BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011397
(487 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/443 (45%), Positives = 275/443 (62%), Gaps = 13/443 (2%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F SGKT+S +R+ QL++L +M+NE I AL DL K E S EVA +
Sbjct: 7 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 66
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
+ + +KEL W E + T I EP GVVL+I WNYPF VG
Sbjct: 67 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 126
Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
A+AAGNA++LKPSEV+ + LLA L+ +YMD + VV+G V ET+ LL +++D I YT
Sbjct: 127 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 186
Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
G++ V +IVMAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 187 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 245
Query: 257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
PD+I+ FYG++ +S+D RI+N HF R+ L+D+ KV+
Sbjct: 246 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 303
Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
HGG D++ IAPT+L+DV S +M EEIFGP++PI+ V +E++ IN KPL
Sbjct: 304 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 361
Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
A Y+F+NN+K+ ++ + S+GG+ ND VH+ V +LPFGGV SGMGAYHGK SF+ F
Sbjct: 362 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 421
Query: 437 SHKKAVLSRGFIGDVP--VRYPP 457
SH+++ L + + + RYPP
Sbjct: 422 SHRRSCLVKSLLNEEAHKARYPP 444
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 374 bits (959), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/443 (43%), Positives = 275/443 (62%), Gaps = 13/443 (2%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F+SG+T+ +R+ QL++L +++ E+E ++V AL DL K E + EV +
Sbjct: 24 VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 83
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
I+ +++L W E + + T I EP GVVL+I WNYPF VG
Sbjct: 84 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 143
Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
AIAAGNA+VLKPSE++ +SLLA ++ +Y+D V+ G V ET+ LL +++D I YT
Sbjct: 144 AIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 203
Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
G++ V +I+M AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 204 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVA 262
Query: 257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
PD+I+ FYG++ +S+D RI+++ HF R+ L++ KV+
Sbjct: 263 PDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA-- 320
Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
+GG D IAPT+L DV S +M EEIFGP+LPI+ V +E++ IN KPL
Sbjct: 321 --YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPL 378
Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
A Y+F++N K+ ++ + S+GG+ ND VH+ +HSLPFGGV SGMG+YHGK SF+ F
Sbjct: 379 ALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETF 438
Query: 437 SHKKAVLSRGFIGD--VPVRYPP 457
SH+++ L R + D + VRYPP
Sbjct: 439 SHRRSCLVRPLMNDEGLKVRYPP 461
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 233/447 (52%), Gaps = 17/447 (3%)
Query: 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63
+++ K N + A+ SLF + + FA+ T G+R L+ L + + + + AL
Sbjct: 16 DDDDKHMNYLSPAKIDSLFSAQ-KAYFATRATADVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 64 RQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVV 123
+DL KP+ + E+ + I AL L W+ P + PS +V EP+GV
Sbjct: 75 AEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVT 134
Query: 124 LIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 177
II P+NYP +GAI GN ++KPSE P +S+++ K++ E + V++G
Sbjct: 135 YIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQG 194
Query: 178 AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK P++ +L
Sbjct: 195 GRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQT 254
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIV 296
+++ GK+ N+GQ CI+PD++ Y K L E ++V
Sbjct: 255 VNQLMFGKF-INSGQTCIAPDYL-----YVHYSVKDALLERLVERVKTELPEINSTGKLV 308
Query: 297 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 356
RL LL + G+++ G + D +K ++ T++ V + +MSEE+FGP+LP+
Sbjct: 309 TERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPV 366
Query: 357 LTVDKIEDSFDIIN-SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 415
L D + + D +N KPLA Y+F + + + + + +G +N +H LP
Sbjct: 367 LEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLP 426
Query: 416 FGGVQESGMGAYHGKFSFDVFSHKKAV 442
FGG+ SGMG YHG FS+ F+HKK+V
Sbjct: 427 FGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/447 (32%), Positives = 232/447 (51%), Gaps = 17/447 (3%)
Query: 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63
+++ K N + A+ SLF + + FA+ T G+R L+ L + + + + AL
Sbjct: 16 DDDDKHMNYLSPAKIDSLFSAQ-KAYFATRATADVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 64 RQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVV 123
+DL KP+ + E+ + I AL L W+ P + PS +V EP+GV
Sbjct: 75 AEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVT 134
Query: 124 LIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 177
II P+NYP +GAI GN ++KPSE P +S+++ K++ E + V++G
Sbjct: 135 YIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQG 194
Query: 178 AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK P++ +L
Sbjct: 195 GRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQT 254
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIV 296
+++ GK+ N+GQ I+PD++ Y K L E ++V
Sbjct: 255 VNQLMFGKF-INSGQTXIAPDYL-----YVHYSVKDALLERLVERVKTELPEINSTGKLV 308
Query: 297 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 356
RL LL + G+++ G + D +K ++ T++ V + +MSEE+FGP+LP+
Sbjct: 309 TERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPV 366
Query: 357 LTVDKIEDSFDIIN-SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 415
L D + + D +N KPLA Y+F + + + + + +G +N +H LP
Sbjct: 367 LEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLP 426
Query: 416 FGGVQESGMGAYHGKFSFDVFSHKKAV 442
FGG+ SGMG YHG FS+ F+HKK+V
Sbjct: 427 FGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 206/429 (48%), Gaps = 51/429 (11%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
R + L ++ K + E++ ++ L D KP E+E SI L +K E+
Sbjct: 58 RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEV- 116
Query: 95 HWMTPEKAKTSITTFPSSAEIV---PEPFGVVLIISPWNYPFFVGA------IAAGNALV 145
PS ++ EP G+V I+P+N+P + A IA GN +V
Sbjct: 117 --------------IPSDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIV 162
Query: 146 LKPSEVAPASSSLLAKLVGEYMD-----LSSIRVVEGA--VAETSALLDQKWDKICYTGN 198
PS AP LAK++ + L ++ GA V ++++K + I +TG+
Sbjct: 163 HHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGS 222
Query: 199 SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 258
S+V ++ A + LELGG +P + +L A +I G + GQ CIS
Sbjct: 223 SKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVG 279
Query: 259 HIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLD---DDKVS 314
I+ + A NPL+ K D+ +++ H + K+++ D+
Sbjct: 280 MILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDE--G 337
Query: 315 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 374
GK++ GG+RDK PT+L +V RD+++ E F P++PI+ ++ E+ DI NS
Sbjct: 338 GKLLLGGKRDK--ALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEY 393
Query: 375 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFD 434
L + +FTN+ +F E + GG+VIND+++ ++PFGGV++SG+G K++ +
Sbjct: 394 GLHSAIFTNDINKSLKFAENLEFGGVVINDSSL-FRQDNMPFGGVKKSGLGREGVKYAME 452
Query: 435 VFSHKKAVL 443
S+ K ++
Sbjct: 453 EMSNIKTII 461
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 209/462 (45%), Gaps = 22/462 (4%)
Query: 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
E D A+ R A T S R L+++ + E++P++ D KP
Sbjct: 45 EDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKP- 103
Query: 72 LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
L+ + +++ + + + +KA S+ + ++ EP GVV +I+PWNY
Sbjct: 104 LDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163
Query: 132 PFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSA 184
P + +AAG A +LKPSE+A + L ++ E + + ++ G E A
Sbjct: 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGA 223
Query: 185 LL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMI 242
L DK+ +TG+S +M AAA+ + PV LELGGKSP+V ++L A I
Sbjct: 224 PLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAI 283
Query: 243 MGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHF 301
G + NGQ C + +I + A +PLE L +V+ +
Sbjct: 284 FGCFW-TNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQY 342
Query: 302 ARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL 357
++ K + + K G I+ GG R K I PT++ DV + I EE+FGP+L +
Sbjct: 343 EKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402
Query: 358 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 417
T E++ D+ N L A + +N+ + ++ + AG + +N + P+G
Sbjct: 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCS--QPCFTQAPWG 460
Query: 418 GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRY--PP 457
GV+ SG G G++ D + K V +I + P + PP
Sbjct: 461 GVKRSGFGRELGEWGLDNYLSVKQVTQ--YISEEPWGWYQPP 500
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 167/343 (48%), Gaps = 18/343 (5%)
Query: 115 IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 167
++ EP GVV +I+PWNYP + A+AAG A +LKPSE+A + L ++ E +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 168 DLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
++ ++ G E L DKI +TG+ +M AAA+ + PV LELGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSP 279
Query: 226 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 284
VVFD NL +A + G + N GQ C + +I ++ A
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 285 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVP 339
+PLE L +V++ + ++ K + + K G I+ GGER K + PT++ DV
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
I EE+FGP+L + T E + ++ N L A + + + K ++F + G
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
+ IN + LP+GG + SG G GK+ + F + K V
Sbjct: 459 IWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 169/352 (48%), Gaps = 24/352 (6%)
Query: 118 EPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
EP GV I WNYPF + A +A GNA+V KPS + P + +LA++ E + +
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
+ VV+G AET +LL + K+ +TG+ + VM +AK + V LELGGKSP++
Sbjct: 214 LVNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLI 272
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
L+ A R +M + GQ C + + ++ P +PL
Sbjct: 273 FKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331
Query: 289 SKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE-------RDKNKLRIAPTLLLDVP 339
++ + +++ ++ + K G +++ GGE + KN ++P +L +
Sbjct: 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391
Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
D + EEIFGP++ +L D E+ N+ T LA+ +FT + + + AG
Sbjct: 392 DDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451
Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV 451
IN ++ +PFGG + SG G +G+ + D +S K V+ +GDV
Sbjct: 452 CYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE--MGDV 499
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 192/416 (46%), Gaps = 18/416 (4%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L+++ + E++ V D KP + ++ ++ + + + + + +
Sbjct: 71 RATYLRAIAAKITEKKDHFVKLETIDSGKP-FDEAVLDIDDVASCFEYFAGQAEALDGKQ 129
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPA 154
KA ++ + ++ +P GVV +ISPWNYP + A+AAG VLKPSE+A
Sbjct: 130 KAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASV 189
Query: 155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 211
+ ++ E + + ++ G + A L DKI +TG+S VMA+AA+
Sbjct: 190 TCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQ 249
Query: 212 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXX 271
+ PV LELGGKSP+V +++ I G + NGQ C + ++ + A
Sbjct: 250 LVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFW-TNGQICSATSRLLVHESIAAEFV 308
Query: 272 XXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KN 326
+P E L +++ + ++ K + K G I++GG R K
Sbjct: 309 DKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKK 368
Query: 327 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386
I PT++ D+ I EE+FGP+L + T +++ + N LAA +F+N+ +
Sbjct: 369 GYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLE 428
Query: 387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
++ + + G + +N + P+GG++ SG G G++ + + K V
Sbjct: 429 RCERITKALEVGAVWVNCS--QPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQV 482
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 192/432 (44%), Gaps = 32/432 (7%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESS--IYEVALLKTSIKSALKELKHWMT 98
R L+++ + ER+P++ D KP E++ + +VA + L
Sbjct: 91 RAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEAL----- 145
Query: 99 PEKAKTSITTFPSS---AEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPS 149
+K + S + P + EP GVV +I+PWNYP + A+AAG VLKPS
Sbjct: 146 -DKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPS 204
Query: 150 EVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 206
E+A + LA + E + + +V G + A L DK+ +TG+ + +M
Sbjct: 205 ELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIM 264
Query: 207 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTKD 265
A+AA + PV LELGGKSP+V +++ A + G W NGQ C + ++
Sbjct: 265 ASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFW--TNGQICSATSRLLIHTK 322
Query: 266 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 323
A +PLE L +V+ + ++ K + + K G I+ GG R
Sbjct: 323 IAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 382
Query: 324 D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
+ I PT++ D+ I EE+FGP+L + +++ ++ N LA +
Sbjct: 383 PAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAV 442
Query: 381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 440
+ +++ Q+ E + AG + +N P+GG + SG G G+ D + K
Sbjct: 443 ISGDRERCQRLSEEIDAGCIWVN--CSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVK 500
Query: 441 AVLSRGFIGDVP 452
V +I D P
Sbjct: 501 QVTE--YISDEP 510
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 166/343 (48%), Gaps = 18/343 (5%)
Query: 115 IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 167
++ EP GVV +I+PWNYP + A+AAG A +LKPSE+A + L ++ E +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 168 DLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
++ ++ G E L DKI +TG+ +M AAA+ + PV L LGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSP 279
Query: 226 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 284
VVFD NL +A + G + N GQ C + +I ++ A
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 285 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVP 339
+PLE L +V++ + ++ K + + K G I+ GGER K + PT++ DV
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
I EE+FGP+L + T E + ++ N L A + + + K ++F + G
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
+ IN + LP+GG + SG G GK+ + F + K V
Sbjct: 459 IWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 190/418 (45%), Gaps = 22/418 (5%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R L+++ + E++ ++ D KP LE ++ ++ + + + + +
Sbjct: 74 RARYLRAIAAKIKEKKDELGKLESIDCGKP-LEEALADLDDVVACFEYYAGLAEELDSKQ 132
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPA 154
KA S+ + I+ EP GVV +I+PWNYPF + +AAG A +LKPSE+A
Sbjct: 133 KAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASV 192
Query: 155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAK 211
+ L ++ E + + +V G E A L DKI +TG+S +M AA+
Sbjct: 193 TCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQ 252
Query: 212 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPX 269
+ PV LELGGKSP+V ++L + GC NGQ C + +I + A
Sbjct: 253 LVKPVSLELGGKSPIVVFEDVDLDKVAEWTVF---GCFFTNGQICSATSRLIVHESIAVE 309
Query: 270 XXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKL 328
+PLE L IV+ + ++ + K G + G R L
Sbjct: 310 FVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHL 369
Query: 329 R----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 384
+ + PT++ DV I EE+FGP+L + T E++ ++ N L + + +N+
Sbjct: 370 KKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSND 429
Query: 385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
+ ++ + + AG + IN + P+GG++ SG G G++ + + K V
Sbjct: 430 LERCERLSKALQAGIVWIN--CAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQV 485
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 16/341 (4%)
Query: 115 IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 167
++ EP GVV II+PWN+PF + AI +G +VLKPSE +S LA+L E +
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216
Query: 168 DLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
VV G +L D D + +TG+ RV + AA+ + V LELGGK P
Sbjct: 217 PDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGP 276
Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 285
+ + +L A + G + N GQ CIS ++ + +
Sbjct: 277 QIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGD 335
Query: 286 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLRIAPTLLLDVPRD 341
PL E + ++ H ++ + SG +++ GGER + L APT+ V D
Sbjct: 336 PLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPD 395
Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
I EEIFGP+L LT +++ + N+ L+A +++ N + Q + + AG
Sbjct: 396 XSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455
Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
IN +V LP GG ++SG+G G++ FD +S K V
Sbjct: 456 IN--SVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 183/424 (43%), Gaps = 36/424 (8%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW--MT 98
R++ L+ + + R + +AL D + L ++ E I S L + W +
Sbjct: 52 RITTLQQWKQAILSRREQLTEALVNDTGR--LSITVLE-------IDSFLASIDRWCGLA 102
Query: 99 PEKAKTSI--TTFPSSA---EIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLK 147
PE +TS T+ P A +VP P +V +ISPWN+P + A+ AG A+V+K
Sbjct: 103 PELLQTSAKNTSIPFIALQQSLVPYP--LVGVISPWNFPLTLSXIDTIPALLAGCAVVVK 160
Query: 148 PSEVAPASSSLLAKLVGEYMDLSSIRV-VEGAVAETSALLDQKWDKICYTGNSRVARIVM 206
PSE+AP + L + +L + + VEG ET A L D +C+TG+ R V
Sbjct: 161 PSEIAPRFVAPLLXALNTVPELRDVLIFVEGG-GETGANLINYVDFVCFTGSVATGREVA 219
Query: 207 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTK 264
AA+ P LELGGK P + NL++A ++ WG N GQ+C+S + I +
Sbjct: 220 ETAARRFIPAYLELGGKDPAIVLESANLELATSAIL---WGAVVNTGQSCLSIERIYVAE 276
Query: 265 DYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG-- 321
PL E + I+ ++ + D G ++H G
Sbjct: 277 SKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGK 336
Query: 322 -ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
E PT+ +V + +EE FGP+ P+ +E++ + N L+A +
Sbjct: 337 VEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAV 396
Query: 381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKFSFDVFSHK 439
F ++ + ++AG + IND A+ H SG+G G F K
Sbjct: 397 FAGSEDEALKVARQLNAGAISINDAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRK 456
Query: 440 KAVL 443
+A L
Sbjct: 457 QAFL 460
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 16/336 (4%)
Query: 120 FGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 170
GV I PWN+PFF+ A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 171 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 290
+L++A + ++ + N+GQ C + + K NP E
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 291 DLSR--IVNSNHFARL-SKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 346
D++ ++N+ R+ K+ + ++ GG+ + K PTLLLDV ++ IM
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 406
EE FGP+LP++ D +ED+ + N L + ++T N + + ++ + G IN
Sbjct: 382 EETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINREN 441
Query: 407 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
A+ G ++SG+G GK + + V
Sbjct: 442 FE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 16/336 (4%)
Query: 120 FGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 170
GV I PWN+PFF+ A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 171 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMD 262
Query: 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 290
+L++A + ++ + N+GQ C + + K NP E
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 291 DLSR--IVNSNHFARL-SKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 346
D++ ++N+ R+ K+ + ++ GG+ + K PTLLLDV ++ IM
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 406
EE FGP+LP++ D +ED+ + N L + ++T N + + ++ + G IN
Sbjct: 382 EETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINREN 441
Query: 407 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
A+ G ++SG+G GK + + V
Sbjct: 442 FE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 172/352 (48%), Gaps = 21/352 (5%)
Query: 111 SSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVG 164
+ ++IV EP GVV I+PWNYP A+A G +LV+KPSE+ P ++ + +L+
Sbjct: 162 TESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME 221
Query: 165 EY-MDLSSIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 221
E +I ++ GA +E ++ ++ D + +TG + +M AA ++T + LELG
Sbjct: 222 EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281
Query: 222 GKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXX 280
GK+P ++FD + ++A + + G + + GQ C + I+
Sbjct: 282 GKNPNIIFDDA-DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKK 339
Query: 281 FYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPT 333
N ++ ++ ++++ H ++ +D K G I GG+R D++ L+ PT
Sbjct: 340 IKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPT 399
Query: 334 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 393
++ + I+ EE+FGP++ + + +++ + N LA +F+ + Q+
Sbjct: 400 VITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVAN 459
Query: 394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445
+ G + IND H P+GG ++SG+G GK + + K +L+
Sbjct: 460 KLKLGTVWIND--FHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTN 509
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 181/418 (43%), Gaps = 29/418 (6%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP-ELESSIYEVALLKTSIKSALKELKHWMTP 99
R + L ++K R+ DIV A+ +L P L ++ L + +A L ++
Sbjct: 69 RQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLNHFV-AARDALDNYEFE 127
Query: 100 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAP 153
E+ + +V E GV +I+PWN+P A AAG+ +VLKPSE P
Sbjct: 128 ERRGDDL--------VVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 154 ASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA 210
++ +LA++ + + +V G A L + K +TG+ + AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA 239
Query: 211 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXX 270
K V LELGGKSP + +++K A + GK N GQ C + ++
Sbjct: 240 KDFKKVSLELGGKSPYIVLDDVDIKEAAK-ATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 271 XXXXXXXXXXFYGKNPLES-KDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKL 328
NP E + I++ F ++ ++ G ++ +GG L
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGL 358
Query: 329 RIA----PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 384
PT+ ++V I EEIFGP+ ++T + ++++ I N LA Y+ +
Sbjct: 359 EKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKD 418
Query: 385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
K+ + ++ AG + IN+ LPFGG ++SG+G G + + F K++
Sbjct: 419 KETLHKVARSIEAGTVEINEAGRK---PDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 185/448 (41%), Gaps = 31/448 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
PWN+P + A +A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
+ + N GQ C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
IL IE+ N+ T LAA +FT + + + AG + +N V A
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
PFGG + SG G G++ ++ K V
Sbjct: 464 PFGGYKMSGSGQELGEYGLQAYTEVKTV 491
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 185/448 (41%), Gaps = 31/448 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
PWN+P + A +A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
+ + N GQ C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
IL IE+ N+ T LAA +FT + + + AG + +N V A
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
PFGG + SG G G++ ++ K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 150/339 (44%), Gaps = 17/339 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
EP GVV I WN P F+ A+ AG +VLKP+ P +++ LA++ E +
Sbjct: 145 EPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEG 204
Query: 171 SIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
+ VV G + AL + D +TG+S V R V AA+ L P LELGGKS +
Sbjct: 205 VLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIIL 264
Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLE 288
++L A M+ N GQ C++ I+ + Y G
Sbjct: 265 EDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDP 323
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK---NKLRIAPTLLLDVPRDSLI 344
+ + +++ R+ + G ++V GG R + N I PT+ DV I
Sbjct: 324 AAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTI 383
Query: 345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 404
EEIFGP+L I+ D ED+ I N LA ++T + + + + G IN
Sbjct: 384 AQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINW 443
Query: 405 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
A PFGG + SG+G +G + F+ +K+VL
Sbjct: 444 YAFD---PGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 155/336 (46%), Gaps = 16/336 (4%)
Query: 120 FGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 170
GV I PWN+PFF+ A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 171 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 290
+L++A + ++ + N+GQ C + + K NP E
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 291 DLSR--IVNSNHFARL-SKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 346
D++ ++N+ R+ K+ + ++ GG+ + K PTLLLDV ++ IM
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 406
EE FGP+LP++ D +E++ + N L + ++T N + + ++ + G IN
Sbjct: 382 EETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINREN 441
Query: 407 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
A+ G ++SG+G GK + + V
Sbjct: 442 FE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 185/448 (41%), Gaps = 31/448 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 49 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 104
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 105 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 160
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
PWN+P + A +A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 161 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 220
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 221 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 280
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
+ + N GQ C + +D NP +SK + V
Sbjct: 281 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 339
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 340 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 399
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
IL IE+ N+ T LAA +FT + + + AG + +N V A
Sbjct: 400 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 457
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
PFGG + SG G G++ ++ K V
Sbjct: 458 PFGGYKMSGSGRELGEYGLQAYTEVKTV 485
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 191/431 (44%), Gaps = 39/431 (9%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
R S L+ ++ + + D+ + + KP E+ S + + + ++
Sbjct: 72 RSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDII 131
Query: 95 HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKP 148
H TP K + ++ ++ +P GV +I+PWN+P + A+AAG +V+KP
Sbjct: 132 H--TPAKDRRAL--------VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 149 SEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRV 201
+E P S+ LA+L G Y + R V E + D KI +TG++
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTT 240
Query: 202 ARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 260
+I++ AA + V +ELGG +P +VFDS N+ A + K+ N GQ C+ +
Sbjct: 241 GKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQF 298
Query: 261 ITTKDY--APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KI 317
+ + A G E ++N ++ K ++D G +
Sbjct: 299 LVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATV 358
Query: 318 VHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
V GG+R + K PTLL +V +D L EE FGPL P++ D E++ I N+ L
Sbjct: 359 VTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGL 418
Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
A Y ++ + + E + G + +N+ + PFGGV++SG+G K+ D +
Sbjct: 419 AGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEY 476
Query: 437 SHKKAVLSRGF 447
K V G
Sbjct: 477 LELKYVCYGGL 487
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 184/448 (41%), Gaps = 31/448 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
PWN+P + A +A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
A + + DK+ + G++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
+ + N GQ C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
IL IE+ N+ T LAA +FT + + + AG + +N V A
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
PFGG + SG G G++ ++ K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 186/448 (41%), Gaps = 31/448 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
PWN+P + A +A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
A + + DK+ +TG++ + R++ +AA + +L V L+LGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
+ + N GQ+C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
IL IE+ N+ T LAA +FT + + + AG + +N V A
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
PFGG + SG G G++ ++ K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 181/416 (43%), Gaps = 24/416 (5%)
Query: 39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98
GWR+ K +L R D+V A DL +A K I A ++ W
Sbjct: 65 GWRMKTAKERAAILR-RWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIE-WFA 122
Query: 99 PEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLK 147
E + + T P+ +V EP GV I+PWN+P VG A+AAG +V+K
Sbjct: 123 EEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVK 182
Query: 148 PSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARI 204
P+E P S+ + LA+ G + S+ + + T + K+ +TG++ V R+
Sbjct: 183 PAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRL 242
Query: 205 VMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IIT 262
+MA +A + + LELGG +P +VFD +L A I K+ NNGQ C+ + +
Sbjct: 243 LMAQSAPTVKKLTLELGGNAPFIVFDDA-DLDAAVEGAIASKY-RNNGQTCVCTNRFFVH 300
Query: 263 TKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 321
+ Y G+ L ++N ++ + D G ++ GG
Sbjct: 301 ERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGG 360
Query: 322 ERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
+R PT+L V D + EE FGPL P+ E+ + N LAAYL
Sbjct: 361 KRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYL 420
Query: 381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
++ + + E + G + IN + V PFGGV++SG+G + D +
Sbjct: 421 YSRDIGRVWRVAEALEYGMVGINTGLISNEVA--PFGGVKQSGLGREGSHYGIDDY 474
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 182/442 (41%), Gaps = 31/442 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
PWN+P + A +A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
+ + N GQ C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
IL IE+ N+ T LAA +FT + + + AG + +N V A
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVF 436
PFGG + SG G G++ +
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAY 485
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 184/448 (41%), Gaps = 31/448 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
PWN+P + A +A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
+ + N GQ + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
IL IE+ N+ T LAA +FT + + + AG + +N V A
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
PFGG + SG G G++ ++ K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 190/431 (44%), Gaps = 39/431 (9%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
R S L+ ++ + + D+ + + KP E+ S + + + ++
Sbjct: 72 RSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDII 131
Query: 95 HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKP 148
H TP K + ++ ++ +P GV +I+PWN+P + A+AAG +V+KP
Sbjct: 132 H--TPAKDRRAL--------VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 149 SEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRV 201
+E P S+ LA+L G Y + R V E + D KI +TG++
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTT 240
Query: 202 ARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 260
+I++ AA + V +ELGG +P +VFDS N+ A + K+ N GQ + +
Sbjct: 241 GKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTAVCSNQF 298
Query: 261 ITTKDY--APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KI 317
+ + A G E ++N ++ K ++D G +
Sbjct: 299 LVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATV 358
Query: 318 VHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
V GG+R + K PTLL +V +D L EE FGPL P++ D E++ I N+ L
Sbjct: 359 VTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGL 418
Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
A Y ++ + + E + G + +N+ + PFGGV++SG+G K+ D +
Sbjct: 419 AGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEY 476
Query: 437 SHKKAVLSRGF 447
K V G
Sbjct: 477 LELKYVCYGGL 487
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
EP GVV I WNYP + A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
+ V+ G+ E L + +KI +TG + + VMA+A+ L V +ELGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 259
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+L A +M + ++GQ C + + + +P
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 379 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 438
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 439 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 184/448 (41%), Gaps = 31/448 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
PWN+P + A +A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
+ + N GQ + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
IL IE+ N+ T LAA +FT + + + AG + +N V A
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
PFGG + SG G G++ ++ K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
EP GVV I WNYP + A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
+ V+ G+ E L + +KI +TG + + VMA+A+ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+L A +M + ++GQ C + + + +P
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 440 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 187/444 (42%), Gaps = 33/444 (7%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DLDKPELESS 75
VK R F G WR ++LN ER+ + AL D KP + S
Sbjct: 62 VKAARAAFQLGSP----WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISY 117
Query: 76 IYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFV 135
+ ++ + + L+ W KT + EP GV I PWN+P +
Sbjct: 118 LVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLM 173
Query: 136 GA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL-- 186
A +A GN +V+K +E P ++ +A L+ E + V+ G A +
Sbjct: 174 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIAS 233
Query: 187 DQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 245
+ DK+ +TG++ V ++ AA K +L V LE+GGKSP + S ++ A +
Sbjct: 234 HEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFAL 293
Query: 246 WGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFAR 303
+ N GQ C + +D YA G NP +S+ + V+ F +
Sbjct: 294 F-FNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVG-NPFDSRTEQGPQVDETQFKK 351
Query: 304 LSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 361
+ + K G K++ GG ++ I PT+ D+ I EEIFGP++ IL
Sbjct: 352 VLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKS 411
Query: 362 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 421
+E+ N+ LAA +FT + + + AG + +N V A PFGG +
Sbjct: 412 MEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKL 469
Query: 422 SGMGAYHGKFSFDVFSHKKAVLSR 445
SG G G++ ++ K V R
Sbjct: 470 SGSGRELGEYGLQAYTEVKTVTVR 493
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 157/339 (46%), Gaps = 19/339 (5%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
P GV + I WNYP + A+ AGNA+V KPSE P + +A+++ E +
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL 209
Query: 172 IRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
V++G +T LL D K+ TG+ R V AAAA HL V +ELGGKSP++
Sbjct: 210 FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268
Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE- 288
+++ A ++G + ++GQ C + + K +PL+
Sbjct: 269 DDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDY 327
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKN----KLRIAPTLLLDVPRDSL 343
+ L +V+ ++ ++ K G ++ GG N + PT+ DV D
Sbjct: 328 ATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMT 387
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
I EEIFGP++ +L D ++ N+ LA +FT + + V+ + AG L IN
Sbjct: 388 IAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWIN 447
Query: 404 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
+L +PFGG ++SG G + + + +S K V
Sbjct: 448 --TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 154/342 (45%), Gaps = 23/342 (6%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
P GVV+ I+ WN+P + A+ GN +VLKP++ P +++ L ++ E +
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207
Query: 172 IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
+ V+ G + L + I TG++ + + +A+++TPV+LELGGK+P+V
Sbjct: 208 LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVM 267
Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLES 289
+L A + G++ N GQ C + + +P+++
Sbjct: 268 DDADLDKAAEDALWGRFA-NCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDA 326
Query: 290 -KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG------ERDKNKLRIAPTLLLDVPRDS 342
+ N + ++ + G V G E + PT+L+DV +D+
Sbjct: 327 DSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDN 386
Query: 343 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 402
+++ EE FGP+LPI+ V +E + + N L+AY+ T + Q + + G + I
Sbjct: 387 IVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYI 446
Query: 403 ND--TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
N H H+ G ++SG G GKF + + KK V
Sbjct: 447 NRGMGEQHQGFHN----GWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 206/465 (44%), Gaps = 45/465 (9%)
Query: 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVD--- 61
EE + E D E VK R F G WR ++LN + D+++
Sbjct: 46 EEKLCEVEEGDKEDVDKAVKAARQAFQIGSP----WRTMDASERGRLLN-KLADLIERDR 100
Query: 62 ---ALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKT-----SITTFPSSA 113
A + ++ +L S+ Y + L IK+ L+ W + +T + T+ S
Sbjct: 101 LLLATMEAMNGGKLFSNAY-LMDLGGCIKT-LRYCAGWADKIQGRTIPMDGNFFTYTRS- 157
Query: 114 EIVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY- 166
EP GV I PWN+P + A++ GN +V+KP+E P ++ + L+ E
Sbjct: 158 ----EPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAG 213
Query: 167 MDLSSIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELG 221
+ +V G A A S+ +D DK+ +TG++ V +++ AA K +L V LELG
Sbjct: 214 FPPGVVNIVPGYGPTAGAAISSHMDV--DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELG 271
Query: 222 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXF 281
GKSP + + +L A G + + GQ CI+ + + +
Sbjct: 272 GKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 282 YGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLD 337
NPL + +S+ ++ + ++ L++ K G K+ GG NK I PT+ D
Sbjct: 331 VLGNPL-TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSD 389
Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
V D I EEIFGP+ I+ ++D N+ L+A +FTN+ + +
Sbjct: 390 VTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQS 449
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
G + +N +V A PFGG + SG G G++ F ++ K V
Sbjct: 450 GTVWVNCYSVVSA--QCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
EP GVV I WNYP + A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
+ V+ G+ E L + +KI +TG + + VMA+A+ L V + LGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLI 259
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+L A +M + ++GQ C + + + +P
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 379 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 438
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 439 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 181/442 (40%), Gaps = 31/442 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
PWN+P + A +A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
+ + N GQ + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
IL IE+ N+ T LAA +FT + + + AG + +N V A
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVF 436
PFGG + SG G G++ +
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAY 485
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 163/374 (43%), Gaps = 36/374 (9%)
Query: 95 HWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFFV------GAIAAGNA 143
W E + T P+ ++ +P GV I+PWN+P + A+AAG
Sbjct: 139 EWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCT 198
Query: 144 LVLKPSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGN 198
++++P+++ P ++ +LA+ G + +++V G E A L + K+ +TG+
Sbjct: 199 MIVRPADLTPLTALALGVLAEKAG--IPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGS 256
Query: 199 SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 258
+ V R++MA A + + LELGG +P + +L A ++ K+ N GQ C+ +
Sbjct: 257 TEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYR-NAGQTCVCAN 315
Query: 259 HIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-K 316
I + Y G + ++ ++ ++D G K
Sbjct: 316 RIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAK 375
Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
++ GG ++ L P +L V D L+ EE FGPL P+ D E+ N L
Sbjct: 376 LITGG-KELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGL 434
Query: 377 AAYLFTNNKKLKQQFVETVSAG------GLVINDTAVHLAVHSLPFGGVQESGMGAYHGK 430
AAY +T N + E + G GL+ N+ A PFGGV++SG+G K
Sbjct: 435 AAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVA--------PFGGVKQSGLGREGSK 486
Query: 431 FSFDVFSHKKAVLS 444
+ + + K + S
Sbjct: 487 YGIEEYLETKYICS 500
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 18/328 (5%)
Query: 119 PFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
P GV + ISPWN+ V I GN +VLKP+ P ++ +++ + +
Sbjct: 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV 231
Query: 172 IRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGK 223
I V G+ AE L+D K I +TG+ V + AA HL V++E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 224 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYG 283
VV D +L +A +++ +G + GQ C + + KD
Sbjct: 292 DTVVVDRDADLDLAAESILVSAFGFS-GQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350
Query: 284 KNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 341
+P + + +++ F ++ ++ K G+++ GGE D + I PT++ D+ +
Sbjct: 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPE 410
Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
++IM EEIFGP++ + + + +I N+ L + T N+ +Q G L
Sbjct: 411 AVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLY 470
Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHG 429
N V PFGG + SG + G
Sbjct: 471 FNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
EP GVV I WNYP + A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
+ V+ G+ E L + +KI +TG + + VMA+A+ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+L A +M + ++GQ + + + +P
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 440 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 186/419 (44%), Gaps = 41/419 (9%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L++ ++ E + D+ + + KP L + E++ + I+ W E
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKP-LAEAKGEISYAASFIE--------WFAEE 121
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKPS 149
+ T P ++ +P GV I+PWN+P + A+AAG +VLKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 150 EVAPASSSLLAKL-VGEYMDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 206
P S+ LA+L + + VV G+ L K+ +TG++ + R +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 207 AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 265
AK + V LELGG +P +VFD +L A + K+ N GQ C+ + +
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDG 299
Query: 266 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG-- 321
+ + L++ + +++ A++ + + D G ++V GG
Sbjct: 300 VYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA 359
Query: 322 -ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPLA 377
ER N + PT+L+DVP ++ + EE FGPL P+ + +D D+I N LA
Sbjct: 360 HERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLA 414
Query: 378 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
AY + + + E + G + IN + V PFGG++ SG+G K+ + +
Sbjct: 415 AYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 186/419 (44%), Gaps = 41/419 (9%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L++ ++ E + D+ + + KP L + E++ + I+ W E
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKP-LAEAKGEISYAASFIE--------WFAEE 121
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKPS 149
+ T P ++ +P GV I+PWN+P + A+AAG +VLKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 150 EVAPASSSLLAKL-VGEYMDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 206
P S+ LA+L + + VV G+ L K+ +TG++ + R +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 207 AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 265
AK + V LELGG +P +VFD +L A + K+ N GQ C+ + +
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDG 299
Query: 266 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG-- 321
+ + L++ + +++ A++ + + D G ++V GG
Sbjct: 300 VYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA 359
Query: 322 -ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPLA 377
ER N + PT+L+DVP ++ + EE FGPL P+ + +D D+I N LA
Sbjct: 360 HERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLA 414
Query: 378 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
AY + + + E + G + IN + V PFGG++ SG+G K+ + +
Sbjct: 415 AYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
EP GVV I WNYP + A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
+ V+ G+ E L + +KI +TG + + VMA+A+ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+L A +M + ++GQ + + + +P
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 440 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 26/337 (7%)
Query: 114 EIVPEPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY- 166
+ V P GV ++I PWN+ F + A I GN +VLKP+ AP ++ +++ E
Sbjct: 167 QYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESG 226
Query: 167 MDLSSIRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAAK------HLTPVLL 218
+ + V G+ AE L+D K I +TG+ V + AAK HL V+
Sbjct: 227 LPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIA 286
Query: 219 ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPXXXXXXXXX 277
E+GGK VV D ++++A + + +G GQ C + ++ K Y
Sbjct: 287 EMGGKDTVVVDEDCDIELAAQSIFTSAFGFA-GQKCSAGSRAVVHEKVYDEVLKRVIEIT 345
Query: 278 XXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLL 336
G+ + +++ F ++ ++ K G++V GG+ D +K I PT+
Sbjct: 346 ESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYFIEPTIFA 405
Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK----KLKQQFV 392
D+ + +M EEIFGP++ V +++ ++ N+ L + T N+ + KQ+F
Sbjct: 406 DLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEF- 464
Query: 393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 429
G L N V PFGG + SG + G
Sbjct: 465 ---HVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 150/335 (44%), Gaps = 14/335 (4%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
EP G+VL ISP+NYP + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
+ G +E + Q + I +TG++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
+L++ + +I G +G + GQ C + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 348
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 349 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 408
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 409 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
+ PF G ++SG G K+S + + K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 149/337 (44%), Gaps = 20/337 (5%)
Query: 118 EPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
+P GVV I+PWNYP + A +AAGN +VLKPSE+ P ++ LA+L +
Sbjct: 158 DPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGV 217
Query: 172 IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-VF 228
+ ++ G L K + TG+ +++ A + +ELGGK+PV VF
Sbjct: 218 VNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVF 277
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPL 287
D V G + N GQ C + I K Y G
Sbjct: 278 DDADIEAVVEGVRTFGYY--NAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDD 335
Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDK-NKLRIAPTLLLDVPRDSLI 344
ES +L + + H R+ K +++ K +G K++ GGE+ K N APTLL +D I
Sbjct: 336 ESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAI 395
Query: 345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 404
+ +E+FGP++ + D E + N LA+ ++T + + + G +N
Sbjct: 396 VQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNT 455
Query: 405 TAVHLAVHSLPFGGVQESGMG---AYHGKFSFDVFSH 438
+ V +P GG + SG G + +G + V H
Sbjct: 456 H--FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRH 490
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 28/346 (8%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 171
P G V II+PWN P + A+A GN +VLKP+E +P +++ LA+++ E DL
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKE-ADLPPG 220
Query: 172 -IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
+V+G E A L + TG + +IVM AA HL + ELGGKSP +
Sbjct: 221 VFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALV 280
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
+ +L+ A ++ + NG+ C + ++ + +PL+
Sbjct: 281 FADADLERALDAVVFQIFSF-NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLD 339
Query: 289 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---------IAPTLLLD 337
+ ++ +++ H R+ ++ K G +++ GGER K R + PT+ +
Sbjct: 340 PETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG 399
Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
I EEIFGP+L + E++ N LAAY+FT + + + + A
Sbjct: 400 -ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEA 458
Query: 398 GGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
G + +N V HL PFGGV+ SG G ++ D ++ K +
Sbjct: 459 GMVYLNSHNVRHLPT---PFGGVKGSGDRREGGTYALDFYTDLKTI 501
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 14/335 (4%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
EP G+VL ISP+NYP + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
+ G +E + Q + I ++G++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
+L++ + +I G +G + GQ C + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 348
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 349 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 408
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 409 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
+ PF G ++SG G K+S + + K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 149/335 (44%), Gaps = 14/335 (4%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
EP G+VL ISP+NYP + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
+ G +E + Q + I +TG++ + + A + P++L LGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLALGGKDSAIV 259
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
+L++ + +I G +G + GQ C + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 348
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 349 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 408
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 409 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
+ PF G ++SG G K+S + + K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 149/339 (43%), Gaps = 18/339 (5%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
EP GV I PWN+P + A+ GN +V+KP+E P S+ + L+ E
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPG 215
Query: 171 SIRVVEGAVAETSALLDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 227
+ ++ G A + DKI +TG++ V +++ AA + +L V LELGGKSP +
Sbjct: 216 VVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNI 275
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 286
+ +L A + G + N GQ C + I + Y G
Sbjct: 276 IFADADLDYAVEQAHQGVF-FNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPF 334
Query: 287 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLI 344
+ + ++ + ++ +L+ G + G + + I PT+ +V D I
Sbjct: 335 DPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 394
Query: 345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 404
EEIFGP+ IL +++ + N+ L A +FTN+ + AG + IN
Sbjct: 395 AKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWIN- 453
Query: 405 TAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
+ A+++ PFGG + SG G G+F +S K V
Sbjct: 454 --CYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTV 490
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 149/335 (44%), Gaps = 14/335 (4%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
EP G+VL ISP+NYP + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
+ G +E + Q + I +TG++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
+L++ + +I G +G + GQ + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGYS-GQRSTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 348
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 349 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 408
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 409 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
+ PF G ++SG G K+S + + K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 199/453 (43%), Gaps = 47/453 (10%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
DA+ A + + F + KT S R+ ++ ++++ +R D+ + ++ P +
Sbjct: 64 DADKA---INAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMA 120
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF- 133
+ A + I++ +K K + E ++ A + + GVV +I+PWN+P
Sbjct: 121 LNAQTATGSSHIRNFIKAYKEFSFQE----ALIEGNEQAILHYDAIGVVGLITPWNWPMN 176
Query: 134 -----FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI-RVVEGAVAETSALLD 187
+ A+ AG +VLKPSE+AP S+ L A+++ E S + ++ G A + L
Sbjct: 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLS 236
Query: 188 QKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGK-SPVVF-DSGIN-LKVACRRMI 242
D I +TG++R + + A+ L V LELGGK + ++F D+ I+ L+ R
Sbjct: 237 AHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCF 296
Query: 243 MGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF 301
N+GQ+C +P ++ + Y G + +V+ +
Sbjct: 297 Y-----NSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQY 351
Query: 302 ARLSKLLDDDKVSG-KIVHGG-------ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPL 353
++ L+ G +V GG ER + PT+ DV I EEIFGP+
Sbjct: 352 DKIQDLIQSGIDEGATLVTGGTGLPMGMERG---YYVRPTVFADVKPHMRIFREEIFGPV 408
Query: 354 LPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 413
L +L + +++ + N L Y+ + ++ ++ V +G + +N H
Sbjct: 409 LSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-------HE 461
Query: 414 LP----FGGVQESGMGAYHGKFSFDVFSHKKAV 442
LP FGGV+ SG G + F KA+
Sbjct: 462 LPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 152/346 (43%), Gaps = 22/346 (6%)
Query: 119 PFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
P G ++I+PWN+P VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 172 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 222
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 281
K+ ++ D + +A +++ +G GQ C + +I T+ Y P
Sbjct: 292 KNAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 282 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPR 340
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+ +VP
Sbjct: 351 VGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP 409
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
+ I EEIFGP+L ++ V ++ ++ N L +++ ++ + G L
Sbjct: 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 445
N V PFGG + SG A G + +F KAV R
Sbjct: 470 YFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 22/346 (6%)
Query: 119 PFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
P G ++I+PWN+P VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 172 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 222
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 281
K ++ D + +A +++ +G GQ C + +I T+ Y P
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 282 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPR 340
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+ +VP
Sbjct: 351 VGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP 409
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
+ I EEIFGP+L ++ V ++ ++ N L +++ ++ + G L
Sbjct: 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 445
N V PFGG + SG A G + +F KAV R
Sbjct: 470 YFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 22/341 (6%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
EP GV +I PWN P + A+ GN +++KP+E P ++ +A L+ E
Sbjct: 158 EPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPG 217
Query: 171 SIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP 225
+ +V G A A S+ +D DK+ +TG++ V +++ AAAK +L V LELG K+P
Sbjct: 218 VVNIVPGYGPTAGAAISSHMDV--DKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNP 275
Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 285
+ + +L A G + N GQ+CI+ + + + N
Sbjct: 276 CIVFADADLDSAVEFAHQGVF-TNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGN 334
Query: 286 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 342
PL + +N ++ +L++ K G K+ GG NK I PT+ +V D
Sbjct: 335 PLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDM 394
Query: 343 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 402
I EEIFGP+ I+ +++ N+ L A +FT + + AG + +
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWV 454
Query: 403 NDTAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
N +LA + P GG + SG G G++ ++ K V
Sbjct: 455 N---CYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTV 492
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 148/345 (42%), Gaps = 20/345 (5%)
Query: 119 PFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
P G ++I+PWN+P VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 172 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 222
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFY 282
K ++ D + +A +++ +G + + I+T Y P
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSV 351
Query: 283 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRD 341
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+ +VP
Sbjct: 352 GPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
+ I EEIFGP+L ++ V ++ ++ N L +++ ++ + G L
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 445
N V PFGG + SG A G + +F KAV R
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 178/407 (43%), Gaps = 25/407 (6%)
Query: 34 KTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93
K + RV L + +L ER+ I + + ++ KP+ +S+I EV+ I+ E
Sbjct: 66 KIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPK-KSAIGEVSRTADIIRHTADEA 124
Query: 94 KHWMTPEKAKTSITTFPSSAEIV---PEPFGVVLIISPWNYPFFVGA------IAAGNAL 144
+ E K SS +I EP GVVL ISP+NYP + A + GN +
Sbjct: 125 LR-LNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183
Query: 145 VLKPSEVAPASSSLLAKLVGEYMDLSS----IRVV--EGAVAETSALLDQKWDKICYTGN 198
V KP+ S K+V D + I+VV G+V + D I +TG
Sbjct: 184 VFKPATQGSLSG---IKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGG 240
Query: 199 SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 258
+ + A + PV+LELGGK P + +LK+ +++ G + + GQ C +
Sbjct: 241 TTTGERISEKA--KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYS-GQRCTAIK 297
Query: 259 HIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIV 318
+ A +P + D++ +++ A + L+DD +G +
Sbjct: 298 RVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATL 357
Query: 319 HGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 378
G + + L ++PTLL DV + EE FGP+LPI+ V ++ + N L A
Sbjct: 358 LSGNKRQGNL-LSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQA 416
Query: 379 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
+FT + + + G + IN H PF GV++SG+G
Sbjct: 417 SIFTKDTDRAINIGKHLEVGTVHINAKTERGPDH-FPFLGVKKSGLG 462
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 173/429 (40%), Gaps = 29/429 (6%)
Query: 30 FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
F K S R L+ + + L + + ++ KP ++ + EV KSA
Sbjct: 42 FKKWKXTSVAQRAQTLRDIGQALRAHAEEXAQCITREXGKP-IKQARAEV------TKSA 94
Query: 90 LKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFF------VGAI 138
L W E + P+ E I P GV+L I PWN+P + V +
Sbjct: 95 --ALCDWYA-EHGPAXLNPEPTLVENQQAVIEYRPLGVILAIXPWNFPLWQVLRGAVPIL 151
Query: 139 AAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAE--TSALLDQKWDKICYT 196
AGN+ +LK + + +A+++ E + + A E + + D + + T
Sbjct: 152 LAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYGWVNANNEGVSQXINDPRIAAVTVT 211
Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
G+ R + A A L +LELGG P + + +L++A + + G++ N GQ C +
Sbjct: 212 GSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ-NTGQVCAA 270
Query: 257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG 315
I + A +PL E DL + L + + G
Sbjct: 271 AKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEG 330
Query: 316 -KIVHGGERDKNKLRI-APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 373
+++ GGE+ + A T+L DV D +E+FGP+ I + + N
Sbjct: 331 ARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSE 390
Query: 374 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 433
L+A +FT + L + + GG+ IN + A + FGGV++SG G F
Sbjct: 391 FGLSATIFTADDTLAAEXAARLECGGVFINGYSASDA--RVAFGGVKKSGFGRELSHFGL 448
Query: 434 DVFSHKKAV 442
F + + V
Sbjct: 449 HEFCNVQTV 457
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 153/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
EP GV I+ PWNYP + +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+ +L A +M M N G+ CI+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 157/333 (47%), Gaps = 16/333 (4%)
Query: 121 GVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--I 172
GVV +ISPWN+P + A+A GNA+V+KP+ P + ++ + E + + I
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 173 RVVEGAVAETS-ALLDQKWDK-ICYTGNSRVARIV--MAAAAKHLTPVLLELGGKSPVVF 228
V GA +E + K I +TG++ V R V +A + V LELGG +P V
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVV 269
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP-L 287
+ ++ A + +G + + GQ C+S + +I +P
Sbjct: 270 LADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSA 328
Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 347
E + ++N + + L + ++ K G V + +L + P + DV D I E
Sbjct: 329 EGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL-VHPHVFSDVTSDMEIARE 387
Query: 348 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 407
EIFGPL+ +L D + ++ N+ L+A +++ + QF + +G + IND V
Sbjct: 388 EIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTV 447
Query: 408 HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 440
+ H + FGG + SG+G ++G ++ + F+ +
Sbjct: 448 NDEPHVM-FGGSKNSGLGRFNGDWAIEEFTTDR 479
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
EP GV I+ PWNYP + +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L+LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+ +L A +M M N G+ CI+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 29/339 (8%)
Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPAS 155
P++ E +P +P G+V I+PWNYP AI GN +V KPSE P +
Sbjct: 144 PAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLT 203
Query: 156 SSLLAKLVGEYMDLSSIRVVEGAVAET--SALLDQ-KWDKICYTGNSRVARIVMAAAAKH 212
+ LA+L+ + + + V+ G ET +AL++ K + TG+ + V+AAAAK
Sbjct: 204 ALKLARLIADILPEGVVNVITGR-GETVGNALINHPKVGXVSITGDIATGKKVLAAAAKT 262
Query: 213 LTPVLLELGGKSPVVFDSGINLKVACRRM-IMGKWGCNNGQACISPDHIITTKD-YAPXX 270
+ LELGGK+PV+ +L+ + G + N GQ C + I Y
Sbjct: 263 VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYY--NAGQDCTAACRIYAEAGIYEKLV 320
Query: 271 XXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDD--DKVSGKIVHGGERDKNK- 327
Y + ++ +++ R++ ++ D+ +I GG ++
Sbjct: 321 ADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEG 380
Query: 328 LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387
PT++ ++ I+ E+FGP++ + +D+ N LA+ ++T +
Sbjct: 381 FFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISK 440
Query: 388 KQQFVETVSAGGLVINDTAVHLAV-HSLPFGGVQESGMG 425
+ + G IN H + + P GG+++SG G
Sbjct: 441 AXRAASRLQYGCTWIN---THFXLTNEXPHGGIKQSGYG 476
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
EP GV I+ PWNYP + +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+ +L A +M M N G+ CI+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
EP GV I+ PWNYP + +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+ +L A +M M N G+ I+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
EP GV I+ PWNYP + +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+ +L A +M M N G+ I+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 171/424 (40%), Gaps = 29/424 (6%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP--ELESSIYEVALLKTSIKSALKELKHWMT 98
R L+ + L E +I L + KP E + + A + L
Sbjct: 73 RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTI 132
Query: 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLK---PSEVAPAS 155
PEK K T + P GV +I PWN+P +G IA + L PS + PAS
Sbjct: 133 PEKPKDCTWT------VHYRPVGVTGLIVPWNFP--IGXIAKKLSAALAAGCPSVIKPAS 184
Query: 156 SSLLAKL----VGEYMDL--SSIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMA 207
+ L + V + +DL + +V G + +L + D + +TG++ V R ++
Sbjct: 185 ETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIV 244
Query: 208 AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 267
A+ + + LELGG +P + +L+ A +I K+ GQ C+ + I + A
Sbjct: 245 DTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFR-GGGQTCVCANRIFVHEKVA 303
Query: 268 PXXXXXXXXXXXXF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK- 325
G + D+ ++N F ++ + L D G + G++
Sbjct: 304 DAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE 363
Query: 326 --NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 383
+ L PT++ V R+ EE FGPL+P E+ D N LA+Y+FT
Sbjct: 364 LGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTA 423
Query: 384 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
+ + Q+ + G + N PFGG + SG+G G F + V
Sbjct: 424 DAERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV- 480
Query: 444 SRGF 447
RGF
Sbjct: 481 PRGF 484
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
EP GV I+ PWNYP + +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
+ +L A +M M N G+ I+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 192/442 (43%), Gaps = 38/442 (8%)
Query: 24 KELRGTFASGKTKSYGW-------RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI 76
K+L F + W R + L+ L+E DI+ + ++ ++S+I
Sbjct: 44 KQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI 103
Query: 77 YEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNY 131
++ + L MT + PS E I P GV+ ISP+N+
Sbjct: 104 --------ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNF 155
Query: 132 PFFVG------AIAAGNALVLKPS-EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAET 182
P + AIA GN++V KP + A + +++AK E+ L + + V+ V E
Sbjct: 156 PMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAF-EHAGLPAGVLNVMLTDVKEI 214
Query: 183 -SALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRR 240
+L + I +TG++ V R + A + + LELGG +P S ++ A
Sbjct: 215 GDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDA 274
Query: 241 MIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSN 299
I GK+ + GQ C+ + II +D Y YG + ++N
Sbjct: 275 AIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINER 333
Query: 300 HFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 358
+ ++++ K G ++ G+R N L P + + +S I E+F P+ I+
Sbjct: 334 QIEKALEIIEQAKTDGIELAVEGKRVGNVL--TPYVFVGADNNSKIAQTELFAPIATIIK 391
Query: 359 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 418
+++ D+ N L++ +FT++ + ++F + +G +ND +V+ + ++ FGG
Sbjct: 392 AGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDS-PNIAFGG 450
Query: 419 VQESGMGAYHGKFSFDVFSHKK 440
+ SG+G + + + F+ K
Sbjct: 451 NKASGVGRFGNPWVVEEFTVTK 472
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 16/341 (4%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
P GVV I+P+N+P V AIA GN +LKPSE P + L +L + +
Sbjct: 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGV 200
Query: 172 IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230
VV GA + +L+ K I + G+ V V +++L V G K+ + +
Sbjct: 201 FNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLN 260
Query: 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 290
NL+ ++ +G + G+ C++ + + A N L+
Sbjct: 261 DANLEDTVTNIVGAAFG-SAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDG 319
Query: 291 D-LSRIVNSNHFAR-LSKLLDDDKVSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMS 346
L ++ ++ R LS + + ++V G + + + PT+ +V + I
Sbjct: 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWK 379
Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 406
+EIF P+L ++ V ++++ +I N A LFT+N + F E + AG L IN
Sbjct: 380 DEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN-LG 438
Query: 407 VHLAVHSLPFGGVQESGMGAYH--GKFSFDVFSHKKAVLSR 445
V + PF G + S G H GK S D ++ KK V +R
Sbjct: 439 VPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 166/406 (40%), Gaps = 30/406 (7%)
Query: 40 WRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL---KTSIKSALKELKHW 96
WR + S ++L+ DI +AL++ D+ ++ LL K ++ + ++
Sbjct: 42 WRHEEPASRAEILH----DIANALKEHEDELAKXXTLEXGKLLSESKEEVELCVSICNYY 97
Query: 97 MT--PEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLK 147
PE K T + + +A + + GV+ PWN+P F GN ++LK
Sbjct: 98 ADHGPEXLKPTKLNSDLGNAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLK 157
Query: 148 PSEVAPASSSLLAKLVGEYM--DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIV 205
+ P S++L AK++ + S I + + D + + TG+ R V
Sbjct: 158 HAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAV 217
Query: 206 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 265
AA K+L ELGG + + +V R ++ N+GQ C S II K
Sbjct: 218 AEAAGKNLKKSTXELGGNDAFIVLDDADPQV-LRNVLNDARTYNDGQVCTSSKRIIVEKS 276
Query: 266 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF-----ARLSKLLDDDKVSGKIVHG 320
+PLE+ NS A++ + +D K+ +
Sbjct: 277 RYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAID---AGAKVFYQ 333
Query: 321 -GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 379
E D PT+L D+ +D+ + +E+FGP+ + V+ + + N + L +
Sbjct: 334 YPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSS 393
Query: 380 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
+ ++ ++ + G VIN + LPFGG+++SG G
Sbjct: 394 VIGSDIDRAKKVSAQIETGXTVIN--GRWITSGELPFGGIKKSGYG 437
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 20/321 (6%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLV---GEYMD 168
EP GVV I+P+NYP F + GNA+V+KPS P +++ K + G D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 169 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVLLELGGKSPVV 227
++ + G AE + D + + +TG++ V R+V K ++ELGG P +
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 286
+L +A ++ G + GQ C + ++ + Y G
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 287 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL---LDVPRDSL 343
+ D+ +++ + + ++D G V G R + PTL+ D +D +
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMV 390
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
+ E+F P+ + V ++ + ++ N L A +F + ++ V + G + IN
Sbjct: 391 LYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
Query: 404 DTAVHLAVHSLPFGGVQESGM 424
D H + PFGG ++SG+
Sbjct: 451 DMPRH-GIGYYPFGGRKKSGV 470
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 20/321 (6%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLV---GEYMD 168
EP GVV I+P+NYP F + GNA+V+KPS P +++ K + G D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 169 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVLLELGGKSPVV 227
++ + G AE + D + + +TG++ V R+V K ++ELGG P +
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 286
+L +A ++ G + GQ C + ++ + Y G
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 287 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL---LDVPRDSL 343
+ D+ +++ + + ++D G V G R + PTL+ D +D +
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMV 390
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
+ E+F P+ + V ++ + ++ N L A +F + ++ V + G + IN
Sbjct: 391 LYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
Query: 404 DTAVHLAVHSLPFGGVQESGM 424
D H + PFGG ++SG+
Sbjct: 451 DMPRH-GIGYYPFGGRKKSGV 470
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 138/321 (42%), Gaps = 20/321 (6%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLV---GEYMD 168
EP GVV I+P+NYP F + GNA+V+KPS P +++ K + G D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 169 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVLLELGGKSPVV 227
++ + G AE + D + + +TG++ V R+V K ++ELGG P +
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 286
+L +A ++ G + GQ C + ++ + Y G
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 287 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL---LDVPRDSL 343
+ D+ +++ + + ++D G V G R + PT + D +D +
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMV 390
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
+ E+F P+ + V ++ + ++ N L A +F + ++ V + G + IN
Sbjct: 391 LYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
Query: 404 DTAVHLAVHSLPFGGVQESGM 424
D H + PFGG ++SG+
Sbjct: 451 DMPRH-GIGYYPFGGRKKSGV 470
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 140/348 (40%), Gaps = 24/348 (6%)
Query: 118 EPFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
+P G+ I+P+N+P F AIA GNA +LKPSE P+ LA+L E +
Sbjct: 161 QPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLPAG 220
Query: 171 SIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
+ VV G A+L + + G++ +AR V AA + G K+ +
Sbjct: 221 ILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXIIX 280
Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-- 287
+L A +I +G + G+ C + + + P
Sbjct: 281 PDADLDQAANALIGAGYG-SAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPYTD 339
Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDVPR 340
E D +V R+ L+D G K+V G RD +N I L DV
Sbjct: 340 EKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDDVTP 398
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
D I EIFGP+L ++ E++ + ++T + + F ++ G +
Sbjct: 399 DXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGXV 458
Query: 401 VIN-DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 445
+N V LA HS FGG + S G HG S ++ K + SR
Sbjct: 459 GVNVPIPVPLAYHS--FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 172/427 (40%), Gaps = 30/427 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
DA V R F + + R+ L+ L R ++ + ++ KP ES
Sbjct: 40 DATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWES 99
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFP---SSAEIVPEPFGVVLIISPWNY 131
+ T + S + ++ + + +T + P ++A + +P GVV + P+N+
Sbjct: 100 A--------TEVTSXVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNF 151
Query: 132 P------FFVGAIAAGNALVLKPSEVAPASSSL-LAKLVGEYMDLSSIRVVEGAVAETSA 184
P V A+ AGN +V KPSE+ P + L L + + + +V+G A
Sbjct: 152 PGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVA 211
Query: 185 LLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFDSGINLKVACRRMI 242
L + D + +TG+SR ++ + +L LE GG +P+V + +L A +I
Sbjct: 212 LAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTII 271
Query: 243 MGKWGCNNGQACISPDHIITTKD------YAPXXXXXXXXXXXXFYGKNPLESKDLSRIV 296
+ + GQ C ++ + A F + + +
Sbjct: 272 QSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFXGAVISLS 330
Query: 297 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 356
+ H + + L + D L + P +LDV + EE FGPLL +
Sbjct: 331 AAEHLLKAQEHLIGKGAQPLLAXTQPIDGAAL-LTPG-ILDVSAVAERPDEEFFGPLLQV 388
Query: 357 LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 416
+ + N+ LAA L +++++ +QF+ S G+V + + A S PF
Sbjct: 389 IRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFL-VESRAGIVNWNKQLTGAASSAPF 447
Query: 417 GGVQESG 423
GG+ SG
Sbjct: 448 GGIGASG 454
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 150/351 (42%), Gaps = 18/351 (5%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 172
P G+V II+ +N+P V A+ GN + K + P +S + K+V E ++ +++
Sbjct: 155 PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNL 214
Query: 173 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 226
GA T+ D++ D + +TG++ V ++V + LLELGG + +
Sbjct: 215 PGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAI 274
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
+ +L + + G GQ C + ++ + +P
Sbjct: 275 IVFEDADLNLVVPSAVFASVG-TAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDP 333
Query: 287 LESKDLSRIVNSNHFA--RLSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSL 343
+ L +++ L+ + + G +V GG+ D+ + PT++ + D+
Sbjct: 334 WDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAP 393
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-KKLKQQFVETVSAGGLVI 402
I+ E F P+L +L E++F N + L++ +FT + ++ + S G+V
Sbjct: 394 IVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVN 453
Query: 403 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPV 453
+ A FGG + +G G G S+ + +++ + + D+P+
Sbjct: 454 VNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQY-MRRSTCTINYSKDLPL 503
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 129/329 (39%), Gaps = 18/329 (5%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MD 168
EP GV +I+PWN+P + AI GN +V KPS + L +L E
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEG 724
Query: 169 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKH-----LTPVLLELGG 222
+ + G+V + I +TG+ RI+ AA H + ++ E+GG
Sbjct: 725 VFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGG 784
Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 281
K+ ++ D +L A ++ +G GQ C + +I Y
Sbjct: 785 KNAIIIDDDADLDEAVPHVLYSAFGFQ-GQKCSACSRVIVLDAVYDKFIERLVSMAKATK 843
Query: 282 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP-TLLLDVPR 340
G + + + + + + + + K G +++ + P T++ +
Sbjct: 844 VGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKP 903
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
+ I EEIFGP+L ++ + + + NS L +F+ + + + G L
Sbjct: 904 EHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNL 963
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHG 429
IN V PFGG + SG+G G
Sbjct: 964 YINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 139/327 (42%), Gaps = 25/327 (7%)
Query: 121 GVVLIISPWNYPFFVGAIAA-----GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
G V ISP+N+ G +A GN ++ KPS+ A +S + +++ E + + I+
Sbjct: 202 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 261
Query: 175 V--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVLL-ELGGKSPV 226
V +G + + I +TG+ + + A++L P L E GGK+
Sbjct: 262 VPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFH 321
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
S ++ + + GQ C + + K P +P
Sbjct: 322 FVHSSADVDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDP 380
Query: 287 LE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRD 341
E S ++++ FAR+ K L+ + S I+ GG+ +++ + P ++
Sbjct: 381 AEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQ 440
Query: 342 SLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--S 396
IM EEIFGP+L + DK ++ +++S T L +F +K + Q+ + +
Sbjct: 441 EPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNA 500
Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESG 423
AG IND + V PFGG + SG
Sbjct: 501 AGNFYINDKSTGSVVGQQPFGGARASG 527
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 25/327 (7%)
Query: 121 GVVLIISPWNYPFFVGAIAA-----GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
G V ISP+N+ G +A GN ++ KPS+ A +S + +++ E + + I+
Sbjct: 205 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 175 V--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-----HLTPVLL-ELGGKSPV 226
V +G + + + I +TG+ + + A+ H P L E GGK+
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
+++ + + GQ C + + P +P
Sbjct: 325 FVHRSADVESVVSGTLRSAFE-YGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
Query: 287 LE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRD 341
E S ++++ FAR+ K L+ + S I+ GG+ D + + P ++
Sbjct: 384 AEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQ 443
Query: 342 SLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--S 396
IM EEIFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +
Sbjct: 444 EPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNA 503
Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESG 423
AG IND + V PFGG + SG
Sbjct: 504 AGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 25/327 (7%)
Query: 121 GVVLIISPWNYPFFVGAIAA-----GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
G V ISP+N+ G +A GN ++ KPS+ A +S + +++ E + + I+
Sbjct: 205 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 175 V--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-----HLTPVLL-ELGGKSPV 226
V +G + + + I +TG+ + + A+ H P L E GGK+
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
+++ + + GQ C + + P +P
Sbjct: 325 FVHRSADVESVVSGTLRSAFE-YGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
Query: 287 LE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRD 341
E S ++++ FAR+ K L+ + S I+ GG+ D + + P ++
Sbjct: 384 AEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQ 443
Query: 342 SLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--S 396
IM EEIFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +
Sbjct: 444 EPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNA 503
Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESG 423
AG IND + V PFGG + SG
Sbjct: 504 AGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 25/327 (7%)
Query: 121 GVVLIISPWNYPFFVGAIAA-----GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
G V ISP+N+ G +A GN ++ KPS+ A +S + +++ E + + I+
Sbjct: 205 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 175 V--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-----HLTPVLL-ELGGKSPV 226
V +G + + + I +TG+ + + A+ H P L E GGK+
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
+++ + + GQ C + + P +P
Sbjct: 325 FVHRSADVESVVSGTLRSAFE-YGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
Query: 287 LE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRD 341
E S ++++ FAR+ K L+ + S I+ GG+ D + + P ++
Sbjct: 384 AEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQ 443
Query: 342 SLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--S 396
IM EEIFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +
Sbjct: 444 EPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNA 503
Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESG 423
AG IND + V PFGG + SG
Sbjct: 504 AGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 20/324 (6%)
Query: 121 GVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIR 173
GV + ISPWN+P F+G A+ AGN++V KP+E P + L+ E + S++
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 174 VVEGAVAETSALLDQKWD--KICYTGNSRVAR-IVMAAAAKH--LTPVLLELGGKSPVVF 228
+V G A L D + +TG++ VAR I A AAK + P++ E GG + ++
Sbjct: 711 LVTGD-GRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIA 769
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
D+ + ++ + + GQ C + + +D A +P +
Sbjct: 770 DATALPEQVADDVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSD 828
Query: 289 -SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 347
+ + +++ RL + K ++ G + +AP + L +E
Sbjct: 829 VATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELTEAGQL--TE 885
Query: 348 EIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 405
E+FGP+L ++ + +E I L + + + ++ V G + +N
Sbjct: 886 EVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRN 945
Query: 406 AVHLAVHSLPFGGVQESGMGAYHG 429
+ V PFGG SG G G
Sbjct: 946 MIGAVVGVQPFGGNGLSGTGPKAG 969
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 137/337 (40%), Gaps = 17/337 (5%)
Query: 119 PFGVVLIISPWNYPFFV----GAIA--AGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 172
P G+V II+ +N+P V AIA GN + K + S + K++ + ++ + +
Sbjct: 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 173 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 226
GA T+ D++ + + +TG+++V + V + LLELGG + +
Sbjct: 217 PGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAI 276
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
+ +L + + G GQ C + + + NP
Sbjct: 277 IAFEDADLSLVVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335
Query: 287 LESKDLSRIVNSNHFAR--LSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSL 343
+ L +++ L + + K G +V+GG+ D+ + PT++ + D+
Sbjct: 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDAS 395
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-KKLKQQFVETVSAGGLVI 402
I E F P+L + E+ F N + L++ +FT + ++ + S G+V
Sbjct: 396 IAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVN 455
Query: 403 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 439
+ A FGG + +G G G ++ + +
Sbjct: 456 VNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 492
>pdb|2H5G|A Chain A, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
pdb|2H5G|B Chain B, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
Length = 463
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 114 EIVPEPFGVVLII---SPWNYPFFVG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 169
E V P GV+L+I P P AIA+GN L+LK + A S+ +L L E + +
Sbjct: 135 EQVTVPIGVLLVIFESRPDCLPQVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSI 194
Query: 170 SSIRVVEGAV-----AETSALLDQKWDKICYTGNSRVARIVMAAA 209
++ V E LD+ D I G+S++ R + AA
Sbjct: 195 HGVKEAVQLVNTREEVEDLCRLDKXIDLIIPRGSSQLVRDIQKAA 239
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Query: 49 MKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITT 108
+K N R D+ A + LD ++ LKT ++ L+++ P +++
Sbjct: 68 LKAANAR--DVARAKDKGLDAAFVDRLTLSDKALKTMVEG-LRQVATLPDPIGEMSNLKY 124
Query: 109 FPSSAEI--VPEPFGVVLIISPWNYPFFVGAIA----AGNALVLKPSEVAPASSSLLAKL 162
PS ++ + P GV+ II + A A +GNA +L+ A S++ LAKL
Sbjct: 125 RPSGIQVGQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALESNTALAKL 184
Query: 163 VGE 165
+GE
Sbjct: 185 IGE 187
>pdb|1V75|B Chain B, Crystal Structure Of Hemoglobin D From The Aldabra Giant
Tortoise (Geochelone Gigantea) At 2.0 A Resolution
pdb|1WMU|B Chain B, Crystal Structure Of Hemoglobin D From The Aldabra Giant
Tortoise, Geochelone Gigantea, At 1.65 A Resolution
pdb|2Z6N|B Chain B, Crystal Structure Of Carbonmonoxy Hemoglobin D From The
Aldabra Giant Tortoise, Geochelone Gigantea
Length = 146
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 95 HWMTPEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPFFV--GAIAAGNALV 145
HW + EK TS+ + E+ E +LI+ PW FF G +++ NA++
Sbjct: 2 HWTSEEKQYITSLWAKVNVGEVGGEALARLLIVYPWTQRFFASFGNLSSANAIL 55
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 18/96 (18%)
Query: 177 GAVAETSALL---DQKWDKICYTGN-SRVARIVMAAAAKHLTPVLLELGGKSPVV-FDSG 231
G + TS L D D+I Y G+ + ARI++ H GG + F+
Sbjct: 364 GGIGHTSGLYTNQDVNADRIRYFGDKXKTARILINIPTTH--------GGIGDLYNFNVA 415
Query: 232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 267
+L + C G WG N+ + P H+I K A
Sbjct: 416 PSLTLGC-----GSWGGNSISENVGPKHLINKKTVA 446
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,995,938
Number of Sequences: 62578
Number of extensions: 572279
Number of successful extensions: 1828
Number of sequences better than 100.0: 94
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1447
Number of HSP's gapped (non-prelim): 100
length of query: 487
length of database: 14,973,337
effective HSP length: 103
effective length of query: 384
effective length of database: 8,527,803
effective search space: 3274676352
effective search space used: 3274676352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)