Query 011396
Match_columns 487
No_of_seqs 124 out of 1450
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 07:17:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011396.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011396hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.8E-67 1.7E-71 528.7 37.4 433 10-480 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 4.7E-64 1.6E-68 515.2 44.1 462 11-481 6-469 (480)
3 2acv_A Triterpene UDP-glucosyl 100.0 9.9E-60 3.4E-64 481.3 38.2 438 11-480 9-462 (463)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2E-59 6.7E-64 482.4 35.8 439 10-482 7-480 (482)
5 2c1x_A UDP-glucose flavonoid 3 100.0 3.3E-59 1.1E-63 476.2 36.3 433 10-481 6-452 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.4E-42 4.7E-47 352.3 32.5 397 8-479 9-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 9.6E-44 3.3E-48 357.9 21.5 348 10-460 21-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.3E-40 7.9E-45 334.9 28.1 353 12-459 1-383 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 4.7E-39 1.6E-43 325.4 27.4 363 12-475 1-395 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 4.5E-38 1.5E-42 318.1 30.0 381 9-479 18-412 (415)
11 2yjn_A ERYCIII, glycosyltransf 100.0 1.7E-37 5.7E-42 316.5 30.1 373 9-478 18-433 (441)
12 3ia7_A CALG4; glycosysltransfe 100.0 4.9E-37 1.7E-41 308.9 32.5 383 10-481 3-399 (402)
13 3h4t_A Glycosyltransferase GTF 100.0 2.2E-38 7.5E-43 319.1 18.2 359 12-480 1-382 (404)
14 2p6p_A Glycosyl transferase; X 100.0 1.4E-35 4.8E-40 296.7 33.7 351 12-476 1-375 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.7E-35 5.7E-40 300.7 31.2 380 9-477 5-396 (430)
16 4fzr_A SSFS6; structural genom 100.0 7.7E-35 2.6E-39 292.8 24.7 345 9-460 13-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 4.8E-34 1.6E-38 287.0 27.4 349 9-475 18-392 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.1E-32 7.3E-37 274.2 29.3 356 12-476 2-384 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 5.8E-31 2E-35 265.6 28.6 362 9-479 18-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 3.4E-29 1.1E-33 248.2 24.8 310 11-441 2-324 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 8.6E-27 2.9E-31 205.4 12.8 162 265-459 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 4E-19 1.4E-23 175.7 26.7 338 12-482 7-357 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 1.4E-15 4.6E-20 137.5 7.9 147 276-438 25-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 5E-13 1.7E-17 125.8 17.1 117 279-421 157-275 (282)
25 3c48_A Predicted glycosyltrans 99.3 9.3E-10 3.2E-14 111.0 28.2 113 351-483 306-426 (438)
26 3okp_A GDP-mannose-dependent a 99.3 1.2E-09 4E-14 108.4 27.3 350 8-483 1-380 (394)
27 3ot5_A UDP-N-acetylglucosamine 99.3 6.8E-11 2.3E-15 118.0 17.0 108 351-479 282-392 (403)
28 3dzc_A UDP-N-acetylglucosamine 99.3 1.1E-10 3.9E-15 116.2 17.8 335 8-452 22-375 (396)
29 2jjm_A Glycosyl transferase, g 99.2 2.5E-08 8.5E-13 99.0 31.7 116 351-484 267-387 (394)
30 1v4v_A UDP-N-acetylglucosamine 99.2 3.8E-10 1.3E-14 111.5 16.9 85 351-452 255-342 (376)
31 1vgv_A UDP-N-acetylglucosamine 99.2 6.1E-11 2.1E-15 117.5 10.3 83 351-450 263-348 (384)
32 2r60_A Glycosyl transferase, g 99.2 6.7E-09 2.3E-13 106.7 25.9 115 351-483 335-460 (499)
33 2gek_A Phosphatidylinositol ma 99.2 9.2E-09 3.1E-13 102.4 25.0 115 350-483 262-384 (406)
34 3fro_A GLGA glycogen synthase; 99.1 3.6E-08 1.2E-12 99.0 28.3 112 351-483 311-431 (439)
35 3beo_A UDP-N-acetylglucosamine 99.0 1.8E-09 6.1E-14 106.5 14.0 83 351-450 263-348 (375)
36 4hwg_A UDP-N-acetylglucosamine 99.0 8.1E-10 2.8E-14 109.3 9.6 320 11-442 9-343 (385)
37 2iw1_A Lipopolysaccharide core 99.0 5.7E-07 2E-11 88.2 28.4 135 280-451 196-344 (374)
38 2iuy_A Avigt4, glycosyltransfe 98.9 4.5E-08 1.5E-12 95.2 19.4 125 282-440 164-307 (342)
39 2x6q_A Trehalose-synthase TRET 98.7 1.7E-06 5.9E-11 86.3 23.9 112 350-482 292-414 (416)
40 3s28_A Sucrose synthase 1; gly 98.5 8.7E-06 3E-10 87.4 20.5 80 351-442 640-735 (816)
41 2qzs_A Glycogen synthase; glyc 98.5 3E-05 1E-09 79.0 23.7 113 351-484 347-478 (485)
42 1rzu_A Glycogen synthase 1; gl 98.4 2.4E-05 8.1E-10 79.7 22.5 113 351-484 346-477 (485)
43 2xci_A KDO-transferase, 3-deox 98.3 8.1E-05 2.8E-09 73.1 22.8 97 352-459 261-364 (374)
44 3oy2_A Glycosyltransferase B73 98.3 8.8E-05 3E-09 73.6 22.0 111 353-483 256-391 (413)
45 2vsy_A XCC0866; transferase, g 98.3 0.00037 1.3E-08 72.4 27.5 120 351-483 434-560 (568)
46 2f9f_A First mannosyl transfer 98.2 9.8E-06 3.4E-10 70.6 10.2 130 281-442 24-163 (177)
47 2hy7_A Glucuronosyltransferase 98.0 0.00074 2.5E-08 67.0 21.9 74 351-442 265-353 (406)
48 3qhp_A Type 1 capsular polysac 97.5 0.00064 2.2E-08 57.9 10.4 140 280-455 2-155 (166)
49 2bfw_A GLGA glycogen synthase; 97.4 0.0019 6.6E-08 56.7 12.6 78 352-442 96-182 (200)
50 3vue_A GBSS-I, granule-bound s 97.2 0.15 5.1E-06 52.2 25.4 83 351-440 382-476 (536)
51 4gyw_A UDP-N-acetylglucosamine 96.8 0.021 7.2E-07 60.8 16.1 134 278-441 521-668 (723)
52 3q3e_A HMW1C-like glycosyltran 96.8 0.0076 2.6E-07 62.0 11.9 144 280-451 441-595 (631)
53 3tov_A Glycosyl transferase fa 96.6 0.088 3E-06 50.7 17.6 106 10-144 7-115 (349)
54 3rhz_A GTF3, nucleotide sugar 96.6 0.0034 1.2E-07 60.4 7.2 96 352-460 215-322 (339)
55 1psw_A ADP-heptose LPS heptosy 96.4 0.12 4.3E-06 49.4 17.2 105 12-145 1-107 (348)
56 2x0d_A WSAF; GT4 family, trans 93.4 0.16 5.4E-06 50.1 7.6 84 351-450 295-385 (413)
57 2gt1_A Lipopolysaccharide hept 88.1 0.2 6.9E-06 47.5 2.3 131 279-441 178-322 (326)
58 2wqk_A 5'-nucleotidase SURE; S 84.9 4.2 0.00014 36.7 9.1 37 11-50 1-37 (251)
59 2phj_A 5'-nucleotidase SURE; S 84.3 4.4 0.00015 36.5 8.8 36 12-50 2-37 (251)
60 3t5t_A Putative glycosyltransf 79.7 52 0.0018 32.8 21.7 110 352-482 353-473 (496)
61 1g5t_A COB(I)alamin adenosyltr 77.6 22 0.00076 30.6 10.7 104 11-129 28-131 (196)
62 4dim_A Phosphoribosylglycinami 74.2 10 0.00035 36.7 8.8 36 8-49 4-39 (403)
63 4dzz_A Plasmid partitioning pr 70.1 24 0.00083 29.9 9.4 37 13-50 3-40 (206)
64 3vot_A L-amino acid ligase, BL 70.0 12 0.00041 36.5 8.2 33 110-142 67-101 (425)
65 3zqu_A Probable aromatic acid 68.9 5.5 0.00019 34.8 4.7 39 10-50 3-41 (209)
66 2x0d_A WSAF; GT4 family, trans 68.0 2.7 9.2E-05 41.2 2.9 40 10-50 45-89 (413)
67 1uqt_A Alpha, alpha-trehalose- 67.5 26 0.00088 34.9 10.1 109 353-482 333-454 (482)
68 3lyu_A Putative hydrogenase; t 67.5 15 0.00053 29.6 7.1 35 12-50 19-53 (142)
69 3nb0_A Glycogen [starch] synth 66.6 17 0.00058 37.9 8.5 43 355-399 497-552 (725)
70 2iz6_A Molybdenum cofactor car 66.1 11 0.00039 31.8 6.1 78 354-440 92-173 (176)
71 3dfz_A SIRC, precorrin-2 dehyd 65.7 45 0.0015 29.3 10.1 155 272-461 26-186 (223)
72 3bgw_A DNAB-like replicative h 64.7 15 0.00051 36.2 7.6 37 13-50 199-235 (444)
73 3enk_A UDP-glucose 4-epimerase 64.2 78 0.0027 29.1 12.5 34 11-49 5-38 (341)
74 3l7i_A Teichoic acid biosynthe 63.9 8.2 0.00028 40.8 5.9 114 355-482 603-721 (729)
75 4a1f_A DNAB helicase, replicat 63.7 54 0.0019 30.8 11.0 37 13-50 48-84 (338)
76 2ywr_A Phosphoribosylglycinami 60.9 39 0.0013 29.5 8.8 34 12-49 2-37 (216)
77 1ccw_A Protein (glutamate muta 58.3 13 0.00046 29.8 5.0 38 11-49 3-40 (137)
78 1j9j_A Stationary phase surviV 56.5 39 0.0013 30.2 8.1 35 13-50 2-36 (247)
79 3qjg_A Epidermin biosynthesis 54.3 15 0.00051 31.0 4.7 38 11-50 5-42 (175)
80 2v4n_A Multifunctional protein 54.1 43 0.0015 30.0 8.0 36 12-50 2-37 (254)
81 2q6t_A DNAB replication FORK h 53.8 17 0.00056 35.8 5.7 38 13-50 202-239 (444)
82 2ejb_A Probable aromatic acid 53.6 17 0.00059 31.0 5.1 37 12-50 2-38 (189)
83 3auf_A Glycinamide ribonucleot 53.5 89 0.003 27.4 9.9 116 4-148 15-132 (229)
84 3dm5_A SRP54, signal recogniti 52.7 45 0.0015 32.7 8.5 39 11-50 100-138 (443)
85 3u7q_A Nitrogenase molybdenum- 52.5 76 0.0026 31.6 10.4 32 106-144 409-440 (492)
86 2lnd_A De novo designed protei 52.5 12 0.00042 26.5 3.1 49 388-440 50-100 (112)
87 1l5x_A SurviVal protein E; str 52.1 53 0.0018 29.9 8.3 35 13-50 2-36 (280)
88 3mc3_A DSRE/DSRF-like family p 52.0 21 0.00073 28.4 5.2 38 12-50 16-56 (134)
89 1id1_A Putative potassium chan 51.1 11 0.00039 30.6 3.5 34 10-49 2-35 (153)
90 2i2c_A Probable inorganic poly 49.9 9 0.00031 35.0 2.9 51 371-441 37-93 (272)
91 1kjn_A MTH0777; hypotethical p 49.5 14 0.00048 30.0 3.5 30 20-50 17-46 (157)
92 3mcu_A Dipicolinate synthase, 49.5 17 0.00057 31.6 4.4 38 11-50 5-43 (207)
93 1p3y_1 MRSD protein; flavoprot 49.1 12 0.0004 32.3 3.3 40 9-50 6-45 (194)
94 1q57_A DNA primase/helicase; d 49.0 81 0.0028 31.3 10.1 38 13-50 244-281 (503)
95 3lqk_A Dipicolinate synthase s 48.7 18 0.00062 31.3 4.4 38 11-50 7-45 (201)
96 2r8r_A Sensor protein; KDPD, P 48.4 20 0.0007 31.6 4.8 39 11-50 6-44 (228)
97 2r6a_A DNAB helicase, replicat 48.0 28 0.00094 34.3 6.3 39 12-50 204-242 (454)
98 3pdi_A Nitrogenase MOFE cofact 47.4 70 0.0024 31.8 9.2 25 117-144 400-424 (483)
99 1xp8_A RECA protein, recombina 46.8 43 0.0015 31.9 7.2 37 13-50 76-112 (366)
100 3av3_A Phosphoribosylglycinami 46.7 1.3E+02 0.0045 25.9 9.9 109 11-148 3-113 (212)
101 2vqe_B 30S ribosomal protein S 46.5 1.1E+02 0.0037 27.4 9.3 31 117-147 157-189 (256)
102 3m1a_A Putative dehydrogenase; 46.5 1.4E+02 0.0048 26.6 10.6 33 13-49 6-38 (281)
103 1yt5_A Inorganic polyphosphate 45.8 12 0.00041 33.8 3.0 53 367-441 41-96 (258)
104 3pdi_B Nitrogenase MOFE cofact 44.8 1.3E+02 0.0044 29.6 10.5 32 106-144 367-398 (458)
105 2yxb_A Coenzyme B12-dependent 44.0 18 0.00063 29.9 3.6 39 10-49 17-55 (161)
106 2yrx_A Phosphoribosylglycinami 43.4 78 0.0027 30.9 8.8 35 10-49 20-54 (451)
107 2pju_A Propionate catabolism o 43.0 22 0.00074 31.4 4.1 29 370-399 64-92 (225)
108 2q5c_A NTRC family transcripti 42.9 16 0.00055 31.4 3.2 30 369-399 51-80 (196)
109 1ydh_A AT5G11950; structural g 42.8 48 0.0016 28.9 6.3 27 371-397 108-143 (216)
110 3hr8_A Protein RECA; alpha and 42.4 52 0.0018 31.2 7.0 37 13-50 63-99 (356)
111 3icc_A Putative 3-oxoacyl-(acy 42.1 1.6E+02 0.0056 25.5 10.2 34 12-49 7-40 (255)
112 1y80_A Predicted cobalamin bin 42.1 28 0.00095 30.1 4.7 39 11-50 88-126 (210)
113 3bbn_B Ribosomal protein S2; s 41.8 1.1E+02 0.0037 27.0 8.4 29 118-146 157-187 (231)
114 2i2x_B MTAC, methyltransferase 40.7 38 0.0013 30.4 5.5 40 10-50 122-161 (258)
115 3ouz_A Biotin carboxylase; str 40.3 40 0.0014 33.0 6.1 33 11-49 6-38 (446)
116 3kcq_A Phosphoribosylglycinami 40.1 49 0.0017 28.8 5.9 41 7-50 4-45 (215)
117 3da8_A Probable 5'-phosphoribo 39.4 91 0.0031 27.1 7.5 110 9-148 10-120 (215)
118 2gt1_A Lipopolysaccharide hept 39.2 84 0.0029 28.9 8.0 39 12-50 1-40 (326)
119 1o97_C Electron transferring f 38.8 31 0.0011 31.2 4.6 30 118-147 112-147 (264)
120 1mvl_A PPC decarboxylase athal 38.3 37 0.0013 29.5 4.8 37 11-50 19-55 (209)
121 3ezx_A MMCP 1, monomethylamine 38.3 37 0.0013 29.6 4.9 40 10-50 91-130 (215)
122 1efv_B Electron transfer flavo 38.2 33 0.0011 30.9 4.6 30 118-147 116-151 (255)
123 1psw_A ADP-heptose LPS heptosy 37.9 2.1E+02 0.0072 26.2 10.7 38 12-50 181-223 (348)
124 2dzd_A Pyruvate carboxylase; b 37.7 63 0.0022 31.6 7.1 34 11-50 6-39 (461)
125 3lp8_A Phosphoribosylamine-gly 37.6 30 0.001 33.9 4.7 36 9-49 19-54 (442)
126 3ty2_A 5'-nucleotidase SURE; s 37.5 45 0.0015 30.0 5.3 38 10-50 10-47 (261)
127 3qha_A Putative oxidoreductase 37.5 17 0.00057 33.5 2.6 37 7-49 11-47 (296)
128 3gk3_A Acetoacetyl-COA reducta 37.3 1.1E+02 0.0037 27.2 8.2 36 10-49 23-58 (269)
129 1g63_A Epidermin modifying enz 36.7 26 0.0009 29.7 3.5 37 12-50 3-39 (181)
130 1qzu_A Hypothetical protein MD 36.5 31 0.0011 29.9 4.0 39 10-50 18-57 (206)
131 1efp_B ETF, protein (electron 36.5 33 0.0011 30.8 4.3 30 118-147 113-148 (252)
132 1sbz_A Probable aromatic acid 36.4 35 0.0012 29.3 4.3 37 13-50 2-38 (197)
133 2qk4_A Trifunctional purine bi 35.2 1.1E+02 0.0038 29.7 8.5 35 11-50 24-58 (452)
134 2l82_A Designed protein OR32; 35.1 70 0.0024 24.1 5.1 34 281-318 3-36 (162)
135 3h75_A Periplasmic sugar-bindi 35.1 2.1E+02 0.0071 26.3 10.1 38 110-147 53-94 (350)
136 3ezl_A Acetoacetyl-COA reducta 35.0 2.1E+02 0.0071 24.9 9.7 34 11-48 12-45 (256)
137 3g1w_A Sugar ABC transporter; 34.8 2.4E+02 0.0083 25.0 10.8 29 118-146 61-93 (305)
138 4e3z_A Putative oxidoreductase 33.7 1.2E+02 0.0041 26.9 7.9 34 11-48 25-58 (272)
139 1u94_A RECA protein, recombina 33.7 77 0.0026 30.0 6.7 37 13-50 65-101 (356)
140 3eag_A UDP-N-acetylmuramate:L- 33.7 42 0.0014 31.3 4.8 32 11-47 4-35 (326)
141 3fwz_A Inner membrane protein 33.6 25 0.00086 28.0 2.8 34 11-50 7-40 (140)
142 3lrx_A Putative hydrogenase; a 33.5 41 0.0014 27.5 4.2 35 12-50 24-58 (158)
143 1bg6_A N-(1-D-carboxylethyl)-L 33.5 30 0.001 32.6 3.8 35 9-49 2-36 (359)
144 3s2u_A UDP-N-acetylglucosamine 33.2 38 0.0013 32.1 4.5 37 280-318 4-40 (365)
145 2qs7_A Uncharacterized protein 33.1 55 0.0019 26.3 4.8 36 14-50 11-46 (144)
146 2lpm_A Two-component response 32.7 29 0.00098 27.2 2.9 31 115-145 50-85 (123)
147 4b4o_A Epimerase family protei 32.3 41 0.0014 30.5 4.5 32 12-48 1-32 (298)
148 3va7_A KLLA0E08119P; carboxyla 32.1 82 0.0028 35.4 7.4 38 7-50 27-64 (1236)
149 3ppi_A 3-hydroxyacyl-COA dehyd 31.9 1.6E+02 0.0054 26.2 8.4 34 12-49 30-63 (281)
150 2zts_A Putative uncharacterize 31.9 1.4E+02 0.0049 25.7 8.0 38 13-50 32-69 (251)
151 4g6h_A Rotenone-insensitive NA 31.9 31 0.0011 34.5 3.7 36 9-50 40-75 (502)
152 3llv_A Exopolyphosphatase-rela 31.8 26 0.00088 27.8 2.6 34 11-50 6-39 (141)
153 1z45_A GAL10 bifunctional prot 31.5 3.5E+02 0.012 27.9 12.0 34 11-49 11-44 (699)
154 3tov_A Glycosyl transferase fa 31.4 3.1E+02 0.011 25.4 10.7 38 12-50 186-227 (349)
155 2b8t_A Thymidine kinase; deoxy 31.4 98 0.0033 27.0 6.5 37 13-50 13-50 (223)
156 4hb9_A Similarities with proba 31.3 33 0.0011 32.6 3.8 29 12-46 2-30 (412)
157 3alj_A 2-methyl-3-hydroxypyrid 31.2 34 0.0012 32.5 3.8 42 1-48 1-42 (379)
158 4iin_A 3-ketoacyl-acyl carrier 31.2 1.8E+02 0.0061 25.7 8.6 34 12-49 29-62 (271)
159 2ip4_A PURD, phosphoribosylami 31.0 2.3E+02 0.0079 27.0 9.9 32 13-49 2-33 (417)
160 3o26_A Salutaridine reductase; 30.5 48 0.0016 30.1 4.6 35 11-49 11-45 (311)
161 3gl9_A Response regulator; bet 30.2 81 0.0028 23.7 5.3 34 115-148 43-85 (122)
162 3u5t_A 3-oxoacyl-[acyl-carrier 29.9 1.7E+02 0.006 25.9 8.2 33 12-48 27-59 (267)
163 3tqr_A Phosphoribosylglycinami 29.7 1.8E+02 0.0062 25.1 7.9 37 11-50 5-41 (215)
164 3qvl_A Putative hydantoin race 29.7 2.9E+02 0.0099 24.3 10.6 38 12-50 2-40 (245)
165 2xcl_A Phosphoribosylamine--gl 29.6 98 0.0034 29.7 6.9 32 13-49 2-33 (422)
166 3rd5_A Mypaa.01249.C; ssgcid, 29.4 2.4E+02 0.0081 25.2 9.2 34 12-49 16-49 (291)
167 3h7a_A Short chain dehydrogena 29.1 1.8E+02 0.0061 25.5 8.1 33 13-49 8-40 (252)
168 3u7q_B Nitrogenase molybdenum- 28.9 4.4E+02 0.015 26.2 11.8 34 11-50 364-397 (523)
169 4ep4_A Crossover junction endo 28.9 72 0.0025 26.5 4.9 48 100-151 49-111 (166)
170 3osu_A 3-oxoacyl-[acyl-carrier 28.8 2E+02 0.0067 25.0 8.3 32 13-48 5-36 (246)
171 3dhn_A NAD-dependent epimerase 28.8 53 0.0018 28.2 4.4 34 11-49 4-37 (227)
172 3kjh_A CO dehydrogenase/acetyl 28.7 38 0.0013 29.6 3.5 37 13-50 2-38 (254)
173 4dqx_A Probable oxidoreductase 28.7 2.8E+02 0.0094 24.7 9.4 34 12-49 27-60 (277)
174 3s40_A Diacylglycerol kinase; 28.6 66 0.0023 29.6 5.2 26 372-397 66-97 (304)
175 2w70_A Biotin carboxylase; lig 28.4 85 0.0029 30.5 6.3 33 11-49 2-34 (449)
176 3n7t_A Macrophage binding prot 28.3 1E+02 0.0034 27.4 6.1 39 11-50 9-58 (247)
177 2g1u_A Hypothetical protein TM 28.1 63 0.0021 26.0 4.5 35 10-50 18-52 (155)
178 3lac_A Pyrrolidone-carboxylate 27.8 42 0.0014 29.3 3.4 26 11-36 1-28 (215)
179 3qvo_A NMRA family protein; st 27.7 47 0.0016 28.9 3.9 36 9-49 21-57 (236)
180 1p9o_A Phosphopantothenoylcyst 27.6 40 0.0014 31.3 3.4 36 14-50 40-89 (313)
181 3nrb_A Formyltetrahydrofolate 27.5 2.8E+02 0.0095 25.2 9.1 104 297-439 154-259 (287)
182 3edm_A Short chain dehydrogena 27.5 3.1E+02 0.011 23.9 9.5 32 13-48 9-40 (259)
183 1u0t_A Inorganic polyphosphate 27.5 25 0.00084 32.6 2.0 32 364-397 72-107 (307)
184 3zv4_A CIS-2,3-dihydrobiphenyl 27.4 3.1E+02 0.01 24.4 9.5 33 13-49 6-38 (281)
185 3grp_A 3-oxoacyl-(acyl carrier 27.4 2.8E+02 0.0097 24.4 9.2 34 12-49 27-60 (266)
186 2zr9_A Protein RECA, recombina 27.4 1.3E+02 0.0045 28.2 7.1 37 13-50 63-99 (349)
187 4grd_A N5-CAIR mutase, phospho 27.4 2.7E+02 0.0091 23.1 8.3 37 10-48 11-49 (173)
188 3gvc_A Oxidoreductase, probabl 27.3 3.3E+02 0.011 24.2 9.9 33 13-49 30-62 (277)
189 2an1_A Putative kinase; struct 27.2 27 0.00091 32.0 2.1 28 367-396 63-94 (292)
190 3o1l_A Formyltetrahydrofolate 27.2 3.6E+02 0.012 24.6 9.8 106 295-439 168-275 (302)
191 3fet_A Electron transfer flavo 27.2 93 0.0032 25.7 5.3 39 107-147 60-101 (166)
192 4eg0_A D-alanine--D-alanine li 26.9 83 0.0028 28.9 5.6 38 11-49 13-54 (317)
193 3tpc_A Short chain alcohol deh 26.8 3E+02 0.01 23.9 9.2 33 13-49 8-40 (257)
194 3i4f_A 3-oxoacyl-[acyl-carrier 26.8 1.1E+02 0.0036 27.1 6.1 34 12-49 7-40 (264)
195 3cmw_A Protein RECA, recombina 26.8 1.7E+02 0.0057 34.1 8.8 37 13-50 385-421 (1706)
196 1qkk_A DCTD, C4-dicarboxylate 26.8 1.5E+02 0.0052 23.1 6.7 48 388-441 74-121 (155)
197 3giu_A Pyrrolidone-carboxylate 26.6 74 0.0025 27.7 4.8 26 11-36 3-30 (215)
198 3oid_A Enoyl-[acyl-carrier-pro 26.5 2.2E+02 0.0074 25.0 8.2 32 13-48 5-36 (258)
199 3mjf_A Phosphoribosylamine--gl 26.5 1.3E+02 0.0046 29.0 7.2 32 11-48 3-35 (431)
200 4gi5_A Quinone reductase; prot 26.3 96 0.0033 28.2 5.7 43 4-47 16-60 (280)
201 3rg8_A Phosphoribosylaminoimid 26.2 2.7E+02 0.0092 22.8 9.5 137 280-460 3-148 (159)
202 3ro0_A Pyrrolidone-carboxylate 26.1 56 0.0019 28.6 3.9 26 11-36 2-29 (223)
203 4e12_A Diketoreductase; oxidor 26.0 57 0.0019 29.6 4.2 34 9-48 2-35 (283)
204 1q1v_A DEK protein; winged-hel 25.9 1.6E+02 0.0056 20.3 5.5 53 424-478 10-64 (70)
205 1qgu_B Protein (nitrogenase mo 25.8 5E+02 0.017 25.8 12.3 34 11-50 360-393 (519)
206 1evy_A Glycerol-3-phosphate de 25.7 36 0.0012 32.2 2.8 32 12-49 16-47 (366)
207 4dgk_A Phytoene dehydrogenase; 25.7 27 0.00094 34.6 2.1 32 11-48 1-32 (501)
208 3obb_A Probable 3-hydroxyisobu 25.7 69 0.0024 29.4 4.7 31 11-47 3-33 (300)
209 1eiw_A Hypothetical protein MT 25.7 94 0.0032 23.8 4.7 65 365-440 36-109 (111)
210 3obi_A Formyltetrahydrofolate 25.2 3E+02 0.01 25.0 8.8 104 297-439 155-260 (288)
211 3rp8_A Flavoprotein monooxygen 25.0 50 0.0017 31.6 3.8 34 9-48 21-54 (407)
212 1jkx_A GART;, phosphoribosylgl 24.7 3.3E+02 0.011 23.3 10.6 108 12-148 1-110 (212)
213 1f0y_A HCDH, L-3-hydroxyacyl-C 24.6 44 0.0015 30.6 3.2 33 11-49 15-47 (302)
214 3doj_A AT3G25530, dehydrogenas 24.4 64 0.0022 29.7 4.2 35 9-49 19-53 (310)
215 2qv7_A Diacylglycerol kinase D 24.4 58 0.002 30.5 4.0 26 372-397 83-114 (337)
216 4hps_A Pyrrolidone-carboxylate 24.2 51 0.0018 29.0 3.3 27 11-37 23-51 (228)
217 2ew2_A 2-dehydropantoate 2-red 24.2 53 0.0018 30.0 3.7 33 11-49 3-35 (316)
218 2rh8_A Anthocyanidin reductase 24.1 72 0.0025 29.4 4.6 41 1-48 1-41 (338)
219 4egb_A DTDP-glucose 4,6-dehydr 24.0 4.1E+02 0.014 24.1 10.0 32 11-47 24-57 (346)
220 3n74_A 3-ketoacyl-(acyl-carrie 23.9 3.5E+02 0.012 23.4 9.3 34 12-49 9-42 (261)
221 3qua_A Putative uncharacterize 23.8 95 0.0033 26.6 4.8 26 372-397 121-155 (199)
222 2q5c_A NTRC family transcripti 23.7 39 0.0013 29.0 2.3 42 104-149 129-170 (196)
223 3ic5_A Putative saccharopine d 23.6 71 0.0024 23.8 3.8 33 11-49 5-38 (118)
224 3lou_A Formyltetrahydrofolate 23.6 3.3E+02 0.011 24.7 8.8 104 297-439 160-265 (292)
225 1cp2_A CP2, nitrogenase iron p 23.5 66 0.0023 28.6 4.1 38 12-50 2-39 (269)
226 2vpq_A Acetyl-COA carboxylase; 23.3 1.2E+02 0.004 29.5 6.2 32 12-49 2-33 (451)
227 3r6d_A NAD-dependent epimerase 23.2 79 0.0027 27.0 4.4 21 28-49 18-39 (221)
228 3kkl_A Probable chaperone prot 23.1 1.3E+02 0.0043 26.7 5.8 39 11-50 3-52 (244)
229 2ixd_A LMBE-related protein; h 22.8 2.4E+02 0.0083 24.8 7.6 33 13-47 6-38 (242)
230 3n0v_A Formyltetrahydrofolate 22.8 3.8E+02 0.013 24.2 9.0 104 297-439 155-260 (286)
231 2etv_A Iron(III) ABC transport 22.7 76 0.0026 29.7 4.5 28 118-145 96-124 (346)
232 4hn9_A Iron complex transport 22.7 62 0.0021 30.1 3.8 29 118-146 116-144 (335)
233 3tzq_B Short-chain type dehydr 22.6 3.9E+02 0.013 23.4 10.2 34 12-49 11-44 (271)
234 1hjr_A Holliday junction resol 22.6 73 0.0025 26.2 3.7 46 102-151 47-107 (158)
235 2hy5_A Putative sulfurtransfer 22.5 1.1E+02 0.0039 23.8 4.8 36 14-50 4-42 (130)
236 2xj4_A MIPZ; replication, cell 22.4 77 0.0026 28.6 4.3 35 14-49 7-42 (286)
237 3is3_A 17BETA-hydroxysteroid d 22.4 3.2E+02 0.011 24.0 8.6 34 12-49 18-51 (270)
238 3tl3_A Short-chain type dehydr 22.4 3.5E+02 0.012 23.5 8.8 33 12-48 9-41 (257)
239 3of5_A Dethiobiotin synthetase 22.3 84 0.0029 27.4 4.4 36 11-47 4-40 (228)
240 3cky_A 2-hydroxymethyl glutara 22.2 88 0.003 28.3 4.8 33 10-48 3-35 (301)
241 1a2z_A Pyrrolidone carboxyl pe 22.2 1.2E+02 0.004 26.5 5.2 26 12-37 2-29 (220)
242 2pk3_A GDP-6-deoxy-D-LYXO-4-he 22.2 66 0.0022 29.4 3.9 33 14-50 14-46 (321)
243 4dyv_A Short-chain dehydrogena 22.2 3.7E+02 0.013 23.7 9.0 34 12-49 28-61 (272)
244 1lss_A TRK system potassium up 22.2 72 0.0025 24.6 3.7 32 12-49 5-36 (140)
245 3o1l_A Formyltetrahydrofolate 22.2 4E+02 0.014 24.3 9.1 38 10-50 104-142 (302)
246 4dll_A 2-hydroxy-3-oxopropiona 22.1 97 0.0033 28.6 5.0 34 10-49 30-63 (320)
247 3dii_A Short-chain dehydrogena 22.1 3.8E+02 0.013 23.1 9.9 33 13-49 3-35 (247)
248 4eso_A Putative oxidoreductase 22.0 3E+02 0.01 24.0 8.2 33 13-49 9-41 (255)
249 4dmm_A 3-oxoacyl-[acyl-carrier 21.8 3.2E+02 0.011 24.1 8.4 33 12-48 28-60 (269)
250 2zqe_A MUTS2 protein; alpha/be 21.8 52 0.0018 23.7 2.4 56 297-382 21-77 (83)
251 2hq1_A Glucose/ribitol dehydro 21.4 3.8E+02 0.013 22.8 9.1 30 14-47 7-36 (247)
252 3tqr_A Phosphoribosylglycinami 21.4 3.9E+02 0.013 23.0 8.9 103 297-438 72-176 (215)
253 3goc_A Endonuclease V; alpha-b 21.3 91 0.0031 27.5 4.2 39 104-144 95-140 (237)
254 3ijr_A Oxidoreductase, short c 21.3 2.8E+02 0.0095 24.8 8.0 33 13-49 48-80 (291)
255 3ruf_A WBGU; rossmann fold, UD 21.1 4.7E+02 0.016 23.7 12.0 34 11-49 25-58 (351)
256 3kcq_A Phosphoribosylglycinami 20.9 4E+02 0.014 22.9 9.0 103 298-439 72-176 (215)
257 3tl4_X Glutaminyl-tRNA synthet 20.9 1.4E+02 0.0048 25.2 5.2 65 403-477 103-175 (187)
258 2pzm_A Putative nucleotide sug 20.8 1.1E+02 0.0039 27.9 5.3 34 10-48 19-52 (330)
259 3i83_A 2-dehydropantoate 2-red 20.8 79 0.0027 29.2 4.1 33 12-50 3-35 (320)
260 3rot_A ABC sugar transporter, 20.7 4.3E+02 0.015 23.2 9.9 29 118-146 61-93 (297)
261 3ci9_A Heat shock factor-bindi 20.4 39 0.0013 21.6 1.2 31 427-462 3-33 (48)
262 3hn2_A 2-dehydropantoate 2-red 20.3 76 0.0026 29.2 3.8 32 12-49 3-34 (312)
263 2q37_A OHCU decarboxylase; 2-O 20.2 1.7E+02 0.0058 24.6 5.6 55 401-459 117-171 (181)
264 2bon_A Lipid kinase; DAG kinas 20.2 87 0.003 29.2 4.2 81 278-397 30-118 (332)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.8e-67 Score=528.71 Aligned_cols=433 Identities=25% Similarity=0.381 Sum_probs=347.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCC--CEEEEEeCCCCCCCCCCCchhhhhhhcC---CCCceEEeCCCCCCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHN--FLVTIFIPTIDDGTGSSMEPQRQVLESL---PTSISTIFLPPVSFDD 84 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~G--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~ 84 (487)
.++||+++|+|++||++||+.||+.|+++ | |.|||++++. ....+.... +.+++|..+++.-.++
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~-g~~~~vT~~~t~~---------~~~~~~~~~~~~~~~i~~~~ipdglp~~ 81 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTT---------TNDTLFSRSNEFLPNIKYYNVHDGLPKG 81 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHH---------HHHHSCSSSSCCCTTEEEEECCCCCCTT
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhC-CCCEEEEEEeCHH---------HHHhhhcccccCCCCceEEecCCCCCCC
Confidence 36899999999999999999999999998 9 9999999875 222222211 3468999998432222
Q ss_pred CCCchhhHHHHHHHHHHhHHHHHHHHHHHhcC--CCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHHHHhhcccc
Q 011396 85 LPDDVRMETRITLTLARSLSSLRDALKVLAES--TRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPEL 162 (487)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 162 (487)
.....+....+...+....+.+++.+++++.+ .++||||+|.++.|+..+|+++|||++.+++++++.++.+.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 82 YVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 11111112223334444455677777765433 5799999999999999999999999999999999999999887765
Q ss_pred ccccccCCCCCCCcc-cCCCCCccCcCCCCCCcc-ccchHHHHHHHHHHhhhhcccEEEEcchhhhchHHHHHHhcCCCC
Q 011396 163 DVKFSCEYRDVPEPV-QLPGCVPINGRDFADPFQ-QRKNEAYRIFLSFSKQYLVAAGIMVNSFMDLETGAFKALMEGDSS 240 (487)
Q Consensus 163 ~~~~~~~~~~~~~~~-~~pg~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~ 240 (487)
.+............+ .+||++++...+++..+. +........+.+..+...+++++++|||+++|.++.+++.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~--- 238 (454)
T 3hbf_A 162 REKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK--- 238 (454)
T ss_dssp HHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT---
T ss_pred HhhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc---
Confidence 443110000112233 379998999999987765 333345555666677788899999999999999999988873
Q ss_pred CCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCcc
Q 011396 241 FKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSPHE 320 (487)
Q Consensus 241 ~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 320 (487)
.|++++|||+........ +..+.++.+||+.++++++|||||||+.....+++.+++.+|+.++++|||+++....
T Consensus 239 --~~~v~~vGPl~~~~~~~~--~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~ 314 (454)
T 3hbf_A 239 --FKLLLNVGPFNLTTPQRK--VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPK 314 (454)
T ss_dssp --SSCEEECCCHHHHSCCSC--CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHH
T ss_pred --CCCEEEECCccccccccc--ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcch
Confidence 369999999976433221 1145789999999888999999999998888999999999999999999999987532
Q ss_pred ccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhhCCceeccccccc
Q 011396 321 RAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAE 400 (487)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~D 400 (487)
..+|++|.++.+ .|+++++|+||.++|+|++|++||||||+||++|++++|||||++|+++|
T Consensus 315 -----------------~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~D 376 (454)
T 3hbf_A 315 -----------------EKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGD 376 (454)
T ss_dssp -----------------HHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred -----------------hcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccccc
Confidence 357888877765 47777799999999999999999999999999999999999999999999
Q ss_pred cchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 011396 401 QKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWK 480 (487)
Q Consensus 401 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 480 (487)
|+.||+++++.+|+|+.++... +++++|.++|+++|.|++|++||+||+++++++++++++||||++++++|++++.
T Consensus 377 Q~~Na~~v~~~~g~Gv~l~~~~---~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 377 QGLNTILTESVLEIGVGVDNGV---LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHHHHTTSCSEEECGGGS---CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCeeEEecCCC---CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9999999999449999998766 9999999999999998667799999999999999999999999999999999875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=4.7e-64 Score=515.18 Aligned_cols=462 Identities=58% Similarity=0.996 Sum_probs=346.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCCchh
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPDDVR 90 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 90 (487)
++||+++|+|++||++|+++||+.|++|+||+|||++++.+. +.. ........++.+++++.++.....+......
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~--~~~--~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 81 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGP--PSK--AQRTVLDSLPSSISSVFLPPVDLTDLSSSTR 81 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSS--CC---CHHHHHC-CCTTEEEEECCCCCCTTSCTTCC
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcc--hhh--hhhhhccccCCCceEEEcCCCCCCCCCCchh
Confidence 469999999999999999999999986449999999988621 011 1111111123578899888643222111111
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhcCCCc-eEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHHHHhhccccccccccC
Q 011396 91 METRITLTLARSLSSLRDALKVLAESTRL-VALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDVKFSCE 169 (487)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~p-D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (487)
....+........+.+++.++++....++ ||||+|.++.|+..+|+++|||++.++++++...+.+.+.+...+....+
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 82 IESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 12222333444556677777665333477 99999999999999999999999999999998888887766544322211
Q ss_pred CCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhhhhcccEEEEcchhhhchHHHHHHhcCCCCCCCCCeeec
Q 011396 170 YRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQYLVAAGIMVNSFMDLETGAFKALMEGDSSFKPPPVYPV 249 (487)
Q Consensus 170 ~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~~~~v 249 (487)
..+......+|+++++...+++..++++....+..+......+++..++++|++.++|..++.++.+..+. .|++++|
T Consensus 162 ~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~--~~~v~~v 239 (480)
T 2vch_A 162 FRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLD--KPPVYPV 239 (480)
T ss_dssp GGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTT--CCCEEEC
T ss_pred ccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccC--CCcEEEE
Confidence 11111223468888877777776665554455555556666777888999999999999999998873222 3689999
Q ss_pred ccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCccccccccccc
Q 011396 250 GPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFG 329 (487)
Q Consensus 250 Gp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~ 329 (487)
||+........ .+..+.++.+||+.++++++|||||||+.....+++.+++++|+.++++|||+++....+. ...|+-
T Consensus 240 Gpl~~~~~~~~-~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~-~~~~~~ 317 (480)
T 2vch_A 240 GPLVNIGKQEA-KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIA-NSSYFD 317 (480)
T ss_dssp CCCCCCSCSCC------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSST-TTTTTC
T ss_pred ecccccccccc-CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccc-cccccc
Confidence 99986542210 0125678999999988889999999999888889999999999999999999998743100 000000
Q ss_pred cCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhhCCceeccccccccchhhHhh-
Q 011396 330 IQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLL- 408 (487)
Q Consensus 330 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v- 408 (487)
...+.+....+|++|.++.+..++++.+|+||.+||+|++|++||||||+||++||+++|||||++|+++||+.||+++
T Consensus 318 ~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~ 397 (480)
T 2vch_A 318 SHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLS 397 (480)
T ss_dssp C--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred cccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHH
Confidence 0000011135889999888888888878999999999999999999999999999999999999999999999999997
Q ss_pred hhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHh
Q 011396 409 IDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKN 481 (487)
Q Consensus 409 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 481 (487)
++ +|+|+.++..+++.+++++|+++|+++|.+++++.||+||+++++++++++++||++++++++|++++++
T Consensus 398 ~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 398 ED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 67 9999999775333499999999999999865568999999999999999999999999999999999986
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=9.9e-60 Score=481.27 Aligned_cols=438 Identities=34% Similarity=0.631 Sum_probs=332.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCCCCCCCCCCch-hhhhhhcCCCCceEEeCCCCCCCCC--C
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQH-NFLVTIFIPTIDDGTGSSMEP-QRQVLESLPTSISTIFLPPVSFDDL--P 86 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~--~ 86 (487)
++||+++|+|++||++|+++||+.|++|+ ||+|||++++.+.... ... .... ...+.++++..++....... .
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~--~~~~~~~~-~~~~~~i~~~~lp~~~~~~~~~~ 85 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPF--ADSYIKSV-LASQPQIQLIDLPEVEPPPQELL 85 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCC--CHHHHHHH-HCSCTTEEEEECCCCCCCCGGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhh--hhhhhhhc-ccCCCCceEEECCCCCCCccccc
Confidence 57999999999999999999999998754 9999999998721100 001 0111 11235789999986532211 0
Q ss_pred CchhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHHHHhhcccccccc
Q 011396 87 DDVRMETRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDVKF 166 (487)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 166 (487)
.+... . +...+....+.+++.++++ +..+|||||+|.++.|+..+|+++|||+++++++++..++.+.+.+.....
T Consensus 86 ~~~~~-~-~~~~~~~~~~~~~~ll~~~-~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 161 (463)
T 2acv_A 86 KSPEF-Y-ILTFLESLIPHVKATIKTI-LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE- 161 (463)
T ss_dssp GSHHH-H-HHHHHHHTHHHHHHHHHHH-CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT-
T ss_pred CCccH-H-HHHHHHhhhHHHHHHHHhc-cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc-
Confidence 11111 1 3344445556677777664 336899999999999999999999999999999999988888777654311
Q ss_pred ccCCCCCCC---cccCCCC-CccCcCCCCCCccccchHHHHHHHHHHhhhhcccEEEEcchhhhchHHHHHHhcCCCCCC
Q 011396 167 SCEYRDVPE---PVQLPGC-VPINGRDFADPFQQRKNEAYRIFLSFSKQYLVAAGIMVNSFMDLETGAFKALMEGDSSFK 242 (487)
Q Consensus 167 ~~~~~~~~~---~~~~pg~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~ 242 (487)
.+...... ...+||+ +++...+++..+.++ ...+..+......++++.++++|||+++|+.+++++.+....
T Consensus 162 -~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p-- 237 (463)
T 2acv_A 162 -EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEK-- 237 (463)
T ss_dssp -CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTT--
T ss_pred -CCCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcccc--
Confidence 11111111 3456888 777666666555554 345555555666678888999999999999998888764311
Q ss_pred CCCeeecccCcCCCC-CC-CCCCccccccccccccCCCCcEEEEEecCCC-CCCHHHHHHHHHHHHhcCCceEEEEeCCc
Q 011396 243 PPPVYPVGPLVQTGS-TN-ETNNDRRHECLKWLDEQPSESVLFVCFGSGG-TLSPEQLNELALGLEMSGQRFLWVVRSPH 319 (487)
Q Consensus 243 ~p~~~~vGp~~~~~~-~~-~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 319 (487)
.|++++|||+..... .. ...|..+.++.+||+.++++++|||||||+. ....+++.+++++|+..+.+|||+++..
T Consensus 238 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~- 316 (463)
T 2acv_A 238 IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE- 316 (463)
T ss_dssp SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC-
T ss_pred CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC-
Confidence 368999999986542 10 1011245788999999888899999999998 7788889999999999999999999863
Q ss_pred cccccccccccCCCCCCCCCCchhHHHhhc-CCCeeecccCCccccccccccccccccccchhHHHHHhhCCceeccccc
Q 011396 320 ERAANATYFGIQSMKDPFDFLPKGFLDRTK-GVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY 398 (487)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~ 398 (487)
. ..+|++|.++.. ..++.+.+|+||.++|+|+++++||||||+||++|++++|||||++|++
T Consensus 317 ~-----------------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~ 379 (463)
T 2acv_A 317 K-----------------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY 379 (463)
T ss_dssp G-----------------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred c-----------------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccch
Confidence 1 135677766551 2467777899999999999999999999999999999999999999999
Q ss_pred cccchhhHhh-hhhccceEEe-eecCCC--CcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHH
Q 011396 399 AEQKMNAVLL-IDDLKVSFRV-KVNENG--LVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQ 474 (487)
Q Consensus 399 ~DQ~~na~~v-~~~~G~G~~l-~~~~~~--~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~ 474 (487)
.||+.||+++ ++ +|+|+.+ +..+++ .+++++|.++|+++|++ +++||+||+++++++++++++||||++++++
T Consensus 380 ~dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~ 456 (463)
T 2acv_A 380 AEQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGK 456 (463)
T ss_dssp TTHHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred hhhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 9999999995 78 9999999 311111 38999999999999962 2789999999999999999999999999999
Q ss_pred HHHHHH
Q 011396 475 VAQKWK 480 (487)
Q Consensus 475 ~~~~~~ 480 (487)
|+++++
T Consensus 457 ~v~~~~ 462 (463)
T 2acv_A 457 LIDDIT 462 (463)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999985
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2e-59 Score=482.37 Aligned_cols=439 Identities=28% Similarity=0.479 Sum_probs=319.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcC-------CCCceEEeCCCCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESL-------PTSISTIFLPPVSF 82 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~ 82 (487)
.++||+++|+|++||++|++.||++|++| ||+|||++++. ....+.... ..++++..+++.-.
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~r-G~~VT~v~t~~---------~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp 76 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEY---------NHKRLLKSRGPKAFDGFTDFNFESIPDGLT 76 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEEHH---------HHHHHC------------CEEEEEECCCCC
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhC-CCeEEEEeCCc---------hhhhhccccccccccCCCceEEEECCCCCC
Confidence 35799999999999999999999999998 99999999886 222221110 02688888874211
Q ss_pred CCC--CCchhhHHHHHHHH-HHhHHHHHHHHHHHhc---CCCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHHHH
Q 011396 83 DDL--PDDVRMETRITLTL-ARSLSSLRDALKVLAE---STRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLSLI 156 (487)
Q Consensus 83 ~~~--~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~---~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~ 156 (487)
... .........+...+ ....+.++++++.+.. ..+|||||+|.++.|+..+|+++|||++.++++++...+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 156 (482)
T 2pq6_A 77 PMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNV 156 (482)
T ss_dssp ---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHH
T ss_pred CcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHH
Confidence 100 00001111222222 3344566777766543 25899999999999999999999999999999998877766
Q ss_pred hhcccccc--ccccCCC-----C-CCCcc-cCCCCCccCcCCCCCCcccc--chHHHHHHHHHHhhhhcccEEEEcchhh
Q 011396 157 FHLPELDV--KFSCEYR-----D-VPEPV-QLPGCVPINGRDFADPFQQR--KNEAYRIFLSFSKQYLVAAGIMVNSFMD 225 (487)
Q Consensus 157 ~~~~~~~~--~~~~~~~-----~-~~~~~-~~pg~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 225 (487)
.+.+.... ..+.... . ..... .+|+++++...+++..+... .......+.........++++++||+++
T Consensus 157 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~ 236 (482)
T 2pq6_A 157 MHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNE 236 (482)
T ss_dssp TTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGG
T ss_pred HHHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHH
Confidence 54432111 0110000 0 00111 24566555555555433211 1222333334445567788999999999
Q ss_pred hchHHHHHHhcCCCCCCCCCeeecccCcCC-CCC-------C--CCCCccccccccccccCCCCcEEEEEecCCCCCCHH
Q 011396 226 LETGAFKALMEGDSSFKPPPVYPVGPLVQT-GST-------N--ETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPE 295 (487)
Q Consensus 226 le~~~~~~~~~~~~~~~~p~~~~vGp~~~~-~~~-------~--~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~ 295 (487)
+|+++.+++.+. .|++++|||+... ... . .+.|..+.++.+||+.++++++|||||||+.....+
T Consensus 237 le~~~~~~~~~~-----~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~ 311 (482)
T 2pq6_A 237 LESDVINALSST-----IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPE 311 (482)
T ss_dssp GGHHHHHHHHTT-----CTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHH
T ss_pred HhHHHHHHHHHh-----CCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHH
Confidence 999988887763 3689999999763 111 0 111223456889999988889999999999888888
Q ss_pred HHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccc
Q 011396 296 QLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLS 375 (487)
Q Consensus 296 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~ 375 (487)
++.+++.+|+.++.+|+|+++..... .....+|+++.++.. .|+.+++|+||.++|+|+++++|||
T Consensus 312 ~~~~~~~~l~~~~~~~l~~~~~~~~~-------------~~~~~l~~~~~~~~~-~~~~v~~~~pq~~~L~h~~~~~~vt 377 (482)
T 2pq6_A 312 QLLEFAWGLANCKKSFLWIIRPDLVI-------------GGSVIFSSEFTNEIA-DRGLIASWCPQDKVLNHPSIGGFLT 377 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGST-------------TTGGGSCHHHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCccc-------------cccccCcHhHHHhcC-CCEEEEeecCHHHHhcCCCCCEEEe
Confidence 89999999999999999999864210 001236788876664 5888889999999999999999999
Q ss_pred cccchhHHHHHhhCCceeccccccccchhhHhhh-hhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHH
Q 011396 376 HCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLI-DDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRAL 454 (487)
Q Consensus 376 HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~-~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l 454 (487)
|||+||++|++++|||||++|++.||+.||++++ + +|+|+.++ .+ +++++|.++|+++|.|++++.||+||+++
T Consensus 378 h~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~-~G~g~~l~-~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l 452 (482)
T 2pq6_A 378 HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE-WEIGMEID-TN---VKREELAKLINEVIAGDKGKKMKQKAMEL 452 (482)
T ss_dssp CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-SCCEEECC-SS---CCHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred cCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH-hCEEEEEC-CC---CCHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999997 7 99999998 55 99999999999999985555899999999
Q ss_pred HHHHHhhcCCCCChHHHHHHHHHHHHhh
Q 011396 455 KDAAANALSPDGSSTKSLAQVAQKWKNL 482 (487)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 482 (487)
++++++++++|||+++++++|+++++.+
T Consensus 453 ~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 453 KKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998654
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.3e-59 Score=476.19 Aligned_cols=433 Identities=25% Similarity=0.429 Sum_probs=318.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCC--EEEEEeCCCCCCCCCCCchhhhhhhc-C---CCCceEEeCCCCCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNF--LVTIFIPTIDDGTGSSMEPQRQVLES-L---PTSISTIFLPPVSFD 83 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH--~Vt~~~~~~~~~~~~~~~~~~~~~~~-~---~~~i~~~~~~~~~~~ 83 (487)
+++||+++|+|++||++|+++||+.|++| || .|||++++. ........ . +.++.+..+++.-.+
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~r-Gh~v~vt~~~t~~---------~~~~~~~~~~~~~~~~i~~~~i~~glp~ 75 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAA-APHAVFSFFSTSQ---------SNASIFHDSMHTMQCNIKSYDISDGVPE 75 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHH---------HHHHHC-------CTTEEEEECCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhC-CCCeEEEEEeCch---------hHHHhhccccccCCCceEEEeCCCCCCC
Confidence 35799999999999999999999999987 75 568887764 22222211 1 246888888642111
Q ss_pred CCCCchhhHHHHHHHHHHhHHHHHHHHHHHhc--CCCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHHHHhhccc
Q 011396 84 DLPDDVRMETRITLTLARSLSSLRDALKVLAE--STRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPE 161 (487)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~ 161 (487)
...........+........+.+++.++++.+ ..+|||||+|.++.|+..+|+++|||++.++++++..++.+.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 155 (456)
T 2c1x_A 76 GYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDE 155 (456)
T ss_dssp TCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHH
Confidence 11000011111112222223456666665543 2589999999999999999999999999999998887776655443
Q ss_pred cccccc--cCCCCCCCc-ccCCCCCccCcCCCCCCcc-ccchHHHHHH-HHHHhhhhcccEEEEcchhhhchHHHHHHhc
Q 011396 162 LDVKFS--CEYRDVPEP-VQLPGCVPINGRDFADPFQ-QRKNEAYRIF-LSFSKQYLVAAGIMVNSFMDLETGAFKALME 236 (487)
Q Consensus 162 ~~~~~~--~~~~~~~~~-~~~pg~~~~~~~~~~~~~~-~r~~~~~~~~-~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~ 236 (487)
+..... ......... ..+|+++++...+++..+. ......+..+ .+.......++++++||++++|.++.+++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~ 235 (456)
T 2c1x_A 156 IREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKS 235 (456)
T ss_dssp HHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHH
T ss_pred HHhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHh
Confidence 322111 000011111 1357776666666665332 1111122222 2233445678899999999999998888776
Q ss_pred CCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEe
Q 011396 237 GDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVR 316 (487)
Q Consensus 237 ~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 316 (487)
. .|++++|||+........ +..+.++.+|++.++++++|||||||......+++.+++++|+..+.+|+|+++
T Consensus 236 ~-----~~~~~~vGpl~~~~~~~~--~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~ 308 (456)
T 2c1x_A 236 K-----LKTYLNIGPFNLITPPPV--VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLR 308 (456)
T ss_dssp H-----SSCEEECCCHHHHC-----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred c-----CCCEEEecCcccCccccc--ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEEC
Confidence 3 368999999976432110 113457889999888889999999999887888899999999999999999998
Q ss_pred CCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhhCCceeccc
Q 011396 317 SPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWP 396 (487)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P 396 (487)
.... ..+|++|.++.+ .|+.+.+|+||.++|+|+++++||||||+||++|++++|||||++|
T Consensus 309 ~~~~-----------------~~l~~~~~~~~~-~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P 370 (456)
T 2c1x_A 309 DKAR-----------------VHLPEGFLEKTR-GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRP 370 (456)
T ss_dssp GGGG-----------------GGSCTTHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred Ccch-----------------hhCCHHHHhhcC-CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecC
Confidence 6432 346777766653 5788889999999999999999999999999999999999999999
Q ss_pred cccccchhhHhhhhhc-cceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHH
Q 011396 397 LYAEQKMNAVLLIDDL-KVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQV 475 (487)
Q Consensus 397 ~~~DQ~~na~~v~~~~-G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~ 475 (487)
++.||+.||+++++ . |+|+.++..+ +++++|.++|+++|.|+++++||+||+++++.+++++++||||++++++|
T Consensus 371 ~~~dQ~~Na~~l~~-~~g~g~~l~~~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~ 446 (456)
T 2c1x_A 371 FFGDQRLNGRMVED-VLEIGVRIEGGV---FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITL 446 (456)
T ss_dssp CSTTHHHHHHHHHH-TSCCEEECGGGS---CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHH
T ss_pred ChhhHHHHHHHHHH-HhCeEEEecCCC---cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHH
Confidence 99999999999999 7 9999998766 99999999999999986666999999999999999999999999999999
Q ss_pred HHHHHh
Q 011396 476 AQKWKN 481 (487)
Q Consensus 476 ~~~~~~ 481 (487)
++++.+
T Consensus 447 v~~~~~ 452 (456)
T 2c1x_A 447 VDLVSK 452 (456)
T ss_dssp HHHHTS
T ss_pred HHHHHh
Confidence 999864
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.4e-42 Score=352.30 Aligned_cols=397 Identities=16% Similarity=0.201 Sum_probs=258.9
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCC-C
Q 011396 8 QIPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDL-P 86 (487)
Q Consensus 8 ~~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~ 86 (487)
+++|+||+|+++++.||++|+++||++|+++ ||+|+|++++. ....+.. .++.+..++..-.... .
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~-Gh~V~~~~~~~---------~~~~~~~---~g~~~~~~~~~~~~~~~~ 75 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDE---------FAAQVKA---AGATPVVYDSILPKESNP 75 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGG---------GHHHHHH---HTCEEEECCCCSCCTTCT
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHC-CCeEEEEeCHH---------HHHHHHh---CCCEEEecCccccccccc
Confidence 3557899999999999999999999999888 99999999886 2222221 2567777664211110 0
Q ss_pred -Cc-hhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHHHHhhcccccc
Q 011396 87 -DD-VRMETRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDV 164 (487)
Q Consensus 87 -~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 164 (487)
+. ..........+........+.+.+++++.+||+||+|.+..|+..+|+++|||++.+++++..........+....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 155 (424)
T 2iya_A 76 EESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQD 155 (424)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSC
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccc
Confidence 00 0011122222222333344455566677799999999988899999999999999998775411100000000000
Q ss_pred ccccCCCCCCCcccCCCCCccCcC---CCCCC--ccccchHHHHHHHHHH-------hhhhcccEEEEcchhhhchHHHH
Q 011396 165 KFSCEYRDVPEPVQLPGCVPINGR---DFADP--FQQRKNEAYRIFLSFS-------KQYLVAAGIMVNSFMDLETGAFK 232 (487)
Q Consensus 165 ~~~~~~~~~~~~~~~pg~~~~~~~---~~~~~--~~~r~~~~~~~~~~~~-------~~~~~~~~~l~~s~~~le~~~~~ 232 (487)
.. .... .+...+.... .+... ........+..+.... ......+.++.+++..++.+.
T Consensus 156 ~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~-- 225 (424)
T 2iya_A 156 PT-------ADRG-EEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG-- 225 (424)
T ss_dssp CC-------C----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG--
T ss_pred cc-------cccc-cccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc--
Confidence 00 0000 0000000000 00000 0000000111111110 011145567888887776541
Q ss_pred HHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceE
Q 011396 233 ALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFL 312 (487)
Q Consensus 233 ~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 312 (487)
. .+ .+++++|||+..... +..+|++..+++++|||++||......+.+..++++++..+.+++
T Consensus 226 ---~---~~-~~~~~~vGp~~~~~~----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~ 288 (424)
T 2iya_A 226 ---D---TV-GDNYTFVGPTYGDRS----------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVV 288 (424)
T ss_dssp ---G---GC-CTTEEECCCCCCCCG----------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEE
T ss_pred ---c---CC-CCCEEEeCCCCCCcc----------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 1 11 247999999764321 123577665567899999999876667888899999988888999
Q ss_pred EEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhhCCce
Q 011396 313 WVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPI 392 (487)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~ 392 (487)
|.++..... +.+..+ .+|+.+.+|+||.++|++++ +||||||+||++|++++|+|+
T Consensus 289 ~~~g~~~~~-------------~~~~~~---------~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~ 344 (424)
T 2iya_A 289 LSVGRFVDP-------------ADLGEV---------PPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPM 344 (424)
T ss_dssp EECCTTSCG-------------GGGCSC---------CTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCE
T ss_pred EEECCcCCh-------------HHhccC---------CCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCE
Confidence 988764220 001112 24888999999999999999 999999999999999999999
Q ss_pred eccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHH
Q 011396 393 IAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSL 472 (487)
Q Consensus 393 l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~ 472 (487)
|++|+..||+.||+++++ .|+|+.++..+ +++++|.++|+++++| +.++++++++++.+++ .++..+.+
T Consensus 345 i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~ 413 (424)
T 2iya_A 345 VAVPQIAEQTMNAERIVE-LGLGRHIPRDQ---VTAEKLREAVLAVASD---PGVAERLAAVRQEIRE----AGGARAAA 413 (424)
T ss_dssp EECCCSHHHHHHHHHHHH-TTSEEECCGGG---CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCHHHHHH
T ss_pred EEecCccchHHHHHHHHH-CCCEEEcCcCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHH
Confidence 999999999999999999 99999998776 8999999999999999 8999999999999985 45555555
Q ss_pred HHHHHHH
Q 011396 473 AQVAQKW 479 (487)
Q Consensus 473 ~~~~~~~ 479 (487)
+.+.+.+
T Consensus 414 ~~i~~~~ 420 (424)
T 2iya_A 414 DILEGIL 420 (424)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=9.6e-44 Score=357.87 Aligned_cols=348 Identities=19% Similarity=0.204 Sum_probs=218.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCC-C------
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVS-F------ 82 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~------ 82 (487)
+.|||+|+++|+.||++|+++||++|++| ||+|||++++. + . ... ..++.+..+.... .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~~~----~-----~-~~~---~~g~~~~~~~~~~~~~~~~~~ 86 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATGGD----I-----R-AVA---EAGLCAVDVSPGVNYAKLFVP 86 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECSS----T-----H-HHH---TTTCEEEESSTTCCSHHHHSC
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeCcc----h-----h-hHH---hcCCeeEecCCchhHhhhccc
Confidence 45799999999999999999999999998 99999999876 1 1 111 1234444443211 0
Q ss_pred --CCCCCc----hhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHHHH
Q 011396 83 --DDLPDD----VRMETRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLSLI 156 (487)
Q Consensus 83 --~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~ 156 (487)
...... ......+...+........+.+.+++++.+||+||+|...+++..+|+.+|||++.+..++....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~--- 163 (400)
T 4amg_A 87 DDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSE--- 163 (400)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCC---
T ss_pred cccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccc---
Confidence 000000 00011111112111222222222333444999999999999999999999999887544321110
Q ss_pred hhccccccccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhhh-hcccEEEEcchhhhchHHHHHHh
Q 011396 157 FHLPELDVKFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQY-LVAAGIMVNSFMDLETGAFKALM 235 (487)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~l~~s~~~le~~~~~~~~ 235 (487)
|.+ .......+.......... ............ .......
T Consensus 164 -----------------------~~~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 204 (400)
T 4amg_A 164 -----------------------PGL------------GALIRRAMSKDYERHGVTGEPTGSVRLTTTP----PSVEALL 204 (400)
T ss_dssp -----------------------HHH------------HHHHHHHTHHHHHHTTCCCCCSCEEEEECCC----HHHHHTS
T ss_pred -----------------------cch------------hhHHHHHHHHHHHHhCCCcccccchhhcccC----chhhccC
Confidence 000 000000001111111000 011111111110 0011101
Q ss_pred cCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCC--HHHHHHHHHHHHhcCCceEE
Q 011396 236 EGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLS--PEQLNELALGLEMSGQRFLW 313 (487)
Q Consensus 236 ~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i~ 313 (487)
+.. ...+..+++.+.... ....+.+|++..+++++|||+|||+.... .+.+..++++++..+.+++|
T Consensus 205 ~~~--~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~ 273 (400)
T 4amg_A 205 PED--RRSPGAWPMRYVPYN---------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVL 273 (400)
T ss_dssp CGG--GCCTTCEECCCCCCC---------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEE
T ss_pred ccc--ccCCcccCccccccc---------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEE
Confidence 000 011233333332221 23344568888888999999999985443 35688899999999999999
Q ss_pred EEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhhCCcee
Q 011396 314 VVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPII 393 (487)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l 393 (487)
..+.... +....+|+ |+.+.+|+||.++|+|++ +||||||+||++||+++|||+|
T Consensus 274 ~~~~~~~--------------~~~~~~~~---------~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v 328 (400)
T 4amg_A 274 TLGGGDL--------------ALLGELPA---------NVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQC 328 (400)
T ss_dssp ECCTTCC--------------CCCCCCCT---------TEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEE
T ss_pred EecCccc--------------cccccCCC---------CEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEE
Confidence 9887543 22233444 788999999999999999 9999999999999999999999
Q ss_pred ccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHh
Q 011396 394 AWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAAN 460 (487)
Q Consensus 394 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~ 460 (487)
++|++.||+.||+++++ +|+|+.++..+ ++.+ +|+++|+| +.||+||+++++++++
T Consensus 329 ~~P~~~dQ~~na~~v~~-~G~g~~l~~~~---~~~~----al~~lL~d---~~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 329 VIPHGSYQDTNRDVLTG-LGIGFDAEAGS---LGAE----QCRRLLDD---AGLREAALRVRQEMSE 384 (400)
T ss_dssp ECCC---CHHHHHHHHH-HTSEEECCTTT---CSHH----HHHHHHHC---HHHHHHHHHHHHHHHT
T ss_pred EecCcccHHHHHHHHHH-CCCEEEcCCCC---chHH----HHHHHHcC---HHHHHHHHHHHHHHHc
Confidence 99999999999999999 99999998776 6654 56778889 8999999999999996
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.3e-40 Score=334.90 Aligned_cols=353 Identities=14% Similarity=0.112 Sum_probs=234.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCC---CCCc
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDD---LPDD 88 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~ 88 (487)
+||+|+++++.||++|+++||++|+++ ||+|||++++. .... .. ..++.+..++...... ....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~-Gh~V~~~~~~~---------~~~~-v~--~~g~~~~~i~~~~~~~~~~~~~~ 67 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPD---------CAER-LA--EVGVPHVPVGPSARAPIQRAKPL 67 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGG---------GHHH-HH--HTTCCEEECCC-------CCSCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC-CCeEEEEcCHH---------HHHH-HH--HcCCeeeeCCCCHHHHhhccccc
Confidence 489999999999999999999999988 99999999886 2222 22 1357777776532111 1111
Q ss_pred hhhHHHHHHHHHHhHHHHHHHHHHHhc-CCCceEEEeCC-Ccch--HHHHHHHhCCCeEEEecchHHHHHHHhhcccccc
Q 011396 89 VRMETRITLTLARSLSSLRDALKVLAE-STRLVALVVDI-FGSA--AFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDV 164 (487)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~pD~vI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 164 (487)
.. ..+...+. ..+.+.++++.+ ..+||+||+|. +..| +..+|+++|||++.++++++...+. +
T Consensus 68 ~~--~~~~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~--~------ 134 (415)
T 1iir_A 68 TA--EDVRRFTT---EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP--Y------ 134 (415)
T ss_dssp CH--HHHHHHHH---HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--S------
T ss_pred ch--HHHHHHHH---HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc--c------
Confidence 11 11111111 122333444332 45999999997 6777 8899999999999988775332000 0
Q ss_pred ccccCCCCCCCcccCCCCCccCcCCCCCC-ccccc-----hHH-HHHHHHHHhhhhccc---------------EEEEcc
Q 011396 165 KFSCEYRDVPEPVQLPGCVPINGRDFADP-FQQRK-----NEA-YRIFLSFSKQYLVAA---------------GIMVNS 222 (487)
Q Consensus 165 ~~~~~~~~~~~~~~~pg~~~~~~~~~~~~-~~~r~-----~~~-~~~~~~~~~~~~~~~---------------~~l~~s 222 (487)
+|.... . ..++.. ...+. ... +..+.......++.. .++.++
T Consensus 135 --------------~p~~~~-~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~ 198 (415)
T 1iir_A 135 --------------YPPPPL-G-EPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAA 198 (415)
T ss_dssp --------------SCCCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECS
T ss_pred --------------cCCccC-C-ccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEee
Confidence 010000 0 001000 01110 000 000111111111110 234555
Q ss_pred hhhhch-HHHHHHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHH
Q 011396 223 FMDLET-GAFKALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELA 301 (487)
Q Consensus 223 ~~~le~-~~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~ 301 (487)
.+.+++ + .+ .. ++++|||+..... +..+.++.+|++.++ ++|||++||+. ...+.+..++
T Consensus 199 ~~~l~~~~--------~~--~~-~~~~vG~~~~~~~-----~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~ 259 (415)
T 1iir_A 199 DPVLAPLQ--------PT--DL-DAVQTGAWILPDE-----RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAI 259 (415)
T ss_dssp CTTTSCCC--------CC--SS-CCEECCCCCCCCC-----CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHH
T ss_pred ChhhcCCC--------cc--cC-CeEeeCCCccCcc-----cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHH
Confidence 554443 1 00 12 7899999876532 115678889997653 59999999987 5677788899
Q ss_pred HHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchh
Q 011396 302 LGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNS 381 (487)
Q Consensus 302 ~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt 381 (487)
++++..+.+++|+++.... + ...++ +|+.+.+|+||.++|+.++ +||||||+||
T Consensus 260 ~al~~~~~~~v~~~g~~~~--------------~-~~~~~---------~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t 313 (415)
T 1iir_A 260 DAIRAHGRRVILSRGWADL--------------V-LPDDG---------ADCFAIGEVNHQVLFGRVA--AVIHHGGAGT 313 (415)
T ss_dssp HHHHHTTCCEEECTTCTTC--------------C-CSSCG---------GGEEECSSCCHHHHGGGSS--EEEECCCHHH
T ss_pred HHHHHCCCeEEEEeCCCcc--------------c-ccCCC---------CCEEEeCcCChHHHHhhCC--EEEeCCChhH
Confidence 9999999999998876422 1 11222 3788999999999998777 9999999999
Q ss_pred HHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Q 011396 382 ILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAA 459 (487)
Q Consensus 382 ~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~ 459 (487)
++|++++|+|+|++|+..||..||+++++ .|+|+.++..+ ++.++|.++|+++ +| +.+++++++++++++
T Consensus 314 ~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 314 THVAARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDGPI---PTFDSLSAALATA-LT---PETHARATAVAGTIR 383 (415)
T ss_dssp HHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSSSS---CCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC
T ss_pred HHHHHHcCCCEEECCCCCccHHHHHHHHH-CCCcccCCcCC---CCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999 99999998776 8999999999999 88 899999999998876
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.7e-39 Score=325.42 Aligned_cols=363 Identities=13% Similarity=0.059 Sum_probs=241.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCC----C
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLP----D 87 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~ 87 (487)
+||+|+++++.||++|+++||++|+++ ||+|+|++++. ....+.. .++.+..++........ .
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~-Gh~V~~~~~~~---------~~~~v~~---~g~~~~~~~~~~~~~~~~~~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPA---------AEERLAE---VGVPHVPVGLPQHMMLQEGMPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGG---------GHHHHHH---HTCCEEECSCCGGGCCCTTSCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC-CCeEEEEeCHH---------HHHHHHH---cCCeeeecCCCHHHHHhhcccc
Confidence 489999999999999999999999888 99999999875 2222221 25667776643111111 1
Q ss_pred chhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCC-Ccch--HHHHHHHhCCCeEEEecchHHHHHHHhhcccccc
Q 011396 88 DVRMETRITLTLARSLSSLRDALKVLAESTRLVALVVDI-FGSA--AFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDV 164 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 164 (487)
... ..+...+......+.+.+.+. ..+||+||+|. +.++ +..+|+.+|||++.+.+++....+
T Consensus 68 ~~~--~~~~~~~~~~~~~~~~~l~~~--~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~---------- 133 (416)
T 1rrv_A 68 PPP--EEEQRLAAMTVEMQFDAVPGA--AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS---------- 133 (416)
T ss_dssp CCH--HHHHHHHHHHHHHHHHHHHHH--TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC----------
T ss_pred chh--HHHHHHHHHHHHHHHHHHHHH--hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC----------
Confidence 111 112222222212222222221 45899999996 4566 788999999999988776532100
Q ss_pred ccccCCCCCCCcccCC-CCCccCcCCC-CCCccccchH-----H-HHHHHHHHhhh----------------hcccEEEE
Q 011396 165 KFSCEYRDVPEPVQLP-GCVPINGRDF-ADPFQQRKNE-----A-YRIFLSFSKQY----------------LVAAGIMV 220 (487)
Q Consensus 165 ~~~~~~~~~~~~~~~p-g~~~~~~~~~-~~~~~~r~~~-----~-~~~~~~~~~~~----------------~~~~~~l~ 220 (487)
.. +| .+ ++ .+ +....++... . +..+....... ... .++.
T Consensus 134 ----------~~--~p~~~-~~---~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~ 196 (416)
T 1rrv_A 134 ----------PH--LPPAY-DE---PTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLL 196 (416)
T ss_dssp ----------SS--SCCCB-CS---CCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEE
T ss_pred ----------cc--cCCCC-CC---CCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEE
Confidence 00 01 10 00 01 0001111100 0 00001111111 111 3455
Q ss_pred cchhhhchHHHHHHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCC-CCHHHHHH
Q 011396 221 NSFMDLETGAFKALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGT-LSPEQLNE 299 (487)
Q Consensus 221 ~s~~~le~~~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~ 299 (487)
++.++++++ .+ .. ++++|||+...... ..+.++.+|++.+ +++|||++||... ...+.+..
T Consensus 197 ~~~~~l~~~--------~~--~~-~~~~vG~~~~~~~~-----~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~ 258 (416)
T 1rrv_A 197 AADPVLAPL--------QP--DV-DAVQTGAWLLSDER-----PLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKV 258 (416)
T ss_dssp CSCTTTSCC--------CS--SC-CCEECCCCCCCCCC-----CCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHH
T ss_pred ccCccccCC--------CC--CC-CeeeECCCccCccC-----CCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHH
Confidence 555555432 00 12 78899998775321 1567788999765 3689999999854 34566888
Q ss_pred HHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccc
Q 011396 300 LALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGW 379 (487)
Q Consensus 300 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~ 379 (487)
++++++..+.+++|+++.... + ...+ .+|+.+.+|+||.++|+.++ +||||||+
T Consensus 259 ~~~al~~~~~~~v~~~g~~~~--------------~-~~~~---------~~~v~~~~~~~~~~ll~~~d--~~v~~~G~ 312 (416)
T 1rrv_A 259 AVEAIRAQGRRVILSRGWTEL--------------V-LPDD---------RDDCFAIDEVNFQALFRRVA--AVIHHGSA 312 (416)
T ss_dssp HHHHHHHTTCCEEEECTTTTC--------------C-CSCC---------CTTEEEESSCCHHHHGGGSS--EEEECCCH
T ss_pred HHHHHHHCCCeEEEEeCCccc--------------c-ccCC---------CCCEEEeccCChHHHhccCC--EEEecCCh
Confidence 999999999999999886422 1 1112 24788999999999998888 99999999
Q ss_pred hhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Q 011396 380 NSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAA 459 (487)
Q Consensus 380 gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~ 459 (487)
||++||+++|+|+|++|+..||+.||+++++ .|+|+.++..+ ++.++|.++|+++ .| +.+++++++++++++
T Consensus 313 ~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 313 GTEHVATRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDGPT---PTFESLSAALTTV-LA---PETRARAEAVAGMVL 384 (416)
T ss_dssp HHHHHHHHHTCCEEECCCSBTHHHHHHHHHH-HTSEEECSSSC---CCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCC
T ss_pred hHHHHHHHcCCCEEEccCCCCcHHHHHHHHH-CCCccCCCCCC---CCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 99999998766 8999999999999 88 899999999988877
Q ss_pred hhcCCCCChHHHHHHH
Q 011396 460 NALSPDGSSTKSLAQV 475 (487)
Q Consensus 460 ~~~~~~g~~~~~~~~~ 475 (487)
+ .++. ++++.+
T Consensus 385 ~----~~~~-~~~~~i 395 (416)
T 1rrv_A 385 T----DGAA-AAADLV 395 (416)
T ss_dssp C----CHHH-HHHHHH
T ss_pred h----cCcH-HHHHHH
Confidence 3 3344 555544
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=4.5e-38 Score=318.11 Aligned_cols=381 Identities=15% Similarity=0.137 Sum_probs=249.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCCc
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPDD 88 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 88 (487)
.+|+||+|+++++.||++|+++||++|+++ ||+|+|++++. ....+ . ..++.+..++.... .....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~---------~~~~~-~--~~G~~~~~~~~~~~-~~~~~ 83 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGG---------FAEPV-R--AAGATVVPYQSEII-DADAA 83 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGG---------GHHHH-H--HTTCEEEECCCSTT-TCCHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHH---------HHHHH-H--hcCCEEEecccccc-ccccc
Confidence 457899999999999999999999999888 99999999775 22222 2 23577777764211 11000
Q ss_pred -----hhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeC-CCcchHHHHHHHhCCCeEEEecchHHHHHHHhhcccc
Q 011396 89 -----VRMETRITLTLARSLSSLRDALKVLAESTRLVALVVD-IFGSAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPEL 162 (487)
Q Consensus 89 -----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 162 (487)
......+...+........+.+.+++++.+||+||+| ...+++..+|+++|||++.+.+..... ...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~----~~~--- 156 (415)
T 3rsc_A 84 EVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN----EHY--- 156 (415)
T ss_dssp HHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC----SSC---
T ss_pred hhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc----Ccc---
Confidence 0000111110112222233444555677799999999 778888899999999999876542210 000
Q ss_pred ccccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHh-------hhh-cccEEEEcchhhhchHHHHHH
Q 011396 163 DVKFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSK-------QYL-VAAGIMVNSFMDLETGAFKAL 234 (487)
Q Consensus 163 ~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-------~~~-~~~~~l~~s~~~le~~~~~~~ 234 (487)
. . .+.+.+......+ ..+......+..+..... ... ..+..+......++..
T Consensus 157 ----~--------~--~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~----- 216 (415)
T 3rsc_A 157 ----S--------F--SQDMVTLAGTIDP-LDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA----- 216 (415)
T ss_dssp ----C--------H--HHHHHHHHTCCCG-GGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----
T ss_pred ----c--------c--ccccccccccCCh-hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----
Confidence 0 0 0000000000000 001111111111111110 001 1134444433333322
Q ss_pred hcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEE
Q 011396 235 MEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWV 314 (487)
Q Consensus 235 ~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 314 (487)
.. .++ .++.++||+..... +...|....+++++|||++||......+.+..++++++..+.+++|.
T Consensus 217 ~~---~~~-~~~~~vGp~~~~~~----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~ 282 (415)
T 3rsc_A 217 GD---TFD-DRFVFVGPCFDDRR----------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMT 282 (415)
T ss_dssp GG---GCC-TTEEECCCCCCCCG----------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred cc---cCC-CceEEeCCCCCCcc----------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEE
Confidence 11 012 36899998765421 22246554556789999999987767778899999999888899988
Q ss_pred EeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhhCCceec
Q 011396 315 VRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIA 394 (487)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~ 394 (487)
.+..... +.+..+ .+|+.+.+|+|+..+|++++ +||||||+||+.|++++|+|+|+
T Consensus 283 ~g~~~~~-------------~~l~~~---------~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~ 338 (415)
T 3rsc_A 283 LGGQVDP-------------AALGDL---------PPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVV 338 (415)
T ss_dssp CTTTSCG-------------GGGCCC---------CTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEE
T ss_pred eCCCCCh-------------HHhcCC---------CCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEE
Confidence 8754220 111122 34888999999999999999 99999999999999999999999
Q ss_pred cccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHH
Q 011396 395 WPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQ 474 (487)
Q Consensus 395 ~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~ 474 (487)
+|...||+.||.++++ .|+|+.+...+ +++++|.++|.++|+| +.++++++++++.+.+ .++..+.++.
T Consensus 339 ~p~~~~q~~~a~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~ 407 (415)
T 3rsc_A 339 VPQSFDVQPMARRVDQ-LGLGAVLPGEK---ADGDTLLAAVGAVAAD---PALLARVEAMRGHVRR----AGGAARAADA 407 (415)
T ss_dssp CCCSGGGHHHHHHHHH-HTCEEECCGGG---CCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHH----SCHHHHHHHH
T ss_pred eCCcchHHHHHHHHHH-cCCEEEcccCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCHHHHHHHH
Confidence 9999999999999999 99999998877 8999999999999999 8999999999999985 4555555655
Q ss_pred HHHHH
Q 011396 475 VAQKW 479 (487)
Q Consensus 475 ~~~~~ 479 (487)
+.+.+
T Consensus 408 i~~~~ 412 (415)
T 3rsc_A 408 VEAYL 412 (415)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55444
No 11
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.7e-37 Score=316.47 Aligned_cols=373 Identities=12% Similarity=0.077 Sum_probs=234.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCC-CCC--
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSF-DDL-- 85 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-- 85 (487)
..++||+|+++++.||++|+++||++|+++ ||+|+|++++. . ..... ..++.+..++.... ..+
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~~~---------~-~~~v~--~~G~~~~~i~~~~~~~~~~~ 84 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVASPA---------L-TEDIT--AAGLTAVPVGTDVDLVDFMT 84 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEECGG---------G-HHHHH--TTTCCEEECSCCCCHHHHHH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeCch---------h-HHHHH--hCCCceeecCCccchHHHhh
Confidence 346799999999999999999999999888 99999999875 2 22222 24677777764310 000
Q ss_pred -------------------CC--chhhHHHHHHHHHH----------hHHHHHHHHHHHhcCCCceEEEeCCCcchHHHH
Q 011396 86 -------------------PD--DVRMETRITLTLAR----------SLSSLRDALKVLAESTRLVALVVDIFGSAAFDV 134 (487)
Q Consensus 86 -------------------~~--~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~ 134 (487)
+. .+.........+.. ....+.+.+ ++.+||+||+|..+.++..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~pDlVv~d~~~~~~~~a 160 (441)
T 2yjn_A 85 HAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFC----RKWRPDLVIWEPLTFAAPIA 160 (441)
T ss_dssp HTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHH----HHHCCSEEEECTTCTHHHHH
T ss_pred hhhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHH----HhcCCCEEEecCcchhHHHH
Confidence 00 01111111111111 222233333 34499999999988888999
Q ss_pred HHHhCCCeEEEecchHHHHHHHhhccccccccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhh-hh
Q 011396 135 ANEFGVPVYIFFTTTAMVLSLIFHLPELDVKFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQ-YL 213 (487)
Q Consensus 135 A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~ 213 (487)
|+.+|||++.+..++............ .+++.+.. ..+++....+..+...... ..
T Consensus 161 A~~lgiP~v~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~------~~~~~~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 161 AAVTGTPHARLLWGPDITTRARQNFLG-----------------LLPDQPEE------HREDPLAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp HHHHTCCEEEECSSCCHHHHHHHHHHH-----------------HGGGSCTT------TCCCHHHHHHHHHHHHTTCCCC
T ss_pred HHHcCCCEEEEecCCCcchhhhhhhhh-----------------hccccccc------cccchHHHHHHHHHHHcCCCCC
Confidence 999999999886544322111100000 00100000 0112221222222222111 00
Q ss_pred -----cccEEEEcchhhhchHHHHHHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecC
Q 011396 214 -----VAAGIMVNSFMDLETGAFKALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGS 288 (487)
Q Consensus 214 -----~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs 288 (487)
..+.++.++...++.+ . +.|. ..+++.... .+.++.+|++..+++++|||++||
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~---------~--~~~~-~~~~~~~~~---------~~~~~~~~l~~~~~~~~v~v~~Gs 276 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD---------T--GLKT-VGMRYVDYN---------GPSVVPEWLHDEPERRRVCLTLGI 276 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC---------C--CCCE-EECCCCCCC---------SSCCCCGGGSSCCSSCEEEEEC--
T ss_pred CccccCCCeEEEecCccccCC---------C--CCCC-CceeeeCCC---------CCcccchHhhcCCCCCEEEEECCC
Confidence 0112222222222110 0 1111 122222111 223456798866667899999999
Q ss_pred CCCC---CHHHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccc
Q 011396 289 GGTL---SPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVL 365 (487)
Q Consensus 289 ~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L 365 (487)
.... ..+.+..++++++..+.+++|+.+.... +.+..+ .+|+.+.+|+||.++|
T Consensus 277 ~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~--------------~~l~~~---------~~~v~~~~~~~~~~ll 333 (441)
T 2yjn_A 277 SSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQL--------------EGVANI---------PDNVRTVGFVPMHALL 333 (441)
T ss_dssp --------CCSTTTTHHHHHTSSSEEEECCCTTTT--------------SSCSSC---------CSSEEECCSCCHHHHG
T ss_pred CcccccChHHHHHHHHHHHHcCCCEEEEEECCcch--------------hhhccC---------CCCEEEecCCCHHHHH
Confidence 8653 3456777889998889999998885422 111112 2488999999999999
Q ss_pred cccccccccccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhH
Q 011396 366 RHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGK 445 (487)
Q Consensus 366 ~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 445 (487)
+.++ +||||||+||++|++++|+|+|++|+..||+.||.++++ .|+|+.++..+ ++.++|.++|+++|+| +
T Consensus 334 ~~ad--~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~ 404 (441)
T 2yjn_A 334 PTCA--ATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPE---LTPDQLRESVKRVLDD---P 404 (441)
T ss_dssp GGCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTT---CCHHHHHHHHHHHHHC---H
T ss_pred hhCC--EEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccccc---CCHHHHHHHHHHHhcC---H
Confidence 8888 999999999999999999999999999999999999999 99999998776 8999999999999999 8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 011396 446 LLRSKMRALKDAAANALSPDGSSTKSLAQVAQK 478 (487)
Q Consensus 446 ~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 478 (487)
.++++++++++.+.+ .++..+.++.+.+.
T Consensus 405 ~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 433 (441)
T 2yjn_A 405 AHRAGAARMRDDMLA----EPSPAEVVGICEEL 433 (441)
T ss_dssp HHHHHHHHHHHHHHT----SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc----CCCHHHHHHHHHHH
Confidence 999999999999985 44455555544443
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=4.9e-37 Score=308.94 Aligned_cols=383 Identities=16% Similarity=0.187 Sum_probs=248.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCC--CCCC-
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSF--DDLP- 86 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~- 86 (487)
.|+||+|+++++.||++|++.||++|+++ ||+|+|++++. .... .. ..++.+..++.... ...+
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~---------~~~~-~~--~~G~~~~~~~~~~~~~~~~~~ 69 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPL---------FADE-VK--AAGAEVVLYKSEFDTFHVPEV 69 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHH---------HHHH-HH--HTTCEEEECCCGGGTSSSSSS
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHH---------HHHH-HH--HcCCEEEeccccccccccccc
Confidence 35699999999999999999999999888 99999999865 2222 22 23567776653210 0000
Q ss_pred -CchhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeC-CCcchHHHHHHHhCCCeEEEecchHHHHHHHhhcccccc
Q 011396 87 -DDVRMETRITLTLARSLSSLRDALKVLAESTRLVALVVD-IFGSAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDV 164 (487)
Q Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 164 (487)
........+...+..........+.+++++.+||+||+| ....++..+|+++|||++.+.+...... ...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~----~~~---- 141 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANE----HYS---- 141 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBT----TBC----
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCc----ccc----
Confidence 111112222220222222223344455567799999999 7788888999999999998764422110 000
Q ss_pred ccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHH-------hhhh-cccEEEEcchhhhchHHHHHHhc
Q 011396 165 KFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFS-------KQYL-VAAGIMVNSFMDLETGAFKALME 236 (487)
Q Consensus 165 ~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~-------~~~~-~~~~~l~~s~~~le~~~~~~~~~ 236 (487)
. .+.+.+......+. .+......+..+.... .... ..+..+.....+++.. ..
T Consensus 142 -----------~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~ 202 (402)
T 3ia7_A 142 -----------L--FKELWKSNGQRHPA-DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AE 202 (402)
T ss_dssp -----------H--HHHHHHHHTCCCGG-GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GG
T ss_pred -----------c--cccccccccccChh-hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cc
Confidence 0 00000000000000 0000000111111100 0000 1133344333333322 11
Q ss_pred CCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEe
Q 011396 237 GDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVR 316 (487)
Q Consensus 237 ~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 316 (487)
.++ .++.++||+...... ...|+...+++++|||++||......+.+..++++++..+.+++|..+
T Consensus 203 ---~~~-~~~~~vGp~~~~~~~----------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 268 (402)
T 3ia7_A 203 ---TFD-ERFAFVGPTLTGRDG----------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIG 268 (402)
T ss_dssp ---GCC-TTEEECCCCCCC--------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECC
T ss_pred ---cCC-CCeEEeCCCCCCccc----------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeC
Confidence 012 368999987654321 124555455678999999998777777889999999988888888887
Q ss_pred CCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhhCCceeccc
Q 011396 317 SPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWP 396 (487)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P 396 (487)
..... +.+..+ .+|+.+.+|+|+..+|++++ ++|||||+||+.|++++|+|+|++|
T Consensus 269 ~~~~~-------------~~~~~~---------~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p 324 (402)
T 3ia7_A 269 GFLDP-------------AVLGPL---------PPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVP 324 (402)
T ss_dssp TTSCG-------------GGGCSC---------CTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECG
T ss_pred CcCCh-------------hhhCCC---------CCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeC
Confidence 64220 011112 34888999999999999999 9999999999999999999999999
Q ss_pred c-ccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHH
Q 011396 397 L-YAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQV 475 (487)
Q Consensus 397 ~-~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~ 475 (487)
. ..||+.||.++++ .|+|+.+..++ ++++.|.+++.++|+| +.++++++++++.+.+ .++..+.++.+
T Consensus 325 ~~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i 393 (402)
T 3ia7_A 325 HFATEAAPSAERVIE-LGLGSVLRPDQ---LEPASIREAVERLAAD---SAVRERVRRMQRDILS----SGGPARAADEV 393 (402)
T ss_dssp GGCGGGHHHHHHHHH-TTSEEECCGGG---CSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCHHHHHHHHH
T ss_pred CCcccHHHHHHHHHH-cCCEEEccCCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHhh----CChHHHHHHHH
Confidence 9 9999999999999 99999998877 8999999999999999 8999999999999884 56666666666
Q ss_pred HHHHHh
Q 011396 476 AQKWKN 481 (487)
Q Consensus 476 ~~~~~~ 481 (487)
.+.+.+
T Consensus 394 ~~~~~~ 399 (402)
T 3ia7_A 394 EAYLGR 399 (402)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 555543
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.2e-38 Score=319.08 Aligned_cols=359 Identities=14% Similarity=0.072 Sum_probs=236.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCC----CCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFD----DLPD 87 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~ 87 (487)
|||+|++.++.||++|+++||++|+++ ||+|++++++. .. .... ..++.+..++..... ..+.
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~---------~~-~~v~--~~g~~~~~l~~~~~~~~~~~~~~ 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPD---------YV-ERCA--EVGVPMVPVGRAVRAGAREPGEL 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGG---------GH-HHHH--HTTCCEEECSSCSSGGGSCTTCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHH---------HH-HHHH--HcCCceeecCCCHHHHhccccCC
Confidence 479999999999999999999999888 99999999875 22 2222 135667666533110 0000
Q ss_pred chhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcchH---HHHHHHhCCCeEEEecchHHHHHHHhhcccccc
Q 011396 88 DVRMETRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGSAA---FDVANEFGVPVYIFFTTTAMVLSLIFHLPELDV 164 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 164 (487)
.......+.. ......+.+.++. .+||+||+|..+..+ ..+|+.+|||++....++....+
T Consensus 68 ~~~~~~~~~~----~~~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~---------- 131 (404)
T 3h4t_A 68 PPGAAEVVTE----VVAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS---------- 131 (404)
T ss_dssp CTTCGGGHHH----HHHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG----------
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC----------
Confidence 0011111111 2222222222322 279999998655544 68999999999988766532100
Q ss_pred ccccCCCCCCCcccCCCCCccCcCCCCCCccc-cchHHHHHHHHHHhhhhcccE---------------EEEcchhhhch
Q 011396 165 KFSCEYRDVPEPVQLPGCVPINGRDFADPFQQ-RKNEAYRIFLSFSKQYLVAAG---------------IMVNSFMDLET 228 (487)
Q Consensus 165 ~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~---------------~l~~s~~~le~ 228 (487)
+.+ ...+. +....+..+....+..+...+ .+.+....+.+
T Consensus 132 ---------------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p 187 (404)
T 3h4t_A 132 ---------------EQS---------QAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSP 187 (404)
T ss_dssp ---------------GSC---------HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSC
T ss_pred ---------------hhH---------HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeC
Confidence 000 00000 000001111111111111111 11111111111
Q ss_pred HHHHHHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcC
Q 011396 229 GAFKALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMSG 308 (487)
Q Consensus 229 ~~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 308 (487)
. +.+ .++++++|++..+.... .++++.+|++.. +++|||++||+.. ..+.+..++++++..+
T Consensus 188 ~---------~~~-~~~~~~~G~~~~~~~~~-----~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~ 249 (404)
T 3h4t_A 188 L---------RPT-DLGTVQTGAWILPDQRP-----LSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQG 249 (404)
T ss_dssp C---------CTT-CCSCCBCCCCCCCCCCC-----CCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTT
T ss_pred C---------CCC-CCCeEEeCccccCCCCC-----CCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCC
Confidence 1 011 13688899876554322 567888898753 4699999999876 6678889999999999
Q ss_pred CceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhh
Q 011396 309 QRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVH 388 (487)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~ 388 (487)
.+++|+.+.... +. ..+ .+|+.+.+|+||.++|++++ +||||||+||+.|++++
T Consensus 250 ~~vv~~~g~~~~--------------~~-~~~---------~~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~ 303 (404)
T 3h4t_A 250 RRVVLSSGWAGL--------------GR-IDE---------GDDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRA 303 (404)
T ss_dssp CCEEEECTTTTC--------------CC-SSC---------CTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHH
T ss_pred CEEEEEeCCccc--------------cc-ccC---------CCCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHc
Confidence 999998886432 00 111 34889999999999999988 99999999999999999
Q ss_pred CCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCCh
Q 011396 389 GVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSS 468 (487)
Q Consensus 389 GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~ 468 (487)
|+|+|++|+..||+.||.++++ .|+|+.++..+ ++.+.|.++|.++++ +.|+++++++++.++ . .+.
T Consensus 304 GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~~~---~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~----~-~~~ 370 (404)
T 3h4t_A 304 GAPQVVVPQKADQPYYAGRVAD-LGVGVAHDGPT---PTVESLSAALATALT----PGIRARAAAVAGTIR----T-DGT 370 (404)
T ss_dssp TCCEEECCCSTTHHHHHHHHHH-HTSEEECSSSS---CCHHHHHHHHHHHTS----HHHHHHHHHHHTTCC----C-CHH
T ss_pred CCCEEEcCCcccHHHHHHHHHH-CCCEeccCcCC---CCHHHHHHHHHHHhC----HHHHHHHHHHHHHHh----h-hHH
Confidence 9999999999999999999999 99999998776 899999999999996 579999999988776 3 455
Q ss_pred HHHHHHHHHHHH
Q 011396 469 TKSLAQVAQKWK 480 (487)
Q Consensus 469 ~~~~~~~~~~~~ 480 (487)
.++++.+.+.+.
T Consensus 371 ~~~~~~i~~~~~ 382 (404)
T 3h4t_A 371 TVAAKLLLEAIS 382 (404)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555555544443
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.4e-35 Score=296.70 Aligned_cols=351 Identities=15% Similarity=0.095 Sum_probs=234.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCC-C-------
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSF-D------- 83 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~------- 83 (487)
+||++++.++.||++|+++||++|+++ ||+|++++++. ... ... ..++.+..++.... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~-Gh~V~~~~~~~---------~~~-~~~--~~g~~~~~~~~~~~~~~~~~~~~ 67 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQD---------MGP-VVT--GVGLPAVATTDLPIRHFITTDRE 67 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGG---------GHH-HHH--HTTCCEEESCSSCHHHHHHBCTT
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC-CCEEEEEeCHH---------HHH-HHH--hCCCEEEEeCCcchHHHHhhhcc
Confidence 479999999999999999999999887 99999999875 222 122 13466666654210 0
Q ss_pred CCC----CchhhHHHH-HHHH----HHhHHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHH
Q 011396 84 DLP----DDVRMETRI-TLTL----ARSLSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLS 154 (487)
Q Consensus 84 ~~~----~~~~~~~~~-~~~~----~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 154 (487)
..+ ........+ ...+ ......+.+.+ ++.+||+||+|....++..+|+.+|||++.+...+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l----~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~--- 140 (384)
T 2p6p_A 68 GRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFS----RAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD--- 140 (384)
T ss_dssp SCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC---
T ss_pred cCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHH----hccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc---
Confidence 011 110111111 1101 11223333333 3449999999988888889999999999876432100
Q ss_pred HHhhccccccccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhh--hhcccEEEEcchhhhchHHHH
Q 011396 155 LIFHLPELDVKFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQ--YLVAAGIMVNSFMDLETGAFK 232 (487)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~--~~~~~~~l~~s~~~le~~~~~ 232 (487)
+. . ..+........+...... ....+.++.++...++...
T Consensus 141 -------------------------~~-------~----~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-- 182 (384)
T 2p6p_A 141 -------------------------AD-------G----IHPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN-- 182 (384)
T ss_dssp -------------------------CT-------T----THHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT--
T ss_pred -------------------------cc-------h----hhHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC--
Confidence 00 0 001111111111111110 0114566777766655430
Q ss_pred HHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCC-----CHHHHHHHHHHHHhc
Q 011396 233 ALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTL-----SPEQLNELALGLEMS 307 (487)
Q Consensus 233 ~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~ 307 (487)
. +..+++.++++ . .+.++.+|++..+++++|||++||.... ..+.+..++++++..
T Consensus 183 ---~----~~~~~~~~~~~---~---------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~ 243 (384)
T 2p6p_A 183 ---A----APARMMRHVAT---S---------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW 243 (384)
T ss_dssp ---S----CCCEECCCCCC---C---------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT
T ss_pred ---C----CCCCceEecCC---C---------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC
Confidence 0 00012333321 1 1234557887655567999999998654 457788899999988
Q ss_pred CCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHh
Q 011396 308 GQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIV 387 (487)
Q Consensus 308 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~ 387 (487)
+.+++|+.+.... +.+. . ..+|+.+ +|+||.++|++++ +||||||+||++||++
T Consensus 244 ~~~~~~~~g~~~~---------------------~~l~-~-~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~ 297 (384)
T 2p6p_A 244 DVELIVAAPDTVA---------------------EALR-A-EVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLS 297 (384)
T ss_dssp TCEEEEECCHHHH---------------------HHHH-H-HCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHH
T ss_pred CcEEEEEeCCCCH---------------------HhhC-C-CCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHH
Confidence 9999998875211 1111 1 2458899 9999999998888 9999999999999999
Q ss_pred hCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCC
Q 011396 388 HGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGS 467 (487)
Q Consensus 388 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~ 467 (487)
+|+|+|++|...||+.||.++++ .|+|+.++..+ ++.++|.++|+++|+| +.++++++++++++++ .++
T Consensus 298 ~G~P~v~~p~~~dq~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~ 366 (384)
T 2p6p_A 298 AGVPQLLIPKGSVLEAPARRVAD-YGAAIALLPGE---DSTEAIADSCQELQAK---DTYARRAQDLSREISG----MPL 366 (384)
T ss_dssp TTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTC---CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCC
T ss_pred hCCCEEEccCcccchHHHHHHHH-CCCeEecCcCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----CCC
Confidence 99999999999999999999999 99999998766 8999999999999999 8999999999999985 344
Q ss_pred hHHHHHHHH
Q 011396 468 STKSLAQVA 476 (487)
Q Consensus 468 ~~~~~~~~~ 476 (487)
..++++.+.
T Consensus 367 ~~~~~~~i~ 375 (384)
T 2p6p_A 367 PATVVTALE 375 (384)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.7e-35 Score=300.72 Aligned_cols=380 Identities=18% Similarity=0.190 Sum_probs=243.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCCc
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPDD 88 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 88 (487)
|.++||+|++.++.||++|+++||++|+++ ||+|++++++. .... .. ..++.++.++..........
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~-G~~V~~~~~~~---------~~~~-~~--~~g~~~~~~~~~~~~~~~~~ 71 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPV---------FADK-VA--ATGPRPVLYHSTLPGPDADP 71 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGG---------GHHH-HH--TTSCEEEECCCCSCCTTSCG
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHC-CCeEEEEeCHH---------HHHH-HH--hCCCEEEEcCCcCccccccc
Confidence 446799999999999999999999999888 99999999876 2222 22 24677777764311111000
Q ss_pred ---hhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHHHHhhccccccc
Q 011396 89 ---VRMETRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDVK 165 (487)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (487)
..........+..........+.+++++.+||+||+|...+++..+|+.+|||++.+++.+........... ..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~---~~ 148 (430)
T 2iyf_A 72 EAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA---EP 148 (430)
T ss_dssp GGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH---HH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc---cc
Confidence 001111111111112223344455556779999999987778889999999999988765421000000000 00
Q ss_pred cccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHH-------hhhhcccEEEEcchhhhchHHHHHHhcCC
Q 011396 166 FSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFS-------KQYLVAAGIMVNSFMDLETGAFKALMEGD 238 (487)
Q Consensus 166 ~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~-------~~~~~~~~~l~~s~~~le~~~~~~~~~~~ 238 (487)
... .....++ .......+..+.... ......+.+++++...++... ..
T Consensus 149 ~~~------~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~- 203 (430)
T 2iyf_A 149 MWR------EPRQTER-------------GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA-----DR- 203 (430)
T ss_dssp HHH------HHHHSHH-------------HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG-----GG-
T ss_pred hhh------hhccchH-------------HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc-----cc-
Confidence 000 0000000 000000011111110 011135667788777665431 11
Q ss_pred CCCCCCC-eeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhc-CCceEEEEe
Q 011396 239 SSFKPPP-VYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMS-GQRFLWVVR 316 (487)
Q Consensus 239 ~~~~~p~-~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~ 316 (487)
+. ++ ++++||....... ..+|....+++++|||++||......+.+..++++++.. +.+++|.++
T Consensus 204 --~~-~~~v~~vG~~~~~~~~----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G 270 (430)
T 2iyf_A 204 --VD-EDVYTFVGACQGDRAE----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIG 270 (430)
T ss_dssp --SC-TTTEEECCCCC---------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC
T ss_pred --CC-CccEEEeCCcCCCCCC----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeC
Confidence 12 36 9999986543211 124555445677999999998755567788899999885 778888887
Q ss_pred CCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhhCCceeccc
Q 011396 317 SPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWP 396 (487)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P 396 (487)
..... +.+..+ .+|+.+.+|+||..+|++++ +||||||+||++||+++|+|+|++|
T Consensus 271 ~~~~~-------------~~l~~~---------~~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p 326 (430)
T 2iyf_A 271 RKVTP-------------AELGEL---------PDNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVP 326 (430)
T ss_dssp ---CG-------------GGGCSC---------CTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECC
T ss_pred CCCCh-------------HHhccC---------CCCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECC
Confidence 54220 001111 24888999999999999999 9999999999999999999999999
Q ss_pred cccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHH
Q 011396 397 LYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVA 476 (487)
Q Consensus 397 ~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 476 (487)
...||..|+.++++ .|+|+.++..+ ++.++|.++|.++++| +.+++++.++++.+.+ .++..+.++.+.
T Consensus 327 ~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 395 (430)
T 2iyf_A 327 QAVDQFGNADMLQG-LGVARKLATEE---ATADLLRETALALVDD---PEVARRLRRIQAEMAQ----EGGTRRAADLIE 395 (430)
T ss_dssp CSHHHHHHHHHHHH-TTSEEECCCC----CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HCHHHHHHHHHH
T ss_pred CccchHHHHHHHHH-cCCEEEcCCCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHHHHHH
Confidence 99999999999999 99999998766 8999999999999999 8899999999998875 244445554444
Q ss_pred H
Q 011396 477 Q 477 (487)
Q Consensus 477 ~ 477 (487)
+
T Consensus 396 ~ 396 (430)
T 2iyf_A 396 A 396 (430)
T ss_dssp T
T ss_pred H
Confidence 3
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=7.7e-35 Score=292.77 Aligned_cols=345 Identities=16% Similarity=0.145 Sum_probs=210.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCC--------
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPV-------- 80 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------- 80 (487)
..+|||+|++.++.||++|+++||++|.++ ||+|++++++. .... ... .++.+..++..
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~-GheV~v~~~~~---------~~~~-~~~--~G~~~~~~~~~~~~~~~~~ 79 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAA-GHEVLVAASEN---------MGPT-VTG--AGLPFAPTCPSLDMPEVLS 79 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEEGG---------GHHH-HHH--TTCCEEEEESSCCHHHHHS
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHC-CCEEEEEcCHH---------HHHH-HHh--CCCeeEecCCccchHhhhh
Confidence 446799999999999999999999999888 99999999865 2222 221 24455554421
Q ss_pred -----CCCCCCCch-hhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHHHH
Q 011396 81 -----SFDDLPDDV-RMETRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMVLS 154 (487)
Q Consensus 81 -----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 154 (487)
.....+... .........+..........+.+++++.+||+||+|...+++..+|+.+|||++.+.........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~ 159 (398)
T 4fzr_A 80 WDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL 159 (398)
T ss_dssp BCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH
T ss_pred hhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchh
Confidence 000011111 11111222222222222223333334459999999988888999999999998876543110000
Q ss_pred HHhhccccccccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhhh-----hcccEEEEcchhhhchH
Q 011396 155 LIFHLPELDVKFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQY-----LVAAGIMVNSFMDLETG 229 (487)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~~ 229 (487)
.... ....+....... ......+......+...
T Consensus 160 ---------------------------------------~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T 4fzr_A 160 ---------------------------------------IKSA---GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ 197 (398)
T ss_dssp ---------------------------------------HHHH---HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC--
T ss_pred ---------------------------------------hhHH---HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC
Confidence 0000 000001111111 11122333332222221
Q ss_pred HHHHHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCC--------CHHHHHHHH
Q 011396 230 AFKALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTL--------SPEQLNELA 301 (487)
Q Consensus 230 ~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~ 301 (487)
..+....+...... . ...++..|+...+++++|||++||.... ..+.+..++
T Consensus 198 ------------~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 4fzr_A 198 ------------PKPGTTKMRYVPYN---G-----RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALS 257 (398)
T ss_dssp --------------CCCEECCCCCCC---C-----SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHH
T ss_pred ------------CCCCCCCeeeeCCC---C-----CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHH
Confidence 00111111111000 0 1223446776555678999999998543 346688899
Q ss_pred HHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchh
Q 011396 302 LGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNS 381 (487)
Q Consensus 302 ~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt 381 (487)
++++..+.+++|+.++... +.+..+ .+|+.+.+|+|+.++|++++ +||||||.||
T Consensus 258 ~al~~~~~~~v~~~~~~~~--------------~~l~~~---------~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t 312 (398)
T 4fzr_A 258 QELPKLGFEVVVAVSDKLA--------------QTLQPL---------PEGVLAAGQFPLSAIMPACD--VVVHHGGHGT 312 (398)
T ss_dssp HHGGGGTCEEEECCCC----------------------C---------CTTEEEESCCCHHHHGGGCS--EEEECCCHHH
T ss_pred HHHHhCCCEEEEEeCCcch--------------hhhccC---------CCcEEEeCcCCHHHHHhhCC--EEEecCCHHH
Confidence 9999899999988876432 111122 34899999999999999998 9999999999
Q ss_pred HHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHh
Q 011396 382 ILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAAN 460 (487)
Q Consensus 382 ~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~ 460 (487)
+.||+++|+|+|++|...||+.|+.++++ .|+|+.++..+ ++++.|.++|.++|+| +.+++++++.++++.+
T Consensus 313 ~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 313 TLTCLSEGVPQVSVPVIAEVWDSARLLHA-AGAGVEVPWEQ---AGVESVLAACARIRDD---SSYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHHHTTCCEEECCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHC---THHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCccc---CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999 99999998776 8999999999999999 8999999999999874
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4.8e-34 Score=287.01 Aligned_cols=349 Identities=14% Similarity=0.125 Sum_probs=227.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCC-C----
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSF-D---- 83 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~---- 83 (487)
.++|||+|++.++.||++|+++||++|.++ ||+|+++++ . ....+ . ..++.+..++.... .
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~-~---------~~~~~-~--~~G~~~~~~~~~~~~~~~~~ 83 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTA-GHDVLIAVA-E---------HADRA-A--AAGLEVVDVAPDYSAVKVFE 83 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEES-S---------CHHHH-H--TTTCEEEESSTTCCHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHC-CCEEEEecc-c---------hHHHH-H--hCCCeeEecCCccCHHHHhh
Confidence 446799999999999999999999999888 999999998 5 22222 2 24677777764210 0
Q ss_pred ---------------CCCCchhhHHHH-HHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEec
Q 011396 84 ---------------DLPDDVRMETRI-TLTLARSLSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFT 147 (487)
Q Consensus 84 ---------------~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~ 147 (487)
............ ..........+.+.++++ +||+||+|...+++..+|+.+|||++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~ 159 (398)
T 3oti_A 84 QVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----RPDLVVYEQGATVGLLAADRAGVPAVQRNQ 159 (398)
T ss_dssp HHHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHHTCCEEEECC
T ss_pred hcccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCEEEECchhhHHHHHHHHcCCCEEEEec
Confidence 001111111111 122223445555555555 999999998888889999999999887543
Q ss_pred chHHHHHHHhhccccccccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhh-hhcccEEEEcchhhh
Q 011396 148 TTAMVLSLIFHLPELDVKFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQ-YLVAAGIMVNSFMDL 226 (487)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~l~~s~~~l 226 (487)
..... ..+ ........ ..+...... .......+......+
T Consensus 160 ~~~~~---------------------------~~~--------~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (398)
T 3oti_A 160 SAWRT---------------------------RGM--------HRSIASFL----TDLMDKHQVSLPEPVATIESFPPSL 200 (398)
T ss_dssp TTCCC---------------------------TTH--------HHHHHTTC----HHHHHHTTCCCCCCSEEECSSCGGG
T ss_pred cCCCc---------------------------cch--------hhHHHHHH----HHHHHHcCCCCCCCCeEEEeCCHHH
Confidence 21000 000 00000000 111111100 011122222222222
Q ss_pred chHHHHHHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCC--CHHHHHHHHHHH
Q 011396 227 ETGAFKALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTL--SPEQLNELALGL 304 (487)
Q Consensus 227 e~~~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al 304 (487)
... .. .. .. ++.++ |. . .+..+..|+...+++++|||++||.... ..+.+..+++++
T Consensus 201 ~~~-----~~-~~--~~-~~~~~-~~--~---------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l 259 (398)
T 3oti_A 201 LLE-----AE-PE--GW-FMRWV-PY--G---------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAA 259 (398)
T ss_dssp GTT-----SC-CC--SB-CCCCC-CC--C---------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHH
T ss_pred CCC-----CC-CC--CC-Ccccc-CC--C---------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHH
Confidence 111 00 00 00 11111 00 0 2234456776666678999999998442 567788899999
Q ss_pred HhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHH
Q 011396 305 EMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILE 384 (487)
Q Consensus 305 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~e 384 (487)
+..+.+++|+.++... +.+..+ .+|+.+.+|+|+.++|++++ +||||||.||+.|
T Consensus 260 ~~~~~~~v~~~g~~~~--------------~~l~~~---------~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~E 314 (398)
T 3oti_A 260 GEVDADFVLALGDLDI--------------SPLGTL---------PRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMT 314 (398)
T ss_dssp HTSSSEEEEECTTSCC--------------GGGCSC---------CTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHH
T ss_pred HcCCCEEEEEECCcCh--------------hhhccC---------CCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHH
Confidence 9889999998876432 111122 34899999999999999998 9999999999999
Q ss_pred HHhhCCceeccccccccchhh--HhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhc
Q 011396 385 SIVHGVPIIAWPLYAEQKMNA--VLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANAL 462 (487)
Q Consensus 385 al~~GvP~l~~P~~~DQ~~na--~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~ 462 (487)
|+++|+|+|++|+..||..|| .++++ .|+|+.++..+ .+.+.|. ++|+| +.++++++++++++.+
T Consensus 315 al~~G~P~v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~~~---~~~~~l~----~ll~~---~~~~~~~~~~~~~~~~-- 381 (398)
T 3oti_A 315 AIDAGIPQLLAPDPRDQFQHTAREAVSR-RGIGLVSTSDK---VDADLLR----RLIGD---ESLRTAAREVREEMVA-- 381 (398)
T ss_dssp HHHHTCCEEECCCTTCCSSCTTHHHHHH-HTSEEECCGGG---CCHHHHH----HHHHC---HHHHHHHHHHHHHHHT--
T ss_pred HHHhCCCEEEcCCCchhHHHHHHHHHHH-CCCEEeeCCCC---CCHHHHH----HHHcC---HHHHHHHHHHHHHHHh--
Confidence 999999999999999999999 99999 99999998876 7888887 78888 9999999999999985
Q ss_pred CCCCChHHHHHHH
Q 011396 463 SPDGSSTKSLAQV 475 (487)
Q Consensus 463 ~~~g~~~~~~~~~ 475 (487)
..+..+.++.+
T Consensus 382 --~~~~~~~~~~l 392 (398)
T 3oti_A 382 --LPTPAETVRRI 392 (398)
T ss_dssp --SCCHHHHHHHH
T ss_pred --CCCHHHHHHHH
Confidence 44444444433
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2.1e-32 Score=274.23 Aligned_cols=356 Identities=17% Similarity=0.127 Sum_probs=224.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeC-CCCC-C-----CC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFL-PPVS-F-----DD 84 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~-----~~ 84 (487)
|||+|++.++.||++|++.|+++|.++ ||+|++++++. ....... .++.+..+ +... . ..
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~-GheV~v~~~~~---------~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~ 68 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQAS-GHEVLIAAPPE---------LQATAHG---AGLTTAGIRGNDRTGDTGGTTQ 68 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHT-TCEEEEEECHH---------HHHHHHH---BTCEEEEC--------------
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHC-CCEEEEecChh---------hHHHHHh---CCCceeeecCCccchhhhhhhc
Confidence 589999999999999999999999888 99999998764 2222211 24555555 2110 0 00
Q ss_pred CC--------CchhhHHHHH-HHHHHh---HHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEecchHHH
Q 011396 85 LP--------DDVRMETRIT-LTLARS---LSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFTTTAMV 152 (487)
Q Consensus 85 ~~--------~~~~~~~~~~-~~~~~~---~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 152 (487)
.. .+........ ...... ++.....+.+++++.+||+||+|...+++..+|+.+|||++.+.......
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 69 LRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred ccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 00 0001111111 111112 01112233333444599999999877888899999999988764321000
Q ss_pred HHHHhhccccccccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhhh--hcccEEEEcchhhhchHH
Q 011396 153 LSLIFHLPELDVKFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQY--LVAAGIMVNSFMDLETGA 230 (487)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~--~~~~~~l~~s~~~le~~~ 230 (487)
. .............+....... .....++.....+++..
T Consensus 149 ---------------------------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (391)
T 3tsa_A 149 ---------------------------A-----------GPFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS- 189 (391)
T ss_dssp ---------------------------T-----------THHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-
T ss_pred ---------------------------c-----------ccccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-
Confidence 0 000000000111111111100 11133333333333221
Q ss_pred HHHHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCC--CC-HHHHHHHHHHHHhc
Q 011396 231 FKALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGT--LS-PEQLNELALGLEMS 307 (487)
Q Consensus 231 ~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~al~~~ 307 (487)
... ... ++.++ |. . ....+..|+...+++++|+|++||... .. .+.+..++++ +..
T Consensus 190 ----~~~---~~~-~~~~~-p~------~-----~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~ 248 (391)
T 3tsa_A 190 ----DAP---QGA-PVQYV-PY------N-----GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TEL 248 (391)
T ss_dssp ----TSC---CCE-ECCCC-CC------C-----CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS
T ss_pred ----CCC---ccC-Ceeee-cC------C-----CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccC
Confidence 000 000 11222 10 0 123344677665667899999999732 23 6778888888 777
Q ss_pred -CCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccchhHHHHH
Q 011396 308 -GQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESI 386 (487)
Q Consensus 308 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal 386 (487)
+.+++|+.++... +.+..+ .+|+.+.+|+|+.++|+.++ +||||||.||+.||+
T Consensus 249 p~~~~v~~~~~~~~--------------~~l~~~---------~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~ 303 (391)
T 3tsa_A 249 PGVEAVIAVPPEHR--------------ALLTDL---------PDNARIAESVPLNLFLRTCE--LVICAGGSGTAFTAT 303 (391)
T ss_dssp TTEEEEEECCGGGG--------------GGCTTC---------CTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHH
T ss_pred CCeEEEEEECCcch--------------hhcccC---------CCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHH
Confidence 7788888776432 111112 34888999999999998888 999999999999999
Q ss_pred hhCCceeccccccccchhhHhhhhhccceEEeee--cCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCC
Q 011396 387 VHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKV--NENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSP 464 (487)
Q Consensus 387 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~--~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~ 464 (487)
++|+|+|++|...||+.|+.++++ .|+|+.++. .+ .+++.|.+++.++|+| +.++++++++++.+.+
T Consensus 304 ~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~---~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~---- 372 (391)
T 3tsa_A 304 RLGIPQLVLPQYFDQFDYARNLAA-AGAGICLPDEQAQ---SDHEQFTDSIATVLGD---TGFAAAAIKLSDEITA---- 372 (391)
T ss_dssp HTTCCEEECCCSTTHHHHHHHHHH-TTSEEECCSHHHH---TCHHHHHHHHHHHHTC---THHHHHHHHHHHHHHT----
T ss_pred HhCCCEEecCCcccHHHHHHHHHH-cCCEEecCccccc---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHc----
Confidence 999999999999999999999999 999999987 66 7999999999999999 8999999999999984
Q ss_pred CCChHHHHHHHH
Q 011396 465 DGSSTKSLAQVA 476 (487)
Q Consensus 465 ~g~~~~~~~~~~ 476 (487)
.++..+.++.+.
T Consensus 373 ~~~~~~~~~~i~ 384 (391)
T 3tsa_A 373 MPHPAALVRTLE 384 (391)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 455545444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=5.8e-31 Score=265.56 Aligned_cols=362 Identities=15% Similarity=0.138 Sum_probs=235.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCC--------
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPV-------- 80 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------- 80 (487)
..+|||+|++.++.||++|+++||++|.++ ||+|++++++. . ..... ..++.+..++..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~---------~-~~~~~--~~g~~~~~~~~~~~~~~~~~ 84 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEG---------F-AGTLR--KLGFEPVATGMPVFDGFLAA 84 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGG---------G-HHHHH--HTTCEEEECCCCHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHH---------H-HHHHH--hcCCceeecCcccccchhhh
Confidence 456899999999999999999999999888 99999999875 2 22222 235777776630
Q ss_pred -----CCCCCC--CchhhHHHHHHHHH-----HhHHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEecc
Q 011396 81 -----SFDDLP--DDVRMETRITLTLA-----RSLSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFTT 148 (487)
Q Consensus 81 -----~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~ 148 (487)
.....+ ........+...+. .....+.+.+++ .+||+||+|....++..+|+.+|||++.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 85 LRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER----LRPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp HHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred hhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh----cCCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 000000 00111111111111 122344444444 49999999987777888999999998875432
Q ss_pred hHHHHHHHhhccccccccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhh-------hhcccEEEEc
Q 011396 149 TAMVLSLIFHLPELDVKFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQ-------YLVAAGIMVN 221 (487)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-------~~~~~~~l~~ 221 (487)
.... +++ ..+....+..+...... ....+.++..
T Consensus 161 ~~~~---------------------------~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~ 201 (412)
T 3otg_A 161 RDTP---------------------------DDL------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDI 201 (412)
T ss_dssp CCCC---------------------------SHH------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEEC
T ss_pred ccCc---------------------------hhh------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEee
Confidence 1100 000 00000011111111000 1233445544
Q ss_pred chhhhchHHHHHHhcCCCCCCCCCeeecccCcCCCCCCCCCCccccccccc-cccCCCCcEEEEEecCCCCCCHHHHHHH
Q 011396 222 SFMDLETGAFKALMEGDSSFKPPPVYPVGPLVQTGSTNETNNDRRHECLKW-LDEQPSESVLFVCFGSGGTLSPEQLNEL 300 (487)
Q Consensus 222 s~~~le~~~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~ 300 (487)
+...++.... .+ . ....++-+.... ...+...| ....+++++|++++||......+.+..+
T Consensus 202 ~~~~~~~~~~-~~-------~-~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 202 FPPSLQEPEF-RA-------R-PRRHELRPVPFA---------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp SCGGGSCHHH-HT-------C-TTEEECCCCCCC---------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred CCHHhcCCcc-cC-------C-CCcceeeccCCC---------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 4444332211 00 0 111111111111 11233356 3323456799999999875667888899
Q ss_pred HHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccccch
Q 011396 301 ALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWN 380 (487)
Q Consensus 301 ~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~g 380 (487)
+++++..+.+++|+.+.... .+.+..++ +++.+.+|+|+..+|++++ +||+|||+|
T Consensus 264 ~~~l~~~~~~~~~~~g~~~~-------------~~~l~~~~---------~~v~~~~~~~~~~~l~~ad--~~v~~~g~~ 319 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSLD-------------VSGLGEVP---------ANVRLESWVPQAALLPHVD--LVVHHGGSG 319 (412)
T ss_dssp HHHHHTSSSEEEEECCSSCC-------------CTTCCCCC---------TTEEEESCCCHHHHGGGCS--EEEESCCHH
T ss_pred HHHHHcCCCEEEEEECCCCC-------------hhhhccCC---------CcEEEeCCCCHHHHHhcCc--EEEECCchH
Confidence 99999888899998887531 01122222 4788999999999999999 999999999
Q ss_pred hHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHh
Q 011396 381 SILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAAN 460 (487)
Q Consensus 381 t~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~ 460 (487)
|+.||+++|+|+|++|...||..|+.++++ .|+|+.++..+ +++++|.++|.++|+| +.+++++.+.++++.+
T Consensus 320 t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 320 TTLGALGAGVPQLSFPWAGDSFANAQAVAQ-AGAGDHLLPDN---ISPDSVSGAAKRLLAE---ESYRAGARAVAAEIAA 392 (412)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECCGGG---CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCccc---CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999 99999998876 8999999999999999 8999999999999885
Q ss_pred hcCCCCChHHHHHHHHHHH
Q 011396 461 ALSPDGSSTKSLAQVAQKW 479 (487)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~ 479 (487)
..+..+.++.+.+.+
T Consensus 393 ----~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 393 ----MPGPDEVVRLLPGFA 407 (412)
T ss_dssp ----SCCHHHHHTTHHHHH
T ss_pred ----CCCHHHHHHHHHHHh
Confidence 445555555554443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=3.4e-29 Score=248.16 Aligned_cols=310 Identities=16% Similarity=0.116 Sum_probs=190.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCCchh
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPDDVR 90 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 90 (487)
+++|+++..|+.||++|.++||++|.++ ||+|+|++++. . ....+... .++.+..++......- ....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~----g----~e~~~v~~--~g~~~~~i~~~~~~~~-~~~~ 69 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPR----G----IENDLVPK--AGLPLHLIQVSGLRGK-GLKS 69 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSS----S----THHHHTGG--GTCCEEECC------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCc----h----Hhhchhhh--cCCcEEEEECCCcCCC-CHHH
Confidence 4689999988889999999999999888 99999999765 1 11222321 3566666664322110 0011
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcch--HHHHHHHhCCCeEEEecchHHHHHHHhhcccccccccc
Q 011396 91 METRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGSA--AFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDVKFSC 168 (487)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (487)
..... ..+..........++++ +||+||++..... +..+|+.+|||+++.-.
T Consensus 70 ~~~~~-~~~~~~~~~~~~~l~~~----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~--------------------- 123 (365)
T 3s2u_A 70 LVKAP-LELLKSLFQALRVIRQL----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ--------------------- 123 (365)
T ss_dssp ---CH-HHHHHHHHHHHHHHHHH----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC---------------------
T ss_pred HHHHH-HHHHHHHHHHHHHHHhc----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec---------------------
Confidence 11111 11122223344455554 9999999864443 45789999999875211
Q ss_pred CCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhhhhcccEEEEcchhhhchHHHHHHhcCCCCCCCCCeee
Q 011396 169 EYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQYLVAAGIMVNSFMDLETGAFKALMEGDSSFKPPPVYP 248 (487)
Q Consensus 169 ~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~~~~ 248 (487)
..+||+. .++. .+.++.+ +.++.+.-. ...+.++
T Consensus 124 --------n~~~G~~-------------------nr~l-----~~~a~~v-~~~~~~~~~-------------~~~k~~~ 157 (365)
T 3s2u_A 124 --------NAVAGTA-------------------NRSL-----APIARRV-CEAFPDTFP-------------ASDKRLT 157 (365)
T ss_dssp --------SSSCCHH-------------------HHHH-----GGGCSEE-EESSTTSSC-------------C---CEE
T ss_pred --------chhhhhH-------------------HHhh-----cccccee-eeccccccc-------------CcCcEEE
Confidence 1124420 1111 1223333 233332111 1135677
Q ss_pred cccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhc----CCceEEEEeCCcccccc
Q 011396 249 VGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMS----GQRFLWVVRSPHERAAN 324 (487)
Q Consensus 249 vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~ 324 (487)
+|+.......... . ......++++.|+|..||.... .....+.++++.. +..++|..+....
T Consensus 158 ~g~pvr~~~~~~~------~--~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~---- 223 (365)
T 3s2u_A 158 TGNPVRGELFLDA------H--ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHA---- 223 (365)
T ss_dssp CCCCCCGGGCCCT------T--SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTH----
T ss_pred ECCCCchhhccch------h--hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcccc----
Confidence 8865443321110 0 1112223456899999997543 2333455666554 3456666654322
Q ss_pred ccccccCCCCCCCCCCchhHHHhh--cCCCeeecccCCc-cccccccccccccccccchhHHHHHhhCCceeccccc---
Q 011396 325 ATYFGIQSMKDPFDFLPKGFLDRT--KGVGLVVPSWSPQ-VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY--- 398 (487)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~~~~~--~~~~v~~~~~~pq-~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~--- 398 (487)
+...+.. ...++.+.+|+++ ..+|+.+| ++|||+|++|+.|++++|+|+|++|+.
T Consensus 224 -----------------~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~ 284 (365)
T 3s2u_A 224 -----------------EITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAI 284 (365)
T ss_dssp -----------------HHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----
T ss_pred -----------------ccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCC
Confidence 2222222 2346778899998 68999999 999999999999999999999999974
Q ss_pred -cccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccC
Q 011396 399 -AEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQG 441 (487)
Q Consensus 399 -~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 441 (487)
.+|..||+.+++ .|+|+.++..+ ++++.|.++|.++|+|
T Consensus 285 ~~~Q~~NA~~l~~-~G~a~~l~~~~---~~~~~L~~~i~~ll~d 324 (365)
T 3s2u_A 285 DDHQTRNAEFLVR-SGAGRLLPQKS---TGAAELAAQLSEVLMH 324 (365)
T ss_dssp CCHHHHHHHHHHT-TTSEEECCTTT---CCHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHH-CCCEEEeecCC---CCHHHHHHHHHHHHCC
Confidence 489999999999 99999998877 9999999999999999
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=8.6e-27 Score=205.36 Aligned_cols=162 Identities=26% Similarity=0.409 Sum_probs=138.4
Q ss_pred cccccccccccCCCCcEEEEEecCCC-CCCHHHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchh
Q 011396 265 RRHECLKWLDEQPSESVLFVCFGSGG-TLSPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKG 343 (487)
Q Consensus 265 ~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (487)
++.++.+|++..+++++|||++||.. ....+.+..++++++..+.+++|+.++... ..++
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-----------------~~~~-- 67 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP-----------------DTLG-- 67 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-----------------TTCC--
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-----------------ccCC--
Confidence 67889999987666789999999985 456778889999999888999999876422 1122
Q ss_pred HHHhhcCCCeeecccCCccccccccccccccccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCC
Q 011396 344 FLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNEN 423 (487)
Q Consensus 344 ~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 423 (487)
.|+.+.+|+||..++.|+.+++||||||+||++|++++|+|+|++|...||..||.++++ .|+|+.++..+
T Consensus 68 -------~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~- 138 (170)
T 2o6l_A 68 -------LNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNT- 138 (170)
T ss_dssp -------TTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTT-
T ss_pred -------CcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecccc-
Confidence 378899999999999665555999999999999999999999999999999999999999 99999998776
Q ss_pred CCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Q 011396 424 GLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAA 459 (487)
Q Consensus 424 ~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~ 459 (487)
++.++|.++|.++++| +.|+++++++++.++
T Consensus 139 --~~~~~l~~~i~~ll~~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 139 --MSSTDLLNALKRVIND---PSYKENVMKLSRIQH 169 (170)
T ss_dssp --CCHHHHHHHHHHHHHC---HHHHHHHHHHC----
T ss_pred --CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHhh
Confidence 8999999999999999 899999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.84 E-value=4e-19 Score=175.67 Aligned_cols=338 Identities=14% Similarity=0.095 Sum_probs=203.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCCchhh
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPDDVRM 91 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 91 (487)
+||++++.+..||..+++.||++|.++ ||+|++++... . ....... ..++.+..++.... .... .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~----~----~~~~~~~--~~g~~~~~~~~~~~---~~~~-~ 71 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTAD----R----MEADLVP--KHGIEIDFIRISGL---RGKG-I 71 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTT----S----THHHHGG--GGTCEEEECCCCCC---TTCC-H
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc-CCEEEEEecCC----c----chhhhcc--ccCCceEEecCCcc---CcCc-c
Confidence 789999988789999999999999887 99999999764 1 1111122 12566666654221 1110 0
Q ss_pred HHHHH--HHHHHhHHHHHHHHHHHhcCCCceEEEeCCCc--chHHHHHHHhCCCeEEEecchHHHHHHHhhccccccccc
Q 011396 92 ETRIT--LTLARSLSSLRDALKVLAESTRLVALVVDIFG--SAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDVKFS 167 (487)
Q Consensus 92 ~~~~~--~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 167 (487)
...+. .........+.+.+++ .+||+|+++... ..+..+++.+|+|+++.....
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~l~~----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------------ 129 (364)
T 1f0k_A 72 KALIAAPLRIFNAWRQARAIMKA----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------------ 129 (364)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHH----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC------------------
Confidence 11110 0111122334444444 399999998643 335568888999987532210
Q ss_pred cCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhhhhcccEEEEcchhhhchHHHHHHhcCCCCCCCCCee
Q 011396 168 CEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQYLVAAGIMVNSFMDLETGAFKALMEGDSSFKPPPVY 247 (487)
Q Consensus 168 ~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~~~ 247 (487)
++++ ... . ..+.++.++..+-.. +|++.
T Consensus 130 -----------~~~~-------------------~~~---~--~~~~~d~v~~~~~~~-----------------~~~~~ 157 (364)
T 1f0k_A 130 -----------IAGL-------------------TNK---W--LAKIATKVMQAFPGA-----------------FPNAE 157 (364)
T ss_dssp -----------SCCH-------------------HHH---H--HTTTCSEEEESSTTS-----------------SSSCE
T ss_pred -----------CCcH-------------------HHH---H--HHHhCCEEEecChhh-----------------cCCce
Confidence 0110 000 1 123345555443211 12445
Q ss_pred ecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhc--CCceEEEEeCCccccccc
Q 011396 248 PVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMS--GQRFLWVVRSPHERAANA 325 (487)
Q Consensus 248 ~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~ 325 (487)
.+|......... . ......+...+++++|++..|+... .+....++++++.. +.++++..|....
T Consensus 158 ~i~n~v~~~~~~-----~-~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~----- 224 (364)
T 1f0k_A 158 VVGNPVRTDVLA-----L-PLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQ----- 224 (364)
T ss_dssp ECCCCCCHHHHT-----S-CCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCH-----
T ss_pred EeCCccchhhcc-----c-chhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchH-----
Confidence 565432211000 0 0001112122234567777788633 34445566666654 3455566665321
Q ss_pred cccccCCCCCCCCCCchhHHHhh---cCCCeeecccCCc-cccccccccccccccccchhHHHHHhhCCceeccccc---
Q 011396 326 TYFGIQSMKDPFDFLPKGFLDRT---KGVGLVVPSWSPQ-VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY--- 398 (487)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~~~~~---~~~~v~~~~~~pq-~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~--- 398 (487)
+.+.+.. .-++|.+.+|+++ ..+++.++ ++|+++|.+++.||+++|+|+|+.|..
T Consensus 225 ----------------~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 225 ----------------QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp ----------------HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTT
T ss_pred ----------------HHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCc
Confidence 2222222 2247888999965 88999999 999999999999999999999999988
Q ss_pred cccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 011396 399 AEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQK 478 (487)
Q Consensus 399 ~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 478 (487)
.||..|+..+.+ .|.|+.++..+ ++.++++++|.++ | +..++++.+-+.+.. +..+.++.++.+.+.
T Consensus 287 ~~q~~~~~~~~~-~g~g~~~~~~d---~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 353 (364)
T 1f0k_A 287 RQQYWNALPLEK-AGAAKIIEQPQ---LSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRV 353 (364)
T ss_dssp CHHHHHHHHHHH-TTSEEECCGGG---CCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHh-CCcEEEecccc---CCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHH
Confidence 799999999999 89999988765 7899999999999 6 666665554444332 345555666666655
Q ss_pred HHhh
Q 011396 479 WKNL 482 (487)
Q Consensus 479 ~~~~ 482 (487)
+++.
T Consensus 354 y~~~ 357 (364)
T 1f0k_A 354 ARAL 357 (364)
T ss_dssp HTTC
T ss_pred HHHH
Confidence 5543
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=1.4e-15 Score=137.53 Aligned_cols=147 Identities=18% Similarity=0.157 Sum_probs=95.4
Q ss_pred CCCCcEEEEEecCCCCCCHHHHHHH-----HHHHHhcC-CceEEEEeCCccccccc---cccccCCCCCCCCCCchh---
Q 011396 276 QPSESVLFVCFGSGGTLSPEQLNEL-----ALGLEMSG-QRFLWVVRSPHERAANA---TYFGIQSMKDPFDFLPKG--- 343 (487)
Q Consensus 276 ~~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~--- 343 (487)
.+++++|||+.||... -.+.+..+ +++|...+ .++++++|....+.... .|.. +.. .. .+|.+
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~-~~~-~~--l~p~~~~~ 99 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGG-QRE-SQ--KIPIDQFG 99 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTC-EEC-SC--CCSSCTTC
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhc-ccc-cc--cccccccc
Confidence 3456799999999732 23433433 47887777 78899988653200000 0000 000 00 00100
Q ss_pred ----HHH---hhcCCCeeecccCCc-ccccc-ccccccccccccchhHHHHHhhCCceeccccc----cccchhhHhhhh
Q 011396 344 ----FLD---RTKGVGLVVPSWSPQ-VQVLR-HGSTGGFLSHCGWNSILESIVHGVPIIAWPLY----AEQKMNAVLLID 410 (487)
Q Consensus 344 ----~~~---~~~~~~v~~~~~~pq-~~~L~-~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~----~DQ~~na~~v~~ 410 (487)
... .....++.+.+|+++ ..+|+ .++ ++|||||+||++|++++|+|+|++|.. .||..||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~ 177 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH
Confidence 000 000124556788888 58899 999 999999999999999999999999984 379999999999
Q ss_pred hccceEEeeecCCCCcCHHHHHHHHHHh
Q 011396 411 DLKVSFRVKVNENGLVGREDIANYAKGL 438 (487)
Q Consensus 411 ~~G~G~~l~~~~~~~~~~~~l~~~i~~l 438 (487)
.|+++.+ +.+.|.++|.++
T Consensus 178 -~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 -LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp -HSCCCEE--------CSCTTTHHHHHH
T ss_pred -CCCEEEc--------CHHHHHHHHHHH
Confidence 9998765 345666777666
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.50 E-value=5e-13 Score=125.82 Aligned_cols=117 Identities=11% Similarity=0.057 Sum_probs=89.6
Q ss_pred CcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhh-cCCCeeecc
Q 011396 279 ESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRT-KGVGLVVPS 357 (487)
Q Consensus 279 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~ 357 (487)
.+.|+|++|... ..+....++++|.... ++.++.+.... ..+.+.... +..|+.+..
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~-------------------~~~~l~~~~~~~~~v~v~~ 214 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP-------------------NLKKLQKFAKLHNNIRLFI 214 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT-------------------THHHHHHHHHTCSSEEEEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch-------------------HHHHHHHHHhhCCCEEEEe
Confidence 468999999753 2245666778776544 56666665422 123333322 234899999
Q ss_pred cCCc-cccccccccccccccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeec
Q 011396 358 WSPQ-VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVN 421 (487)
Q Consensus 358 ~~pq-~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 421 (487)
|+++ ..++..+| ++|++|| +|+.|+++.|+|+|++|+..+|..||..+++ .|+++.+..-
T Consensus 215 ~~~~m~~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~~ 275 (282)
T 3hbm_A 215 DHENIAKLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKYL 275 (282)
T ss_dssp SCSCHHHHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGGG
T ss_pred CHHHHHHHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcchh
Confidence 9998 67999999 9999999 8999999999999999999999999999999 9999998754
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.32 E-value=9.3e-10 Score=110.99 Aligned_cols=113 Identities=14% Similarity=0.051 Sum_probs=76.5
Q ss_pred CCeeecccCCc---ccccccccccccccc----ccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCC
Q 011396 351 VGLVVPSWSPQ---VQVLRHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNEN 423 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~~~~~~I~H----GG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 423 (487)
++|.+.+++|+ ..++..++ ++|.- |...++.||+++|+|+|+.+. ......+.+ -+.|+.++.
T Consensus 306 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~--- 375 (438)
T 3c48_A 306 KRIRFLDPRPPSELVAVYRAAD--IVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAE-GETGLLVDG--- 375 (438)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCB-TTTEEEESS---
T ss_pred CcEEEcCCCChHHHHHHHHhCC--EEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhC-CCcEEECCC---
Confidence 57889999986 56788888 66643 445689999999999998764 344555666 567887754
Q ss_pred CCcCHHHHHHHHHHhccCch-hHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 011396 424 GLVGREDIANYAKGLIQGEE-GKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNLE 483 (487)
Q Consensus 424 ~~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 483 (487)
-+.++++++|.++++|++ ...+.+++++..+. -+.+..++++.+.+++..
T Consensus 376 --~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~--------~s~~~~~~~~~~~~~~~~ 426 (438)
T 3c48_A 376 --HSPHAWADALATLLDDDETRIRMGEDAVEHART--------FSWAATAAQLSSLYNDAI 426 (438)
T ss_dssp --CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh--------CCHHHHHHHHHHHHHHHh
Confidence 378999999999999833 23344444444433 234445555555555544
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.30 E-value=1.2e-09 Score=108.42 Aligned_cols=350 Identities=12% Similarity=0.044 Sum_probs=183.1
Q ss_pred CCCCcEEEEEcC--C--CccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhh-hhhhcCCCCceEEeCCCCCC
Q 011396 8 QIPRAHVAMVPT--P--GIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQR-QVLESLPTSISTIFLPPVSF 82 (487)
Q Consensus 8 ~~~~~~Il~~~~--~--~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~ 82 (487)
|++++||++++. + ..|.-.-+..|++.| + ||+|++++... . ... .... -..++....++....
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~-g~~v~v~~~~~----~----~~~~~~~~-~~~~~~~~~~~~~~~ 68 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D-PESIVVFASTQ----N----AEEAHAYD-KTLDYEVIRWPRSVM 68 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C-GGGEEEEEECS----S----HHHHHHHH-TTCSSEEEEESSSSC
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--c-CCeEEEEECCC----C----ccchhhhc-cccceEEEEcccccc
Confidence 455678888874 3 468888899999999 5 99999999775 1 110 1111 134566666654211
Q ss_pred CCCCCchhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcc--hHHHHHHHhCCCeEE-EecchHHHHHHHhhc
Q 011396 83 DDLPDDVRMETRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGS--AAFDVANEFGVPVYI-FFTTTAMVLSLIFHL 159 (487)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~--~~~~~A~~lgIP~v~-~~~~~~~~~~~~~~~ 159 (487)
+. .. .....+.+.+ ++.+||+|++..... ....+++.+++|.++ ..+.....
T Consensus 69 --~~-~~-----------~~~~~l~~~~----~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------- 123 (394)
T 3okp_A 69 --LP-TP-----------TTAHAMAEII----REREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG------- 123 (394)
T ss_dssp --CS-CH-----------HHHHHHHHHH----HHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH-------
T ss_pred --cc-ch-----------hhHHHHHHHH----HhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh-------
Confidence 11 00 1122233333 344999999765333 344578889998444 33321110
Q ss_pred cccccccccCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhhhhcccEEEEcchhhhchHHHHHHhcCCC
Q 011396 160 PELDVKFSCEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQYLVAAGIMVNSFMDLETGAFKALMEGDS 239 (487)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 239 (487)
+. .......+.+ ...+.++.+++.|-...+. +...+..
T Consensus 124 -------------------~~-----------------~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~-~~~~~~~--- 161 (394)
T 3okp_A 124 -------------------WS-----------------MLPGSRQSLR--KIGTEVDVLTYISQYTLRR-FKSAFGS--- 161 (394)
T ss_dssp -------------------HT-----------------TSHHHHHHHH--HHHHHCSEEEESCHHHHHH-HHHHHCS---
T ss_pred -------------------hh-----------------hcchhhHHHH--HHHHhCCEEEEcCHHHHHH-HHHhcCC---
Confidence 00 0001111111 2235677787777443222 2222211
Q ss_pred CCCCCCeeecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhc-----CCceEEE
Q 011396 240 SFKPPPVYPVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMS-----GQRFLWV 314 (487)
Q Consensus 240 ~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~ 314 (487)
. .++..+..-.....-.........++.+-+.. +++..+++..|+... .+.+..++++++.. +.+++ .
T Consensus 162 --~-~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~-i 234 (394)
T 3okp_A 162 --H-PTFEHLPSGVDVKRFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLL-I 234 (394)
T ss_dssp --S-SEEEECCCCBCTTTSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEE-E
T ss_pred --C-CCeEEecCCcCHHHcCCCCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEE-E
Confidence 1 24555543332221110000011222222222 223356777788522 22344444444332 33433 3
Q ss_pred EeCCccccccccccccCCCCCCCCCCchhHHHhhc--CCCeeecccCCc---cccccccccccccc-----------ccc
Q 011396 315 VRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTK--GVGLVVPSWSPQ---VQVLRHGSTGGFLS-----------HCG 378 (487)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~~~~pq---~~~L~~~~~~~~I~-----------HGG 378 (487)
+|.... .+.+..... .++|.+.+++|+ ..++..++ ++|. -|.
T Consensus 235 ~G~g~~--------------------~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e~~ 292 (394)
T 3okp_A 235 VGSGRY--------------------ESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVEGL 292 (394)
T ss_dssp ECCCTT--------------------HHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCCSS
T ss_pred EcCchH--------------------HHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC--EEEecCcccccccccccc
Confidence 343211 122222211 257889999975 45788888 6665 566
Q ss_pred chhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHH-
Q 011396 379 WNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDA- 457 (487)
Q Consensus 379 ~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~- 457 (487)
..++.||+++|+|+|+.+.. .....+.+ |.|+.++. -+.+++.++|.++++| +..+++..+-+..
T Consensus 293 ~~~~~Ea~a~G~PvI~~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~ 358 (394)
T 3okp_A 293 GIVYLEAQACGVPVIAGTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELLIELLDD---PIRRAAMGAAGRAH 358 (394)
T ss_dssp CHHHHHHHHTTCCEEECSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHHHHHHTC---HHHHHHHHHHHHHH
T ss_pred CcHHHHHHHcCCCEEEeCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHH
Confidence 78999999999999997643 33334444 47777764 3799999999999998 4433333222222
Q ss_pred HHhhcCCCCChHHHHHHHHHHHHhhh
Q 011396 458 AANALSPDGSSTKSLAQVAQKWKNLE 483 (487)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~~ 483 (487)
++ +.-+.+..++++.+.++++.
T Consensus 359 ~~----~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 359 VE----AEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HH----HHTBHHHHHHHHHHHHHSCC
T ss_pred HH----HhCCHHHHHHHHHHHHHHhc
Confidence 22 22366677777777777765
No 27
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.28 E-value=6.8e-11 Score=118.04 Aligned_cols=108 Identities=18% Similarity=0.139 Sum_probs=75.8
Q ss_pred CCeeecccCCc---cccccccccccccccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcC
Q 011396 351 VGLVVPSWSPQ---VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVG 427 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 427 (487)
+++.+.+++++ ..+++.++ ++|+-.|..+ .||.++|+|+|++|-..+++. +.+ .|.|+.+. .+
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad--~vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~-~g~~~lv~------~d 347 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSY--LVFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIE-AGTLKLIG------TN 347 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEE--EEEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHH-HTSEEECC------SC
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCccHH-HHHHHhCCCEEEecCCCcchh----hee-CCcEEEcC------CC
Confidence 57888888763 67888899 8998875333 799999999999976666654 245 68887764 37
Q ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHH
Q 011396 428 REDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKW 479 (487)
Q Consensus 428 ~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 479 (487)
+++|.+++.++++| +..++++.+ ..+ ..+.++++.+.++.+.+.+
T Consensus 348 ~~~l~~ai~~ll~~---~~~~~~m~~---~~~-~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 348 KENLIKEALDLLDN---KESHDKMAQ---AAN-PYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHHH---SCC-TTCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---HHHHHHHHh---hcC-cccCCcHHHHHHHHHHHHh
Confidence 89999999999998 666654432 222 1234566555555555444
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.27 E-value=1.1e-10 Score=116.20 Aligned_cols=335 Identities=13% Similarity=0.050 Sum_probs=170.0
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCC
Q 011396 8 QIPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPD 87 (487)
Q Consensus 8 ~~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 87 (487)
++.|++|++++ |++....=+..|.++|.++.|+++.++.+.. .. ......+..+..... ..+... . .
T Consensus 22 ~~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~----h~--~~~~~~~~~~~i~~~-~~l~~~---~--~ 88 (396)
T 3dzc_A 22 SNAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQ----HR--EMLDQVLELFSITPD-FDLNIM---E--P 88 (396)
T ss_dssp --CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCS----SS--HHHHHHHHHTTCCCS-EECCCC---C--T
T ss_pred hCCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecc----cH--HHHHHHHHhcCCCCc-eeeecC---C--C
Confidence 35567888887 7777777788899999776478988777765 11 112333333322111 122110 0 1
Q ss_pred chhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEe--CCCc-chHHHHHHHhCCCeEEEecchHHHHHHHhhcccccc
Q 011396 88 DVRMETRITLTLARSLSSLRDALKVLAESTRLVALVV--DIFG-SAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDV 164 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~--D~~~-~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 164 (487)
+.. +..........+.+.++++ +||+|++ |..+ ..+..+|..+|||++.+..
T Consensus 89 ~~~----~~~~~~~~~~~l~~~l~~~----kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~a----------------- 143 (396)
T 3dzc_A 89 GQT----LNGVTSKILLGMQQVLSSE----QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEA----------------- 143 (396)
T ss_dssp TCC----HHHHHHHHHHHHHHHHHHH----CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETC-----------------
T ss_pred CCC----HHHHHHHHHHHHHHHHHhc----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC-----------------
Confidence 111 1122344455666666665 9999885 3333 3346789999999765311
Q ss_pred ccccCCCCCCCcccCCCCCccCc-CCCCCCccccchHHHHHHHHHHhhhhcccEEEEcchhhhchHHHHHHhcCCCCCCC
Q 011396 165 KFSCEYRDVPEPVQLPGCVPING-RDFADPFQQRKNEAYRIFLSFSKQYLVAAGIMVNSFMDLETGAFKALMEGDSSFKP 243 (487)
Q Consensus 165 ~~~~~~~~~~~~~~~pg~~~~~~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~ 243 (487)
++..... ..++ + ...+.. ....++.++.++-... .. ..+... ..
T Consensus 144 ----------------g~rs~~~~~~~~----~-------~~~r~~-~~~~a~~~~~~se~~~-~~---l~~~G~---~~ 188 (396)
T 3dzc_A 144 ----------------GLRTGNIYSPWP----E-------EGNRKL-TAALTQYHFAPTDTSR-AN---LLQENY---NA 188 (396)
T ss_dssp ----------------CCCCSCTTSSTT----H-------HHHHHH-HHHTCSEEEESSHHHH-HH---HHHTTC---CG
T ss_pred ----------------CccccccccCCc----H-------HHHHHH-HHHhcCEEECCCHHHH-HH---HHHcCC---Cc
Confidence 0000000 0000 0 001110 0123445555553211 11 111111 11
Q ss_pred CCeeecccCcCCCCCCCCCCc-c----ccccccccc-cCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhc-----CCceE
Q 011396 244 PPVYPVGPLVQTGSTNETNND-R----RHECLKWLD-EQPSESVLFVCFGSGGTLSPEQLNELALGLEMS-----GQRFL 312 (487)
Q Consensus 244 p~~~~vGp~~~~~~~~~~~~~-~----~~~~~~~l~-~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i 312 (487)
.++..+|....+......... . ..++.+-+. -.++++.|+++.+-...... .+..++++++.. +.+++
T Consensus 189 ~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v 267 (396)
T 3dzc_A 189 ENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQIL 267 (396)
T ss_dssp GGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEE
T ss_pred CcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEE
Confidence 268889843222100000000 0 022222222 11335577776532222222 245666666543 34555
Q ss_pred EEEeCCccccccccccccCCCCCCCCCCchhHHHhh-cCCCeeecccCC---ccccccccccccccccccchhHHHHHhh
Q 011396 313 WVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRT-KGVGLVVPSWSP---QVQVLRHGSTGGFLSHCGWNSILESIVH 388 (487)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~p---q~~~L~~~~~~~~I~HGG~gt~~eal~~ 388 (487)
+..+.+.. +-+.+.... ..+++.+.++++ ...+++.++ ++|+-.| |.+.||.++
T Consensus 268 ~~~g~~~~-------------------~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~ 325 (396)
T 3dzc_A 268 YPVHLNPN-------------------VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEEAPSL 325 (396)
T ss_dssp EECCBCHH-------------------HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTTGGGG
T ss_pred EEeCCChH-------------------HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHc
Confidence 54443211 001122111 135788867664 367888888 9999987 666899999
Q ss_pred CCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHH
Q 011396 389 GVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMR 452 (487)
Q Consensus 389 GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~ 452 (487)
|+|+|+..-..+++ .+.+ .|.++.+. .++++|.+++.++++| +..++++.
T Consensus 326 G~PvV~~~~~~~~~----e~v~-~G~~~lv~------~d~~~l~~ai~~ll~d---~~~~~~m~ 375 (396)
T 3dzc_A 326 GKPVLVMRETTERP----EAVA-AGTVKLVG------TNQQQICDALSLLLTD---PQAYQAMS 375 (396)
T ss_dssp TCCEEECCSSCSCH----HHHH-HTSEEECT------TCHHHHHHHHHHHHHC---HHHHHHHH
T ss_pred CCCEEEccCCCcch----HHHH-cCceEEcC------CCHHHHHHHHHHHHcC---HHHHHHHh
Confidence 99999975555543 2445 58775553 3689999999999998 66655444
No 29
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.22 E-value=2.5e-08 Score=99.04 Aligned_cols=116 Identities=15% Similarity=0.100 Sum_probs=77.3
Q ss_pred CCeeecccCCc-ccccccccccccc----ccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCC
Q 011396 351 VGLVVPSWSPQ-VQVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGL 425 (487)
Q Consensus 351 ~~v~~~~~~pq-~~~L~~~~~~~~I----~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 425 (487)
++|.+.++..+ ..++..++ ++| ..|..+++.||+++|+|+|+.+.. .....+.+ -+.|+.++.
T Consensus 267 ~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~-~~~g~~~~~----- 334 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQH-GDTGYLCEV----- 334 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCB-TTTEEEECT-----
T ss_pred CeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhc-CCceEEeCC-----
Confidence 46777776554 67888888 777 567778999999999999987653 33344555 567877754
Q ss_pred cCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhhh
Q 011396 426 VGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNLES 484 (487)
Q Consensus 426 ~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 484 (487)
-+.++++++|.++++| +..+++..+-+..... +.-+.+..++++.+.+++..+
T Consensus 335 ~d~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 335 GDTTGVADQAIQLLKD---EELHRNMGERARESVY---EQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp TCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH---HHSCHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHHh
Confidence 3789999999999998 4433332222222110 234566677777777776653
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.19 E-value=3.8e-10 Score=111.53 Aligned_cols=85 Identities=18% Similarity=0.174 Sum_probs=64.9
Q ss_pred CCeeecccCCc---cccccccccccccccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcC
Q 011396 351 VGLVVPSWSPQ---VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVG 427 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 427 (487)
++|.+.+++++ ..+++.++ +||+.+| |.+.||+++|+|+|+.+...++.. +.+ .|.|+.++ .+
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~-~g~g~lv~------~d 320 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLK-AGILKLAG------TD 320 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHH-HTSEEECC------SC
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhc-CCceEECC------CC
Confidence 47888866554 58898999 9999884 556699999999999876666655 345 58887774 38
Q ss_pred HHHHHHHHHHhccCchhHHHHHHHH
Q 011396 428 REDIANYAKGLIQGEEGKLLRSKMR 452 (487)
Q Consensus 428 ~~~l~~~i~~ll~~~~~~~~r~~a~ 452 (487)
.++|.+++.++++| +..++++.
T Consensus 321 ~~~la~~i~~ll~d---~~~~~~~~ 342 (376)
T 1v4v_A 321 PEGVYRVVKGLLEN---PEELSRMR 342 (376)
T ss_dssp HHHHHHHHHHHHTC---HHHHHHHH
T ss_pred HHHHHHHHHHHHhC---hHhhhhhc
Confidence 89999999999998 55554443
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.17 E-value=6.1e-11 Score=117.54 Aligned_cols=83 Identities=13% Similarity=0.091 Sum_probs=63.3
Q ss_pred CCeeecccCCc---cccccccccccccccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcC
Q 011396 351 VGLVVPSWSPQ---VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVG 427 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 427 (487)
++|.+.+++++ ..+++.++ +||+.+| |++.||+++|+|+|+.+...+. ..+.+ .|.|+.++ .+
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~----~e~v~-~g~g~lv~------~d 328 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTER----PEAVT-AGTVRLVG------TD 328 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSC----HHHHH-HTSEEEEC------SS
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCc----chhhh-CCceEEeC------CC
Confidence 57888666654 67788899 8999885 4588999999999999874433 33455 68888875 27
Q ss_pred HHHHHHHHHHhccCchhHHHHHH
Q 011396 428 REDIANYAKGLIQGEEGKLLRSK 450 (487)
Q Consensus 428 ~~~l~~~i~~ll~~~~~~~~r~~ 450 (487)
.++|.++|.++++| +..+++
T Consensus 329 ~~~la~~i~~ll~d---~~~~~~ 348 (384)
T 1vgv_A 329 KQRIVEEVTRLLKD---ENEYQA 348 (384)
T ss_dssp HHHHHHHHHHHHHC---HHHHHH
T ss_pred HHHHHHHHHHHHhC---hHHHhh
Confidence 89999999999998 554443
No 32
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.17 E-value=6.7e-09 Score=106.72 Aligned_cols=115 Identities=13% Similarity=-0.031 Sum_probs=74.1
Q ss_pred CCeeecccCCc---ccccccc----ccccccc----cccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEee
Q 011396 351 VGLVVPSWSPQ---VQVLRHG----STGGFLS----HCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVK 419 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~----~~~~~I~----HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 419 (487)
++|.+.+++|+ ..+++.+ + ++|. -|-..++.||+++|+|+|+... ......+.+ -+.|+.++
T Consensus 335 ~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~-~~~g~l~~ 407 (499)
T 2r60_A 335 GKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDG-GKYGVLVD 407 (499)
T ss_dssp TTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGG-GTSSEEEC
T ss_pred ceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcC-CceEEEeC
Confidence 57889999975 4567778 7 6662 2445689999999999998764 334445555 45788776
Q ss_pred ecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 011396 420 VNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNLE 483 (487)
Q Consensus 420 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 483 (487)
. -+.++++++|.++++| +..+++..+-+..... +.-+.+..++++.+-+++..
T Consensus 408 ~-----~d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~---~~fs~~~~~~~~~~~y~~~~ 460 (499)
T 2r60_A 408 P-----EDPEDIARGLLKAFES---EETWSAYQEKGKQRVE---ERYTWQETARGYLEVIQEIA 460 (499)
T ss_dssp T-----TCHHHHHHHHHHHHSC---HHHHHHHHHHHHHHHH---HHSBHHHHHHHHHHHHHHHH
T ss_pred C-----CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHH
Confidence 4 3789999999999998 4433332222221111 12345555666655555543
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.15 E-value=9.2e-09 Score=102.39 Aligned_cols=115 Identities=16% Similarity=0.142 Sum_probs=78.6
Q ss_pred CCCeeecccCCc---cccccccccccccc----ccc-chhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeec
Q 011396 350 GVGLVVPSWSPQ---VQVLRHGSTGGFLS----HCG-WNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVN 421 (487)
Q Consensus 350 ~~~v~~~~~~pq---~~~L~~~~~~~~I~----HGG-~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 421 (487)
.++|.+.+++|+ ..++..++ ++|. +.| ..++.||+++|+|+|+.+. ......+.+ -+.|+.++.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSAD--VYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLAD-GDAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSS--EEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTT-TTSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCC--EEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcC-CCceEEeCC-
Confidence 357889999987 57888888 5553 334 4489999999999999765 445556666 567877754
Q ss_pred CCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 011396 422 ENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNLE 483 (487)
Q Consensus 422 ~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 483 (487)
-+.+++.++|.++++| +..++++.+ ..++... .-+.+..++++.+.+++..
T Consensus 334 ----~d~~~l~~~i~~l~~~---~~~~~~~~~---~~~~~~~-~~s~~~~~~~~~~~~~~~~ 384 (406)
T 2gek_A 334 ----DDADGMAAALIGILED---DQLRAGYVA---RASERVH-RYDWSVVSAQIMRVYETVS 384 (406)
T ss_dssp ----TCHHHHHHHHHHHHHC---HHHHHHHHH---HHHHHGG-GGBHHHHHHHHHHHHHHHC
T ss_pred ----CCHHHHHHHHHHHHcC---HHHHHHHHH---HHHHHHH-hCCHHHHHHHHHHHHHHHH
Confidence 3789999999999998 544433322 2222222 3455666677766666654
No 34
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.13 E-value=3.6e-08 Score=98.99 Aligned_cols=112 Identities=13% Similarity=-0.013 Sum_probs=77.0
Q ss_pred CCeeecccCCcc---cccccccccccc----ccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCC
Q 011396 351 VGLVVPSWSPQV---QVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNEN 423 (487)
Q Consensus 351 ~~v~~~~~~pq~---~~L~~~~~~~~I----~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 423 (487)
..+.+.+|+|+. .++..++ ++| .-|-..++.||+++|+|+|+... ......+.. |.|..++.
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~--- 379 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKA--- 379 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEECT---
T ss_pred CEEEEcCCCCHHHHHHHHHHCC--EEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC---
Confidence 456678889874 5678888 555 23445799999999999998654 333444444 68888765
Q ss_pred CCcCHHHHHHHHHHhcc-Cch-hHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 011396 424 GLVGREDIANYAKGLIQ-GEE-GKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNLE 483 (487)
Q Consensus 424 ~~~~~~~l~~~i~~ll~-~~~-~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 483 (487)
-+.++++++|.++++ |++ ...+.+++++..+ .-+.+..++++.+-+++..
T Consensus 380 --~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 380 --GDPGELANAILKALELSRSDLSKFRENCKKRAM--------SFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp --TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH--------TSCHHHHHHHHHHHHHTCS
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh--------hCcHHHHHHHHHHHHHHHH
Confidence 378999999999998 633 3445554444431 2466677777777777664
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.04 E-value=1.8e-09 Score=106.47 Aligned_cols=83 Identities=18% Similarity=0.073 Sum_probs=62.0
Q ss_pred CCeeecccCCc---cccccccccccccccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcC
Q 011396 351 VGLVVPSWSPQ---VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVG 427 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 427 (487)
++|.+.+++++ ..+++.++ ++|+..| |.+.||+++|+|+|+....... ..+.+ .|.|+.++ .+
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~-~g~g~~v~------~d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIE-AGTLKLAG------TD 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHH-TTSEEECC------SC
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeec-CCceEEcC------CC
Confidence 57888777765 57788888 8998874 5688999999999988543332 23455 57888774 37
Q ss_pred HHHHHHHHHHhccCchhHHHHHH
Q 011396 428 REDIANYAKGLIQGEEGKLLRSK 450 (487)
Q Consensus 428 ~~~l~~~i~~ll~~~~~~~~r~~ 450 (487)
.++++++|.++++| +..+++
T Consensus 329 ~~~la~~i~~ll~~---~~~~~~ 348 (375)
T 3beo_A 329 EETIFSLADELLSD---KEAHDK 348 (375)
T ss_dssp HHHHHHHHHHHHHC---HHHHHH
T ss_pred HHHHHHHHHHHHhC---hHhHhh
Confidence 89999999999998 555443
No 36
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.00 E-value=8.1e-10 Score=109.31 Aligned_cols=320 Identities=11% Similarity=0.056 Sum_probs=165.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhc-CCCCceEEeCCCCCCCCCCCch
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLES-LPTSISTIFLPPVSFDDLPDDV 89 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 89 (487)
+++|++++ |++-...-+.+|.++|.++ +++.++.|.. .++..... +-.++ .++.++. .+..+.
T Consensus 9 ~~~~~~v~-GtRpe~~k~~p~~~~l~~~--~~~~~~~tgq---------h~~~~~~~~~~~~~---~i~~~~~-~l~~~~ 72 (385)
T 4hwg_A 9 MLKVMTIV-GTRPELIKLCCVISEFDKH--TKHILVHTGQ---------NYAYELNQVFFDDM---GIRKPDY-FLEVAA 72 (385)
T ss_dssp CCEEEEEE-CSHHHHHHHHHHHHHHHHH--SEEEEEECSC---------HHHHHHTHHHHC-C---CCCCCSE-ECCCCC
T ss_pred hhheeEEE-EcCHhHHHHHHHHHHHHhc--CCEEEEEeCC---------CCChhHHHHHHhhC---CCCCCce-ecCCCC
Confidence 56676665 8888888888899999654 8888888875 22211110 00111 1211110 111110
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEe--CCCcchHHHHHHHhCCCeEEEecchHHHHHHHhhccccccccc
Q 011396 90 RMETRITLTLARSLSSLRDALKVLAESTRLVALVV--DIFGSAAFDVANEFGVPVYIFFTTTAMVLSLIFHLPELDVKFS 167 (487)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~--D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 167 (487)
. .+.......+..+.+.+++. +||+||. |..+.+++.+|..+|||++.+..
T Consensus 73 ~---~~~~~~~~~~~~l~~~l~~~----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea-------------------- 125 (385)
T 4hwg_A 73 D---NTAKSIGLVIEKVDEVLEKE----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA-------------------- 125 (385)
T ss_dssp C---CSHHHHHHHHHHHHHHHHHH----CCSEEEEESCSGGGGGHHHHHHTTCCEEEESC--------------------
T ss_pred C---CHHHHHHHHHHHHHHHHHhc----CCcEEEEECCchHHHHHHHHHHhCCCEEEEeC--------------------
Confidence 0 11233334455666667665 9998874 44444557899999999665321
Q ss_pred cCCCCCCCcccCCCCCccCcCCCCCCccccchHHHHHHHHHHhhhhcccEEEEcchhhhchHHHHHHhcCCCCCCCCCee
Q 011396 168 CEYRDVPEPVQLPGCVPINGRDFADPFQQRKNEAYRIFLSFSKQYLVAAGIMVNSFMDLETGAFKALMEGDSSFKPPPVY 247 (487)
Q Consensus 168 ~~~~~~~~~~~~pg~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~~~ 247 (487)
|+.... ..+| + ...+.+.. ..++..+.++-... .. ..+... ...++.
T Consensus 126 -------------glrs~~-~~~p----e---e~nR~~~~-----~~a~~~~~~te~~~-~~---l~~~G~---~~~~I~ 172 (385)
T 4hwg_A 126 -------------GNRCFD-QRVP----E---EINRKIID-----HISDVNITLTEHAR-RY---LIAEGL---PAELTF 172 (385)
T ss_dssp -------------CCCCSC-TTST----H---HHHHHHHH-----HHCSEEEESSHHHH-HH---HHHTTC---CGGGEE
T ss_pred -------------CCcccc-ccCc----H---HHHHHHHH-----hhhceeecCCHHHH-HH---HHHcCC---CcCcEE
Confidence 110000 0001 0 00111111 12334444442211 11 112211 112688
Q ss_pred ecccCcCCCCCCCCCCccccccccccccCCCCcEEEEEecCCCCCC-HHHHHHHHHHHHhc----CCceEEEEeCCcccc
Q 011396 248 PVGPLVQTGSTNETNNDRRHECLKWLDEQPSESVLFVCFGSGGTLS-PEQLNELALGLEMS----GQRFLWVVRSPHERA 322 (487)
Q Consensus 248 ~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~ 322 (487)
.+|-...+............++.+-+.-. +++.+++++|...... .+.+..+++++... +..+++.......
T Consensus 173 vtGnp~~D~~~~~~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~-- 249 (385)
T 4hwg_A 173 KSGSHMPEVLDRFMPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTK-- 249 (385)
T ss_dssp ECCCSHHHHHHHHHHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHH--
T ss_pred EECCchHHHHHHhhhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHH--
Confidence 89943222100000000112222233322 2458888888754333 24466677776543 5667766543211
Q ss_pred ccccccccCCCCCCCCCCchhHHHh---h-cCCCeeecccCC---ccccccccccccccccccchhHHHHHhhCCceecc
Q 011396 323 ANATYFGIQSMKDPFDFLPKGFLDR---T-KGVGLVVPSWSP---QVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAW 395 (487)
Q Consensus 323 ~~~~~~~~~~~~~~~~~l~~~~~~~---~-~~~~v~~~~~~p---q~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~ 395 (487)
+.+... . ..+++.+.+..+ ...+++.++ ++|+-.|. .+.||.+.|+|+|++
T Consensus 250 -------------------~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~ 307 (385)
T 4hwg_A 250 -------------------KRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPALNI 307 (385)
T ss_dssp -------------------HHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCEEEC
T ss_pred -------------------HHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCEEEc
Confidence 111110 1 123676655554 357888899 99999886 469999999999999
Q ss_pred ccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCc
Q 011396 396 PLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGE 442 (487)
Q Consensus 396 P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 442 (487)
+...+.+. ..+ .|.++.+. .++++|.+++.++++|+
T Consensus 308 ~~~ter~e----~v~-~G~~~lv~------~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 308 REAHERPE----GMD-AGTLIMSG------FKAERVLQAVKTITEEH 343 (385)
T ss_dssp SSSCSCTH----HHH-HTCCEECC------SSHHHHHHHHHHHHTTC
T ss_pred CCCccchh----hhh-cCceEEcC------CCHHHHHHHHHHHHhCh
Confidence 87554333 245 58776663 47899999999999884
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.96 E-value=5.7e-07 Score=88.19 Aligned_cols=135 Identities=15% Similarity=0.146 Sum_probs=89.4
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHHhcCC----c-eEEEEeCCccccccccccccCCCCCCCCCCchhHHHh---hc-C
Q 011396 280 SVLFVCFGSGGTLSPEQLNELALGLEMSGQ----R-FLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDR---TK-G 350 (487)
Q Consensus 280 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~-~ 350 (487)
..+++..|+... .+....++++++.... . -++.+|.... +.+... .. .
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---------------------~~~~~~~~~~~~~ 252 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP---------------------RKFEALAEKLGVR 252 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---------------------HHHHHHHHHHTCG
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---------------------HHHHHHHHHcCCC
Confidence 467777787533 2445666777766532 2 2344443211 222221 11 3
Q ss_pred CCeeecccCCc-cccccccccccccc----cccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCC
Q 011396 351 VGLVVPSWSPQ-VQVLRHGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGL 425 (487)
Q Consensus 351 ~~v~~~~~~pq-~~~L~~~~~~~~I~----HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 425 (487)
++|.+.++..+ ..++..++ ++|. .|..+++.||+++|+|+|+... ..+...+++ -+.|+.++..
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~~~---- 321 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIAD-ANCGTVIAEP---- 321 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHH-HTCEEEECSS----
T ss_pred CcEEECCCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhcc-CCceEEeCCC----
Confidence 57888887655 67888888 6665 5778899999999999999765 345667777 7889888632
Q ss_pred cCHHHHHHHHHHhccCchhHHHHHHH
Q 011396 426 VGREDIANYAKGLIQGEEGKLLRSKM 451 (487)
Q Consensus 426 ~~~~~l~~~i~~ll~~~~~~~~r~~a 451 (487)
-+.+++.++|.++++| +..++++
T Consensus 322 ~~~~~l~~~i~~l~~~---~~~~~~~ 344 (374)
T 2iw1_A 322 FSQEQLNEVLRKALTQ---SPLRMAW 344 (374)
T ss_dssp CCHHHHHHHHHHHHHC---HHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---hHHHHHH
Confidence 3899999999999998 4444433
No 38
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.94 E-value=4.5e-08 Score=95.16 Aligned_cols=125 Identities=15% Similarity=0.117 Sum_probs=77.6
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCc
Q 011396 282 LFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQ 361 (487)
Q Consensus 282 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq 361 (487)
+++..|+.. ..+....++++++..+.++++ +|.... ...-+.+..+.. ++|.+.+|+|+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~~-----------------~~~l~~~~~~~~-~~v~~~g~~~~ 222 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAWE-----------------PEYFDEITRRYG-STVEPIGEVGG 222 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCCC-----------------HHHHHHHHHHHT-TTEEECCCCCH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCccc-----------------HHHHHHHHHHhC-CCEEEeccCCH
Confidence 445567753 335566777888777666544 443211 000012222223 68999999997
Q ss_pred c---cccccccccccc--c------------cccchhHHHHHhhCCceeccccccccchhhHhhhhhc--cceEEeeecC
Q 011396 362 V---QVLRHGSTGGFL--S------------HCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDL--KVSFRVKVNE 422 (487)
Q Consensus 362 ~---~~L~~~~~~~~I--~------------HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~--G~G~~l~~~~ 422 (487)
. .++..++ ++| + -|-..++.||+++|+|+|+.... .+...+.+ . +.|+.++
T Consensus 223 ~~l~~~~~~ad--v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~-~~~~~g~~~~--- 292 (342)
T 2iuy_A 223 ERRLDLLASAH--AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPS-VGEVVGYGTD--- 292 (342)
T ss_dssp HHHHHHHHHCS--EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGG-GEEECCSSSC---
T ss_pred HHHHHHHHhCC--EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcc-cCCCceEEcC---
Confidence 4 7888888 555 2 24456899999999999998753 23333332 1 3455443
Q ss_pred CCCcCHHHHHHHHHHhcc
Q 011396 423 NGLVGREDIANYAKGLIQ 440 (487)
Q Consensus 423 ~~~~~~~~l~~~i~~ll~ 440 (487)
.+.+++.++|.++++
T Consensus 293 ---~d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 ---FAPDEARRTLAGLPA 307 (342)
T ss_dssp ---CCHHHHHHHHHTSCC
T ss_pred ---CCHHHHHHHHHHHHH
Confidence 268999999999986
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.75 E-value=1.7e-06 Score=86.32 Aligned_cols=112 Identities=14% Similarity=0.089 Sum_probs=74.1
Q ss_pred CCCeeecccCC---c---ccccccccccccccc----ccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEee
Q 011396 350 GVGLVVPSWSP---Q---VQVLRHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVK 419 (487)
Q Consensus 350 ~~~v~~~~~~p---q---~~~L~~~~~~~~I~H----GG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 419 (487)
.++|.+.+|++ + ..+++.++ ++|.- |...++.||+++|+|+|+.+. ..+...+.+ -+.|+.++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEEC
Confidence 35788888775 2 45777788 66643 356789999999999999764 345555666 56788774
Q ss_pred ecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHH-HHhhcCCCCChHHHHHHHHHHHHhh
Q 011396 420 VNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDA-AANALSPDGSSTKSLAQVAQKWKNL 482 (487)
Q Consensus 420 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 482 (487)
+.++++++|.++++| +..++++.+-+.. ++ +.-+.+..++++.+-+++.
T Consensus 365 -------d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~----~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKH---PEVSKEMGAKAKERVR----KNFIITKHMERYLDILNSL 414 (416)
T ss_dssp -------SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HHTBHHHHHHHHHHHHHTC
T ss_pred -------CHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHH----HHcCHHHHHHHHHHHHHHh
Confidence 578999999999998 4444333322222 22 1235556666666666554
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.46 E-value=8.7e-06 Score=87.36 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=53.8
Q ss_pred CCeeecccCC----cccccc----cccccccc----ccccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEe
Q 011396 351 VGLVVPSWSP----QVQVLR----HGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRV 418 (487)
Q Consensus 351 ~~v~~~~~~p----q~~~L~----~~~~~~~I----~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l 418 (487)
++|.+.++.+ +.++.. .++ ++| .-|-..++.||+++|+|+|+. |-......+.+ -+.|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~d-g~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVH-GKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCB-TTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHcc-CCcEEEe
Confidence 4677777443 344433 345 555 234567999999999999986 44445555666 5678888
Q ss_pred eecCCCCcCHHHHHHHHHHhc----cCc
Q 011396 419 KVNENGLVGREDIANYAKGLI----QGE 442 (487)
Q Consensus 419 ~~~~~~~~~~~~l~~~i~~ll----~~~ 442 (487)
+.. +.++++++|.+++ .|+
T Consensus 713 ~p~-----D~e~LA~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 713 DPY-----HGDQAADTLADFFTKCKEDP 735 (816)
T ss_dssp CTT-----SHHHHHHHHHHHHHHHHHCT
T ss_pred CCC-----CHHHHHHHHHHHHHHhccCH
Confidence 653 7889999997766 673
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.46 E-value=3e-05 Score=78.97 Aligned_cols=113 Identities=10% Similarity=-0.082 Sum_probs=74.5
Q ss_pred CCee-ecccCCc--ccccccccccccc----ccccchhHHHHHhhCCceeccccccccchhhHhhhhhc---------cc
Q 011396 351 VGLV-VPSWSPQ--VQVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDL---------KV 414 (487)
Q Consensus 351 ~~v~-~~~~~pq--~~~L~~~~~~~~I----~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~ 414 (487)
.++. +.++..+ ..+++.++ ++| .-|...++.||+++|+|+|+.... .+...+.+ - +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGAD--VILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSD-CSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCC--EEEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccceecc-Cccccccccccc
Confidence 5675 6677333 36788888 666 235567899999999999987642 34444444 3 57
Q ss_pred eEEeeecCCCCcCHHHHHHHHHHhc---cCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhhh
Q 011396 415 SFRVKVNENGLVGREDIANYAKGLI---QGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNLES 484 (487)
Q Consensus 415 G~~l~~~~~~~~~~~~l~~~i~~ll---~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 484 (487)
|+.++. -+.++++++|.+++ .| +..++++. +..++ +.-+.+..++++.+-+++...
T Consensus 420 G~l~~~-----~d~~~la~~i~~ll~~~~~---~~~~~~~~---~~~~~---~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 420 GFVFED-----SNAWSLLRAIRRAFVLWSR---PSLWRFVQ---RQAMA---MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp BEEECS-----SSHHHHHHHHHHHHHHHTS---HHHHHHHH---HHHHH---CCCCHHHHHHHHHHHHHHHC-
T ss_pred eEEECC-----CCHHHHHHHHHHHHHHcCC---HHHHHHHH---HHHHh---hcCCHHHHHHHHHHHHHHhhh
Confidence 877764 37899999999999 67 55444333 22222 456667777777777766653
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.44 E-value=2.4e-05 Score=79.68 Aligned_cols=113 Identities=13% Similarity=0.011 Sum_probs=74.9
Q ss_pred CCee-ecccCCc--ccccccccccccc----ccccchhHHHHHhhCCceeccccccccchhhHhhhhhc---------cc
Q 011396 351 VGLV-VPSWSPQ--VQVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDL---------KV 414 (487)
Q Consensus 351 ~~v~-~~~~~pq--~~~L~~~~~~~~I----~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~ 414 (487)
.+|. +.++..+ ..+++.++ ++| .-|-..++.||+++|+|+|+.... .....+.+ - +.
T Consensus 346 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~ 418 (485)
T 1rzu_A 346 GRVGVAIGYNEPLSHLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVID-ANHAALASKAAT 418 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCC
T ss_pred CcEEEecCCCHHHHHHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhheecc-cccccccccCCc
Confidence 5676 5677333 36788888 666 235567999999999999997652 33444444 3 57
Q ss_pred eEEeeecCCCCcCHHHHHHHHHHhc---cCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhhh
Q 011396 415 SFRVKVNENGLVGREDIANYAKGLI---QGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNLES 484 (487)
Q Consensus 415 G~~l~~~~~~~~~~~~l~~~i~~ll---~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 484 (487)
|+.++. -+.++++++|.+++ .| +..++++ ++..++ +.-+.+..++++.+-+++..+
T Consensus 419 G~l~~~-----~d~~~la~~i~~ll~~~~~---~~~~~~~---~~~~~~---~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 419 GVQFSP-----VTLDGLKQAIRRTVRYYHD---PKLWTQM---QKLGMK---SDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp BEEESS-----CSHHHHHHHHHHHHHHHTC---HHHHHHH---HHHHHT---CCCBHHHHHHHHHHHHHHHTC
T ss_pred ceEeCC-----CCHHHHHHHHHHHHHHhCC---HHHHHHH---HHHHHH---HhCChHHHHHHHHHHHHHhhC
Confidence 877754 37899999999999 67 5444433 222232 456666777777777666543
No 43
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.34 E-value=8.1e-05 Score=73.13 Aligned_cols=97 Identities=15% Similarity=0.176 Sum_probs=69.5
Q ss_pred CeeecccCCc-cccccccccccccc---c--ccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCC
Q 011396 352 GLVVPSWSPQ-VQVLRHGSTGGFLS---H--CGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGL 425 (487)
Q Consensus 352 ~v~~~~~~pq-~~~L~~~~~~~~I~---H--GG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 425 (487)
++.+.++..+ ..+++.++ +++. . +|..++.||+++|+|+|+-|...+.......+.+ .|.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aD--v~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGK--IAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEE--EEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCC--EEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEe-------
Confidence 3555555444 67888888 6443 2 3457899999999999986766666665555555 5776665
Q ss_pred cCHHHHHHHHHHhccCch-hHHHHHHHHHHHHHHH
Q 011396 426 VGREDIANYAKGLIQGEE-GKLLRSKMRALKDAAA 459 (487)
Q Consensus 426 ~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~ 459 (487)
-+.+++++++.++++| + -..+.+++++..+.-.
T Consensus 331 ~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 331 KNETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 2678999999999987 5 4678888887776654
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.29 E-value=8.8e-05 Score=73.64 Aligned_cols=111 Identities=7% Similarity=0.005 Sum_probs=72.2
Q ss_pred eeecccCCc---ccccccccccccc----ccccchhHHHHHhhCCceeccccccccchhhHhhhhhccc-----------
Q 011396 353 LVVPSWSPQ---VQVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKV----------- 414 (487)
Q Consensus 353 v~~~~~~pq---~~~L~~~~~~~~I----~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~----------- 414 (487)
+.+.+|+|+ ..++..++ ++| .-|...++.||+++|+|+|+.... .....+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACD--VIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCC--EEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHcc--Ccccccccccccc
Confidence 666789984 55677788 665 334566999999999999986643 22223322 22
Q ss_pred -----eE--EeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 011396 415 -----SF--RVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNLE 483 (487)
Q Consensus 415 -----G~--~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 483 (487)
|+ .+.. -+.++++++| ++++| +..++++.+-+.+. ..+.-+.+..++++.+-+++..
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~---~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~~~~~~ 391 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKD---EKNRKEYGKRVQDF---VKTKPTWDDISSDIIDFFNSLL 391 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTS---HHHHHHHHHHHHHH---HTTSCCHHHHHHHHHHHHHHHT
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcC---HHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHHH
Confidence 44 4443 3899999999 99998 55554433333332 2245577777777777777654
No 45
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.29 E-value=0.00037 Score=72.36 Aligned_cols=120 Identities=15% Similarity=0.062 Sum_probs=75.7
Q ss_pred CCeeecccCCc---ccccccccccccc---ccccchhHHHHHhhCCceeccccccccch-hhHhhhhhccceEEeeecCC
Q 011396 351 VGLVVPSWSPQ---VQVLRHGSTGGFL---SHCGWNSILESIVHGVPIIAWPLYAEQKM-NAVLLIDDLKVSFRVKVNEN 423 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~~~~~~I---~HGG~gt~~eal~~GvP~l~~P~~~DQ~~-na~~v~~~~G~G~~l~~~~~ 423 (487)
++|.+.+++|+ ..++..+| +|| ..|+..++.||+++|+|+|++|-..=... -+..+.. .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 57888999984 46688888 665 23777899999999999999763211111 1234444 56655442
Q ss_pred CCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 011396 424 GLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNLE 483 (487)
Q Consensus 424 ~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 483 (487)
-+.+++.+++.++++| +..++++.+-+..... ..+.-+....++++.+-+++..
T Consensus 507 --~~~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~y~~~~ 560 (568)
T 2vsy_A 507 --ADDAAFVAKAVALASD---PAALTALHARVDVLRR-ASGVFHMDGFADDFGALLQALA 560 (568)
T ss_dssp --SSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH-HSSTTCHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHhcC---HHHHHHHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHH
Confidence 2789999999999998 5555443332222210 0245566666666666665544
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.15 E-value=9.8e-06 Score=70.55 Aligned_cols=130 Identities=12% Similarity=0.054 Sum_probs=84.7
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhcC-CceEEEEeCCccccccccccccCCCCCCCCCCchhHH--HhhcCCCeeecc
Q 011396 281 VLFVCFGSGGTLSPEQLNELALGLEMSG-QRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFL--DRTKGVGLVVPS 357 (487)
Q Consensus 281 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~v~~~~ 357 (487)
.+++..|+.. ..+.+..++++++... .+++ .++.... ...+-+-.. ..-..++|.+.+
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~-i~G~~~~----------------~~~l~~~~~~~~~~l~~~v~~~g 84 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLY-IVGWFSK----------------GDHAERYARKIMKIAPDNVKFLG 84 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEE-EEBCCCT----------------TSTHHHHHHHHHHHSCTTEEEEE
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEE-EEecCcc----------------HHHHHHHHHhhhcccCCcEEEeC
Confidence 4555667753 2345677788887763 4444 3443221 011111111 111235899999
Q ss_pred cCCc---cccccccccccccc---c-ccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHH
Q 011396 358 WSPQ---VQVLRHGSTGGFLS---H-CGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGRED 430 (487)
Q Consensus 358 ~~pq---~~~L~~~~~~~~I~---H-GG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~ 430 (487)
|+|+ ..++..++ ++|. + |...++.||+++|+|+|+... ..+...+.+ -+.|+.+ . -+.++
T Consensus 85 ~~~~~e~~~~~~~ad--i~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~--~----~d~~~ 151 (177)
T 2f9f_A 85 SVSEEELIDLYSRCK--GLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV--N----ADVNE 151 (177)
T ss_dssp SCCHHHHHHHHHHCS--EEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE--C----SCHHH
T ss_pred CCCHHHHHHHHHhCC--EEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe--C----CCHHH
Confidence 9997 67888888 6665 2 444599999999999998754 455556666 5688877 2 48999
Q ss_pred HHHHHHHhccCc
Q 011396 431 IANYAKGLIQGE 442 (487)
Q Consensus 431 l~~~i~~ll~~~ 442 (487)
+.++|.++++|+
T Consensus 152 l~~~i~~l~~~~ 163 (177)
T 2f9f_A 152 IIDAMKKVSKNP 163 (177)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHHhCH
Confidence 999999999884
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.01 E-value=0.00074 Score=66.99 Aligned_cols=74 Identities=8% Similarity=-0.001 Sum_probs=56.1
Q ss_pred CCeeecccCCc---cccccccccccccc----cccchhHHHHH-------hhCCceeccccccccchhhHhhhhhccceE
Q 011396 351 VGLVVPSWSPQ---VQVLRHGSTGGFLS----HCGWNSILESI-------VHGVPIIAWPLYAEQKMNAVLLIDDLKVSF 416 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~~~~~~I~----HGG~gt~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 416 (487)
++|.+.+++|+ ..+++.++ ++|. -|-.+++.||+ ++|+|+|+... +.. -..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~ad--v~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHAR--FGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcC--EEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-CcceE
Confidence 47889999986 45677888 5542 24456789999 99999999765 555 45677
Q ss_pred E-eeecCCCCcCHHHHHHHHHHhccCc
Q 011396 417 R-VKVNENGLVGREDIANYAKGLIQGE 442 (487)
Q Consensus 417 ~-l~~~~~~~~~~~~l~~~i~~ll~~~ 442 (487)
. ++. -+.++++++|.++++|+
T Consensus 332 l~v~~-----~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 332 FGYTP-----GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEECT-----TCHHHHHHHHHHHHHCC
T ss_pred EEeCC-----CCHHHHHHHHHHHHhCc
Confidence 6 654 37899999999999884
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.49 E-value=0.00064 Score=57.88 Aligned_cols=140 Identities=11% Similarity=0.139 Sum_probs=79.6
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHHhcCC--ceEE-EEeCCccccccccccccCCCCCCCCCCchhHHHhhc--CCCee
Q 011396 280 SVLFVCFGSGGTLSPEQLNELALGLEMSGQ--RFLW-VVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTK--GVGLV 354 (487)
Q Consensus 280 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~ 354 (487)
+++++..|+... .+....++++++.... .+-+ .+|.... .+.+....+ ..++.
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~--------------------~~~~~~~~~~~~~~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPD--------------------EKKIKLLAQKLGVKAE 59 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTT--------------------HHHHHHHHHHHTCEEE
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCcc--------------------HHHHHHHHHHcCCeEE
Confidence 467777888633 3446666777766532 3333 3333211 122222221 12677
Q ss_pred ecccCCc---cccccccccccccc----cccchhHHHHHhhCC-ceeccccccccchhhHhhhhhccceEEeeecCCCCc
Q 011396 355 VPSWSPQ---VQVLRHGSTGGFLS----HCGWNSILESIVHGV-PIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLV 426 (487)
Q Consensus 355 ~~~~~pq---~~~L~~~~~~~~I~----HGG~gt~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 426 (487)
+ +|+|+ ..++..++ ++|. -|...++.||+++|+ |+|+.... ......+.+ -+. .+.. -
T Consensus 60 ~-g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~-~~~--~~~~-----~ 125 (166)
T 3qhp_A 60 F-GFVNSNELLEILKTCT--LYVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALD-ERS--LFEP-----N 125 (166)
T ss_dssp C-CCCCHHHHHHHHTTCS--EEEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSS-GGG--EECT-----T
T ss_pred E-eecCHHHHHHHHHhCC--EEEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccC-Cce--EEcC-----C
Confidence 7 99886 46787888 6664 355679999999997 99983321 112222233 233 2222 4
Q ss_pred CHHHHHHHHHHhccCch-hHHHHHHHHHHH
Q 011396 427 GREDIANYAKGLIQGEE-GKLLRSKMRALK 455 (487)
Q Consensus 427 ~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~ 455 (487)
+.+++.++|.++++|++ -..+.+++++..
T Consensus 126 ~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 126 NAKDLSAKIDWWLENKLERERMQNEYAKSA 155 (166)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 89999999999999843 233444444433
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.39 E-value=0.0019 Score=56.69 Aligned_cols=78 Identities=13% Similarity=-0.020 Sum_probs=59.2
Q ss_pred Ceee-cccCCc---ccccccccccccccc----ccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCC
Q 011396 352 GLVV-PSWSPQ---VQVLRHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNEN 423 (487)
Q Consensus 352 ~v~~-~~~~pq---~~~L~~~~~~~~I~H----GG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 423 (487)
+|.+ .+++++ ..++..++ ++|.- |...++.||+++|+|+|+.... .+...+ . -+.|+.++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad--~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~-~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-T-NETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-C-TTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCC--EEEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-C-CCceEEecC---
Confidence 7888 999984 57788888 66632 3357899999999999887543 344455 5 577887754
Q ss_pred CCcCHHHHHHHHHHhcc-Cc
Q 011396 424 GLVGREDIANYAKGLIQ-GE 442 (487)
Q Consensus 424 ~~~~~~~l~~~i~~ll~-~~ 442 (487)
-+.+++.++|.++++ |+
T Consensus 165 --~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 165 --GDPGELANAILKALELSR 182 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCH
T ss_pred --CCHHHHHHHHHHHHhcCH
Confidence 378999999999998 83
No 50
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.16 E-value=0.15 Score=52.21 Aligned_cols=83 Identities=11% Similarity=-0.037 Sum_probs=49.7
Q ss_pred CCeeecccCCc---cccccccccccccc----cccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecC-
Q 011396 351 VGLVVPSWSPQ---VQVLRHGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNE- 422 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~~~~~~I~----HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~- 422 (487)
.++.+....++ ..+++.++ +||. -|=..+++||+++|+|+|+....+ ....|.+ -.-|.......
T Consensus 382 ~~v~~~~~~~~~~~~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V~d-g~~G~~~~~~~~ 454 (536)
T 3vue_A 382 GKVRAVVKFNAPLAHLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTVIE-GKTGFHMGRLSV 454 (536)
T ss_dssp TTEEEECSCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHCCB-TTTEEECCCCCS
T ss_pred CceEEEEeccHHHHHHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCCCC----chheeeC-CCCccccccCCC
Confidence 45666566554 34677777 6653 233458999999999999876532 3333444 33444332211
Q ss_pred CC-C---cCHHHHHHHHHHhcc
Q 011396 423 NG-L---VGREDIANYAKGLIQ 440 (487)
Q Consensus 423 ~~-~---~~~~~l~~~i~~ll~ 440 (487)
++ . .+.+.|.++|++++.
T Consensus 455 ~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 455 DCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEECCCCHHHHHHHHHHHHH
Confidence 01 0 256889999988775
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.84 E-value=0.021 Score=60.82 Aligned_cols=134 Identities=16% Similarity=0.213 Sum_probs=90.6
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhh-----cCCC
Q 011396 278 SESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRT-----KGVG 352 (487)
Q Consensus 278 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~ 352 (487)
++.++|.||.+.....++.+..-.+-|++.+.-++|.+..+.. .-..+.... ..+.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-------------------~~~~l~~~~~~~gi~~~r 581 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-------------------GEPNIQQYAQNMGLPQNR 581 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-------------------GHHHHHHHHHHTTCCGGG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-------------------HHHHHHHHHHhcCCCcCe
Confidence 4569999999998899999999999999999999999876532 001222221 2234
Q ss_pred eeecccCCccc---cccccccccccc---cccchhHHHHHhhCCceeccccccccch---hhHhhhhhccceEEeeecCC
Q 011396 353 LVVPSWSPQVQ---VLRHGSTGGFLS---HCGWNSILESIVHGVPIIAWPLYAEQKM---NAVLLIDDLKVSFRVKVNEN 423 (487)
Q Consensus 353 v~~~~~~pq~~---~L~~~~~~~~I~---HGG~gt~~eal~~GvP~l~~P~~~DQ~~---na~~v~~~~G~G~~l~~~~~ 423 (487)
+++.+..|..+ .+..+| +++. .+|.+|+.|||..|||+|.++ +++.. -+..+.. +|+.-.+-
T Consensus 582 ~~f~~~~~~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~--g~~~~sR~~~s~l~~-~gl~e~ia---- 652 (723)
T 4gyw_A 582 IIFSPVAPKEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMP--GETLASRVAASQLTC-LGCLELIA---- 652 (723)
T ss_dssp EEEEECCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCC--CSSGGGTHHHHHHHH-HTCGGGBC----
T ss_pred EEECCCCCHHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEcc--CCCccHhHHHHHHHH-cCCccccc----
Confidence 66777777543 444455 7765 899999999999999999999 43322 2334555 66665443
Q ss_pred CCcCHHHHHHHHHHhccC
Q 011396 424 GLVGREDIANYAKGLIQG 441 (487)
Q Consensus 424 ~~~~~~~l~~~i~~ll~~ 441 (487)
-+.++-.+.-.++-+|
T Consensus 653 --~~~~~Y~~~a~~la~d 668 (723)
T 4gyw_A 653 --KNRQEYEDIAVKLGTD 668 (723)
T ss_dssp --SSHHHHHHHHHHHHHC
T ss_pred --CCHHHHHHHHHHHhcC
Confidence 2555555555556667
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.82 E-value=0.0076 Score=61.98 Aligned_cols=144 Identities=13% Similarity=0.070 Sum_probs=89.8
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEE--eCCccccccccccccCCCCCCCCCCchhHH-HhhcCCCeeec
Q 011396 280 SVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVV--RSPHERAANATYFGIQSMKDPFDFLPKGFL-DRTKGVGLVVP 356 (487)
Q Consensus 280 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~v~~~ 356 (487)
.++|.+|++.....++.+....+-+++.+..++|.. +.... ....+-..+. ..+. +.+++.
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g---------------~~~~~~~~~~~~GI~-~Rv~F~ 504 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG---------------ITHPYVERFIKSYLG-DSATAH 504 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG---------------GGHHHHHHHHHHHHG-GGEEEE
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch---------------hhHHHHHHHHHcCCC-ccEEEc
Confidence 589999999888889999888888888888888753 32111 0000101111 1111 356777
Q ss_pred ccCCccc---ccccccccccc---ccccchhHHHHHhhCCceecccccc-ccchhhHhhhhhccceEE-eeecCCCCcCH
Q 011396 357 SWSPQVQ---VLRHGSTGGFL---SHCGWNSILESIVHGVPIIAWPLYA-EQKMNAVLLIDDLKVSFR-VKVNENGLVGR 428 (487)
Q Consensus 357 ~~~pq~~---~L~~~~~~~~I---~HGG~gt~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~G~G~~-l~~~~~~~~~~ 428 (487)
+.+|..+ .+..+| +++ ..+|..|+.|||.+|||+|.++-.. --..-+..+.. .|+.-. +. -+.
T Consensus 505 g~~p~~e~la~y~~aD--IfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~ 575 (631)
T 3q3e_A 505 PHSPYHQYLRILHNCD--MMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTV 575 (631)
T ss_dssp CCCCHHHHHHHHHTCS--EEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSH
T ss_pred CCCCHHHHHHHHhcCc--EEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCH
Confidence 8888654 446666 544 3478899999999999999987321 11111223445 566542 32 367
Q ss_pred HHHHHHHHHhccCchhHHHHHHH
Q 011396 429 EDIANYAKGLIQGEEGKLLRSKM 451 (487)
Q Consensus 429 ~~l~~~i~~ll~~~~~~~~r~~a 451 (487)
++..+...++.+| +..+++.
T Consensus 576 eeYv~~Av~La~D---~~~l~~L 595 (631)
T 3q3e_A 576 DEYVERAVRLAEN---HQERLEL 595 (631)
T ss_dssp HHHHHHHHHHHHC---HHHHHHH
T ss_pred HHHHHHHHHHhCC---HHHHHHH
Confidence 8888888888888 4444433
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.65 E-value=0.088 Score=50.72 Aligned_cols=106 Identities=14% Similarity=0.110 Sum_probs=65.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCce-EEeCCCCCCCCCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQH-NFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSIS-TIFLPPVSFDDLPD 87 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~ 87 (487)
..++|+++-..+.|++.=.+++.+.|.++. +.+|++++.+. ...++...| .++ ++.++..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~----------~~~l~~~~p-~vd~vi~~~~~------- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEK----------LQQVMEYNP-NIDELIVVDKK------- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGG----------GGGGTSSCT-TCSEEEEECCS-------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcc----------hhHHHhcCC-CccEEEEeCcc-------
Confidence 357899999999999999999999997653 68999999886 223333333 343 3333321
Q ss_pred chhhHHHHHHHHHHhHHHHHHHHHHHhcCCCc-eEEEeCCCcchHHHHHHHhCCCeEE
Q 011396 88 DVRMETRITLTLARSLSSLRDALKVLAESTRL-VALVVDIFGSAAFDVANEFGVPVYI 144 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p-D~vI~D~~~~~~~~~A~~lgIP~v~ 144 (487)
... ..+.. .-.+...|+ ..++ |++|.-....-...++...|+|..+
T Consensus 69 ~~~--~~~~~-----~~~l~~~Lr----~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 GRH--NSISG-----LNEVAREIN----AKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp SHH--HHHHH-----HHHHHHHHH----HHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ccc--ccHHH-----HHHHHHHHh----hCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 110 01111 111222233 2389 9998655455566788888999765
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.61 E-value=0.0034 Score=60.40 Aligned_cols=96 Identities=17% Similarity=0.177 Sum_probs=72.4
Q ss_pred CeeecccCCcccc---ccccccccccccccc---------hhHHHHHhhCCceeccccccccchhhHhhhhhccceEEee
Q 011396 352 GLVVPSWSPQVQV---LRHGSTGGFLSHCGW---------NSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVK 419 (487)
Q Consensus 352 ~v~~~~~~pq~~~---L~~~~~~~~I~HGG~---------gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 419 (487)
||.+.+|+|+.++ |+.++.+++..-+.. +-+.|++++|+|+|+.+ ...++..+++ .|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 8889999998554 545565555533332 35789999999999754 5577888888 89999984
Q ss_pred ecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHh
Q 011396 420 VNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAAN 460 (487)
Q Consensus 420 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~ 460 (487)
+.+++.+++..+.. ++-..+++|+++.++.+++
T Consensus 290 -------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK 322 (339)
T ss_dssp -------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT
T ss_pred -------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc
Confidence 46889999988753 3357899999999998883
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.42 E-value=0.12 Score=49.35 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=62.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhc-CCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCc-eEEeCCCCCCCCCCCch
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQ-HNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSI-STIFLPPVSFDDLPDDV 89 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r-~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~ 89 (487)
++|+++...+.|++.=...+.++|.++ .+.+|++++.+. ...++...| .+ .++.++.. ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~----------~~~l~~~~p-~i~~v~~~~~~---~~~~-- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAW----------CRPLLSRMP-EVNEAIPMPLG---HGAL-- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGG----------GHHHHTTCT-TEEEEEEC------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcc----------hhHHHhcCC-ccCEEEEecCC---cccc--
Confidence 379999988889998889999999664 379999999875 233344333 23 23333211 0000
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEE
Q 011396 90 RMETRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIF 145 (487)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 145 (487)
....+.++.+. ++..++|++|.-.-..-...++...|+|..+.
T Consensus 65 ------------~~~~~~~l~~~-l~~~~~D~vid~~~~~~sa~~~~~~~~~~~ig 107 (348)
T 1psw_A 65 ------------EIGERRKLGHS-LREKRYDRAYVLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp ------------CHHHHHHHHHH-TTTTTCSEEEECSCCSGGGHHHHHTTCSEEEE
T ss_pred ------------chHHHHHHHHH-HHhcCCCEEEECCCChHHHHHHHHhCCCEEec
Confidence 01112223333 35568999883222344557778889997543
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.36 E-value=0.16 Score=50.13 Aligned_cols=84 Identities=19% Similarity=0.035 Sum_probs=56.2
Q ss_pred CCeeecccCCc---cccccccccccccc--c--ccchhHHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCC
Q 011396 351 VGLVVPSWSPQ---VQVLRHGSTGGFLS--H--CGWNSILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNEN 423 (487)
Q Consensus 351 ~~v~~~~~~pq---~~~L~~~~~~~~I~--H--GG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 423 (487)
.+|.+.+++|+ ..+++.++ +||. . |=..++.||+++|+|+|+ -..+ ....+++ -..|+.++.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~-~~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNW-HSNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGT-BTTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhc-CCCEEEeCC---
Confidence 36788899986 45777788 6553 2 323578999999999997 3221 2234444 457877764
Q ss_pred CCcCHHHHHHHHHHhccCchhHHHHHH
Q 011396 424 GLVGREDIANYAKGLIQGEEGKLLRSK 450 (487)
Q Consensus 424 ~~~~~~~l~~~i~~ll~~~~~~~~r~~ 450 (487)
-++++++++|.++++| +..+++
T Consensus 364 --~d~~~la~ai~~ll~~---~~~~~~ 385 (413)
T 2x0d_A 364 --LNPENIAETLVELCMS---FNNRDV 385 (413)
T ss_dssp --CSHHHHHHHHHHHHHH---TC----
T ss_pred --CCHHHHHHHHHHHHcC---HHHHHH
Confidence 3789999999999987 444443
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=88.09 E-value=0.2 Score=47.46 Aligned_cols=131 Identities=14% Similarity=0.034 Sum_probs=75.6
Q ss_pred CcEEEEEecCC---CCCCHHHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeee
Q 011396 279 ESVLFVCFGSG---GTLSPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVV 355 (487)
Q Consensus 279 ~~~v~vs~Gs~---~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~ 355 (487)
++.|.+.-|+. ..++.+.+.++++.|...+.++++..++..+ ..+.+.+.... .++.+
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e-----------------~~~~~~i~~~~--~~~~l 238 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHE-----------------EERAKRLAEGF--AYVEV 238 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHH-----------------HHHHHHHHTTC--TTEEE
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHH-----------------HHHHHHHHhhC--Ccccc
Confidence 45788877774 5577788888888887667776654443322 00111111111 12322
Q ss_pred ccc--CCc-cccccccccccccccccchhHHHHHhhCCceecc--ccccccchhhHhhhhhccce-EEee-----ecCCC
Q 011396 356 PSW--SPQ-VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAW--PLYAEQKMNAVLLIDDLKVS-FRVK-----VNENG 424 (487)
Q Consensus 356 ~~~--~pq-~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~~G~G-~~l~-----~~~~~ 424 (487)
.+- +.+ .+++++++ ++|+.=. |+++=|.+.|+|+|++ |..... ++- +|-. ..+. -..
T Consensus 239 ~g~~sl~el~ali~~a~--l~I~~DS-G~~HlAaa~g~P~v~lfg~t~p~~--~~P-----~~~~~~~~~~~~~cm~~-- 306 (326)
T 2gt1_A 239 LPKMSLEGVARVLAGAK--FVVSVDT-GLSHLTAALDRPNITVYGPTDPGL--IGG-----YGKNQMVCRAPGNELSQ-- 306 (326)
T ss_dssp CCCCCHHHHHHHHHTCS--EEEEESS-HHHHHHHHTTCCEEEEESSSCHHH--HCC-----CSSSEEEEECGGGCGGG--
T ss_pred cCCCCHHHHHHHHHhCC--EEEecCC-cHHHHHHHcCCCEEEEECCCChhh--cCC-----CCCCceEecCCcccccC--
Confidence 222 223 77899999 9998832 4455577799999988 432221 110 1111 1111 123
Q ss_pred CcCHHHHHHHHHHhccC
Q 011396 425 LVGREDIANYAKGLIQG 441 (487)
Q Consensus 425 ~~~~~~l~~~i~~ll~~ 441 (487)
++++++.++++++|.+
T Consensus 307 -I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 307 -LTANAVKQFIEENAEK 322 (326)
T ss_dssp -CCHHHHHHHHHHTTTT
T ss_pred -CCHHHHHHHHHHHHHH
Confidence 8999999999999975
No 58
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.89 E-value=4.2 Score=36.74 Aligned_cols=37 Identities=16% Similarity=0.100 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
|+|||+.-==+. +.--+.+|+++|.+. | +|+++.|..
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~-g-~V~VvAP~~ 37 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSL-G-RVVVVAPDR 37 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESS
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhC-C-CEEEEeeCC
Confidence 457777653332 223377889999665 7 599998876
No 59
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=84.30 E-value=4.4 Score=36.47 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
|||++.-==+. |.--+.+|+++|.+. | +|+++.|..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~ 37 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSL-G-RVVVVAPDR 37 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESS
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhc-C-CEEEEecCC
Confidence 57777763333 444578899999665 6 999999887
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=79.67 E-value=52 Score=32.79 Aligned_cols=110 Identities=11% Similarity=-0.017 Sum_probs=72.0
Q ss_pred CeeecccCCc---cccccccccccccc---cccch-hHHHHHhhC---CceeccccccccchhhHhhhhhcc-ceEEeee
Q 011396 352 GLVVPSWSPQ---VQVLRHGSTGGFLS---HCGWN-SILESIVHG---VPIIAWPLYAEQKMNAVLLIDDLK-VSFRVKV 420 (487)
Q Consensus 352 ~v~~~~~~pq---~~~L~~~~~~~~I~---HGG~g-t~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~ 420 (487)
.|++.+.+|+ .+++..++ +|+. +=|.| +..|++++| .|.|+--+.+ -.+. +| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~AD--v~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG-------a~~~-l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRAD--LLIFNSTVDGQNLSTFEAPLVNERDADVILSETCG-------AAEV-LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCS--EEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT-------THHH-HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhcc--EEEECcccccCChhHHHHHHhCCCCCCEEEeCCCC-------CHHH-hCCCEEEECC
Confidence 4666677776 45666677 4442 45777 568999996 5665543332 1222 32 4677765
Q ss_pred cCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhh
Q 011396 421 NENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNL 482 (487)
Q Consensus 421 ~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 482 (487)
.+.++++++|.++|+++. ++-+++.+++.+.+++ -....-.+.|++.|+..
T Consensus 423 -----~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALAAGP-RQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp -----TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 478999999999998632 3455666666666653 35667788888888764
No 61
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=77.57 E-value=22 Score=30.56 Aligned_cols=104 Identities=15% Similarity=0.117 Sum_probs=59.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCCchh
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPDDVR 90 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 90 (487)
+..|.+.+..+.|-..-.+.+|-..+.+ |++|.|+..-... ... ........+ .+.+...... + .. +..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~-G~rV~~vQF~Kg~---~~~-gE~~~l~~L--~v~~~~~g~g-f-~~-~~~- 96 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGH-GKNVGVVQFIKGT---WPN-GERNLLEPH--GVEFQVMATG-F-TW-ETQ- 96 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHT-TCCEEEEESSCCS---SCC-HHHHHHGGG--TCEEEECCTT-C-CC-CGG-
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeeCCC---CCc-cHHHHHHhC--CcEEEEcccc-c-cc-CCC-
Confidence 4568888889999999999999999887 9999999754410 000 112233434 2666665531 1 11 111
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEEeCCCcc
Q 011396 91 METRITLTLARSLSSLRDALKVLAESTRLVALVVDIFGS 129 (487)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~ 129 (487)
.... ........+.. +++.+.+.++|+||.|-+..
T Consensus 97 ~~~~---~~~~a~~~l~~-a~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 97 NREA---DTAACMAVWQH-GKRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp GHHH---HHHHHHHHHHH-HHHHTTCTTCSEEEEETHHH
T ss_pred CcHH---HHHHHHHHHHH-HHHHHhcCCCCEEEEeCCCc
Confidence 1111 11111222222 22334566899999998543
No 62
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=74.22 E-value=10 Score=36.66 Aligned_cols=36 Identities=6% Similarity=-0.134 Sum_probs=26.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 8 QIPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 8 ~~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
|+++++|+++..+..+ +.+++++.+. |++|.++..+
T Consensus 4 m~~~~~ilI~g~g~~~-----~~~~~a~~~~-G~~~v~v~~~ 39 (403)
T 4dim_A 4 MYDNKRLLILGAGRGQ-----LGLYKAAKEL-GIHTIAGTMP 39 (403)
T ss_dssp --CCCEEEEECCCGGG-----HHHHHHHHHH-TCEEEEEECS
T ss_pred ccCCCEEEEECCcHhH-----HHHHHHHHHC-CCEEEEEcCC
Confidence 5567889999877543 5688888776 9999998653
No 63
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=70.11 E-value=24 Score=29.92 Aligned_cols=37 Identities=14% Similarity=0.328 Sum_probs=29.8
Q ss_pred EEEEE-cCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMV-PTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~-~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.|.|. +-|+-|-..=...||..|+++ |++|.++-.+.
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~-g~~vlliD~D~ 40 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRS-GYNIAVVDTDP 40 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 34444 457789999999999999887 99999987654
No 64
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=70.02 E-value=12 Score=36.50 Aligned_cols=33 Identities=6% Similarity=-0.067 Sum_probs=21.5
Q ss_pred HHHHhcCCCceEEEeC--CCcchHHHHHHHhCCCe
Q 011396 110 LKVLAESTRLVALVVD--IFGSAAFDVANEFGVPV 142 (487)
Q Consensus 110 l~~~~~~~~pD~vI~D--~~~~~~~~~A~~lgIP~ 142 (487)
+.++.++.++|.|+.- .....+..+|+.+|+|.
T Consensus 67 ~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 67 VRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 3344445589998853 33344557889999994
No 65
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=68.87 E-value=5.5 Score=34.82 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=33.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+++||++.-.|+.|-.+ ...|.+.|.++ |++|.++.++.
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~-g~eV~vv~T~~ 41 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQE-EREVHFLISKA 41 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHT-TCEEEEEECHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEECcc
Confidence 45789988888888777 89999999887 99999999886
No 66
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=68.02 E-value=2.7 Score=41.18 Aligned_cols=40 Identities=10% Similarity=0.195 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCC-c----cCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 10 PRAHVAMVPTPG-I----GHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 10 ~~~~Il~~~~~~-~----GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+++||+++.... . |=...+..||++|+++ ||+|+++++..
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~-GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHc-CCceEEEEecC
Confidence 457887776332 1 3335689999999887 99999999764
No 67
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=67.54 E-value=26 Score=34.91 Aligned_cols=109 Identities=12% Similarity=0.055 Sum_probs=67.9
Q ss_pred ee-ecccCCcc---ccccccccccccc---cccch-hHHHHHhhCC-----ceeccccccccchhhHhhhhhccceEEee
Q 011396 353 LV-VPSWSPQV---QVLRHGSTGGFLS---HCGWN-SILESIVHGV-----PIIAWPLYAEQKMNAVLLIDDLKVSFRVK 419 (487)
Q Consensus 353 v~-~~~~~pq~---~~L~~~~~~~~I~---HGG~g-t~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 419 (487)
++ +.+++++. ++++.+| +||. .=|.| ++.||+++|+ |+|+--+.+- .+. +.-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~AD--v~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~-------~~~-l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSD--VGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA-------ANE-LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCS--EEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG-------GGT-CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHcc--EEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC-------HHH-hCCeEEEC
Confidence 44 35777764 5667778 5553 33554 8999999998 6665443321 111 22356665
Q ss_pred ecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhh
Q 011396 420 VNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNL 482 (487)
Q Consensus 420 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 482 (487)
. -+.++++++|.++|+++. +.-+++.++..+.+++ -+...-++.+++.+++.
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred C-----CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 4 478999999999998531 2234444455555543 25677788888888765
No 68
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=67.52 E-value=15 Score=29.56 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=27.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.+++++..|. | +.|++++++.|.++ |.+|+++ ...
T Consensus 19 ~~~llIaGG~-G-iaPl~sm~~~l~~~-~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT-G-IVEVYPIAKAWQEI-GNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHT-TCEEEEE-EEE
T ss_pred CeEEEEECcC-c-HHHHHHHHHHHHhc-CCcEEEE-EeC
Confidence 4688887444 3 89999999999887 9999998 543
No 69
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=66.56 E-value=17 Score=37.86 Aligned_cols=43 Identities=19% Similarity=0.043 Sum_probs=30.3
Q ss_pred ecccCCcc---------ccccccccccccc----cccchhHHHHHhhCCceecccccc
Q 011396 355 VPSWSPQV---------QVLRHGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYA 399 (487)
Q Consensus 355 ~~~~~pq~---------~~L~~~~~~~~I~----HGG~gt~~eal~~GvP~l~~P~~~ 399 (487)
+..|++.. .+++.++ +||. -|-..+.+||+++|+|+|+.-..+
T Consensus 497 ~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 497 HPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp CCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred eccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 44677664 3677788 5553 234459999999999999876543
No 70
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=66.11 E-value=11 Score=31.79 Aligned_cols=78 Identities=10% Similarity=0.030 Sum_probs=43.8
Q ss_pred eecccCCc-cccccccccccccccccchhHHHH---HhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHH
Q 011396 354 VVPSWSPQ-VQVLRHGSTGGFLSHCGWNSILES---IVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGRE 429 (487)
Q Consensus 354 ~~~~~~pq-~~~L~~~~~~~~I~HGG~gt~~ea---l~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 429 (487)
+++.+.++ ..++..-+...++-=||.||+.|+ +.+++|++++|.+. .....+.. .......- . -+++
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~-~~~~~i~~-~----~~~~ 162 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTS-LDAGLVHV-A----ADVA 162 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHH-HCTTTEEE-E----SSHH
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCCh-hhcCeEEE-c----CCHH
Confidence 34455555 444444333466677999986654 67999999999843 11112222 11111111 1 3778
Q ss_pred HHHHHHHHhcc
Q 011396 430 DIANYAKGLIQ 440 (487)
Q Consensus 430 ~l~~~i~~ll~ 440 (487)
++.+.+.+.+.
T Consensus 163 e~~~~l~~~~~ 173 (176)
T 2iz6_A 163 GAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88777776653
No 71
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=65.73 E-value=45 Score=29.26 Aligned_cols=155 Identities=10% Similarity=-0.033 Sum_probs=84.5
Q ss_pred ccccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCC
Q 011396 272 WLDEQPSESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGV 351 (487)
Q Consensus 272 ~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 351 (487)
|++-. .++++.|+.|. .-...+..|...+..+.++-... .+.+.......
T Consensus 26 fl~L~-gk~VLVVGgG~-------va~~ka~~Ll~~GA~VtVvap~~----------------------~~~l~~l~~~~ 75 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGT-------IATRRIKGFLQEGAAITVVAPTV----------------------SAEINEWEAKG 75 (223)
T ss_dssp EECCT-TCCEEEECCSH-------HHHHHHHHHGGGCCCEEEECSSC----------------------CHHHHHHHHTT
T ss_pred EEEcC-CCEEEEECCCH-------HHHHHHHHHHHCCCEEEEECCCC----------------------CHHHHHHHHcC
Confidence 44443 34577776664 23445566667788876554321 12222222223
Q ss_pred CeeecccCCccccccccccccccccccchhHHHHHhhCCceeccccc-cccchhh-----HhhhhhccceEEeeecCCCC
Q 011396 352 GLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY-AEQKMNA-----VLLIDDLKVSFRVKVNENGL 425 (487)
Q Consensus 352 ~v~~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~-~DQ~~na-----~~v~~~~G~G~~l~~~~~~~ 425 (487)
++.+....-+...|..++ ++|.--|.-.+.+.++.-.- .-+|+. .|.+..+ ..+.+ -++-+.+.+...+.
T Consensus 76 ~i~~i~~~~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~r-g~l~iaIST~G~sP 151 (223)
T 3dfz_A 76 QLRVKRKKVGEEDLLNVF--FIVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSR-GRLSLAISTDGASP 151 (223)
T ss_dssp SCEEECSCCCGGGSSSCS--EEEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEE-TTEEEEEECTTSCH
T ss_pred CcEEEECCCCHhHhCCCC--EEEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEe-CCEEEEEECCCCCc
Confidence 343332222345566777 88888888777776665332 333332 3555444 33344 35666666655333
Q ss_pred cCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhh
Q 011396 426 VGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANA 461 (487)
Q Consensus 426 ~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~ 461 (487)
.-...|++.|+.++.. .-..+-+.+.++.+.+++.
T Consensus 152 ~la~~iR~~ie~~lp~-~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 152 LLTKRIKEDLSSNYDE-SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHHHSCT-HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccH-HHHHHHHHHHHHHHHHHHH
Confidence 4557788889888854 2346777788888888763
No 72
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=64.72 E-value=15 Score=36.21 Aligned_cols=37 Identities=16% Similarity=0.281 Sum_probs=33.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-+++...|+.|-..=++.+|...+.+ |..|.|++.+.
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~-g~~vl~fSlEm 235 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEM 235 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHc-CCEEEEEECCC
Confidence 47888889999999999999999887 99999999876
No 73
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=64.15 E-value=78 Score=29.13 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+++|++. |+.|-+- .+|++.|.++ ||+|+.+.-.
T Consensus 5 ~~~vlVT--GatG~iG--~~l~~~L~~~-G~~V~~~~r~ 38 (341)
T 3enk_A 5 KGTILVT--GGAGYIG--SHTAVELLAH-GYDVVIADNL 38 (341)
T ss_dssp SCEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEECCC
T ss_pred CcEEEEe--cCCcHHH--HHHHHHHHHC-CCcEEEEecC
Confidence 3455544 3344332 5789999888 9999988643
No 74
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=63.92 E-value=8.2 Score=40.84 Aligned_cols=114 Identities=9% Similarity=0.042 Sum_probs=77.3
Q ss_pred ecccCCccccccccccccccccccchhHHHHHhhCCceeccccccccchhhHhh-----hhhccceEEeeecCCCCcCHH
Q 011396 355 VPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYAEQKMNAVLL-----IDDLKVSFRVKVNENGLVGRE 429 (487)
Q Consensus 355 ~~~~~pq~~~L~~~~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v-----~~~~G~G~~l~~~~~~~~~~~ 429 (487)
+.++.+-.++|..+| ++||=-. ..+.|.+..++|+|......|++.+..|- .+ .--|..+ -+.+
T Consensus 603 ~~~~~di~~ll~~aD--~lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~-~~pg~~~-------~~~~ 671 (729)
T 3l7i_A 603 VSNYNDVSELFLISD--CLITDYS-SVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYME-DLPGPIY-------TEPY 671 (729)
T ss_dssp CTTCSCHHHHHHTCS--EEEESSC-THHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTS-SSSSCEE-------SSHH
T ss_pred CCCCcCHHHHHHHhC--EEEeech-HHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhH-hCCCCeE-------CCHH
Confidence 344555577888888 9999864 78899999999999998877776542100 11 1112222 4789
Q ss_pred HHHHHHHHhccCchhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhh
Q 011396 430 DIANYAKGLIQGEEGKLLRSKMRALKDAAANALSPDGSSTKSLAQVAQKWKNL 482 (487)
Q Consensus 430 ~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 482 (487)
+|.++|.....+. ..++++.+++.+..-.. +.|.++.+.++.+.+..+.-
T Consensus 672 eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~~ 721 (729)
T 3l7i_A 672 GLAKELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKEQ 721 (729)
T ss_dssp HHHHHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcCc
Confidence 9999998876531 56888888888887643 34566666777777766543
No 75
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=63.71 E-value=54 Score=30.80 Aligned_cols=37 Identities=14% Similarity=0.219 Sum_probs=32.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-+++...|+.|-..=++.+|..++.. |..|.|++.+.
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~-g~~Vl~fSlEm 84 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALND-DRGVAVFSLEM 84 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEeCCC
Confidence 36778889999999999999999876 99999999875
No 76
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=60.88 E-value=39 Score=29.47 Aligned_cols=34 Identities=3% Similarity=0.062 Sum_probs=22.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCC--EEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNF--LVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH--~Vt~~~~~ 49 (487)
+||+|+..|+.. -+.++.++|.+. +| +|..+.+.
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~-~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESG-KVNASIELVISD 37 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTT-SSCEEEEEEEES
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhC-CCCCeEEEEEeC
Confidence 578887655543 366677788665 77 77766654
No 77
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=58.29 E-value=13 Score=29.77 Aligned_cols=38 Identities=11% Similarity=0.029 Sum_probs=33.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+++|++.+.++-+|-....=++..|... |++|.+....
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~-G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNA-GFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHT-TCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 4679999999999999999999999776 9999988754
No 78
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=56.47 E-value=39 Score=30.18 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
||++.-==+. |.--+.+|+++|.+. | +|+++.|..
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~ 36 (247)
T 1j9j_A 2 RILVTNDDGI-QSKGIIVLAELLSEE-H-EVFVVAPDK 36 (247)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESS
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCC
Confidence 4555542222 233378899999665 6 899999887
No 79
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=54.27 E-value=15 Score=31.03 Aligned_cols=38 Identities=11% Similarity=-0.000 Sum_probs=31.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++||++.-.|+.|=.. ...+.+.|.++ |++|.++.++.
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~-g~~V~vv~T~~ 42 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSK-FDEVNVIASTN 42 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTT-CSEEEEEECTG
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHC-CCEEEEEECcC
Confidence 4688888878866664 89999999776 99999999986
No 80
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=54.07 E-value=43 Score=30.02 Aligned_cols=36 Identities=22% Similarity=0.227 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
|||++.-==+. |.--+.+|+++|.+. | +|+++.|..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~-g-~V~VVAP~~ 37 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREF-A-DVQVVAPDR 37 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESS
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhC-C-cEEEEeeCC
Confidence 46766653332 334478899999554 4 999999887
No 81
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=53.75 E-value=17 Score=35.85 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=32.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-+++...|+.|-..=++.+|...+.+.|..|.|++.+.
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~ 239 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEM 239 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 46778889999999999999998764488999999875
No 82
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=53.55 E-value=17 Score=31.05 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=31.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+||++.-.|+.| .+=...+.+.|.++ |++|.++.++.
T Consensus 2 k~IllgvTGs~a-a~k~~~l~~~L~~~-g~~V~vv~T~~ 38 (189)
T 2ejb_A 2 QKIALCITGASG-VIYGIKLLQVLEEL-DFSVDLVISRN 38 (189)
T ss_dssp CEEEEEECSSTT-HHHHHHHHHHHHHT-TCEEEEEECHH
T ss_pred CEEEEEEECHHH-HHHHHHHHHHHHHC-CCEEEEEEChh
Confidence 578888888888 44689999999887 99999999886
No 83
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=53.51 E-value=89 Score=27.44 Aligned_cols=116 Identities=6% Similarity=-0.001 Sum_probs=0.0
Q ss_pred cCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCC
Q 011396 4 QNSKQIPRAHVAMVPTPGIGHLIPQVELAKRLVHQH-NFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSF 82 (487)
Q Consensus 4 ~~~~~~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (487)
+......|+||+|+..++. .-+.++.+.|.+.. +++|..+.+.. ............++.+..++...+
T Consensus 15 ~~~~~~~~~rI~~l~SG~g---~~~~~~l~~l~~~~~~~~I~~Vvt~~--------~~~~~~~~A~~~gIp~~~~~~~~~ 83 (229)
T 3auf_A 15 NLYFQGHMIRIGVLISGSG---TNLQAILDGCREGRIPGRVAVVISDR--------ADAYGLERARRAGVDALHMDPAAY 83 (229)
T ss_dssp SSSCBTTCEEEEEEESSCC---HHHHHHHHHHHTTSSSEEEEEEEESS--------TTCHHHHHHHHTTCEEEECCGGGS
T ss_pred cccccCCCcEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEcCC--------CchHHHHHHHHcCCCEEEECcccc
Q ss_pred CCCCCchhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEE-eCCCcchHHHHHHHhCCCeEEEecc
Q 011396 83 DDLPDDVRMETRITLTLARSLSSLRDALKVLAESTRLVALV-VDIFGSAAFDVANEFGVPVYIFFTT 148 (487)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI-~D~~~~~~~~~A~~lgIP~v~~~~~ 148 (487)
.+. +.+.+.+.+.+++.+||+|| ..++-.-...+-......++-+.++
T Consensus 84 ~~r------------------~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 84 PSR------------------TAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp SSH------------------HHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred cch------------------hhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
No 84
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=52.74 E-value=45 Score=32.73 Aligned_cols=39 Identities=18% Similarity=0.266 Sum_probs=33.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+..|+++..++.|-..-...||..|.++ |++|.++..+.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~-G~kVllv~~D~ 138 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKR-GYKVGVVCSDT 138 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTT-TCCEEEEECCC
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 4567778888899999999999999887 99999998775
No 85
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=52.53 E-value=76 Score=31.58 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=23.8
Q ss_pred HHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEE
Q 011396 106 LRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYI 144 (487)
Q Consensus 106 ~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~ 144 (487)
+.+.+++. +||++|... ....+|+++|||++.
T Consensus 409 l~~~i~~~----~pDL~ig~~---~~~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 409 FEEFVKRI----KPDLIGSGI---KEKFIFQKMGIPFRE 440 (492)
T ss_dssp HHHHHHHH----CCSEEEECH---HHHHHHHHTTCCEEE
T ss_pred HHHHHHhc----CCcEEEeCc---chhHHHHHcCCCEEe
Confidence 44445544 999999965 346799999999874
No 86
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=52.50 E-value=12 Score=26.47 Aligned_cols=49 Identities=18% Similarity=0.257 Sum_probs=33.2
Q ss_pred hCCceeccccccccch-hhHhhhh-hccceEEeeecCCCCcCHHHHHHHHHHhcc
Q 011396 388 HGVPIIAWPLYAEQKM-NAVLLID-DLKVSFRVKVNENGLVGREDIANYAKGLIQ 440 (487)
Q Consensus 388 ~GvP~l~~P~~~DQ~~-na~~v~~-~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 440 (487)
.|+|++++--.+.|.+ |-..-+. +-|+..-+-+. ..++++.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvlks----tdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKS----TDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEEC----CCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhhcc----CCHHHHHHHHHHHHH
Confidence 5899988887777766 4444444 03444444444 589999999988774
No 87
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=52.05 E-value=53 Score=29.95 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
||++.-==+. +.--+.+|+++|.+. | +|+++.|..
T Consensus 2 ~ILlTNDDGi-~ApGi~aL~~aL~~~-g-~V~VVAP~~ 36 (280)
T 1l5x_A 2 KILVTNDDGV-HSPGLRLLYQFALSL-G-DVDVVAPES 36 (280)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHGGG-S-EEEEEEESS
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCC
Confidence 4555542222 233378899999776 7 999999877
No 88
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=51.96 E-value=21 Score=28.41 Aligned_cols=38 Identities=8% Similarity=0.130 Sum_probs=28.0
Q ss_pred cEEE-EEcCC--CccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVA-MVPTP--GIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il-~~~~~--~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++++ ++..+ +....+..+.+|...++. ||+|+++.+..
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~-g~eV~vFf~~d 56 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASM-EYETSVFFMIX 56 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEeC
Confidence 3444 44444 456778899999988787 99999998765
No 89
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=51.13 E-value=11 Score=30.56 Aligned_cols=34 Identities=15% Similarity=0.144 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++.||+++.. |++- ..+++.|.++ ||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHT-TCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHC-CCCEEEEECC
Confidence 3467888854 4443 6889999887 9999999764
No 90
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=49.90 E-value=9 Score=34.98 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=36.5
Q ss_pred ccccccccchhHHHHHhh------CCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccC
Q 011396 371 GGFLSHCGWNSILESIVH------GVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQG 441 (487)
Q Consensus 371 ~~~I~HGG~gt~~eal~~------GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 441 (487)
+++|.=||-||+.+++.. ++|++.+|.. . .| . +. + +.++++.+++++++.+
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lg--f-l~--~---~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LG--F-YA--D---WRPAEADKLVKLLAKG 93 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CC--S-SC--C---BCGGGHHHHHHHHHTT
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CC--c-CC--c---CCHHHHHHHHHHHHcC
Confidence 399999999999999875 8898888741 1 11 1 11 1 4677788888888765
No 91
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=49.52 E-value=14 Score=29.98 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=24.2
Q ss_pred CCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 20 PGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 20 ~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-..-.+--.+=++..|.++ ||+|++++++.
T Consensus 17 E~Pvq~p~~lYl~~~Lk~~-G~~v~VA~npA 46 (157)
T 1kjn_A 17 ESPVQIPLAIYTSHKLKKK-GFRVTVTANPA 46 (157)
T ss_dssp CSTTHHHHHHHHHHHHHHT-TCEEEEEECHH
T ss_pred CCcchhhHHHHHHHHHHhc-CCeeEEecCHH
Confidence 3445666678899999887 99999999986
No 92
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=49.51 E-value=17 Score=31.64 Aligned_cols=38 Identities=8% Similarity=-0.008 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCccCHHH-HHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIP-QVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P-~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++||++.-.|+ +..+- .+.|.+.|.++ |++|.++.++.
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~-g~eV~vv~T~~ 43 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAE-GAEVRPVVSYT 43 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHT-TCEEEEEECC-
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhC-CCEEEEEEehH
Confidence 46788877776 56776 89999999887 99999999986
No 93
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=49.15 E-value=12 Score=32.27 Aligned_cols=40 Identities=3% Similarity=-0.099 Sum_probs=32.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.+++||++.-.|+.|=.. ...|.+.|.++ |++|.++.++.
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~-g~~V~vv~T~~ 45 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSF-FKEIRVVMTKT 45 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTT-SSEEEEEECHH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEEchh
Confidence 345689888888877665 78999999776 99999999875
No 94
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=49.04 E-value=81 Score=31.33 Aligned_cols=38 Identities=8% Similarity=-0.107 Sum_probs=32.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-+++...|+.|-..=.+.+|..++.+.|..|.|++.+.
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~ 281 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEE 281 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSS
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccC
Confidence 36777789999999999999999654488999999876
No 95
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=48.74 E-value=18 Score=31.27 Aligned_cols=38 Identities=24% Similarity=0.167 Sum_probs=32.1
Q ss_pred CcEEEEEcCCCccCHH-HHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLI-PQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~-P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++||++.-.|+ +..+ -.+.|.+.|.++ |++|.++.++.
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~-g~eV~vv~T~~ 45 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVEL-GAKVTPFVTHT 45 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHT-TCEEEEECSSC
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhC-CCEEEEEEChh
Confidence 46888888777 5556 799999999887 99999999886
No 96
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=48.44 E-value=20 Score=31.61 Aligned_cols=39 Identities=21% Similarity=0.269 Sum_probs=34.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+++|++..-|+.|-.+-++++|..|+++ |++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~-G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQ-GVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 5789999999999999999999999887 99998887654
No 97
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=48.04 E-value=28 Score=34.33 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=32.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
--+++...|+.|=..=++.+|..++...|..|.|++.+.
T Consensus 204 ~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~ 242 (454)
T 2r6a_A 204 DLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEM 242 (454)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 347888889999999999999998763388999999875
No 98
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=47.44 E-value=70 Score=31.76 Aligned_cols=25 Identities=16% Similarity=-0.036 Sum_probs=19.9
Q ss_pred CCceEEEeCCCcchHHHHHHHhCCCeEE
Q 011396 117 TRLVALVVDIFGSAAFDVANEFGVPVYI 144 (487)
Q Consensus 117 ~~pD~vI~D~~~~~~~~~A~~lgIP~v~ 144 (487)
.+||++|... ....+|+++|||++.
T Consensus 400 ~~pDL~ig~~---~~~~~a~k~gIP~~~ 424 (483)
T 3pdi_A 400 YQADILIAGG---RNMYTALKGRVPFLD 424 (483)
T ss_dssp TTCSEEECCG---GGHHHHHHTTCCBCC
T ss_pred cCCCEEEECC---chhHHHHHcCCCEEE
Confidence 3999999865 345789999999764
No 99
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=46.76 E-value=43 Score=31.92 Aligned_cols=37 Identities=3% Similarity=-0.086 Sum_probs=32.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-+++...++.|-..=.+.++..++++ |..|.|+..+.
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~-g~~vlyi~~E~ 112 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKA-GGTCAFIDAEH 112 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 46777788999999999999999877 99999999875
No 100
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=46.71 E-value=1.3e+02 Score=25.90 Aligned_cols=109 Identities=3% Similarity=0.036 Sum_probs=0.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCCch
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQH-NFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPDDV 89 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 89 (487)
|++|+++..++.+ -+.++.++|.+.. +|+|..+.+.. ............++.+..++.....+
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~--------~~~~v~~~A~~~gIp~~~~~~~~~~~----- 66 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDR--------PGAKVIERAARENVPAFVFSPKDYPS----- 66 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESS--------TTCHHHHHHHHTTCCEEECCGGGSSS-----
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCC--------CCcHHHHHHHHcCCCEEEeCcccccc-----
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEE-eCCCcchHHHHHHHhCCCeEEEecc
Q 011396 90 RMETRITLTLARSLSSLRDALKVLAESTRLVALV-VDIFGSAAFDVANEFGVPVYIFFTT 148 (487)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI-~D~~~~~~~~~A~~lgIP~v~~~~~ 148 (487)
.+.+.+.+.+.+++.+||+|| ..++-.-...+-+.....++-+.++
T Consensus 67 -------------~~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 -------------KAAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -------------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -------------hhhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
No 101
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=46.49 E-value=1.1e+02 Score=27.42 Aligned_cols=31 Identities=23% Similarity=0.147 Sum_probs=21.9
Q ss_pred CCceEEE-eCCCc-chHHHHHHHhCCCeEEEec
Q 011396 117 TRLVALV-VDIFG-SAAFDVANEFGVPVYIFFT 147 (487)
Q Consensus 117 ~~pD~vI-~D~~~-~~~~~~A~~lgIP~v~~~~ 147 (487)
.-||+|| .|+.. .-+..=|.++|||+|.+.-
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivD 189 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALAD 189 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCC
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEec
Confidence 4789765 67644 3456678889999988643
No 102
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=46.49 E-value=1.4e+02 Score=26.55 Aligned_cols=33 Identities=15% Similarity=-0.019 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++++.++. -+ -.++|++|+++ |++|+.+...
T Consensus 6 k~vlVTGas~-gI--G~~~a~~l~~~-G~~V~~~~r~ 38 (281)
T 3m1a_A 6 KVWLVTGASS-GF--GRAIAEAAVAA-GDTVIGTARR 38 (281)
T ss_dssp CEEEETTTTS-HH--HHHHHHHHHHT-TCEEEEEESS
T ss_pred cEEEEECCCC-hH--HHHHHHHHHHC-CCEEEEEeCC
Confidence 4677775543 23 35789999887 9999887654
No 103
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=45.78 E-value=12 Score=33.82 Aligned_cols=53 Identities=15% Similarity=0.257 Sum_probs=37.8
Q ss_pred ccccccccccccchhHHHHHhh---CCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccC
Q 011396 367 HGSTGGFLSHCGWNSILESIVH---GVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQG 441 (487)
Q Consensus 367 ~~~~~~~I~HGG~gt~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 441 (487)
.++ ++|+=||-||++++++. ++|++.++.. . . |... + +.++++.++++.++++
T Consensus 41 ~~D--~vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~--Gfl~---~---~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TAD--LIVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-L--GFLT---S---YTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCS--EEEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-C--CSSC---C---BCGGGHHHHHHHHHTT
T ss_pred CCC--EEEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-C--CccC---c---CCHHHHHHHHHHHHcC
Confidence 455 99999999999999887 7888777621 1 1 1111 1 5677888888888765
No 104
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=44.80 E-value=1.3e+02 Score=29.58 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=24.3
Q ss_pred HHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEE
Q 011396 106 LRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYI 144 (487)
Q Consensus 106 ~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~ 144 (487)
+++.+++. +||++|.+.. ...+|+++|||++.
T Consensus 367 le~~i~~~----~pDllig~~~---~~~~a~k~gip~~~ 398 (458)
T 3pdi_B 367 LEHAARAG----QAQLVIGNSH---ALASARRLGVPLLR 398 (458)
T ss_dssp HHHHHHHH----TCSEEEECTT---HHHHHHHTTCCEEE
T ss_pred HHHHHHhc----CCCEEEEChh---HHHHHHHcCCCEEE
Confidence 34445544 9999999864 46789999999876
No 105
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=44.03 E-value=18 Score=29.92 Aligned_cols=39 Identities=21% Similarity=0.024 Sum_probs=34.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++|++.+.++-+|-....-++..|... |++|.+....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~-G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDA-GFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHT-TCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 46789999999999999999999999776 9999988643
No 106
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=43.40 E-value=78 Score=30.88 Aligned_cols=35 Identities=11% Similarity=0.086 Sum_probs=25.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++|+++..++ .+.+++..|+++.|++++++.+.
T Consensus 20 ~~~~iliiG~g~-----r~~a~a~~~~~~~g~~~v~~~~~ 54 (451)
T 2yrx_A 20 SHMNVLVIGRGG-----REHAIAWKAAQSPLVGKLYVAPG 54 (451)
T ss_dssp SSEEEEEEECSH-----HHHHHHHHHHTCTTEEEEEEEEC
T ss_pred CCCEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECC
Confidence 357899988763 46788888877668888777654
No 107
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=42.96 E-value=22 Score=31.39 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=24.5
Q ss_pred cccccccccchhHHHHHhhCCceecccccc
Q 011396 370 TGGFLSHCGWNSILESIVHGVPIIAWPLYA 399 (487)
Q Consensus 370 ~~~~I~HGG~gt~~eal~~GvP~l~~P~~~ 399 (487)
++++|+.||.+...... .++|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 34999999999998875 689999999853
No 108
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=42.93 E-value=16 Score=31.40 Aligned_cols=30 Identities=10% Similarity=0.165 Sum_probs=25.0
Q ss_pred ccccccccccchhHHHHHhhCCceecccccc
Q 011396 369 STGGFLSHCGWNSILESIVHGVPIIAWPLYA 399 (487)
Q Consensus 369 ~~~~~I~HGG~gt~~eal~~GvP~l~~P~~~ 399 (487)
.++++|+.||........ .++|+|-++..+
T Consensus 51 ~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 334999999999998875 689999999864
No 109
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=42.83 E-value=48 Score=28.91 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=21.9
Q ss_pred ccccccccchhHHHHH---------hhCCceecccc
Q 011396 371 GGFLSHCGWNSILESI---------VHGVPIIAWPL 397 (487)
Q Consensus 371 ~~~I~HGG~gt~~eal---------~~GvP~l~~P~ 397 (487)
.+++--||.||+-|.. .+++|++++..
T Consensus 108 a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 108 AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 3677789999988876 57999999874
No 110
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=42.37 E-value=52 Score=31.17 Aligned_cols=37 Identities=5% Similarity=-0.050 Sum_probs=31.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-++++..++.|=..=++.++..+... |..|.|+.++.
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~-gg~VlyId~E~ 99 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKM-GGVAAFIDAEH 99 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc-CCeEEEEeccc
Confidence 35667778889999999999999776 99999998775
No 111
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=42.12 E-value=1.6e+02 Score=25.53 Aligned_cols=34 Identities=32% Similarity=0.383 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.++++++.++.| =-.++|+.|+++ |++|.+....
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~-G~~v~~~~~~ 40 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLAND-GALVAIHYGN 40 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHC-CCeEEEEeCC
Confidence 357778866654 246889999887 9999886543
No 112
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=42.08 E-value=28 Score=30.11 Aligned_cols=39 Identities=21% Similarity=0.063 Sum_probs=34.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+.+|++.+.++..|-....-++..|..+ |++|.++....
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~-G~~v~~LG~~v 126 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESG-GFTVYNLGVDI 126 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHT-TCEEEECCSSB
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHC-CCEEEECCCCC
Confidence 5689999999999999999999999776 99999987643
No 113
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=41.76 E-value=1.1e+02 Score=26.96 Aligned_cols=29 Identities=17% Similarity=0.238 Sum_probs=20.3
Q ss_pred CceEEE-eCCCcc-hHHHHHHHhCCCeEEEe
Q 011396 118 RLVALV-VDIFGS-AAFDVANEFGVPVYIFF 146 (487)
Q Consensus 118 ~pD~vI-~D~~~~-~~~~~A~~lgIP~v~~~ 146 (487)
-||+|| .|+..- -+..=|.++|||+|.+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaiv 187 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLI 187 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEe
Confidence 599766 666433 35567888999998754
No 114
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=40.65 E-value=38 Score=30.44 Aligned_cols=40 Identities=15% Similarity=0.051 Sum_probs=35.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++.+|++.+.++..|-....-++..|..+ |++|.++....
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~-G~~Vi~LG~~v 161 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRAN-GYNVVDLGRDV 161 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHT-TCEEEEEEEEC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCCC
Confidence 35789999999999999999999999776 99999987543
No 115
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=40.25 E-value=40 Score=32.97 Aligned_cols=33 Identities=3% Similarity=0.008 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+++|+++.. |. -.+.+++++.+. |++|..+.+.
T Consensus 6 ~~kiLI~g~---g~--~a~~i~~aa~~~-G~~~v~v~~~ 38 (446)
T 3ouz_A 6 IKSILIANR---GE--IALRALRTIKEM-GKKAICVYSE 38 (446)
T ss_dssp CCEEEECCC---HH--HHHHHHHHHHHT-TCEEEEEEEG
T ss_pred cceEEEECC---CH--HHHHHHHHHHHc-CCEEEEEEcC
Confidence 567888643 22 456888999776 9999888654
No 116
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=40.06 E-value=49 Score=28.81 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=23.3
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhc-CCCEEEEEeCCC
Q 011396 7 KQIPRAHVAMVPTPGIGHLIPQVELAKRLVHQ-HNFLVTIFIPTI 50 (487)
Q Consensus 7 ~~~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r-~GH~Vt~~~~~~ 50 (487)
+|.+++||+++..+..+. +.+|.+++.+. .+++|..+.+..
T Consensus 4 ~~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~ 45 (215)
T 3kcq_A 4 SMKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNN 45 (215)
T ss_dssp ---CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESC
T ss_pred CCCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCC
Confidence 344567888877655433 45566666332 127888887743
No 117
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=39.35 E-value=91 Score=27.08 Aligned_cols=110 Identities=8% Similarity=-0.056 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCCc
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPDD 88 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 88 (487)
.+++||+++..+..+.+..++.-.+. .- +++|..+.+.. ...........++.+..++.....+
T Consensus 10 ~~~~ri~vl~SG~gsnl~all~~~~~--~~-~~eI~~Vis~~---------~a~~~~~A~~~gIp~~~~~~~~~~~---- 73 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLLDAAVG--DY-PARVVAVGVDR---------ECRAAEIAAEASVPVFTVRLADHPS---- 73 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHHHHSST--TC-SEEEEEEEESS---------CCHHHHHHHHTTCCEEECCGGGSSS----
T ss_pred CCCcEEEEEEeCChHHHHHHHHHHhc--cC-CCeEEEEEeCC---------chHHHHHHHHcCCCEEEeCcccccc----
Q ss_pred hhhHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEE-eCCCcchHHHHHHHhCCCeEEEecc
Q 011396 89 VRMETRITLTLARSLSSLRDALKVLAESTRLVALV-VDIFGSAAFDVANEFGVPVYIFFTT 148 (487)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI-~D~~~~~~~~~A~~lgIP~v~~~~~ 148 (487)
...+.+.+.+.+++.+||+|| ..++-.-...+-+.....++-+.++
T Consensus 74 --------------r~~~d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 74 --------------RDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp --------------HHHHHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred --------------hhhhhHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
No 118
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=39.22 E-value=84 Score=28.87 Aligned_cols=39 Identities=10% Similarity=0.124 Sum_probs=33.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQH-NFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~-GH~Vt~~~~~~ 50 (487)
++|+++-..+.|++.=..++.++|.++. +.+|++++.+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~ 40 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEG 40 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGG
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehh
Confidence 3799999999999999999999997653 68999999875
No 119
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=38.81 E-value=31 Score=31.17 Aligned_cols=30 Identities=13% Similarity=0.097 Sum_probs=24.3
Q ss_pred CceEEEeCCCcc------hHHHHHHHhCCCeEEEec
Q 011396 118 RLVALVVDIFGS------AAFDVANEFGVPVYIFFT 147 (487)
Q Consensus 118 ~pD~vI~D~~~~------~~~~~A~~lgIP~v~~~~ 147 (487)
+||+||+..... -++.+|++||+|.++...
T Consensus 112 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 899999876553 577899999999998654
No 120
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=38.30 E-value=37 Score=29.47 Aligned_cols=37 Identities=8% Similarity=0.104 Sum_probs=31.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++||++...|+.+-.. ...|.+.|.++ | +|.++.++.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~-g-~V~vv~T~~ 55 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEW-A-EVRAVVTKS 55 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTT-S-EEEEEECTG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcC-C-CEEEEEcch
Confidence 5689999888888665 89999999776 8 999999986
No 121
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=38.27 E-value=37 Score=29.55 Aligned_cols=40 Identities=13% Similarity=-0.006 Sum_probs=34.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.+.+|++.+.++-.|-....-++..|..+ |++|.++....
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~-G~~Vi~LG~~v 130 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGAN-GFQIVDLGVDV 130 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHT-SCEEEECCSSC
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHC-CCeEEEcCCCC
Confidence 45789999999999999999999999776 99999987653
No 122
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=38.18 E-value=33 Score=30.87 Aligned_cols=30 Identities=10% Similarity=0.019 Sum_probs=24.2
Q ss_pred CceEEEeCCCcc------hHHHHHHHhCCCeEEEec
Q 011396 118 RLVALVVDIFGS------AAFDVANEFGVPVYIFFT 147 (487)
Q Consensus 118 ~pD~vI~D~~~~------~~~~~A~~lgIP~v~~~~ 147 (487)
+||+|++..... -++.+|++||+|.++...
T Consensus 116 ~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 116 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 899999776553 477899999999988654
No 123
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=37.85 E-value=2.1e+02 Score=26.22 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=25.7
Q ss_pred cEEEEEcCCCcc---C--HHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIG---H--LIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~G---H--~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+.|++.|+...+ . ..-+..+++.|.++ |++|.++.++.
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~-~~~vvl~g~~~ 223 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-GYQVVLFGSAK 223 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-TCEEEECCCGG
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC-CCeEEEEeChh
Confidence 457777654222 2 33688999999887 99988875543
No 124
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=37.75 E-value=63 Score=31.65 Aligned_cols=34 Identities=6% Similarity=0.037 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+++|+++.. |. -.+.+++++.+. |++|..+.+..
T Consensus 6 ~k~ILI~g~---g~--~~~~i~~a~~~~-G~~vv~v~~~~ 39 (461)
T 2dzd_A 6 IRKVLVANR---GE--IAIRVFRACTEL-GIRTVAIYSKE 39 (461)
T ss_dssp CSEEEECSC---HH--HHHHHHHHHHHH-TCEEEEEECGG
T ss_pred CcEEEEECC---cH--HHHHHHHHHHHc-CCEEEEEECCc
Confidence 457888742 32 256788899777 99998887643
No 125
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=37.57 E-value=30 Score=33.93 Aligned_cols=36 Identities=8% Similarity=0.074 Sum_probs=23.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
..+++|+++..+++. .+||+.|.+..|....++.+.
T Consensus 19 p~~m~ilvlG~ggre-----~ala~~l~~s~~v~~v~~~pg 54 (442)
T 3lp8_A 19 PGSMNVLVIGSGGRE-----HSMLHHIRKSTLLNKLFIAPG 54 (442)
T ss_dssp -CCEEEEEEECSHHH-----HHHHHHHTTCTTEEEEEEEEC
T ss_pred CCCCEEEEECCChHH-----HHHHHHHHhCCCCCEEEEECC
Confidence 346789999877544 468999977633444455443
No 126
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=37.50 E-value=45 Score=30.02 Aligned_cols=38 Identities=21% Similarity=0.198 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+++||++.-==+. |.--+.+|+++| +. +|+|+++.|..
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l-~~-~~~V~VVAP~~ 47 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTL-AD-LGEVDVVAPDR 47 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHH-TT-TSEEEEEEESS
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHH-Hh-cCCEEEEecCC
Confidence 3578888774443 445578899999 55 89999999887
No 127
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=37.47 E-value=17 Score=33.54 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=26.4
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 7 KQIPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 7 ~~~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+|+++++|.|+..|..|. .+|+.|+++ ||+|+++...
T Consensus 11 ~M~~~~~I~vIG~G~mG~-----~~A~~l~~~-G~~V~~~dr~ 47 (296)
T 3qha_A 11 HTTEQLKLGYIGLGNMGA-----PMATRMTEW-PGGVTVYDIR 47 (296)
T ss_dssp ----CCCEEEECCSTTHH-----HHHHHHTTS-TTCEEEECSS
T ss_pred cccCCCeEEEECcCHHHH-----HHHHHHHHC-CCeEEEEeCC
Confidence 333356899998877774 678999877 9999988543
No 128
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=37.26 E-value=1.1e+02 Score=27.20 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.+.++++++.++.| + -.++|++|+++ |++|.++...
T Consensus 23 ~~~k~vlITGas~g-I--G~~~a~~l~~~-G~~v~~~~~~ 58 (269)
T 3gk3_A 23 QAKRVAFVTGGMGG-L--GAAISRRLHDA-GMAVAVSHSE 58 (269)
T ss_dssp -CCCEEEETTTTSH-H--HHHHHHHHHTT-TCEEEEEECS
T ss_pred hcCCEEEEECCCch-H--HHHHHHHHHHC-CCEEEEEcCC
Confidence 34567888866543 2 36889999887 9999887643
No 129
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=36.69 E-value=26 Score=29.65 Aligned_cols=37 Identities=14% Similarity=0.093 Sum_probs=30.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+||++.-.|+.|=. =...+.+.|.++ |++|.++.++.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~ 39 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQH-FDEVNILFSPS 39 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTT-SSCEEEEECGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEchh
Confidence 46877777776655 679999999776 99999999886
No 130
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=36.50 E-value=31 Score=29.87 Aligned_cols=39 Identities=15% Similarity=0.178 Sum_probs=30.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHh-cCCCEEEEEeCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVH-QHNFLVTIFIPTI 50 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~-r~GH~Vt~~~~~~ 50 (487)
.++||++...|+.+ .+-...|.+.|.+ + |++|.++.++.
T Consensus 18 ~~k~IllgvTGsia-a~k~~~lv~~L~~~~-g~~V~vv~T~~ 57 (206)
T 1qzu_A 18 RKFHVLVGVTGSVA-ALKLPLLVSKLLDIP-GLEVAVVTTER 57 (206)
T ss_dssp SSEEEEEEECSSGG-GGTHHHHHHHHC----CEEEEEEECTG
T ss_pred CCCEEEEEEeChHH-HHHHHHHHHHHhccc-CCEEEEEECHh
Confidence 35788888888877 4456999999977 6 99999999986
No 131
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=36.49 E-value=33 Score=30.81 Aligned_cols=30 Identities=10% Similarity=-0.002 Sum_probs=24.2
Q ss_pred CceEEEeCCCcc------hHHHHHHHhCCCeEEEec
Q 011396 118 RLVALVVDIFGS------AAFDVANEFGVPVYIFFT 147 (487)
Q Consensus 118 ~pD~vI~D~~~~------~~~~~A~~lgIP~v~~~~ 147 (487)
+||+|++..... -++.+|++||+|.++...
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 799999776453 577899999999988654
No 132
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=36.37 E-value=35 Score=29.28 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=29.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
||++.-.|+.|-.. ...|.+.|.++.|++|.++.++.
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~ 38 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKW 38 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECch
Confidence 68888778876655 99999999653389999999876
No 133
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=35.20 E-value=1.1e+02 Score=29.70 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+++|+++..++ ...++++.|+++.|++++++.+..
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~~~ 58 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAPGN 58 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEECC
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECCC
Confidence 46899988763 356788888766688877776543
No 134
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=35.14 E-value=70 Score=24.06 Aligned_cols=34 Identities=29% Similarity=0.527 Sum_probs=29.2
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCC
Q 011396 281 VLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSP 318 (487)
Q Consensus 281 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 318 (487)
-|||-|.| .++.+.+++..+++.|.+++..+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 58888866 89999999999999999998887653
No 135
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=35.13 E-value=2.1e+02 Score=26.29 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=22.5
Q ss_pred HHHHhcC-CCceEEEeCCCcchH---HHHHHHhCCCeEEEec
Q 011396 110 LKVLAES-TRLVALVVDIFGSAA---FDVANEFGVPVYIFFT 147 (487)
Q Consensus 110 l~~~~~~-~~pD~vI~D~~~~~~---~~~A~~lgIP~v~~~~ 147 (487)
++.++.. +++|.||.-...... ...+...|||+|.+..
T Consensus 53 i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (350)
T 3h75_A 53 ARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNS 94 (350)
T ss_dssp HHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEES
T ss_pred HHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcC
Confidence 3444444 599988865422222 2345567999988654
No 136
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=34.99 E-value=2.1e+02 Score=24.88 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
+.+.++++.++.| =-.++|++|+++ |++|.++..
T Consensus 12 ~~k~vlITGas~g---iG~~ia~~l~~~-G~~v~~~~~ 45 (256)
T 3ezl_A 12 SQRIAYVTGGMGG---IGTSICQRLHKD-GFRVVAGCG 45 (256)
T ss_dssp -CEEEEETTTTSH---HHHHHHHHHHHT-TEEEEEEEC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHC-CCEEEEEeC
Confidence 4567778766553 246899999888 999988773
No 137
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=34.83 E-value=2.4e+02 Score=25.00 Aligned_cols=29 Identities=14% Similarity=0.383 Sum_probs=19.5
Q ss_pred CceEEEeCCCcch----HHHHHHHhCCCeEEEe
Q 011396 118 RLVALVVDIFGSA----AFDVANEFGVPVYIFF 146 (487)
Q Consensus 118 ~pD~vI~D~~~~~----~~~~A~~lgIP~v~~~ 146 (487)
++|.||....... ....+...|||+|.+.
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 61 NPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 8998887654332 3345566799988754
No 138
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=33.74 E-value=1.2e+02 Score=26.95 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
+.++++++.++.| + -.++|++|+++ |++|.+...
T Consensus 25 ~~k~vlITGas~g-I--G~a~a~~l~~~-G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTGGSRG-I--GAAVCRLAARQ-GWRVGVNYA 58 (272)
T ss_dssp CSCEEEETTTTSH-H--HHHHHHHHHHT-TCEEEEEES
T ss_pred CCCEEEEECCCch-H--HHHHHHHHHHC-CCEEEEEcC
Confidence 3457778755543 2 46899999888 999988744
No 139
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=33.73 E-value=77 Score=29.99 Aligned_cols=37 Identities=5% Similarity=-0.016 Sum_probs=32.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-+++...++.|-..=.+.++..++++ |..|.|+..+.
T Consensus 65 ii~I~G~pGsGKTtLal~la~~~~~~-g~~vlyid~E~ 101 (356)
T 1u94_A 65 IVEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEH 101 (356)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 46777888999999999999999877 99999999875
No 140
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=33.67 E-value=42 Score=31.26 Aligned_cols=32 Identities=19% Similarity=0.054 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFI 47 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~ 47 (487)
++||.|+..++.| |-.+|+.|.++ ||+|+..=
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~-G~~V~~~D 35 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEA-GFEVSGCD 35 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHT-TCEEEEEE
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhC-CCEEEEEc
Confidence 5689999999988 55799999887 99999864
No 141
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=33.64 E-value=25 Score=27.96 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+.||+++..|..| ..+|+.|.++ ||+|+++-...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHT-TCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHC-CCCEEEEECCH
Confidence 5689999876555 4789999887 99999997654
No 142
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=33.52 E-value=41 Score=27.50 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=27.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.+++++..|. | +.|++++++.|.++ |.+|+++ ...
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~-~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEI-GNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHH-TCEEEEE-EEC
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhc-CCcEEEE-EeC
Confidence 4688877444 4 99999999999887 8899998 543
No 143
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=33.50 E-value=30 Score=32.56 Aligned_cols=35 Identities=20% Similarity=0.111 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
|++++|.++..|..|. .+|..|.+. ||+|+++...
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~-g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALK-GQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECSC
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhC-CCEEEEEeCC
Confidence 3456899998766663 468888777 9999988643
No 144
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=33.19 E-value=38 Score=32.09 Aligned_cols=37 Identities=22% Similarity=0.325 Sum_probs=24.3
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCC
Q 011396 280 SVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSP 318 (487)
Q Consensus 280 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 318 (487)
.+|+.+.||.... .-...++++|++.+.+|.|+....
T Consensus 4 ~i~i~~GGTgGHi--~palala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 4 NVLIMAGGTGGHV--FPALACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp EEEEECCSSHHHH--HHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cEEEEcCCCHHHH--HHHHHHHHHHHhCCCEEEEEECCc
Confidence 3666666674221 113457888989999999886543
No 145
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=33.06 E-value=55 Score=26.33 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=29.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 14 VAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 14 Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++++..+..-.+++.+.+|...++. |++|+++.+..
T Consensus 11 ~II~~sg~~d~~~~a~~lA~~Aaa~-g~eV~iF~t~~ 46 (144)
T 2qs7_A 11 SIIVFSGTIDKLMPVGILTSGAAAS-GYEVNLFFTFW 46 (144)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHHT-TCEEEEEECHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHc-CCcEEEEEehH
Confidence 4555556678889999999998887 99999998865
No 146
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=32.72 E-value=29 Score=27.20 Aligned_cols=31 Identities=19% Similarity=0.285 Sum_probs=20.6
Q ss_pred cCCCceEEEeCCCcch--HHHHH---HHhCCCeEEE
Q 011396 115 ESTRLVALVVDIFGSA--AFDVA---NEFGVPVYIF 145 (487)
Q Consensus 115 ~~~~pD~vI~D~~~~~--~~~~A---~~lgIP~v~~ 145 (487)
++.+||+||.|..++. +..++ +..++|++++
T Consensus 50 ~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 50 RKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 3459999999987664 33333 3458896653
No 147
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=32.33 E-value=41 Score=30.51 Aligned_cols=32 Identities=22% Similarity=0.206 Sum_probs=22.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
|||++. |+.|-+- -.|+++|.++ ||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~-G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNAR-GHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHC-CCEEEEEEC
Confidence 356655 4555553 4578999888 999999874
No 148
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=32.07 E-value=82 Score=35.40 Aligned_cols=38 Identities=18% Similarity=0.154 Sum_probs=25.6
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 7 KQIPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 7 ~~~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.++++++|+++..+.. .+.+++++.+. |++++.+.+..
T Consensus 27 ~~~m~kkILI~grGei-----a~~iiraar~l-Gi~vVaV~s~~ 64 (1236)
T 3va7_A 27 KKKPFETVLIANRGEI-----AVRIMKTLKRM-GIKSVAVYSDP 64 (1236)
T ss_dssp -CCSCSEEEECCCHHH-----HHHHHHHHHHH-TCEEEEEECSG
T ss_pred ccCCCCEEEEEcCCHH-----HHHHHHHHHHC-CCEEEEEEcCC
Confidence 3334567888764422 57888898776 99988876554
No 149
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=31.93 E-value=1.6e+02 Score=26.23 Aligned_cols=34 Identities=21% Similarity=0.081 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.++++++.++.| =-.++|+.|+++ |++|.++.-.
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~-G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHAD-GLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHT-TCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHC-CCEEEEEeCC
Confidence 467778866654 246899999887 9999887643
No 150
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=31.88 E-value=1.4e+02 Score=25.68 Aligned_cols=38 Identities=8% Similarity=-0.042 Sum_probs=29.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-+++...|+.|-..=.+.+|...+.+.|..|.|++.+.
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~ 69 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEE 69 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccC
Confidence 46788889999999999988664333278899998775
No 151
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=31.85 E-value=31 Score=34.48 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
..++||+++..+.-| +.+|+.|.++ |++||++....
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~-~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTK-KYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTT-TCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhC-CCcEEEECCCC
Confidence 346799999866445 5789999665 99999997654
No 152
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=31.85 E-value=26 Score=27.77 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++||+++..| .+ -..+|+.|.++ ||+|+++-...
T Consensus 6 ~~~v~I~G~G---~i--G~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSE---AA--GVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCS---HH--HHHHHHHHHHT-TCCEEEEESCH
T ss_pred CCEEEEECCC---HH--HHHHHHHHHHC-CCeEEEEECCH
Confidence 4578888653 33 35789999887 99999887543
No 153
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=31.48 E-value=3.5e+02 Score=27.89 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=22.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+++|++. |+.|-+ -.+|+++|+++ ||+|+.+.-.
T Consensus 11 ~~~ilVT--GatG~I--G~~l~~~L~~~-G~~V~~~~r~ 44 (699)
T 1z45_A 11 SKIVLVT--GGAGYI--GSHTVVELIEN-GYDCVVADNL 44 (699)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHT-TCEEEEEECC
T ss_pred CCEEEEE--CCCCHH--HHHHHHHHHHC-cCEEEEEECC
Confidence 4555554 334433 25688999887 9999988643
No 154
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=31.38 E-value=3.1e+02 Score=25.38 Aligned_cols=38 Identities=5% Similarity=0.013 Sum_probs=26.7
Q ss_pred cEEEEEcCCCcc--C--HHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIG--H--LIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~G--H--~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.-|++.|..+.. . ..-+..|++.|.++ |++|.++..+.
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-g~~vvl~g~~~ 227 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRL-GYKTVFFGGPM 227 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-TCEEEECCCTT
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-CCeEEEEeCcc
Confidence 456777755432 2 34599999999888 99998866543
No 155
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=31.38 E-value=98 Score=27.01 Aligned_cols=37 Identities=19% Similarity=0.301 Sum_probs=30.1
Q ss_pred EEEEEcCC-CccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTP-GIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~-~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.+.+++.+ +.|=..=++.++..+..+ |.+|.++.+..
T Consensus 13 ~i~litG~mGsGKTT~ll~~~~r~~~~-g~kVli~~~~~ 50 (223)
T 2b8t_A 13 WIEFITGPMFAGKTAELIRRLHRLEYA-DVKYLVFKPKI 50 (223)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHHHT-TCCEEEEEECC
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhc-CCEEEEEEecc
Confidence 35555544 899999999999999887 99999987665
No 156
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=31.27 E-value=33 Score=32.63 Aligned_cols=29 Identities=31% Similarity=0.356 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEE
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIF 46 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~ 46 (487)
+||+++..|-.| +.+|..|+++ ||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhC-CCCEEEE
Confidence 589999766556 7889999887 9999998
No 157
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=31.19 E-value=34 Score=32.47 Aligned_cols=42 Identities=14% Similarity=0.057 Sum_probs=25.6
Q ss_pred CcccCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 1 METQNSKQIPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 1 ~~~~~~~~~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
|.+...+.+++.+|+++..|-.| +.+|..|+++ |++|+++-.
T Consensus 1 m~~~~~~~m~~~dVvIVGaG~aG-----l~~A~~L~~~-G~~v~viE~ 42 (379)
T 3alj_A 1 MANVNKTPGKTRRAEVAGGGFAG-----LTAAIALKQN-GWDVRLHEK 42 (379)
T ss_dssp ----------CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred CCCccCCCCCCCeEEEECCCHHH-----HHHHHHHHHC-CCCEEEEec
Confidence 33333333445689998866555 7788899887 999999854
No 158
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=31.17 E-value=1.8e+02 Score=25.72 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.+.++++.++.| =-.++|++|+++ |++|.++...
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~-G~~V~~~~r~ 62 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASM-GLKVWINYRS 62 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHC-CCEEEEEeCC
Confidence 457777766554 346899999888 9999888753
No 159
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=30.96 E-value=2.3e+02 Score=26.96 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+|+++..++ .+.++++.|+++.|++++++.+.
T Consensus 2 kililG~g~-----r~~a~a~~l~~~~g~~~v~~~~~ 33 (417)
T 2ip4_A 2 KVLVVGSGG-----REHALLWKAAQSPRVKRLYAAPG 33 (417)
T ss_dssp EEEEEESSH-----HHHHHHHHHHTCSSCCEEEEEEC
T ss_pred EEEEECCCH-----HHHHHHHHHHhCCCCCEEEEECC
Confidence 688887663 47889999977668888777653
No 160
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=30.55 E-value=48 Score=30.10 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+.++++++.++.| =-.++|+.|+++ |++|.++.-.
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~-G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSN-GIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHT-TCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHC-CCEEEEEeCC
Confidence 4567888866654 245889999887 9999888744
No 161
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=30.20 E-value=81 Score=23.68 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=22.2
Q ss_pred cCCCceEEEeCCCcch--HHHHHHHh-------CCCeEEEecc
Q 011396 115 ESTRLVALVVDIFGSA--AFDVANEF-------GVPVYIFFTT 148 (487)
Q Consensus 115 ~~~~pD~vI~D~~~~~--~~~~A~~l-------gIP~v~~~~~ 148 (487)
++.+||+||.|...+. +..+++.+ ++|+++++..
T Consensus 43 ~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 43 SEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp TTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 4458999999976653 44444433 5887776553
No 162
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=29.86 E-value=1.7e+02 Score=25.87 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
.++++++.++.| =-.++|++|+++ |++|.+...
T Consensus 27 ~k~~lVTGas~G---IG~aia~~la~~-G~~Vv~~~~ 59 (267)
T 3u5t_A 27 NKVAIVTGASRG---IGAAIAARLASD-GFTVVINYA 59 (267)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHH-TCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHC-CCEEEEEcC
Confidence 457777765543 246899999988 999988754
No 163
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=29.74 E-value=1.8e+02 Score=25.13 Aligned_cols=37 Identities=5% Similarity=0.012 Sum_probs=21.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++||+++..+..+.+ .+|.++..+..+++|..+.+..
T Consensus 5 ~~riavl~SG~Gsnl---~all~~~~~~~~~eI~~Vis~~ 41 (215)
T 3tqr_A 5 PLPIVVLISGNGTNL---QAIIGAIQKGLAIEIRAVISNR 41 (215)
T ss_dssp CEEEEEEESSCCHHH---HHHHHHHHTTCSEEEEEEEESC
T ss_pred CcEEEEEEeCCcHHH---HHHHHHHHcCCCCEEEEEEeCC
Confidence 568887776654444 3444554221258999888753
No 164
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=29.69 E-value=2.9e+02 Score=24.29 Aligned_cols=38 Identities=5% Similarity=-0.008 Sum_probs=26.4
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHL-IPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~-~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+||+++-..+.-++ ..+...++.+.. .|.+|.+++.+.
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~-p~~~i~~~t~~~ 40 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAA-PGTEILAVCPRA 40 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCC-TTEEEEEECCSS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcC-CCCEEEEEeCCC
Confidence 46877776776666 466678888754 388888877654
No 165
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=29.58 E-value=98 Score=29.73 Aligned_cols=32 Identities=16% Similarity=0.142 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+|+++..++ .+++++..|+++.|+++.++.+.
T Consensus 2 ~ililG~g~-----r~~~~a~~~~~~~g~~~v~~~~~ 33 (422)
T 2xcl_A 2 NVLIIGKGG-----REHTLAWKAAQSSLVENVFAAPG 33 (422)
T ss_dssp EEEEEECSH-----HHHHHHHHHTTCTTCSEEEEEEC
T ss_pred EEEEECCCH-----HHHHHHHHHHhCCCCCEEEEeCC
Confidence 688887663 47789999977668888887654
No 166
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=29.36 E-value=2.4e+02 Score=25.23 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.++++++.++.| + -.++|++|+++ |++|.++.-.
T Consensus 16 gk~vlVTGas~g-I--G~~~a~~L~~~-G~~V~~~~r~ 49 (291)
T 3rd5_A 16 QRTVVITGANSG-L--GAVTARELARR-GATVIMAVRD 49 (291)
T ss_dssp TCEEEEECCSSH-H--HHHHHHHHHHT-TCEEEEEESC
T ss_pred CCEEEEeCCCCh-H--HHHHHHHHHHC-CCEEEEEECC
Confidence 356677755542 2 36899999888 9999988754
No 167
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=29.14 E-value=1.8e+02 Score=25.47 Aligned_cols=33 Identities=21% Similarity=0.104 Sum_probs=24.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++++.++.| =-.++|+.|+++ |++|.++.-.
T Consensus 8 k~vlVTGas~G---IG~aia~~l~~~-G~~V~~~~r~ 40 (252)
T 3h7a_A 8 ATVAVIGAGDY---IGAEIAKKFAAE-GFTVFAGRRN 40 (252)
T ss_dssp CEEEEECCSSH---HHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCCch---HHHHHHHHHHHC-CCEEEEEeCC
Confidence 46777755543 246899999888 9999887643
No 168
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=28.89 E-value=4.4e+02 Score=26.19 Aligned_cols=34 Identities=12% Similarity=-0.103 Sum_probs=22.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.++|++.. .-.-.+.|++.|.+- |.+|..+.+..
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~el-Gm~vv~v~~~~ 397 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLEL-GCEPVHILCHN 397 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHc-CCEEEEEEeCC
Confidence 35677762 334456777777654 99988887653
No 169
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=28.88 E-value=72 Score=26.47 Aligned_cols=48 Identities=25% Similarity=0.216 Sum_probs=28.9
Q ss_pred HHhHHHHHHHHHHHhcCCCceEEEeCCCcch---------------HHHHHHHhCCCeEEEecchHH
Q 011396 100 ARSLSSLRDALKVLAESTRLVALVVDIFGSA---------------AFDVANEFGVPVYIFFTTTAM 151 (487)
Q Consensus 100 ~~~~~~~~~~l~~~~~~~~pD~vI~D~~~~~---------------~~~~A~~lgIP~v~~~~~~~~ 151 (487)
......+.+.+++. +||.+.....++. +..++...|||+..+.|....
T Consensus 49 ~~I~~~l~~~i~~~----~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~~vK 111 (166)
T 4ep4_A 49 GRIHARVLEVLHRF----RPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPMQVK 111 (166)
T ss_dssp HHHHHHHHHHHHHH----CCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHHHHH
T ss_pred HHHHHHHHHHHHHh----CCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHHH
Confidence 33344455555544 9998776543421 124677889998887765443
No 170
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=28.81 E-value=2e+02 Score=24.98 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
+.++++.++.| =-.++|+.|+++ |++|.+...
T Consensus 5 k~~lVTGas~g---IG~~ia~~l~~~-G~~V~~~~~ 36 (246)
T 3osu_A 5 KSALVTGASRG---IGRSIALQLAEE-GYNVAVNYA 36 (246)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHC-CCEEEEEeC
Confidence 46777755542 236889999888 999988764
No 171
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=28.77 E-value=53 Score=28.20 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
|++|++. |+.|.+- ..|+++|.++ ||+|+.+.-.
T Consensus 4 m~~ilIt--GatG~iG--~~l~~~L~~~-g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGFVG--SALLNEALNR-GFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHHHH--HHHHHHHHTT-TCEEEEECSC
T ss_pred CCEEEEE--cCCchHH--HHHHHHHHHC-CCEEEEEEcC
Confidence 4566665 4445443 5788999887 9999998754
No 172
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=28.74 E-value=38 Score=29.62 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=31.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+|+|..-|+-|=..=...||..|+++ |++|.++=.+.
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASD-YDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTT-CSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 58888888889999999999999887 99999886554
No 173
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=28.68 E-value=2.8e+02 Score=24.66 Aligned_cols=34 Identities=18% Similarity=0.140 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.++++++.++.| =-.++|+.|+++ |++|.++.-.
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~-G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKN-GAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHC-CCEEEEEeCC
Confidence 457777766553 246889999888 9999887643
No 174
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=28.63 E-value=66 Score=29.56 Aligned_cols=26 Identities=12% Similarity=0.045 Sum_probs=22.7
Q ss_pred cccccccchhHHHHHh------hCCceecccc
Q 011396 372 GFLSHCGWNSILESIV------HGVPIIAWPL 397 (487)
Q Consensus 372 ~~I~HGG~gt~~eal~------~GvP~l~~P~ 397 (487)
++|.-||-||++|.+. .++|+-++|.
T Consensus 66 ~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 66 LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 8999999999999864 5689999996
No 175
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=28.44 E-value=85 Score=30.52 Aligned_cols=33 Identities=3% Similarity=0.040 Sum_probs=23.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+++|+++.. | .-.+.+++++.+. |++|+.+.+.
T Consensus 2 ~k~ilI~g~---g--~~~~~~~~a~~~~-G~~vv~v~~~ 34 (449)
T 2w70_A 2 LDKIVIANR---G--EIALRILRACKEL-GIKTVAVHSS 34 (449)
T ss_dssp CSEEEECCC---H--HHHHHHHHHHHHH-TCEEEEEEEG
T ss_pred CceEEEeCC---c--HHHHHHHHHHHHc-CCeEEEEecc
Confidence 346887763 3 2456788999777 9999988653
No 176
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=28.34 E-value=1e+02 Score=27.45 Aligned_cols=39 Identities=15% Similarity=0.103 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCc----------c-CHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGI----------G-HLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~----------G-H~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
|++|+++..... | ...=++.-...|.+. |++|+++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~a-G~~V~~aSp~g 58 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAA-GFEVDVASETG 58 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 468888776532 1 144477777888676 99999999754
No 177
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=28.11 E-value=63 Score=25.99 Aligned_cols=35 Identities=9% Similarity=0.032 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
...+|+++..|..| ..+++.|.++ |++|+++....
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEESCG
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhC-CCeEEEEECCH
Confidence 35689888654444 5578899777 99999987543
No 178
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=27.82 E-value=42 Score=29.27 Aligned_cols=26 Identities=27% Similarity=0.262 Sum_probs=19.8
Q ss_pred CcEEEEEcCCCccC--HHHHHHHHHHHH
Q 011396 11 RAHVAMVPTPGIGH--LIPQVELAKRLV 36 (487)
Q Consensus 11 ~~~Il~~~~~~~GH--~~P~l~LA~~L~ 36 (487)
|++|++..|+-+|. +||...++++|.
T Consensus 1 m~~VLvTGF~PF~~~~~NPS~~~v~~L~ 28 (215)
T 3lac_A 1 MKTVLLTGFDPFGGESINPAWEVAKSLH 28 (215)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHTTT
T ss_pred CCEEEEEecCCCCCCCCChHHHHHHHhc
Confidence 35788877766543 699999999994
No 179
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=27.70 E-value=47 Score=28.93 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=22.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCC-CEEEEEeCC
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHN-FLVTIFIPT 49 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~G-H~Vt~~~~~ 49 (487)
++|++|++ + |+.|-+ -.+|+++|+++ | |+|+.+.-.
T Consensus 21 ~~mk~vlV-t-GatG~i--G~~l~~~L~~~-G~~~V~~~~R~ 57 (236)
T 3qvo_A 21 GHMKNVLI-L-GAGGQI--ARHVINQLADK-QTIKQTLFARQ 57 (236)
T ss_dssp -CCEEEEE-E-TTTSHH--HHHHHHHHTTC-TTEEEEEEESS
T ss_pred CcccEEEE-E-eCCcHH--HHHHHHHHHhC-CCceEEEEEcC
Confidence 43445544 4 333333 35789999887 9 999988754
No 180
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=27.60 E-value=40 Score=31.34 Aligned_cols=36 Identities=11% Similarity=0.003 Sum_probs=26.6
Q ss_pred EEEEcCCCccCH--------------HHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 14 VAMVPTPGIGHL--------------IPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 14 Il~~~~~~~GH~--------------~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
|++..+|++=.+ .--.+||+++.++ |++||+++.+.
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~-Ga~V~lv~g~~ 89 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAA-GYGVLFLYRAR 89 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHC-CCEEEEEecCC
Confidence 666666664444 1456889999888 99999999764
No 181
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=27.54 E-value=2.8e+02 Score=25.16 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=63.9
Q ss_pred HHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCcccccccccccccccc
Q 011396 297 LNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~H 376 (487)
-.++++.++..+.++++..+... -+|+.|.+..+..-+=+ |++ +.=..
T Consensus 154 ~~~~~~~l~~~~~Dlivlagym~-------------------il~~~~l~~~~~~~iNi-----------HpS--lLP~~ 201 (287)
T 3nrb_A 154 ESQIKNIVTQSQADLIVLARYMQ-------------------ILSDDLSAFLSGRCINI-----------HHS--FLPGF 201 (287)
T ss_dssp HHHHHHHHHHHTCSEEEESSCCS-------------------CCCHHHHHHHTTSEEEE-----------ESS--CTTTT
T ss_pred HHHHHHHHHHhCCCEEEhhhhhh-------------------hcCHHHHhhccCCeEEE-----------Ccc--cccCC
Confidence 34577888888888888777642 36777766554322222 233 33335
Q ss_pred ccchhHHHHHhhCCceecccccc--ccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhc
Q 011396 377 CGWNSILESIVHGVPIIAWPLYA--EQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 377 GG~gt~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 439 (487)
.|++....|+.+|+....+-.+. +..+-+..+.+ . -+.+... -|.++|.+.+.++-
T Consensus 202 rG~~p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q-~--~v~i~~~----dt~~~L~~r~~~~e 259 (287)
T 3nrb_A 202 KGAKPYHQAHTRGVKLIGATAHFVTADLDEGPIIAQ-D--VEHVSHR----DSAEDLVRKGRDIE 259 (287)
T ss_dssp CSSCHHHHHHHHTCSEEEEEEEECCSSSSCCCEEEE-E--EEECCTT----CCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEE-E--EEecCCC----CCHHHHHHHHHHHH
Confidence 69999999999999987766543 33333333333 1 1223333 48888888777664
No 182
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=27.51 E-value=3.1e+02 Score=23.93 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
++++++.++.| + -.++|+.|+++ |++|.++..
T Consensus 9 k~vlVTGas~G-I--G~aia~~la~~-G~~V~~~~~ 40 (259)
T 3edm_A 9 RTIVVAGAGRD-I--GRACAIRFAQE-GANVVLTYN 40 (259)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHT-TCEEEEEEC
T ss_pred CEEEEECCCch-H--HHHHHHHHHHC-CCEEEEEcC
Confidence 46777766553 2 36899999888 999988744
No 183
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=27.47 E-value=25 Score=32.64 Aligned_cols=32 Identities=16% Similarity=0.142 Sum_probs=24.0
Q ss_pred cccccccccccccccchhHHHHHhh----CCceecccc
Q 011396 364 VLRHGSTGGFLSHCGWNSILESIVH----GVPIIAWPL 397 (487)
Q Consensus 364 ~L~~~~~~~~I~HGG~gt~~eal~~----GvP~l~~P~ 397 (487)
....++ ++|.-||-||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d--~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCE--LVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CC--CEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCC--EEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 334456 99999999999999865 889888873
No 184
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=27.41 E-value=3.1e+02 Score=24.36 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++++.++.| =-.++|+.|+++ |++|.++.-.
T Consensus 6 k~~lVTGas~G---IG~aia~~la~~-G~~V~~~~r~ 38 (281)
T 3zv4_A 6 EVALITGGASG---LGRALVDRFVAE-GARVAVLDKS 38 (281)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCcH---HHHHHHHHHHHC-cCEEEEEeCC
Confidence 46777766543 246889999888 9999887643
No 185
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=27.36 E-value=2.8e+02 Score=24.40 Aligned_cols=34 Identities=18% Similarity=0.117 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.++++++.++.| =-.++|+.|+++ |++|.+....
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~-G~~V~~~~r~ 60 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQ-GAIVGLHGTR 60 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHT-TCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHC-CCEEEEEeCC
Confidence 357778766553 246889999888 9999887644
No 186
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=27.36 E-value=1.3e+02 Score=28.22 Aligned_cols=37 Identities=3% Similarity=-0.046 Sum_probs=32.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-++++..++.|-..=++.++..+++. |..|.|+..+.
T Consensus 63 iv~I~G~pGsGKTtLal~la~~~~~~-g~~vlyi~~E~ 99 (349)
T 2zr9_A 63 VIEIYGPESSGKTTVALHAVANAQAA-GGIAAFIDAEH 99 (349)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhC-CCeEEEEECCC
Confidence 46777889999999999999998777 99999999875
No 187
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=27.35 E-value=2.7e+02 Score=23.13 Aligned_cols=37 Identities=5% Similarity=-0.058 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCC--CEEEEEeC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHN--FLVTIFIP 48 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~G--H~Vt~~~~ 48 (487)
+.++|.++. ++.+++--+-..++.|.+- | |+|.+++.
T Consensus 11 ~~P~V~Iim-GS~SD~~v~~~a~~~l~~~-gi~~ev~V~sa 49 (173)
T 4grd_A 11 SAPLVGVLM-GSSSDWDVMKHAVAILQEF-GVPYEAKVVSA 49 (173)
T ss_dssp SSCSEEEEE-SSGGGHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CCCeEEEEe-CcHhHHHHHHHHHHHHHHc-CCCEEEEEEcc
Confidence 356688877 8899999999999999665 7 55555443
No 188
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=27.25 E-value=3.3e+02 Score=24.15 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++++.++.| + -.++|+.|+++ |++|.++.-.
T Consensus 30 k~vlVTGas~g-I--G~aia~~la~~-G~~V~~~~r~ 62 (277)
T 3gvc_A 30 KVAIVTGAGAG-I--GLAVARRLADE-GCHVLCADID 62 (277)
T ss_dssp CEEEETTTTST-H--HHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHC-CCEEEEEeCC
Confidence 57777755543 3 35789999888 9999887643
No 189
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=27.23 E-value=27 Score=32.05 Aligned_cols=28 Identities=11% Similarity=0.073 Sum_probs=23.6
Q ss_pred ccccccccccccchhHHHHHhh----CCceeccc
Q 011396 367 HGSTGGFLSHCGWNSILESIVH----GVPIIAWP 396 (487)
Q Consensus 367 ~~~~~~~I~HGG~gt~~eal~~----GvP~l~~P 396 (487)
.++ ++|.=||-||+.+++.. ++|.+.++
T Consensus 63 ~~D--~vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 63 QAD--LAVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp HCS--EEEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCC--EEEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 345 99999999999999853 78888887
No 190
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=27.18 E-value=3.6e+02 Score=24.63 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCcccccccccccccc
Q 011396 295 EQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFL 374 (487)
Q Consensus 295 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I 374 (487)
+.-.++++.++..+.++++..+... -+|+.|.+..+..-+=+ |++ +.=
T Consensus 168 ~~~~~~~~~l~~~~~DliVlagym~-------------------IL~~~~l~~~~~~~INi-----------HpS--lLP 215 (302)
T 3o1l_A 168 PAFAEVSRLVGHHQADVVVLARYMQ-------------------ILPPQLCREYAHQVINI-----------HHS--FLP 215 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCCS-------------------CCCTTHHHHTTTCEEEE-----------ESS--CTT
T ss_pred HHHHHHHHHHHHhCCCEEEHhHhhh-------------------hcCHHHHhhhhCCeEEe-----------Ccc--ccc
Confidence 3445677778888888887776642 36676665544321211 233 333
Q ss_pred ccccchhHHHHHhhCCceecccccc--ccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhc
Q 011396 375 SHCGWNSILESIVHGVPIIAWPLYA--EQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 375 ~HGG~gt~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 439 (487)
...|++....|+.+|+....+-.+. +..+-+..+.+ . -+.+... -|.++|.+.+.++-
T Consensus 216 ~frG~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q-~--~v~I~~~----dt~~~L~~r~~~~e 275 (302)
T 3o1l_A 216 SFVGAKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQ-D--VVRVSHR----DSIENMVRFGRDVE 275 (302)
T ss_dssp SSCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEEE-E--EEecCCC----CCHHHHHHHHHHHH
Confidence 3568999999999999987766543 33344433333 1 1223333 48888888777654
No 191
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=27.16 E-value=93 Score=25.70 Aligned_cols=39 Identities=8% Similarity=-0.072 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCCceEEEeCCCcch---HHHHHHHhCCCeEEEec
Q 011396 107 RDALKVLAESTRLVALVVDIFGSA---AFDVANEFGVPVYIFFT 147 (487)
Q Consensus 107 ~~~l~~~~~~~~pD~vI~D~~~~~---~~~~A~~lgIP~v~~~~ 147 (487)
.+.|.++++ +||+|+....... ++.+|.+||+|.++...
T Consensus 60 a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~ 101 (166)
T 3fet_A 60 SEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTATEIF 101 (166)
T ss_dssp HHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCceeeEE
Confidence 344555555 8999998763332 55799999999988544
No 192
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=26.90 E-value=83 Score=28.89 Aligned_cols=38 Identities=16% Similarity=0.057 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCccC----HHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGH----LIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH----~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+++|+++..+..+- +.-...++++|.+. ||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~-g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDA-GIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT-TCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 56888888654432 34678899999777 9999998754
No 193
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=26.82 E-value=3e+02 Score=23.93 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++++.++.| + -.++|+.|+++ |++|.++.-.
T Consensus 8 k~~lVTGas~g-I--G~aia~~l~~~-G~~V~~~~r~ 40 (257)
T 3tpc_A 8 RVFIVTGASSG-L--GAAVTRMLAQE-GATVLGLDLK 40 (257)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEeCCCCH-H--HHHHHHHHHHC-CCEEEEEeCC
Confidence 57777755543 2 46899999888 9999887643
No 194
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=26.79 E-value=1.1e+02 Score=27.08 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.+.++++.++.| + -.++|++|+++ |++|.++...
T Consensus 7 ~k~vlVTGas~g-I--G~~~a~~l~~~-G~~v~~~~~~ 40 (264)
T 3i4f_A 7 VRHALITAGTKG-L--GKQVTEKLLAK-GYSVTVTYHS 40 (264)
T ss_dssp CCEEEETTTTSH-H--HHHHHHHHHHT-TCEEEEEESS
T ss_pred cCEEEEeCCCch-h--HHHHHHHHHHC-CCEEEEEcCC
Confidence 356777755542 2 36899999888 9999987543
No 195
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=26.78 E-value=1.7e+02 Score=34.13 Aligned_cols=37 Identities=5% Similarity=-0.016 Sum_probs=33.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
-+++...|+.|-..=.+.++...+++ |..|.|++.+.
T Consensus 385 lilI~G~pGsGKTtLaLq~a~~~~~~-G~~vlyis~E~ 421 (1706)
T 3cmw_A 385 IVEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEH 421 (1706)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEECTTS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHh-CCCeEEEEccC
Confidence 47788889999999999999999887 99999999886
No 196
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=26.77 E-value=1.5e+02 Score=23.11 Aligned_cols=48 Identities=13% Similarity=-0.002 Sum_probs=33.4
Q ss_pred hCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccC
Q 011396 388 HGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQG 441 (487)
Q Consensus 388 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 441 (487)
..+|+|++--..+ ........+ .|+--.+.+. ++.++|..+|+.++..
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~kP----~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAKP----FAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEESS----CCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeCC----CCHHHHHHHHHHHHHH
Confidence 4788888765443 334455555 6766566554 7999999999999865
No 197
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=26.63 E-value=74 Score=27.67 Aligned_cols=26 Identities=15% Similarity=0.217 Sum_probs=19.6
Q ss_pred CcEEEEEcCCCcc--CHHHHHHHHHHHH
Q 011396 11 RAHVAMVPTPGIG--HLIPQVELAKRLV 36 (487)
Q Consensus 11 ~~~Il~~~~~~~G--H~~P~l~LA~~L~ 36 (487)
.++|++..|+-+| .+||...++++|.
T Consensus 3 ~m~VLvTGF~PF~~~~~NPS~~~v~~L~ 30 (215)
T 3giu_A 3 AMHILVTGFAPFDNQNINPSWEAVTQLE 30 (215)
T ss_dssp -CEEEEEEECCCTTCSCCHHHHHHHHSC
T ss_pred CcEEEEEecCCCCCCCCChHHHHHHHhc
Confidence 3578888776654 4699999999993
No 198
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=26.55 E-value=2.2e+02 Score=25.01 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
++++++.++.| + -.++|+.|+++ |++|.+...
T Consensus 5 k~vlVTGas~g-I--G~aia~~l~~~-G~~vv~~~~ 36 (258)
T 3oid_A 5 KCALVTGSSRG-V--GKAAAIRLAEN-GYNIVINYA 36 (258)
T ss_dssp CEEEESSCSSH-H--HHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEecCCch-H--HHHHHHHHHHC-CCEEEEEcC
Confidence 46777755542 2 46789999888 999998643
No 199
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=26.51 E-value=1.3e+02 Score=29.03 Aligned_cols=32 Identities=9% Similarity=0.118 Sum_probs=21.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCC-EEEEEeC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNF-LVTIFIP 48 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH-~Vt~~~~ 48 (487)
+++|+++..+++- .+||+.|.+. +. .-.++.+
T Consensus 3 ~mkvlviG~ggre-----~ala~~l~~s-~~v~~v~~~p 35 (431)
T 3mjf_A 3 AMNILIIGNGGRE-----HALGWKAAQS-PLADKIYVAP 35 (431)
T ss_dssp CEEEEEEECSHHH-----HHHHHHHTTC-TTEEEEEEEE
T ss_pred CcEEEEECCCHHH-----HHHHHHHHhC-CCCCEEEEEC
Confidence 4689999877654 4689999776 54 3344444
No 200
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=26.31 E-value=96 Score=28.20 Aligned_cols=43 Identities=12% Similarity=-0.016 Sum_probs=21.8
Q ss_pred cCCCCCCCcEEEEEcCCCccCHHHHH--HHHHHHHhcCCCEEEEEe
Q 011396 4 QNSKQIPRAHVAMVPTPGIGHLIPQV--ELAKRLVHQHNFLVTIFI 47 (487)
Q Consensus 4 ~~~~~~~~~~Il~~~~~~~GH~~P~l--~LA~~L~~r~GH~Vt~~~ 47 (487)
+..-|.+|+.+++...|-..-.+-.+ ...+.|.+. ||+|++.-
T Consensus 16 ~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~-G~eV~v~D 60 (280)
T 4gi5_A 16 ENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQA-GHEVQVSD 60 (280)
T ss_dssp ------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHC-CCeEEEEE
Confidence 33334444444555556544444322 355667666 99999874
No 201
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=26.20 E-value=2.7e+02 Score=22.79 Aligned_cols=137 Identities=12% Similarity=0.125 Sum_probs=71.5
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccC
Q 011396 280 SVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWS 359 (487)
Q Consensus 280 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 359 (487)
+.|-|-+||. .+....++....|+..+.++-.-+-+.++ .|+.+. .|+
T Consensus 3 ~~V~Iimgs~--SD~~v~~~a~~~l~~~gi~~ev~V~saHR-------------------~p~~~~-----------~~~ 50 (159)
T 3rg8_A 3 PLVIILMGSS--SDMGHAEKIASELKTFGIEYAIRIGSAHK-------------------TAEHVV-----------SML 50 (159)
T ss_dssp CEEEEEESSG--GGHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------CHHHHH-----------HHH
T ss_pred CeEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEcccC-------------------CHHHHH-----------HHH
Confidence 3566667773 34566778888888888876655555443 344332 111
Q ss_pred Cccccccccccccccccccch----hHHHHHhhCCceecccccc---ccchhhHhhhhhc--cceEEeeecCCCCcCHHH
Q 011396 360 PQVQVLRHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYA---EQKMNAVLLIDDL--KVSFRVKVNENGLVGRED 430 (487)
Q Consensus 360 pq~~~L~~~~~~~~I~HGG~g----t~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~~--G~G~~l~~~~~~~~~~~~ 430 (487)
.... ..-..+++|.=.|.- ++..++ .-+|+|.+|... +-.+ -.-+.+ . |+.+.-- ++..+...
T Consensus 51 ~~a~--~~~~~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv---~~~~nAa~ 122 (159)
T 3rg8_A 51 KEYE--ALDRPKLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALV---LEPKNAAL 122 (159)
T ss_dssp HHHH--TSCSCEEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEEC---CSHHHHHH
T ss_pred HHhh--hcCCCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEe---cCchHHHH
Confidence 1100 000112555544432 333333 568999999653 1122 122222 2 4443311 12356666
Q ss_pred HHHHHHHhccCchhHHHHHHHHHHHHHHHh
Q 011396 431 IANYAKGLIQGEEGKLLRSKMRALKDAAAN 460 (487)
Q Consensus 431 l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~ 460 (487)
++-.|-.+ .| +.++++.+.+++..++
T Consensus 123 lA~~Il~~-~d---~~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 123 LAARIFSL-YD---KEIADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHHTT-TC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CC---HHHHHHHHHHHHHHHH
Confidence 66655544 46 7888888888777664
No 202
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=26.09 E-value=56 Score=28.65 Aligned_cols=26 Identities=27% Similarity=0.299 Sum_probs=20.2
Q ss_pred CcEEEEEcCCCcc--CHHHHHHHHHHHH
Q 011396 11 RAHVAMVPTPGIG--HLIPQVELAKRLV 36 (487)
Q Consensus 11 ~~~Il~~~~~~~G--H~~P~l~LA~~L~ 36 (487)
|++|++..|+-+| .+||...++++|.
T Consensus 2 m~~VLvTGF~PF~~~~~NPS~~~v~~L~ 29 (223)
T 3ro0_A 2 EKKVLLTGFDPFGGETVNPSWEAVKRLN 29 (223)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHTT
T ss_pred CCEEEEEeCCCCCCCCCChHHHHHHHhc
Confidence 4678887766553 4799999999994
No 203
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=25.98 E-value=57 Score=29.56 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
+...+|.++..|..| ..+|..|+++ ||+|+++..
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~-G~~V~l~d~ 35 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFH-GFAVTAYDI 35 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhC-CCeEEEEeC
Confidence 335689999776666 4688999887 999998754
No 204
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=25.90 E-value=1.6e+02 Score=20.30 Aligned_cols=53 Identities=8% Similarity=0.059 Sum_probs=31.1
Q ss_pred CCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhc-CCCCCh-HHHHHHHHHH
Q 011396 424 GLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAANAL-SPDGSS-TKSLAQVAQK 478 (487)
Q Consensus 424 ~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~-~~~g~~-~~~~~~~~~~ 478 (487)
+..|.++|.++|+++|.+.|...+-. +++.+.+.+.. +.+=+. ...|.+.++.
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT~--K~VR~~Le~~~pg~dLs~kK~~I~~~I~~ 64 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVTM--KQICKKVYENYPTYDLTERKDFIKTTVKE 64 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHCSSSCCSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHccCCCChHHHHHHHHHHHH
Confidence 35899999999999999866433222 33555555443 333222 2355555444
No 205
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=25.83 E-value=5e+02 Score=25.76 Aligned_cols=34 Identities=9% Similarity=0.003 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.++|++.. .-.-.+.|++.|.+- |.+|..+.+..
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~El-Gm~vv~v~~~~ 393 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLEL-GCEPTVILSHN 393 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHC-CCEEEEEEeCC
Confidence 35777774 334466777778764 99998877654
No 206
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=25.75 E-value=36 Score=32.23 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++|.|+..|..|. .+|..|++. ||+|+++...
T Consensus 16 ~kI~iIG~G~mG~-----~la~~L~~~-G~~V~~~~r~ 47 (366)
T 1evy_A 16 NKAVVFGSGAFGT-----ALAMVLSKK-CREVCVWHMN 47 (366)
T ss_dssp EEEEEECCSHHHH-----HHHHHHTTT-EEEEEEECSC
T ss_pred CeEEEECCCHHHH-----HHHHHHHhC-CCEEEEEECC
Confidence 3899998877774 578899776 9999988643
No 207
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=25.74 E-value=27 Score=34.56 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
|++|+++..|-.| |.-|..|+++ ||+|+++=.
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~-G~~V~VlEa 32 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAA-GIPVLLLEQ 32 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHT-TCCEEEECC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHC-CCcEEEEcc
Confidence 4578888766555 7778889887 999999843
No 208
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=25.71 E-value=69 Score=29.43 Aligned_cols=31 Identities=19% Similarity=0.443 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFI 47 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~ 47 (487)
|++|.|+..|..|. ++|+.|+++ ||+|+++-
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~-G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKA-GYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHT-TCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhC-CCeEEEEc
Confidence 45799999999984 679999887 99999874
No 209
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=25.69 E-value=94 Score=23.79 Aligned_cols=65 Identities=11% Similarity=0.023 Sum_probs=43.7
Q ss_pred ccccccccccccccchh---------HHHHHhhCCceeccccccccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHH
Q 011396 365 LRHGSTGGFLSHCGWNS---------ILESIVHGVPIIAWPLYAEQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYA 435 (487)
Q Consensus 365 L~~~~~~~~I~HGG~gt---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i 435 (487)
+..++ ++|--.|..| +..|...|+|+|.+=-++.+. --..+++ .+.-+.- .+.+.|.++|
T Consensus 36 I~~~~--~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~-~a~~iV~-------Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDAD--AVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEA-VSSEVVG-------WNPHCIRDAL 104 (111)
T ss_dssp SSSCS--EEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHH-HCSEEEC-------SCHHHHHHHH
T ss_pred cccCC--EEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHh-hCceecc-------CCHHHHHHHH
Confidence 45566 8888888887 667888999998876666442 1222444 3332222 8999999999
Q ss_pred HHhcc
Q 011396 436 KGLIQ 440 (487)
Q Consensus 436 ~~ll~ 440 (487)
+..+.
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 88753
No 210
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=25.24 E-value=3e+02 Score=24.97 Aligned_cols=104 Identities=11% Similarity=0.075 Sum_probs=64.0
Q ss_pred HHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCcccccccccccccccc
Q 011396 297 LNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~H 376 (487)
-.++++.++..+.++++..+... -+|+.|.+..+..-+-+ |.++| =..
T Consensus 155 ~~~~~~~l~~~~~Dlivlagy~~-------------------il~~~~l~~~~~~~iNi-----HpSlL--------P~~ 202 (288)
T 3obi_A 155 EAAITALIAQTHTDLVVLARYMQ-------------------ILSDEMSARLAGRCINI-----HHSFL--------PGF 202 (288)
T ss_dssp HHHHHHHHHHHTCCEEEESSCCS-------------------CCCHHHHHHTTTSEEEE-----EEECS--------SCC
T ss_pred HHHHHHHHHhcCCCEEEhhhhhh-------------------hCCHHHHhhhcCCeEEe-----Ccccc--------cCC
Confidence 34577888888888888777642 36777765554321212 22333 235
Q ss_pred ccchhHHHHHhhCCceecccccc--ccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhc
Q 011396 377 CGWNSILESIVHGVPIIAWPLYA--EQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 377 GG~gt~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 439 (487)
.|.+....|+..|+....+-.+. +..+-+..+.+ . -+.+... -|.++|.+.+.++-
T Consensus 203 rG~~p~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~Q-~--~v~i~~~----dt~~~L~~r~~~~e 260 (288)
T 3obi_A 203 KGAKPYHQAFDRGVKLIGATAHYVTSALDEGPIIDQ-D--VERISHR----DTPADLVRKGRDIE 260 (288)
T ss_dssp CSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHcCCCEEEEEEEEECCCCcCCCeEEE-E--EEecCCC----CCHHHHHHHHHHHH
Confidence 69999999999999987666543 34444443433 1 2223333 48888888777664
No 211
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=24.97 E-value=50 Score=31.57 Aligned_cols=34 Identities=9% Similarity=0.040 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
.++.+|+++..|-.| +.+|..|+++ |++|+++=.
T Consensus 21 ~~~~dV~IVGaG~aG-----l~~A~~La~~-G~~V~v~E~ 54 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGG-----LSAAVALKQS-GIDCDVYEA 54 (407)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEES
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhC-CCCEEEEeC
Confidence 446789998766544 7889999887 999999853
No 212
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=24.65 E-value=3.3e+02 Score=23.31 Aligned_cols=108 Identities=7% Similarity=-0.003 Sum_probs=0.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCceEEeCCCCCCCCCCCchh
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQH-NFLVTIFIPTIDDGTGSSMEPQRQVLESLPTSISTIFLPPVSFDDLPDDVR 90 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 90 (487)
+||+++..+..+ -+-+|.+.+.+.. +|+|..+.+.. ............++.+..++.....+
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~--------~~~~~~~~A~~~gIp~~~~~~~~~~~------ 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNK--------ADAFGLERARQAGIATHTLIASAFDS------ 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESC--------TTCHHHHHHHHTTCEEEECCGGGCSS------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCC--------CchHHHHHHHHcCCcEEEeCcccccc------
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhcCCCceEEE-eCCCcchHHHHHHHhCCCeEEEecc
Q 011396 91 METRITLTLARSLSSLRDALKVLAESTRLVALV-VDIFGSAAFDVANEFGVPVYIFFTT 148 (487)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~vI-~D~~~~~~~~~A~~lgIP~v~~~~~ 148 (487)
.+.+.+.+.+.+++.+||+|| ..++-.-...+-......++-+.++
T Consensus 64 ------------r~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 64 ------------REAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ------------HHHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------------hhhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
No 213
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=24.65 E-value=44 Score=30.60 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+++|.|+..|..|+ .||..|+++ ||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~-G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAAT-GHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhC-CCeEEEEECC
Confidence 46899998887776 578889887 9999987544
No 214
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=24.39 E-value=64 Score=29.68 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=27.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 9 IPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 9 ~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
..+++|.|+..|..| ..+|+.|++. ||+|+++...
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~-G~~V~~~dr~ 53 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKN-GFKVTVWNRT 53 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHC-CCeEEEEeCC
Confidence 446789999777666 5678999887 9999987543
No 215
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=24.36 E-value=58 Score=30.47 Aligned_cols=26 Identities=12% Similarity=0.146 Sum_probs=22.3
Q ss_pred cccccccchhHHHHHh------hCCceecccc
Q 011396 372 GFLSHCGWNSILESIV------HGVPIIAWPL 397 (487)
Q Consensus 372 ~~I~HGG~gt~~eal~------~GvP~l~~P~ 397 (487)
++|.=||=||+.|++. .++|+.++|.
T Consensus 83 ~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 83 VLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 8999999999999863 4679999996
No 216
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=24.18 E-value=51 Score=29.00 Aligned_cols=27 Identities=19% Similarity=0.174 Sum_probs=21.1
Q ss_pred CcEEEEEcCCCcc--CHHHHHHHHHHHHh
Q 011396 11 RAHVAMVPTPGIG--HLIPQVELAKRLVH 37 (487)
Q Consensus 11 ~~~Il~~~~~~~G--H~~P~l~LA~~L~~ 37 (487)
|++|++..|+-+| -+||...++++|.+
T Consensus 23 mk~VLvTGF~PF~g~~~NPS~~~v~~L~~ 51 (228)
T 4hps_A 23 MKTILVTAFDPFGGEAINPSWEAIKPLQG 51 (228)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHGGGTT
T ss_pred CCEEEEEeccCCCCCCCChHHHHHHHhcC
Confidence 5689888776654 47999999999954
No 217
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=24.16 E-value=53 Score=29.96 Aligned_cols=33 Identities=18% Similarity=0.133 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+++|.++..|..|. .+|..|.++ ||+|+++...
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~-g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQG-GNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECSC
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhC-CCcEEEEECC
Confidence 45899998766664 578889887 9999998653
No 218
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=24.06 E-value=72 Score=29.37 Aligned_cols=41 Identities=24% Similarity=0.366 Sum_probs=21.3
Q ss_pred CcccCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 1 METQNSKQIPRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 1 ~~~~~~~~~~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
|.++..+| +++|++. |+.|-+- ..|+++|.++ ||+|+.+.-
T Consensus 1 ~~~~~~~~--~~~vlVT--GatGfIG--~~l~~~Ll~~-G~~V~~~~r 41 (338)
T 2rh8_A 1 MATQHPIG--KKTACVV--GGTGFVA--SLLVKLLLQK-GYAVNTTVR 41 (338)
T ss_dssp ----------CCEEEEE--CTTSHHH--HHHHHHHHHT-TCEEEEEES
T ss_pred CCcCcCCC--CCEEEEE--CCchHHH--HHHHHHHHHC-CCEEEEEEc
Confidence 66666664 3455544 3444433 4678899887 999987653
No 219
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=23.99 E-value=4.1e+02 Score=24.09 Aligned_cols=32 Identities=9% Similarity=0.248 Sum_probs=19.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCC--CEEEEEe
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHN--FLVTIFI 47 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~G--H~Vt~~~ 47 (487)
+++|++. |+.|.+- ..|+++|.++ | ++|+...
T Consensus 24 ~~~vlVt--GatG~iG--~~l~~~L~~~-g~~~~v~~~~ 57 (346)
T 4egb_A 24 AMNILVT--GGAGFIG--SNFVHYMLQS-YETYKIINFD 57 (346)
T ss_dssp CEEEEEE--TTTSHHH--HHHHHHHHHH-CTTEEEEEEE
T ss_pred CCeEEEE--CCccHHH--HHHHHHHHhh-CCCcEEEEEe
Confidence 4565554 4445443 4788999888 9 5555554
No 220
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=23.91 E-value=3.5e+02 Score=23.38 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.++++++.++.| + -.++|++|+++ |++|.++.-.
T Consensus 9 ~k~vlITGas~g-I--G~~~a~~l~~~-G~~V~~~~r~ 42 (261)
T 3n74_A 9 GKVALITGAGSG-F--GEGMAKRFAKG-GAKVVIVDRD 42 (261)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHT-TCEEEEEESC
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHC-CCEEEEEcCC
Confidence 346677755542 2 36899999888 9999887644
No 221
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=23.79 E-value=95 Score=26.59 Aligned_cols=26 Identities=19% Similarity=0.129 Sum_probs=20.1
Q ss_pred cccccccchhHHHHHh---------hCCceecccc
Q 011396 372 GFLSHCGWNSILESIV---------HGVPIIAWPL 397 (487)
Q Consensus 372 ~~I~HGG~gt~~eal~---------~GvP~l~~P~ 397 (487)
.++-=||.||+-|... +++|++++-.
T Consensus 121 ~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 121 FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 6667789999888743 5899998853
No 222
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=23.68 E-value=39 Score=28.96 Aligned_cols=42 Identities=10% Similarity=0.035 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhcCCCceEEEeCCCcchHHHHHHHhCCCeEEEecch
Q 011396 104 SSLRDALKVLAESTRLVALVVDIFGSAAFDVANEFGVPVYIFFTTT 149 (487)
Q Consensus 104 ~~~~~~l~~~~~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~ 149 (487)
.+.++.++++ ++.+.|+||.|.. ...+|+++|+|.+.+.++.
T Consensus 129 ~e~~~~i~~l-~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 129 DEITTLISKV-KTENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GGHHHHHHHH-HHTTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHH-HHCCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 3445555554 3459999999873 3678999999998876643
No 223
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=23.60 E-value=71 Score=23.77 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCC-CEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHN-FLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~G-H~Vt~~~~~ 49 (487)
+++|+++..|..| ..+++.|.++ | |+|+.+...
T Consensus 5 ~~~v~I~G~G~iG-----~~~~~~l~~~-g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIG-----QMIAALLKTS-SNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHC-SSEEEEEEESC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhC-CCceEEEEeCC
Confidence 4578877543334 4678889887 9 999887654
No 224
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=23.58 E-value=3.3e+02 Score=24.70 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=63.1
Q ss_pred HHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCcccccccccccccccc
Q 011396 297 LNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~H 376 (487)
-.++++.++..+.++++..+... -+|+.+.+..+..-+-+ |.++| =..
T Consensus 160 ~~~~~~~l~~~~~Dlivla~y~~-------------------il~~~~l~~~~~~~iNi-----HpSlL--------P~~ 207 (292)
T 3lou_A 160 EAQWLDVFETSGAELVILARYMQ-------------------VLSPEASARLANRAINI-----HHSFL--------PGF 207 (292)
T ss_dssp HHHHHHHHHHHTCSEEEESSCCS-------------------CCCHHHHHHTTTSEEEE-----EEECS--------SCC
T ss_pred HHHHHHHHHHhCCCEEEecCchh-------------------hCCHHHHhhhcCCeEEe-----CCCcC--------cCC
Confidence 34577777777888887777642 36777765554322212 22333 335
Q ss_pred ccchhHHHHHhhCCceecccccc--ccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhc
Q 011396 377 CGWNSILESIVHGVPIIAWPLYA--EQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 377 GG~gt~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 439 (487)
.|++....|+.+|+....+-.+. +..+-+..+.+ . -+.+... -|.++|.+.+.++-
T Consensus 208 rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q-~--~v~i~~~----dt~~~L~~r~~~~e 265 (292)
T 3lou_A 208 KGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQ-V--VERVDHS----YRPEQLLAVGRDVE 265 (292)
T ss_dssp CSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEEE-E--EEEcCCC----CCHHHHHHHHHHHH
Confidence 68999999999999987766543 33344433333 1 1223333 48888888777654
No 225
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=23.53 E-value=66 Score=28.58 Aligned_cols=38 Identities=18% Similarity=0.129 Sum_probs=31.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
+.|.|..-|+-|-..=...||..|+++ |++|.++=.+.
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~-G~~VlliD~D~ 39 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAM-GKTIMVVGCDP 39 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTT-TCCEEEEEECT
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHC-CCcEEEEcCCC
Confidence 356777778889999999999999887 99999885443
No 226
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=23.34 E-value=1.2e+02 Score=29.50 Aligned_cols=32 Identities=9% Similarity=0.084 Sum_probs=22.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++|+++.. | .-.+.+++++.+. |++|+++.+.
T Consensus 2 k~ilI~g~---g--~~~~~i~~a~~~~-G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIANR---G--EIAVRIIRACRDL-GIQTVAIYSE 33 (451)
T ss_dssp CEEEECCC---H--HHHHHHHHHHHHT-TCEEEEEEEG
T ss_pred ceEEEeCC---C--HHHHHHHHHHHHc-CCEEEEEecc
Confidence 46777652 3 2456789999776 9999988754
No 227
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.24 E-value=79 Score=26.98 Aligned_cols=21 Identities=14% Similarity=0.262 Sum_probs=16.8
Q ss_pred HHHHHHHHH-hcCCCEEEEEeCC
Q 011396 28 QVELAKRLV-HQHNFLVTIFIPT 49 (487)
Q Consensus 28 ~l~LA~~L~-~r~GH~Vt~~~~~ 49 (487)
-.+++++|+ ++ ||+|+.+.-.
T Consensus 18 G~~~~~~l~~~~-g~~V~~~~r~ 39 (221)
T 3r6d_A 18 AQXLTATLLTYT-DMHITLYGRQ 39 (221)
T ss_dssp HHHHHHHHHHHC-CCEEEEEESS
T ss_pred HHHHHHHHHhcC-CceEEEEecC
Confidence 368899998 66 9999988654
No 228
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=23.14 E-value=1.3e+02 Score=26.66 Aligned_cols=39 Identities=13% Similarity=0.064 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCcc------C-----HHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 11 RAHVAMVPTPGIG------H-----LIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 11 ~~~Il~~~~~~~G------H-----~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
|++|+++.....+ + ..=++.-...|.+. |++|+++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~a-G~~V~iaS~~g 52 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKH-GFEVDFVSETG 52 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 5578877765322 1 23466777788666 99999999754
No 229
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=22.82 E-value=2.4e+02 Score=24.75 Aligned_cols=33 Identities=18% Similarity=-0.004 Sum_probs=19.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFI 47 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~ 47 (487)
-+++.+.|-.=-+...=.|++.. ++ |++|++++
T Consensus 6 vL~v~aHPDDe~l~~Ggtia~~~-~~-G~~V~vv~ 38 (242)
T 2ixd_A 6 ILAFGAHADDVEIGMAGTIAKYT-KQ-GYEVGICD 38 (242)
T ss_dssp EEEEESSTTHHHHHHHHHHHHHH-HT-TCCEEEEE
T ss_pred EEEEEeCCChHHHhHHHHHHHHH-HC-CCeEEEEE
Confidence 35666666543343444455444 66 99988886
No 230
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=22.79 E-value=3.8e+02 Score=24.23 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=62.7
Q ss_pred HHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCcccccccccccccccc
Q 011396 297 LNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~H 376 (487)
-.++++.++..+.++++..+... -+|+.+.+..+..-+-+ |.++| =..
T Consensus 155 ~~~~~~~l~~~~~Dlivla~y~~-------------------il~~~~l~~~~~~~iNi-----HpSlL--------P~~ 202 (286)
T 3n0v_A 155 ERKVLQVIEETGAELVILARYMQ-------------------VLSPELCRRLDGWAINI-----HHSLL--------PGF 202 (286)
T ss_dssp HHHHHHHHHHHTCSEEEESSCCS-------------------CCCHHHHHHTTTSEEEE-----EECSS--------TTC
T ss_pred HHHHHHHHHhcCCCEEEeccccc-------------------ccCHHHHhhhcCCeEEe-----ccccc--------cCC
Confidence 34577777777888887777642 36777765554322212 22333 335
Q ss_pred ccchhHHHHHhhCCceecccccc--ccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhc
Q 011396 377 CGWNSILESIVHGVPIIAWPLYA--EQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 377 GG~gt~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 439 (487)
.|++....|+.+|+....+-.+. +..+-+..+.+ . -+.+... -|.++|.+.+.++-
T Consensus 203 rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~Q-~--~~~i~~~----dt~~~L~~r~~~~e 260 (286)
T 3n0v_A 203 KGAKPYHQAYNKGVKMVGATAHYINNDLDEGPIIAQ-G--VEVVDHS----HYPEDLIAKGRDIE 260 (286)
T ss_dssp CCSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCCeEEEEEEEEcCCCCCCceeEE-E--EEEcCCC----CCHHHHHHHHHHHH
Confidence 68999999999999987766543 33333333333 1 1223333 48888888777654
No 231
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=22.70 E-value=76 Score=29.67 Aligned_cols=28 Identities=18% Similarity=0.409 Sum_probs=19.3
Q ss_pred CceEEEeCCCcch-HHHHHHHhCCCeEEE
Q 011396 118 RLVALVVDIFGSA-AFDVANEFGVPVYIF 145 (487)
Q Consensus 118 ~pD~vI~D~~~~~-~~~~A~~lgIP~v~~ 145 (487)
+||+||....... .....+.+|||++.+
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~ 124 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVL 124 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEE
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEE
Confidence 9999997653222 223567789998875
No 232
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=22.69 E-value=62 Score=30.11 Aligned_cols=29 Identities=7% Similarity=0.063 Sum_probs=19.8
Q ss_pred CceEEEeCCCcchHHHHHHHhCCCeEEEe
Q 011396 118 RLVALVVDIFGSAAFDVANEFGVPVYIFF 146 (487)
Q Consensus 118 ~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 146 (487)
+||+||..........-.++.|||++.+.
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEc
Confidence 99999987643223334566799988764
No 233
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=22.61 E-value=3.9e+02 Score=23.42 Aligned_cols=34 Identities=18% Similarity=0.117 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.++++++.++.| =-.++|+.|+++ |++|.++.-.
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~-G~~V~~~~r~ 44 (271)
T 3tzq_B 11 NKVAIITGACGG---IGLETSRVLARA-GARVVLADLP 44 (271)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHT-TCEEEEEECT
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHC-CCEEEEEcCC
Confidence 357777766553 246899999888 9999887644
No 234
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=22.56 E-value=73 Score=26.18 Aligned_cols=46 Identities=9% Similarity=0.119 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHhcCCCceEEEeCCCcch-------------H--HHHHHHhCCCeEEEecchHH
Q 011396 102 SLSSLRDALKVLAESTRLVALVVDIFGSA-------------A--FDVANEFGVPVYIFFTTTAM 151 (487)
Q Consensus 102 ~~~~~~~~l~~~~~~~~pD~vI~D~~~~~-------------~--~~~A~~lgIP~v~~~~~~~~ 151 (487)
....+.+.+++. +||.+..+..++. + ..++...|||+..+.|....
T Consensus 47 i~~~l~~~i~~~----~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~~vK 107 (158)
T 1hjr_A 47 IYAGVTEIITQF----QPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVK 107 (158)
T ss_dssp HHHHHHHHHHHH----CCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHHHH
T ss_pred HHHHHHHHHHHc----CCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHHH
Confidence 334444445444 9998776543321 1 24777789998887665443
No 235
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=22.49 E-value=1.1e+02 Score=23.77 Aligned_cols=36 Identities=8% Similarity=0.030 Sum_probs=26.0
Q ss_pred EEEEcCCCcc--CHHHHHHHHHHHHhcCCCEE-EEEeCCC
Q 011396 14 VAMVPTPGIG--HLIPQVELAKRLVHQHNFLV-TIFIPTI 50 (487)
Q Consensus 14 Il~~~~~~~G--H~~P~l~LA~~L~~r~GH~V-t~~~~~~ 50 (487)
++++..+.+| .....+.+|..+.+. ||+| +++....
T Consensus 4 ~iiv~~~p~~~~~~~~al~~a~a~~~~-g~~v~~vff~~d 42 (130)
T 2hy5_A 4 ALQINEGPYQHQASDSAYQFAKAALEK-GHEIFRVFFYHD 42 (130)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHHT-TCEEEEEEECGG
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHhc-CCeeCEEEEech
Confidence 3444444444 457789999999888 9999 8887654
No 236
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=22.45 E-value=77 Score=28.65 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=27.8
Q ss_pred EEEE-cCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 14 VAMV-PTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 14 Il~~-~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
|+|. +-|+-|-..=...||..|+++ |++|.++=.+
T Consensus 7 I~v~s~KGGvGKTT~a~nLA~~La~~-G~~VlliD~D 42 (286)
T 2xj4_A 7 IVVGNEKGGAGKSTIAVHLVTALLYG-GAKVAVIDLD 42 (286)
T ss_dssp EEECCSSSCTTHHHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHHHC-CCcEEEEECC
Confidence 4443 346779999999999999887 9999887544
No 237
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=22.44 E-value=3.2e+02 Score=24.00 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.++++++.++.| + -.++|++|+++ |++|.+....
T Consensus 18 ~k~~lVTGas~g-I--G~aia~~l~~~-G~~V~~~~~~ 51 (270)
T 3is3_A 18 GKVALVTGSGRG-I--GAAVAVHLGRL-GAKVVVNYAN 51 (270)
T ss_dssp TCEEEESCTTSH-H--HHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHC-CCEEEEEcCC
Confidence 457778866543 2 36889999888 9999886543
No 238
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=22.44 E-value=3.5e+02 Score=23.46 Aligned_cols=33 Identities=24% Similarity=0.231 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
.++++++.++.| =-.++|++|+++ |++|.++.-
T Consensus 9 ~k~vlVTGas~g---IG~aia~~l~~~-G~~V~~~~r 41 (257)
T 3tl3_A 9 DAVAVVTGGASG---LGLATTKRLLDA-GAQVVVLDI 41 (257)
T ss_dssp -CEEEEETTTSH---HHHHHHHHHHHH-TCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHC-CCEEEEEeC
Confidence 357777765543 246899999988 999988765
No 239
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=22.33 E-value=84 Score=27.44 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=28.4
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 011396 11 RAHVAMVPT-PGIGHLIPQVELAKRLVHQHNFLVTIFI 47 (487)
Q Consensus 11 ~~~Il~~~~-~~~GH~~P~l~LA~~L~~r~GH~Vt~~~ 47 (487)
|+.|++... .+-|-..=.+.|++.|.++ |.+|.++=
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~-G~~V~~~K 40 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQ-NIKSLCLK 40 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHT-TCCEEEEC
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHC-CCeeEEec
Confidence 345555554 4569999999999999887 99999974
No 240
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=22.25 E-value=88 Score=28.33 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=24.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
++++|.|+..|..|. .+|+.|.+. ||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~-g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKE-GVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHC-CCeEEEEeC
Confidence 356899998777664 467888777 999987643
No 241
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=22.24 E-value=1.2e+02 Score=26.53 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=19.0
Q ss_pred cEEEEEcCCCcc--CHHHHHHHHHHHHh
Q 011396 12 AHVAMVPTPGIG--HLIPQVELAKRLVH 37 (487)
Q Consensus 12 ~~Il~~~~~~~G--H~~P~l~LA~~L~~ 37 (487)
++|++..|+-+| ..||.-.++++|..
T Consensus 2 k~VLvTGF~PF~~~~~NPS~~~v~~L~~ 29 (220)
T 1a2z_A 2 KKVLITGFEPFGGDSKNPTEQIAKYFDR 29 (220)
T ss_dssp EEEEEEEECCCTTCSCCHHHHHHHHHTT
T ss_pred CEEEEeeccCCCCCCCCcHHHHHHHhhc
Confidence 357777765443 46999999999944
No 242
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=22.23 E-value=66 Score=29.35 Aligned_cols=33 Identities=24% Similarity=0.094 Sum_probs=22.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 14 VAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 14 Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
.++++ |+.|-+ -..|+++|.++ ||+|+.+.-..
T Consensus 14 ~vlVT-GatG~i--G~~l~~~L~~~-G~~V~~~~r~~ 46 (321)
T 2pk3_A 14 RALIT-GVAGFV--GKYLANHLTEQ-NVEVFGTSRNN 46 (321)
T ss_dssp EEEEE-TTTSHH--HHHHHHHHHHT-TCEEEEEESCT
T ss_pred eEEEE-CCCChH--HHHHHHHHHHC-CCEEEEEecCC
Confidence 34444 444544 35788999887 99999987543
No 243
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=22.18 E-value=3.7e+02 Score=23.69 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.++++++.++.| =-.++|++|+++ |++|.++.-.
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~-G~~V~~~~r~ 61 (272)
T 4dyv_A 28 KKIAIVTGAGSG---VGRAVAVALAGA-GYGVALAGRR 61 (272)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHT-TCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHC-CCEEEEEECC
Confidence 457788865543 236889999888 9999887644
No 244
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=22.18 E-value=72 Score=24.64 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++|+++.. |.+- ..+|+.|.++ ||+|+++...
T Consensus 5 m~i~IiG~---G~iG--~~~a~~L~~~-g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGI---GRVG--YTLAKSLSEK-GHDIVLIDID 36 (140)
T ss_dssp CEEEEECC---SHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECC---CHHH--HHHHHHHHhC-CCeEEEEECC
Confidence 57888843 5443 3578899887 9999988654
No 245
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=22.16 E-value=4e+02 Score=24.34 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhc-CCCEEEEEeCCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQ-HNFLVTIFIPTI 50 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r-~GH~Vt~~~~~~ 50 (487)
+++||+++..+. || .+.+|..+..+. .+.+|..+.+..
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~ 142 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNH 142 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESS
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECc
Confidence 466888777555 54 466666665321 136888887653
No 246
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=22.14 E-value=97 Score=28.59 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=27.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
.+++|.|+..|..| ..+|+.|++. ||+|+++...
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~-G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEA-GYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHT-TCEEEEECSC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhC-CCeEEEEcCC
Confidence 35689999888777 5688899887 9999987543
No 247
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=22.08 E-value=3.8e+02 Score=23.07 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++++.++.| =-.++|+.|+++ |++|+++.-.
T Consensus 3 k~vlVTGas~g---IG~~ia~~l~~~-G~~V~~~~r~ 35 (247)
T 3dii_A 3 RGVIVTGGGHG---IGKQICLDFLEA-GDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHC-CCEEEEEeCC
Confidence 35666755543 246889999888 9999887643
No 248
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=21.99 E-value=3e+02 Score=23.98 Aligned_cols=33 Identities=21% Similarity=0.100 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++++.++.| =-.++|++|+++ |++|.++.-.
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~~-G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVEG-GAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHC-CCEEEEEeCC
Confidence 46777755553 236899999888 9999887643
No 249
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=21.79 E-value=3.2e+02 Score=24.07 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
.++++++.++.| =-.++|+.|+++ |++|.+...
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~~-G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAAA-GAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHC-CCEEEEEeC
Confidence 457788866553 246889999888 999988765
No 250
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=21.77 E-value=52 Score=23.67 Aligned_cols=56 Identities=11% Similarity=0.061 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCc-cccccccccccccc
Q 011396 297 LNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQ-VQVLRHGSTGGFLS 375 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq-~~~L~~~~~~~~I~ 375 (487)
+..+++.+...+.+.++++-+... +...+. +..|+.+ ..+++... +--.
T Consensus 21 l~~fl~~a~~~g~~~v~IIHGkG~----------------------GvLr~~------V~~~L~~~~~V~~f~~--a~~~ 70 (83)
T 2zqe_A 21 VDQALEEARALGLSTLRLLHGKGT----------------------GALRQA------IREALRRDKRVESFAD--APPG 70 (83)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTT----------------------SHHHHH------HHHHHHHCTTEEEEEE--CCTT
T ss_pred HHHHHHHHHHCCCCEEEEEECCCc----------------------hHHHHH------HHHHHhcCCceeEEEE--cCcc
Confidence 445555555677777777766432 111111 4466665 55565666 6678
Q ss_pred cccchhH
Q 011396 376 HCGWNSI 382 (487)
Q Consensus 376 HGG~gt~ 382 (487)
|||.|.+
T Consensus 71 ~GG~Gat 77 (83)
T 2zqe_A 71 EGGHGVT 77 (83)
T ss_dssp TTGGGEE
T ss_pred cCCCEEE
Confidence 9998854
No 251
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=21.43 E-value=3.8e+02 Score=22.82 Aligned_cols=30 Identities=17% Similarity=0.066 Sum_probs=21.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 011396 14 VAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFI 47 (487)
Q Consensus 14 Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~ 47 (487)
.++++.++ |-+ -.+++++|+++ |++|+++.
T Consensus 7 ~vlItGas-ggi--G~~~a~~l~~~-G~~V~~~~ 36 (247)
T 2hq1_A 7 TAIVTGSS-RGL--GKAIAWKLGNM-GANIVLNG 36 (247)
T ss_dssp EEEESSCS-SHH--HHHHHHHHHHT-TCEEEEEE
T ss_pred EEEEECCC-chH--HHHHHHHHHHC-CCEEEEEc
Confidence 55666443 333 36889999888 99999874
No 252
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=21.42 E-value=3.9e+02 Score=22.96 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=62.1
Q ss_pred HHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCcccccccccccccccc
Q 011396 297 LNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSH 376 (487)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~H 376 (487)
-.++++.++..+.+++++.+... -+|+.+.+..+..-+-+ |++ +.=..
T Consensus 72 d~~~~~~l~~~~~Dliv~agy~~-------------------il~~~~l~~~~~~~iNi-----------HpS--LLP~y 119 (215)
T 3tqr_A 72 ESTLQKTIDHYDPKLIVLAGFMR-------------------KLGKAFVSHYSGRMINI-----------HPS--LLPKY 119 (215)
T ss_dssp HHHHHHHHHTTCCSEEEESSCCS-------------------CCCHHHHHHTTTSEEEE-----------ESS--STTTT
T ss_pred HHHHHHHHHhcCCCEEEEccchh-------------------hCCHHHHhhccCCeEEe-----------Ccc--cCCCC
Confidence 34577788888888887777642 36777665543321212 333 33335
Q ss_pred ccchhHHHHHhhCCceecccccc--ccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHh
Q 011396 377 CGWNSILESIVHGVPIIAWPLYA--EQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGL 438 (487)
Q Consensus 377 GG~gt~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~l 438 (487)
.|...+..|+.+|.....+-.+. +..+-+..+.+ . -+.+... -|.++|.+.+.++
T Consensus 120 rG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~ 176 (215)
T 3tqr_A 120 TGLNTHERALAAGETEHGVSVHYVTEDLDAGPLICQ-A--RLSITPQ----DTPETLKTRVHAL 176 (215)
T ss_dssp CSSCHHHHHHHTTCSEEEEEEEECC-CTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHH
T ss_pred CChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE-E--EEecCCC----CCHHHHHHHHHHH
Confidence 68999999999999986665542 44444444444 2 2223333 4888888877655
No 253
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=21.29 E-value=91 Score=27.49 Aligned_cols=39 Identities=26% Similarity=0.256 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCCceEEEeCCCcch-------HHHHHHHhCCCeEE
Q 011396 104 SSLRDALKVLAESTRLVALVVDIFGSA-------AFDVANEFGVPVYI 144 (487)
Q Consensus 104 ~~~~~~l~~~~~~~~pD~vI~D~~~~~-------~~~~A~~lgIP~v~ 144 (487)
+.+-+.++.+ +.+||+|++|..... |.-+.-.+|+|.|=
T Consensus 95 P~ll~al~~L--~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIG 140 (237)
T 3goc_A 95 PTVLAALDAL--PCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIG 140 (237)
T ss_dssp HHHHHHHHTS--SSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEE
T ss_pred HHHHHHHHhc--CCCCCEEEEeCceeecCCCcchhheeeeecCCCEEe
Confidence 4444445444 348999999976654 33466668899764
No 254
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=21.27 E-value=2.8e+02 Score=24.84 Aligned_cols=33 Identities=6% Similarity=0.089 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 13 HVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 13 ~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++++++.++.| + -.++|+.|+++ |++|.++.-.
T Consensus 48 k~vlVTGas~G-I--G~aia~~la~~-G~~V~~~~r~ 80 (291)
T 3ijr_A 48 KNVLITGGDSG-I--GRAVSIAFAKE-GANIAIAYLD 80 (291)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHC-CCEEEEEeCC
Confidence 57777766553 2 46899999888 9999887654
No 255
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=21.10 E-value=4.7e+02 Score=23.72 Aligned_cols=34 Identities=15% Similarity=0.042 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 11 RAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 11 ~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
+++|++. |+.|.+- ..|++.|.++ ||+|+.+.-.
T Consensus 25 ~~~vlVt--GatG~iG--~~l~~~L~~~-g~~V~~~~r~ 58 (351)
T 3ruf_A 25 PKTWLIT--GVAGFIG--SNLLEKLLKL-NQVVIGLDNF 58 (351)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEECC
T ss_pred CCeEEEE--CCCcHHH--HHHHHHHHHC-CCEEEEEeCC
Confidence 4566655 4445443 5788999887 9999998754
No 256
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=20.89 E-value=4e+02 Score=22.89 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=63.1
Q ss_pred HHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecccCCccccccccccccccccc
Q 011396 298 NELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 377 (487)
Q Consensus 298 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~I~HG 377 (487)
.++++.++..+.+++++.+... -+|+.+.+..+..-+ ==|++ +.=...
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~~-------------------IL~~~~l~~~~~~~i-----------NiHpS--LLP~yr 119 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFMS-------------------ILPEKFVTDWHHKII-----------NIHPS--LLPSFK 119 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCCS-------------------CCCHHHHHHTTTSEE-----------EEESS--CTTTTC
T ss_pred HHHHHHHHHhCCCEEEEeCCce-------------------EeCHHHHhhccCCeE-----------EECcc--cccCCC
Confidence 4566777788888888777642 367777655443212 12333 333356
Q ss_pred cchhHHHHHhhCCceecccccc--ccchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhc
Q 011396 378 GWNSILESIVHGVPIIAWPLYA--EQKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLI 439 (487)
Q Consensus 378 G~gt~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 439 (487)
|...+..|+.+|.....+-.+. +..+-...+.+ . -+.+... -|.++|.+.+.++-
T Consensus 120 G~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~e 176 (215)
T 3kcq_A 120 GLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIMQ-A--AVPVLRE----DTAESLASRILAAE 176 (215)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE-E--EeecCCC----CCHHHHHHHHHHHH
Confidence 8999999999999876666542 44444444444 2 2223333 48888888776553
No 257
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=20.88 E-value=1.4e+02 Score=25.24 Aligned_cols=65 Identities=12% Similarity=0.117 Sum_probs=38.4
Q ss_pred hhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCch----hHHHHHHHHHHHHHHHh--h--cCCCCChHHHHHH
Q 011396 403 MNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEE----GKLLRSKMRALKDAAAN--A--LSPDGSSTKSLAQ 474 (487)
Q Consensus 403 ~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~----~~~~r~~a~~l~~~~~~--~--~~~~g~~~~~~~~ 474 (487)
+.+..=++ -|+|+.+ |+++|.++|.+++.... -+.|+ +.-.+-..+++ . +..+......+|+
T Consensus 103 d~~~Fe~~-cGVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~ 172 (187)
T 3tl4_X 103 TKMGMNEN-SGVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQ 172 (187)
T ss_dssp CHHHHHHT-TTTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHH
T ss_pred CHHHHHHH-CCCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHH
Confidence 33444444 7888875 99999999999985322 13455 56666666664 2 3334444445554
Q ss_pred HHH
Q 011396 475 VAQ 477 (487)
Q Consensus 475 ~~~ 477 (487)
-+-
T Consensus 173 ~~l 175 (187)
T 3tl4_X 173 EVL 175 (187)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 258
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=20.84 E-value=1.1e+02 Score=27.95 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=23.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 011396 10 PRAHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIP 48 (487)
Q Consensus 10 ~~~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~ 48 (487)
+.++|++. |+.|.+ -..|+++|+++ ||+|+.+.-
T Consensus 19 ~~~~vlVT--GasG~i--G~~l~~~L~~~-g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILIT--GGAGCL--GSNLIEHWLPQ-GHEILVIDN 52 (330)
T ss_dssp TCCEEEEE--TTTSHH--HHHHHHHHGGG-TCEEEEEEC
T ss_pred CCCEEEEE--CCCCHH--HHHHHHHHHHC-CCEEEEEEC
Confidence 34555554 344444 35788999887 999999875
No 259
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=20.81 E-value=79 Score=29.19 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPTI 50 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~~ 50 (487)
++|+++..|+.|- .+|..|.+. ||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHT-TCEEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHhC-CCeEEEEeCCh
Confidence 5899998888774 578888777 99999987653
No 260
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=20.69 E-value=4.3e+02 Score=23.21 Aligned_cols=29 Identities=17% Similarity=0.232 Sum_probs=19.5
Q ss_pred CceEEEeCCCcch----HHHHHHHhCCCeEEEe
Q 011396 118 RLVALVVDIFGSA----AFDVANEFGVPVYIFF 146 (487)
Q Consensus 118 ~pD~vI~D~~~~~----~~~~A~~lgIP~v~~~ 146 (487)
++|.||....... ....+...|||+|.+.
T Consensus 61 ~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~ 93 (297)
T 3rot_A 61 YPSGIATTIPSDTAFSKSLQRANKLNIPVIAVD 93 (297)
T ss_dssp CCSEEEECCCCSSTTHHHHHHHHHHTCCEEEES
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 8998887654332 2345666799998853
No 261
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=20.45 E-value=39 Score=21.57 Aligned_cols=31 Identities=13% Similarity=0.365 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhc
Q 011396 427 GREDIANYAKGLIQGEEGKLLRSKMRALKDAAANAL 462 (487)
Q Consensus 427 ~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~~~ 462 (487)
+..+|...|+.+| ..+..+-+.++..+-..+
T Consensus 3 ~~~dLt~~vq~LL-----~qmq~kFq~mS~~I~~ri 33 (48)
T 3ci9_A 3 TVQDLTSVVQTLL-----QQMQDKFQTISDQIIGRI 33 (48)
T ss_dssp CHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Confidence 7889999999999 468888888888877543
No 262
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=20.30 E-value=76 Score=29.18 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 011396 12 AHVAMVPTPGIGHLIPQVELAKRLVHQHNFLVTIFIPT 49 (487)
Q Consensus 12 ~~Il~~~~~~~GH~~P~l~LA~~L~~r~GH~Vt~~~~~ 49 (487)
++|+++..|+.|- .+|..|.+. ||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~-g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRS-GEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHT-SCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHC-CCeEEEEEcC
Confidence 5799998888884 468888777 9999998764
No 263
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=20.22 E-value=1.7e+02 Score=24.60 Aligned_cols=55 Identities=7% Similarity=-0.026 Sum_probs=42.6
Q ss_pred cchhhHhhhhhccceEEeeecCCCCcCHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Q 011396 401 QKMNAVLLIDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRSKMRALKDAAA 459 (487)
Q Consensus 401 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~ 459 (487)
+-.|+.+-++ .|.-..+--.. .++++|.+.+++-|.|+.-.+.+..+.++.++.+
T Consensus 117 ~~LN~~Ye~k-FGfpFVi~v~G---~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~ 171 (181)
T 2q37_A 117 AEWNVLYKKK-FGFIFIICASG---RTHAEMLHALKERYENRPIVELEIAAMEQMKITE 171 (181)
T ss_dssp HHHHHHHHHH-HSSCCCCCCSS---CCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCeEEEEeCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 3458888888 88877766555 7999999999999998655677777777776655
No 264
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=20.20 E-value=87 Score=29.17 Aligned_cols=81 Identities=16% Similarity=-0.021 Sum_probs=0.0
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCccccccccccccCCCCCCCCCCchhHHHhhcCCCeeecc
Q 011396 278 SESVLFVCFGSGGTLSPEQLNELALGLEMSGQRFLWVVRSPHERAANATYFGIQSMKDPFDFLPKGFLDRTKGVGLVVPS 357 (487)
Q Consensus 278 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~ 357 (487)
.+-.|+++--+... +....+...|+..+..+.+....... -..
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~----------------------------------~~~ 72 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKG----------------------------------DAA 72 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTT----------------------------------HHH
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcc----------------------------------hHH
Q ss_pred cCCccccccccccccccccccchhHHHHH--------hhCCceecccc
Q 011396 358 WSPQVQVLRHGSTGGFLSHCGWNSILESI--------VHGVPIIAWPL 397 (487)
Q Consensus 358 ~~pq~~~L~~~~~~~~I~HGG~gt~~eal--------~~GvP~l~~P~ 397 (487)
-+-...+...++ ++|.-||=||+.|++ ..++|+.++|.
T Consensus 73 ~~~~~~~~~~~d--~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 73 RYVEEARKFGVA--TVIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp HHHHHHHHHTCS--EEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred HHHHHHHhcCCC--EEEEEccchHHHHHHHHHhhcccCCCCeEEEecC
Done!