Citrus Sinensis ID: 011395

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
MASNIYPHTLACTSKTTFRCPSNSPIWTINEIAESVNGKILKWGPPGIICTDTRILAPNKNQWFFAITGQHFDAHEFISPELYGKGCVGVIGNQVCNNWDKGFVQVEGNGNVNTLNSLVNMACYARNSRFSGVLVGVTGSVGKSTTKSMIALALESLGVNVFQSYGNWNNRVGVALSLIGIDRAVDIAVLEMGMSGKGEILELARMARPEIRVVLNVGDSHLESLGSLEDVARAKGEIFQESKLGDVCVLNADDPLVANLTVPRGVRKVFFGWRRGCDVRLVAAQVANGGLGVQVVLEKEREMVKFVIPSPGLHLAINACAAAAVATLFGVSLAQVGISLSNFSPVQMRSELLVSRSGIKIVNDAYNANPISTRAAIDLLKDIACNGKRVVILGDMLELGSTERESHEKILSYCCDACIDLIGLVGDRFRAAAENMNLIKTDYIVVTNDAEILSQKIVKRLKSNDVVLVKGSRAMQMEKVVDVIKAM
ccccccccccccccccccccccccccccHHHHHHHHccCEccccccccEEEcccccccccccEEEEcccccccccccHHHHHHcccEEEEEEccccccccccEEEEccccccHHHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHccccccccEEEEEEccccccHHHHHHccccccEEEEEHHHHHHHcccccHHHHHHHHHHHHcccccccEEEECcccHHHHHHcccccccEEEEEccccccEEEEEEEEEccccEEEEEEEEccEEEEEEcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccEEEEEEcccEEEEcccccccHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHcccccccEEEcccHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHcc
***NIYPHTLACTSKTTFRCPSNSPIWTINEIAESVNGKILKWGPPGIICTDTRILAPNKNQWFFAITGQHFDAHEFISPELYGKGCVGVIGNQVCNNWDKGFVQVEGNGNVNTLNSLVNMACYARNSRFSGVLVGVTGSVGKSTTKSMIALALESLGVNVFQSYGNWNNRVGVALSLIGIDRAVDIAVLEMGMSGKGEILELARMARPEIRVVLNVGDSHLESLGSLEDVARAKGEIFQESKLGDVCVLNADDPLVANLTVPRGVRKVFFGWRRGCDVRLVAAQVANGGLGVQVVLEKEREMVKFVIPSPGLHLAINACAAAAVATLFGVSLAQVGISLSNFSPVQMRSELLVSRSGIKIVNDAYNANPISTRAAIDLLKDIACNGKRVVILGDMLELGSTERESHEKILSYCCDACIDLIGLVGDRFRAAAENMNLIKTDYIVVTNDAEILSQKIVKRLKSNDVVLVKGSRAMQMEKVVDVIKAM
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MASNIYPHTLACTSKTTFRCPSNSPIWTINEIAESVNGKILKWGPPGIICTDTRILAPNKNQWFFAITGQHFDAHEFISPELYGKGCVGVIGNQVCNNWDKGFVQVEGNGNVNTLNSLVNMACYARNSRFSGVLVGVTGSVGKSTTKSMIALALESLGVNVFQSYGNWNNRVGVALSLIGIDRAVDIAVLEMGMSGKGEILELARMARPEIRVVLNVGDSHLESLGSLEDVARAKGEIFQESKLGDVCVLNADDPLVANLTVPRGVRKVFFGWRRGCDVRLVAAQVANGGLGVQVVLEKEREMVKFVIPSPGLHLAINACAAAAVATLFGVSLAQVGISLSNFSPVQMRSELLVSRSGIKIVNDAYNANPISTRAAIDLLKDIACNGKRVVILGDMLELGSTERESHEKILSYCCDACIDLIGLVGDRFRAAAENMNLIKTDYIVVTNDAEILSQKIVKRLKSNDVVLVKGSRAMQMEKVVDVIKAM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.probableP96613

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.3.-.-Forming carbon-nitrogen bonds.probable
6.3.2.-Acid--D-amino-acid ligases (peptide synthases).probable
6.3.2.10UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GG4, chain A
Confidence level:very confident
Coverage over the Query: 27-485
View the alignment between query and template
View the model in PyMOL
Template: 2WTZ, chain A
Confidence level:very confident
Coverage over the Query: 18-474
View the alignment between query and template
View the model in PyMOL