~~~i~Gl 236 (271)
T 1npy_A 189 GGKEEMDL-AFPKAFIDNASVAFDVVA-MPVET-PFIRYAQARGKQTISGA 236 (271)
T ss_dssp TSTTTTSC-SSCHHHHHHCSEEEECCC-SSSSC-HHHHHHHHTTCEEECHH
T ss_pred CccccCCC-CCCHHHcCCCCEEEEeec-CCCCC-HHHHHHHHCCCEEECCH
Confidence 11 000 00 122456889999986 45555 56667778888876543
No 230
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.01 E-value=9e-05 Score=64.80 Aligned_cols=115 Identities=12% Similarity=0.174 Sum_probs=70.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCC-hHHHHHHHHhhhhcCCCCc-cc-cCCHHHHHh-hcCCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRT-TSKVDETVERAKKEGDLPL-FG-FRDPESFVN-SIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~-~~~~~~l~~~~~~~g~~~~-~~-~~s~~e~~~-~l~~advIi~~vp~ 83 (487)
++|.|+|+|.+|..++..|.+.|++|++.|++ +++.+.+.+.... +..+ .. .++.+.+.+ .++++|.||+++++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcC--CCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 47999999999999999999999999999998 5666555532211 0011 11 123333322 25679999999987
Q ss_pred ChhHHHHHHHHhhcc-cCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 84 GAPVDETIKTLSAYM-EKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l-~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
+ .....+...+..+ +...+++...+.. .. +.+...|+..+-
T Consensus 82 d-~~n~~~~~~a~~~~~~~~ii~~~~~~~--~~----~~l~~~G~~~vi 123 (153)
T 1id1_A 82 D-ADNAFVVLSAKDMSSDVKTVLAVSDSK--NL----NKIKMVHPDIIL 123 (153)
T ss_dssp H-HHHHHHHHHHHHHTSSSCEEEECSSGG--GH----HHHHTTCCSEEE
T ss_pred h-HHHHHHHHHHHHHCCCCEEEEEECCHH--HH----HHHHHcCCCEEE
Confidence 6 3343344444444 3456776665432 22 233455665443
No 231
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.01 E-value=4.5e-05 Score=75.26 Aligned_cols=99 Identities=11% Similarity=0.153 Sum_probs=63.9
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCC--hHHHHHHHHhhh----hc-CCCCccccCCHHHHHhhcCCCcEEE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT--TSKVDETVERAK----KE-GDLPLFGFRDPESFVNSIQKPRVII 78 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~--~~~~~~l~~~~~----~~-g~~~~~~~~s~~e~~~~l~~advIi 78 (487)
.+||+|||+|.||.++|..|+..|+ +|.++|++ +++++....... .. ...++..+++.++ ++ ++|+||
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a-~~---~aDvVI 83 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYAD-TA---DSDVVV 83 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGG-GT---TCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHH-hC---CCCEEE
Confidence 4589999999999999999999999 99999999 555443221110 00 0112444445433 33 499999
Q ss_pred EecCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 79 MLVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 79 ~~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++...+. .++++.+.+..+ .++.+++..||.
T Consensus 84 iaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNP 129 (315)
T 3tl2_A 84 ITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNP 129 (315)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCCh
Confidence 9984331 123333455554 467788888864
No 232
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.01 E-value=2.1e-05 Score=76.01 Aligned_cols=112 Identities=17% Similarity=0.156 Sum_probs=76.1
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
+++.|+|+|.||.+++..|++.|.+|+++||++++++++.+.....+ .+. ..+.+++.+ ..+|+||.++|.+..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~--~~~-~~~~~~~~~--~~~DivVn~t~~~~~- 193 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQ-ALSMDELEG--HEFDLIINATSSGIS- 193 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEE-ECCSGGGTT--CCCSEEEECCSCGGG-
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC--Cee-EecHHHhcc--CCCCEEEECCCCCCC-
Confidence 57999999999999999999999999999999999888876532110 111 123333321 249999999987642
Q ss_pred HHHHHHH-hhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011394 88 DETIKTL-SAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (487)
Q Consensus 88 ~~vl~~l-~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (487)
..+ ..+ ...+.++.+++|.+.. |..+. ..+..+++|..
T Consensus 194 ~~~-~~i~~~~l~~~~~v~D~~y~-p~~t~-~~~~a~~~G~~ 232 (271)
T 1nyt_A 194 GDI-PAIPSSLIHPGIYCYDMFYQ-KGKTP-FLAWCEQRGSK 232 (271)
T ss_dssp TCC-CCCCGGGCCTTCEEEESCCC-SSCCH-HHHHHHHTTCC
T ss_pred CCC-CCCCHHHcCCCCEEEEeccC-CcCCH-HHHHHHHcCCC
Confidence 111 001 1235688999999886 44443 44556677765
No 233
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.01 E-value=2.7e-05 Score=77.11 Aligned_cols=101 Identities=9% Similarity=0.052 Sum_probs=69.6
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhh----cCCCCccccCCHHHHHhhcCCCcEEEE
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKK----EGDLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~----~g~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
..+||+|||+|.||.++|..|+..|+ +|.++|+++++++........ ....++..+.++++ ++++|+||+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~----~~daDiVIi 95 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV----SAGSKLVVI 95 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS----CSSCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH----hCCCCEEEE
Confidence 45799999999999999999999997 999999999877654321110 00002344556654 334999999
Q ss_pred ecCCCh---------------hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+...+. .++++.+.+.++ .++.+++..||..
T Consensus 96 taG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPv 141 (330)
T 3ldh_A 96 TAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELG 141 (330)
T ss_dssp CCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred eCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCcc
Confidence 875431 234455666666 6788888888743
No 234
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.00 E-value=1.5e-05 Score=75.53 Aligned_cols=85 Identities=19% Similarity=0.144 Sum_probs=60.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
||||+|+|+|.||+.+++.+.+.++++. ++|++++. . . ++..+++++++. . +|+||-+..+.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~-~------gv~v~~dl~~l~-~---~DVvIDft~p~- 65 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----T-T------PYQQYQHIADVK-G---ADVAIDFSNPN- 65 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC--------C------CSCBCSCTTTCT-T---CSEEEECSCHH-
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----c-C------CCceeCCHHHHh-C---CCEEEEeCChH-
Confidence 6899999999999999999999877665 47988762 1 1 356778888876 5 99998554332
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCch
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYE 113 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~ 113 (487)
.+...+ . +..|.-+|..+|+...
T Consensus 66 a~~~~~----~-l~~g~~vVigTTG~s~ 88 (243)
T 3qy9_A 66 LLFPLL----D-EDFHLPLVVATTGEKE 88 (243)
T ss_dssp HHHHHH----T-SCCCCCEEECCCSSHH
T ss_pred HHHHHH----H-HhcCCceEeCCCCCCH
Confidence 333333 2 6778777778887633
No 235
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.00 E-value=4.5e-05 Score=77.11 Aligned_cols=111 Identities=16% Similarity=0.126 Sum_probs=75.6
Q ss_pred cEEEEcccHHHHHHHHHHHHC--------CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE
Q 011394 9 RIGLAGLAVMGQNLALNIAEK--------GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 9 kIgiIGlG~mG~~lA~~L~~~--------G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
||||||+|.||..-+..+... +.+| .++|+++++++++.++... ...++|.++++++ ++.|+|++
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~-----~~~y~d~~ell~~-~~iDaV~I 100 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGF-----EKATADWRALIAD-PEVDVVSV 100 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTC-----SEEESCHHHHHHC-TTCCEEEE
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCC-----CeecCCHHHHhcC-CCCcEEEE
Confidence 799999999999877766432 3454 4789999999998876531 2468899999875 45899999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEec--CCCCchhHHHHHHHHHHcCCeE
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDG--GNEWYENTERREKAMAELGLLY 129 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~--st~~~~~~~~~~~~l~~~g~~~ 129 (487)
|+|+....+.++..+ ..|+-|+.- -+....+.+++.+..++.|..+
T Consensus 101 atP~~~H~~~a~~al----~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 148 (393)
T 4fb5_A 101 TTPNQFHAEMAIAAL----EAGKHVWCEKPMAPAYADAERMLATAERSGKVA 148 (393)
T ss_dssp CSCGGGHHHHHHHHH----HTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCE
T ss_pred CCChHHHHHHHHHHH----hcCCeEEEccCCcccHHHHHHhhhhHHhcCCcc
Confidence 999987666554443 456544442 1233456667777766766544
No 236
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.99 E-value=5.3e-05 Score=77.85 Aligned_cols=116 Identities=13% Similarity=0.223 Sum_probs=80.3
Q ss_pred CcEEEEcccH---HHHHHHHHHHHCC-CcEE--EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhc----CCCcEE
Q 011394 8 TRIGLAGLAV---MGQNLALNIAEKG-FPIS--VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSI----QKPRVI 77 (487)
Q Consensus 8 ~kIgiIGlG~---mG~~lA~~L~~~G-~~V~--v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l----~~advI 77 (487)
+||||||+|. ||...+..+...+ ++|. ++|+++++.+++.++.... ....+++++++++.- .+.|+|
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~---~~~~~~~~~~ll~~~~~~~~~vD~V 114 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLD---PSRVYSDFKEMAIREAKLKNGIEAV 114 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCC---GGGBCSCHHHHHHHHHHCTTCCSEE
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCC---cccccCCHHHHHhcccccCCCCcEE
Confidence 4899999999 9999988888776 5765 6799999999888764210 015788999998741 248999
Q ss_pred EEecCCChhHHHHHHHHhhcccCCCEEE-ecC-CCCchhHHHHHHHHHHcCCeEE
Q 011394 78 IMLVKAGAPVDETIKTLSAYMEKGDCII-DGG-NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 78 i~~vp~~~~v~~vl~~l~~~l~~g~iiI-d~s-t~~~~~~~~~~~~l~~~g~~~i 130 (487)
++|+|+....+-+.. .+..|+.|+ +-- +....+.+++.+..++.|+.+.
T Consensus 115 ~I~tp~~~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 165 (417)
T 3v5n_A 115 AIVTPNHVHYAAAKE----FLKRGIHVICDKPLTSTLADAKKLKKAADESDALFV 165 (417)
T ss_dssp EECSCTTSHHHHHHH----HHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEE
T ss_pred EECCCcHHHHHHHHH----HHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 999999866544333 344566444 421 3445677777777777776543
No 237
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.99 E-value=2.1e-05 Score=81.34 Aligned_cols=119 Identities=20% Similarity=0.208 Sum_probs=83.0
Q ss_pred CcEEEEcc----cHHHHHHHHHHHHC--CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 8 TRIGLAGL----AVMGQNLALNIAEK--GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 8 ~kIgiIGl----G~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
+||||||+ |.||..++..|.+. +++| .++|+++++.+++.++.... .+..+++++++++. .+.|+|++|
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~---~~~~~~~~~~ll~~-~~vD~V~i~ 96 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLS---NATAFPTLESFASS-STIDMIVIA 96 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCT---TCEEESSHHHHHHC-SSCSEEEEC
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCC---cceeeCCHHHHhcC-CCCCEEEEe
Confidence 58999999 99999999999986 6776 58999999988887753210 12467899999873 248999999
Q ss_pred cCCChhHHHHHHHHhhc--cc-CCCEEEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011394 81 VKAGAPVDETIKTLSAY--ME-KGDCIIDG-GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 81 vp~~~~v~~vl~~l~~~--l~-~g~iiId~-st~~~~~~~~~~~~l~~~g~~~i 130 (487)
+|+....+.++..+... .+ ...++++- .+....+.+++.+.+++.|+.+.
T Consensus 97 tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 150 (438)
T 3btv_A 97 IQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTI 150 (438)
T ss_dssp SCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEE
T ss_pred CCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 99876555444433221 00 02466663 44556677777777777776554
No 238
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.96 E-value=2.3e-05 Score=78.47 Aligned_cols=114 Identities=11% Similarity=0.164 Sum_probs=75.2
Q ss_pred CCcEEEEcccHHHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
|+||||||+|.||.. .+..+.+. +++|. ++|++ +.+++.++.... ++..+++++++++. .+.|+|++|+|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~~---~~~~~~~~~~ll~~-~~~D~V~i~tp~ 75 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAPFKEK---GVNFTADLNELLTD-PEIELITICTPA 75 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHHHHTT---TCEEESCTHHHHSC-TTCCEEEECSCG
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHhhCCC---CCeEECCHHHHhcC-CCCCEEEEeCCc
Confidence 469999999999994 56556554 66765 78988 445555442111 35678899999874 348999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEE-ecC-CCCchhHHHHHHHHHHcCCeEE
Q 011394 84 GAPVDETIKTLSAYMEKGDCII-DGG-NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiI-d~s-t~~~~~~~~~~~~l~~~g~~~i 130 (487)
....+.+... +..|+.|+ +-- +..+.+.+++.+..+++|+.+.
T Consensus 76 ~~h~~~~~~a----l~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 120 (349)
T 3i23_A 76 HTHYDLAKQA----ILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVM 120 (349)
T ss_dssp GGHHHHHHHH----HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHH----HHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 7655544333 34565444 321 3345667777777777776554
No 239
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.94 E-value=2e-05 Score=80.67 Aligned_cols=96 Identities=21% Similarity=0.258 Sum_probs=66.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
-++|+|||+|.||..+++.|...|. +|+++||++++.+++.+.... ......++.+.+.. +|+||.++|.+.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~----~~~~~~~l~~~l~~---aDvVi~at~~~~ 239 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG----EAVRFDELVDHLAR---SDVVVSATAAPH 239 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC----EECCGGGHHHHHHT---CSEEEECCSSSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC----ceecHHhHHHHhcC---CCEEEEccCCCC
Confidence 3589999999999999999999998 999999999988776654321 11123456666665 999999998765
Q ss_pred hHH--HHHHH-Hhh-cccCCCEEEecCC
Q 011394 86 PVD--ETIKT-LSA-YMEKGDCIIDGGN 109 (487)
Q Consensus 86 ~v~--~vl~~-l~~-~l~~g~iiId~st 109 (487)
.+. ..+.. +.+ .-.++.++||.+.
T Consensus 240 ~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 240 PVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp CCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred ceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 432 23332 211 1124557777764
No 240
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.94 E-value=3.7e-05 Score=79.34 Aligned_cols=73 Identities=11% Similarity=0.235 Sum_probs=55.9
Q ss_pred CcEEEEcccHH--HHHHHHHHHH----CCCcEEEEeCChHHHHHHHHhhhhc--CCCCccccCCHHHHHhhcCCCcEEEE
Q 011394 8 TRIGLAGLAVM--GQNLALNIAE----KGFPISVYNRTTSKVDETVERAKKE--GDLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 8 ~kIgiIGlG~m--G~~lA~~L~~----~G~~V~v~dr~~~~~~~l~~~~~~~--g~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
+||+|||.|.| |.+++..|+. .| +|.+||+++++++......... ...+++.+++++++++. +|+||+
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~d---ADfVI~ 81 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSA---ADIVII 81 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTT---CSEEEE
T ss_pred CEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcC---CCEEEe
Confidence 59999999997 5789988886 56 9999999998877654322110 01146678899988887 999999
Q ss_pred ecCCC
Q 011394 80 LVKAG 84 (487)
Q Consensus 80 ~vp~~ 84 (487)
+++.+
T Consensus 82 airvG 86 (450)
T 3fef_A 82 SILPG 86 (450)
T ss_dssp CCCSS
T ss_pred ccccC
Confidence 99754
No 241
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.94 E-value=3.6e-05 Score=75.87 Aligned_cols=99 Identities=11% Similarity=0.069 Sum_probs=63.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHH----HhhhhcCCCCcccc-CCHHHHHhhcCCCcEEEEe
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETV----ERAKKEGDLPLFGF-RDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~----~~~~~~g~~~~~~~-~s~~e~~~~l~~advIi~~ 80 (487)
|||+|||+|.||.++|..|+..|+ +|.++|+++++++... +..... ..+.... ++..+..+ ++|+||++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~-~~~~~v~~~~~~~a~~---~aDvVii~ 76 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIH-GFDTRVTGTNDYGPTE---DSDVCIIT 76 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHH-TCCCEEEEESSSGGGT---TCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccccc-CCCcEEEECCCHHHhC---CCCEEEEC
Confidence 699999999999999999999887 9999999998765322 211000 0012222 23333344 49999999
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
.+.+. .++++.+.+..+ .|..+++..||..
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPv 121 (314)
T 3nep_X 77 AGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPL 121 (314)
T ss_dssp CCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSH
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCch
Confidence 86542 122333445454 4777888888743
No 242
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.93 E-value=8.1e-06 Score=82.16 Aligned_cols=85 Identities=27% Similarity=0.474 Sum_probs=62.6
Q ss_pred CCCCHHHHHHHHHhhccCc-chhhhHhhhccccccccCCCCchhHHhhhhccCCCCchHHHHHHHHHcCCCchhHHHHHH
Q 011394 215 GKLTNEELQNVFTEWNKGE-LLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLD 293 (487)
Q Consensus 215 g~i~~~~i~~v~~~~~~~~-~~s~~~~~~~~~l~~~~~~~~~~~l~~i~~~~~~kgtg~~~~~~a~~~gv~~P~~~~a~~ 293 (487)
+ +|.+++.++ |+.|. ++||+++++.+++..+ |. ++.+.+.+.++|+|+|+++.|.+.|+|+|++++|++
T Consensus 259 ~-~d~~~i~~~---~~~g~~~~s~~l~~~~~~~~~~----p~--~~~~~~~~~d~g~~r~~~~~A~~~gvp~p~~~~al~ 328 (358)
T 4e21_A 259 D-LDLADITEV---WRRGSVISSWLLDLSATALLDS----PD--LQEFQGRVSDSGEGRWTVAAAIDEGVPAHVLSSALY 328 (358)
T ss_dssp C-CCHHHHHHH---HTTTSTTCBHHHHHHHHHHHHC----TT--CTTC--CCCCCSHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred C-CCHHHHHHH---HhCccHHHHHHHHHHHHHHhhC----CC--hHHHHHHHHhcCcHHHHHHHHHHcCCChHHHHHHHH
Confidence 5 777776555 78876 7999999998887653 21 123344555688999999999999999999999999
Q ss_pred HHHhhccchHHHHHHHhh
Q 011394 294 ARFLSGLKEERVEAAKVF 311 (487)
Q Consensus 294 ~r~~s~~~~~r~~~~~~~ 311 (487)
.|+.|. .+|..+++++
T Consensus 329 ~~~~s~--~~~~~~~~l~ 344 (358)
T 4e21_A 329 ERFSSR--GEDDFANRLL 344 (358)
T ss_dssp HHHHHT--TTTHHHHHHH
T ss_pred HHHHHC--CCcccHHHHH
Confidence 999984 3444444444
No 243
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=97.93 E-value=3.5e-05 Score=80.13 Aligned_cols=74 Identities=15% Similarity=0.280 Sum_probs=54.1
Q ss_pred CcEEEEcccHH-HHHHHHHHHHC-----CCcEEEEeCChHHHHHHHHhhh----hcC-CCCccccCCHHHHHhhcCCCcE
Q 011394 8 TRIGLAGLAVM-GQNLALNIAEK-----GFPISVYNRTTSKVDETVERAK----KEG-DLPLFGFRDPESFVNSIQKPRV 76 (487)
Q Consensus 8 ~kIgiIGlG~m-G~~lA~~L~~~-----G~~V~v~dr~~~~~~~l~~~~~----~~g-~~~~~~~~s~~e~~~~l~~adv 76 (487)
+||+|||+|.+ |.++|..|+.. +++|.+||+++++++....... ..+ ..++..+++.++.++. +|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~---AD~ 105 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTD---VDF 105 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSS---CSE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcC---CCE
Confidence 48999999998 66688888887 6799999999998765432111 000 1135566788777776 999
Q ss_pred EEEecCCC
Q 011394 77 IIMLVKAG 84 (487)
Q Consensus 77 Ii~~vp~~ 84 (487)
||+++|.+
T Consensus 106 VViaag~~ 113 (472)
T 1u8x_X 106 VMAHIRVG 113 (472)
T ss_dssp EEECCCTT
T ss_pred EEEcCCCc
Confidence 99999874
No 244
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.93 E-value=4.6e-05 Score=76.58 Aligned_cols=112 Identities=17% Similarity=0.234 Sum_probs=76.1
Q ss_pred CCCcEEEEcccHHHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 6 QLTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
+++||||||+|.||.. .+..|.+. +++|. ++|+++++. .+... ....++++++++++ .+.|+|++|+|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~---~~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp 74 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEV---KRDFP-----DAEVVHELEEITND-PAIELVIVTTP 74 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHH---HHHCT-----TSEEESSTHHHHTC-TTCCEEEECSC
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH---HhhCC-----CCceECCHHHHhcC-CCCCEEEEcCC
Confidence 3469999999999997 67777665 66765 789998763 22221 25678899999873 34899999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEe-cC-CCCchhHHHHHHHHHHcCCeEE
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIID-GG-NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId-~s-t~~~~~~~~~~~~l~~~g~~~i 130 (487)
+....+.+.. .+..|+.|+. -- +....+.+++.+..++.|+.+.
T Consensus 75 ~~~H~~~~~~----al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~ 120 (358)
T 3gdo_A 75 SGLHYEHTMA----CIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLS 120 (358)
T ss_dssp TTTHHHHHHH----HHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred cHHHHHHHHH----HHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 9866554443 3445665444 21 3445667777777777776544
No 245
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.92 E-value=5.7e-05 Score=74.66 Aligned_cols=100 Identities=11% Similarity=0.162 Sum_probs=64.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcC--CCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEG--DLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~g--~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
+||+|||+|.+|.+++..|+..+. +|.++|+++++++.......... ..+++...+..+..+ ++|+||++.+.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~---~aDvVii~ag~ 82 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCK---DADLVVITAGA 82 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGT---TCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhC---CCCEEEECCCC
Confidence 799999999999999999998886 89999999988775433221100 002222223333344 49999999865
Q ss_pred Ch---------------hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 84 GA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 84 ~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+. .++++.+.+..+ .++.+++..||..
T Consensus 83 ~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv 124 (318)
T 1ez4_A 83 PQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPV 124 (318)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcH
Confidence 42 123333455555 4677777776643
No 246
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.91 E-value=5.2e-05 Score=74.60 Aligned_cols=97 Identities=16% Similarity=0.270 Sum_probs=65.6
Q ss_pred cEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh----cC-CCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 9 RIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK----EG-DLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 9 kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~----~g-~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
||+|||+|.||.+++..|+..|+ +|.++|+++++++........ .. ..+++.+.+. +..+ ++|+||++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~---~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMR---GSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGT---TCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhC---CCCEEEEeCC
Confidence 69999999999999999998888 799999998877543322111 00 1134444555 3334 4999999976
Q ss_pred CCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 83 AGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 83 ~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.+. .++++.+.+.++. ++.++|..||.
T Consensus 77 ~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP 118 (308)
T 2d4a_B 77 IGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTNP 118 (308)
T ss_dssp CCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCc
Confidence 543 1445556666654 67777777773
No 247
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.91 E-value=4.4e-05 Score=79.44 Aligned_cols=116 Identities=12% Similarity=0.148 Sum_probs=78.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~--~~s~~e~~~~l~~advIi~~vp~ 83 (487)
+++|.|||+|.+|..++..|++. |++|+++||++++++++.+.... .... ..+.+++.+.++++|+||.++|.
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~----~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGS----KAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTC----EEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCC----cEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 46899999999999999999998 78999999999998887754110 0101 12333332222349999999987
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
... ..+... .+..|..++|.+...|. ...+.+.+++.|+.+++
T Consensus 99 ~~~-~~v~~a---~l~~g~~vvd~~~~~p~-~~~Ll~~Ak~aGv~~i~ 141 (467)
T 2axq_A 99 TFH-PNVVKS---AIRTKTDVVTSSYISPA-LRELEPEIVKAGITVMN 141 (467)
T ss_dssp GGH-HHHHHH---HHHHTCEEEECSCCCHH-HHHHHHHHHHHTCEEEC
T ss_pred hhh-HHHHHH---HHhcCCEEEEeecCCHH-HHHHHHHHHHcCCEEEe
Confidence 532 233322 34568889998764543 44566667777887664
No 248
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.90 E-value=2.1e-05 Score=79.52 Aligned_cols=95 Identities=13% Similarity=0.144 Sum_probs=66.9
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc----ccCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF----GFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~----~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
++|+|+|+|.+|..+++.+...|++|+++||++++.+.+.+.... .+. ...++++++.. +|+||.+++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~----~~~~~~~~~~~l~~~~~~---~DvVi~~~g~ 239 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG----RVITLTATEANIKKSVQH---ADLLIGAVLV 239 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----SEEEEECCHHHHHHHHHH---CSEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc----eEEEecCCHHHHHHHHhC---CCEEEECCCC
Confidence 689999999999999999999999999999999988776653321 111 12234555555 9999999975
Q ss_pred Ch-hHHHH-HHHHhhcccCCCEEEecCC
Q 011394 84 GA-PVDET-IKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 84 ~~-~v~~v-l~~l~~~l~~g~iiId~st 109 (487)
+. ....+ .+...+.+++|.+|||.+.
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC-
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEec
Confidence 42 11111 2455677788999999984
No 249
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.89 E-value=1.5e-05 Score=81.42 Aligned_cols=93 Identities=11% Similarity=0.180 Sum_probs=65.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcccc-------------------------C
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGF-------------------------R 62 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~-------------------------~ 62 (487)
.+|+|||+|.+|...++.+...|.+|+++|+++++.+.+.+.+.. .... .
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 247 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAE-----FLELDFKEEAGSGDGYAKVMSDAFIKAEME 247 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCE-----ECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCE-----EEEecccccccccccchhhccHHHHHHHHH
Confidence 589999999999999999999999999999999988776544321 1100 0
Q ss_pred CHHHHHhhcCCCcEEEEe--cCCChhHHHHH-HHHhhcccCCCEEEecCC
Q 011394 63 DPESFVNSIQKPRVIIML--VKAGAPVDETI-KTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 63 s~~e~~~~l~~advIi~~--vp~~~~v~~vl-~~l~~~l~~g~iiId~st 109 (487)
++++++.. +|+||.+ +|... ...++ ++....+++|.+|||++.
T Consensus 248 ~l~e~~~~---aDvVI~~~~~pg~~-ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 248 LFAAQAKE---VDIIVTTALIPGKP-APKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHHH---CSEEEECCCCTTSC-CCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHHHhCC---CCEEEECCccCCCC-CCeeeCHHHHhcCCCCcEEEEEcC
Confidence 24555555 9999999 44211 11112 344556788999999985
No 250
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.89 E-value=7.6e-05 Score=74.04 Aligned_cols=102 Identities=11% Similarity=0.109 Sum_probs=65.9
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcC--CCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEG--DLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~g--~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
+.+||+|||+|.+|.+++..|+..+. +|.++|+++++++.......... ..+++...+..+..+. +|+||++.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~---aDvVii~a 84 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKD---ADLVVITA 84 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGG---CSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCC---CCEEEEcC
Confidence 45799999999999999999998886 89999999988765433221100 0022232333444454 99999998
Q ss_pred CCCh---------------hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 82 KAGA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 82 p~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+.+. .++++.+.+..+ .+..+|+..||..
T Consensus 85 g~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv 128 (326)
T 2zqz_A 85 GAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANPV 128 (326)
T ss_dssp CCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSSH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCcH
Confidence 6542 122333445454 4677777776643
No 251
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.87 E-value=3.1e-05 Score=78.01 Aligned_cols=112 Identities=16% Similarity=0.202 Sum_probs=76.4
Q ss_pred CCCcEEEEcccHHHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 6 QLTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
+++||||||+|.||.. .+..|.+. +++|. ++|++++++. +... ....+++.+++++. .+.|+|++|+|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~---~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp 74 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK---ERYP-----QASIVRSFKELTED-PEIDLIVVNTP 74 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG---TTCT-----TSEEESCSHHHHTC-TTCCEEEECSC
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH---HhCC-----CCceECCHHHHhcC-CCCCEEEEeCC
Confidence 3468999999999997 67777765 67765 7899987632 2111 35678899999874 45899999999
Q ss_pred CChhHHHHHHHHhhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011394 83 AGAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i 130 (487)
+....+.+... +..|+ ++++-- +....+.+++.+..++.|+.+.
T Consensus 75 ~~~H~~~~~~a----l~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (362)
T 3fhl_A 75 DNTHYEYAGMA----LEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLS 120 (362)
T ss_dssp GGGHHHHHHHH----HHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHHHH----HHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 87665544333 34565 444422 3455677777777777776554
No 252
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.87 E-value=9.8e-05 Score=73.60 Aligned_cols=75 Identities=15% Similarity=0.199 Sum_probs=54.6
Q ss_pred CCCCcEEEEcc-cHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhc--CCCCccccCCHHHHHhhcCCCcEEEE
Q 011394 5 KQLTRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKE--GDLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 5 ~~~~kIgiIGl-G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~--g~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
..++||+|||+ |.+|.++|..++..|. +|.++|+++++++......... ...++..+++..+.+++ +|+||+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d---ADvVvi 82 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD---AKYIVS 82 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT---EEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC---CCEEEE
Confidence 34679999997 9999999999999984 8999999998766532211110 01134556677776666 999999
Q ss_pred ecC
Q 011394 80 LVK 82 (487)
Q Consensus 80 ~vp 82 (487)
+..
T Consensus 83 taG 85 (343)
T 3fi9_A 83 SGG 85 (343)
T ss_dssp CCC
T ss_pred ccC
Confidence 974
No 253
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.85 E-value=4e-05 Score=74.67 Aligned_cols=111 Identities=16% Similarity=0.061 Sum_probs=75.4
Q ss_pred CCCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecC
Q 011394 6 QLTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~--~l~~advIi~~vp 82 (487)
+.+||+|+|+ |.||..+++++.+.|++ .++..+|.+.. +. .. ++..+.|++|+.+ . +|++++++|
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g---~~--~~---G~~vy~sl~el~~~~~---~D~viI~tP 73 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGG---TT--HL---GLPVFNTVREAVAATG---ATASVIYVP 73 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT---CE--ET---TEEEESSHHHHHHHHC---CCEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCccc---ce--eC---CeeccCCHHHHhhcCC---CCEEEEecC
Confidence 4469999998 99999999999998998 44555554210 00 11 3677889999987 5 999999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCc-hhHHHHHHHHHHcCCeEEe
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWY-ENTERREKAMAELGLLYLG 131 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~~l~~~g~~~i~ 131 (487)
+. ...+++.+.... .. +.+|..+++.+ .+.+++.+.+++.|+.+++
T Consensus 74 ~~-~~~~~~~ea~~~-Gi-~~iVi~t~G~~~~~~~~l~~~A~~~gv~liG 120 (288)
T 2nu8_A 74 AP-FCKDSILEAIDA-GI-KLIITITEGIPTLDMLTVKVKLDEAGVRMIG 120 (288)
T ss_dssp GG-GHHHHHHHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred HH-HHHHHHHHHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 87 455555555442 11 34444555443 3445667777778987764
No 254
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.84 E-value=8e-05 Score=77.21 Aligned_cols=115 Identities=11% Similarity=0.142 Sum_probs=77.2
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc----ccCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF----GFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~----~~~s~~e~~~~l~~advIi~~vp 82 (487)
+++|.|+|+|.||..++..|++.|++|+++||++++++++.+... ++. -..+.+++.+.++++|+||.++|
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~-----~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-----HSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT-----TEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC-----CceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 468999999999999999999999999999999998877654321 011 12233333332334999999998
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
..... .+.. ..+.+|..++|.+...+. +..+.+.+++.|+.++.
T Consensus 78 ~~~~~-~i~~---a~l~~g~~vvd~~~~~~~-~~~l~~aA~~aGv~~i~ 121 (450)
T 1ff9_A 78 YTFHA-TVIK---SAIRQKKHVVTTSYVSPA-MMELDQAAKDAGITVMN 121 (450)
T ss_dssp --CHH-HHHH---HHHHHTCEEEESSCCCHH-HHHTHHHHHHTTCEEEC
T ss_pred cccch-HHHH---HHHhCCCeEEEeecccHH-HHHHHHHHHHCCCeEEe
Confidence 75322 2222 224567888888765543 45666777788887663
No 255
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.84 E-value=1.5e-05 Score=77.00 Aligned_cols=112 Identities=14% Similarity=0.054 Sum_probs=77.0
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.+++.|+|+|-+|.+++..|++.|. +|+++||++++.+++.+.... + ++.. .+.+++.. ..+|+||.++|.+.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~--~~~~-~~~~~l~~--~~~DivInaTp~gm 193 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S--RLRI-SRYEALEG--QSFDIVVNATSASL 193 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T--TEEE-ECSGGGTT--CCCSEEEECSSGGG
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C--CeeE-eeHHHhcc--cCCCEEEECCCCCC
Confidence 3579999999999999999999996 999999999999998876431 0 1121 23333321 24999999998763
Q ss_pred hHHH-HHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011394 86 PVDE-TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (487)
Q Consensus 86 ~v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (487)
.-+. .+. ...+.++.+|+|+... |..|. +.+..+++|..
T Consensus 194 ~~~~~~i~--~~~l~~~~~V~DlvY~-P~~T~-ll~~A~~~G~~ 233 (272)
T 3pwz_A 194 TADLPPLP--ADVLGEAALAYELAYG-KGLTP-FLRLAREQGQA 233 (272)
T ss_dssp GTCCCCCC--GGGGTTCSEEEESSCS-CCSCH-HHHHHHHHSCC
T ss_pred CCCCCCCC--HHHhCcCCEEEEeecC-CCCCH-HHHHHHHCCCC
Confidence 2110 010 1346789999999775 44443 45556677765
No 256
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.82 E-value=5.3e-05 Score=77.52 Aligned_cols=120 Identities=18% Similarity=0.177 Sum_probs=76.0
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC---CcEEEEeCChHHHHHHHHhhhhcCCCCccc-------cCCHHHHHhhcCCCcE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG---FPISVYNRTTSKVDETVERAKKEGDLPLFG-------FRDPESFVNSIQKPRV 76 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G---~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-------~~s~~e~~~~l~~adv 76 (487)
|+||+|||+|.+|..++..|++.| .+|.++||++++.+++.+.....+..++.. ..+++++++.. ++|+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-KPQI 79 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-CCCE
Confidence 568999999999999999999998 389999999999988876543200000111 12234444431 2799
Q ss_pred EEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchh--------HHHHHHHHHHcCCeEEe
Q 011394 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYEN--------TERREKAMAELGLLYLG 131 (487)
Q Consensus 77 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~--------~~~~~~~l~~~g~~~i~ 131 (487)
||.+.+... ...+++.. +..|..++|.+...+.+ ..++.+.+++.|+.++.
T Consensus 80 Vin~ag~~~-~~~v~~a~---l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~ 138 (405)
T 4ina_A 80 VLNIALPYQ-DLTIMEAC---LRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALL 138 (405)
T ss_dssp EEECSCGGG-HHHHHHHH---HHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEE
T ss_pred EEECCCccc-ChHHHHHH---HHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEE
Confidence 999987653 33344333 34677788876543331 12445556666776553
No 257
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.82 E-value=4.3e-05 Score=74.28 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=78.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcC-CCCccccC--CHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEG-DLPLFGFR--DPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g-~~~~~~~~--s~~e~~~~l~~advIi~~vp~ 83 (487)
+++.|+|+|-+|.+++..|++.|. +|+++||++++.+++.+...... ...+...+ ++.+.+.. +|+||-++|.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~---~DiVInaTp~ 204 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAA---ADGVVNATPM 204 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHH---SSEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhc---CCEEEECCCC
Confidence 479999999999999999999998 69999999999988876543210 00122333 66676666 9999999986
Q ss_pred ChhHHH--HHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011394 84 GAPVDE--TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 84 ~~~v~~--vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i 130 (487)
+..-.. .+ -...+.++.+|+|..-. |..| .+.+..+++|...+
T Consensus 205 Gm~~~~~~pi--~~~~l~~~~~v~DlvY~-P~~T-~ll~~A~~~G~~~~ 249 (283)
T 3jyo_A 205 GMPAHPGTAF--DVSCLTKDHWVGDVVYM-PIET-ELLKAARALGCETL 249 (283)
T ss_dssp TSTTSCSCSS--CGGGCCTTCEEEECCCS-SSSC-HHHHHHHHHTCCEE
T ss_pred CCCCCCCCCC--CHHHhCCCCEEEEecCC-CCCC-HHHHHHHHCcCeEe
Confidence 521100 01 12346788999998754 3333 23444556676544
No 258
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.81 E-value=4.4e-05 Score=75.66 Aligned_cols=125 Identities=15% Similarity=0.182 Sum_probs=77.0
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC---------CCcEE-EEeCChHHHH-----H-HHHhhhhcCCCCccccC--CHHHHH
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK---------GFPIS-VYNRTTSKVD-----E-TVERAKKEGDLPLFGFR--DPESFV 68 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~---------G~~V~-v~dr~~~~~~-----~-l~~~~~~~g~~~~~~~~--s~~e~~ 68 (487)
|+||||||+|.||..++..|.+. +.+|. ++|+++++.+ + +...... ...++ ++++++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~-----~~~~~~~d~~~ll 76 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRET-----GMLRDDAKAIEVV 76 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHH-----SSCSBCCCHHHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccC-----ccccCCCCHHHHh
Confidence 57999999999999999999875 44554 6688865422 1 2211111 12344 899998
Q ss_pred hhcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCch-hHHHHHHHHHHcCCeEE-ecCCCCC
Q 011394 69 NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAELGLLYL-GMGVSGG 137 (487)
Q Consensus 69 ~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~i-~~pvsgg 137 (487)
++ .+.|+|+.|+|+.....+..+-....+..|..|+..+..... ...++.+..+++|..|+ ++-+.++
T Consensus 77 ~~-~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g 146 (327)
T 3do5_A 77 RS-ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGA 146 (327)
T ss_dssp HH-SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTT
T ss_pred cC-CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeec
Confidence 75 348999999997643111333445667789988877553221 23344555566787655 4444443
No 259
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.81 E-value=0.0001 Score=72.97 Aligned_cols=102 Identities=12% Similarity=0.128 Sum_probs=66.4
Q ss_pred CCCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCC--CCccccCCHHHHHhhcCCCcEEEEe
Q 011394 5 KQLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGD--LPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 5 ~~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~g~--~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
+..+||+|||+|.||.++|..|+..|+ +|.++|+++++++........... .+++..++..+..+ ++|+||++
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~---~aDiVvi~ 83 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAK---DADLVVIT 83 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGT---TCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhc---CCCEEEEC
Confidence 346799999999999999999999987 899999999887744332211000 02233333334344 49999998
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
...+. .++++.+.+..+ .|+.+++..||.
T Consensus 84 ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvtNP 127 (326)
T 3vku_A 84 AGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANP 127 (326)
T ss_dssp CCCC----------------CHHHHHHHHHTT-TCCSEEEECSSS
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEccCc
Confidence 75431 123333455554 467788888764
No 260
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.79 E-value=0.0001 Score=72.60 Aligned_cols=100 Identities=10% Similarity=0.186 Sum_probs=64.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCC--CcEEEEeCChHHHHHHHHhhhhcC--CCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKKEG--DLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~~~g--~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
|||+|||+|.+|.+++..|+..+ .+|.++|+++++++.......... ..+++...+..+.. +++|+||++.+.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~---~~aD~Vii~ag~ 77 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDL---EGARAVVLAAGV 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGG---TTEEEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHh---CCCCEEEECCCC
Confidence 68999999999999999999987 589999999988775433221100 00122222223333 449999998865
Q ss_pred Chh---------------HHHHHHHHhhcccCCCEEEecCCCC
Q 011394 84 GAP---------------VDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 84 ~~~---------------v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+.. ++++.+.+.++ .+..+++..||..
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv 119 (310)
T 2xxj_A 78 AQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPV 119 (310)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred CCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCch
Confidence 431 23333455555 4667777776643
No 261
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.79 E-value=8.6e-05 Score=76.80 Aligned_cols=75 Identities=12% Similarity=0.121 Sum_probs=54.2
Q ss_pred CCcEEEEcccHH-HHHHHHHHHHC-----CCcEEEEeCCh--HHHHHHH---Hhhh-hcC-CCCccccCCHHHHHhhcCC
Q 011394 7 LTRIGLAGLAVM-GQNLALNIAEK-----GFPISVYNRTT--SKVDETV---ERAK-KEG-DLPLFGFRDPESFVNSIQK 73 (487)
Q Consensus 7 ~~kIgiIGlG~m-G~~lA~~L~~~-----G~~V~v~dr~~--~~~~~l~---~~~~-~~g-~~~~~~~~s~~e~~~~l~~ 73 (487)
.+||+|||+|.+ |.+++..|+.. +.+|.+||+++ ++++... +... ..+ ..++..+++..+.++.
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g--- 83 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG--- 83 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT---
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC---
Confidence 469999999999 88888888874 56899999999 8866532 2110 000 1135556777777776
Q ss_pred CcEEEEecCCC
Q 011394 74 PRVIIMLVKAG 84 (487)
Q Consensus 74 advIi~~vp~~ 84 (487)
+|+||++++.+
T Consensus 84 AD~VVitagv~ 94 (450)
T 1s6y_A 84 ADFVTTQFRVG 94 (450)
T ss_dssp CSEEEECCCTT
T ss_pred CCEEEEcCCCC
Confidence 99999999865
No 262
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.79 E-value=0.00011 Score=74.38 Aligned_cols=113 Identities=14% Similarity=0.136 Sum_probs=79.4
Q ss_pred CCcEEEEc-ccHHHHH-HH----HHHHHCC-CcE----------EEEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHH
Q 011394 7 LTRIGLAG-LAVMGQN-LA----LNIAEKG-FPI----------SVYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFV 68 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~-lA----~~L~~~G-~~V----------~v~dr~~~~~~~l~~~~~~~g~~~~-~~~~s~~e~~ 68 (487)
.+|||||| +|.||.. .+ ..+.+.+ ..+ .++|+++++.+++.++.. + ..++++++++
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~------~~~~~~~~~~ll 79 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFN------IARWTTDLDAAL 79 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTT------CCCEESCHHHHH
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhC------CCcccCCHHHHh
Confidence 35899999 9999998 66 6666554 222 499999999998887542 3 4678999998
Q ss_pred hhcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecC--CCCchhHHHHHHHHHHcCCeEE
Q 011394 69 NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGG--NEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 69 ~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~i 130 (487)
+. .+.|+|++|+|+..+.+-+.. .+..|+.|+.-- +....+.+++.+..++.|+.+.
T Consensus 80 ~~-~~iD~V~i~tp~~~h~~~~~~----al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~ 138 (383)
T 3oqb_A 80 AD-KNDTMFFDAATTQARPGLLTQ----AINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHG 138 (383)
T ss_dssp HC-SSCCEEEECSCSSSSHHHHHH----HHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred cC-CCCCEEEECCCchHHHHHHHH----HHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 75 458999999998766554433 345666665421 3344567777777777776544
No 263
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.78 E-value=0.00012 Score=73.75 Aligned_cols=111 Identities=16% Similarity=0.144 Sum_probs=74.8
Q ss_pred cEEEEcccHHHHHHHHHHHHCC--------Cc-EEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE
Q 011394 9 RIGLAGLAVMGQNLALNIAEKG--------FP-ISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 9 kIgiIGlG~mG~~lA~~L~~~G--------~~-V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
||||||+|.||...+..+.+.. .+ |.++|+++++++++.++... ...++|.+++++. ++.|+|++
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~-----~~~~~d~~~ll~~-~~iDaV~I 81 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGW-----STTETDWRTLLER-DDVQLVDV 81 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTC-----SEEESCHHHHTTC-TTCSEEEE
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCC-----CcccCCHHHHhcC-CCCCEEEE
Confidence 6999999999999888877542 24 44789999999988876531 2567899999875 45899999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEE-ec-CCCCchhHHHHHHH---HHHcCCeE
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCII-DG-GNEWYENTERREKA---MAELGLLY 129 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiI-d~-st~~~~~~~~~~~~---l~~~g~~~ 129 (487)
|+|+..+.+.++..+ ..|+-|+ .- -+....+.+++.+. ..+.|+.+
T Consensus 82 ~tP~~~H~~~~~~al----~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~ 132 (390)
T 4h3v_A 82 CTPGDSHAEIAIAAL----EAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRS 132 (390)
T ss_dssp CSCGGGHHHHHHHHH----HTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCE
T ss_pred eCChHHHHHHHHHHH----HcCCCceeecCcccchhHHHHHHHHHHHHHhcCCce
Confidence 999987666555443 4555444 31 12233556666333 44445433
No 264
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.78 E-value=0.00015 Score=71.94 Aligned_cols=101 Identities=13% Similarity=0.176 Sum_probs=67.6
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhc----CCCCccccCCHHHHHhhcCCCcEEEE
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKE----GDLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~----g~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
..+||+|||+|.||.++|..|+.+|+ +|.++|+++++++......... ....+..+.+.++ ++ ++|+||+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~-~~---~aDiVvi 93 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV-TA---NSKLVII 93 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG-GT---TEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH-hC---CCCEEEE
Confidence 45799999999999999999999997 8999999998776543322110 0001233455553 33 4999999
Q ss_pred ecCCCh---------------hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+...+. .++++.+.+..+ .|+.+++..||..
T Consensus 94 ~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPv 139 (331)
T 4aj2_A 94 TAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPV 139 (331)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred ccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChH
Confidence 874321 133344556565 5778888888743
No 265
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.76 E-value=0.00013 Score=71.27 Aligned_cols=105 Identities=10% Similarity=-0.007 Sum_probs=79.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCCh
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 403 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~ 403 (487)
.++++++|+++|.+.++.|+.++|++.+.++ +++|.++++++|+.|. .+|+.++........+...+.
T Consensus 167 ~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~------~Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~p~----- 234 (297)
T 4gbj_A 167 PGAANVIKLAGNFMIACSLEMMGEAFTMAEK------NGISRQSIYEMLTSTL-FAAPIFQNYGKLVASNTYEPV----- 234 (297)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------TTCCHHHHHHHHHTTT-TCSHHHHHHHHHHHHTCCCSC-----
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHhhc-ccCchhhccCccccCCCCCCc-----
Confidence 3789999999999999999999999999875 3499999999999884 588888875555444321110
Q ss_pred hHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011394 404 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 442 (487)
Q Consensus 404 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~ 442 (487)
-|.-. -....++-++..|.+.|+|+|....+..+|..
T Consensus 235 ~f~~~--l~~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~ 271 (297)
T 4gbj_A 235 AFRFP--LGLKDINLTLQTASDVNAPMPFADIIRNRFIS 271 (297)
T ss_dssp SSBHH--HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred cchhH--HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 11111 11235678889999999999999888876653
No 266
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.76 E-value=3.7e-05 Score=76.14 Aligned_cols=87 Identities=16% Similarity=0.391 Sum_probs=62.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
++||+|||+|+||+.++..|.+. +.++ .++|+++++ .+. . ++..++++++++. ++|+|++|+|+.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~-----~---gv~~~~d~~~ll~---~~DvViiatp~~ 69 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK-----T---PVFDVADVDKHAD---DVDVLFLCMGSA 69 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS-----S---CEEEGGGGGGTTT---TCSEEEECSCTT
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc-----C---CCceeCCHHHHhc---CCCEEEEcCCcH
Confidence 46899999999999999999887 4564 588998665 221 1 2455677777664 499999999987
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
...+.+. ..+..|..+++....
T Consensus 70 ~h~~~~~----~al~aG~~Vv~ekp~ 91 (320)
T 1f06_A 70 TDIPEQA----PKFAQFACTVDTYDN 91 (320)
T ss_dssp THHHHHH----HHHTTTSEEECCCCC
T ss_pred HHHHHHH----HHHHCCCEEEECCCC
Confidence 5544433 445568888876654
No 267
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.75 E-value=7e-05 Score=73.17 Aligned_cols=116 Identities=10% Similarity=0.073 Sum_probs=78.6
Q ss_pred CCCCCCCCcEEEEcccHHHHHHHHHHHH----CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCc
Q 011394 1 MVEGKQLTRIGLAGLAVMGQNLALNIAE----KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPR 75 (487)
Q Consensus 1 ~~~~~~~~kIgiIGlG~mG~~lA~~L~~----~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~ad 75 (487)
|....+++||||||+|.||...+..|.+ .+.++. ++|+++. .+.. ++. ..+++++++. .+.|
T Consensus 1 M~~~~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-----a~~~------g~~-~~~~~ell~~-~~vD 67 (294)
T 1lc0_A 1 MITNSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-----GSLD------EVR-QISLEDALRS-QEID 67 (294)
T ss_dssp CCCCCCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-----CEET------TEE-BCCHHHHHHC-SSEE
T ss_pred CCCCCCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH-----HHHc------CCC-CCCHHHHhcC-CCCC
Confidence 6555667899999999999999988865 355655 7788641 1111 233 4789999873 2389
Q ss_pred EEEEecCCChhHHHHHHHHhhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 76 VIIMLVKAGAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 76 vIi~~vp~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
+|++++|+..+.+.+.. .+..|+ ++++- -+..+.+.+++.+..+++|+.+..+.
T Consensus 68 ~V~i~tp~~~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~ 123 (294)
T 1lc0_A 68 VAYICSESSSHEDYIRQ----FLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEH 123 (294)
T ss_dssp EEEECSCGGGHHHHHHH----HHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEeCCcHhHHHHHHH----HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEE
Confidence 99999998766554443 344566 55553 34456677778887778887765554
No 268
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.71 E-value=0.00011 Score=72.58 Aligned_cols=115 Identities=12% Similarity=-0.006 Sum_probs=76.9
Q ss_pred CCCcEEEEcc-cHHHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--------hcCCCc
Q 011394 6 QLTRIGLAGL-AVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--------SIQKPR 75 (487)
Q Consensus 6 ~~~kIgiIGl-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~--------~l~~ad 75 (487)
.|+||||||+ |.||...+..|.+.+.++. ++|+++++. .+.+... ....+++.+++.+ .-++.|
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~-----~~~~~~~~~~ll~~~~~l~~~~~~~vD 75 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-IIDSISP-----QSEFFTEFEFFLDHASNLKRDSATALD 75 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCT-----TCEEESSHHHHHHHHHHHTTSTTTSCC
T ss_pred CceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCC-----CCcEECCHHHHHHhhhhhhhccCCCCc
Confidence 3689999999 7999999999999887654 789998762 2222111 3567889999873 113589
Q ss_pred EEEEecCCChhHHHHHHHHhhcccCCCEEEec--CCCCchhHHHHHHHHHHcCCeEE
Q 011394 76 VIIMLVKAGAPVDETIKTLSAYMEKGDCIIDG--GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 76 vIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~--st~~~~~~~~~~~~l~~~g~~~i 130 (487)
+|++++|+....+-+... +..|+-|+.- -+..+.+.+++.+..+++|..+.
T Consensus 76 ~V~I~tP~~~H~~~~~~a----l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 128 (318)
T 3oa2_A 76 YVSICSPNYLHYPHIAAG----LRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLY 128 (318)
T ss_dssp EEEECSCGGGHHHHHHHH----HHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred EEEECCCcHHHHHHHHHH----HHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEE
Confidence 999999987665544333 3345544432 13445667777777777776543
No 269
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.70 E-value=6.8e-05 Score=75.49 Aligned_cols=99 Identities=12% Similarity=0.166 Sum_probs=68.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc-ccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF-GFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~-~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.+|.|+|+|.+|..++..+...|.+|+++||++++.+.+.+.+... +. ...+.+++.+.+..+|+||.+++.+..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR----VELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG----SEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCce----eEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 5899999999999999999999999999999999998887665321 11 112233333323349999999865431
Q ss_pred -HHH-HHHHHhhcccCCCEEEecCCC
Q 011394 87 -VDE-TIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 -v~~-vl~~l~~~l~~g~iiId~st~ 110 (487)
... +.+...+.++++.+|+|.+..
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCCeecCHHHHhhCCCCCEEEEEecC
Confidence 000 012344567788888888753
No 270
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.69 E-value=5.2e-05 Score=77.01 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=63.9
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCC------------------------
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRD------------------------ 63 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s------------------------ 63 (487)
.+|+|||+|.+|...++.+...|.+|+++|+++++.+.+.+.+.. ....++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~-----~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGK-----FITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCE-----ECCC-----------------------CCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCe-----EEeecccccccccccccchhhcCHHHHhhh
Confidence 589999999999999999999999999999999887776553321 110001
Q ss_pred ---HHHHHhhcCCCcEEEEecCCC-hhHHHHH-HHHhhcccCCCEEEecCC
Q 011394 64 ---PESFVNSIQKPRVIIMLVKAG-APVDETI-KTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 64 ---~~e~~~~l~~advIi~~vp~~-~~v~~vl-~~l~~~l~~g~iiId~st 109 (487)
+++++. .+|+||.+++.+ .....++ ++....+++|.+|||.+.
T Consensus 248 ~~~l~~~~~---~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 248 AEAVLKELV---KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHHHHHT---TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHHHhC---CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 334444 499999888221 0011111 344566788899999873
No 271
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.68 E-value=0.00012 Score=72.23 Aligned_cols=115 Identities=17% Similarity=0.112 Sum_probs=77.4
Q ss_pred CCCcEEEEcc-cHHHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh-------hcCCCcE
Q 011394 6 QLTRIGLAGL-AVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN-------SIQKPRV 76 (487)
Q Consensus 6 ~~~kIgiIGl-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~-------~l~~adv 76 (487)
.|+||||||+ |.||...+..|.+.+.+|. ++|+++++. .+.+... ....+++.+++.+ +-.+.|+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~-----~~~~~~~~~~ll~~~~~l~~~~~~vD~ 75 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-LVDSFFP-----EAEFFTEPEAFEAYLEDLRDRGEGVDY 75 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCT-----TCEEESCHHHHHHHHHHHHHTTCCCSE
T ss_pred CceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCC-----CCceeCCHHHHHHHhhhhcccCCCCcE
Confidence 3679999999 7899999999999887654 789998863 2222111 3567889999872 1145899
Q ss_pred EEEecCCChhHHHHHHHHhhcccCCCEEEec--CCCCchhHHHHHHHHHHcCCeEE
Q 011394 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDG--GNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 77 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~--st~~~~~~~~~~~~l~~~g~~~i 130 (487)
|++|+|+....+-+... +..|+-|+.- -+....+.+++.+..+++|..+.
T Consensus 76 V~I~tP~~~H~~~~~~a----l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 127 (312)
T 3o9z_A 76 LSIASPNHLHYPQIRMA----LRLGANALSEKPLVLWPEEIARLKELEARTGRRVY 127 (312)
T ss_dssp EEECSCGGGHHHHHHHH----HHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEE
T ss_pred EEECCCchhhHHHHHHH----HHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 99999987654444333 3456655432 13344667777777777776553
No 272
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.67 E-value=0.00019 Score=70.74 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=62.2
Q ss_pred CcEEEEcc-cHHHHHHHHHHHHCC--CcEEEEeCChHHHHHHHHhhhhcCCCCccc---cCCHHHHHhhcCCCcEEEEec
Q 011394 8 TRIGLAGL-AVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKKEGDLPLFG---FRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 8 ~kIgiIGl-G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~---~~s~~e~~~~l~~advIi~~v 81 (487)
|||+|||+ |.+|.+++..|+..| .+|.++|+++.+. ...+........++.. +++++++.+. +|+||++.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~-~a~dL~~~~~~~~l~~~~~t~d~~~a~~~---aDvVvi~a 76 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-VAADLSHIETRATVKGYLGPEQLPDCLKG---CDVVVIPA 76 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-HHHHHTTSSSSCEEEEEESGGGHHHHHTT---CSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHH-HHHHHhccCcCceEEEecCCCCHHHHhCC---CCEEEECC
Confidence 58999998 999999999999988 6999999987221 1111111000001232 2456666665 99999997
Q ss_pred CCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 82 KAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 82 p~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..+. .++++.+.+.++. ++.+||..||.
T Consensus 77 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNP 119 (314)
T 1mld_A 77 GVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNP 119 (314)
T ss_dssp SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSC
T ss_pred CcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCC
Confidence 5431 2444445555554 55666667663
No 273
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.65 E-value=0.00013 Score=72.42 Aligned_cols=98 Identities=12% Similarity=0.089 Sum_probs=61.2
Q ss_pred CCCcEEEEc-ccHHHHHHHHHHHHCC--CcEEEEeCChHHH--HHHHHhhhhcCCCCccc---cCCHHHHHhhcCCCcEE
Q 011394 6 QLTRIGLAG-LAVMGQNLALNIAEKG--FPISVYNRTTSKV--DETVERAKKEGDLPLFG---FRDPESFVNSIQKPRVI 77 (487)
Q Consensus 6 ~~~kIgiIG-lG~mG~~lA~~L~~~G--~~V~v~dr~~~~~--~~l~~~~~~~g~~~~~~---~~s~~e~~~~l~~advI 77 (487)
++|||+||| +|.+|.+++..|+..| ++|.++|++++.. .++.+.... .++.. +++++++++. +|+|
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~---~~v~~~~~t~d~~~al~g---aDvV 80 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTG---AVVRGFLGQQQLEAALTG---MDLI 80 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSS---CEEEEEESHHHHHHHHTT---CSEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhccccc---ceEEEEeCCCCHHHHcCC---CCEE
Confidence 457999999 8999999999999999 7999999887621 112211100 01222 2244555554 9999
Q ss_pred EEecCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 78 IMLVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 78 i~~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
|++.+.+. .++++++.+...- +..+|+..||.
T Consensus 81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNP 127 (326)
T 1smk_A 81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNP 127 (326)
T ss_dssp EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSS
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCc
Confidence 99985431 2334445555543 55666666553
No 274
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.61 E-value=0.00013 Score=68.47 Aligned_cols=114 Identities=6% Similarity=0.001 Sum_probs=73.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHh-hcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVN-SIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~-~l~~advIi~~vp~~ 84 (487)
.++|.|+|+|.+|..++..|.+.|+ |+++|+++++++.+. .+... +.. .++.+.+.+ .++++|.||++++++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~----i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANF----VHGDPTRVSDLEKANVRGARAVIVDLESD 82 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEE----EESCTTCHHHHHHTTCTTCSEEEECCSCH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeE----EEcCCCCHHHHHhcCcchhcEEEEcCCCc
Confidence 3589999999999999999999999 999999999887766 32110 111 223333322 256799999999876
Q ss_pred hhHHHHHHHHhhcccCC-CEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 85 APVDETIKTLSAYMEKG-DCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
. ....+...+..+.++ .+|+..++.. .. +.+...|+..+-.|
T Consensus 83 ~-~n~~~~~~a~~~~~~~~iia~~~~~~--~~----~~l~~~G~~~vi~p 125 (234)
T 2aef_A 83 S-ETIHCILGIRKIDESVRIIAEAERYE--NI----EQLRMAGADQVISP 125 (234)
T ss_dssp H-HHHHHHHHHHHHCSSSEEEEECSSGG--GH----HHHHHHTCSEEECH
T ss_pred H-HHHHHHHHHHHHCCCCeEEEEECCHh--HH----HHHHHCCCCEEECH
Confidence 3 333333344445565 6777665542 22 23334577655444
No 275
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.60 E-value=0.0006 Score=69.97 Aligned_cols=115 Identities=18% Similarity=0.225 Sum_probs=74.0
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhh-hh------------------cCCCCccccCCHH
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERA-KK------------------EGDLPLFGFRDPE 65 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~-~~------------------~g~~~~~~~~s~~ 65 (487)
..||||||+|.||..++..+.+. +.+| .++|+++++.+++.++. .. .+ ....+++.+
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g--~~~v~~D~e 100 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAG--KIAVTDDND 100 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTT--CEEEESCHH
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccC--CceEECCHH
Confidence 35899999999999999888764 4554 47899999988876542 10 00 134678999
Q ss_pred HHHhhcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchh---HHHHHHHHHHcCCeE
Q 011394 66 SFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYEN---TERREKAMAELGLLY 129 (487)
Q Consensus 66 e~~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~---~~~~~~~l~~~g~~~ 129 (487)
++++. .+.|+|++++|++..-. +-....+..|+-|+.... +.+ ..++.+..++.|+.|
T Consensus 101 eLL~d-~dIDaVviaTp~p~~H~---e~a~~AL~AGKHVv~~nk--~l~~~eg~eL~~~A~e~Gvvl 161 (446)
T 3upl_A 101 LILSN-PLIDVIIDATGIPEVGA---ETGIAAIRNGKHLVMMNV--EADVTIGPYLKAQADKQGVIY 161 (446)
T ss_dssp HHHTC-TTCCEEEECSCCHHHHH---HHHHHHHHTTCEEEECCH--HHHHHHHHHHHHHHHHHTCCE
T ss_pred HHhcC-CCCCEEEEcCCChHHHH---HHHHHHHHcCCcEEecCc--ccCHHHHHHHHHHHHHhCCee
Confidence 99874 34899999998753212 223344567888875432 222 223344444556544
No 276
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.59 E-value=8.9e-05 Score=72.16 Aligned_cols=115 Identities=15% Similarity=0.099 Sum_probs=74.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCC----CccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDL----PLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~----~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
+++.|+|+|.||.++|..|++.| +|+++||++++.+++.+.....+.. .+.. .+.. +.+..+|+||.+++.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~---~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF-SGLD---VDLDGVDIIINATPI 203 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE-ECTT---CCCTTCCEEEECSCT
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEE-eeHH---HhhCCCCEEEECCCC
Confidence 57999999999999999999999 9999999999888876543210000 0111 1222 223459999999986
Q ss_pred ChhH--HHH-HHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011394 84 GAPV--DET-IKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 84 ~~~v--~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i 130 (487)
+..- +.. +. -...+.++.+++|++.. |..+ .+.+..+++|..++
T Consensus 204 ~~~~~~~~~~~~-~~~~l~~~~~v~Dv~y~-p~~t-~ll~~a~~~G~~~~ 250 (287)
T 1nvt_A 204 GMYPNIDVEPIV-KAEKLREDMVVMDLIYN-PLET-VLLKEAKKVNAKTI 250 (287)
T ss_dssp TCTTCCSSCCSS-CSTTCCSSSEEEECCCS-SSSC-HHHHHHHTTTCEEE
T ss_pred CCCCCCCCCCCC-CHHHcCCCCEEEEeeeC-CccC-HHHHHHHHCCCEEe
Confidence 5321 000 10 02356789999999874 4444 34455566676544
No 277
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.58 E-value=0.00014 Score=72.05 Aligned_cols=129 Identities=12% Similarity=0.100 Sum_probs=75.8
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHC-------CCcEE-EEeCChHH------HHHHHHhhhhcCCCCcc-ccCCHHHHHhh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEK-------GFPIS-VYNRTTSK------VDETVERAKKEGDLPLF-GFRDPESFVNS 70 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~-------G~~V~-v~dr~~~~------~~~l~~~~~~~g~~~~~-~~~s~~e~~~~ 70 (487)
++.+|+|||+|.||+.+++.|.+. +.+|. ++|++++. .+++.+.....+ .+. ...+..+++.+
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g--~~~~~~~d~~e~l~~ 80 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTG--RISDRAFSGPEDLMG 80 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHS--CSCSSBCCSGGGGTT
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcC--CCCcccCCHHHHhcC
Confidence 346899999999999999999874 33444 56877542 112221111000 011 01156666654
Q ss_pred cCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCc-hhHHHHHHHHHHcCCeEE-ecCCCCC
Q 011394 71 IQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWY-ENTERREKAMAELGLLYL-GMGVSGG 137 (487)
Q Consensus 71 l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~~l~~~g~~~i-~~pvsgg 137 (487)
.+.|+|+.|+|+....+...+.....+..|..||.++.... ....++.+..+++|..|. ++-+.+|
T Consensus 81 -~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~g 148 (325)
T 3ing_A 81 -EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGG 148 (325)
T ss_dssp -SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTT
T ss_pred -CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeeccc
Confidence 34899999999753334444445566778999987765321 223344555566777654 5555544
No 278
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.58 E-value=0.00013 Score=71.45 Aligned_cols=108 Identities=19% Similarity=0.051 Sum_probs=75.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcC--
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLV-- 401 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~-- 401 (487)
.++++.+|+++|.+.++.|++++|++.+.++. ++|..+++++|+.|. -+|+.++........ ..+...
T Consensus 166 ~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~------Gld~~~~~~vl~~~~-~~s~~~~~~~p~~~~---~~~~~~~~ 235 (300)
T 3obb_A 166 DGAGQVAKVCNNQLLAVLMIGTAEAMALGVAN------GLEAKVLAEIMRRSS-GGNWALEVYNPWPGV---MENAPASR 235 (300)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHTST-TCCHHHHHCCCSTTT---STTSGGGG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHhCc-ccchHHHhhccccch---hhhccccc
Confidence 37899999999999999999999999998863 499999999999874 467766532110000 000010
Q ss_pred --ChhHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhh
Q 011394 402 --DPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSY 443 (487)
Q Consensus 402 --~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~~ 443 (487)
++.|.-. -....++.++..|.+.|+|+|..+.+...|...
T Consensus 236 ~~~~~f~~~--l~~KDl~l~~~~A~~~g~~~p~~~~a~~~~~~a 277 (300)
T 3obb_A 236 DYSGGFMAQ--LMAKDLGLAQEAAQASASSTPMGSLALSLYRLL 277 (300)
T ss_dssp TTCSSSBHH--HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred cCCccchHH--HHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 1122211 123456888899999999999999998766543
No 279
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.57 E-value=0.00035 Score=71.87 Aligned_cols=118 Identities=16% Similarity=0.249 Sum_probs=75.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHC----------CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcE
Q 011394 8 TRIGLAGLAVMGQNLALNIAEK----------GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRV 76 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~----------G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~adv 76 (487)
.+|||||+|.||..++..|.++ +.+|. ++|+++++.+.+.. ....+++++++++. .+.|+
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~--------~~~~~~d~~ell~d-~diDv 81 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG--------GLPLTTNPFDVVDD-PEIDI 81 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT--------TCCEESCTHHHHTC-TTCCE
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc--------cCcccCCHHHHhcC-CCCCE
Confidence 4799999999999999877642 34444 77999988766531 13567899999874 34799
Q ss_pred EEEecCCChhHHHHHHHHhhcccCCCEEEecCCCC-chhHHHHHHHHHHcCCeEE-ecCCCCC
Q 011394 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW-YENTERREKAMAELGLLYL-GMGVSGG 137 (487)
Q Consensus 77 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~g~~~i-~~pvsgg 137 (487)
|++++|......+.+ ...+..|+.|+...... .....++.+..+++|+.+. .+-+.++
T Consensus 82 Vve~tp~~~~h~~~~---~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~g 141 (444)
T 3mtj_A 82 VVELIGGLEPARELV---MQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGG 141 (444)
T ss_dssp EEECCCSSTTHHHHH---HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTT
T ss_pred EEEcCCCchHHHHHH---HHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCC
Confidence 999998632333332 34456788887544310 1122344555566787763 5555443
No 280
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.56 E-value=0.00012 Score=72.81 Aligned_cols=115 Identities=7% Similarity=0.046 Sum_probs=73.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEE-EEeCCh-HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTT-SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~-~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
|+||||||+|.+|...+..| ..+.+|. ++|+++ ++.+.+.+..... +.+...+++.+++++. .+.|+|++++|+.
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~-~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEM-NIKPKKYNNWWEMLEK-EKPDILVINTVFS 78 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTT-TCCCEECSSHHHHHHH-HCCSEEEECSSHH
T ss_pred ceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHc-CCCCcccCCHHHHhcC-CCCCEEEEeCCcc
Confidence 46999999999998888777 6677766 689987 4554444332111 0113578899999874 3489999999987
Q ss_pred hhHHHHHHHHhhcccCCCEEEec--CCCCchhHHHHHHHHHHcCCe
Q 011394 85 APVDETIKTLSAYMEKGDCIIDG--GNEWYENTERREKAMAELGLL 128 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~--st~~~~~~~~~~~~l~~~g~~ 128 (487)
...+.+.. .+..|+-|+.- -+....+.+++.+..++.|..
T Consensus 79 ~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 79 LNGKILLE----ALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp HHHHHHHH----HHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred hHHHHHHH----HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 55443333 34456544432 123345666677766666654
No 281
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.55 E-value=0.00016 Score=70.44 Aligned_cols=111 Identities=16% Similarity=0.077 Sum_probs=76.0
Q ss_pred CCCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecC
Q 011394 6 QLTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~--~l~~advIi~~vp 82 (487)
+.+||+|+|+ |.||..+++++.+.|++ .++..+|.+.. +.. . ++.++.+++|+.+ . +|++++++|
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~-~v~~VnP~~~g---~~i--~---G~~vy~sl~el~~~~~---~Dv~Ii~vp 73 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTK-IVAGVTPGKGG---MEV--L---GVPVYDTVKEAVAHHE---VDASIIFVP 73 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT---CEE--T---TEEEESSHHHHHHHSC---CSEEEECCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCe-EEEEECCCCCC---ceE--C---CEEeeCCHHHHhhcCC---CCEEEEecC
Confidence 3468999998 99999999999999998 44555544310 000 1 3677889999987 5 999999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCch-hHHHHHHHHHHcCCeEEe
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAELGLLYLG 131 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~i~ 131 (487)
+. .+.++++++...- - ..+|..+++.+. +.+++.+.+++.|+.+++
T Consensus 74 ~~-~~~~~~~ea~~~G-i-~~vVi~t~G~~~~~~~~l~~~a~~~gi~vig 120 (288)
T 1oi7_A 74 AP-AAADAALEAAHAG-I-PLIVLITEGIPTLDMVRAVEEIKALGSRLIG 120 (288)
T ss_dssp HH-HHHHHHHHHHHTT-C-SEEEECCSCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HH-HHHHHHHHHHHCC-C-CEEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 75 5666666655421 1 334445666554 344566667778887764
No 282
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.54 E-value=0.00024 Score=68.76 Aligned_cols=109 Identities=17% Similarity=0.046 Sum_probs=74.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++.|+|+|-+|++++..|.+.|. +|+++||++++.+++.+.. . ..+.+++.+ + .+|+||-++|.+..
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~--------~-~~~~~~l~~-l-~~DivInaTp~Gm~ 191 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF--------K-VISYDELSN-L-KGDVIINCTPKGMY 191 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS--------E-EEEHHHHTT-C-CCSEEEECSSTTST
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc--------C-cccHHHHHh-c-cCCEEEECCccCcc
Confidence 579999999999999999999998 9999999999988876532 1 123334333 3 49999999987521
Q ss_pred --HHH-HHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 87 --VDE-TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 87 --v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
.+. .+ -...+.++.+|+|..-. |..| .+.+..+++|...++
T Consensus 192 ~~~~~~pi--~~~~l~~~~~v~DlvY~-P~~T-~ll~~A~~~G~~~~~ 235 (282)
T 3fbt_A 192 PKEGESPV--DKEVVAKFSSAVDLIYN-PVET-LFLKYARESGVKAVN 235 (282)
T ss_dssp TSTTCCSS--CHHHHTTCSEEEESCCS-SSSC-HHHHHHHHTTCEEEC
T ss_pred CCCccCCC--CHHHcCCCCEEEEEeeC-CCCC-HHHHHHHHCcCeEeC
Confidence 000 01 01235688999998754 3333 345556677876553
No 283
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.54 E-value=0.00028 Score=70.08 Aligned_cols=107 Identities=8% Similarity=0.119 Sum_probs=73.5
Q ss_pred CcEEEEcccHHHH-HHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 8 TRIGLAGLAVMGQ-NLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 8 ~kIgiIGlG~mG~-~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
+||||||+|.||. ..+..|.+. +.+|. ++|+++++. ++..+++.+++++...+.|+|++++|+.
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~~-------------g~~~~~~~~~ll~~~~~vD~V~i~tp~~ 92 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTVE-------------GVNSYTTIEAMLDAEPSIDAVSLCMPPQ 92 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCCT-------------TSEEESSHHHHHHHCTTCCEEEECSCHH
T ss_pred ceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhhc-------------CCCccCCHHHHHhCCCCCCEEEEeCCcH
Confidence 5899999999998 788888876 56654 789986531 2567889999987534689999999976
Q ss_pred hhHHHHHHHHhhcccCCCEEEecC--CCCchhHHHHHHHHHHcCCeEEe
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGG--NEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
...+-+. ..+..|+-|+.-- +....+.+++.+..++.|+.+..
T Consensus 93 ~H~~~~~----~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 137 (330)
T 4ew6_A 93 YRYEAAY----KALVAGKHVFLEKPPGATLSEVADLEALANKQGASLFA 137 (330)
T ss_dssp HHHHHHH----HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHH----HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEE
Confidence 5433332 3344666555322 23445666677777777765543
No 284
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.53 E-value=0.0002 Score=74.08 Aligned_cols=90 Identities=11% Similarity=0.040 Sum_probs=69.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++++|+|+|.+|..+|+.|+..|.+|+++|+++.+..+....+. ...+.+++... +|+++.+......+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~--------dv~~lee~~~~---aDvVi~atG~~~vl 334 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGL--------QVLTLEDVVSE---ADIFVTTTGNKDII 334 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC--------EECCGGGTTTT---CSEEEECSSCSCSB
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCC--------ccCCHHHHHHh---cCEEEeCCCChhhh
Confidence 47999999999999999999999999999999988776665431 24467777665 99999887644322
Q ss_pred HHHHHHHhhcccCCCEEEecCCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
. ......++++.+|++.+...
T Consensus 335 ~---~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 335 M---LDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp C---HHHHTTSCTTEEEEESSSTT
T ss_pred h---HHHHHhcCCCeEEEEcCCCC
Confidence 2 23456688999999998753
No 285
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.51 E-value=0.0003 Score=69.21 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=76.4
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCC---hHHHHHHHHhhhhcCCCCcc--ccCCHHHHHhhcCCCcEEEEec
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT---TSKVDETVERAKKEGDLPLF--GFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~---~~~~~~l~~~~~~~g~~~~~--~~~s~~e~~~~l~~advIi~~v 81 (487)
+++.|+|+|-+|++++..|++.|. +|+++||+ .++++++.++.....+..+. ..++.+++.+.+..+|+||-++
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECc
Confidence 479999999999999999999998 89999999 88888887653321000011 1233333322222399999999
Q ss_pred CCChhHH--H-HHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011394 82 KAGAPVD--E-TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 82 p~~~~v~--~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i 130 (487)
|.+-.-. . .+. ....++++.+|+|..-. |..| .+.+..+++|...+
T Consensus 235 p~Gm~~~~~~~p~~-~~~~l~~~~~V~DlvY~-P~~T-~ll~~A~~~G~~~~ 283 (315)
T 3tnl_A 235 GVGMKPFEGETLLP-SADMLRPELIVSDVVYK-PTKT-RLLEIAEEQGCQTL 283 (315)
T ss_dssp STTSTTSTTCCSCC-CGGGCCTTCEEEESCCS-SSSC-HHHHHHHHTTCEEE
T ss_pred cCCCCCCCCCCCCC-cHHHcCCCCEEEEeccC-CCCC-HHHHHHHHCCCeEe
Confidence 8652100 0 010 12346788999998754 3344 34455567776554
No 286
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.48 E-value=0.00067 Score=66.05 Aligned_cols=99 Identities=11% Similarity=0.093 Sum_probs=63.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhh----cC-CCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKK----EG-DLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~----~g-~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
|||+|||+|.+|.++|..|..++. ++.+||.++++++-.+..... .. ..++....+.++ ++++|+||++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~----~~~aDvVvit 76 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL----LKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGG----GTTCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHH----hCCCCEEEEe
Confidence 799999999999999999988875 899999998765432221110 00 002233445544 3349999998
Q ss_pred cCCC----hh-----------HHHHHHHHhhcccCCCEEEecCCCC
Q 011394 81 VKAG----AP-----------VDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 81 vp~~----~~-----------v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
.-.+ .. ++++.+++.++ .++.+++..||..
T Consensus 77 AG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvsNPv 121 (294)
T 2x0j_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNPM 121 (294)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSH
T ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEecCcc
Confidence 6322 11 23344555555 3667788887753
No 287
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.46 E-value=0.00015 Score=69.83 Aligned_cols=95 Identities=16% Similarity=0.128 Sum_probs=64.6
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHC-CCcEEE-EeCChHHH-----HHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEK-GFPISV-YNRTTSKV-----DETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII 78 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~-G~~V~v-~dr~~~~~-----~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi 78 (487)
|+||+|+| +|.||+.+++.+.+. ++++.. +|++++.. .++.. .. .++..+++++++.+. +|+||
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g--~~---~gv~v~~dl~~ll~~---~DVVI 78 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLG--KQ---TGVALTDDIERVCAE---ADYLI 78 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTT--CC---CSCBCBCCHHHHHHH---CSEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhC--CC---CCceecCCHHHHhcC---CCEEE
Confidence 67999999 899999999998865 567664 69875421 11110 00 035667899998887 99999
Q ss_pred EecCCChhHHHHHHHHhhcccCCCEEEecCCCCch
Q 011394 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYE 113 (487)
Q Consensus 79 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~ 113 (487)
-+.++. .+.+.+... +..|.-+|..+|+...
T Consensus 79 DfT~p~-a~~~~~~~a---l~~G~~vVigTTG~s~ 109 (272)
T 4f3y_A 79 DFTLPE-GTLVHLDAA---LRHDVKLVIGTTGFSE 109 (272)
T ss_dssp ECSCHH-HHHHHHHHH---HHHTCEEEECCCCCCH
T ss_pred EcCCHH-HHHHHHHHH---HHcCCCEEEECCCCCH
Confidence 988653 444444433 4567777777877644
No 288
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.45 E-value=0.00029 Score=68.75 Aligned_cols=110 Identities=15% Similarity=0.076 Sum_probs=76.4
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCC
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~--~l~~advIi~~vp~ 83 (487)
..+|.|+|+ |.||..+++++.+.|++ .++..+|.+..+ .. . ++..+.|++|+.+ . +|++++++|+
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g~---~i--~---G~~vy~sl~el~~~~~---~Dv~ii~vp~ 80 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGGQ---NV--H---GVPVFDTVKEAVKETD---ANASVIFVPA 80 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTTC---EE--T---TEEEESSHHHHHHHHC---CCEEEECCCH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCCc---eE--C---CEeeeCCHHHHhhcCC---CCEEEEccCH
Confidence 357889998 99999999999999998 666666653210 00 1 3678889999987 5 9999999997
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCch-hHHHHHHHHHHcCCeEEe
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAELGLLYLG 131 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~i~ 131 (487)
. .+.++++++... .=+.+|..+++.+. +..++.+.+++.|+.+++
T Consensus 81 ~-~~~~~v~ea~~~--Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viG 126 (294)
T 2yv1_A 81 P-FAKDAVFEAIDA--GIELIVVITEHIPVHDTMEFVNYAEDVGVKIIG 126 (294)
T ss_dssp H-HHHHHHHHHHHT--TCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred H-HHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 5 566666655542 11334445655544 345566677778887764
No 289
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.44 E-value=0.00065 Score=67.78 Aligned_cols=108 Identities=16% Similarity=0.188 Sum_probs=72.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++|+|+|+|++|..+|+.|.+.|.+|+++|+++++ .++.+.. +.+.. +.+++... .||+++-|-... .+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~------ga~~v-~~~ell~~--~~DIliP~A~~~-~I 244 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVAL------GHTAV-ALEDVLST--PCDVFAPCAMGG-VI 244 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHT------TCEEC-CGGGGGGC--CCSEEEECSCSC-CB
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhc------CCEEe-ChHHhhcC--ccceecHhHHHh-hc
Confidence 58999999999999999999999999999999876 3333322 12222 55666551 389998653222 22
Q ss_pred HHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
. .+-++.+ +.++|++.+|...... +..+.+.++|+.++.
T Consensus 245 ~---~~~~~~l-k~~iVie~AN~p~t~~-eA~~~L~~~gIlv~P 283 (355)
T 1c1d_A 245 T---TEVARTL-DCSVVAGAANNVIADE-AASDILHARGILYAP 283 (355)
T ss_dssp C---HHHHHHC-CCSEECCSCTTCBCSH-HHHHHHHHTTCEECC
T ss_pred C---HHHHhhC-CCCEEEECCCCCCCCH-HHHHHHHhCCEEEEC
Confidence 1 1222334 4689999998764332 335778888876653
No 290
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.41 E-value=0.00017 Score=75.05 Aligned_cols=87 Identities=11% Similarity=0.218 Sum_probs=59.0
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKA 83 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~--~l~~advIi~~vp~ 83 (487)
..|||-|+|+|.+|..+|+.|.+.||+|++.|+++++++++.+..... -+....+-.++.. .+++||+++.++.+
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~---~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLR---VVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCE---EEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcE---EEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 458999999999999999999999999999999999999887653210 0222222222222 24569988776665
Q ss_pred ChhHHHHHHHHhh
Q 011394 84 GAPVDETIKTLSA 96 (487)
Q Consensus 84 ~~~v~~vl~~l~~ 96 (487)
+ .+.-+.-.++.
T Consensus 79 D-e~Nl~~~~~Ak 90 (461)
T 4g65_A 79 D-ETNMAACQVAF 90 (461)
T ss_dssp H-HHHHHHHHHHH
T ss_pred h-HHHHHHHHHHH
Confidence 4 33333333333
No 291
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.41 E-value=0.00022 Score=70.86 Aligned_cols=125 Identities=16% Similarity=0.122 Sum_probs=73.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHC------C--CcE-EEEeCChHHHHH------HHHhhhhcCCCCcc-ccC---CHHHHH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEK------G--FPI-SVYNRTTSKVDE------TVERAKKEGDLPLF-GFR---DPESFV 68 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~------G--~~V-~v~dr~~~~~~~------l~~~~~~~g~~~~~-~~~---s~~e~~ 68 (487)
+||||||+|.||..++..|.+. | .+| .++|+++++.++ +.+..... .+. .++ ++++++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~ll 83 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKG---SLDSLEYESISASEAL 83 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTT---CGGGCCSEECCHHHHH
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccC---CcccccCCCCCHHHHh
Confidence 5899999999999999998764 2 455 477988765433 22211100 121 344 899988
Q ss_pred hhcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCC-chhHHHHHHHHHHcCCeEE-ecCCCCC
Q 011394 69 NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW-YENTERREKAMAELGLLYL-GMGVSGG 137 (487)
Q Consensus 69 ~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~g~~~i-~~pvsgg 137 (487)
. .+.|+|+.|+|+....+...+-....+..|+.|+.++... .....++.+..+++|+.|. ++.+.+|
T Consensus 84 -~-~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea~vg~g 152 (331)
T 3c8m_A 84 -A-RDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEATVAGG 152 (331)
T ss_dssp -H-SSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTT
T ss_pred -C-CCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 4 3589999999984001112223344567888888654311 1223344555566676553 4444433
No 292
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.37 E-value=0.00052 Score=68.25 Aligned_cols=94 Identities=10% Similarity=0.135 Sum_probs=62.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC-CcEE-EEeCChHHHHHHHHhhh-h-cCCC----------CccccCCHHHHHhhcC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG-FPIS-VYNRTTSKVDETVERAK-K-EGDL----------PLFGFRDPESFVNSIQ 72 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G-~~V~-v~dr~~~~~~~l~~~~~-~-~g~~----------~~~~~~s~~e~~~~l~ 72 (487)
|+||||||+|.||..+++.|.+.. .+|. ++|+++++...+.+... . .+.+ .+....+++++...
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~-- 79 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK-- 79 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT--
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccC--
Confidence 359999999999999999998764 4554 67888887776665321 0 0000 12345678888765
Q ss_pred CCcEEEEecCCChhHHHHHHHHhhcccCCCEEEec
Q 011394 73 KPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDG 107 (487)
Q Consensus 73 ~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~ 107 (487)
+|+|++|+|.....+.. . .++..|+.||..
T Consensus 80 -vDvV~~aTp~~~h~~~a-~---~~l~aGk~Vi~s 109 (334)
T 2czc_A 80 -VDIIVDATPGGIGAKNK-P---LYEKAGVKAIFQ 109 (334)
T ss_dssp -CSEEEECCSTTHHHHHH-H---HHHHHTCEEEEC
T ss_pred -CCEEEECCCccccHHHH-H---HHHHcCCceEee
Confidence 99999999987443333 2 334456777743
No 293
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.34 E-value=0.0012 Score=65.42 Aligned_cols=101 Identities=13% Similarity=0.164 Sum_probs=64.1
Q ss_pred CCCcEEEEcc-cHHHHHHHHHHHHCCC-------cEEEEeCC----hHHHHHHHHhhhhcC-CC--CccccCCHHHHHhh
Q 011394 6 QLTRIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRT----TSKVDETVERAKKEG-DL--PLFGFRDPESFVNS 70 (487)
Q Consensus 6 ~~~kIgiIGl-G~mG~~lA~~L~~~G~-------~V~v~dr~----~~~~~~l~~~~~~~g-~~--~~~~~~s~~e~~~~ 70 (487)
+.|||+|||+ |.+|.+++..|+..|+ +|.++|++ +++++.......... .+ ++...++..+.++.
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKD 83 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCC
Confidence 3469999997 9999999999999886 89999999 655543221111100 00 23344566666665
Q ss_pred cCCCcEEEEecCCCh----h-----------HHHHHHHHhhcccCCCEEEecCC
Q 011394 71 IQKPRVIIMLVKAGA----P-----------VDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 71 l~~advIi~~vp~~~----~-----------v~~vl~~l~~~l~~g~iiId~st 109 (487)
+|+||++...+. . ++++++.+..+..+..++|..||
T Consensus 84 ---aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 84 ---ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp ---CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred ---CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 999999864321 1 22333445444335668888876
No 294
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.32 E-value=0.00035 Score=67.15 Aligned_cols=70 Identities=10% Similarity=0.081 Sum_probs=51.3
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
+||+|.|+|+|.+|+.++..|.++|++|++.+|++++.+.+...+.. . ...++.++ + ++++|+||.+...
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~-~~~D~~d~-~-~~~~d~vi~~a~~ 73 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAE-----P-LLWPGEEP-S-LDGVTHLLISTAP 73 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEE-----E-EESSSSCC-C-CTTCCEEEECCCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCe-----E-EEeccccc-c-cCCCCEEEECCCc
Confidence 46799999999999999999999999999999999888776543321 1 11122221 1 4459999988754
No 295
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.32 E-value=0.00023 Score=67.45 Aligned_cols=109 Identities=14% Similarity=0.054 Sum_probs=73.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.|+|+++|+|+||+.+++. . ++++. +|+ ++..++ ++..+++++++.+. +|+|+.|.+..
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k~gel----------gv~a~~d~d~lla~---pD~VVe~A~~~- 71 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RISKDI----------PGVVRLDEFQVPSD---VSTVVECASPE- 71 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SSCCCC----------SSSEECSSCCCCTT---CCEEEECSCHH-
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cccccc----------CceeeCCHHHHhhC---CCEEEECCCHH-
Confidence 4799999999999999998 4 88774 667 333222 14567888888755 99999998543
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCC---chhHHHHHHHHHHcCCeE-EecCCCCCh
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEW---YENTERREKAMAELGLLY-LGMGVSGGE 138 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~---~~~~~~~~~~l~~~g~~~-i~~pvsgg~ 138 (487)
++++. +.+.|..|.-++-+|.+. +...+++.+.+++.|..+ +..+..+|.
T Consensus 72 av~e~---~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGAi~Gl 125 (253)
T 1j5p_A 72 AVKEY---SLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIGGL 125 (253)
T ss_dssp HHHHH---HHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCCCH
T ss_pred HHHHH---HHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCcccch
Confidence 44443 455677898888888763 222234444455556554 456777663
No 296
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.31 E-value=3.8e-05 Score=75.46 Aligned_cols=90 Identities=14% Similarity=0.094 Sum_probs=62.6
Q ss_pred CcEEEEcccHH-HHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc-c-----c--CCHHHHHhhcCCCcEEE
Q 011394 8 TRIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF-G-----F--RDPESFVNSIQKPRVII 78 (487)
Q Consensus 8 ~kIgiIGlG~m-G~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~-~-----~--~s~~e~~~~l~~advIi 78 (487)
.++.|||.|.| |.++|+.|...|.+|+++||+..+..+..+.... ... . + .++++.+.. +|+||
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~----~~~~~t~~~~t~~~~L~e~l~~---ADIVI 250 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKL----NKHHVEDLGEYSEDLLKKCSLD---SDVVI 250 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSC----CCCEEEEEEECCHHHHHHHHHH---CSEEE
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhh----hcccccccccccHhHHHHHhcc---CCEEE
Confidence 58999999976 9999999999999999999984432111111100 011 1 1 456677776 99999
Q ss_pred EecCCChh-HHHHHHHHhhcccCCCEEEecCCC
Q 011394 79 MLVKAGAP-VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 79 ~~vp~~~~-v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.+++.+.. +. ...+++|.+|||.+..
T Consensus 251 sAtg~p~~vI~------~e~vk~GavVIDVgi~ 277 (320)
T 1edz_A 251 TGVPSENYKFP------TEYIKEGAVCINFACT 277 (320)
T ss_dssp ECCCCTTCCBC------TTTSCTTEEEEECSSS
T ss_pred ECCCCCcceeC------HHHcCCCeEEEEcCCC
Confidence 99987642 21 1346789999999864
No 297
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.30 E-value=0.00052 Score=67.55 Aligned_cols=94 Identities=13% Similarity=0.174 Sum_probs=62.3
Q ss_pred CCcEEEEcccHHHHHHHHHHHH-C-CCcE-EEEeCChHH-HHHHHHhhhhcCCCCcc-ccCCHHHHHhh--cCCCcEEEE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAE-K-GFPI-SVYNRTTSK-VDETVERAKKEGDLPLF-GFRDPESFVNS--IQKPRVIIM 79 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~-~-G~~V-~v~dr~~~~-~~~l~~~~~~~g~~~~~-~~~s~~e~~~~--l~~advIi~ 79 (487)
++||||||+|.||..++..|.+ . +.++ .++|+++++ ..++.+... +. ..++.+++.+. ..+.|+|++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g------~~~~~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMG------VTTTYAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTT------CCEESSHHHHHHHSGGGGGEEEEEE
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcC------CCcccCCHHHHHhccCCCCCcEEEE
Confidence 4689999999999999999966 3 4444 478999887 555554331 22 24566777542 234899999
Q ss_pred ecCCChhHHHHHHHHhhcccC--CCEEEecCCC
Q 011394 80 LVKAGAPVDETIKTLSAYMEK--GDCIIDGGNE 110 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~--g~iiId~st~ 110 (487)
++|..... +..... +.. |..|++.+..
T Consensus 78 atp~~~h~-~~a~~a---l~a~~Gk~Vi~ekp~ 106 (312)
T 1nvm_B 78 ATSASAHV-QNEALL---RQAKPGIRLIDLTPA 106 (312)
T ss_dssp CSCHHHHH-HHHHHH---HHHCTTCEEEECSTT
T ss_pred CCChHHHH-HHHHHH---HHhCCCCEEEEcCcc
Confidence 99965332 232222 334 8888887754
No 298
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.28 E-value=0.00049 Score=65.81 Aligned_cols=73 Identities=16% Similarity=0.366 Sum_probs=59.0
Q ss_pred CcEEEEcccH-HHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++.|||.|. +|.++|..|...|.+|+++++. +.++++.+++ +|+||.+++.+..
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~---------------------t~~L~~~~~~---ADIVI~Avg~p~~ 206 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK---------------------TKDIGSMTRS---SKIVVVAVGRPGF 206 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------------------CSCHHHHHHH---SSEEEECSSCTTC
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC---------------------cccHHHhhcc---CCEEEECCCCCcc
Confidence 4799999985 8999999999999999999864 2356677777 9999999987643
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+. ...+++|.+|||.+..
T Consensus 207 I~------~~~vk~GavVIDvgi~ 224 (276)
T 3ngx_A 207 LN------REMVTPGSVVIDVGIN 224 (276)
T ss_dssp BC------GGGCCTTCEEEECCCE
T ss_pred cc------HhhccCCcEEEEeccC
Confidence 22 2457899999999865
No 299
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.28 E-value=8e-05 Score=69.21 Aligned_cols=79 Identities=23% Similarity=0.348 Sum_probs=51.1
Q ss_pred CCcEEEEcccHHHHHHHHH--HHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQNLALN--IAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~--L~~~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
.++|+|||+|.+|..+++. +...|+++. ++|.++++....... .++...++++++++. .|++++|+|+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~g------v~V~~~~dl~eli~~---~D~ViIAvPs 155 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGG------VPVYNLDDLEQHVKD---ESVAILTVPA 155 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETT------EEEEEGGGHHHHCSS---CCEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcC------CeeechhhHHHHHHh---CCEEEEecCc
Confidence 3689999999999999994 445678766 669999876442211 123345677777765 4999999997
Q ss_pred ChhHHHHHHHHh
Q 011394 84 GAPVDETIKTLS 95 (487)
Q Consensus 84 ~~~v~~vl~~l~ 95 (487)
. ...++.+.+.
T Consensus 156 ~-~~~ei~~~l~ 166 (215)
T 2vt3_A 156 V-AAQSITDRLV 166 (215)
T ss_dssp H-HHHHHHHHHH
T ss_pred h-hHHHHHHHHH
Confidence 5 3445555544
No 300
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.27 E-value=0.0013 Score=65.10 Aligned_cols=114 Identities=15% Similarity=0.101 Sum_probs=69.8
Q ss_pred CCCcEEEEcccHHHHH-HHHHHHHCCCcEEEEeCCh--HHHHHHHHhhhhcCCCCccccCCHHHHH-hhcCCCcEEEEe-
Q 011394 6 QLTRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTT--SKVDETVERAKKEGDLPLFGFRDPESFV-NSIQKPRVIIML- 80 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~--~~~~~l~~~~~~~g~~~~~~~~s~~e~~-~~l~~advIi~~- 80 (487)
.|++|.|||+|.+|.+ +|+.|.+.|++|+++|+++ ...+++.+.+.. +..-.+++++. .. +|+||.+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~-----v~~g~~~~~l~~~~---~d~vV~Sp 74 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGID-----VYEGFDAAQLDEFK---ADVYVIGN 74 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCE-----EEESCCGGGGGSCC---CSEEEECT
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCE-----EECCCCHHHcCCCC---CCEEEECC
Confidence 3678999999999995 9999999999999999864 345556554321 22223444443 23 8999986
Q ss_pred -cCCCh-hHHHHHH---------HH-hhcccCC-C-EEEecCCCCchhHHHHHHHHHHcCC
Q 011394 81 -VKAGA-PVDETIK---------TL-SAYMEKG-D-CIIDGGNEWYENTERREKAMAELGL 127 (487)
Q Consensus 81 -vp~~~-~v~~vl~---------~l-~~~l~~g-~-iiId~st~~~~~~~~~~~~l~~~g~ 127 (487)
+|.+. .+....+ ++ ...+.++ . +-|-.|++...++.-+...++..|.
T Consensus 75 gi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~ 135 (326)
T 3eag_A 75 VAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGL 135 (326)
T ss_dssp TCCTTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred CcCCCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 44432 2222221 22 2222222 3 5555666665555555677777664
No 301
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.26 E-value=0.0017 Score=63.53 Aligned_cols=99 Identities=10% Similarity=0.088 Sum_probs=60.1
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCC--cEEEEeC--ChHHHHHHHHhhhhc--CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGF--PISVYNR--TTSKVDETVERAKKE--GDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~--~V~v~dr--~~~~~~~l~~~~~~~--g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
|||+|+| +|.+|.+++..|+..|+ ++.++|+ ++++++......... -..+++...+..+..+ ++|+||++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~---~aDvVi~~ 77 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTA---GSDVVVIT 77 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGT---TCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhC---CCCEEEEc
Confidence 6899999 99999999999998886 6899999 877654322211110 0001222222233344 49999998
Q ss_pred cCCCh---------------hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
...+. .++++++.+..+ .+..+|+..||.
T Consensus 78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNP 121 (303)
T 1o6z_A 78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNP 121 (303)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCCh
Confidence 75331 123333445444 456677766553
No 302
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.22 E-value=0.0013 Score=64.68 Aligned_cols=118 Identities=15% Similarity=0.146 Sum_probs=76.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCC---hHHHHHHHHhhhhcCCCCccc--cCCH---HHHHhhcCCCcEEE
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT---TSKVDETVERAKKEGDLPLFG--FRDP---ESFVNSIQKPRVII 78 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~---~~~~~~l~~~~~~~g~~~~~~--~~s~---~e~~~~l~~advIi 78 (487)
+++.|+|+|-+|++++..|++.|. +|+++||+ .++++++.++.....+..+.. ..+. .+.+.. +|+||
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~---~DiII 225 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS---ADILT 225 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH---CSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC---ceEEE
Confidence 579999999999999999999998 89999999 888888776533210000111 2233 344555 99999
Q ss_pred EecCCChhHHHHHHHH---hhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 79 MLVKAGAPVDETIKTL---SAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 79 ~~vp~~~~v~~vl~~l---~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
-++|.+..-..- ..+ ...+.++.+|+|.--. |..| .+.+..+++|...++
T Consensus 226 NaTp~Gm~~~~~-~~~~~~~~~l~~~~~v~D~vY~-P~~T-~ll~~A~~~G~~~~~ 278 (312)
T 3t4e_A 226 NGTKVGMKPLEN-ESLIGDVSLLRPELLVTECVYN-PHMT-KLLQQAQQAGCKTID 278 (312)
T ss_dssp ECSSTTSTTSTT-CCSCCCGGGSCTTCEEEECCCS-SSSC-HHHHHHHHTTCEEEC
T ss_pred ECCcCCCCCCCC-CcccCCHHHcCCCCEEEEeccC-CCCC-HHHHHHHHCCCeEEC
Confidence 999976310000 001 1346788999998754 3334 344555677766553
No 303
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.21 E-value=0.00088 Score=61.87 Aligned_cols=72 Identities=14% Similarity=0.306 Sum_probs=49.7
Q ss_pred CCc-EEEEc-ccHHHHHHHHHHH-HCCCcEEEEeCChH-HHHHHHHhhhhcCCCCccc----cCCHHHHHhhcCCCcEEE
Q 011394 7 LTR-IGLAG-LAVMGQNLALNIA-EKGFPISVYNRTTS-KVDETVERAKKEGDLPLFG----FRDPESFVNSIQKPRVII 78 (487)
Q Consensus 7 ~~k-IgiIG-lG~mG~~lA~~L~-~~G~~V~v~dr~~~-~~~~l~~~~~~~g~~~~~~----~~s~~e~~~~l~~advIi 78 (487)
||| |.|+| .|.+|..+++.|+ +.|++|++.+|+++ +.+++..... ++.. ..+.+++.+.++.+|+||
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHE-----RVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTST-----TEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCC-----ceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 456 99999 6999999999999 89999999999998 7766542221 1111 123333333334478888
Q ss_pred EecCC
Q 011394 79 MLVKA 83 (487)
Q Consensus 79 ~~vp~ 83 (487)
.+...
T Consensus 79 ~~ag~ 83 (221)
T 3r6d_A 79 VGAME 83 (221)
T ss_dssp ESCCC
T ss_pred EcCCC
Confidence 77754
No 304
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.20 E-value=0.00096 Score=65.14 Aligned_cols=113 Identities=15% Similarity=0.057 Sum_probs=75.8
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
..+|.|+|+ |.||..+++++.+.|++ .++..+|.+..+ .. . ++.++.|++|+.+...++|++++++|+.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~g~---~i--~---G~~vy~sl~el~~~~~~~DvaIi~vp~~- 82 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKGGS---EV--H---GVPVYDSVKEALAEHPEINTSIVFVPAP- 82 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC---EE--T---TEEEESSHHHHHHHCTTCCEEEECCCGG-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCCCc---eE--C---CEeeeCCHHHHhhcCCCCCEEEEecCHH-
Confidence 357888898 99999999999999998 556666553200 00 1 3678889999876311289999999986
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCch-hHHHHHHHHHHcCCeEEe
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAELGLLYLG 131 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~i~ 131 (487)
.+.++++++... .. +.+|..+++.+. +..++.+.+++.|+.+++
T Consensus 83 ~~~~~v~ea~~~-Gi-~~vVi~t~G~~~~~~~~l~~~A~~~gi~viG 127 (297)
T 2yv2_A 83 FAPDAVYEAVDA-GI-RLVVVITEGIPVHDTMRFVNYARQKGATIIG 127 (297)
T ss_dssp GHHHHHHHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 566666665553 11 334445655554 345566677778887764
No 305
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.18 E-value=0.0039 Score=61.20 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=59.1
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHC-C--CcEEEEeCChHHHHHHHHhhhhcCCCCcccc----CCHHHHHhhcCCCcEEEE
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEK-G--FPISVYNRTTSKVDETVERAKKEGDLPLFGF----RDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~-G--~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~----~s~~e~~~~l~~advIi~ 79 (487)
|||+||| +|.+|.+++..|... + .++.++|+++ +++......... .+..... ++..+..++ +|+||+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~-~~~~~v~~~~~~~~~~~~~~---aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-PTAVKIKGFSGEDATPALEG---ADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS-CSSEEEEEECSSCCHHHHTT---CSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC-CCCceEEEecCCCcHHHhCC---CCEEEE
Confidence 6999999 899999999999875 5 4899999987 322111111110 1111221 234444454 999999
Q ss_pred ecCCCh----h-----------HHHHHHHHhhcccCCCEEEecCCC
Q 011394 80 LVKAGA----P-----------VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 80 ~vp~~~----~-----------v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+...+. . ++++.+.+..+ .++.+++..||.
T Consensus 76 ~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNP 120 (312)
T 3hhp_A 76 SAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNP 120 (312)
T ss_dssp CCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSC
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCc
Confidence 875432 1 22333455554 467788888764
No 306
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.14 E-value=0.00076 Score=67.62 Aligned_cols=101 Identities=14% Similarity=0.125 Sum_probs=69.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCC----hHH----HHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT----TSK----VDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~----~~~----~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advI 77 (487)
..||.|+|+|.+|..+|+.|...|. +|+++||+ .++ +..+.+.....-+ ......+++|+++. +|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~-~~~~~~~L~eav~~---ADVl 267 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITN-PERLSGDLETALEG---ADFF 267 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC-TTCCCSCHHHHHTT---CSEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhh-ccCchhhHHHHHcc---CCEE
Confidence 4589999999999999999999998 89999998 554 2222222221100 11224578888887 9999
Q ss_pred EEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhH
Q 011394 78 IMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENT 115 (487)
Q Consensus 78 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~ 115 (487)
|-+..++...+ ++...+.++.+|+++||..|+.+
T Consensus 268 IG~Sap~l~t~----emVk~Ma~~pIIfalSNPt~E~~ 301 (388)
T 1vl6_A 268 IGVSRGNILKP----EWIKKMSRKPVIFALANPVPEID 301 (388)
T ss_dssp EECSCSSCSCH----HHHTTSCSSCEEEECCSSSCSSC
T ss_pred EEeCCCCccCH----HHHHhcCCCCEEEEcCCCCCCCC
Confidence 88765332233 33444667889999999776544
No 307
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.10 E-value=0.00067 Score=66.46 Aligned_cols=109 Identities=13% Similarity=0.036 Sum_probs=75.8
Q ss_pred CcEEEE-cc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCC
Q 011394 8 TRIGLA-GL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiI-Gl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~--~l~~advIi~~vp~ 83 (487)
.+|+|| |+ |.+|...+++|.+.|++ .+|+.||.+.. +.. . ++.+..+++|+.+ . +|++++++|+
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G~~-~v~~VnP~~~g---~~i--~---G~~vy~sl~el~~~~~---vD~avI~vP~ 81 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYGTN-LVGGTTPGKGG---KTH--L---GLPVFNTVKEAKEQTG---ATASVIYVPP 81 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT---CEE--T---TEEEESSHHHHHHHHC---CCEEEECCCH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCCCc-EEEEeCCCcCc---ceE--C---CeeeechHHHhhhcCC---CCEEEEecCH
Confidence 468999 98 99999999999999999 55666665321 000 1 3677889999987 5 9999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCch-hHHHHHHHHHHc-CCeEEe
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAEL-GLLYLG 131 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~-g~~~i~ 131 (487)
. .+.++++++... .- +.++..+.+.+. +..++.+.+++. |+.+++
T Consensus 82 ~-~~~~~~~e~i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~liG 128 (305)
T 2fp4_A 82 P-FAAAAINEAIDA-EV-PLVVCITEGIPQQDMVRVKHRLLRQGKTRLIG 128 (305)
T ss_dssp H-HHHHHHHHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHTTCSSCEEEC
T ss_pred H-HHHHHHHHHHHC-CC-CEEEEECCCCChHHHHHHHHHHHhcCCcEEEe
Confidence 6 566666665543 12 344445555443 344666777778 888764
No 308
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.10 E-value=0.0028 Score=63.04 Aligned_cols=97 Identities=12% Similarity=0.165 Sum_probs=60.5
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC-CcEE-EEeCChHHHHHHHHhhhhc--C---------CCCccccCCHHHHHhhcCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG-FPIS-VYNRTTSKVDETVERAKKE--G---------DLPLFGFRDPESFVNSIQK 73 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G-~~V~-v~dr~~~~~~~l~~~~~~~--g---------~~~~~~~~s~~e~~~~l~~ 73 (487)
|.||||+|+|.||+.+++.|.++. .+|. +.|++++....+....... . ..++....+++++...
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~--- 77 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKT--- 77 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHH---
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcC---
Confidence 358999999999999999998764 4554 6688876655554431100 0 0011122344555445
Q ss_pred CcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 74 PRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 74 advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+|+||.|+|... ..+... .++..|..+|+.|..
T Consensus 78 vDvV~~aTp~~~-s~~~a~---~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 78 SDIVVDTTPNGV-GAQYKP---IYLQLQRNAIFQGGE 110 (340)
T ss_dssp CSEEEECCSTTH-HHHHHH---HHHHTTCEEEECTTS
T ss_pred CCEEEECCCCch-hHHHHH---HHHHcCCeEEEeCCC
Confidence 899999998763 233332 234567778888765
No 309
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.10 E-value=0.00033 Score=70.28 Aligned_cols=99 Identities=14% Similarity=0.281 Sum_probs=57.4
Q ss_pred CCCCCCC-CcEEEEc-ccHHHHHHHHHHHHCC-CcEEEEeCChH----HHHHHHHh--------hhhcCCCCcccc-CCH
Q 011394 1 MVEGKQL-TRIGLAG-LAVMGQNLALNIAEKG-FPISVYNRTTS----KVDETVER--------AKKEGDLPLFGF-RDP 64 (487)
Q Consensus 1 ~~~~~~~-~kIgiIG-lG~mG~~lA~~L~~~G-~~V~v~dr~~~----~~~~l~~~--------~~~~g~~~~~~~-~s~ 64 (487)
|.++++| +||+|+| .|.+|..+.+.|.++. ++|...++++. .++..... +.. .+... .++
T Consensus 1 m~~~~~M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 76 (354)
T 1ys4_A 1 MSKGEKMKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIK----DMVVIPTDP 76 (354)
T ss_dssp ------CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHH----TCBCEESCT
T ss_pred CCCcccccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCce----eeEEEeCCH
Confidence 6566644 5899999 8999999999998775 57776643321 12211100 000 11111 245
Q ss_pred HHHHh-hcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 65 ESFVN-SIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 65 ~e~~~-~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+++.+ . +|+||+|+|.. ...+....+ +..|..|||.|+.
T Consensus 77 ~~~~~~~---~DvV~~atp~~-~~~~~a~~~---~~aG~~VId~s~~ 116 (354)
T 1ys4_A 77 KHEEFED---VDIVFSALPSD-LAKKFEPEF---AKEGKLIFSNASA 116 (354)
T ss_dssp TSGGGTT---CCEEEECCCHH-HHHHHHHHH---HHTTCEEEECCST
T ss_pred HHHhcCC---CCEEEECCCch-HHHHHHHHH---HHCCCEEEECCch
Confidence 55444 4 99999999875 334444433 4578889999875
No 310
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.10 E-value=0.00078 Score=65.26 Aligned_cols=75 Identities=16% Similarity=0.320 Sum_probs=57.3
Q ss_pred CcEEEEcccH-HHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++.|||.|. +|.++|..|.+.|.+|+++++....++ +++.+++ +|+||.+++.+..
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------l~~~~~~---ADIVI~Avg~p~~ 223 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------MIDYLRT---ADIVIAAMGQPGY 223 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------HHHHHHT---CSEEEECSCCTTC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------hhhhhcc---CCEEEECCCCCCC
Confidence 4799999877 899999999999999999997432111 1155565 9999999987643
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+. ...+++|.+|||.+..
T Consensus 224 I~------~~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 224 VK------GEWIKEGAAVVDVGTT 241 (300)
T ss_dssp BC------GGGSCTTCEEEECCCE
T ss_pred Cc------HHhcCCCcEEEEEecc
Confidence 22 2457899999999864
No 311
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.08 E-value=0.00098 Score=64.50 Aligned_cols=98 Identities=18% Similarity=0.139 Sum_probs=64.4
Q ss_pred CCCcEEEEc-ccHHHHHHHHHHHHC-CCcEE-EEeCChHH-----HHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011394 6 QLTRIGLAG-LAVMGQNLALNIAEK-GFPIS-VYNRTTSK-----VDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (487)
Q Consensus 6 ~~~kIgiIG-lG~mG~~lA~~L~~~-G~~V~-v~dr~~~~-----~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advI 77 (487)
.++||+|+| +|.||+.+++.+.+. ++++. ++|+++.. +.++.... ..++.++++++++... +|+|
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~----~~gv~v~~dl~~ll~~---aDVv 92 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD----FLGVRITDDPESAFSN---TEGI 92 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS----CCSCBCBSCHHHHTTS---CSEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC----cCCceeeCCHHHHhcC---CCEE
Confidence 346899999 999999999998754 66755 56887532 11111100 1246778899998776 9999
Q ss_pred EEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchh
Q 011394 78 IMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYEN 114 (487)
Q Consensus 78 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~ 114 (487)
|-+.++. .+.+.+ ...+..|.-+|.++|+....
T Consensus 93 IDFT~p~-a~~~~~---~~~l~~Gv~vViGTTG~~~e 125 (288)
T 3ijp_A 93 LDFSQPQ-ASVLYA---NYAAQKSLIHIIGTTGFSKT 125 (288)
T ss_dssp EECSCHH-HHHHHH---HHHHHHTCEEEECCCCCCHH
T ss_pred EEcCCHH-HHHHHH---HHHHHcCCCEEEECCCCCHH
Confidence 9877543 333333 33455688888888886543
No 312
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.04 E-value=0.00067 Score=57.07 Aligned_cols=103 Identities=12% Similarity=0.089 Sum_probs=74.4
Q ss_pred CCcEEEEcc----cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
..+|+|||+ +..|..+.++|.+.||+|+-.|+..+.+. +.....|++|+-. .|++++++|
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~------------G~~~y~sl~dlp~----vDlavi~~p 67 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVL------------GKTIINERPVIEG----VDTVTLYIN 67 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEET------------TEECBCSCCCCTT----CCEEEECSC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCC------------CeeccCChHHCCC----CCEEEEEeC
Confidence 457999997 67999999999999999998887644321 2456777776543 799999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
+. .+.++++++...- ...+|+..+.. .+++.+.+++.|+++++
T Consensus 68 ~~-~v~~~v~e~~~~g-~k~v~~~~G~~----~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 68 PQ-NQLSEYNYILSLK-PKRVIFNPGTE----NEELEEILSENGIEPVI 110 (122)
T ss_dssp HH-HHGGGHHHHHHHC-CSEEEECTTCC----CHHHHHHHHHTTCEEEE
T ss_pred HH-HHHHHHHHHHhcC-CCEEEECCCCC----hHHHHHHHHHcCCeEEC
Confidence 75 6777787776643 23466544432 24666777888999884
No 313
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.04 E-value=0.0002 Score=69.15 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=59.4
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHH-CCCcEE-EEeCChHHH--HHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAE-KGFPIS-VYNRTTSKV--DETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~-~G~~V~-v~dr~~~~~--~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
+|||+|+|+ |.||+.++..+.+ .|++|. ++|+++++. ..+.+..... ..++...++++++++. +|+||-+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~-~~~v~~~~dl~~~l~~---~DvVIDft 80 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG-KTGVTVQSSLDAVKDD---FDVFIDFT 80 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS-CCSCCEESCSTTTTTS---CSEEEECS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC-cCCceecCCHHHHhcC---CCEEEEcC
Confidence 469999998 9999999998874 577777 789876431 0000000000 0123446677776654 99999555
Q ss_pred CCChhHHHHHHHHhhcccCCCEEEecCCCCc
Q 011394 82 KAGAPVDETIKTLSAYMEKGDCIIDGGNEWY 112 (487)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~st~~~ 112 (487)
++. ...+.+. ..+..|.-+|..+|+..
T Consensus 81 ~p~-~~~~~~~---~a~~~G~~vVigTtG~~ 107 (273)
T 1dih_A 81 RPE-GTLNHLA---FCRQHGKGMVIGTTGFD 107 (273)
T ss_dssp CHH-HHHHHHH---HHHHTTCEEEECCCCCC
T ss_pred ChH-HHHHHHH---HHHhCCCCEEEECCCCC
Confidence 432 3444443 33456777777776543
No 314
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.99 E-value=0.004 Score=59.10 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=31.1
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCCh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTT 40 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~ 40 (487)
++|.|||+|.+|..++.+|++.|. +|+++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 589999999999999999999997 899999987
No 315
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=96.99 E-value=0.033 Score=52.83 Aligned_cols=151 Identities=13% Similarity=0.066 Sum_probs=103.7
Q ss_pred CccccCCHHHHHhhcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011394 57 PLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (487)
Q Consensus 57 ~~~~~~s~~e~~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsg 136 (487)
+++++++..|+++. +|++|+-+|-+.....+++.+++++++|.+|.++.|.+|..--...+.+..+.+.+..+...+
T Consensus 128 GVkVtsDD~EAvk~---AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCTipp~~ly~~le~l~R~DvgIsS~HPaa 204 (358)
T 2b0j_A 128 GLKVTSDDREAVEG---ADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGC 204 (358)
T ss_dssp TCEEESCHHHHHTT---CSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECBCSS
T ss_pred CcEeecchHHHhcC---CCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccCCCHHHHHHHHHHhCcccCCeeccCCCC
Confidence 57788889999987 999999999998788899999999999999999999987766555555554456555542211
Q ss_pred ChhhhcCCCcccc-C-CCHHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Q 011394 137 GEEGARHGPSLMP-G-GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV 214 (487)
Q Consensus 137 g~~~a~~G~~i~~-g-g~~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~ 214 (487)
.++. .|.++.. + .+++..+++.+|.++.+.. .+.+-..=.+...-|. ..+.+...+.+.+-+....+.
T Consensus 205 -VPgt-~Gq~~~g~~yAtEEqIeklveLaksa~k~-------ay~vPAdl~SpV~DMg-s~vTAv~~AGiL~Y~~~vtkI 274 (358)
T 2b0j_A 205 -VPEM-KGQVYIAEGYASEEAVNKLYEIGKIARGK-------AFKMPANLIGPVCDMC-SAVTATVYAGLLAYRDAVTKI 274 (358)
T ss_dssp -CTTT-CCCEEEEESSSCHHHHHHHHHHHHHHHSC-------EEEEEHHHHHHHHSTT-HHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCCC-CCccccccccCCHHHHHHHHHHHHHhCCC-------eEecchhhccchhhhH-HHHHHHHHHHHHHHHHHHHHH
Confidence 1111 4553332 2 3889999999999999876 2444323333333332 244555677777777777665
Q ss_pred CCCCHH
Q 011394 215 GKLTNE 220 (487)
Q Consensus 215 g~i~~~ 220 (487)
-|.+.+
T Consensus 275 lgAP~~ 280 (358)
T 2b0j_A 275 LGAPAD 280 (358)
T ss_dssp SCCCHH
T ss_pred hcCcHH
Confidence 545544
No 316
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.97 E-value=0.014 Score=55.12 Aligned_cols=98 Identities=14% Similarity=0.195 Sum_probs=59.8
Q ss_pred CcEEEEcc-cHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 8 TRIGLAGL-AVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 8 ~kIgiIGl-G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
|||+|+|+ |.||+.++..+.+. +++|. ++|++. +++++.. ..+|+||-+.++.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~----------------------dl~~~~~--~~~DvvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD----------------------PLSLLTD--GNTEVVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC----------------------CTHHHHH--TTCCEEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC----------------------CHHHHhc--cCCcEEEEccChH
Confidence 58999996 99999999998865 89887 556541 2333333 1289999666544
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCCCchhHH-HHHHHHHHc-CCeEEecC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTE-RREKAMAEL-GLLYLGMG 133 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~-~~~~~l~~~-g~~~i~~p 133 (487)
.+...+... +..|.-+|.++|+...... ++.+..++. ++..+-+|
T Consensus 57 -a~~~~~~~a---~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~ 103 (245)
T 1p9l_A 57 -VVMGNLEFL---IDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAP 103 (245)
T ss_dssp -THHHHHHHH---HHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECS
T ss_pred -HHHHHHHHH---HHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEEC
Confidence 455544433 4467767777776544322 223333322 56555454
No 317
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.94 E-value=0.0016 Score=62.55 Aligned_cols=73 Identities=16% Similarity=0.261 Sum_probs=57.9
Q ss_pred CcEEEEcccH-HHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++.|||.|. +|.++|..|...|.+|++++++. .++++.+++ +|+||.+++.+..
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------------------~~L~~~~~~---ADIVI~Avg~p~~ 217 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT---------------------TDLKSHTTK---ADILIVAVGKPNF 217 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SSHHHHHTT---CSEEEECCCCTTC
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHhccc---CCEEEECCCCCCC
Confidence 4799999887 79999999999999999998642 245566666 9999999987643
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+. ...+++|.+|||.+..
T Consensus 218 I~------~~~vk~GavVIDvgi~ 235 (285)
T 3l07_A 218 IT------ADMVKEGAVVIDVGIN 235 (285)
T ss_dssp BC------GGGSCTTCEEEECCCE
T ss_pred CC------HHHcCCCcEEEEeccc
Confidence 22 2457899999999864
No 318
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.94 E-value=0.0014 Score=63.10 Aligned_cols=73 Identities=18% Similarity=0.336 Sum_probs=58.3
Q ss_pred CcEEEEcccH-HHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++.|||.|. +|.++|..|...|.+|+++++.. .++++.+++ +|+||.+++.+..
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------------------~~L~~~~~~---ADIVI~Avg~p~l 215 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT---------------------KNLRHHVEN---ADLLIVAVGKPGF 215 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC---------------------SCHHHHHHH---CSEEEECSCCTTC
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHhcc---CCEEEECCCCcCc
Confidence 4799999996 69999999999999999997543 356666676 9999999987642
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+. ...+++|.+|||.+..
T Consensus 216 I~------~~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 216 IP------GDWIKEGAIVIDVGIN 233 (288)
T ss_dssp BC------TTTSCTTCEEEECCCE
T ss_pred CC------HHHcCCCcEEEEccCC
Confidence 21 1346899999999865
No 319
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.94 E-value=0.0016 Score=63.02 Aligned_cols=74 Identities=12% Similarity=0.203 Sum_probs=58.9
Q ss_pred CcEEEEcccH-HHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++.|||.|. +|.++|..|...|.+|++++++ +.++++.++. +|+||.+++.+..
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------------------t~~L~~~~~~---ADIVI~Avg~p~~ 221 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK---------------------TAHLDEEVNK---GDILVVATGQPEM 221 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------------------CSSHHHHHTT---CSEEEECCCCTTC
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECC---------------------cccHHHHhcc---CCEEEECCCCccc
Confidence 4799999995 7999999999999999999854 2356666666 9999999988643
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+. ...+++|.+|||.+...
T Consensus 222 I~------~~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 222 VK------GEWIKPGAIVIDCGINY 240 (301)
T ss_dssp BC------GGGSCTTCEEEECCCBC
T ss_pred CC------HHHcCCCcEEEEccCCC
Confidence 22 13467999999998754
No 320
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.94 E-value=0.0015 Score=62.83 Aligned_cols=73 Identities=19% Similarity=0.291 Sum_probs=58.3
Q ss_pred CcEEEEcccH-HHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++.|||.|. +|.++|..|...|.+|++++++. .++++.++. +|+||.+++.+..
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t---------------------~~L~~~~~~---ADIVI~Avg~p~~ 216 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT---------------------KDLSLYTRQ---ADLIIVAAGCVNL 216 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SCHHHHHTT---CSEEEECSSCTTC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHhhc---CCEEEECCCCCCc
Confidence 4799999887 69999999999999999998642 245666666 9999999987643
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+. ...+++|.+|||.+..
T Consensus 217 I~------~~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 217 LR------SDMVKEGVIVVDVGIN 234 (285)
T ss_dssp BC------GGGSCTTEEEEECCCE
T ss_pred CC------HHHcCCCeEEEEeccC
Confidence 22 2457899999999864
No 321
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.94 E-value=0.0021 Score=63.90 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=60.9
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhh--hcC----------CCCccccCCHHHHHhhcC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAK--KEG----------DLPLFGFRDPESFVNSIQ 72 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~--~~g----------~~~~~~~~s~~e~~~~l~ 72 (487)
|+||||+|+|.||+.+++.|.++ +++|. +.|+++.....+..... ..+ +.++....+++++...
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~-- 78 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDE-- 78 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHT--
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcC--
Confidence 45899999999999999999874 45664 46777665554443210 000 0012222356666655
Q ss_pred CCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 73 KPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 73 ~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+|+||.|+|.... .+..... +..|..|||.+..
T Consensus 79 -vDvV~~atp~~~~-~~~a~~~---l~aG~~VId~sp~ 111 (337)
T 1cf2_P 79 -ADIVIDCTPEGIG-AKNLKMY---KEKGIKAIFQGGE 111 (337)
T ss_dssp -CSEEEECCSTTHH-HHHHHHH---HHHTCCEEECTTS
T ss_pred -CCEEEECCCchhh-HHHHHHH---HHcCCEEEEecCC
Confidence 9999999998743 3333333 3456678888765
No 322
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.93 E-value=0.0023 Score=58.65 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=48.1
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
|||.|+| .|.+|+.++..|++.|++|++.+|++++.+.+. ..... ......+...+.. ..+|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~--~~~D~~d~~~~~~---~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINI--LQKDIFDLTLSDL---SDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEE--EECCGGGCCHHHH---TTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeE--EeccccChhhhhh---cCCCEEEECCcC
Confidence 5899999 699999999999999999999999998876653 11100 0001111111333 449999998754
No 323
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.92 E-value=0.00064 Score=63.65 Aligned_cols=73 Identities=8% Similarity=0.224 Sum_probs=49.6
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~--~~s~~e~~~~l~~advIi~~vp 82 (487)
|++|-|.| .|.+|..+++.|++.| ++|.+++|++++.+.+...... +.. ..+.+++.+.++.+|+||.+..
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~-----~~~~Dl~d~~~~~~~~~~~D~vv~~a~ 97 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQ-----IIMGDVLNHAALKQAMQGQDIVYANLT 97 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEE-----EEECCTTCHHHHHHHHTTCSEEEEECC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcE-----EEEecCCCHHHHHHHhcCCCEEEEcCC
Confidence 45788888 7999999999999999 8999999998875432211100 000 1244444444445899988776
Q ss_pred CC
Q 011394 83 AG 84 (487)
Q Consensus 83 ~~ 84 (487)
..
T Consensus 98 ~~ 99 (236)
T 3qvo_A 98 GE 99 (236)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 324
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.91 E-value=0.0013 Score=62.97 Aligned_cols=73 Identities=18% Similarity=0.351 Sum_probs=57.7
Q ss_pred CcEEEEcccHH-HHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 8 TRIGLAGLAVM-GQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 8 ~kIgiIGlG~m-G~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
+++.|||.|.| |.++|..|.+. |.+|++++++. .++.+.+++ +|+||.+++.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------------------~~L~~~~~~---ADIVI~Avg~p 214 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------------------RDLPALTRQ---ADIVVAAVGVA 214 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC---------------------SCHHHHHTT---CSEEEECSCCT
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch---------------------hHHHHHHhh---CCEEEECCCCC
Confidence 47999999976 99999999999 88999997553 245566666 99999999877
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..+. ...+++|.+|||.+..
T Consensus 215 ~~I~------~~~vk~GavVIDVgi~ 234 (281)
T 2c2x_A 215 HLLT------ADMVRPGAAVIDVGVS 234 (281)
T ss_dssp TCBC------GGGSCTTCEEEECCEE
T ss_pred cccC------HHHcCCCcEEEEccCC
Confidence 4221 2346789999999864
No 325
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.88 E-value=0.00093 Score=66.32 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=59.1
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHC-CCcEEEEeCCh---HHHHHHHHhhhh-cCCCCccccC--CHHHHHhhcCCCcEEE
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEK-GFPISVYNRTT---SKVDETVERAKK-EGDLPLFGFR--DPESFVNSIQKPRVII 78 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~-G~~V~v~dr~~---~~~~~l~~~~~~-~g~~~~~~~~--s~~e~~~~l~~advIi 78 (487)
|+||+|+| .|.+|..+.+.|.++ .+++.....+. ..-+.+.+.... .+........ +.+++.+. +|+||
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~---~Dvvf 80 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPG---VDVVF 80 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTT---CSEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcC---CCEEE
Confidence 67999999 699999999999985 45777653332 211122211100 0000122222 34444344 99999
Q ss_pred EecCCChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 79 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+|+|.. ...+....+ +..|..|||.|+-.
T Consensus 81 ~a~p~~-~s~~~~~~~---~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 81 LATAHE-VSHDLAPQF---LEAGCVVFDLSGAF 109 (337)
T ss_dssp ECSCHH-HHHHHHHHH---HHTTCEEEECSSTT
T ss_pred ECCChH-HHHHHHHHH---HHCCCEEEEcCCcc
Confidence 999975 334444433 45789999999875
No 326
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.83 E-value=0.0027 Score=60.94 Aligned_cols=116 Identities=16% Similarity=0.111 Sum_probs=76.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.++-|+|+|-.+++++..|++.|. +|+++||+.++.+++.+...... ......... ..++++|+||-++|-+-.
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~-~~~~~~~~~----~~~~~~dliiNaTp~Gm~ 200 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGF-PGLTVSTQF----SGLEDFDLVANASPVGMG 200 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHC-TTCEEESCC----SCSTTCSEEEECSSTTCS
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccC-Ccceehhhh----hhhhcccccccCCccccC
Confidence 579999999999999999999996 89999999999998877543210 001111111 123348999999986521
Q ss_pred HH---HHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011394 87 VD---ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 87 v~---~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i 130 (487)
-. .+-......+.++.++.|.--. |..| .+.+..+++|...+
T Consensus 201 ~~~~~p~~~~~~~~l~~~~~v~D~vY~-P~~T-~ll~~A~~~G~~~~ 245 (269)
T 3tum_A 201 TRAELPLSAALLATLQPDTLVADVVTS-PEIT-PLLNRARQVGCRIQ 245 (269)
T ss_dssp TTCCCSSCHHHHHTCCTTSEEEECCCS-SSSC-HHHHHHHHHTCEEE
T ss_pred CCCCCCCChHHHhccCCCcEEEEEccC-CCCC-HHHHHHHHCcCEEE
Confidence 11 0112334557889999999654 3444 34455567776654
No 327
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.81 E-value=0.021 Score=55.50 Aligned_cols=104 Identities=15% Similarity=0.083 Sum_probs=76.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCCh
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 403 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~ 403 (487)
.+.++.+|.+.|.+.+..+..++|++.+.++. ++|..++.++++.| ..+|++++.....+.+.+ .. +
T Consensus 172 ~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~d~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~-~~-----~ 238 (303)
T 3g0o_A 172 PGAGSTVKIIHQLLAGVHIAAAAEAMALAARA------GIPLDVMYDVVTHA-AGNSWMFENRMQHVVDGD-YT-----P 238 (303)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHTTS-TTCCHHHHHHHHHHHTTC-CC-----C
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhc-ccCCHHHHhhhHHHhcCC-CC-----C
Confidence 37789999999999999999999999988753 49999999999987 457888776544433322 11 1
Q ss_pred hHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011394 404 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 442 (487)
Q Consensus 404 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~ 442 (487)
-|. +......++.++..|.+.|+|+|.+.++...|..
T Consensus 239 ~~~--~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~ 275 (303)
T 3g0o_A 239 RSA--VDIFVKDLGLVADTAKALRFPLPLASTALNMFTS 275 (303)
T ss_dssp SSB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CCc--hHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 111 1122344678999999999999999988876643
No 328
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.80 E-value=0.0058 Score=56.85 Aligned_cols=72 Identities=14% Similarity=0.074 Sum_probs=51.3
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-hcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-KEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
.|+|.|.|. |.+|..+++.|++.|++|++.+|++++.+.+...+. .. .......++.+. +.++|+||.+...
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~--~~~Dl~~~~~~~---~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDI--VVANLEEDFSHA---FASIDAVVFAAGS 94 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEE--EECCTTSCCGGG---GTTCSEEEECCCC
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceE--EEcccHHHHHHH---HcCCCEEEECCCC
Confidence 468999986 999999999999999999999999998887765332 10 000111233333 4459999988754
No 329
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.80 E-value=0.0025 Score=61.24 Aligned_cols=74 Identities=22% Similarity=0.368 Sum_probs=58.4
Q ss_pred CcEEEEcccH-HHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++.|||.|. +|.++|..|...|.+|+++++.. .++++.+++ +|+||.+++.+..
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T---------------------~~L~~~~~~---ADIVI~Avg~p~~ 217 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT---------------------RDLADHVSR---ADLVVVAAGKPGL 217 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC---------------------SCHHHHHHT---CSEEEECCCCTTC
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC---------------------cCHHHHhcc---CCEEEECCCCCCC
Confidence 4799999876 89999999999999999997532 245666676 9999999987643
Q ss_pred HHHHHHHHhhcccCCCEEEecCCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+. ...+++|.+|||.+...
T Consensus 218 I~------~~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 218 VK------GEWIKEGAIVIDVGINR 236 (286)
T ss_dssp BC------GGGSCTTCEEEECCSCS
T ss_pred CC------HHHcCCCeEEEEecccc
Confidence 22 24578999999998653
No 330
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.78 E-value=0.0021 Score=59.33 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=50.0
Q ss_pred CCCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecC
Q 011394 6 QLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~--~~s~~e~~~~l~~advIi~~vp 82 (487)
.||+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.... .+.. ..+.+++.+.++++|+||.+..
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~Dl~d~~~~~~~~~~~d~vi~~a~ 76 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHL------KVKKADVSSLDEVCEVCKGADAVISAFN 76 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTE------EEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCce------EEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence 368999998 699999999999999999999999987654321100 0001 1244444444445899988875
Q ss_pred C
Q 011394 83 A 83 (487)
Q Consensus 83 ~ 83 (487)
.
T Consensus 77 ~ 77 (227)
T 3dhn_A 77 P 77 (227)
T ss_dssp C
T ss_pred C
Confidence 4
No 331
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.78 E-value=0.006 Score=63.07 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=67.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChH----HHHHHHHhhhhcCCCCccccCCHHHHHhhcCC-CcEEEEe-
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS----KVDETVERAKKEGDLPLFGFRDPESFVNSIQK-PRVIIML- 80 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~----~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~-advIi~~- 80 (487)
.++|.|||+|..|.+.|+.|.+.|++|+++|+++. ..+.+.+.+. .+..-..+++... . +|+||++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi-----~~~~g~~~~~~~~---~~~d~vv~sp 80 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGI-----KVVCGSHPLELLD---EDFCYMIKNP 80 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTC-----EEEESCCCGGGGG---SCEEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCC-----EEEECCChHHhhc---CCCCEEEECC
Confidence 36899999999999999999999999999998642 3444544332 1222223333322 3 7888886
Q ss_pred -cCCChh-HHHHHH---------HHhhcccCCC-EEEecCCCCchhHHHHHHHHHHcCCeE
Q 011394 81 -VKAGAP-VDETIK---------TLSAYMEKGD-CIIDGGNEWYENTERREKAMAELGLLY 129 (487)
Q Consensus 81 -vp~~~~-v~~vl~---------~l~~~l~~g~-iiId~st~~~~~~~~~~~~l~~~g~~~ 129 (487)
+|.+.. +....+ +++..+.+.. |-|-.|++...++.-+...+...|...
T Consensus 81 gi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~ 141 (451)
T 3lk7_A 81 GIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQRG 141 (451)
T ss_dssp TSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTCCE
T ss_pred cCCCCChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCE
Confidence 443321 222111 2222223344 444455665555555566777777643
No 332
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.76 E-value=0.0031 Score=62.46 Aligned_cols=113 Identities=7% Similarity=0.056 Sum_probs=70.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHh-hcCCCcEEEEecCCCh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVN-SIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~-~l~~advIi~~vp~~~ 85 (487)
++|-|+|.|.+|..+++.|.+.|+ |.+.|+++++++ +.+.+... +.. .++.+.+.+ .++++|.++++++++.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~----i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~ 189 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANF----VHGDPTRVSDLEKANVRGARAVIVDLESDS 189 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEE----EESCTTSHHHHHHTCSTTEEEEEECCSSHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEE----EEeCCCCHHHHHhcChhhccEEEEcCCccH
Confidence 479999999999999999999999 999999999998 66533210 111 223333332 2567999999998753
Q ss_pred hHHHHHHHHhhcccCC-CEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 86 PVDETIKTLSAYMEKG-DCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
. .-..-..+..+.+. .++.-..+. ... +.+...|+..+-.|
T Consensus 190 ~-n~~~~~~ar~~~~~~~iiar~~~~--~~~----~~l~~~G~d~vi~~ 231 (336)
T 1lnq_A 190 E-TIHCILGIRKIDESVRIIAEAERY--ENI----EQLRMAGADQVISP 231 (336)
T ss_dssp H-HHHHHHHHHTTCTTSEEEEECSSG--GGH----HHHHHTTCSEEECH
T ss_pred H-HHHHHHHHHHHCCCCeEEEEECCH--HHH----HHHHHcCCCEEECh
Confidence 2 22222333445555 555554432 222 33445566654333
No 333
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.76 E-value=0.00036 Score=64.43 Aligned_cols=82 Identities=18% Similarity=0.293 Sum_probs=55.0
Q ss_pred CCcEEEEcccHHHHHHHHHH--HHCCCcEE-EEeCChH-HHHH-HHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 7 LTRIGLAGLAVMGQNLALNI--AEKGFPIS-VYNRTTS-KVDE-TVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L--~~~G~~V~-v~dr~~~-~~~~-l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
..+|+|||+|++|..++..+ .+.|+++. ++|.+++ +... ... +.++...++++++++. .+.|.+++|+
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~------GvpV~~~~dL~~~v~~-~~Id~vIIAv 156 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTED------GIPVYGISTINDHLID-SDIETAILTV 156 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTT------CCBEEEGGGHHHHC-C-CSCCEEEECS
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeEC------CeEEeCHHHHHHHHHH-cCCCEEEEec
Confidence 45899999999999999873 45577665 5699988 6532 111 1123345566676664 3489999999
Q ss_pred CCChhHHHHHHHHhh
Q 011394 82 KAGAPVDETIKTLSA 96 (487)
Q Consensus 82 p~~~~v~~vl~~l~~ 96 (487)
|+. ...++.+.+.+
T Consensus 157 Ps~-~aq~v~d~lv~ 170 (212)
T 3keo_A 157 PST-EAQEVADILVK 170 (212)
T ss_dssp CGG-GHHHHHHHHHH
T ss_pred Cch-hHHHHHHHHHH
Confidence 986 44566655553
No 334
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.75 E-value=0.004 Score=57.22 Aligned_cols=40 Identities=15% Similarity=0.312 Sum_probs=36.1
Q ss_pred CcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 011394 8 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETV 47 (487)
Q Consensus 8 ~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~ 47 (487)
|||.|+|. |.+|+.++..|++.|++|++.+|++++.+.+.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~ 41 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL 41 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc
Confidence 58999986 99999999999999999999999998876653
No 335
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.70 E-value=0.027 Score=55.25 Aligned_cols=103 Identities=12% Similarity=0.103 Sum_probs=78.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCChh
Q 011394 325 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPE 404 (487)
Q Consensus 325 ~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~~ 404 (487)
+.++.+|+++|.+.++.+..++|++.+.++. ++|..++.++++.+. .+|++++.....+.+.... +-
T Consensus 193 g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~d~~~~~~~~~~~~-~~s~~~~~~~~~~l~~~~~------~g 259 (320)
T 4dll_A 193 GSGQLTKLANQMIVGITIGAVAEALLFATKG------GADMAKVKEAITGGF-ADSRVLQLHGQRMVERDFA------PR 259 (320)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------SCCHHHHHHHHTTST-TCBHHHHTHHHHHHTTCCC------CS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHccc-ccCHHHHHhhhhhccCCCC------Cc
Confidence 7889999999999999999999999998753 499999999999874 6788887765544433211 11
Q ss_pred HHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011394 405 FAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 442 (487)
Q Consensus 405 ~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~ 442 (487)
|. +.-....++.++..|.+.|+|+|...++...|..
T Consensus 260 f~--~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 295 (320)
T 4dll_A 260 AR--LSIQLKDMRNALATAQEIGFDAPITGLFEQLYAE 295 (320)
T ss_dssp SB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred cc--HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 11 1122345678999999999999999998876654
No 336
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.69 E-value=0.00025 Score=65.65 Aligned_cols=80 Identities=14% Similarity=0.139 Sum_probs=53.9
Q ss_pred CCcEEEEcccHHHHHHHHHHHH-CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAE-KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~-~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
..+|+|||+|.+|..++..+.. .|+++. ++|.++++....... .++...++++++++. +.|.|++|+|+.
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~i~g------v~V~~~~dl~ell~~--~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRG------GVIEHVDLLPQRVPG--RIEIALLTVPRE 151 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETT------EEEEEGGGHHHHSTT--TCCEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhhhhcC------CeeecHHhHHHHHHc--CCCEEEEeCCch
Confidence 4589999999999999986322 277655 669998876432211 123346677887764 489999999975
Q ss_pred hhHHHHHHHHh
Q 011394 85 APVDETIKTLS 95 (487)
Q Consensus 85 ~~v~~vl~~l~ 95 (487)
...++.+.+.
T Consensus 152 -~~~ei~~~l~ 161 (211)
T 2dt5_A 152 -AAQKAADLLV 161 (211)
T ss_dssp -HHHHHHHHHH
T ss_pred -hHHHHHHHHH
Confidence 3344544443
No 337
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.69 E-value=0.0059 Score=59.20 Aligned_cols=127 Identities=15% Similarity=0.207 Sum_probs=70.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.+|.|||+|-.|..++.+|++.|. +++++|.+.=....+.++.-.....+-.-+....+.+..+ .+++-+.+.+..-.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~i-NP~v~v~~~~~~l~ 115 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNI-NPDVLFEVHNYNIT 115 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHH-CTTSEEEEECCCTT
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhh-CCCcEEEEecccCC
Confidence 589999999999999999999997 8999998763332222211000000011112222322222 26677776654311
Q ss_pred HHHHHHHHhh-----cc---cCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011394 87 VDETIKTLSA-----YM---EKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (487)
Q Consensus 87 v~~vl~~l~~-----~l---~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsg 136 (487)
-.+.++.+.. .+ ..-++|||++-.. ..-..+.+.+...++.++.+++++
T Consensus 116 ~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~-~~R~~in~~c~~~~~Pli~~gv~~ 172 (292)
T 3h8v_A 116 TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNF-EARMTINTACNELGQTWMESGVSE 172 (292)
T ss_dssp SHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSH-HHHHHHHHHHHHHTCCEEEEEECT
T ss_pred cHHHHHHHhhhhcccccccCCCCCEEEECCcch-hhhhHHHHHHHHhCCCEEEeeeec
Confidence 1122222221 11 4568999998654 333345566677799999888876
No 338
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.64 E-value=0.0058 Score=60.78 Aligned_cols=96 Identities=8% Similarity=0.054 Sum_probs=57.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhh--hhcCCC------------CccccCCHHHHHhh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERA--KKEGDL------------PLFGFRDPESFVNS 70 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~--~~~g~~------------~~~~~~s~~e~~~~ 70 (487)
|+||||+|+|.+|+.+++.|.++ +++|. +.|++++....+.+.. ...|.+ .+....++.++...
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~ 81 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIED 81 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccC
Confidence 35999999999999999999886 46765 4566666655444331 000000 11222233444334
Q ss_pred cCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecC
Q 011394 71 IQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGG 108 (487)
Q Consensus 71 l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~s 108 (487)
+|+|+.|.|.+.. ..... ..++..|..||+.+
T Consensus 82 ---vDiV~eatg~~~s-~~~a~--~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 82 ---ADIVVDGAPKKIG-KQNLE--NIYKPHKVKAILQG 113 (343)
T ss_dssp ---CSEEEECCCTTHH-HHHHH--HTTTTTTCEEEECT
T ss_pred ---CCEEEECCCcccc-HHHHH--HHHHHCCCEEEECC
Confidence 8999999887632 22222 35677788777643
No 339
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.62 E-value=0.015 Score=56.09 Aligned_cols=104 Identities=13% Similarity=0.154 Sum_probs=78.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCCh
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 403 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~ 403 (487)
.+.++.+|.++|.+.++.+..++|++.+.++. ++|..++.++++.|. ..|++++.....+.+.+....
T Consensus 164 ~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~------G~d~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~----- 231 (287)
T 3pef_A 164 VGKGAEMKLVVNMVMGGMMACFCEGLALGEKA------GLATDAILDVIGAGA-MANPMFALKGGLIRDRNFAPA----- 231 (287)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHST-TCCHHHHHHHHHHHTTCCCCS-----
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhcc-cccHHHHHHhhhhhcCCCCCC-----
Confidence 37889999999999999999999999998863 499999999999873 578887776555544321111
Q ss_pred hHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011394 404 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 442 (487)
Q Consensus 404 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~ 442 (487)
|. +......++.++..|.+.|+|+|.+.++...|..
T Consensus 232 -~~--~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 267 (287)
T 3pef_A 232 -FP--LKHMQKDLRLAVALGDRVGQPLVASAAANELFKG 267 (287)
T ss_dssp -SB--HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred -Cc--hHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 11 1122344789999999999999999988776653
No 340
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.59 E-value=0.0044 Score=61.46 Aligned_cols=100 Identities=12% Similarity=0.165 Sum_probs=60.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHC-CCcEE-EEeC--ChHHHHHHHHhhhhcCCC----------------Ccccc--CCH
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNR--TTSKVDETVERAKKEGDL----------------PLFGF--RDP 64 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr--~~~~~~~l~~~~~~~g~~----------------~~~~~--~s~ 64 (487)
|+||||+|+|++|+.+++.|.++ +.+|. +.|+ +++....+.+.....+.+ .+... .++
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 46999999999999999998875 46766 4464 677766665421110000 01111 245
Q ss_pred HHHHhhcCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 65 ESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 65 ~e~~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+++.-.-.++|+||.|+|.....+ ....++..|..+|++|..
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~~e----~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTTME----KAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHH----HHGGGGGGTCSEEEESSC
T ss_pred HHCccccCCCCEEEECCCchhhHH----HHHHHHhCCCeEEEeccC
Confidence 554100023899999998875432 234566778667777764
No 341
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.58 E-value=0.0041 Score=62.31 Aligned_cols=94 Identities=13% Similarity=0.184 Sum_probs=56.7
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh-cCC--CCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK-EGD--LPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~-~g~--~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
+||+|+| .|.+|+.+.+.|.++.. +|...+...+.-.++...... .+. ..+... + ++..+ ++|+||+|+|
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~-~-~~~~~---~vDvVf~atp 91 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSV-K-DADFS---TVDAVFCCLP 91 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCG-G-GCCGG---GCSEEEECCC
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceec-c-hhHhc---CCCEEEEcCC
Confidence 5899999 89999999999998764 777665433222222211110 000 011111 1 33223 3999999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
..... +. ...+ ..|..|||.|+..
T Consensus 92 ~~~s~-~~---a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 92 HGTTQ-EI---IKEL-PTALKIVDLSADF 115 (359)
T ss_dssp TTTHH-HH---HHTS-CTTCEEEECSSTT
T ss_pred chhHH-HH---HHHH-hCCCEEEECCccc
Confidence 87432 22 2234 6789999999864
No 342
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.58 E-value=0.0027 Score=63.32 Aligned_cols=96 Identities=9% Similarity=0.171 Sum_probs=57.5
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCC-CCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGD-LPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~-~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
|+||+|+| .|.+|+.+.+.|.++.. ++....+..+.-.++........+ ..+. ..++++ +.++|+||+|+|.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~-~~~~~~----~~~vDvV~~a~g~ 78 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLK-FVPPEK----LEPADILVLALPH 78 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCB-CBCGGG----CCCCSEEEECCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccccc-ccchhH----hcCCCEEEEcCCc
Confidence 57999999 79999999999998764 766655433221111110000000 0111 223332 3459999999998
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
.. ..+.... ++..|..|||.|+..
T Consensus 79 ~~-s~~~a~~---~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 79 GV-FAREFDR---YSALAPVLVDLSADF 102 (345)
T ss_dssp TH-HHHTHHH---HHTTCSEEEECSSTT
T ss_pred HH-HHHHHHH---HHHCCCEEEEcCccc
Confidence 73 3333333 345788999999854
No 343
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.56 E-value=0.00092 Score=66.24 Aligned_cols=85 Identities=14% Similarity=0.132 Sum_probs=58.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC---------CcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG---------FPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRV 76 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G---------~~V-~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~adv 76 (487)
++||||||+|.||..++..|.+.. .+| .++|+++++.+.+ . ....++|+++++ . .|+
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~----~-----~~~~~~d~~~ll-~---iDv 69 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAI----P-----QELLRAEPFDLL-E---ADL 69 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSS----C-----GGGEESSCCCCT-T---CSE
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhcc----C-----cccccCCHHHHh-C---CCE
Confidence 368999999999999999998763 444 4779987653221 0 023566777777 4 999
Q ss_pred EEEecCCChhHHHHHHHHhhcccCCCEEEec
Q 011394 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDG 107 (487)
Q Consensus 77 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~ 107 (487)
|+.|+|+.....+.. ...+..|+.|+..
T Consensus 70 Vve~t~~~~~a~~~~---~~AL~aGKhVVta 97 (332)
T 2ejw_A 70 VVEAMGGVEAPLRLV---LPALEAGIPLITA 97 (332)
T ss_dssp EEECCCCSHHHHHHH---HHHHHTTCCEEEC
T ss_pred EEECCCCcHHHHHHH---HHHHHcCCeEEEC
Confidence 999999764333333 3345678877764
No 344
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.54 E-value=0.004 Score=57.26 Aligned_cols=72 Identities=18% Similarity=0.268 Sum_probs=50.7
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCC-HHHHHhhcCCCcEEEEecCCC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRD-PESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s-~~e~~~~l~~advIi~~vp~~ 84 (487)
|||.|+| .|.+|..++..|++.|++|++.+|++++.+.+ ..... .... ..+ .+++.+.++++|+||.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~--~~~D-~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKA--VHFD-VDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEE--EECC-TTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceE--EEec-ccCCHHHHHHHHcCCCEEEECCcCC
Confidence 5899998 89999999999999999999999998765432 00000 0011 123 555666566789998887643
No 345
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=96.54 E-value=0.0022 Score=66.73 Aligned_cols=71 Identities=11% Similarity=0.172 Sum_probs=47.7
Q ss_pred CcEEEEcccHHHHH--HHHHHHHC------CCcEEEEeCChHHHHHHH---Hhhh-hcC-CCCccccCCHHHHHhhcCCC
Q 011394 8 TRIGLAGLAVMGQN--LALNIAEK------GFPISVYNRTTSKVDETV---ERAK-KEG-DLPLFGFRDPESFVNSIQKP 74 (487)
Q Consensus 8 ~kIgiIGlG~mG~~--lA~~L~~~------G~~V~v~dr~~~~~~~l~---~~~~-~~g-~~~~~~~~s~~e~~~~l~~a 74 (487)
|||+|||.|..|.+ +...++.. +.+|.++|.++++++... ++.. ..+ ..++..+++.+++.+. |
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~g---A 77 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEG---A 77 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTT---C
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCC---C
Confidence 69999999998865 33334432 347999999998865432 1111 110 1246677889988877 9
Q ss_pred cEEEEec
Q 011394 75 RVIIMLV 81 (487)
Q Consensus 75 dvIi~~v 81 (487)
|+||+++
T Consensus 78 D~Vi~~~ 84 (477)
T 3u95_A 78 DFIINTA 84 (477)
T ss_dssp SEEEECC
T ss_pred CEEEECc
Confidence 9999986
No 346
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.50 E-value=0.0066 Score=59.17 Aligned_cols=37 Identities=19% Similarity=0.348 Sum_probs=32.1
Q ss_pred CCCCCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCCh
Q 011394 4 GKQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTT 40 (487)
Q Consensus 4 ~~~~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~ 40 (487)
|++||+|.|+| .|.+|..++..|++.|++|.+.+|++
T Consensus 1 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 1 GSHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp ---CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 45678999999 59999999999999999999999986
No 347
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=96.49 E-value=0.018 Score=58.77 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=46.9
Q ss_pred CCcEEEEcccHH-HHHHHHHHHH--C---CCcEEEEeCChHHHHHHHHh---hhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011394 7 LTRIGLAGLAVM-GQNLALNIAE--K---GFPISVYNRTTSKVDETVER---AKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (487)
Q Consensus 7 ~~kIgiIGlG~m-G~~lA~~L~~--~---G~~V~v~dr~~~~~~~l~~~---~~~~g~~~~~~~~s~~e~~~~l~~advI 77 (487)
++||+|||+|.. +..+...|+. . +.+|.++|.++++++..... .... ..++..+++..+.++. ||+|
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~-~~~v~~t~d~~~al~~---AD~V 77 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD-RFKVLISDTFEGAVVD---AKYV 77 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTT-SSEEEECSSHHHHHTT---CSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhC-CeEEEEeCCHHHHhCC---CCEE
Confidence 579999999985 2222234454 3 56899999999886643221 1110 0134555677676666 9999
Q ss_pred EEecCCC
Q 011394 78 IMLVKAG 84 (487)
Q Consensus 78 i~~vp~~ 84 (487)
|++.-.+
T Consensus 78 iitagvg 84 (417)
T 1up7_A 78 IFQFRPG 84 (417)
T ss_dssp EECCCTT
T ss_pred EEcCCCC
Confidence 9998443
No 348
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.42 E-value=0.021 Score=56.66 Aligned_cols=99 Identities=15% Similarity=0.191 Sum_probs=61.3
Q ss_pred cEEEEcc-cHHHHHHHHHHHHCCC-------cEEEEeCChH--HHHHHHHhhhhcC-CC--CccccCCHHHHHhhcCCCc
Q 011394 9 RIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRTTS--KVDETVERAKKEG-DL--PLFGFRDPESFVNSIQKPR 75 (487)
Q Consensus 9 kIgiIGl-G~mG~~lA~~L~~~G~-------~V~v~dr~~~--~~~~l~~~~~~~g-~~--~~~~~~s~~e~~~~l~~ad 75 (487)
||+|+|+ |.+|.+++..|+.... ++.+||.++. +++-......... .. ++...+++.+..++ +|
T Consensus 26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~---ad 102 (345)
T 4h7p_A 26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDG---VA 102 (345)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTT---CS
T ss_pred EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCC---CC
Confidence 8999996 9999999999998653 7999999864 2232221111000 00 23445666666555 99
Q ss_pred EEEEecCC----Chh-----------HHHHHHHHhhcccCCCEEEecCCC
Q 011394 76 VIIMLVKA----GAP-----------VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 76 vIi~~vp~----~~~-----------v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+||++--. +.. ++++.+.+..+..++.+|+-.||.
T Consensus 103 vVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 103 IAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred EEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 99997532 211 223334555555677777777763
No 349
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.41 E-value=0.017 Score=56.62 Aligned_cols=71 Identities=14% Similarity=0.255 Sum_probs=46.1
Q ss_pred CcEEEEcc-cHHHHHHHHHHHHCCC--cEEEEeC--ChHHHHH----HHHhhhhcCCCCccccC---CHHHHHhhcCCCc
Q 011394 8 TRIGLAGL-AVMGQNLALNIAEKGF--PISVYNR--TTSKVDE----TVERAKKEGDLPLFGFR---DPESFVNSIQKPR 75 (487)
Q Consensus 8 ~kIgiIGl-G~mG~~lA~~L~~~G~--~V~v~dr--~~~~~~~----l~~~~~~~g~~~~~~~~---s~~e~~~~l~~ad 75 (487)
|||.|+|+ |.+|.+++..|+..|+ ++.++|+ ++++++. +.+..... +.++.... ++.+..+ ++|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~-~~~~~i~~~~d~l~~al~---gaD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGT-RSDANIYVESDENLRIID---ESD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTS-CCCCEEEEEETTCGGGGT---TCS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhc-CCCeEEEeCCcchHHHhC---CCC
Confidence 58999999 9999999999998885 6889999 7665432 22211100 00122222 1344444 499
Q ss_pred EEEEecC
Q 011394 76 VIIMLVK 82 (487)
Q Consensus 76 vIi~~vp 82 (487)
+||++.-
T Consensus 77 ~Vi~~Ag 83 (313)
T 1hye_A 77 VVIITSG 83 (313)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9999863
No 350
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.36 E-value=0.0087 Score=59.31 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=30.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHC-CCcEEEE-eC--ChHHHHHHH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEK-GFPISVY-NR--TTSKVDETV 47 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~-G~~V~v~-dr--~~~~~~~l~ 47 (487)
+||||+|+|++|+.+++.|.++ +.+|... |+ +++....+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll 47 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMF 47 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhh
Confidence 5999999999999999999886 4566644 53 455555554
No 351
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.34 E-value=0.015 Score=57.62 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=61.2
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCC--c-----EEEEeCCh--HHHHHHHHhhhhcC-CC--CccccCCHHHHHhhcCC
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGF--P-----ISVYNRTT--SKVDETVERAKKEG-DL--PLFGFRDPESFVNSIQK 73 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~--~-----V~v~dr~~--~~~~~l~~~~~~~g-~~--~~~~~~s~~e~~~~l~~ 73 (487)
.+||+|+| +|.+|.+++..|+..|. + +.++|+++ ++++.......... .+ ++...++..+..++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~d--- 79 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKD--- 79 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTT---
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCC---
Confidence 36899999 89999999999998886 5 99999975 34333222111100 00 12334455555554
Q ss_pred CcEEEEecCCC---------------hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 74 PRVIIMLVKAG---------------APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 74 advIi~~vp~~---------------~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+|+||++.-.+ ..++++++.+..+-.++..++..||.
T Consensus 80 aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 99999975221 12334445555554444457777763
No 352
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.33 E-value=0.0065 Score=54.78 Aligned_cols=69 Identities=16% Similarity=0.303 Sum_probs=47.2
Q ss_pred CcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc----cCCHHHHHhhcCCCcEEEEecC
Q 011394 8 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG----FRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 8 ~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~----~~s~~e~~~~l~~advIi~~vp 82 (487)
|+|.|+|. |.+|..+++.|++.|++|++.+|++++.+.+... ++.. ..+.+++.+.++++|+||.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR-------PAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCC-------CSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCC-------ceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 68999986 9999999999999999999999998764321100 1111 1233444343445888887765
Q ss_pred C
Q 011394 83 A 83 (487)
Q Consensus 83 ~ 83 (487)
.
T Consensus 77 ~ 77 (206)
T 1hdo_A 77 T 77 (206)
T ss_dssp C
T ss_pred C
Confidence 3
No 353
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.32 E-value=0.039 Score=53.06 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=78.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCCh
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 403 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~ 403 (487)
.+.++.+|.+.|.+.+..+..++|++.+.++. ++|..++.++.+.|. ..|++++.....+.+.+....
T Consensus 164 ~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~----- 231 (287)
T 3pdu_A 164 VGQGARMKLVVNMIMGQMMTALGEGMALGRNC------GLDGGQLLEVLDAGA-MANPMFKGKGQMLLSGEFPTS----- 231 (287)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHST-TCCHHHHHHHHHHHHTCCCCS-----
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhcc-ccChHHHhhccccccCCCCCC-----
Confidence 37889999999999999999999999998753 499999999999873 578877766555544321111
Q ss_pred hHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011394 404 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 442 (487)
Q Consensus 404 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~ 442 (487)
|. +......++.++..|.+.|+|+|...++...|..
T Consensus 232 -~~--~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 267 (287)
T 3pdu_A 232 -FP--LKHMQKDLRLAVELGDRLGQPLHGAATANESFKR 267 (287)
T ss_dssp -SB--HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred -Cc--HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 11 1223344789999999999999999988776553
No 354
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.25 E-value=0.026 Score=52.45 Aligned_cols=76 Identities=16% Similarity=0.172 Sum_probs=52.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChH-HHHHHHHhhhhcCCCCcccc---CCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS-KVDETVERAKKEGDLPLFGF---RDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~-~~~~l~~~~~~~g~~~~~~~---~s~~e~~~~l~~advIi~~vp~ 83 (487)
++|-|||.|.+|..-+..|.+.|.+|++++++.. .++.+.+.+. +... -..++ |.++|+||.++.+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~------i~~i~~~~~~~d----L~~adLVIaAT~d 101 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQ------LRVKRKKVGEED----LLNVFFIVVATND 101 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTS------CEEECSCCCGGG----SSSCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCC------cEEEECCCCHhH----hCCCCEEEECCCC
Confidence 5899999999999999999999999999987753 3555554431 2221 12222 3449999988766
Q ss_pred ChhHHHHHHHH
Q 011394 84 GAPVDETIKTL 94 (487)
Q Consensus 84 ~~~v~~vl~~l 94 (487)
+ .+...+...
T Consensus 102 ~-~~N~~I~~~ 111 (223)
T 3dfz_A 102 Q-AVNKFVKQH 111 (223)
T ss_dssp T-HHHHHHHHH
T ss_pred H-HHHHHHHHH
Confidence 5 555555433
No 355
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.25 E-value=0.03 Score=53.06 Aligned_cols=123 Identities=13% Similarity=0.226 Sum_probs=64.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh-cCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK-EGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~-~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.+|.|||+|.+|..++.+|+..|. +++++|.+.-....+.++... ....+-.-+....+.+..+ .+++-+...+..-
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~v~~~~~~~ 107 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQL-NPDIQLTALQQRL 107 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEECSCC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHH-CCCCEEEEEeccC
Confidence 589999999999999999999997 888998874222111111000 0000000011111212111 1444455544321
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsg 136 (487)
. .+.+.++ +..-++||+++.. +..-..+.+.+.+.++.++.+.+.|
T Consensus 108 ~-~~~~~~~---~~~~DvVi~~~d~-~~~r~~l~~~~~~~~~p~i~~~~~g 153 (251)
T 1zud_1 108 T-GEALKDA---VARADVVLDCTDN-MATRQEINAACVALNTPLITASAVG 153 (251)
T ss_dssp C-HHHHHHH---HHHCSEEEECCSS-HHHHHHHHHHHHHTTCCEEEEEEEB
T ss_pred C-HHHHHHH---HhcCCEEEECCCC-HHHHHHHHHHHHHhCCCEEEEeccc
Confidence 1 1122222 2244899988753 3333344556667788888765433
No 356
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.22 E-value=0.0025 Score=63.65 Aligned_cols=94 Identities=13% Similarity=0.157 Sum_probs=56.9
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCC-----C-cEEEEe-C-ChHH-HHHHHHhhhhcCCCCcccc-CCHHHHHhhcCCCc
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKG-----F-PISVYN-R-TTSK-VDETVERAKKEGDLPLFGF-RDPESFVNSIQKPR 75 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G-----~-~V~v~d-r-~~~~-~~~l~~~~~~~g~~~~~~~-~s~~e~~~~l~~ad 75 (487)
|+||+|+| .|.+|+.+.+.|.+++ + +|..+. + +..+ +.......... ..+... .+.+++ .. +|
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~--~~~~~~~~~~~~~-~~---~D 82 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPL--AHRVVEPTEAAVL-GG---HD 82 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGG--TTCBCEECCHHHH-TT---CS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccccc--ceeeeccCCHHHh-cC---CC
Confidence 46999999 9999999999999887 3 666664 2 2222 21110000000 011111 233333 33 99
Q ss_pred EEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 76 VIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 76 vIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+||+|+|... ..++...+ ..|..|||.|+..
T Consensus 83 vVf~alg~~~-s~~~~~~~----~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 83 AVFLALPHGH-SAVLAQQL----SPETLIIDCGADF 113 (352)
T ss_dssp EEEECCTTSC-CHHHHHHS----CTTSEEEECSSTT
T ss_pred EEEECCCCcc-hHHHHHHH----hCCCEEEEECCCc
Confidence 9999999874 34443333 5689999999876
No 357
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.18 E-value=0.027 Score=57.12 Aligned_cols=175 Identities=13% Similarity=0.157 Sum_probs=103.2
Q ss_pred CcEEEEcccHHHHHHHHHHHH-CCCcEE-EEeC----------ChHHHHHHHHhhhhcCCC-CccccCCHHHHHhhcCCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAE-KGFPIS-VYNR----------TTSKVDETVERAKKEGDL-PLFGFRDPESFVNSIQKP 74 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~-~G~~V~-v~dr----------~~~~~~~l~~~~~~~g~~-~~~~~~s~~e~~~~l~~a 74 (487)
++|+|.|.|+||...++.|.+ .|..|+ +.|. +++.+.++.++.....++ +.+ ..+.+++... +|
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~-~~~~~eil~~--~~ 286 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGE-RITNEELLEL--DV 286 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSE-EECHHHHTTC--SC
T ss_pred CEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCce-EcCchhhhcC--CC
Confidence 589999999999999999999 999887 5565 677777766542210000 011 1245565432 49
Q ss_pred cEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC--CCCChhhhcCCCccccCCC
Q 011394 75 RVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG--VSGGEEGARHGPSLMPGGS 152 (487)
Q Consensus 75 dvIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p--vsgg~~~a~~G~~i~~gg~ 152 (487)
|+++-|.....-..+ -.+.+ .-++|+..+|... +.+..+.+.++|+.++.-- .+||..
T Consensus 287 DIliP~A~~n~i~~~----~a~~l-~ak~V~EgAN~p~--t~~a~~~l~~~Gi~~~PD~~aNaGGV~------------- 346 (415)
T 2tmg_A 287 DILVPAALEGAIHAG----NAERI-KAKAVVEGANGPT--TPEADEILSRRGILVVPDILANAGGVT------------- 346 (415)
T ss_dssp SEEEECSSTTSBCHH----HHTTC-CCSEEECCSSSCB--CHHHHHHHHHTTCEEECHHHHTCHHHH-------------
T ss_pred cEEEecCCcCccCcc----cHHHc-CCeEEEeCCCccc--CHHHHHHHHHCCCEEEChHHHhCCCce-------------
Confidence 999998765432222 22334 5678888888753 4556677889999877432 222221
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011394 153 FEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVF 226 (487)
Q Consensus 153 ~~~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~ 226 (487)
-..++.+ +..... .+- ..-+...+...+...+.+++..+++.| +++.+...++
T Consensus 347 ~s~~E~v----qN~~~~--------~w~--------~e~v~~~l~~~m~~~~~~v~~~A~~~g-~~~~~aA~~~ 399 (415)
T 2tmg_A 347 VSYFEWV----QDLQSF--------FWD--------LDQVRNALEKMMKGAFNDVMKVKEKYN-VDMRTAAYIL 399 (415)
T ss_dssp HHHHHHH----HHHTTC--------CCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHT-CCHHHHHHHH
T ss_pred EEEEEEE----ecCccc--------cCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHC-cCHHHHHHHH
Confidence 1122222 221110 111 122344445445566778888888888 8877665543
No 358
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=96.17 E-value=0.016 Score=54.82 Aligned_cols=82 Identities=10% Similarity=0.126 Sum_probs=56.2
Q ss_pred CCcEEEE--cccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
|.|..+| |.+-+|..+|+.|++.|++|.+.||++++.+++.+++.. +..+-.=+.+.
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~---------------------~~~~~~Dv~~~ 59 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN---------------------LFYFHGDVADP 59 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTT---------------------EEEEECCTTSH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC---------------------EEEEEecCCCH
Confidence 3455566 588899999999999999999999998877665543210 11111224455
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st 109 (487)
.+++.+++++.....+=+++|+...
T Consensus 60 ~~v~~~v~~~~~~~g~iDiLVNNAG 84 (247)
T 3ged_A 60 LTLKKFVEYAMEKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCC
Confidence 6677777777766666678887654
No 359
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.15 E-value=0.017 Score=58.93 Aligned_cols=114 Identities=12% Similarity=0.142 Sum_probs=74.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEE-EEeC----------ChHHHHHHHHhhhhcCCC-CccccCCHHHHHhhcCCCc
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPIS-VYNR----------TTSKVDETVERAKKEGDL-PLFGFRDPESFVNSIQKPR 75 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~-v~dr----------~~~~~~~l~~~~~~~g~~-~~~~~~s~~e~~~~l~~ad 75 (487)
++|+|.|.|++|...|+.|.+.|..|+ +.|+ +.+.+.++.+......++ ..+ ..+.+++... +||
T Consensus 236 ~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~-~i~~~ei~~~--~~D 312 (440)
T 3aog_A 236 ARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAE-PLPAADFWGL--PVE 312 (440)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSE-ECCHHHHTTC--CCS
T ss_pred CEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCce-EcCchhhhcC--CCc
Confidence 589999999999999999999999888 6666 667776666542210000 011 1245565432 499
Q ss_pred EEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 76 VIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 76 vIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
+++-|.....-.. +-++.+ .-++|+...|.. .+.+..+.+.++|+.|+.
T Consensus 313 IlvPcA~~n~i~~----~na~~l-~ak~VvEgAN~p--~t~eA~~iL~~~GI~~~P 361 (440)
T 3aog_A 313 FLVPAALEKQITE----QNAWRI-RARIVAEGANGP--TTPAADDILLEKGVLVVP 361 (440)
T ss_dssp EEEECSSSSCBCT----TTGGGC-CCSEEECCSSSC--BCHHHHHHHHHHTCEEEC
T ss_pred EEEecCCcCccch----hhHHHc-CCcEEEecCccc--cCHHHHHHHHHCCCEEEC
Confidence 9999876442111 122334 567888888875 345566778889998874
No 360
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=96.14 E-value=0.037 Score=52.52 Aligned_cols=82 Identities=11% Similarity=0.148 Sum_probs=60.2
Q ss_pred cEEEE--cccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 9 kIgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
|+.+| |.+-+|.++|+.|++.|.+|.++||++++++++.++.... . .+++.+ =|.+.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~----------------g---~~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM----------------G---KEVLGVKADVSKK 68 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTSH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc----------------C---CcEEEEEccCCCH
Confidence 57777 5778999999999999999999999999888776643211 0 223322 24556
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st 109 (487)
.+++.+++++.....+=+++|+...
T Consensus 69 ~~v~~~~~~~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 69 KDVEEFVRRTFETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCc
Confidence 6788888887777666688888764
No 361
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.14 E-value=0.012 Score=56.77 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=31.7
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCCh
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 40 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 40 (487)
|++|.|+|. |.+|..++..|++.|++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 578999985 9999999999999999999999987
No 362
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.13 E-value=0.012 Score=57.31 Aligned_cols=73 Identities=21% Similarity=0.288 Sum_probs=46.1
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChH-HHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTS-KVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~-~~~~l~~~~~~~g~~~~~~--~~s~~e~~~~l~~advIi~~vp 82 (487)
++|.|+| .|.+|..++..|++.|++|++.+|+++ +.+.+.+... . +..+.. ..+.+++.+.++.+|+||.+..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-~-~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-L-GAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-T-TCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-C-CCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 4899999 599999999999999999999999875 3332211100 0 000111 1234444444445788777764
No 363
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.12 E-value=0.016 Score=59.60 Aligned_cols=99 Identities=20% Similarity=0.193 Sum_probs=65.8
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC-C---cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG-F---PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G-~---~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
.+||.|||+|.||+.++..++++. + +|++.|++.... +..+... .+++-..|.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-------------------~~~~~~g----~~~~~~~Vd 69 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-------------------DVAQQYG----VSFKLQQIT 69 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-------------------CHHHHHT----CEEEECCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-------------------hHHhhcC----CceeEEecc
Confidence 468999999999999999999874 4 788888765431 1111111 334444443
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCC
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGV 134 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv 134 (487)
+. .+++++. +.+.++++||+.+ .|.....+.+.+.+.|++|+|..+
T Consensus 70 ad-nv~~~l~---aLl~~~DvVIN~s--~~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 70 PQ-NYLEVIG---STLEENDFLIDVS--IGISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp TT-THHHHTG---GGCCTTCEEEECC--SSSCHHHHHHHHHHHTCEEEESSC
T ss_pred ch-hHHHHHH---HHhcCCCEEEECC--ccccCHHHHHHHHHcCCCEEECCC
Confidence 33 3444443 3445569999865 344666778888899999999864
No 364
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.11 E-value=0.017 Score=55.79 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=48.5
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCC-----hHHHHHHHHhhhhcCCCCccc----cCCHHHHHhhcCCCcE
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRT-----TSKVDETVERAKKEGDLPLFG----FRDPESFVNSIQKPRV 76 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~-----~~~~~~l~~~~~~~g~~~~~~----~~s~~e~~~~l~~adv 76 (487)
||+|.|+| .|.+|..++..|++.|++|++.+|+ +++.+.+..... . ++.. ..+.+++.+.++++|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~-~---~~~~~~~D~~d~~~l~~~~~~~d~ 79 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ-L---GAKLIEASLDDHQRLVDALKQVDV 79 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT-T---TCEEECCCSSCHHHHHHHHTTCSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHh-C---CeEEEeCCCCCHHHHHHHHhCCCE
Confidence 67899998 5999999999999999999999998 455444322111 0 1111 1234444444445888
Q ss_pred EEEecCC
Q 011394 77 IIMLVKA 83 (487)
Q Consensus 77 Ii~~vp~ 83 (487)
||.+...
T Consensus 80 vi~~a~~ 86 (313)
T 1qyd_A 80 VISALAG 86 (313)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 8777653
No 365
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=96.02 E-value=0.034 Score=52.55 Aligned_cols=90 Identities=11% Similarity=0.145 Sum_probs=58.0
Q ss_pred CCCCCCCCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE
Q 011394 1 MVEGKQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 1 ~~~~~~~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~ 79 (487)
||..-..+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+-.
T Consensus 2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~ 61 (259)
T 4e6p_A 2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG-----------------PA---AYAVQM 61 (259)
T ss_dssp --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----------------TT---EEEEEC
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----------------CC---ceEEEe
Confidence 44333334566666 7899999999999999999999999988776654321 00 112222
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
=+.+...++.+++++.....+=+++|++...
T Consensus 62 D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 62 DVTRQDSIDAAIAATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHSSSCCEEEECCCC
T ss_pred eCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 2344455666777666665556788877654
No 366
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.02 E-value=0.022 Score=56.55 Aligned_cols=92 Identities=25% Similarity=0.289 Sum_probs=58.9
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCC-cEEEEeCChH---HHHHHHHhhhhcCCCCcccc-CCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGF-PISVYNRTTS---KVDETVERAKKEGDLPLFGF-RDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~-~V~v~dr~~~---~~~~l~~~~~~~g~~~~~~~-~s~~e~~~~l~~advIi~~ 80 (487)
|-|||||| .|..|.-|.+.|.++.. ++....-... ++.++...... .+... .+.+++.++ +|++|+|
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~----~l~~~~~~~~~~~~~---~Dvvf~a 85 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLE----NSILSEFDPEKVSKN---CDVLFTA 85 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCC----CCBCBCCCHHHHHHH---CSEEEEC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhcc----CceEEeCCHHHhhcC---CCEEEEC
Confidence 56899997 89999999999998854 6655542221 22221110101 12221 245666555 9999999
Q ss_pred cCCChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 81 VKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+|.+. .. ++.+.+ .|..|||.|+..
T Consensus 86 lp~~~-s~----~~~~~~-~g~~VIDlSsdf 110 (351)
T 1vkn_A 86 LPAGA-SY----DLVREL-KGVKIIDLGADF 110 (351)
T ss_dssp CSTTH-HH----HHHTTC-CSCEEEESSSTT
T ss_pred CCcHH-HH----HHHHHh-CCCEEEECChhh
Confidence 99873 23 344555 899999999865
No 367
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.98 E-value=0.016 Score=55.93 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=31.4
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCCh
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 40 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 40 (487)
|++|.|+|. |.+|..++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 678999995 9999999999999999999999973
No 368
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.97 E-value=0.027 Score=58.88 Aligned_cols=112 Identities=18% Similarity=0.248 Sum_probs=68.0
Q ss_pred CCcEEEEcccHHHHH-HHHHHHHCCCcEEEEeCChH-HHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cC
Q 011394 7 LTRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTTS-KVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VK 82 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~~-~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~--vp 82 (487)
+++|-|||+|..|.+ +|+.|.+.|++|+++|..+. ..+.+.+.+.. +..-.+++. .. .+|+||.+ +|
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~-----~~~g~~~~~-~~---~~d~vV~Spgi~ 92 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQ-----IYFHHRPEN-VL---DASVVVVSTAIS 92 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCE-----EESSCCGGG-GT---TCSEEEECTTSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCE-----EECCCCHHH-cC---CCCEEEECCCCC
Confidence 468999999999985 99999999999999997654 34455544321 221123332 23 38999886 55
Q ss_pred CCh-hHHHHHH---------HHhhcccCC--CEEEecCCCCchhHHHHHHHHHHcCC
Q 011394 83 AGA-PVDETIK---------TLSAYMEKG--DCIIDGGNEWYENTERREKAMAELGL 127 (487)
Q Consensus 83 ~~~-~v~~vl~---------~l~~~l~~g--~iiId~st~~~~~~~~~~~~l~~~g~ 127 (487)
.+. .+....+ +++..+.+. .+-|-.|++...++.-+...+...|.
T Consensus 93 ~~~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 149 (494)
T 4hv4_A 93 ADNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGL 149 (494)
T ss_dssp TTCHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 432 2222111 222222233 35666667765566556777777774
No 369
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.95 E-value=0.01 Score=59.19 Aligned_cols=97 Identities=10% Similarity=0.132 Sum_probs=55.7
Q ss_pred CCCcEEEEc-ccHHHHHHHHHHHHCC-CcEEEEe-CChHHHHHHHHhhhhc-------CCCCccccC-CHHHHHhhcCCC
Q 011394 6 QLTRIGLAG-LAVMGQNLALNIAEKG-FPISVYN-RTTSKVDETVERAKKE-------GDLPLFGFR-DPESFVNSIQKP 74 (487)
Q Consensus 6 ~~~kIgiIG-lG~mG~~lA~~L~~~G-~~V~v~d-r~~~~~~~l~~~~~~~-------g~~~~~~~~-s~~e~~~~l~~a 74 (487)
+|+||||+| .|.+|..+.+.|.++. ++|.... .+....+.+.+..... +...+...+ +++++ + ++
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~---~v 78 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYEDH-K---DV 78 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGGG-T---TC
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHHh-c---CC
Confidence 357999999 8999999999998764 4776664 2222111121110000 000112211 33443 3 49
Q ss_pred cEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 75 RVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 75 dvIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
|+||+|+|... ..+.... ++..|..|||.|+.
T Consensus 79 DvVf~atp~~~-s~~~a~~---~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 79 DVVLSALPNEL-AESIELE---LVKNGKIVVSNASP 110 (350)
T ss_dssp SEEEECCCHHH-HHHHHHH---HHHTTCEEEECSST
T ss_pred CEEEECCChHH-HHHHHHH---HHHCCCEEEECCcc
Confidence 99999998753 3333333 34568889999875
No 370
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.94 E-value=0.0067 Score=60.71 Aligned_cols=35 Identities=9% Similarity=0.266 Sum_probs=27.2
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHCC----CcEE-EEeCCh
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEKG----FPIS-VYNRTT 40 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~G----~~V~-v~dr~~ 40 (487)
+++||||||+|.||+.++..|.+.. .+|. ++|++.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~ 42 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAER 42 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSB
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECCh
Confidence 3568999999999999999999863 3443 567543
No 371
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.83 E-value=0.042 Score=52.18 Aligned_cols=83 Identities=16% Similarity=0.186 Sum_probs=59.5
Q ss_pred cEEEE--cccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cCCC
Q 011394 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VKAG 84 (487)
Q Consensus 9 kIgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~--vp~~ 84 (487)
|+.+| |.+-+|.++|+.|++.|.+|.+.||+++++++..++....+ .+++.+. +.+.
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-------------------~~~~~~~~Dv~~~ 70 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-------------------YDAHGVAFDVTDE 70 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------------------CCEEECCCCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------------CcEEEEEeeCCCH
Confidence 68888 68889999999999999999999999998877665432210 1222221 3455
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.+++.+++++.....+=+++|+....
T Consensus 71 ~~v~~~~~~~~~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 71 LAIEAAFSKLDAEGIHVDILINNAGI 96 (255)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCC
Confidence 67777888777766666788886543
No 372
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.80 E-value=0.019 Score=58.43 Aligned_cols=114 Identities=15% Similarity=0.156 Sum_probs=67.1
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEE-EEeCCh---------------HHHHHHHHhhhhcCCC-CccccCCHHHHHhh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTT---------------SKVDETVERAKKEGDL-PLFGFRDPESFVNS 70 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~---------------~~~~~l~~~~~~~g~~-~~~~~~s~~e~~~~ 70 (487)
++|+|.|.|++|...|+.|.+.|..|+ +.|.++ +.+.++.+......++ +.+.. +.+++...
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i-~~~~~~~~ 291 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERI-TDEEFWTK 291 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------------
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEe-CccchhcC
Confidence 579999999999999999999999988 668873 5555555432110000 00111 22333321
Q ss_pred cCCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 71 IQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 71 l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
+||+++-|.+...-..+ -.+.+ ..++|+..+|.. .+.+..+.+.++|+.|+.
T Consensus 292 --~~DIliP~A~~n~i~~~----~A~~l-~ak~VvEgAN~P--~t~ea~~il~~~GI~~~P 343 (421)
T 2yfq_A 292 --EYDIIVPAALENVITGE----RAKTI-NAKLVCEAANGP--TTPEGDKVLTERGINLTP 343 (421)
T ss_dssp -----CEEECSCSSCSCHH----HHTTC-CCSEEECCSSSC--SCHHHHHHHHHHTCEEEC
T ss_pred --CccEEEEcCCcCcCCcc----cHHHc-CCeEEEeCCccc--cCHHHHHHHHHCCCEEEC
Confidence 38999998765432222 22334 678888888875 345566778888988774
No 373
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.77 E-value=0.052 Score=53.33 Aligned_cols=73 Identities=15% Similarity=0.228 Sum_probs=46.3
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCCC-------cEEEEeCCh--HHHHHHHHhhhhcC-CC--CccccCCHHHHHhhcCC
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRTT--SKVDETVERAKKEG-DL--PLFGFRDPESFVNSIQK 73 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G~-------~V~v~dr~~--~~~~~l~~~~~~~g-~~--~~~~~~s~~e~~~~l~~ 73 (487)
.|||.|+|. |.+|++++..|++.|+ +|.++|+++ ++.+.......... .+ .+....+..+..+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~--- 80 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKD--- 80 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTT---
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCC---
Confidence 368999996 9999999999999996 899999975 23222111110000 00 12223455555554
Q ss_pred CcEEEEecC
Q 011394 74 PRVIIMLVK 82 (487)
Q Consensus 74 advIi~~vp 82 (487)
+|+||.+..
T Consensus 81 ~D~Vih~Ag 89 (327)
T 1y7t_A 81 ADYALLVGA 89 (327)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999998753
No 374
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.77 E-value=0.026 Score=57.79 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=70.1
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC---cEEEEe----CC----hH-HHHHHH---HhhhhcCCCCc-cccCCHHHHHhhc
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF---PISVYN----RT----TS-KVDETV---ERAKKEGDLPL-FGFRDPESFVNSI 71 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~---~V~v~d----r~----~~-~~~~l~---~~~~~~g~~~~-~~~~s~~e~~~~l 71 (487)
.+|.|+|+|.+|.+++..|.+.|. +|+++| |+ .+ ..+.+. +..... .+. ....++.+.++.
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~--~~~~~~~~~L~e~l~~- 263 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKK--TNGENIEGGPQEALKD- 263 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTT--SCTTCCCSSHHHHHTT-
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhc--cccccccccHHHHhcc-
Confidence 589999999999999999999998 899999 87 32 211121 111100 001 013467777766
Q ss_pred CCCcEEEEecCC--ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011394 72 QKPRVIIMLVKA--GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (487)
Q Consensus 72 ~~advIi~~vp~--~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i 130 (487)
+|+||-++|. +...+ .....+.++.+|+|+++..++... +...+.|...+
T Consensus 264 --aDVlInaT~~~~G~~~~----e~v~~m~~~~iVfDLynP~~t~~~---~~A~~~G~~iv 315 (439)
T 2dvm_A 264 --ADVLISFTRPGPGVIKP----QWIEKMNEDAIVFPLANPVPEILP---EEAKKAGARIV 315 (439)
T ss_dssp --CSEEEECSCCCSSSSCH----HHHTTSCTTCEEEECCSSSCSSCH---HHHHHHTCSEE
T ss_pred --CCEEEEcCCCccCCCCh----HHHHhcCCCCEEEECCCCCCcchH---HHHHHcCCeEE
Confidence 9999999987 42212 233456788899999765543332 33334465554
No 375
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.76 E-value=0.062 Score=52.35 Aligned_cols=43 Identities=14% Similarity=0.268 Sum_probs=36.9
Q ss_pred CCCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011394 6 QLTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (487)
Q Consensus 6 ~~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (487)
+.++|-|.|. |.+|+.++..|++.|++|++.+|++++.+.+.+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~ 53 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK 53 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHH
Confidence 3468999985 999999999999999999999999887665543
No 376
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.74 E-value=0.043 Score=55.70 Aligned_cols=110 Identities=19% Similarity=0.264 Sum_probs=75.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEE-EEeC----------ChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCCc
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPIS-VYNR----------TTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKPR 75 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~-v~dr----------~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~~l~~ad 75 (487)
++|.|.|.|++|...|+.|.+.|..|+ +.|+ +.+.+.++.+.... +.. .-+.+++... +||
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~-----v~~~~~~~~e~~~~--~~D 291 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGS-----LPRLDLAPEEVFGL--EAE 291 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSS-----CSCCCBCTTTGGGS--SCS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCC-----cceeeccchhhhcc--Cce
Confidence 579999999999999999999999988 7788 77777777664321 110 1123344331 499
Q ss_pred EEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 76 VIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 76 vIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
+++-|..... +. ..-.+.+ +=++|+...|.. .+.+..+.+.++|+.|+.
T Consensus 292 VliP~A~~n~-i~---~~~A~~l-~ak~V~EgAN~p--~t~~A~~~L~~~Gi~~~P 340 (419)
T 3aoe_E 292 VLVLAAREGA-LD---GDRARQV-QAQAVVEVANFG--LNPEAEAYLLGKGALVVP 340 (419)
T ss_dssp EEEECSCTTC-BC---HHHHTTC-CCSEEEECSTTC--BCHHHHHHHHHHTCEEEC
T ss_pred EEEecccccc-cc---cchHhhC-CceEEEECCCCc--CCHHHHHHHHHCCCEEEC
Confidence 9999876542 22 1223334 447899988875 335666788899998874
No 377
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.66 E-value=0.027 Score=55.49 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=31.1
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCCCcEEEEeCCh
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 40 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 40 (487)
+|+|.|+|. |.+|+.++..|++.|++|++.+|++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 368999996 9999999999999999999999976
No 378
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.65 E-value=0.016 Score=55.52 Aligned_cols=71 Identities=14% Similarity=0.176 Sum_probs=49.5
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecCC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~--~~s~~e~~~~l~~advIi~~vp~ 83 (487)
|+|.|.| .|.+|+.++..|.+. |++|.+.+|++++...+...+.. +.. ..+.+++.+.++++|+||.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~-----~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVS-----VRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBE-----EEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCE-----EEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 5899998 699999999999998 99999999998875543221110 111 22444455555568888887654
No 379
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=95.65 E-value=0.04 Score=52.83 Aligned_cols=82 Identities=13% Similarity=0.123 Sum_probs=56.5
Q ss_pred cEEEE--cccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 9 kIgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
|+++| |.+-+|..+|+.|++.|.+|.+.+|+++++++..++... . +-.+-.=+.+..+
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~-----------------~---~~~~~~Dv~~~~~ 89 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG-----------------G---AVGIQADSANLAE 89 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT-----------------T---CEEEECCTTCHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-----------------C---eEEEEecCCCHHH
Confidence 68888 567899999999999999999999999988776654211 0 2122222445566
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++++.....+=+++|+....
T Consensus 90 v~~~~~~~~~~~G~iDiLVNNAG~ 113 (273)
T 4fgs_A 90 LDRLYEKVKAEAGRIDVLFVNAGG 113 (273)
T ss_dssp HHHHHHHHHHHHSCEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 777777776655444677765543
No 380
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.64 E-value=0.031 Score=53.26 Aligned_cols=83 Identities=12% Similarity=0.171 Sum_probs=55.9
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 85 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+..
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~Dv~d~~ 66 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA----------------G---GTALAQVLDVTDRH 66 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----------------T---CEEEEEECCTTCHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------C---CcEEEEEcCCCCHH
Confidence 355555 688999999999999999999999998887766543210 0 223322 234445
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=+++|++...
T Consensus 67 ~v~~~~~~~~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 67 SVAAFAQAAVDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 6666666666655555778876544
No 381
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.62 E-value=0.01 Score=63.14 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=70.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCCCh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~--~l~~advIi~~vp~~~ 85 (487)
++|.|+|+|.+|..+|+.|.+.|++|.+.|.++++++++. .. +..-.+-+++.+ .++++|.++.+++++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-~~-------i~gD~t~~~~L~~agi~~ad~vi~~~~~d- 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-VV-------VYGDATVGQTLRQAGIDRASGIIVTTNDD- 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-CE-------EESCSSSSTHHHHHTTTSCSEEEECCSCH-
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-CE-------EEeCCCCHHHHHhcCccccCEEEEECCCc-
Confidence 6899999999999999999999999999999999876543 10 111122222222 356799999999875
Q ss_pred hHHHHHHHHhhcccCC-CEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 86 PVDETIKTLSAYMEKG-DCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
...-.+..++..+.+. .+|.-..+.. . .+.+...|+..+-.|
T Consensus 420 ~~ni~~~~~ak~l~~~~~iiar~~~~~--~----~~~l~~~G~d~vi~p 462 (565)
T 4gx0_A 420 STNIFLTLACRHLHSHIRIVARANGEE--N----VDQLYAAGADFVVSN 462 (565)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEESSTT--S----HHHHHHHTCSEEEEH
T ss_pred hHHHHHHHHHHHHCCCCEEEEEECCHH--H----HHHHHHcCCCEEEcc
Confidence 3232233444555566 4555554432 2 223344576655444
No 382
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.61 E-value=0.01 Score=54.68 Aligned_cols=34 Identities=15% Similarity=0.439 Sum_probs=31.3
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS 41 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~ 41 (487)
.+|.|||+|.-|...|..|+++|++|+++|+.+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 3699999999999999999999999999998753
No 383
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=95.56 E-value=0.039 Score=51.75 Aligned_cols=81 Identities=9% Similarity=0.116 Sum_probs=53.4
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
+|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... ...+..=+.+...+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------------------~~~~~~Dv~~~~~v 62 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN---------------------LFYFHGDVADPLTL 62 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTT---------------------EEEEECCTTSHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc---------------------CCeEEeeCCCHHHH
Confidence 355555 78999999999999999999999998877665532110 11222223444566
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++++.....+=+++|+....
T Consensus 63 ~~~~~~~~~~~g~id~lv~nAg~ 85 (247)
T 3dii_A 63 KKFVEYAMEKLQRIDVLVNNACR 85 (247)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 66676666655555777776643
No 384
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.55 E-value=0.047 Score=54.30 Aligned_cols=97 Identities=13% Similarity=0.220 Sum_probs=55.3
Q ss_pred CCCcEEEEcccHHHHHHHHHHHHC-CCcEEEEeC---ChHHHHHHHHhhhhcCCC----------------Ccccc--CC
Q 011394 6 QLTRIGLAGLAVMGQNLALNIAEK-GFPISVYNR---TTSKVDETVERAKKEGDL----------------PLFGF--RD 63 (487)
Q Consensus 6 ~~~kIgiIGlG~mG~~lA~~L~~~-G~~V~v~dr---~~~~~~~l~~~~~~~g~~----------------~~~~~--~s 63 (487)
.|+||||+|.|++|+.+.+.|.++ .++|...+- +.+....+.+.....|.+ .+... .+
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~d 95 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKD 95 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSC
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCC
Confidence 356999999999999999999987 567776542 333333332211100000 01111 24
Q ss_pred HHHHH---hhcCCCcEEEEecCCChhHHHHHHHHhhcccCCC--EEEecCC
Q 011394 64 PESFV---NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGD--CIIDGGN 109 (487)
Q Consensus 64 ~~e~~---~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~--iiId~st 109 (487)
++++. .. +|+||.|+|.....+ ....++..|. +|||.+.
T Consensus 96 p~~i~w~~~~---vDvV~eatg~~~s~e----~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 96 PAEIPWGASG---AQIVCESTGVFTTEE----KASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GGGCCHHHHT---CCEEEECSSSCCSHH----HHGGGGTTTCSEEEESSCC
T ss_pred hHHCCcccCC---CCEEEECCCchhhHH----HHHHHHHcCCcEEEEeCCC
Confidence 44431 23 889999888764322 2234566676 8888765
No 385
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.53 E-value=0.032 Score=55.43 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=49.2
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHH--HHHHHhhhhcCCCCccc---cCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKV--DETVERAKKEGDLPLFG---FRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~--~~l~~~~~~~g~~~~~~---~~s~~e~~~~l~~advIi~~ 80 (487)
.|+|.|.| .|.+|..+++.|++.|++|.+.+|++++. +.+...... .+.. .++.+++.+.++.+|+||.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v----~~v~~D~l~d~~~l~~~~~~~d~Vi~~ 80 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV----TLFQGPLLNNVPLMDTLFEGAHLAFIN 80 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTE----EEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCc----EEEECCccCCHHHHHHHHhcCCEEEEc
Confidence 46899998 69999999999999999999999987764 333321000 0111 22444444444559999977
Q ss_pred cCC
Q 011394 81 VKA 83 (487)
Q Consensus 81 vp~ 83 (487)
...
T Consensus 81 a~~ 83 (352)
T 1xgk_A 81 TTS 83 (352)
T ss_dssp CCS
T ss_pred CCC
Confidence 643
No 386
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.50 E-value=0.056 Score=56.85 Aligned_cols=113 Identities=11% Similarity=0.063 Sum_probs=68.5
Q ss_pred CCcEEEEcccHHHHH-HHHHHHHCCCcEEEEeCCh--HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--c
Q 011394 7 LTRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTT--SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--V 81 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~--~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~--v 81 (487)
.++|-|||.|-.|.+ +|+.|.+.|++|+++|.+. ...+.|.+.+.. +..-.+++.+... +|+||.+ +
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~-----~~~G~~~~~~~~~---~d~vV~Spgi 90 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVT-----IEEGYLIAHLQPA---PDLVVVGNAM 90 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCE-----EEESCCGGGGCSC---CSEEEECTTC
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCE-----EECCCCHHHcCCC---CCEEEECCCc
Confidence 368999999999986 7999999999999999863 344556554421 2222334443333 8999885 4
Q ss_pred CCCh-hHHHHHH---------HHh-hcc-cCC-CEEEecCCCCchhHHHHHHHHHHcCC
Q 011394 82 KAGA-PVDETIK---------TLS-AYM-EKG-DCIIDGGNEWYENTERREKAMAELGL 127 (487)
Q Consensus 82 p~~~-~v~~vl~---------~l~-~~l-~~g-~iiId~st~~~~~~~~~~~~l~~~g~ 127 (487)
|.+. .+....+ +++ ..+ +.. -+-|-.|++...++.-+...++..|.
T Consensus 91 ~~~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~ 149 (524)
T 3hn7_A 91 KRGMDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGI 149 (524)
T ss_dssp CTTSHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 5432 2322221 222 222 222 35566667765555556677777664
No 387
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.50 E-value=0.11 Score=50.64 Aligned_cols=104 Identities=15% Similarity=0.250 Sum_probs=76.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHhhCCCCCCCcCCh
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 403 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~~~~~~~~~~~ll~~~ 403 (487)
.+.++.+|.+.|.+.++.+..++|++.+.++. ++|..++.++.+.| ...|++++.....+.+.+.. +
T Consensus 184 ~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~d~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~------~ 250 (310)
T 3doj_A 184 VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKS------GLSSDTLLDILDLG-AMTNPMFKGKGPSMNKSSYP------P 250 (310)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TSCHHHHHHHHHHS-TTCCHHHHHHHHHHHTTCCC------C
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhc-ccccHHHHHHhhhhhcCCCC------C
Confidence 37889999999999999999999999998863 39999999999876 34677766544443332211 1
Q ss_pred hHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011394 404 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 442 (487)
Q Consensus 404 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~ 442 (487)
-|. +......++-++..|-+.|+|+|...++...|..
T Consensus 251 ~f~--~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 287 (310)
T 3doj_A 251 AFP--LKHQQKDMRLALALGDENAVSMPVAAAANEAFKK 287 (310)
T ss_dssp SSB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred Ccc--HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 121 1123345688899999999999999988876653
No 388
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.50 E-value=0.046 Score=52.68 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=37.5
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER 49 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~ 49 (487)
+++-|+| .|-+|..++..|++.|++|+++||++++.+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~ 162 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS 162 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHH
Confidence 4688999 99999999999999999999999999888776653
No 389
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.47 E-value=0.0096 Score=59.73 Aligned_cols=34 Identities=24% Similarity=0.609 Sum_probs=31.9
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS 41 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~ 41 (487)
|||.|||.|..|..+|..|+++|++|+++++++.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 7999999999999999999999999999998654
No 390
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=95.46 E-value=0.076 Score=50.18 Aligned_cols=85 Identities=12% Similarity=0.101 Sum_probs=55.9
Q ss_pred cEEEE-ccc---HHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 9 RIGLA-GLA---VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 9 kIgiI-GlG---~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
|+.+| |.+ -+|.++|+.|++.|++|.+.+|+++..+++.+..... .. .++..+-.=|.+.
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~---------------~~-~~~~~~~~Dv~~~ 70 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL---------------NQ-PEAHLYQIDVQSD 70 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG---------------TC-SSCEEEECCTTCH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------------CC-CcEEEEEccCCCH
Confidence 45555 764 4999999999999999999999988877766543211 00 0022222224555
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st 109 (487)
.+++.+++++.....+=+++|+...
T Consensus 71 ~~v~~~~~~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 71 EEVINGFEQIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEeccc
Confidence 6777777777766656677777644
No 391
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.44 E-value=0.066 Score=49.79 Aligned_cols=83 Identities=14% Similarity=0.201 Sum_probs=55.0
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+...
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~D~~~~~~ 63 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----------------NA---VIGIVADLAHHED 63 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----------------GG---EEEEECCTTSHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----------------CC---ceEEECCCCCHHH
Confidence 3466666 6899999999999999999999999988776554321 01 1222222344455
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++.+.....+=+++|+....
T Consensus 64 v~~~~~~~~~~~g~id~lvnnAg~ 87 (235)
T 3l6e_A 64 VDVAFAAAVEWGGLPELVLHCAGT 87 (235)
T ss_dssp HHHHHHHHHHHHCSCSEEEEECCC
T ss_pred HHHHHHHHHHhcCCCcEEEECCCC
Confidence 666666666555455777776554
No 392
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=95.43 E-value=0.06 Score=50.78 Aligned_cols=82 Identities=11% Similarity=0.020 Sum_probs=53.6
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+-.=+.+...+
T Consensus 10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~~~~~v 69 (255)
T 4eso_A 10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-----------------PR---VHALRSDIADLNEI 69 (255)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----------------GG---EEEEECCTTCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----------------Cc---ceEEEccCCCHHHH
Confidence 455555 7899999999999999999999999988776654321 01 11222223444556
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++.+.....+=+++|+....
T Consensus 70 ~~~~~~~~~~~g~id~lv~nAg~ 92 (255)
T 4eso_A 70 AVLGAAAGQTLGAIDLLHINAGV 92 (255)
T ss_dssp HHHHHHHHHHHSSEEEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 66666665555444677776543
No 393
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.40 E-value=0.019 Score=57.55 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=67.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCCh-------HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTT-------SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII 78 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~-------~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi 78 (487)
..||-|+|.|..|.++|+.+...|. +|+++|++- +.+..+.+.....-. ......+++|+++. +|++|
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~-~~~~~~~L~eav~~---ADV~I 263 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN-REFKSGTLEDALEG---ADIFI 263 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHS-CTTCCCSCSHHHHT---TCSEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccC-cccchhhHHHHhcc---CCEEE
Confidence 3589999999999999999999999 999999872 222222211110000 01124578999987 99887
Q ss_pred EecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhH
Q 011394 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENT 115 (487)
Q Consensus 79 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~ 115 (487)
=+..++... +++...+.++.+|+++||..|+.+
T Consensus 264 G~Sapgl~T----~EmVk~Ma~~pIIfalsNPt~E~~ 296 (398)
T 2a9f_A 264 GVSAPGVLK----AEWISKMAARPVIFAMANPIPEIY 296 (398)
T ss_dssp ECCSTTCCC----HHHHHTSCSSCEEEECCSSSCSSC
T ss_pred ecCCCCCCC----HHHHHhhCCCCEEEECCCCCccCC
Confidence 665433323 344555779999999999876544
No 394
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.37 E-value=0.011 Score=57.39 Aligned_cols=69 Identities=14% Similarity=0.208 Sum_probs=44.0
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
+|+|.|.| .|.+|+.++..|++.|++|++.+|++...+ +. .... +..--+.+++.+.++++|+||-+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-~~~~-----~~~Dl~~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN-DYEY-----RVSDYTLEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------CCEE-----EECCCCHHHHHHHTTTCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC-ceEE-----EEccccHHHHHHhhcCCCEEEEccc
Confidence 47899998 799999999999999999999999955443 22 1100 0111113333333445888887764
No 395
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=95.30 E-value=0.035 Score=58.39 Aligned_cols=125 Identities=8% Similarity=0.083 Sum_probs=74.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhc-CCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKE-GDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~-g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.+|.|||+|..|..++.+|+..|. +++++|.+.=....+.++.-.. ...+-.-+....+.++.+ .+++-+.+.+.
T Consensus 33 ~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~l-Np~v~v~~~~~-- 109 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQEL-NSDVSGSFVEE-- 109 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTT-CTTSBCCEESS--
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHh-CCCCeEEEeCC--
Confidence 589999999999999999999998 8999998765444554432100 000001111222333332 24555555544
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsg 136 (487)
.+...++.....+..-++||+++- .+..-..+.+.+...++.++.+.+.|
T Consensus 110 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~ln~~c~~~~iplI~~~~~G 159 (531)
T 1tt5_A 110 SPENLLDNDPSFFCRFTVVVATQL-PESTSLRLADVLWNSQIPLLICRTYG 159 (531)
T ss_dssp CHHHHHHSCGGGGGGCSEEEEESC-CHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred CcchhhhhhHHHhcCCCEEEEeCC-CHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 244433323344556689999854 33444445666777888888876554
No 396
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=95.28 E-value=0.079 Score=50.70 Aligned_cols=82 Identities=11% Similarity=0.124 Sum_probs=54.4
Q ss_pred cEEEE--cccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 9 kIgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
|+.+| |.|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+-.=+.+...
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~d~~~ 89 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG-----------------CG---AAACRVDVSDEQQ 89 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-----------------SS---CEEEECCTTCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-----------------Cc---ceEEEecCCCHHH
Confidence 45555 47899999999999999999999999988776654321 00 2222222344455
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++.+.....+=+++|++...
T Consensus 90 v~~~~~~~~~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 90 IIAMVDACVAAFGGVDKLVANAGV 113 (277)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 666666666555555777776544
No 397
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.27 E-value=0.05 Score=54.48 Aligned_cols=92 Identities=17% Similarity=0.235 Sum_probs=52.9
Q ss_pred CCcEEEEc-ccHHHHHHHH-HHHHCCC---cEEEEeC-ChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAG-LAVMGQNLAL-NIAEKGF---PISVYNR-TTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~-~L~~~G~---~V~v~dr-~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~ 80 (487)
|+||||+| .|.+|+.+.+ .|.++++ .+..+.. +..+ .+...... ...+....+++++ +. +|+||.|
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--~v~~~~g~--~i~~~~~~~~~~~-~~---~DvVf~a 72 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAPSFGGT--TGTLQDAFDLEAL-KA---LDIIVTC 72 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCCGGGTC--CCBCEETTCHHHH-HT---CSEEEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--CccccCCC--ceEEEecCChHHh-cC---CCEEEEC
Confidence 56999999 9999999999 5655654 3444433 2211 11000000 0011222245554 44 9999999
Q ss_pred cCCChhHHHHHHHHhhcccCCC--EEEecCCC
Q 011394 81 VKAGAPVDETIKTLSAYMEKGD--CIIDGGNE 110 (487)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~--iiId~st~ 110 (487)
+|.. ...+....+. ..|. +|||.|+.
T Consensus 73 ~g~~-~s~~~a~~~~---~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 73 QGGD-YTNEIYPKLR---ESGWQGYWIDAASS 100 (367)
T ss_dssp SCHH-HHHHHHHHHH---HTTCCCEEEECSST
T ss_pred CCch-hHHHHHHHHH---HCCCCEEEEcCChh
Confidence 9865 3344444333 4564 99999876
No 398
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=95.26 E-value=0.06 Score=53.91 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=58.2
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCC--c---EEEEeCChH----HHHHHHHhhhhcC-CC--CccccCCHHHHHhhcCC
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGF--P---ISVYNRTTS----KVDETVERAKKEG-DL--PLFGFRDPESFVNSIQK 73 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~--~---V~v~dr~~~----~~~~l~~~~~~~g-~~--~~~~~~s~~e~~~~l~~ 73 (487)
.+||+||| +|.+|.+++..|+..+. + |.++|.+.+ +++-......... .+ ++...++..+..++
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~d--- 108 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFED--- 108 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTT---
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCC---
Confidence 35899999 79999999999998875 2 777654433 2332222111100 00 23344445555454
Q ss_pred CcEEEEecCCC----hh-----------HHHHHHHHhhcccCCCEEEecCCC
Q 011394 74 PRVIIMLVKAG----AP-----------VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 74 advIi~~vp~~----~~-----------v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+|+||++.-.+ .. ++.+...+..+..++.+|+..||.
T Consensus 109 aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP 160 (375)
T 7mdh_A 109 VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP 160 (375)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 99999975322 11 222223454544577788888863
No 399
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.26 E-value=0.016 Score=56.77 Aligned_cols=72 Identities=13% Similarity=0.182 Sum_probs=46.9
Q ss_pred CCCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecC
Q 011394 6 QLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 6 ~~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~--~~s~~e~~~~l~~advIi~~vp 82 (487)
.+|+|-|.| .|.+|..++..|++.|++|++.+|++++.+.+..... .+.. ..+.+++.+.++.+|+||.+..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~-----~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEP-----ECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCC-----EEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCe-----EEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 356899998 6999999999999999999999998776543321110 0010 1233444443445888877754
No 400
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=95.22 E-value=0.085 Score=50.16 Aligned_cols=81 Identities=11% Similarity=0.189 Sum_probs=53.2
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
+|-|.| .|-+|..+++.|++.|++|.+.+|++++.+++.+... . ...+..=+.+...+
T Consensus 11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------------------~---~~~~~~Dv~d~~~v 69 (270)
T 1yde_A 11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP------------------G---AVFILCDVTQEDDV 69 (270)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT------------------T---EEEEECCTTSHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------------------C---CeEEEcCCCCHHHH
Confidence 455555 7899999999999999999999999887766543210 0 11222223344456
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++++.....+=+++|++...
T Consensus 70 ~~~~~~~~~~~g~iD~lv~nAg~ 92 (270)
T 1yde_A 70 KTLVSETIRRFGRLDCVVNNAGH 92 (270)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 66666665555455778776643
No 401
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.21 E-value=0.043 Score=52.13 Aligned_cols=69 Identities=12% Similarity=0.253 Sum_probs=47.8
Q ss_pred cEEEEcc-cHHHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecC
Q 011394 9 RIGLAGL-AVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 9 kIgiIGl-G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~--~~s~~e~~~~l~~advIi~~vp 82 (487)
+|-|.|. |.+|..++..|++. |++|++.+|++++.+.+...+.. +.. ..+.+++.+.++++|+||.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGIT-----VRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCE-----EEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCe-----EEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4788985 99999999999998 99999999998876655432210 111 1244444444556898888764
No 402
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=95.21 E-value=0.11 Score=48.64 Aligned_cols=82 Identities=13% Similarity=0.226 Sum_probs=56.0
Q ss_pred cEEEE-c-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 9 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 9 kIgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
|+.+| | .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... . ...+-.=+.+...
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~---~~~~~~Dv~d~~~ 69 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----------------N---GKGMALNVTNPES 69 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----------------G---EEEEECCTTCHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----------------c---ceEEEEeCCCHHH
Confidence 45555 5 78999999999999999999999999887766543211 0 1122222445556
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++++.....+=+++|+....
T Consensus 70 v~~~~~~~~~~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 70 IEAVLKAITDEFGGVDILVNNAGI 93 (248)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 777777776665556788887654
No 403
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.19 E-value=0.057 Score=53.19 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=35.9
Q ss_pred CCCCCCCCcEEEEcccHHHHHHHHHHHHCCCcEEE-EeC--ChHHHHHHHHh
Q 011394 1 MVEGKQLTRIGLAGLAVMGQNLALNIAEKGFPISV-YNR--TTSKVDETVER 49 (487)
Q Consensus 1 ~~~~~~~~kIgiIGlG~mG~~lA~~L~~~G~~V~v-~dr--~~~~~~~l~~~ 49 (487)
|++-..+.||||.|.|++|+.+++.+...|.+|.. .|+ +.+.+..+.+.
T Consensus 1 ~~~~~~~~kvgInGFGRIGrlv~R~~~~~~veivainDp~~d~~~~a~l~~y 52 (346)
T 3h9e_O 1 MVSVARELTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKY 52 (346)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHC
T ss_pred CcccCCeeEEEEECCChHHHHHHHHHHhCCCEEEEEeCCCCChhHhcccccc
Confidence 67777889999999999999999999888888776 564 56666666653
No 404
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.19 E-value=0.079 Score=50.67 Aligned_cols=83 Identities=13% Similarity=0.153 Sum_probs=56.2
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 85 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+..
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~Dv~d~~ 86 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA----------------G---HDVDGSSCDVTSTD 86 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------T---CCEEEEECCTTCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEECCCCCHH
Confidence 344555 789999999999999999999999998877765533210 0 223322 244455
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=+++|+....
T Consensus 87 ~v~~~~~~~~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 87 EVHAAVAAAVERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHHHHHHHHHHCSCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCC
Confidence 6677777666655555788877654
No 405
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=95.18 E-value=0.11 Score=49.01 Aligned_cols=83 Identities=10% Similarity=0.081 Sum_probs=54.6
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
++|-|.| .|-+|..+++.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+...
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~D~~~~~~ 67 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----------------DA---ARYVHLDVTQPAQ 67 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----------------GG---EEEEECCTTCHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----------------cC---ceEEEecCCCHHH
Confidence 3466666 7899999999999999999999999887766543211 01 1122222344455
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++.+.....+=+++|+....
T Consensus 68 v~~~~~~~~~~~g~iD~lv~~Ag~ 91 (260)
T 1nff_A 68 WKAAVDTAVTAFGGLHVLVNNAGI 91 (260)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 666666666555455778776653
No 406
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.17 E-value=0.064 Score=52.20 Aligned_cols=101 Identities=10% Similarity=0.094 Sum_probs=70.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCc-cchhhHHHHHHHHhhCCCCCCCcCCh
Q 011394 325 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCI-IRAVFLDRIKKAYDRNADLANLLVDP 403 (487)
Q Consensus 325 ~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gci-i~s~ll~~~~~~~~~~~~~~~ll~~~ 403 (487)
++++.+| .+.++.+..++|++.+.++ .++|..++.++++.+.. .+|++++.....+.++.....
T Consensus 174 g~g~~~k----~~~~~~~~~~~Ea~~la~~------~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~----- 238 (306)
T 3l6d_A 174 AFATVLH----AHAFAAMVTFFEAVGAGDR------FGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGD----- 238 (306)
T ss_dssp HHHHHHH----HHHHHHHHHHHHHHHHHHH------TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTT-----
T ss_pred cHHHHHH----HHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCC-----
Confidence 4556666 6778899999999999875 34999999999987632 578888776555444321110
Q ss_pred hHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011394 404 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 442 (487)
Q Consensus 404 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~~ 442 (487)
.|. +.-....++.++..|.+.|+|+|.+.++...|..
T Consensus 239 ~~~--~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 275 (306)
T 3l6d_A 239 QAR--LDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQR 275 (306)
T ss_dssp SSB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred ccc--HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 011 1112345688999999999999999998876654
No 407
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.17 E-value=0.034 Score=51.62 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=35.7
Q ss_pred CCCcEEEEc-ccHHHHHHHHHHHHC--CCcEEEEeCChHHHHHH
Q 011394 6 QLTRIGLAG-LAVMGQNLALNIAEK--GFPISVYNRTTSKVDET 46 (487)
Q Consensus 6 ~~~kIgiIG-lG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l 46 (487)
++++|-|.| .|.+|..+++.|++. |++|++.+|++++.+.+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~ 46 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI 46 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc
Confidence 457899998 799999999999999 89999999998876544
No 408
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.14 E-value=0.09 Score=55.73 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=61.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh-hhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER-AKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKA 83 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-~~~~g~~~~~~~~s~~e~~~--~l~~advIi~~vp~ 83 (487)
.++|-|+|.|.+|..++..|.+.|++|++.|.++++++.+.+. +... +....+.++..+ .++++|.+++ .++
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~----i~Gd~~~~~~L~~a~i~~a~~vi~-t~~ 201 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKV----VYGSPTDAHVLAGLRVAAARSIIA-NLS 201 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEE----EESCTTCHHHHHHTTGGGCSEEEE-CSC
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeE----EEeCCCCHHHHHhcCcccCCEEEE-eCC
Confidence 3579999999999999999999999999999999999888765 3210 122222223322 2456999987 444
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecC
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGG 108 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~s 108 (487)
+ .....+-..+..+..-.++.-..
T Consensus 202 D-~~n~~~~~~ar~~~~~~iiar~~ 225 (565)
T 4gx0_A 202 D-PDNANLCLTVRSLCQTPIIAVVK 225 (565)
T ss_dssp H-HHHHHHHHHHHTTCCCCEEEECS
T ss_pred c-HHHHHHHHHHHHhcCceEEEEEC
Confidence 3 22222222333344445555443
No 409
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=95.14 E-value=0.11 Score=48.75 Aligned_cols=86 Identities=13% Similarity=0.221 Sum_probs=56.9
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec--CCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV--KAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v--p~~~ 85 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... ... ..+.++..-+ .+..
T Consensus 14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~--~~~~~~~~D~~~~~~~ 77 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE--------------ETG--RQPQWFILDLLTCTSE 77 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------HHS--CCCEEEECCTTTCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------------hcC--CCceEEEEecccCCHH
Confidence 344555 68999999999999999999999999887776543211 011 0133333333 4445
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=+++|+....
T Consensus 78 ~~~~~~~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 78 NCQQLAQRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHHHHHHHHCSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcc
Confidence 6677777776665556788887654
No 410
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.12 E-value=0.059 Score=55.30 Aligned_cols=113 Identities=12% Similarity=0.073 Sum_probs=66.4
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHH--HHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec--CC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKV--DETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV--KA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~--~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v--p~ 83 (487)
++|.|||+|..|.+.|+.|.+.|++|+++|...... ..+. .+. ++..-....+.++. +|.||++- |.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~-----~~~~g~~~~~~~~~---~d~vV~s~gi~~ 76 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAV-----ERHTGSLNDEWLMA---ADLIVASPGIAL 76 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTS-----CEEESSCCHHHHHT---CSEEEECTTSCT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCC-----EEEECCCcHHHhcc---CCEEEeCCCCCC
Confidence 589999999999999999999999999999764321 1222 221 12211212444444 89888873 32
Q ss_pred C-hhHHHHH----------HHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeE
Q 011394 84 G-APVDETI----------KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLY 129 (487)
Q Consensus 84 ~-~~v~~vl----------~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~ 129 (487)
. ..+.... +-+...++...|-|-.|++...++.-+...+...|...
T Consensus 77 ~~p~~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g~~~ 133 (439)
T 2x5o_A 77 AHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNV 133 (439)
T ss_dssp TCHHHHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCE
Confidence 2 1222211 11112233334556666676555655667777777544
No 411
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.10 E-value=0.019 Score=57.38 Aligned_cols=92 Identities=12% Similarity=0.200 Sum_probs=55.8
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCC-cEEEE-eCCh--HHHHHHHH---------hhhhcCCCCcccc-CCHHHHHhhc
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGF-PISVY-NRTT--SKVDETVE---------RAKKEGDLPLFGF-RDPESFVNSI 71 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~-~V~v~-dr~~--~~~~~l~~---------~~~~~g~~~~~~~-~s~~e~~~~l 71 (487)
++|||||| .|+.|.-|.+.|.++-+ ++... .++. .++..... ... ..... .+.+++ +
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~-----~~~v~~~~~~~~-~-- 78 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIA-----DMEIKPTDPKLM-D-- 78 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHH-----TCBCEECCGGGC-T--
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccc-----cceEEeCCHHHh-c--
Confidence 45899999 79999999998887643 55544 3332 12222100 000 01111 133332 3
Q ss_pred CCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 72 QKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 72 ~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
++|+||+|+|.+. ..+....+ +..|..|||.|+-.
T Consensus 79 -~vDvvf~a~p~~~-s~~~a~~~---~~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 79 -DVDIIFSPLPQGA-AGPVEEQF---AKEGFPVISNSPDH 113 (359)
T ss_dssp -TCCEEEECCCTTT-HHHHHHHH---HHTTCEEEECSSTT
T ss_pred -CCCEEEECCChHH-HHHHHHHH---HHCCCEEEEcCCCc
Confidence 4999999999874 34444433 45789999999864
No 412
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.10 E-value=0.019 Score=57.38 Aligned_cols=92 Identities=12% Similarity=0.200 Sum_probs=55.8
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCC-cEEEE-eCCh--HHHHHHHH---------hhhhcCCCCcccc-CCHHHHHhhc
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGF-PISVY-NRTT--SKVDETVE---------RAKKEGDLPLFGF-RDPESFVNSI 71 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~-~V~v~-dr~~--~~~~~l~~---------~~~~~g~~~~~~~-~s~~e~~~~l 71 (487)
++|||||| .|+.|.-|.+.|.++-+ ++... .++. .++..... ... ..... .+.+++ +
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~-----~~~v~~~~~~~~-~-- 78 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIA-----DMEIKPTDPKLM-D-- 78 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHH-----TCBCEECCGGGC-T--
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccc-----cceEEeCCHHHh-c--
Confidence 45899999 79999999998887643 55544 3332 12222100 000 01111 133332 3
Q ss_pred CCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 72 QKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 72 ~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
++|+||+|+|.+. ..+....+ +..|..|||.|+-.
T Consensus 79 -~vDvvf~a~p~~~-s~~~a~~~---~~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 79 -DVDIIFSPLPQGA-AGPVEEQF---AKEGFPVISNSPDH 113 (359)
T ss_dssp -TCCEEEECCCTTT-HHHHHHHH---HHTTCEEEECSSTT
T ss_pred -CCCEEEECCChHH-HHHHHHHH---HHCCCEEEEcCCCc
Confidence 4999999999874 34444433 45789999999864
No 413
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=95.09 E-value=0.06 Score=49.69 Aligned_cols=42 Identities=21% Similarity=0.288 Sum_probs=34.9
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (487)
|++|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN 43 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 34566776 7899999999999999999999999998877664
No 414
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=95.09 E-value=0.11 Score=50.16 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=56.5
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE--EecCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII--MLVKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi--~~vp~~~ 85 (487)
+|-|.| .|-+|..+|+.|++.|++|++.+|++++.+++.+..... . .++.+ .=+.+..
T Consensus 33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~Dv~d~~ 93 (301)
T 3tjr_A 33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ----------------G---FDAHGVVCDVRHLD 93 (301)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------C---CceEEEEccCCCHH
Confidence 466666 688999999999999999999999999887766533210 1 22322 2344445
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=+++|++...
T Consensus 94 ~v~~~~~~~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 94 EMVRLADEAFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCc
Confidence 6666776666555455788877654
No 415
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.08 E-value=0.08 Score=52.73 Aligned_cols=125 Identities=10% Similarity=0.087 Sum_probs=68.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh-cCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK-EGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~-~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
..+|.|||+|..|..++.+|+..|. +++++|.+.-....+.++... ....+-.-+....+.+..+ .+++-+...+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~v~~~~~~ 196 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKR-NSEISVSEIALN 196 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHH-CCCCeEEEeecc
Confidence 3589999999999999999999997 899999875322222211100 0000000011122222211 145555554432
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvsg 136 (487)
-.-.. .+.. +..-++|||++-........+.+.+.+.++.++.+.+.|
T Consensus 197 i~~~~---~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g 244 (353)
T 3h5n_A 197 INDYT---DLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVN 244 (353)
T ss_dssp CCSGG---GGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred cCchh---hhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 10000 1223 567789999875443233445566778888888775543
No 416
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=95.03 E-value=0.025 Score=56.94 Aligned_cols=94 Identities=15% Similarity=0.249 Sum_probs=54.8
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCC-cEE-EEe-C-ChH-HHHHHHHh--------hhhcCCCCcccc-CCHHHHHhhc
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGF-PIS-VYN-R-TTS-KVDETVER--------AKKEGDLPLFGF-RDPESFVNSI 71 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~-~V~-v~d-r-~~~-~~~~l~~~--------~~~~g~~~~~~~-~s~~e~~~~l 71 (487)
++|||||| .|..|.-|.+.|.++-+ ++. ++. + +.. ++.+.... +.. ..... .+.++..++
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~----~~~v~~~~~~~~~~~- 93 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQ----DIVVQECKPEGNFLE- 93 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHH----TCBCEESSSCTTGGG-
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccc----cceEEeCchhhhccc-
Confidence 35799999 79999999998888753 664 442 2 222 12221100 000 01111 112212334
Q ss_pred CCCcEEEEecCCChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 72 QKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 72 ~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+|+||+|+|.+ ...+....+ +..|..|||.|+..
T Consensus 94 --~Dvvf~alp~~-~s~~~~~~~---~~~G~~VIDlSa~f 127 (381)
T 3hsk_A 94 --CDVVFSGLDAD-VAGDIEKSF---VEAGLAVVSNAKNY 127 (381)
T ss_dssp --CSEEEECCCHH-HHHHHHHHH---HHTTCEEEECCSTT
T ss_pred --CCEEEECCChh-HHHHHHHHH---HhCCCEEEEcCCcc
Confidence 99999999976 344444444 45789999999864
No 417
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=95.02 E-value=0.087 Score=48.74 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=60.8
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE-EecCC
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII-MLVKA 83 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi-~~vp~ 83 (487)
.||.+|+|+ |.||+.++....+.|+++. .+|+..+ . ++ +. +|++| .+.|+
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~~----------~----------~l----~~---~DVvIDFT~P~ 64 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV----------E----------EL----DS---PDVVIDFSSPE 64 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE----------E----------EC----SC---CSEEEECSCGG
T ss_pred cceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCCc----------c----------cc----cC---CCEEEECCCHH
Confidence 479999997 9999999887777788765 4576431 0 01 12 89988 55554
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCC
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVS 135 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pvs 135 (487)
.+...++... ..|.-+|..+|+....-.+..+.+.++ +..+-+|.+
T Consensus 65 --a~~~~~~~~~---~~g~~~ViGTTG~~~~~~~~l~~~a~~-~~vv~apNf 110 (228)
T 1vm6_A 65 --ALPKTVDLCK---KYRAGLVLGTTALKEEHLQMLRELSKE-VPVVQAYNF 110 (228)
T ss_dssp --GHHHHHHHHH---HHTCEEEECCCSCCHHHHHHHHHHTTT-SEEEECSCC
T ss_pred --HHHHHHHHHH---HcCCCEEEeCCCCCHHHHHHHHHHHhh-CCEEEeccc
Confidence 4555554433 457778888888755443344444333 555555543
No 418
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=95.02 E-value=0.077 Score=49.90 Aligned_cols=83 Identities=12% Similarity=0.213 Sum_probs=54.3
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 85 (487)
++-|.| .|-+|..+++.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~~ 64 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA----------------G---GHAVAVKVDVSDRD 64 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTSHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEecCCCHH
Confidence 355555 789999999999999999999999988776655432110 0 222222 234444
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++++.....+=+++|+....
T Consensus 65 ~v~~~~~~~~~~~g~id~lv~nAg~ 89 (256)
T 1geg_A 65 QVFAAVEQARKTLGGFDVIVNNAGV 89 (256)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCC
Confidence 5666666666555455778876643
No 419
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=95.02 E-value=0.11 Score=48.88 Aligned_cols=84 Identities=15% Similarity=0.186 Sum_probs=55.6
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
+++-|.| .|-+|..+++.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~ 68 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK----------------G---VEARSYVCDVTSE 68 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------T---SCEEEEECCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEecCCCH
Confidence 3565665 789999999999999999999999988776655432110 0 222222 23444
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++.+.....+=+++|+....
T Consensus 69 ~~~~~~~~~~~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 69 EAVIGTVDSVVRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 55666666666555455788877654
No 420
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.00 E-value=0.071 Score=50.36 Aligned_cols=84 Identities=14% Similarity=0.145 Sum_probs=57.5
Q ss_pred cEEEEcc-cH-HHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 9 RIGLAGL-AV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 9 kIgiIGl-G~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
++-|.|. |. +|..+|+.|++.|++|++.+|+.++.+++.+..... ...++.++ =+.+.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------------~~~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL------------------GLGRVEAVVCDVTST 85 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------------------CSSCEEEEECCTTCH
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc------------------CCCceEEEEeCCCCH
Confidence 5777787 84 999999999999999999999998877765543210 00223332 24445
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++.+.....+=+++|+....
T Consensus 86 ~~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 86 EAVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 56777777766655555788877654
No 421
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=95.00 E-value=0.12 Score=48.64 Aligned_cols=85 Identities=18% Similarity=0.265 Sum_probs=56.4
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... -.. ...+-.=+.+...+
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~---~~~~~~Dv~~~~~v 70 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--------------PGQ---ILTVQMDVRNTDDI 70 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--------------TTC---EEEEECCTTCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCc---EEEEEccCCCHHHH
Confidence 344445 689999999999999999999999999887766543210 000 12222224445567
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++.+.....+=+++|++...
T Consensus 71 ~~~~~~~~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 71 QKMIEQIDEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 77777776655556788877653
No 422
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.00 E-value=0.0086 Score=59.97 Aligned_cols=90 Identities=9% Similarity=0.149 Sum_probs=53.4
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCc---EEEEe-C-ChHHHHHHHHhhhhcCCCCcccc-CCHHHHHhhcCCCcEEEE
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFP---ISVYN-R-TTSKVDETVERAKKEGDLPLFGF-RDPESFVNSIQKPRVIIM 79 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~---V~v~d-r-~~~~~~~l~~~~~~~g~~~~~~~-~s~~e~~~~l~~advIi~ 79 (487)
++||+||| .|..|.-|.+.|.+++|. +.... + +..+.-.+ .+. ..... .+.++ ++++|+||+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~--~~~-----~~~~~~~~~~~----~~~~Dvvf~ 70 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF--KDQ-----DITIEETTETA----FEGVDIALF 70 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEE--TTE-----EEEEEECCTTT----TTTCSEEEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCccee--cCC-----CceEeeCCHHH----hcCCCEEEE
Confidence 46999999 999999999999998773 33333 2 21110000 000 01111 12222 234999999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
|+|.. ...+....+ +..|..|||.|+..
T Consensus 71 a~~~~-~s~~~a~~~---~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 71 SAGSS-TSAKYAPYA---VKAGVVVVDNTSYF 98 (366)
T ss_dssp CSCHH-HHHHHHHHH---HHTTCEEEECSSTT
T ss_pred CCChH-hHHHHHHHH---HHCCCEEEEcCCcc
Confidence 99865 333333333 45788999999864
No 423
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=94.97 E-value=0.13 Score=48.29 Aligned_cols=93 Identities=10% Similarity=0.109 Sum_probs=54.8
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
++|-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+..... ...+.... .+..++..=+.+...
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~D~~~~~~ 77 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGP---------GSKEGPPR-GNHAAFQADVSEARA 77 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC----------------------CCEEEECCTTSHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---------CccccccC-cceEEEEecCCCHHH
Confidence 4566665 799999999999999999999999998877665432110 00000000 002222222344445
Q ss_pred HHHHHHHHhhcccCC-CEEEecCCC
Q 011394 87 VDETIKTLSAYMEKG-DCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g-~iiId~st~ 110 (487)
++.+++.+.....+= ++||++...
T Consensus 78 ~~~~~~~~~~~~g~i~d~vi~~Ag~ 102 (264)
T 2pd6_A 78 ARCLLEQVQACFSRPPSVVVSCAGI 102 (264)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCc
Confidence 666666665544443 778887654
No 424
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=94.97 E-value=0.13 Score=47.34 Aligned_cols=40 Identities=15% Similarity=0.320 Sum_probs=33.8
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (487)
+|-|.| .|.+|..+++.|++.|++|++.+|++++.+++.+
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 47 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAA 47 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 466665 8999999999999999999999999887766543
No 425
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=94.96 E-value=0.097 Score=49.80 Aligned_cols=85 Identities=13% Similarity=0.162 Sum_probs=57.8
Q ss_pred cEEEE--cccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 9 kIgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
|+.+| |.|-+|..+|+.|++.|++|++.+|++++.+++.+.... .-.. ...+..=+.+...
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~---~~~~~~Dv~d~~~ 91 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ--------------AGLE---GRGAVLNVNDATA 91 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH--------------HTCC---CEEEECCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------------cCCc---EEEEEEeCCCHHH
Confidence 55566 578999999999999999999999999887766543221 0011 2333333455556
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++++.....+=+++|+....
T Consensus 92 v~~~~~~~~~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 92 VDALVESTLKEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 777777766655556788877654
No 426
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=94.95 E-value=0.062 Score=50.49 Aligned_cols=91 Identities=18% Similarity=0.222 Sum_probs=55.6
Q ss_pred CCCCCCCCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeC-ChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE
Q 011394 1 MVEGKQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNR-TTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII 78 (487)
Q Consensus 1 ~~~~~~~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi 78 (487)
|++.-..++|-|.| .|-+|..+++.|++.|++|++.+| ++++.+++.+.... .. .++.+
T Consensus 1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~----------------~~---~~~~~ 61 (261)
T 1gee_A 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK----------------VG---GEAIA 61 (261)
T ss_dssp CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----------------TT---CEEEE
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh----------------cC---CceEE
Confidence 54433334566665 899999999999999999999999 77766655433210 00 22222
Q ss_pred Ee--cCCChhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 79 ML--VKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 79 ~~--vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+. +.+...++.+++.+.....+=++||++...
T Consensus 62 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 95 (261)
T 1gee_A 62 VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL 95 (261)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 22 333345555565555544444777776543
No 427
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=94.93 E-value=0.12 Score=49.26 Aligned_cols=82 Identities=13% Similarity=0.236 Sum_probs=56.2
Q ss_pred cEEEE--cccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 9 kIgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
|+.+| |.|-+|..+|+.|++.|++|.+.+|+.++.+++.+... .. ...+-.=+.+...
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~d~~~ 88 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-----------------DD---ALCVPTDVTDPDS 88 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT-----------------SC---CEEEECCTTSHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-----------------CC---eEEEEecCCCHHH
Confidence 56666 47899999999999999999999999988776654321 11 2223223444556
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++.+.....+=+++|++...
T Consensus 89 v~~~~~~~~~~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 89 VRALFTATVEKFGRVDVLFNNAGT 112 (272)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 677776666655555778877654
No 428
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=94.92 E-value=0.046 Score=55.45 Aligned_cols=175 Identities=10% Similarity=0.117 Sum_probs=102.4
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcE-EEEeCC----------hHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcE
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRT----------TSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRV 76 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~----------~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~adv 76 (487)
++|.|-|.|++|...|+.|.+.|..| .+.|.+ .+.+.++.++.....++..+ .-+.+++... +||+
T Consensus 222 ~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~-~~~~~~i~~~--~~DI 298 (424)
T 3k92_A 222 ARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTD-VITNEELLEK--DCDI 298 (424)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSC-CBCHHHHHHS--CCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcE-EecCccceec--cccE
Confidence 57999999999999999999999987 466766 55555444321100000011 1245665542 4999
Q ss_pred EEEecCCChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC--CCCChhhhcCCCccccCCCHH
Q 011394 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG--VSGGEEGARHGPSLMPGGSFE 154 (487)
Q Consensus 77 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p--vsgg~~~a~~G~~i~~gg~~~ 154 (487)
++-|.....-.. +-.+.+ .-++|+...|.. .+.+..+.+.++|+.|+.-- -.||.. -.
T Consensus 299 liPcA~~n~I~~----~~a~~l-~ak~V~EgAN~p--~t~eA~~iL~~rGI~~~PD~~aNAGGV~-------------vS 358 (424)
T 3k92_A 299 LVPAAISNQITA----KNAHNI-QASIVVERANGP--TTIDATKILNERGVLLVPDILASAGGVT-------------VS 358 (424)
T ss_dssp EEECSCSSCBCT----TTGGGC-CCSEEECCSSSC--BCHHHHHHHHHTTCEEECHHHHTTHHHH-------------HH
T ss_pred EeecCcccccCh----hhHhhc-CceEEEcCCCCC--CCHHHHHHHHHCCCEEECchHhcCCCEE-------------ee
Confidence 998876542111 122334 567888888875 34566778899999887432 233321 12
Q ss_pred HHHHHHHHHHHHhccCCCCCCeEEEeCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011394 155 AYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVF 226 (487)
Q Consensus 155 ~~~~v~~ll~~ig~~~~~~~~~~~~~G~~G~g~~~K~v~N~~~~~~~~~~~Ea~~l~~~~g~i~~~~i~~v~ 226 (487)
.+|.++. +.. ..+- ..-+...+...+...+.+.+..+++.+ +++.+...++
T Consensus 359 ~~E~~qn----~~~--------~~w~--------~eeV~~~l~~~m~~~~~~v~~~a~~~~-~~~~~aA~~~ 409 (424)
T 3k92_A 359 YFEWVQN----NQG--------YYWS--------EEEVAEKLRSVMVSSFETIYQTAATHK-VDMRLAAYMT 409 (424)
T ss_dssp HHHHHHH----HHT--------CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHT-CCHHHHHHHH
T ss_pred hhHHHhc----ccc--------cCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHhC-cCHHHHHHHH
Confidence 2332222 111 0110 123444555556667777888888888 8877665554
No 429
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=94.91 E-value=0.044 Score=51.24 Aligned_cols=91 Identities=15% Similarity=0.231 Sum_probs=56.8
Q ss_pred CCCCCCCCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCC-hHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE
Q 011394 1 MVEGKQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRT-TSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII 78 (487)
Q Consensus 1 ~~~~~~~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~-~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi 78 (487)
|+..-..++|-|.| .|-+|..+++.|++.|++|.+.+|+ +++.+++.+.... .. .++.+
T Consensus 1 m~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~---~~~~~ 61 (258)
T 3afn_B 1 MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA----------------DG---GDAAF 61 (258)
T ss_dssp -CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH----------------TT---CEEEE
T ss_pred CCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh----------------cC---CceEE
Confidence 44333334566665 7999999999999999999999998 7766655443210 00 22222
Q ss_pred E--ecCCChhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 79 M--LVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 79 ~--~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+ =+.+...++.+++.+.....+=++||++...
T Consensus 62 ~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 62 FAADLATSEACQQLVDEFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 2 2334445666666665555455788877653
No 430
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=94.90 E-value=0.21 Score=49.22 Aligned_cols=125 Identities=14% Similarity=0.023 Sum_probs=68.0
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh-cCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK-EGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~-~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
..+|.|||+|-.|..+|.+|+..|. +++++|.+.-....+.++... ....+-.-+....+.+..+ .+++-+...+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~i-nP~v~v~~~~~~ 112 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI-FPLMDATGVKLS 112 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHH-CTTCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHh-CCCCEEEEEecc
Confidence 3589999999999999999999997 888999875322222211100 0000000111222222221 145555554321
Q ss_pred ---------hh--HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 85 ---------AP--VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 85 ---------~~--v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
.. ...-.+.+...+.+-++|||++-... .-..+...+...++.++.+.
T Consensus 113 i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~-tR~lin~~c~~~~~plI~aa 171 (340)
T 3rui_A 113 IPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE-SRWLPSLLSNIENKTVINAA 171 (340)
T ss_dssp CCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG-GGHHHHHHHHHTTCEEEEEE
T ss_pred ccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH-HHHHHHHHHHHcCCcEEEee
Confidence 00 01111223344556789999986653 33344566677888888753
No 431
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=94.90 E-value=0.059 Score=52.03 Aligned_cols=73 Identities=14% Similarity=0.362 Sum_probs=57.6
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
+++.||| ...+|.+||..|.+.+.+|+++... +.++++..++ +|+||.++.-+..
T Consensus 180 k~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~---------------------T~dl~~~~~~---ADIvV~A~G~p~~ 235 (303)
T 4b4u_A 180 KHAVVVGRSAILGKPMAMMLLQANATVTICHSR---------------------TQNLPELVKQ---ADIIVGAVGKAEL 235 (303)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------------------CSSHHHHHHT---CSEEEECSCSTTC
T ss_pred CEEEEEeccccccchHHHHHHhcCCEEEEecCC---------------------CCCHHHHhhc---CCeEEeccCCCCc
Confidence 3799999 6678999999999999999998643 2356666776 9999999976643
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+. ..++++|.+|||.+..
T Consensus 236 i~------~d~vk~GavVIDVGin 253 (303)
T 4b4u_A 236 IQ------KDWIKQGAVVVDAGFH 253 (303)
T ss_dssp BC------GGGSCTTCEEEECCCB
T ss_pred cc------cccccCCCEEEEecee
Confidence 22 2468899999999864
No 432
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=94.87 E-value=0.14 Score=48.38 Aligned_cols=85 Identities=9% Similarity=0.132 Sum_probs=56.3
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~--vp~~~ 85 (487)
.+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... .... .++.++. +.+..
T Consensus 10 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--------------~~~~---~~~~~~~~Dv~~~~ 72 (265)
T 3lf2_A 10 VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQ--------------RFPG---ARLFASVCDVLDAL 72 (265)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------HSTT---CCEEEEECCTTCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--------------hcCC---ceEEEEeCCCCCHH
Confidence 344455 78999999999999999999999999887776553221 0000 1233322 34445
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=+++|+....
T Consensus 73 ~v~~~~~~~~~~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 73 QVRAFAEACERTLGCASILVNNAGQ 97 (265)
T ss_dssp HHHHHHHHHHHHHCSCSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 6777777776655556788887654
No 433
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=94.86 E-value=0.072 Score=51.04 Aligned_cols=83 Identities=16% Similarity=0.179 Sum_probs=55.6
Q ss_pred cEEEE-c-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 9 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 9 kIgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
|+.+| | .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~~~ 69 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG----------------G---GEAAALAGDVGDE 69 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT----------------T---CCEEECCCCTTCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------C---CcEEEEECCCCCH
Confidence 44454 5 689999999999999999999999998887766543210 0 222222 23344
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++.+.....+=+++|+....
T Consensus 70 ~~v~~~~~~~~~~~g~iD~lvnnAg~ 95 (280)
T 3tox_A 70 ALHEALVELAVRRFGGLDTAFNNAGA 95 (280)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 55666666666655555788877654
No 434
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=94.85 E-value=0.022 Score=57.31 Aligned_cols=84 Identities=10% Similarity=0.115 Sum_probs=60.7
Q ss_pred CCCcEEEEcc-cHHHHHHHHHHHHCCC---cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011394 6 QLTRIGLAGL-AVMGQNLALNIAEKGF---PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (487)
Q Consensus 6 ~~~kIgiIGl-G~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v 81 (487)
...||-|||. |+.|..-+..+..-|. .|++||+++... +. + .+++. . +|+||-|+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~-----~------~~~i~-~---aDivIn~v 271 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR------GG-----P------FDEIP-Q---ADIFINCI 271 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT------CS-----C------CTHHH-H---SSEEEECC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc------CC-----c------hhhHh-h---CCEEEECc
Confidence 3468999999 9999999999999998 999999886321 21 1 13443 4 99999999
Q ss_pred CCChhHHHHH-HHHhhcc-cCCCEEEecCCC
Q 011394 82 KAGAPVDETI-KTLSAYM-EKGDCIIDGGNE 110 (487)
Q Consensus 82 p~~~~v~~vl-~~l~~~l-~~g~iiId~st~ 110 (487)
.-+.....++ ++.+..+ ++|.+|||.|.-
T Consensus 272 lig~~aP~Lvt~e~v~~m~k~gsVIVDVA~D 302 (394)
T 2qrj_A 272 YLSKPIAPFTNMEKLNNPNRRLRTVVDVSAD 302 (394)
T ss_dssp CCCSSCCCSCCHHHHCCTTCCCCEEEETTCC
T ss_pred CcCCCCCcccCHHHHhcCcCCCeEEEEEecC
Confidence 8532211222 4555667 899999999743
No 435
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=94.84 E-value=0.0082 Score=59.55 Aligned_cols=91 Identities=11% Similarity=0.135 Sum_probs=54.7
Q ss_pred CCCcEEEEc-ccHHHHHHHHHHHHCC---CcEEEEe-C-ChHHHHHHHHhhhhcCCCCccccC-CHHHHHhhcCCCcEEE
Q 011394 6 QLTRIGLAG-LAVMGQNLALNIAEKG---FPISVYN-R-TTSKVDETVERAKKEGDLPLFGFR-DPESFVNSIQKPRVII 78 (487)
Q Consensus 6 ~~~kIgiIG-lG~mG~~lA~~L~~~G---~~V~v~d-r-~~~~~~~l~~~~~~~g~~~~~~~~-s~~e~~~~l~~advIi 78 (487)
+|+||+|+| .|.+|+.+.+.|.+++ ++|..++ + +..+.-.+. +. .+...+ +++.+ + ++|+||
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~--~~-----~i~~~~~~~~~~-~---~vDvVf 70 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFN--GK-----TVRVQNVEEFDW-S---QVHIAL 70 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEET--TE-----EEEEEEGGGCCG-G---GCSEEE
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeec--Cc-----eeEEecCChHHh-c---CCCEEE
Confidence 367999999 9999999999999874 3566554 2 221100000 00 112211 12222 3 399999
Q ss_pred EecCCChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 79 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+|+|... ..+.... ++..|..+||.|+..
T Consensus 71 ~a~g~~~-s~~~a~~---~~~~G~~vId~s~~~ 99 (336)
T 2r00_A 71 FSAGGEL-SAKWAPI---AAEAGVVVIDNTSHF 99 (336)
T ss_dssp ECSCHHH-HHHHHHH---HHHTTCEEEECSSTT
T ss_pred ECCCchH-HHHHHHH---HHHcCCEEEEcCCcc
Confidence 9998752 3333333 345788999998764
No 436
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.81 E-value=0.029 Score=53.41 Aligned_cols=70 Identities=14% Similarity=0.255 Sum_probs=48.5
Q ss_pred CcEEEEcc-cHHHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecC
Q 011394 8 TRIGLAGL-AVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 8 ~kIgiIGl-G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~--~~s~~e~~~~l~~advIi~~vp 82 (487)
|+|-|.|. |.+|+.++..|++. |++|++.+|++++.+.+...+.. +.. ..+.+++.+.++++|+||.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~-----~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVE-----VRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCE-----EEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCe-----EEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 47889985 99999999999998 99999999998876655432210 111 1234444444455888887654
No 437
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=94.81 E-value=0.17 Score=46.92 Aligned_cols=86 Identities=16% Similarity=0.220 Sum_probs=56.1
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec--CCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV--KAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~v--p~~~ 85 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... -. ....++..-+ .+..
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~--~~~~~~~~d~d~~~~~ 79 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA--------------GQ--PQPLIIALNLENATAQ 79 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--------------TS--CCCEEEECCTTTCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc--------------CC--CCceEEEeccccCCHH
Confidence 355555 699999999999999999999999999887766543211 00 0022333223 3344
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=+++|+....
T Consensus 80 ~~~~~~~~~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 80 QYRELAARVEHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcc
Confidence 5666666666655556788877654
No 438
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.81 E-value=0.052 Score=55.85 Aligned_cols=108 Identities=14% Similarity=0.310 Sum_probs=76.2
Q ss_pred CcEEEEccc----------HHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011394 8 TRIGLAGLA----------VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (487)
Q Consensus 8 ~kIgiIGlG----------~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advI 77 (487)
.+|+|+|+. .-...++..|.+.|.+|.+||+.... ...+... ++..+.++.++++. +|.|
T Consensus 323 ~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~--~~~~~~~-----~~~~~~~~~~~~~~---ad~v 392 (446)
T 4a7p_A 323 KTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVE--QASKMLT-----DVEFVENPYAAADG---ADAL 392 (446)
T ss_dssp CEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHH--HHGGGCS-----SCCBCSCHHHHHTT---BSEE
T ss_pred CEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCH--hHHHhcC-----CceEecChhHHhcC---CCEE
Confidence 589999997 66889999999999999999987532 2221111 35667888888887 9999
Q ss_pred EEecCCChhHHH-HHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 78 IMLVKAGAPVDE-TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 78 i~~vp~~~~v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
++++..+. .+. -++.+...+ ++.+|+|+-+.... +.+.+.|+.|...+
T Consensus 393 vi~t~~~~-f~~~d~~~~~~~~-~~~~i~D~r~~~~~------~~~~~~g~~y~~iG 441 (446)
T 4a7p_A 393 VIVTEWDA-FRALDLTRIKNSL-KSPVLVDLRNIYPP------AELERAGLQYTGVG 441 (446)
T ss_dssp EECSCCTT-TTSCCHHHHHTTB-SSCBEECSSCCSCH------HHHHHTTCBCCCSS
T ss_pred EEeeCCHH-hhcCCHHHHHHhc-CCCEEEECCCCCCH------HHHHhcCCEEEEec
Confidence 99998763 221 124455544 45789999988743 23456788876554
No 439
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.79 E-value=0.084 Score=49.38 Aligned_cols=83 Identities=13% Similarity=0.110 Sum_probs=56.9
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~--vp~~~ 85 (487)
++-|.| .|-+|..+|+.|++.|++|++.+|++++.+++.+..... . .++.++. +.+..
T Consensus 11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~~ 71 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD----------------G---GTAISVAVDVSDPE 71 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CEEEEEECCTTSHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----------------C---CcEEEEEccCCCHH
Confidence 455556 689999999999999999999999998887766543210 1 2233332 34445
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=+++|++...
T Consensus 72 ~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 72 SAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 6667777666655566788877654
No 440
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.78 E-value=0.048 Score=52.40 Aligned_cols=71 Identities=15% Similarity=0.190 Sum_probs=47.6
Q ss_pred CCcEEEEcc-cHHHHHHHHHHHHCC-CcEEEEeCChHHHH--HHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEe
Q 011394 7 LTRIGLAGL-AVMGQNLALNIAEKG-FPISVYNRTTSKVD--ETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIML 80 (487)
Q Consensus 7 ~~kIgiIGl-G~mG~~lA~~L~~~G-~~V~v~dr~~~~~~--~l~~~~~~~g~~~~~~--~~s~~e~~~~l~~advIi~~ 80 (487)
+++|.|.|. |.+|..++..|++.| ++|.+.+|++++.. .+...+.. +.. ..+.+++.+.++.+|+||.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~-----~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAE-----VVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCE-----EEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCE-----EEEecCCCHHHHHHHHhcCCEEEEe
Confidence 468999986 999999999999998 99999999977642 22222110 111 12344444444458888877
Q ss_pred cC
Q 011394 81 VK 82 (487)
Q Consensus 81 vp 82 (487)
..
T Consensus 80 a~ 81 (299)
T 2wm3_A 80 TN 81 (299)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 441
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.78 E-value=0.066 Score=52.95 Aligned_cols=95 Identities=12% Similarity=0.006 Sum_probs=59.2
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhc---CCCcEEEEecC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSI---QKPRVIIMLVK 82 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~~~~~-~~s~~e~~~~l---~~advIi~~vp 82 (487)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.+... -+.. ..+..+.+.++ ...|+||-++.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~---~~~~~~~~~~~~v~~~~~g~g~D~vid~~g 245 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY---VINPFEEDVVKEVMDITDGNGVDVFLEFSG 245 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE---EECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE---EECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 479999999999999999989999 9999999999887776544311 0000 11222222221 13688888776
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCC
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st 109 (487)
.... ++...+.+.++-.++..+.
T Consensus 246 ~~~~----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 246 APKA----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp CHHH----HHHHHHHEEEEEEEEECCC
T ss_pred CHHH----HHHHHHHHhcCCEEEEEcc
Confidence 4322 2333344445555555543
No 442
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.74 E-value=0.1 Score=49.38 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=57.3
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 85 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+..
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~~~~ 73 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT----------------G---RRALSVGTDITDDA 73 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEcCCCCHH
Confidence 355555 678999999999999999999999998887766543210 0 233333 244555
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++++.....+=+++|+....
T Consensus 74 ~v~~~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 74 QVAHLVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHHHHHHHHHHTSCCSEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCC
Confidence 6777777777666566788887643
No 443
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=94.74 E-value=0.099 Score=49.77 Aligned_cols=82 Identities=17% Similarity=0.206 Sum_probs=54.9
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
+|-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+... .. ...+..=+.+...+
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~~~~~~ 66 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP-----------------DR---AEAISLDVTDGERI 66 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT-----------------TT---EEEEECCTTCHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-----------------CC---ceEEEeeCCCHHHH
Confidence 455555 7999999999999999999999999887766554211 01 22222334444566
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++++.....+=++||++...
T Consensus 67 ~~~~~~~~~~~g~id~lv~~Ag~ 89 (281)
T 3m1a_A 67 DVVAADVLARYGRVDVLVNNAGR 89 (281)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCCc
Confidence 66666666555555788877653
No 444
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.73 E-value=0.082 Score=48.84 Aligned_cols=85 Identities=14% Similarity=0.250 Sum_probs=53.7
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cCCC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VKAG 84 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~--vp~~ 84 (487)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... + .. .++.++. +.+.
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------------~--~~---~~~~~~~~D~~~~ 64 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ-------------E--QG---VEVFYHHLDVSKA 64 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------------H--HC---CCEEEEECCTTCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------------h--cC---CeEEEEEeccCCH
Confidence 3455666 68899999999999999999999999887776543210 0 01 2333332 3334
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++++.....+=+++|+....
T Consensus 65 ~~v~~~~~~~~~~~g~id~li~~Ag~ 90 (235)
T 3l77_A 65 ESVEEFSKKVLERFGDVDVVVANAGL 90 (235)
T ss_dssp HHHHHHCC-HHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCcc
Confidence 44555555555444455677776544
No 445
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.72 E-value=0.14 Score=52.99 Aligned_cols=117 Identities=14% Similarity=0.221 Sum_probs=76.3
Q ss_pred CcEEEEcccH----------HHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc----C---CCCccccCCHHHHHhh
Q 011394 8 TRIGLAGLAV----------MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE----G---DLPLFGFRDPESFVNS 70 (487)
Q Consensus 8 ~kIgiIGlG~----------mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~----g---~~~~~~~~s~~e~~~~ 70 (487)
.+|+|+|+.. -...++..|.+.|.+|.+||+.-...+ +....... + ..++..+.++.+.++.
T Consensus 330 ~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (467)
T 2q3e_A 330 KKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQ-IVVDLSHPGVSEDDQVSRLVTISKDPYEACDG 408 (467)
T ss_dssp CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHH-HHHHHCC------CHHHHHEEECSSHHHHHTT
T ss_pred CEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHH-HhhhhccccccccccccCceeecCCHHHHHhC
Confidence 5799999975 888999999999999999998632211 11110000 0 0013456678888776
Q ss_pred cCCCcEEEEecCCChhHHHH-HHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 71 IQKPRVIIMLVKAGAPVDET-IKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 71 l~~advIi~~vp~~~~v~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
+|.|++++..+ +.+.. ++.+...+....+|+|.-+.... ..+.+...|+.|...+
T Consensus 409 ---ad~~vi~t~~~-~f~~~~~~~~~~~~~~~~~i~D~r~~~~~----~~~~~~~~g~~~~~ig 464 (467)
T 2q3e_A 409 ---AHAVVICTEWD-MFKELDYERIHKKMLKPAFIFDGRRVLDG----LHNELQTIGFQIETIG 464 (467)
T ss_dssp ---CSEEEECSCCG-GGGGSCHHHHHHHSCSSCEEEESSCTTTT----CHHHHHHHTCEEEETT
T ss_pred ---CcEEEEecCCh-hhhcCCHHHHHHhcCCCCEEEeCCCcCCc----hHHHHHhcCcEEEEeC
Confidence 99999999876 33321 34555555555669999888743 1233455688887654
No 446
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.72 E-value=0.086 Score=50.37 Aligned_cols=85 Identities=16% Similarity=0.159 Sum_probs=57.1
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.++.... -.. ...+-.=+.+...+
T Consensus 34 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~---~~~~~~Dl~d~~~v 96 (276)
T 3r1i_A 34 RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--------------GGK---ALPIRCDVTQPDQV 96 (276)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--------------TCC---CEEEECCTTCHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCe---EEEEEcCCCCHHHH
Confidence 455555 789999999999999999999999998877665543210 001 22222234455567
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++++.....+=+++|+....
T Consensus 97 ~~~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 97 RGMLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 77777776655566788887654
No 447
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=94.71 E-value=0.13 Score=49.33 Aligned_cols=82 Identities=17% Similarity=0.273 Sum_probs=56.5
Q ss_pred EEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cCCChh
Q 011394 10 IGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VKAGAP 86 (487)
Q Consensus 10 IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~--vp~~~~ 86 (487)
+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++. +.+...
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~Dv~d~~~ 91 (283)
T 3v8b_A 31 ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA----------------G---GQAIALEADVSDELQ 91 (283)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT----------------T---CCEEEEECCTTCHHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEccCCCHHH
Confidence 44455 789999999999999999999999998887766543210 0 2333332 445556
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++++.....+=+++|+....
T Consensus 92 v~~~~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 92 MRNAVRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 777777776655556788887654
No 448
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=94.70 E-value=0.14 Score=48.05 Aligned_cols=82 Identities=13% Similarity=0.208 Sum_probs=55.1
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++-|.| .|-+|..+|+.|++.|++|++.+|++++.+++.+.... . ...+..=+.+...+
T Consensus 11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~---~~~~~~D~~~~~~~ 70 (261)
T 3n74_A 11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD-----------------A---ALAVAADISKEADV 70 (261)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT-----------------T---EEEEECCTTSHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC-----------------c---eEEEEecCCCHHHH
Confidence 466666 67899999999999999999999999888776543210 0 12222223444556
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++.+.....+=+++|++...
T Consensus 71 ~~~~~~~~~~~g~id~li~~Ag~ 93 (261)
T 3n74_A 71 DAAVEAALSKFGKVDILVNNAGI 93 (261)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCcc
Confidence 66666666555555777776554
No 449
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=94.70 E-value=0.2 Score=46.57 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=33.7
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (487)
+|-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+
T Consensus 13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (254)
T 2wsb_A 13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ 53 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 465665 7999999999999999999999999887765543
No 450
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.69 E-value=0.38 Score=47.95 Aligned_cols=94 Identities=13% Similarity=0.216 Sum_probs=63.6
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhc-CCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSI-QKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l-~~advIi~~vp~~~~ 86 (487)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.+... +.-..+ .+.++.+ ...|+||-++..+..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~----vi~~~~-~~~~~~~~~g~Dvvid~~g~~~~ 270 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE----VVNSRN-ADEMAAHLKSFDFILNTVAAPHN 270 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE----EEETTC-HHHHHTTTTCEEEEEECCSSCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE----Eecccc-HHHHHHhhcCCCEEEECCCCHHH
Confidence 4799999999999999888889999999999999988777655321 111122 2333322 347999999976544
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++. ....+.++-.++..+..
T Consensus 271 ~~~----~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 271 LDD----FTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp HHH----HHTTEEEEEEEEECCCC
T ss_pred HHH----HHHHhccCCEEEEeccC
Confidence 443 34555666666666543
No 451
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.69 E-value=0.25 Score=47.61 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=70.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCC-----ccchhhHHHHHHHHhhCCC-CC
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGC-----IIRAVFLDRIKKAYDRNAD-LA 397 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gc-----ii~s~ll~~~~~~~~~~~~-~~ 397 (487)
.+.++.+|+++|.+.+..+..++|++.+.++. ++|..+++++|+..- --+|++.+ .+. +.
T Consensus 174 ~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~------G~d~~~~~~~~~~~~~i~~~~~~s~~~~--------~~~~~~ 239 (296)
T 3qha_A 174 PGAGTRMKLARNMLTFTSYAAACEAMKLAEAA------GLDLQALGRVVRHTDALTGGPGAIMVRD--------NMKDLE 239 (296)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHHHCCGGGGCCCS--------SCSCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHhhhcchHHHHhcCcccCHHhh--------chhhhh
Confidence 37889999999999999999999999998853 499999977776321 22343322 111 11
Q ss_pred CCcCChhHHH--HH-hhhhhhHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011394 398 NLLVDPEFAK--EI-VDRQSAWRRVVCLAINSGISTPGMSSSLAYFD 441 (487)
Q Consensus 398 ~ll~~~~~~~--~~-~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~ 441 (487)
. .++-|.- .. .-....++-++..|.+.|+|+|.+.++...|.
T Consensus 240 ~--~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~ 284 (296)
T 3qha_A 240 P--DNFLYQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGLA 284 (296)
T ss_dssp T--TSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred c--CCCCCchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 2 2233332 00 23455678888999999999999999987554
No 452
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.68 E-value=0.15 Score=48.10 Aligned_cols=84 Identities=20% Similarity=0.204 Sum_probs=56.1
Q ss_pred cEEEE-c-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 9 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 9 kIgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
|+.+| | .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . ..++.++ =+.+.
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------------~---~~~~~~~~~Dv~~~ 72 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL---------------G---SGKVIGVQTDVSDR 72 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------------S---SSCEEEEECCTTSH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---------------C---CCcEEEEEcCCCCH
Confidence 44455 4 789999999999999999999999999877766543210 0 0122222 23444
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++.+.....+=+++|++...
T Consensus 73 ~~v~~~~~~~~~~~g~id~lvnnAg~ 98 (262)
T 3pk0_A 73 AQCDALAGRAVEEFGGIDVVCANAGV 98 (262)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 56667776666655556788877654
No 453
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.66 E-value=0.08 Score=52.18 Aligned_cols=42 Identities=10% Similarity=0.249 Sum_probs=29.6
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCC-CcEEEE-eC-ChHHHHHHHH
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKG-FPISVY-NR-TTSKVDETVE 48 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G-~~V~v~-dr-~~~~~~~l~~ 48 (487)
|.||||+|.|++|+.+.+.|.++. .+|... |+ +++....+.+
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~ 45 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLK 45 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHH
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhc
Confidence 358999999999999999998864 365544 44 3444443333
No 454
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=94.63 E-value=0.18 Score=47.09 Aligned_cols=83 Identities=14% Similarity=0.207 Sum_probs=54.7
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 85 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... .. .++.++ =+.+..
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----------------~~---~~~~~~~~Dv~~~~ 69 (247)
T 2jah_A 9 VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA----------------AG---AKVHVLELDVADRQ 69 (247)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------------TT---CCEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh----------------cC---CcEEEEECCCCCHH
Confidence 455555 78999999999999999999999998887765543211 01 223222 234445
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=+++|+....
T Consensus 70 ~~~~~~~~~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 70 GVDAAVASTVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5666666665555455778776543
No 455
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=94.62 E-value=0.084 Score=50.07 Aligned_cols=91 Identities=12% Similarity=0.093 Sum_probs=56.2
Q ss_pred CCCCCCCCcEEEEc---ccHHHHHHHHHHHHCCCcEEEEeCChHHH-HHHHHhhhhcCCCCccccCCHHHHHhhcCCCcE
Q 011394 1 MVEGKQLTRIGLAG---LAVMGQNLALNIAEKGFPISVYNRTTSKV-DETVERAKKEGDLPLFGFRDPESFVNSIQKPRV 76 (487)
Q Consensus 1 ~~~~~~~~kIgiIG---lG~mG~~lA~~L~~~G~~V~v~dr~~~~~-~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~adv 76 (487)
|+..-+.+++-|.| .|-+|..+|+.|++.|++|.+.+|++++. +++.+... .. ..+
T Consensus 1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~---~~~ 60 (269)
T 2h7i_A 1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP-----------------AK---APL 60 (269)
T ss_dssp -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS-----------------SC---CCE
T ss_pred CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC-----------------CC---ceE
Confidence 44332334576778 58999999999999999999999997652 43332100 01 233
Q ss_pred EEEecCCChhHHHHHHHHhhccc---CCCEEEecCCCC
Q 011394 77 IIMLVKAGAPVDETIKTLSAYME---KGDCIIDGGNEW 111 (487)
Q Consensus 77 Ii~~vp~~~~v~~vl~~l~~~l~---~g~iiId~st~~ 111 (487)
+..=+.+...++.+++.+..... +=+++|++....
T Consensus 61 ~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 61 LELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM 98 (269)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCC
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccC
Confidence 33334455566777766665543 336777766543
No 456
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.62 E-value=0.12 Score=48.05 Aligned_cols=84 Identities=11% Similarity=0.068 Sum_probs=57.4
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 85 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+..
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~~ 67 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK----------------G---FKARGLVLNISDIE 67 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CceEEEEecCCCHH
Confidence 455555 789999999999999999999999998877765533210 0 223222 244455
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
.++.+++++.....+=+++|++....
T Consensus 68 ~~~~~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 68 SIQNFFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHHHHHHHHHHTTCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 67777777766555557888876543
No 457
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=94.61 E-value=0.15 Score=48.46 Aligned_cols=83 Identities=8% Similarity=0.051 Sum_probs=55.3
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+...+
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~~~~~v 72 (271)
T 3tzq_B 13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG-----------------RG---AVHHVVDLTNEVSV 72 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC-----------------TT---CEEEECCTTCHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-----------------CC---eEEEECCCCCHHHH
Confidence 354555 6899999999999999999999999887766554321 01 22222234444566
Q ss_pred HHHHHHHhhcccCCCEEEecCCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+.+++.+.....+=+++|+.....
T Consensus 73 ~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 73 RALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 666666666555557788766543
No 458
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=94.58 E-value=0.12 Score=48.16 Aligned_cols=87 Identities=11% Similarity=0.100 Sum_probs=54.9
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+.... .. -.. ..++..=+.+...
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~---~~~---~~~~~~D~~~~~~ 66 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH----------AY---ADK---VLRVRADVADEGD 66 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHST----------TT---GGG---EEEEECCTTCHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH----------hc---CCc---EEEEEecCCCHHH
Confidence 3466665 79999999999999999999999998877665543200 00 011 1222222334445
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++++.....+=++||++...
T Consensus 67 ~~~~~~~~~~~~~~id~li~~Ag~ 90 (250)
T 2cfc_A 67 VNAAIAATMEQFGAIDVLVNNAGI 90 (250)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 666666665555455777776643
No 459
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=94.57 E-value=0.029 Score=57.94 Aligned_cols=106 Identities=13% Similarity=0.149 Sum_probs=71.9
Q ss_pred CcEEEEccc----HHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 8 TRIGLAGLA----VMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 8 ~kIgiIGlG----~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
.+|+|||++ .+|..+.++|.+.| +.|+..|+..+.+ . ++..+.|++|+... +|++++++|
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i---------~---G~~~y~sl~~lp~~---~Dlavi~vp 73 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV---------Q---GVKAYKSVKDIPDE---IDLAIIVVP 73 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE---------T---TEECBSSTTSCSSC---CSEEEECSC
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeE---------C---CEeccCCHHHcCCC---CCEEEEecC
Confidence 479999998 89999999999985 6676666652211 1 35678888887665 999999999
Q ss_pred CChhHHHHHHHHhhcccCCCEEEecCCCCch--h-----HHHHHHHHHHcCCeEEe
Q 011394 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYE--N-----TERREKAMAELGLLYLG 131 (487)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~--~-----~~~~~~~l~~~g~~~i~ 131 (487)
.. .+.++++++...- - +.++..+.+.+. + .+++.+.+++.|+++++
T Consensus 74 ~~-~~~~~v~e~~~~G-i-~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viG 126 (457)
T 2csu_A 74 KR-FVKDTLIQCGEKG-V-KGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIG 126 (457)
T ss_dssp HH-HHHHHHHHHHHHT-C-CEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEEC
T ss_pred HH-HHHHHHHHHHHcC-C-CEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEc
Confidence 75 5677776665531 2 334444444432 2 34555666777888774
No 460
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.56 E-value=0.024 Score=59.48 Aligned_cols=63 Identities=13% Similarity=0.225 Sum_probs=45.6
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp 82 (487)
+|+|.|.| .|.+|+.++..|++.|++|++.+|++.+.+. . .....+...+.+ +++|+||-+..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~----v------~~d~~~~~~~~l---~~~D~Vih~A~ 210 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK----R------FWDPLNPASDLL---DGADVLVHLAG 210 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC----E------ECCTTSCCTTTT---TTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc----e------eecccchhHHhc---CCCCEEEECCC
Confidence 78999998 7999999999999999999999999765311 0 011122223333 34899998764
No 461
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=94.56 E-value=0.15 Score=48.74 Aligned_cols=85 Identities=16% Similarity=0.287 Sum_probs=56.6
Q ss_pred cEEEE-c-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCC-cEEEEecCCCh
Q 011394 9 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKP-RVIIMLVKAGA 85 (487)
Q Consensus 9 kIgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~a-dvIi~~vp~~~ 85 (487)
|+.+| | .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... .... . ..+-.=+.+..
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~---~~~~~~~Dv~d~~ 96 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG--------------RTGN---IVRAVVCDVGDPD 96 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------HHSS---CEEEEECCTTCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--------------cCCC---eEEEEEcCCCCHH
Confidence 45555 4 78999999999999999999999999887766543211 1110 1 12222244555
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++++.....+=+++|++...
T Consensus 97 ~v~~~~~~~~~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 97 QVAALFAAVRAEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 6777777776655556788887654
No 462
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.56 E-value=0.1 Score=49.32 Aligned_cols=83 Identities=10% Similarity=0.090 Sum_probs=55.7
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 85 (487)
+|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+..
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~~ 91 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA----------------G---GEAESHACDLSHSD 91 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CEEEEEECCTTCHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----------------C---CceeEEEecCCCHH
Confidence 455555 799999999999999999999999998877765533210 0 222222 234445
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++++.....+=++||++...
T Consensus 92 ~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 92 AIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCc
Confidence 5666666666555556778877654
No 463
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=94.54 E-value=0.07 Score=50.16 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=52.4
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++-|.| .|-+|..+|+.|++.|++|++.+|++++.+.+.+ .. +. . .++..+ +...+
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~--------------~~--~---~~~~~~---d~~~v 59 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FA--------------ET--Y---PQLKPM---SEQEP 59 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HH--------------HH--C---TTSEEC---CCCSH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HH--------------hc--C---CcEEEE---CHHHH
Confidence 454555 7899999999999999999999999887655432 11 00 1 222222 44567
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++.+.....+=+++|+....
T Consensus 60 ~~~~~~~~~~~g~iD~lv~nAg~ 82 (254)
T 1zmt_A 60 AELIEAVTSAYGQVDVLVSNDIF 82 (254)
T ss_dssp HHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCc
Confidence 77777666555455777776654
No 464
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.54 E-value=0.1 Score=51.51 Aligned_cols=41 Identities=15% Similarity=0.300 Sum_probs=30.7
Q ss_pred CcEEEEcccHHHHHHHHHHHHCC---CcEEEE-eC-ChHHHHHHHH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKG---FPISVY-NR-TTSKVDETVE 48 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G---~~V~v~-dr-~~~~~~~l~~ 48 (487)
+||||+|.|++|+.+.+.|.+++ ++|... |+ +++....+.+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~ 48 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLE 48 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhc
Confidence 59999999999999999998873 566544 54 5555555543
No 465
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.52 E-value=0.6 Score=44.67 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=71.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHH-HHhhCCCCCCCcCC
Q 011394 324 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKK-AYDRNADLANLLVD 402 (487)
Q Consensus 324 ~~~~~~v~~~~~ai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iw~~Gcii~s~ll~~~~~-~~~~~~~~~~ll~~ 402 (487)
.+++...|.+.|++.+..+..+.|++.+.++. +++..++.+.+..+. ..|+.+..... .++.+. ....
T Consensus 168 ~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~------G~~~~~~~~~~~~~~-~~s~~~~~~~~~~l~~~~-~~g~--- 236 (299)
T 1vpd_A 168 IGAGNVTKLANQVIVALNIAAMSEALTLATKA------GVNPDLVYQAIRGGL-AGSTVLDAKAPMVMDRNF-KPGF--- 236 (299)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHTTST-TCCHHHHHHHHHHHTTCC-CCSS---
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHccC-CCCHHHHHhhhHhhcCCC-CCCC---
Confidence 36778899999999999999999999987653 389999999998874 46666554333 332221 1111
Q ss_pred hhHHHHHhhhhhhHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011394 403 PEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFD 441 (487)
Q Consensus 403 ~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~aal~~~~ 441 (487)
.... ....++.++..|.+.|+|+|...+....+.
T Consensus 237 -~~~~----~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~ 270 (299)
T 1vpd_A 237 -RIDL----HIKDLANALDTSHGVGAQLPLTAAVMEMMQ 270 (299)
T ss_dssp -BHHH----HHHHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred -ChHH----HHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 1111 112458899999999999999888776554
No 466
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=94.51 E-value=0.14 Score=51.46 Aligned_cols=110 Identities=14% Similarity=0.143 Sum_probs=67.8
Q ss_pred CcEEEEcccHHHHH-HHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc----CC-------CCccccC-CHHHHHhhcCCC
Q 011394 8 TRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTTSKVDETVERAKKE----GD-------LPLFGFR-DPESFVNSIQKP 74 (487)
Q Consensus 8 ~kIgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~----g~-------~~~~~~~-s~~e~~~~l~~a 74 (487)
||+-.+|.|++|++ ++..|.++|++|+..|++...++.+.+++.-. |. .+++... ..+++.+.+..+
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~~i~~a 80 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQV 80 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTTCEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHHHHTTC
T ss_pred CcEEEECCCccchhhHHHHHHHcCCeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHHHHcCC
Confidence 68889999999977 56677889999999999999999998764210 00 0222221 223444444559
Q ss_pred cEEEEecCCChhHHHHHHHHhhcc--------cCCCEEEecCCCCchhHHHHH
Q 011394 75 RVIIMLVKAGAPVDETIKTLSAYM--------EKGDCIIDGGNEWYENTERRE 119 (487)
Q Consensus 75 dvIi~~vp~~~~v~~vl~~l~~~l--------~~g~iiId~st~~~~~~~~~~ 119 (487)
|+|.+++... ..+.+...|...| .++-+|+.|-|.. .....+.
T Consensus 81 dlitT~vG~~-~l~~i~~~l~~~L~~R~~~~~~~pltilsCeN~~-~ng~~lk 131 (382)
T 3h2z_A 81 DLVTTAVGPV-VLERIAPAIAKGLVKRKEQGNESPLNIIACENMV-RGTTQLK 131 (382)
T ss_dssp SEEEECCCHH-HHHHTHHHHHHHHHHHHHHTCCSCEEEEECCSST-THHHHHH
T ss_pred CEEEECCCcc-cHHHHHHHHHHHHHHHHHcCCCCCcEEEECCCcc-chHHHHH
Confidence 9998888642 3343332222211 2445677777754 3443443
No 467
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.51 E-value=0.035 Score=55.05 Aligned_cols=34 Identities=29% Similarity=0.510 Sum_probs=31.4
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCCh
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTT 40 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~ 40 (487)
+.+|.|||.|.+|.+.|..|++.|++|+++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4589999999999999999999999999999863
No 468
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.51 E-value=0.034 Score=53.10 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=33.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHH
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSK 42 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~ 42 (487)
||+|-|.|+|.+|+.++..|++.|++|++.+|++++
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 578999999999999999999999999999998765
No 469
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=94.51 E-value=0.14 Score=48.99 Aligned_cols=82 Identities=13% Similarity=0.137 Sum_probs=55.4
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+...+
T Consensus 7 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~~~~~v 66 (281)
T 3zv4_A 7 VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG-----------------GN---AVGVVGDVRSLQDQ 66 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB-----------------TT---EEEEECCTTCHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC-----------------Cc---EEEEEcCCCCHHHH
Confidence 344555 7899999999999999999999999988776554211 00 22222223444566
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++++.....+=+++|+....
T Consensus 67 ~~~~~~~~~~~g~iD~lvnnAg~ 89 (281)
T 3zv4_A 67 KRAAERCLAAFGKIDTLIPNAGI 89 (281)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCc
Confidence 67777766655556788877654
No 470
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=94.50 E-value=0.12 Score=47.84 Aligned_cols=42 Identities=17% Similarity=0.167 Sum_probs=35.5
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (487)
.++|-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK 49 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 34677777 5999999999999999999999999887766544
No 471
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=94.50 E-value=0.35 Score=43.79 Aligned_cols=118 Identities=10% Similarity=0.069 Sum_probs=73.4
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCC-Cccc-cCCHHHHHhhcCCCcEEEEecCCCh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDL-PLFG-FRDPESFVNSIQKPRVIIMLVKAGA 85 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~-~~~~-~~s~~e~~~~l~~advIi~~vp~~~ 85 (487)
.+|--||+|. | .++..+++.+.+|+++|.+++.++.+.+.....+-. ++.. ..+..+........|+|++....
T Consensus 57 ~~vLDlGcG~-G-~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-- 132 (204)
T 3njr_A 57 ELLWDIGGGS-G-SVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-- 132 (204)
T ss_dssp CEEEEETCTT-C-HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC--
T ss_pred CEEEEecCCC-C-HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc--
Confidence 5788999987 4 355556666899999999999887766543221100 1222 23444433333458999876532
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 131 (487)
..+ +++.+...+++|-.++-.+ ..+....+..+.+.+.|.....
T Consensus 133 ~~~-~l~~~~~~LkpgG~lv~~~-~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 133 SQA-LYDRLWEWLAPGTRIVANA-VTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp CHH-HHHHHHHHSCTTCEEEEEE-CSHHHHHHHHHHHHHHCSEEEE
T ss_pred cHH-HHHHHHHhcCCCcEEEEEe-cCcccHHHHHHHHHhCCCcEEE
Confidence 345 7788888888876555332 3345666667777777765544
No 472
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=94.49 E-value=0.19 Score=47.47 Aligned_cols=88 Identities=13% Similarity=0.168 Sum_probs=55.6
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
+|-|.| .|-+|..+++.|++.|++|.+.+|++++.+++.+..... . .. .. ...+..=+.+...+
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------~-~~----~~---~~~~~~D~~~~~~v 73 (267)
T 2gdz_A 9 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-------F-EP----QK---TLFIQCDVADQQQL 73 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-------S-CG----GG---EEEEECCTTSHHHH
T ss_pred EEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-------c-CC----Cc---eEEEecCCCCHHHH
Confidence 466665 789999999999999999999999988776554432110 0 00 01 11222223444566
Q ss_pred HHHHHHHhhcccCCCEEEecCCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+.+++++.....+=+++|+.....
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 74 RDTFRKVVDHFGRLDILVNNAGVN 97 (267)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 666666665555557888876543
No 473
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=94.48 E-value=0.19 Score=47.96 Aligned_cols=80 Identities=13% Similarity=0.164 Sum_probs=53.5
Q ss_pred cEEE-Ec-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 9 RIGL-AG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 9 kIgi-IG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
|+.+ .| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .++.++ =+.+.
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------------~~~~~~~~Dv~d~ 85 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG----------------------SKAFGVRVDVSSA 85 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC----------------------TTEEEEECCTTCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------------CceEEEEecCCCH
Confidence 4444 45 7899999999999999999999999988776654321 112222 23444
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++.+.....+=+++|+....
T Consensus 86 ~~v~~~~~~~~~~~g~iD~lv~nAg~ 111 (277)
T 4dqx_A 86 KDAESMVEKTTAKWGRVDVLVNNAGF 111 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 55666666666555555777776553
No 474
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=94.48 E-value=0.093 Score=52.56 Aligned_cols=41 Identities=15% Similarity=0.300 Sum_probs=30.5
Q ss_pred CcEEEEcccHHHHHHHHHHHHCC---CcEEEE-eC-ChHHHHHHHH
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKG---FPISVY-NR-TTSKVDETVE 48 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G---~~V~v~-dr-~~~~~~~l~~ 48 (487)
+||||+|+|++|+.+.+.|.+++ ++|... |+ +++....+.+
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~ 48 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLE 48 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhc
Confidence 59999999999999999998863 566554 54 5555555543
No 475
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=94.47 E-value=0.088 Score=49.60 Aligned_cols=83 Identities=13% Similarity=0.195 Sum_probs=56.3
Q ss_pred cEEEE--cccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 9 kIgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
|+.+| |.|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~d~ 73 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA----------------G---GKAIGLECNVTDE 73 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEECCCCCH
Confidence 45555 4789999999999999999999999998877765532210 0 233332 24444
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++.+.....+=+++|+....
T Consensus 74 ~~v~~~~~~~~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 74 QHREAVIKAALDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 56677777766655556788877654
No 476
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=94.47 E-value=0.21 Score=43.44 Aligned_cols=120 Identities=10% Similarity=0.060 Sum_probs=71.8
Q ss_pred CcEEEEcccHHHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCC-CccccCCHHHHHhhc-CCCcEEEEecCC
Q 011394 8 TRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDL-PLFGFRDPESFVNSI-QKPRVIIMLVKA 83 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~-~~~~~~s~~e~~~~l-~~advIi~~vp~ 83 (487)
.+|--||+|. | .++..+++. +.+|+++|.+++.++.+.+.....+-. ++....+..+..... ...|+|++.-+.
T Consensus 27 ~~vldiG~G~-G-~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 27 ETLWDIGGGS-G-SIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp EEEEEESTTT-T-HHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CeEEEeCCCC-C-HHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcc
Confidence 4788999997 4 455556655 679999999999887766543221100 122222332222222 348999987654
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM 132 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 132 (487)
.. ..+++.+...+++|..++-.. ..+.......+.+...+..+...
T Consensus 105 ~~--~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 105 TA--PGVFAAAWKRLPVGGRLVANA-VTVESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp TC--TTHHHHHHHTCCTTCEEEEEE-CSHHHHHHHHHHHHHHCCEEEEE
T ss_pred cH--HHHHHHHHHhcCCCCEEEEEe-eccccHHHHHHHHHHcCCeeEEE
Confidence 42 556777888888877665433 33344455566677777655543
No 477
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=94.45 E-value=0.13 Score=48.22 Aligned_cols=83 Identities=13% Similarity=0.160 Sum_probs=53.6
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 85 (487)
+|-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+.... .. .++.++ =+.+..
T Consensus 15 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----------------~~---~~~~~~~~D~~~~~ 75 (260)
T 3awd_A 15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM----------------EG---HDVSSVVMDVTNTE 75 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------------TT---CCEEEEECCTTCHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------------cC---CceEEEEecCCCHH
Confidence 466665 79999999999999999999999998876655432211 00 222222 233444
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=++||++...
T Consensus 76 ~~~~~~~~~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 76 SVQNAVRSVHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5666666655544445777776653
No 478
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.44 E-value=0.21 Score=49.45 Aligned_cols=43 Identities=14% Similarity=0.220 Sum_probs=37.0
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERA 50 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~ 50 (487)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.+
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG 216 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIG 216 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC
Confidence 479999999999999888888898 8999999999887766544
No 479
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=94.41 E-value=0.25 Score=46.54 Aligned_cols=82 Identities=21% Similarity=0.326 Sum_probs=55.0
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEE-eCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVY-NRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~-dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
++-|.| .|-+|..+|+.|++.|++|.+. +|++++.+++.+..... . .++.++ =+.+.
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~~~ 66 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL----------------G---VKVLVVKANVGQP 66 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT----------------T---CCEEEEECCTTCH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------------C---CcEEEEEcCCCCH
Confidence 354555 7899999999999999999985 99988877665533210 0 233333 24445
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st 109 (487)
..++.+++.+.....+=+++|+...
T Consensus 67 ~~v~~~~~~~~~~~g~id~lv~nAg 91 (258)
T 3oid_A 67 AKIKEMFQQIDETFGRLDVFVNNAA 91 (258)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5677777777665555578887764
No 480
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=94.40 E-value=0.12 Score=48.57 Aligned_cols=83 Identities=10% Similarity=0.044 Sum_probs=51.1
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.. -.. ..++..=+.+...+
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~---~~~~~~Dv~~~~~v 68 (257)
T 3tpc_A 9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----------------GAA---VRFRNADVTNEADA 68 (257)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------------------CEEEECCTTCHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----------------CCc---eEEEEccCCCHHHH
Confidence 344555 689999999999999999999999988765543211 011 23333334455567
Q ss_pred HHHHHHHhhcccCCCEEEecCCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
+.+++.+.....+=+++|+.....
T Consensus 69 ~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 69 TAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 777777666555567888876543
No 481
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.37 E-value=0.083 Score=52.69 Aligned_cols=94 Identities=21% Similarity=0.243 Sum_probs=57.9
Q ss_pred CcEEEEcccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh-hhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER-AKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+. +.. .+.-..+.+.+.+.....|+||-++.....
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~----~v~~~~~~~~~~~~~~~~D~vid~~g~~~~ 264 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD----SFLVSRDQEQMQAAAGTLDGIIDTVSAVHP 264 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS----EEEETTCHHHHHHTTTCEEEEEECCSSCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc----eEEeccCHHHHHHhhCCCCEEEECCCcHHH
Confidence 479999999999999999999999999999999988776532 211 011112222222211246788877765433
Q ss_pred HHHHHHHHhhcccCCCEEEecCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st 109 (487)
++..+ +.+.++-.++..+.
T Consensus 265 ~~~~~----~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 LLPLF----GLLKSHGKLILVGA 283 (366)
T ss_dssp SHHHH----HHEEEEEEEEECCC
T ss_pred HHHHH----HHHhcCCEEEEEcc
Confidence 33333 33344445555543
No 482
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=94.37 E-value=0.19 Score=47.46 Aligned_cols=84 Identities=14% Similarity=0.168 Sum_probs=57.1
Q ss_pred cEEEE-c-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 9 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 9 kIgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
|+.+| | .|-+|..+|+.|++.|++|++.+|++++.+++.+.... .. . .++.++ =+.+.
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--------------~~-~---~~~~~~~~Dv~~~ 82 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE--------------QF-G---TDVHTVAIDLAEP 82 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------HH-C---CCEEEEECCTTST
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--------------hc-C---CcEEEEEecCCCH
Confidence 44455 4 78999999999999999999999999887766543211 00 1 233332 24555
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++.+.....+=+++|+....
T Consensus 83 ~~v~~~~~~~~~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 83 DAPAELARRAAEAFGGLDVLVNNAGI 108 (266)
T ss_dssp THHHHHHHHHHHHHTSCSEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 67777777776665555778876654
No 483
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=94.36 E-value=0.12 Score=54.68 Aligned_cols=125 Identities=15% Similarity=0.040 Sum_probs=67.7
Q ss_pred CCcEEEEcccHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh-cCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011394 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK-EGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (487)
Q Consensus 7 ~~kIgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~-~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 84 (487)
..+|.|||+|..|..+|.+|+..|. +++++|.+.-....+.++... ....+-.-+....+.++.+ .+++-+...+..
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~i-NP~V~v~~~~~~ 404 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI-FPLMDATGVKLS 404 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHH-CTTCEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhh-CCCcEEEEeecc
Confidence 3589999999999999999999997 899999875222222211100 0000000111222222222 155555554321
Q ss_pred ---------hh--HHHHHHHHhhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011394 85 ---------AP--VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (487)
Q Consensus 85 ---------~~--v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 133 (487)
.. .....+.+...+..-++|||++-.. ..-..+...+...++.++.+.
T Consensus 405 Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~-~tR~~ln~~c~~~~~PlI~aa 463 (615)
T 4gsl_A 405 IPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSR-ESRWLPSLLSNIENKTVINAA 463 (615)
T ss_dssp CCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSG-GGTHHHHHHHHHTTCEEEEEE
T ss_pred ccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCH-HHHHHHHHHHHHcCCeEEEEE
Confidence 00 0111122334455678999987654 333345566677888888753
No 484
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=94.35 E-value=0.16 Score=48.43 Aligned_cols=82 Identities=18% Similarity=0.287 Sum_probs=54.4
Q ss_pred EEEEc-ccHHHHHHHHHHHHCCCcEEEEeC-ChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011394 10 IGLAG-LAVMGQNLALNIAEKGFPISVYNR-TTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (487)
Q Consensus 10 IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 85 (487)
+-|.| .|-+|..+|+.|++.|++|.+.++ ++++.+++.+..... . .++.++ =+.+..
T Consensus 32 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~d~~ 92 (280)
T 4da9_A 32 AIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL----------------G---ARVIFLRADLADLS 92 (280)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTSGG
T ss_pred EEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc----------------C---CcEEEEEecCCCHH
Confidence 44455 789999999999999999999985 777666555432110 1 233332 245556
Q ss_pred hHHHHHHHHhhcccCCCEEEecCCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
.++.+++.+.....+=+++|+....
T Consensus 93 ~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 93 SHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp GHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 7777777777665556788877654
No 485
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=94.33 E-value=0.03 Score=52.24 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=31.2
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHH
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSK 42 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~ 42 (487)
|++|-|.| .|.+|..+++.|++.|++|++.+|++++
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~ 37 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQAD 37 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 45688887 5999999999999999999999998754
No 486
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=94.32 E-value=0.14 Score=49.99 Aligned_cols=33 Identities=21% Similarity=0.461 Sum_probs=29.9
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCC
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRT 39 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~ 39 (487)
||+|-|.| .|.+|+.++..|++.|++|++.+|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 34 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNL 34 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCC
Confidence 56899998 7999999999999999999999985
No 487
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=94.32 E-value=0.2 Score=46.76 Aligned_cols=81 Identities=15% Similarity=0.226 Sum_probs=52.0
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCCh-HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTT-SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKA 83 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~-~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~ 83 (487)
++|-|.| .|-+|..+++.|++.|++|.+.+|++ ++.++..+.. . .++.++ =+.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------------~---~~~~~~~~Dv~~ 65 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-------------------G---RRVLTVKCDVSQ 65 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-------------------T---CCEEEEECCTTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc-------------------C---CcEEEEEeecCC
Confidence 3455665 88999999999999999999999998 6654311110 0 122222 2334
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
...++.+++.+.....+=+++|+....
T Consensus 66 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 92 (249)
T 2ew8_A 66 PGDVEAFGKQVISTFGRCDILVNNAGI 92 (249)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 445666666666555455788876654
No 488
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=94.32 E-value=0.15 Score=47.14 Aligned_cols=41 Identities=20% Similarity=0.306 Sum_probs=35.0
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (487)
++|-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR 49 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4677777 5899999999999999999999999887766544
No 489
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=94.31 E-value=0.1 Score=48.65 Aligned_cols=84 Identities=12% Similarity=0.188 Sum_probs=53.5
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cCCC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VKAG 84 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~--vp~~ 84 (487)
++|-|.| .|-+|..+++.|++.|++|++.+|++++.+.+.+..... . .++.++. +.+.
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~ 72 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL----------------G---GQAFACRCDITSE 72 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh----------------C---CceEEEEcCCCCH
Confidence 3566665 699999999999999999999999988776654432110 0 2222222 3333
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++.+.....+=++||++...
T Consensus 73 ~~~~~~~~~~~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 73 QELSALADFAISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 45556665555444445677776654
No 490
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=94.30 E-value=0.26 Score=46.30 Aligned_cols=82 Identities=12% Similarity=0.141 Sum_probs=53.7
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
+|-|.| .|-+|..+++.|++.|++|.+.+|++++.+++.+... . . ...+-.=+.+...+
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~------~---~~~~~~D~~d~~~v 73 (263)
T 3ak4_A 14 KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----------N------G---GFAVEVDVTKRASV 73 (263)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-----------T------C---CEEEECCTTCHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----------c------C---CeEEEEeCCCHHHH
Confidence 466665 7899999999999999999999999887765543210 0 1 22222223444556
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++++.....+=++||++...
T Consensus 74 ~~~~~~~~~~~g~iD~lv~~Ag~ 96 (263)
T 3ak4_A 74 DAAMQKAIDALGGFDLLCANAGV 96 (263)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 66666665544445777776653
No 491
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=94.28 E-value=0.21 Score=46.88 Aligned_cols=83 Identities=10% Similarity=0.085 Sum_probs=54.3
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 86 (487)
++|-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+... .. ...+..=+.+...
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~D~~~~~~ 65 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-----------------DA---ARYQHLDVTIEED 65 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG-----------------GG---EEEEECCTTCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----------------Cc---eeEEEecCCCHHH
Confidence 3566666 6899999999999999999999999887766543210 01 1222222334445
Q ss_pred HHHHHHHHhhcccCCCEEEecCCC
Q 011394 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
++.+++.+.....+=+++|+....
T Consensus 66 ~~~~~~~~~~~~g~iD~lv~nAg~ 89 (254)
T 1hdc_A 66 WQRVVAYAREEFGSVDGLVNNAGI 89 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 666666666555455778876654
No 492
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=94.27 E-value=0.19 Score=47.59 Aligned_cols=81 Identities=14% Similarity=0.180 Sum_probs=55.3
Q ss_pred cEEEE--cccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 9 kIgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
|+.+| |.|-+|..+|+.|++.|++|.+.+|++++.+++.+... .++.++ =+.+.
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------------------~~~~~~~~Dv~d~ 85 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG----------------------KDVFVFSANLSDR 85 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------------------SSEEEEECCTTSH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------------CceEEEEeecCCH
Confidence 44455 47899999999999999999999999988776544211 122222 23444
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
..++.+++.+.....+=+++|+.....
T Consensus 86 ~~v~~~~~~~~~~~g~iD~lvnnAg~~ 112 (266)
T 3grp_A 86 KSIKQLAEVAEREMEGIDILVNNAGIT 112 (266)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 566677766666555557888876543
No 493
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=94.27 E-value=0.098 Score=51.71 Aligned_cols=41 Identities=12% Similarity=0.352 Sum_probs=30.7
Q ss_pred CcEEEEcccHHHHHHHHHHHH---C-CCcEEEE-eC-ChHHHHHHHH
Q 011394 8 TRIGLAGLAVMGQNLALNIAE---K-GFPISVY-NR-TTSKVDETVE 48 (487)
Q Consensus 8 ~kIgiIGlG~mG~~lA~~L~~---~-G~~V~v~-dr-~~~~~~~l~~ 48 (487)
+||||+|.|++|+.+.+.|.+ + .++|... |+ +++....+.+
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~ 49 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLK 49 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhc
Confidence 599999999999999999988 4 4666644 44 4555555553
No 494
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.24 E-value=0.074 Score=47.81 Aligned_cols=40 Identities=13% Similarity=0.017 Sum_probs=35.1
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETV 47 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~ 47 (487)
++|-|+| .|.+|..+++.+...|.+|++.++++++.+.+.
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 5788999 699999999999999999999999988776554
No 495
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=94.23 E-value=0.16 Score=48.13 Aligned_cols=84 Identities=12% Similarity=0.149 Sum_probs=55.9
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 84 (487)
++|-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+..... . .++.++ =+.+.
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~Dl~~~ 92 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL----------------G---AKVHTFVVDCSNR 92 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc----------------C---CeEEEEEeeCCCH
Confidence 3566665 789999999999999999999999988776655432110 0 222222 23344
Q ss_pred hhHHHHHHHHhhcccCCCEEEecCCC
Q 011394 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (487)
..++.+++.+.....+=++||++...
T Consensus 93 ~~v~~~~~~~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 93 EDIYSSAKKVKAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCc
Confidence 45666666666555555788887654
No 496
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=94.22 E-value=0.19 Score=47.94 Aligned_cols=82 Identities=13% Similarity=0.149 Sum_probs=53.7
Q ss_pred cEEEEcc-cH--HHHHHHHHHHHCCCcEEEEeCCh--HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011394 9 RIGLAGL-AV--MGQNLALNIAEKGFPISVYNRTT--SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (487)
Q Consensus 9 kIgiIGl-G~--mG~~lA~~L~~~G~~V~v~dr~~--~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~ 83 (487)
+|-|.|. |. +|..+|+.|++.|++|.+.+|+. +.++++.+.. ....++..=+.+
T Consensus 28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~---------------------~~~~~~~~Dl~~ 86 (280)
T 3nrc_A 28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF---------------------NPAAVLPCDVIS 86 (280)
T ss_dssp EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG---------------------CCSEEEECCTTC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc---------------------CCceEEEeecCC
Confidence 4556674 56 99999999999999999999987 3333332211 012233233445
Q ss_pred ChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 84 GAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
...++.+++++.....+=+++|++....
T Consensus 87 ~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 87 DQEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 5567777777776665667888876654
No 497
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.20 E-value=0.13 Score=50.71 Aligned_cols=41 Identities=22% Similarity=0.315 Sum_probs=36.1
Q ss_pred CcEEEEc-ccHHHHHHHHHHHHC-CC-cEEEEeCChHHHHHHHH
Q 011394 8 TRIGLAG-LAVMGQNLALNIAEK-GF-PISVYNRTTSKVDETVE 48 (487)
Q Consensus 8 ~kIgiIG-lG~mG~~lA~~L~~~-G~-~V~v~dr~~~~~~~l~~ 48 (487)
++|-|.| .|.+|..+++.|++. |+ +|++++|++.+.+.+.+
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~ 65 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM 65 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH
Confidence 5799998 699999999999999 97 99999999888766654
No 498
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=94.20 E-value=0.027 Score=55.92 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=53.1
Q ss_pred CCcEEEEc-ccHHHHHHHHHHHHCCC---cEEEE-eCC-hHHHHHHHHhhhhcCCCCccccC-CHHHHHhhcCCCcEEEE
Q 011394 7 LTRIGLAG-LAVMGQNLALNIAEKGF---PISVY-NRT-TSKVDETVERAKKEGDLPLFGFR-DPESFVNSIQKPRVIIM 79 (487)
Q Consensus 7 ~~kIgiIG-lG~mG~~lA~~L~~~G~---~V~v~-dr~-~~~~~~l~~~~~~~g~~~~~~~~-s~~e~~~~l~~advIi~ 79 (487)
+|||+|+| .|.+|+.+.+.|.+.+| ++... +++ ..+.-.+. +. .+...+ ++++ .+ ++|+||+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~--g~-----~i~~~~~~~~~-~~---~~DvV~~ 74 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA--ES-----SLRVGDVDSFD-FS---SVGLAFF 74 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET--TE-----EEECEEGGGCC-GG---GCSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccC--Cc-----ceEEecCCHHH-hc---CCCEEEE
Confidence 36899999 89999999999997665 44544 432 21100000 00 111111 2222 23 3999999
Q ss_pred ecCCChhHHHHHHHHhhcccCCCEEEecCCCC
Q 011394 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (487)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (487)
|+|.. ...+.... ++..|..+||.|...
T Consensus 75 a~g~~-~s~~~a~~---~~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 75 AAAAE-VSRAHAER---ARAAGCSVIDLSGAL 102 (340)
T ss_dssp CSCHH-HHHHHHHH---HHHTTCEEEETTCTT
T ss_pred cCCcH-HHHHHHHH---HHHCCCEEEEeCCCC
Confidence 99865 23333333 345688899998765
No 499
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=94.15 E-value=0.24 Score=47.08 Aligned_cols=83 Identities=14% Similarity=0.141 Sum_probs=55.4
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cCCCh
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VKAGA 85 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~--vp~~~ 85 (487)
++-|.| .|-+|..+|+.|++.|++|.+.+|+.++.++..+.... .. . .++.++. +.+..
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~-~---~~~~~~~~Dv~~~~ 90 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG--------------AT-G---RRCLPLSMDVRAPP 90 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH--------------HH-S---SCEEEEECCTTCHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--------------hc-C---CcEEEEEcCCCCHH
Confidence 344555 67899999999999999999999998887665543210 00 1 2333332 44455
Q ss_pred hHHHHHHHHhhcccCCCEEEecCC
Q 011394 86 PVDETIKTLSAYMEKGDCIIDGGN 109 (487)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st 109 (487)
.++.+++.+.....+=+++|++..
T Consensus 91 ~v~~~~~~~~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 91 AVMAAVDQALKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCc
Confidence 667777776665555678888765
No 500
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.15 E-value=0.25 Score=46.02 Aligned_cols=80 Identities=15% Similarity=0.170 Sum_probs=53.4
Q ss_pred cEEEEc-ccHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011394 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (487)
Q Consensus 9 kIgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 87 (487)
++-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+.. . ...+..=+.+...+
T Consensus 7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------------~---~~~~~~D~~~~~~~ 64 (245)
T 1uls_A 7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------------------G---AHPVVMDVADPASV 64 (245)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------------------T---CEEEECCTTCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------------------C---CEEEEecCCCHHHH
Confidence 566666 789999999999999999999999988766554311 0 12222223344456
Q ss_pred HHHHHHHhhcccCCCEEEecCCC
Q 011394 88 DETIKTLSAYMEKGDCIIDGGNE 110 (487)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (487)
+.+++++.....+=+++|++...
T Consensus 65 ~~~~~~~~~~~g~id~lvn~Ag~ 87 (245)
T 1uls_A 65 ERGFAEALAHLGRLDGVVHYAGI 87 (245)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 66666665555455778776653
Done!