Query 011397
Match_columns 487
No_of_seqs 217 out of 1363
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 07:18:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011397.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011397hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 4.5E-97 2E-101 772.6 45.6 436 4-446 31-483 (490)
2 3sza_A Aldehyde dehydrogenase, 100.0 1.2E-96 4E-101 767.7 47.7 448 11-464 12-468 (469)
3 3ros_A NAD-dependent aldehyde 100.0 3.3E-94 1.1E-98 751.3 46.8 434 4-446 13-458 (484)
4 3iwj_A Putative aminoaldehyde 100.0 5.3E-94 1.8E-98 754.5 48.6 439 4-446 32-489 (503)
5 3rh9_A Succinate-semialdehyde 100.0 6.6E-94 2.3E-98 752.2 45.8 436 4-447 36-485 (506)
6 4f3x_A Putative aldehyde dehyd 100.0 4.5E-94 1.5E-98 752.8 43.7 436 4-445 49-496 (498)
7 3lns_A Benzaldehyde dehydrogen 100.0 2.3E-93 7.8E-98 742.4 48.7 437 2-445 13-456 (457)
8 3ed6_A Betaine aldehyde dehydr 100.0 1.3E-93 4.6E-98 752.2 47.4 436 4-446 57-510 (520)
9 3ifg_A Succinate-semialdehyde 100.0 5E-94 1.7E-98 750.6 42.7 435 4-445 37-483 (484)
10 3ek1_A Aldehyde dehydrogenase; 100.0 7.1E-94 2.4E-98 751.6 41.4 435 4-446 57-502 (504)
11 3qan_A 1-pyrroline-5-carboxyla 100.0 3.5E-93 1.2E-97 752.0 46.2 437 5-446 62-516 (538)
12 1a4s_A ALDH, betaine aldehyde 100.0 5.5E-93 1.9E-97 746.2 46.9 436 4-447 45-497 (503)
13 1wnd_A Putative betaine aldehy 100.0 5.1E-93 1.8E-97 744.3 46.5 435 4-445 47-494 (495)
14 2o2p_A Formyltetrahydrofolate 100.0 2.5E-93 8.4E-98 749.7 43.4 438 4-445 61-516 (517)
15 3u4j_A NAD-dependent aldehyde 100.0 4.4E-93 1.5E-97 749.6 44.4 436 5-447 49-499 (528)
16 3i44_A Aldehyde dehydrogenase; 100.0 1.4E-92 4.7E-97 741.4 47.0 431 4-444 50-496 (497)
17 3k2w_A Betaine-aldehyde dehydr 100.0 3.1E-93 1.1E-97 747.6 42.1 436 4-446 37-488 (497)
18 3r31_A BADH, betaine aldehyde 100.0 2.4E-93 8.2E-98 749.8 40.9 440 4-453 39-495 (517)
19 1bxs_A Aldehyde dehydrogenase; 100.0 9.1E-93 3.1E-97 743.5 44.8 436 4-446 45-496 (501)
20 3prl_A NADP-dependent glyceral 100.0 1E-92 3.5E-97 743.7 43.7 436 4-446 36-483 (505)
21 4e4g_A Methylmalonate-semialde 100.0 1.2E-92 4.1E-97 745.2 43.2 437 4-446 51-505 (521)
22 1o04_A Aldehyde dehydrogenase, 100.0 6.3E-93 2.1E-97 744.5 40.7 436 4-446 44-495 (500)
23 3b4w_A Aldehyde dehydrogenase; 100.0 8.6E-93 3E-97 743.2 41.5 434 4-445 33-481 (495)
24 2imp_A Lactaldehyde dehydrogen 100.0 2.4E-92 8.2E-97 738.8 44.6 435 4-445 31-478 (479)
25 3pqa_A Lactaldehyde dehydrogen 100.0 1.7E-92 5.8E-97 738.8 43.3 429 4-446 21-464 (486)
26 3etf_A Putative succinate-semi 100.0 4.2E-92 1.5E-96 734.8 46.0 435 4-446 16-461 (462)
27 2d4e_A 5-carboxymethyl-2-hydro 100.0 3.5E-92 1.2E-96 742.1 45.0 435 4-446 51-505 (515)
28 1uzb_A 1-pyrroline-5-carboxyla 100.0 6.5E-92 2.2E-96 740.8 47.0 437 4-445 61-515 (516)
29 3jz4_A Succinate-semialdehyde 100.0 4.1E-92 1.4E-96 737.4 45.2 435 4-445 34-480 (481)
30 4h7n_A Aldehyde dehydrogenase; 100.0 9.3E-92 3.2E-96 733.5 43.9 446 4-455 15-472 (474)
31 2w8n_A Succinate-semialdehyde 100.0 5.4E-92 1.8E-96 736.5 42.0 435 4-445 35-485 (487)
32 3r64_A NAD dependent benzaldeh 100.0 2.8E-91 9.7E-96 734.6 45.2 436 4-447 37-486 (508)
33 1uxt_A Glyceraldehyde-3-phosph 100.0 9E-92 3.1E-96 736.6 41.2 435 4-446 41-492 (501)
34 2j6l_A Aldehyde dehydrogenase 100.0 2.6E-91 9E-96 733.5 44.6 436 4-445 46-498 (500)
35 2ve5_A BADH, betaine aldehyde 100.0 3.5E-91 1.2E-95 732.5 45.5 436 4-446 31-483 (490)
36 4dng_A Uncharacterized aldehyd 100.0 6.3E-91 2.2E-95 729.7 44.0 436 4-446 31-478 (485)
37 1euh_A NADP dependent non phos 100.0 4.3E-91 1.5E-95 728.7 42.2 431 4-445 27-473 (475)
38 1t90_A MMSDH, probable methylm 100.0 1.6E-90 5.6E-95 725.7 43.2 436 4-446 30-480 (486)
39 3ty7_A Putative aldehyde dehyd 100.0 8.6E-91 2.9E-95 727.4 39.5 429 4-444 32-475 (478)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 8.3E-90 2.8E-94 727.6 42.3 447 4-457 87-561 (563)
41 3ju8_A Succinylglutamic semial 100.0 1.9E-87 6.5E-92 703.1 41.9 429 4-446 29-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 2E-87 6.9E-92 745.8 43.7 438 4-446 555-1010(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 4.8E-86 1.6E-90 699.5 36.7 437 4-446 31-519 (534)
44 3haz_A Proline dehydrogenase; 100.0 8.8E-85 3E-89 723.2 44.6 429 11-446 544-987 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 4.4E-84 1.5E-88 683.6 38.8 429 4-443 49-515 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 1E-82 3.5E-87 670.4 39.8 426 4-443 16-480 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 5.5E-78 1.9E-82 626.5 24.0 403 15-460 12-449 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.5E-76 5.2E-81 617.0 28.1 410 8-445 3-448 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 2.7E-77 9.4E-82 620.5 22.2 408 3-463 15-447 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 2E-74 6.9E-79 597.4 28.4 401 1-448 9-441 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 3.4E-74 1.2E-78 592.8 25.9 387 12-447 9-423 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 2.7E-73 9.2E-78 590.7 27.7 406 11-445 1-448 (452)
53 4gic_A HDH, histidinol dehydro 97.6 0.048 1.7E-06 54.1 26.6 330 32-442 26-399 (423)
54 1kae_A HDH, histidinol dehydro 96.2 1.2 4E-05 44.4 29.3 323 39-443 30-393 (434)
55 3v4g_A Arginine repressor; vib 44.0 91 0.0031 27.0 8.1 39 137-178 113-152 (180)
56 2fiu_A Conserved hypothetical 41.3 1.2E+02 0.004 23.2 8.1 57 297-372 16-74 (99)
57 3v42_A Folliculin; tumor suppr 39.6 29 0.001 31.4 4.5 65 131-200 21-85 (226)
58 1s7i_A Hypothetical protein PA 33.8 1.2E+02 0.0041 24.3 7.0 71 300-375 31-108 (124)
59 2ioj_A Hypothetical protein AF 28.2 35 0.0012 28.0 2.8 46 170-215 53-100 (139)
60 2yvq_A Carbamoyl-phosphate syn 25.2 57 0.002 26.9 3.7 59 162-220 62-132 (143)
61 3fgh_A Transcription factor A, 24.9 85 0.0029 21.8 4.1 37 24-60 28-64 (67)
62 1b93_A Protein (methylglyoxal 24.6 78 0.0027 26.6 4.4 94 135-251 33-135 (152)
63 3lo3_A Uncharacterized conserv 22.4 2.5E+02 0.0086 21.1 7.6 58 297-373 15-74 (94)
64 2co9_A Thymus high mobility gr 22.3 1.8E+02 0.0061 22.2 5.9 42 26-67 49-90 (102)
65 1use_A VAsp, vasodilator-stimu 22.2 56 0.0019 21.3 2.2 28 41-68 13-40 (45)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.5e-97 Score=772.57 Aligned_cols=436 Identities=24% Similarity=0.342 Sum_probs=406.4
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
++|.+++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||+.+++..|+..++
T Consensus 31 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~ 110 (490)
T 2wme_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999845799999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.+++++...+.+..... ....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 111 ~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~ 186 (490)
T 2wme_A 111 DVLEYYAGLVPAIEGEQI----PLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCEEEE----EEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHhccccccCccc----cccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHH
Confidence 999999887765432211 11234467889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHH-HHhccccceeeecCCCCcEEEcCCCC
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGIN 233 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~-~a~~~~~p~~~e~gG~~p~iV~~daD 233 (487)
++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.+++ .+++++||+++|+|||||+||++|||
T Consensus 187 ~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAd 266 (490)
T 2wme_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCcc
Confidence 999999998 99999999999 567899999997 999999999999998876 55667899999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397 234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 312 (487)
Q Consensus 234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 312 (487)
++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++|+++.
T Consensus 267 l~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~ 345 (490)
T 2wme_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999998 899999999999999999999997
Q ss_pred c-CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397 313 V-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386 (487)
Q Consensus 313 ~-~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 386 (487)
. ++++++||... .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 346 ~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~ 425 (490)
T 2wme_A 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425 (490)
T ss_dssp HTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred hcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHH
Confidence 4 78999999753 25899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
+++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 426 ~a~~~~~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 426 RAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 999999999999999998543 5688999999999999999999999999999999875
No 2
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.2e-96 Score=767.67 Aligned_cols=448 Identities=43% Similarity=0.749 Sum_probs=410.9
Q ss_pred ccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHH
Q 011397 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (487)
Q Consensus 11 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 90 (487)
....+.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++...|+..+++.+++++
T Consensus 12 ~~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 12 PRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ------CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999987569999999999999
Q ss_pred HHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHh
Q 011397 91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVG 164 (487)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~ 164 (487)
+.+..|..+..........+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.++++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 99988876543322222234467889999999999999999988 899999999999999999999999999999
Q ss_pred hhcCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHH
Q 011397 165 EYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 244 (487)
Q Consensus 165 ~alP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~ 244 (487)
+++|+|++|+|+|+.+.+..|+.|++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.++++
T Consensus 172 ~alP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 172 QYLDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251 (469)
T ss_dssp HHSCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred HhCCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence 99999999999998777888888899999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCcc
Q 011397 245 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 323 (487)
Q Consensus 245 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~ 323 (487)
+| +|+||.|+++++||||++++|+|+++|++++++++ |+|.+ ++++||+++..+++++.+++ +++++++||..
T Consensus 252 ~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~ 325 (469)
T 3sza_A 252 KF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTG 325 (469)
T ss_dssp HH-GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCE
T ss_pred HH-hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCcc
Confidence 99 99999999999999999999999999999999984 87777 89999999999999999998 57899999987
Q ss_pred CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEc
Q 011397 324 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403 (487)
Q Consensus 324 ~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN 403 (487)
+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||
T Consensus 326 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN 405 (469)
T 3sza_A 326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN 405 (469)
T ss_dssp ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEe
Confidence 66799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCC--CCccCCCCchhHHH
Q 011397 404 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPPYTKGKLR 464 (487)
Q Consensus 404 ~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~--~~~~~~~~~~~~~~ 464 (487)
++..+...+.+||||+|.||+|+++|.+|+++|++.|+|+.++++.+ ..++||||++.|.+
T Consensus 406 ~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 406 DVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp CSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred CCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 98766667899999999999999999999999999999999987765 56899999987765
No 3
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=3.3e-94 Score=751.35 Aligned_cols=434 Identities=21% Similarity=0.327 Sum_probs=410.6
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 13 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 91 (484)
T 3ros_A 13 TNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCV 91 (484)
T ss_dssp TTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999999999 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.+++|....... ..+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 92 ~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 167 (484)
T 3ros_A 92 SICNYYADHGPEMLKPTKLN----SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAA 167 (484)
T ss_dssp HHHHHHHHHHHHHTSCEEEC----CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeecc----CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99999999999887554322 134578899999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChH-hHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEGAVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl 234 (487)
++++++.++ +|+|++|+|+|+.+ .++ |+.|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 168 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl 246 (484)
T 3ros_A 168 LTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADP 246 (484)
T ss_dssp HHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCH
Confidence 999999999 99999999999654 466 99997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV 313 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 313 (487)
|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++|++++.
T Consensus 247 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 325 (484)
T 3ros_A 247 QVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAID 325 (484)
T ss_dssp HHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999998 8999999999999999999999875
Q ss_pred -CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397 314 -SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 391 (487)
Q Consensus 314 -~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~ 391 (487)
++++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus 326 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 405 (484)
T 3ros_A 326 AGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKV 405 (484)
T ss_dssp TTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHH
T ss_pred cCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 6799999975 35799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++|+|+||++. ...+.+||||+|.||+|+++|++|+++|++.|+|+.+.
T Consensus 406 ~~~l~aG~V~vN~~~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 406 SAQIETGMTVINGRW--ITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHSCSSCCEETSCC--CCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHhCccceEEECCCC--CCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 999999999999954 35689999999999999999999999999999998875
No 4
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=5.3e-94 Score=754.47 Aligned_cols=439 Identities=27% Similarity=0.429 Sum_probs=410.8
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhh-----hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFA-----SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 78 (487)
+++.+++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~e 110 (503)
T 3iwj_A 32 TQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WD 110 (503)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HH
Confidence 4678899999999999999999999999 99999999999999999999999999999999999999999998 89
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCC
Q 011397 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVA 152 (487)
Q Consensus 79 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~ 152 (487)
+..+++.+++++..++++.............+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+
T Consensus 111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~t 190 (503)
T 3iwj_A 111 IDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcc
Confidence 99999999999998887754332111111123467889999999999999999998 899999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEc
Q 011397 153 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229 (487)
Q Consensus 153 ~~~~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~ 229 (487)
|+++.++++++.++ +|+|++|+|+|+ .+.++.|+.|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||+
T Consensus 191 p~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~ 270 (503)
T 3iwj_A 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVF 270 (503)
T ss_dssp CHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEc
Confidence 99999999999998 999999999994 57889999997 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 011397 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL 308 (487)
Q Consensus 230 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i 308 (487)
+|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.+++
T Consensus 271 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 349 (503)
T 3iwj_A 271 EDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFV 349 (503)
T ss_dssp SSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHc-CCeEeeCCccC---CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 011397 309 DDDKV-SGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 384 (487)
Q Consensus 309 ~~a~~-~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d 384 (487)
++++. ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 350 ~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 429 (503)
T 3iwj_A 350 SNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISND 429 (503)
T ss_dssp HHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSC
T ss_pred HHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 99875 67999999764 468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 385 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+...
T Consensus 430 ~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 430 LERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp HHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence 99999999999999999998643 5688999999999999999999999999999998874
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=6.6e-94 Score=752.24 Aligned_cols=436 Identities=22% Similarity=0.325 Sum_probs=410.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 36 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 114 (506)
T 3rh9_A 36 TGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAA 114 (506)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999999 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEee-eeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP-EPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS 156 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~ 156 (487)
+.++++++.++++...... . ..+...++++ +|+|||++|+|||||+. ++||++||+||+|||+.+|.++
T Consensus 115 ~~l~~~a~~~~~~~~~~~~-~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 190 (506)
T 3rh9_A 115 GFFDYCAKHISALDSHTIP-E---KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTM 190 (506)
T ss_dssp HHHHHHHHHGGGGCCEECS-C---CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred HHHHHHHHHHHHhcCcccc-c---CCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHH
Confidence 9999999999887543211 1 1234677888 99999999999999998 8999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397 157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 233 (487)
Q Consensus 157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD 233 (487)
.++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus 191 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dAD 270 (506)
T 3rh9_A 191 IAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDAD 270 (506)
T ss_dssp HHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCC
Confidence 9999999999 99999999999 557899999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397 234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 312 (487)
Q Consensus 234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 312 (487)
+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.+++++++
T Consensus 271 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 349 (506)
T 3rh9_A 271 LEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDAL 349 (506)
T ss_dssp HHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999998 899999999999999999999997
Q ss_pred c-CCeEeeCCcc-CC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397 313 V-SGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 389 (487)
Q Consensus 313 ~-~~~~~~gg~~-~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~ 389 (487)
. ++++++||.. +. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus 350 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~ 429 (506)
T 3rh9_A 350 DKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQ 429 (506)
T ss_dssp HTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHH
T ss_pred HCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 5 6799999975 23 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCC
Q 011397 390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 447 (487)
Q Consensus 390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 447 (487)
++++++++|+|+||+++. ..+.+||||+|.||+|+++|++|+++|++.|+|+.+..
T Consensus 430 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 430 RVAAGLRFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp HHHHHCCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred HHHHhCCcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 999999999999999765 35789999999999999999999999999999988764
No 6
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=4.5e-94 Score=752.84 Aligned_cols=436 Identities=19% Similarity=0.323 Sum_probs=408.6
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++...|+..++
T Consensus 49 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~ 128 (498)
T 4f3x_A 49 TGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAII 128 (498)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999338999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.++++...... ....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 129 ~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~ 205 (498)
T 4f3x_A 129 DCWRFFAGAVRNLHAPAAG---EYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTAL 205 (498)
T ss_dssp HHHHHHHHHTTCCEEECBE---EEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCcccc---CCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHH
Confidence 9999999887765322111 11123467889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397 158 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 235 (487)
Q Consensus 158 ~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~ 235 (487)
++++++.+++|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 206 ~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~ 285 (498)
T 4f3x_A 206 KLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLE 285 (498)
T ss_dssp HHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHH
Confidence 99999999999999999999 567899999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397 236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV- 313 (487)
Q Consensus 236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~- 313 (487)
.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||+++..+++++.++++++.+
T Consensus 286 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (498)
T 4f3x_A 286 AVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ 364 (498)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 99999999999999999999999999999999999999988 8999999999999999999999875
Q ss_pred CC-eEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397 314 SG-KIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 391 (487)
Q Consensus 314 ~~-~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~ 391 (487)
++ ++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus 365 Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 444 (498)
T 4f3x_A 365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRA 444 (498)
T ss_dssp TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 67 899999753 4789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
++++++|+|+||+++.+ .+.+||||+|.||+|+++|.+|+++|++.|+|+..
T Consensus 445 a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 445 ASRLQYGCTWINTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp HHHCCSSEEEESCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred HHhCCcceEEEcCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 99999999999997654 48999999999999999999999999999999875
No 7
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.3e-93 Score=742.37 Aligned_cols=437 Identities=33% Similarity=0.588 Sum_probs=401.9
Q ss_pred CccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397 2 GSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (487)
Q Consensus 2 ~~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (487)
+.++|++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 13 ~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~ 92 (457)
T 3lns_A 13 GHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGA 92 (457)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHH
T ss_pred CCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999998569999
Q ss_pred HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS 155 (487)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~ 155 (487)
+++.++++++.+++|..+..........+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.+
T Consensus 93 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 172 (457)
T 3lns_A 93 VLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPET 172 (457)
T ss_dssp HHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHH
T ss_pred HHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999999998876543322222234577889999999999999999998 899999999999999999999
Q ss_pred HHHHHHHHhhhcCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397 156 SSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 235 (487)
Q Consensus 156 ~~~l~~~l~~alP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~ 235 (487)
+.++++++.+++|+|++|+|+|+.+.+..|+++++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 173 ~~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~ 252 (457)
T 3lns_A 173 SAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLD 252 (457)
T ss_dssp HHHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHH
T ss_pred HHHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHH
Confidence 99999999999999999999998888999998669999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCC
Q 011397 236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG 315 (487)
Q Consensus 236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~ 315 (487)
.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++ |.+. ++||++++.+++++.++++++ ++
T Consensus 253 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a--~~ 325 (457)
T 3lns_A 253 QTVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEAT--QG 325 (457)
T ss_dssp HHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHC--CS
T ss_pred HHHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhc--CC
Confidence 99999999999 99999999999999999999999999999999988 6666 999999999999999999984 47
Q ss_pred eEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHHHHh
Q 011397 316 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVET 394 (487)
Q Consensus 316 ~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~v~t~d~~~~~~~~~~ 394 (487)
++++||..+++|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+.+++++++
T Consensus 326 ~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~ 405 (457)
T 3lns_A 326 QVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQ 405 (457)
T ss_dssp EEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHT
T ss_pred eEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHh
Confidence 99999986667999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 395 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 395 ~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
+++|+|+||+++.+...+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 406 l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 406 IQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp SCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred CCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 999999999987655678999999999999999999999999999999764
No 8
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.3e-93 Score=752.23 Aligned_cols=436 Identities=22% Similarity=0.367 Sum_probs=410.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHh--hhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (487)
+++.+++++.++.+|+++|+++|++|| +.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~ 135 (520)
T 3ed6_A 57 NQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDD 135 (520)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHH
Confidence 467889999999999999999999999 899999999999999999999999999999999999999999999 79999
Q ss_pred HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS 155 (487)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~ 155 (487)
+++.+++++..++.+..... . ....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|++
T Consensus 136 ~~~~~~~~a~~~~~~~g~~~-~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t 212 (520)
T 3ed6_A 136 IHNVFMYFAGLADKDGGEMI-D--SPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLT 212 (520)
T ss_dssp HHHHHHHHHHHTTSCCEEEE-C--CSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcCeec-c--cCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHH
Confidence 99999999988776543211 1 11123467889999999999999999998 899999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397 156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 232 (487)
Q Consensus 156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da 232 (487)
+.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus 213 ~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dA 292 (520)
T 3ed6_A 213 TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA 292 (520)
T ss_dssp HHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCC
Confidence 99999999999 99999999999 568899999997 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397 233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD 311 (487)
Q Consensus 233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a 311 (487)
|+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.++++++
T Consensus 293 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a 371 (520)
T 3ed6_A 293 DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVA 371 (520)
T ss_dssp CHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999998 89999999999999999999998
Q ss_pred Hc-CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCH
Q 011397 312 KV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 385 (487)
Q Consensus 312 ~~-~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 385 (487)
+. ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 372 ~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 451 (520)
T 3ed6_A 372 KAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDI 451 (520)
T ss_dssp HHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCH
T ss_pred HhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 75 67999999764 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++++++++|+|+||+++.+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 452 ~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 452 GKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp HHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred HHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 99999999999999999997653 588999999999999999999999999999998875
No 9
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5e-94 Score=750.62 Aligned_cols=435 Identities=24% Similarity=0.363 Sum_probs=406.4
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 115 (484)
T 3ifg_A 37 TGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAA 115 (484)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.+++++....+...... .....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 116 ~~l~~~a~~~~~~~g~~~---~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 192 (484)
T 3ifg_A 116 SFIEWFAEEGKRVAGDTL---PTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL 192 (484)
T ss_dssp HHHHHHHHHHTTCCEEEE---CCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHhhcCccc---cccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999999887665322111 111123467889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl 234 (487)
.+++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl 272 (484)
T 3ifg_A 193 AMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADL 272 (484)
T ss_dssp HHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCH
Confidence 999999998 99999999999 457899999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV 313 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 313 (487)
|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||+++..+++++.++++++..
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 351 (484)
T 3ifg_A 273 DAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALA 351 (484)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999998 8999999999999999999999875
Q ss_pred -CCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397 314 -SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 391 (487)
Q Consensus 314 -~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~ 391 (487)
++++++||...+ +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 352 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 431 (484)
T 3ifg_A 352 KGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRV 431 (484)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHH
T ss_pred CCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 679999997643 699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
++++++|+|+||++. ...+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 432 ~~~l~aG~v~iN~~~--~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 432 AEALEYGMVGINTGL--ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCCCSEEEESCSC--CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCcceEEEcCCC--CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999854 3568999999999999999999999999999998753
No 10
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=7.1e-94 Score=751.64 Aligned_cols=435 Identities=23% Similarity=0.378 Sum_probs=406.9
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 135 (504)
T 3ek1_A 57 DGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAA 135 (504)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999998 7999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.+++++.....+..... .....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 136 ~~~~~~a~~~~~~~g~~~---~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~ 212 (504)
T 3ek1_A 136 SFIEWFAEEAKRVYGDTI---PAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212 (504)
T ss_dssp HHHHHHHHHHTTCCEEEE---CCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCccc---ccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 999999887655422111 111122467889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl 234 (487)
++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 213 ~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl 292 (504)
T 3ek1_A 213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADL 292 (504)
T ss_dssp HHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCH
Confidence 999999998 99999999998 457899999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV 313 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 313 (487)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||+++..+++++.++++++..
T Consensus 293 ~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 371 (504)
T 3ek1_A 293 DAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVS 371 (504)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999998 8999999999999999999999875
Q ss_pred -CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397 314 -SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 392 (487)
Q Consensus 314 -~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~ 392 (487)
++++++||.. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 372 ~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 450 (504)
T 3ek1_A 372 KGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVS 450 (504)
T ss_dssp TTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred CCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 6799999975 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
+++++|+|+||++. ...+.+||||+|.||+|+++|.+|+++|++.|+|+...
T Consensus 451 ~~l~aG~V~vN~~~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 451 EALEYGMVGHNTGL--ISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHSCCSEEEESCSC--CCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HhCCcCeEEECCCC--CCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 99999999999865 35688999999999999999999999999999998764
No 11
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=3.5e-93 Score=751.99 Aligned_cols=437 Identities=22% Similarity=0.351 Sum_probs=410.5
Q ss_pred chhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHH
Q 011397 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (487)
Q Consensus 5 ~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 84 (487)
++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+++
T Consensus 62 ~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 140 (538)
T 3qan_A 62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAID 140 (538)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999 79999999
Q ss_pred HHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHH
Q 011397 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSL 158 (487)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~ 158 (487)
.++++++.+..+..++.... ..+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.+
T Consensus 141 ~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 141 FLEYYARQMIELNRGKEILS---RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHTCBCCCC---CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeecc---cCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 99999998666655443221 123467889999999999999999988 899999999999999999999999
Q ss_pred HHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc------ccceeeecCCCCcEEEc
Q 011397 159 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVVFD 229 (487)
Q Consensus 159 l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~------~~p~~~e~gG~~p~iV~ 229 (487)
+++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.++++ +||+++|+|||||+||+
T Consensus 218 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~ 297 (538)
T 3qan_A 218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVD 297 (538)
T ss_dssp HHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEEC
T ss_pred HHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEEC
Confidence 99999998 99999999999 567899999997 99999999999999999999988 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 011397 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL 308 (487)
Q Consensus 230 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i 308 (487)
+|||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+.+++.+++
T Consensus 298 ~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i 376 (538)
T 3qan_A 298 RDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYI 376 (538)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHcCCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397 309 DDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387 (487)
Q Consensus 309 ~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 387 (487)
+++...|++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 377 ~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 456 (538)
T 3qan_A 377 EIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAH 456 (538)
T ss_dssp HHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHH
T ss_pred HHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHH
Confidence 99876449999998654 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeC
Q 011397 388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++|++.|+|..+.
T Consensus 457 a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 457 IEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp HHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 99999999999999995433444789999999999999 999999999999999998875
No 12
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=5.5e-93 Score=746.15 Aligned_cols=436 Identities=25% Similarity=0.375 Sum_probs=409.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 45 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 123 (503)
T 1a4s_A 45 TGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAW 123 (503)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999997 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.++++.. +.... ..+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 124 ~~~~~~a~~~~~~~g-~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 199 (503)
T 1a4s_A 124 QCIEYYAGLAPTLSG-QHIQL---PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199 (503)
T ss_dssp HHHHHHHHHGGGCCE-EEEEC---GGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcC-CcccC---CCCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999998887653 21111 122356889999999999999999988 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 235 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~ 235 (487)
++++++.++ +|+|++|+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 200 ~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~ 279 (503)
T 1a4s_A 200 ILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHH
Confidence 999999998 99999999999437889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397 236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV- 313 (487)
Q Consensus 236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~- 313 (487)
.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++..
T Consensus 280 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 358 (503)
T 1a4s_A 280 NAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 99999999999999999999999999999999999999999 8999999999999999999999864
Q ss_pred CCeEeeCCccC-------CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397 314 SGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386 (487)
Q Consensus 314 ~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 386 (487)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (503)
T 1a4s_A 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 77999999764 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCC
Q 011397 387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 447 (487)
Q Consensus 387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 447 (487)
.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+..
T Consensus 439 ~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~ 497 (503)
T 1a4s_A 439 RAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG 497 (503)
T ss_dssp HHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCS
T ss_pred HHHHHHHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEccC
Confidence 999999999999999999764 46789999999999999999999999999999988653
No 13
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=5.1e-93 Score=744.29 Aligned_cols=435 Identities=23% Similarity=0.354 Sum_probs=407.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHH-HHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIY-EVALL 82 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~-ev~~~ 82 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. . |+..+
T Consensus 47 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~~Ev~~~ 125 (495)
T 1wnd_A 47 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAF-NDEIPAI 125 (495)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HTHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467789999999999999999999999999999999999999999999999999999999999999999998 6 99999
Q ss_pred HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS 156 (487)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~ 156 (487)
++.++++++.++++.... ... ...+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++
T Consensus 126 ~~~~~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 202 (495)
T 1wnd_A 126 VDVFRFFAGAARCLNGLA-AGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 202 (495)
T ss_dssp HHHHHHHHHHTTCCEEEC-BEE--EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcCcc-ccC--CCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHH
Confidence 999999998887764321 111 1112256789999999999999999987 8999999999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397 157 SLLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234 (487)
Q Consensus 157 ~~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl 234 (487)
.++++++.+++|+|++|+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 203 ~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl 282 (495)
T 1wnd_A 203 LKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADI 282 (495)
T ss_dssp HHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCH
Confidence 999999999999999999999 667899999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV 313 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 313 (487)
+.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++.+
T Consensus 283 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 361 (495)
T 1wnd_A 283 EAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKA 361 (495)
T ss_dssp HHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999 99999999999999999999999999999999999999999 8999999999999999999999875
Q ss_pred -C-CeEeeCCc-cCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397 314 -S-GKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 390 (487)
Q Consensus 314 -~-~~~~~gg~-~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~ 390 (487)
+ +++++||. .++.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++
T Consensus 362 ~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 441 (495)
T 1wnd_A 362 TGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR 441 (495)
T ss_dssp TSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHH
T ss_pred CCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 5 79999997 54468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
+++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+..
T Consensus 442 ~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 442 VSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 99999999999998653 458899999999999999999999999999998763
No 14
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=2.5e-93 Score=749.75 Aligned_cols=438 Identities=21% Similarity=0.317 Sum_probs=407.2
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (487)
+++.+++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..
T Consensus 61 tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 140 (517)
T 2o2p_A 61 DGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGM 140 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4678899999999999999999999999 99999999999999999999999999999999999999999986579999
Q ss_pred HHHHHHHHHHHHhhhhcCCccccccccCCC-cceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397 82 LKTSIKSALKELKHWMTPEKAKTSITTFPS-SAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA 154 (487)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~ 154 (487)
+++.++++++.++++.... ........+. ..+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+
T Consensus 141 ~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ 219 (517)
T 2o2p_A 141 SIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219 (517)
T ss_dssp HHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHH
Confidence 9999999999887765322 1110000122 46789999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcC
Q 011397 155 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 230 (487)
Q Consensus 155 ~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~ 230 (487)
++.++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus 220 ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~ 299 (517)
T 2o2p_A 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECC
Confidence 999999999998 99999999999 557899999997 999999999999999999999 89999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD 309 (487)
Q Consensus 231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~ 309 (487)
|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++
T Consensus 300 dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~ 378 (517)
T 2o2p_A 300 DCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQ 378 (517)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999999999999999999999999999988 899999999999999999999
Q ss_pred HHHc-CCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCH
Q 011397 310 DDKV-SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNK 385 (487)
Q Consensus 310 ~a~~-~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~ 385 (487)
++.+ ++++++||.... .|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++|+++|||+++|||+|.
T Consensus 379 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 458 (517)
T 2o2p_A 379 RGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDI 458 (517)
T ss_dssp HHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBH
T ss_pred HHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCH
Confidence 9875 679999997643 689999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+..
T Consensus 459 ~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 459 NKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 9999999999999999998643 467899999999999999999999999999999764
No 15
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.4e-93 Score=749.62 Aligned_cols=436 Identities=26% Similarity=0.368 Sum_probs=410.6
Q ss_pred chhhccccCCCHHHHHHHHHHHHHHh--hhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397 5 EETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (487)
Q Consensus 5 ~~~~~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (487)
+|.+++++.++.+|+++++++|++|| +.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus 49 g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~ 127 (528)
T 3u4j_A 49 GEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFC 127 (528)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 67899999999999999999999999 889999999999999999999999999999999999999999996 999999
Q ss_pred HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS 156 (487)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~ 156 (487)
++.++++++.++++... .... ...+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++
T Consensus 128 ~~~l~~~a~~~~~~~~~-~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (528)
T 3u4j_A 128 ADLWSYAAGQARALEGQ-THNN--IGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS 204 (528)
T ss_dssp HHHHHHHHHHHTTCCEE-EECC--SCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcCe-eecc--CCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH
Confidence 99999999988876522 1111 1123467889999999999999999998 8999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397 157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 233 (487)
Q Consensus 157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD 233 (487)
.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dAD 284 (528)
T 3u4j_A 205 IRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADAD 284 (528)
T ss_dssp HHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSC
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCC
Confidence 9999999999 99999999999 678899999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397 234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 312 (487)
Q Consensus 234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 312 (487)
+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.+++++++
T Consensus 285 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 363 (528)
T 3u4j_A 285 LDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGI 363 (528)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999998 899999999999999999999987
Q ss_pred c-CCeEeeCCccCC--CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397 313 V-SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 389 (487)
Q Consensus 313 ~-~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~ 389 (487)
. ++++++||.... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 364 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 443 (528)
T 3u4j_A 364 TSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETAL 443 (528)
T ss_dssp HTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred HCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Confidence 5 679999997644 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCC
Q 011397 390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 447 (487)
Q Consensus 390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 447 (487)
++++++++|+|+||+++. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+..
T Consensus 444 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 444 QTIRRIRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp HHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred HHHHhCCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 999999999999999754 46899999999999999999999999999999988753
No 16
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.4e-92 Score=741.43 Aligned_cols=431 Identities=23% Similarity=0.371 Sum_probs=403.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++..|+..++
T Consensus 50 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 129 (497)
T 3i44_A 50 TEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGS 129 (497)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999756999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEe-eeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIV-PEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS 156 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~ 156 (487)
+.++++++.+..+...... ..+...+++ ++|+|||++|+|||||+. ++||++||+||+|||+.+|+++
T Consensus 130 ~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (497)
T 3i44_A 130 SHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA 204 (497)
T ss_dssp HHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHH
T ss_pred HHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHH
Confidence 9999999888765432111 012346777 999999999999999988 8999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397 157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 233 (487)
Q Consensus 157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD 233 (487)
.++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD 284 (497)
T 3i44_A 205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD 284 (497)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh
Confidence 9999999999 99999999999 567899999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397 234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 312 (487)
Q Consensus 234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 312 (487)
+.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.++|++++
T Consensus 285 -~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 362 (497)
T 3i44_A 285 -IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI 362 (497)
T ss_dssp -TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999998 899999999999999999999986
Q ss_pred c-CCeEeeCCc-cCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397 313 V-SGKIVHGGE-RDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387 (487)
Q Consensus 313 ~-~~~~~~gg~-~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 387 (487)
. ++++++||. ... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 363 ~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 442 (497)
T 3i44_A 363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSK 442 (497)
T ss_dssp HTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence 5 679999994 322 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397 388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 444 (487)
Q Consensus 388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~ 444 (487)
++++++++++|+|+||. ....+.+||||+|.||+|+++|.+++++|++.|+|+.
T Consensus 443 a~~~a~~l~aG~V~iN~---~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~ 496 (497)
T 3i44_A 443 CRRIAAQVRSGMVEVNG---HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496 (497)
T ss_dssp HHHHHHHSCCSEEEETT---CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEESC
T ss_pred HHHHHHhCCcCeEEECC---CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEEe
Confidence 99999999999999995 2346889999999999999999999999999999853
No 17
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=3.1e-93 Score=747.64 Aligned_cols=436 Identities=22% Similarity=0.335 Sum_probs=408.4
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 115 (497)
T 3k2w_A 37 TGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTA 115 (497)
T ss_dssp SCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.++++...... ....+...++.++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 116 ~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (497)
T 3k2w_A 116 TFIDYGCDNALTIEGDILP---SDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192 (497)
T ss_dssp HHHHHHHHTTTTCCEEEEE---CSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHhcCcccc---cCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999999888776533211 11223467889999999999999999988 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl 234 (487)
++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl 272 (497)
T 3k2w_A 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADL 272 (497)
T ss_dssp HHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCH
Confidence 999999998 99999999999 567899999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV 313 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 313 (487)
+.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.+++++++.
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 351 (497)
T 3k2w_A 273 DKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIK 351 (497)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999998 8999999999999999999999864
Q ss_pred -CCeEeeCCcc--C-C--CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397 314 -SGKIVHGGER--D-K--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387 (487)
Q Consensus 314 -~~~~~~gg~~--~-~--~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 387 (487)
++++++||.. . . +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 352 ~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 431 (497)
T 3k2w_A 352 QGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFAN 431 (497)
T ss_dssp HHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHH
T ss_pred CCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Confidence 7899999973 2 2 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++++++|+|+||+++.+ .+.+||||+|.||+|+++|.+|+++|++.|+|..+.
T Consensus 432 a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 432 INQAISDLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HHHHHHHCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 999999999999999998754 488999999999999999999999999999998775
No 18
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.4e-93 Score=749.83 Aligned_cols=440 Identities=26% Similarity=0.344 Sum_probs=406.8
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++ |+..++
T Consensus 39 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~ 115 (517)
T 3r31_A 39 TGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPT 115 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999886 999999
Q ss_pred HHHHHHHHHHhh---hhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397 84 TSIKSALKELKH---WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA 154 (487)
Q Consensus 84 ~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~ 154 (487)
+.++++++..+. +..+..... ..+. .+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.
T Consensus 116 ~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 191 (517)
T 3r31_A 116 SGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191 (517)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCS
T ss_pred HHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHH
Confidence 999999988776 333332211 1223 7889999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397 155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 232 (487)
Q Consensus 155 ~~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da 232 (487)
++.++++++.++ +|+|+||+|+|+.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus 192 t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dA 271 (517)
T 3r31_A 192 GALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDA 271 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCC
Confidence 999999999999 99999999999778899999997 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397 233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD 311 (487)
Q Consensus 233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a 311 (487)
|+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++|+++
T Consensus 272 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a 350 (517)
T 3r31_A 272 DIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKG 350 (517)
T ss_dssp CHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999998 89999999999999999999999
Q ss_pred Hc-CCeEeeCCccC----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397 312 KV-SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386 (487)
Q Consensus 312 ~~-~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 386 (487)
++ ++++++||... .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 351 ~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 430 (517)
T 3r31_A 351 KAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430 (517)
T ss_dssp HHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHH
Confidence 74 78999999312 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCCCCc
Q 011397 387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPV 453 (487)
Q Consensus 387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~~ 453 (487)
.++++++++++|+|+||+++. ..+.+||||+|.||+|+++|++|+++|++.|+|+.+..+.+.++
T Consensus 431 ~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~ 495 (517)
T 3r31_A 431 RAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPY 495 (517)
T ss_dssp HHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC------
T ss_pred HHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCCCCCCCc
Confidence 999999999999999999653 56899999999999999999999999999999998875544443
No 19
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=9.1e-93 Score=743.46 Aligned_cols=436 Identities=24% Similarity=0.344 Sum_probs=408.5
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhh---hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~ 80 (487)
+++.+++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus 45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~ 124 (501)
T 1bxs_A 45 TEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLG 124 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 4678899999999999999999999999 8999999999999999999999999999999999999999987657999
Q ss_pred HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA 154 (487)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~ 154 (487)
.+++.++++++.++++...... . ..+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+
T Consensus 125 ~~~~~~~~~a~~~~~~~g~~~~-~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 200 (501)
T 1bxs_A 125 GCIKTLRYCAGWADKIQGRTIP-M---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 200 (501)
T ss_dssp HHHHHHHHHHHHGGGCCEEEEC-C---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHHhhCCeee-c---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHH
Confidence 9999999999998887543211 1 122356889999999999999999987 89999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcC
Q 011397 155 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 230 (487)
Q Consensus 155 ~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~ 230 (487)
++..+++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus 201 t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~ 280 (501)
T 1bxs_A 201 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA 280 (501)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECC
Confidence 999999999998 99999999999 667899999997 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD 309 (487)
Q Consensus 231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~ 309 (487)
|||+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++
T Consensus 281 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 359 (501)
T 1bxs_A 281 DADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIE 359 (501)
T ss_dssp TSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999999999999999999999999999998 899999999999999999999
Q ss_pred HHHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397 310 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387 (487)
Q Consensus 310 ~a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 387 (487)
++.+ ++++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 360 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 439 (501)
T 1bxs_A 360 SGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 439 (501)
T ss_dssp HHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHH
Confidence 9864 67999999764 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|..+.
T Consensus 440 a~~~~~~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~ 496 (501)
T 1bxs_A 440 AITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496 (501)
T ss_dssp HHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEcc
Confidence 99999999999999999653 4578999999999999999999999999999998763
No 20
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1e-92 Score=743.74 Aligned_cols=436 Identities=24% Similarity=0.360 Sum_probs=406.3
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 36 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 114 (505)
T 3prl_A 36 SGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTA 114 (505)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999999 7999999
Q ss_pred HHHHHHHHHHhhhhcCCcccccccc--CCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITT--FPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS 155 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~ 155 (487)
+.++++++.+.++............ .+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.+
T Consensus 115 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t 194 (505)
T 3prl_A 115 DIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLS 194 (505)
T ss_dssp HHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred HHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 9999999998876532211100000 02356789999999999999999998 899999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397 156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 232 (487)
Q Consensus 156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da 232 (487)
+.+|++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.++ +||+++|+|||||+||++||
T Consensus 195 a~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 272 (505)
T 3prl_A 195 GIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDA 272 (505)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTC
T ss_pred HHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCC
Confidence 99999999998 99999999999 567899999997 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 011397 233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK 312 (487)
Q Consensus 233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~ 312 (487)
|++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+++++||+++..+++++.+++++++
T Consensus 273 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~ 351 (505)
T 3prl_A 273 DLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDAL 351 (505)
T ss_dssp CHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999998899999999999999999999997
Q ss_pred c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397 313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 391 (487)
Q Consensus 313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~ 391 (487)
. ++++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus 352 ~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 429 (505)
T 3prl_A 352 ENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINI 429 (505)
T ss_dssp HTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHH
T ss_pred HCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHH
Confidence 5 6799999974 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 430 ~~~l~aG~V~iN~~~~-~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 430 GKHLEVGTVHINAKTE-RGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp HHTSCSSEEEESSCCC-SCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHCCeeEEEEcCCCC-CCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 9999999999999764 34688999999999999999999999999999998875
No 21
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-92 Score=745.22 Aligned_cols=437 Identities=20% Similarity=0.280 Sum_probs=407.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 129 (521)
T 4e4g_A 51 TGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGL 129 (521)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.+++++..... ..+.... ....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 130 ~~l~~~a~~~~~-~~~~~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~ 206 (521)
T 4e4g_A 130 EVCEFVIGIPHL-QKSEFTE--GAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPI 206 (521)
T ss_dssp HHHHHHHTHHHH-TCEEEEE--EEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHH
T ss_pred HHHHHHHHHHHH-hcCcccc--cCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 999999875443 3322111 11123357889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 235 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~ 235 (487)
++++++.++ +|+|+||+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~ 286 (521)
T 4e4g_A 207 RLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLD 286 (521)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHH
Confidence 999999998 99999999999888889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccccCCEEEEcCC-cHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397 236 VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV 313 (487)
Q Consensus 236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 313 (487)
.|++.+++++| .|+||.|+++++||||++ ++|+|+++|+++++++++|+|.+ ++++||+++..+++++.+++++++.
T Consensus 287 ~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (521)
T 4e4g_A 287 QAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIE 365 (521)
T ss_dssp HHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999999999999 99999999999999999999988 8999999999999999999999864
Q ss_pred -CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397 314 -SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387 (487)
Q Consensus 314 -~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 387 (487)
++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 366 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 445 (521)
T 4e4g_A 366 QGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDA 445 (521)
T ss_dssp HTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHH
T ss_pred CCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHH
Confidence 77999999642 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEeC
Q 011397 388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g--~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++++++|+|+||+++. ...+.+||||+|.||+| +++|.+|+++|++.|+|+.++
T Consensus 446 a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 446 ARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp HHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred HHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 99999999999999999753 34588999999999999 789999999999999998864
No 22
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=6.3e-93 Score=744.51 Aligned_cols=436 Identities=24% Similarity=0.354 Sum_probs=408.3
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhh---hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~ 80 (487)
+++.+++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus 44 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~ 123 (500)
T 1o04_A 44 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLD 123 (500)
T ss_dssp TTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4678899999999999999999999999 8999999999999999999999999999999999999999987657999
Q ss_pred HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA 154 (487)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~ 154 (487)
.+++.++++++.++++...... . ..+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+
T Consensus 124 ~~~~~~~~~a~~~~~~~g~~~~-~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 199 (500)
T 1o04_A 124 MVLKCLRYYAGWADKYHGKTIP-I---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199 (500)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEC-C---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHHHhhCccee-c---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChH
Confidence 9999999999988877543211 1 122356789999999999999999987 89999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcC
Q 011397 155 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 230 (487)
Q Consensus 155 ~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~ 230 (487)
++.++++++.++ +|+|++|+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus 200 t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~ 279 (500)
T 1o04_A 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS 279 (500)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECC
Confidence 999999999998 99999999999 667899999997 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD 309 (487)
Q Consensus 231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~ 309 (487)
|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++
T Consensus 280 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 358 (500)
T 1o04_A 280 DADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYIN 358 (500)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999999999999999999999999999998 899999999999999999999
Q ss_pred HHHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397 310 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387 (487)
Q Consensus 310 ~a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 387 (487)
++.+ ++++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 359 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 438 (500)
T 1o04_A 359 TGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 438 (500)
T ss_dssp HHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 9864 67999999764 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|..+.
T Consensus 439 a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 439 ANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp HHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred HHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 99999999999999999653 4578999999999999999999999999999998763
No 23
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.6e-93 Score=743.25 Aligned_cols=434 Identities=26% Similarity=0.372 Sum_probs=407.3
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (487)
+++.+++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 33 tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 112 (495)
T 3b4w_A 33 TGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMG 112 (495)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4678899999999999999999999999 99999999999999999999999999999999999999999986579999
Q ss_pred HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS 155 (487)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~ 155 (487)
+++.++++++.++++.... .. ...+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|++
T Consensus 113 ~~~~~~~~a~~~~~~~g~~-~~---~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 188 (495)
T 3b4w_A 113 SMGAMNYFAGAADKVTWTE-TR---TGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLT 188 (495)
T ss_dssp HHHHHHHHHTCGGGSCSEE-EE---EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHH
T ss_pred HHHHHHHHHHHHHHhcCCc-cc---CCCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHH
Confidence 9999999998887765422 11 1112256889999999999999999998 899999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397 156 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 233 (487)
Q Consensus 156 ~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD 233 (487)
+.++++++.++ +|+|++|+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 189 ~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dAD 268 (495)
T 3b4w_A 189 ANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVD 268 (495)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCC
T ss_pred HHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCC
Confidence 99999999998 99999999999777899999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397 234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 312 (487)
Q Consensus 234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 312 (487)
++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++++.
T Consensus 269 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~ 347 (495)
T 3b4w_A 269 LAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGI 347 (495)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999988 899999999999999999999987
Q ss_pred c-CCeEeeCCccCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397 313 V-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 388 (487)
Q Consensus 313 ~-~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 388 (487)
+ ++++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 348 ~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 427 (495)
T 3b4w_A 348 EEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKG 427 (495)
T ss_dssp HTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHH
T ss_pred hCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHH
Confidence 5 679999997643 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
+++++++++|+|+||++. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 428 ~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 428 IKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp HHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred HHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 999999999999999864 458899999999999999999999999999999875
No 24
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2.4e-92 Score=738.83 Aligned_cols=435 Identities=24% Similarity=0.360 Sum_probs=406.7
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+.+.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 109 (479)
T 2imp_A 31 TEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTA 109 (479)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.++++...... ....+...++.++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 110 ~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 186 (479)
T 2imp_A 110 DYIDYMAEWARRYEGEIIQ---SDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186 (479)
T ss_dssp HHHHHHHTTTTTCCCEEEC---CSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhCCccc---cCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 9999998877766543211 11112356889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl 234 (487)
++++++.++ +|+|++|+|+|+ .+.++.|++|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 266 (479)
T 2imp_A 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADL 266 (479)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCH
Confidence 999999998 999999999994 46789999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC--CCcccccCCHHHHHHHHHHHHHHH
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE--SKDLSRIVNSNHFARLSKLLDDDK 312 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~--~~~~gpl~~~~~~~~~~~~i~~a~ 312 (487)
+.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++.
T Consensus 267 ~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~ 345 (479)
T 2imp_A 267 ELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAV 345 (479)
T ss_dssp HHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999986 899999999999999999999986
Q ss_pred c-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397 313 V-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 390 (487)
Q Consensus 313 ~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~ 390 (487)
+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++
T Consensus 346 ~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~ 425 (479)
T 2imp_A 346 EEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMK 425 (479)
T ss_dssp HTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHH
T ss_pred HCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 5 67999999752 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
+++++++|+|+||+++.+ .+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 426 ~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 426 AIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999997654 58899999999999999999999999999999764
No 25
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.7e-92 Score=738.77 Aligned_cols=429 Identities=28% Similarity=0.432 Sum_probs=403.6
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++
T Consensus 21 tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 99 (486)
T 3pqa_A 21 SLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSI 99 (486)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.+.++...... ..+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 100 ~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 174 (486)
T 3pqa_A 100 GTFKLAAFYVKEHRDEVIP-----SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174 (486)
T ss_dssp HHHHHHHHHHHHCCEEEEC-----CTTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCceec-----CCCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHH
Confidence 9999999998887533211 113467889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-----cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcC
Q 011397 158 LLAKLVGEY-----MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230 (487)
Q Consensus 158 ~l~~~l~~a-----lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~ 230 (487)
++++++.++ +|+|++|+|+|+ .+.++.|++|+ ||.|+||||+.+|+.|++.++ +||+++|+|||||+||++
T Consensus 175 ~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~ 252 (486)
T 3pqa_A 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLK 252 (486)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcC
Confidence 999999988 999999999994 45689999997 999999999999999998877 899999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD 309 (487)
Q Consensus 231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~ 309 (487)
|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++
T Consensus 253 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~ 331 (486)
T 3pqa_A 253 DADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVE 331 (486)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999999999999999999999999999988 899999999999999999999
Q ss_pred HHHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397 310 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 388 (487)
Q Consensus 310 ~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 388 (487)
++.. ++++++||.. +|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.+.+
T Consensus 332 ~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a 407 (486)
T 3pqa_A 332 KAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKS 407 (486)
T ss_dssp HHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHH
T ss_pred HHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHH
Confidence 9875 6799999965 5899999999 9999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
+++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 408 ~~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 408 LKFAENLEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp HHHHHHSCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHhCCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999998653 3458999999999999999999999999999998875
No 26
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=4.2e-92 Score=734.80 Aligned_cols=435 Identities=22% Similarity=0.361 Sum_probs=410.7
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
++|.+++++..+.+++++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 94 (462)
T 3etf_A 16 TGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSA 94 (462)
T ss_dssp TCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++....+..... ....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~ 170 (462)
T 3etf_A 95 ALCDWYAEHGPAMLNPEP----TLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQ 170 (462)
T ss_dssp HHHHHHHHHHHHHTSCEE----CSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHhHHHhcCCcc----cCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence 999999998887764431 11123467889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 235 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~ 235 (487)
++++++.++ +|+|++|+|+|+.+.+..|++|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 171 ~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~ 250 (462)
T 3etf_A 171 MIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_dssp HHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHH
Confidence 999999998 99999999999888899999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397 236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV- 313 (487)
Q Consensus 236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~- 313 (487)
.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++++..
T Consensus 251 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 329 (462)
T 3etf_A 251 LAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAE 329 (462)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 99999999999999999999999999999999999999988 8999999999999999999999875
Q ss_pred CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397 314 SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 392 (487)
Q Consensus 314 ~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~ 392 (487)
++++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++
T Consensus 330 ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~ 409 (462)
T 3etf_A 330 GARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMA 409 (462)
T ss_dssp TCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHH
T ss_pred CCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 6799999974 357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
+++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.++
T Consensus 410 ~~l~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 410 ARLECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HHCCSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred HhCCcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 999999999999753 5688999999999999999999999999999998764
No 27
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.5e-92 Score=742.06 Aligned_cols=435 Identities=23% Similarity=0.336 Sum_probs=407.1
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 129 (515)
T 2d4e_A 51 TNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAA 129 (515)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.++++.... ... ...+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 130 ~~l~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 206 (515)
T 2d4e_A 130 ENFAFYAEYAEHAMEDR-TFP--VDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206 (515)
T ss_dssp HHHHHHHTTGGGTTCEE-ECC--BTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccc--CCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHH
Confidence 99999988877765321 111 0122356789999999999999999987 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl 234 (487)
++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl 286 (515)
T 2d4e_A 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADL 286 (515)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCH
Confidence 999999998 99999999999 457899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV 313 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 313 (487)
+.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++|+++.+
T Consensus 287 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (515)
T 2d4e_A 287 ERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKR 365 (515)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999999 7999999999999999999999864
Q ss_pred -CCeEeeCCccCC---------CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecC
Q 011397 314 -SGKIVHGGERDK---------NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 383 (487)
Q Consensus 314 -~~~~~~gg~~~~---------~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~ 383 (487)
++++++||.... .|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 366 ~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 444 (515)
T 2d4e_A 366 EGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTR 444 (515)
T ss_dssp TTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred CCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECC
Confidence 679999997643 589999999999 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 384 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 384 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 445 d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 445 DLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp BHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 999999999999999999998653 5688999999999999999999999999999998864
No 28
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.5e-92 Score=740.80 Aligned_cols=437 Identities=22% Similarity=0.337 Sum_probs=408.6
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 61 t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 139 (516)
T 1uzb_A 61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI 139 (516)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.++++....... ....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 217 (516)
T 1uzb_A 140 DFIEYYARAALRYRYPAVEV--VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHGGGCSSCCCC--CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc--cCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence 99999999988876533210 11112356789999999999999999987 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh------ccccceeeecCCCCcEEE
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 228 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~------~~~~p~~~e~gG~~p~iV 228 (487)
.+++++.++ +|+|++|+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.++ +++||+++|+|||||+||
T Consensus 218 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV 297 (516)
T 1uzb_A 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeE
Confidence 999999998 99999999999 667899999997 999999999999999999998 789999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 011397 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKL 307 (487)
Q Consensus 229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~ 307 (487)
++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++||| + ++++||++++.+++++.++
T Consensus 298 ~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~ 375 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSY 375 (516)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHH
Confidence 999999999999999999 999999999999999999999999999999999999999 7 8999999999999999999
Q ss_pred HHHHHcCCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397 308 LDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386 (487)
Q Consensus 308 i~~a~~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 386 (487)
++++.+.+++++||.. +..|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 376 i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~ 455 (516)
T 1uzb_A 376 IEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKRE 455 (516)
T ss_dssp HHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHH
T ss_pred HHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 9998766688899976 246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEe
Q 011397 387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~-~~g~~~l~~~~~~k~v~~~ 445 (487)
.++++++++++|+|+||+++.+...+.+||||+|.||+|+ ++|.+++++|++.|+|..+
T Consensus 456 ~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 456 HLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 9999999999999999997666567889999999999995 7899999999999998763
No 29
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=4.1e-92 Score=737.42 Aligned_cols=435 Identities=23% Similarity=0.373 Sum_probs=406.5
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 34 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 112 (481)
T 3jz4_A 34 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAA 112 (481)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.+++++....+.... ... ....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 113 ~~~~~~a~~~~~~~~~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 189 (481)
T 3jz4_A 113 SFIEWFAEEGKRIYGD-TIP--GHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189 (481)
T ss_dssp HHHHHHHHHGGGCCEE-EEC--CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCc-ccc--ccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 9999998776543211 111 11123367789999999999999999988 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl 234 (487)
++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 190 ~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 269 (481)
T 3jz4_A 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL 269 (481)
T ss_dssp HHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCH
Confidence 999999998 99999999999 667899999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV 313 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 313 (487)
+.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++..
T Consensus 270 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 348 (481)
T 3jz4_A 270 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALE 348 (481)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999998 8999999999999999999999875
Q ss_pred -CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397 314 -SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 391 (487)
Q Consensus 314 -~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~ 391 (487)
++++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 349 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 428 (481)
T 3jz4_A 349 KGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV 428 (481)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHH
T ss_pred CCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 6799999976 34679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 429 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 429 GEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhCCeeeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999999754 468899999999999999999999999999999864
No 30
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=9.3e-92 Score=733.46 Aligned_cols=446 Identities=23% Similarity=0.326 Sum_probs=411.9
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+.|.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+++|+++++.|+||+. ++. .|+...+
T Consensus 15 tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~~ 92 (474)
T 4h7n_A 15 TGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS-ITV-LEIDSFL 92 (474)
T ss_dssp TCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-HHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-HHH-HHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999985 444 7999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.+++++....++......... .........++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 170 (474)
T 4h7n_A 93 ASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVA 170 (474)
T ss_dssp HHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHH
T ss_pred HHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHH
Confidence 9999998888877654432211 112255677899999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 236 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~ 236 (487)
.+.+++.++ +|+|++++++|+.+.+..|+.| +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.
T Consensus 171 ~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~ 249 (474)
T 4h7n_A 171 PLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLEL 249 (474)
T ss_dssp HHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHH
T ss_pred HHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHH
Confidence 999999998 9999999999998999999877 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-C
Q 011397 237 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-S 314 (487)
Q Consensus 237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~ 314 (487)
|++.+++++| +|+||.|++++|||||++++|+|+++|++++.++++|+|.+ ++++||++++.+.+++.++++++.+ +
T Consensus 250 aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g 328 (474)
T 4h7n_A 250 ATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKG 328 (474)
T ss_dssp HHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhC
Confidence 9999999999 99999999999999999999999999999999999999998 8999999999999999999999875 6
Q ss_pred CeEeeCCccC--CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397 315 GKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 392 (487)
Q Consensus 315 ~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~ 392 (487)
++++.||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 329 a~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 408 (474)
T 4h7n_A 329 AVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVA 408 (474)
T ss_dssp CEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHH
T ss_pred ceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 7888888754 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeCCCCCCCccC
Q 011397 393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRY 455 (487)
Q Consensus 393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~ 455 (487)
+++++|+|+||+++.+...+.+||||+|.||+| +++|.+|+++|++.|+|+++....+.++||
T Consensus 409 ~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 409 RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 999999999999887777789999999999998 789999999999999999886544555544
No 31
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=5.4e-92 Score=736.46 Aligned_cols=435 Identities=24% Similarity=0.383 Sum_probs=407.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 35 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 113 (487)
T 2w8n_A 35 SGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSA 113 (487)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999999999999999998 7999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.++++.. +.... ...+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 114 ~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 190 (487)
T 2w8n_A 114 FFLEWFSEEARRVYG-DIIHT--PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL 190 (487)
T ss_dssp HHHHHHHHHGGGCCC-EEECC--SCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcC-ccccc--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 999999988766432 21111 1123466889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEe---C-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397 158 LLAKLVGEY-MDLSSIRVVE---G-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 231 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~---g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d 231 (487)
.+++++.++ +|+|++|+|+ | +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus 191 ~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~d 270 (487)
T 2w8n_A 191 ALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDS 270 (487)
T ss_dssp HHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTT
T ss_pred HHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCC
Confidence 999999998 9999999999 8 567889999997 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhh-hcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397 232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPLE-SKDLSRIVNSNHFARLSKLLD 309 (487)
Q Consensus 232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~ 309 (487)
||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++ +++|||.+ ++++||++++.+++++.++++
T Consensus 271 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~ 349 (487)
T 2w8n_A 271 ANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349 (487)
T ss_dssp SCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999 99999998 899999999999999999999
Q ss_pred HHHc-CCeEeeCCccCCCCc-eeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397 310 DDKV-SGKIVHGGERDKNKL-RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387 (487)
Q Consensus 310 ~a~~-~~~~~~gg~~~~~g~-~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 387 (487)
++.+ ++++++||..+..|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 350 ~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 429 (487)
T 2w8n_A 350 DAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ 429 (487)
T ss_dssp HHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHH
T ss_pred HHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHH
Confidence 9875 679999997655688 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 430 a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 430 IWRVAEQLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHHSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 999999999999999997653 46799999999999999999999999999999764
No 32
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.8e-91 Score=734.61 Aligned_cols=436 Identities=22% Similarity=0.358 Sum_probs=389.9
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~ 115 (508)
T 3r64_A 37 DDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAG 115 (508)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999998 7999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH-
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS- 156 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~- 156 (487)
+.++++++..+.... ..... ...+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++
T Consensus 116 ~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (508)
T 3r64_A 116 NITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192 (508)
T ss_dssp HHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHT
T ss_pred HHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 999998766554322 11100 0112467889999999999999999998 8999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc--cccceeeecCCCCcEEEcCC
Q 011397 157 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSG 231 (487)
Q Consensus 157 ~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~--~~~p~~~e~gG~~p~iV~~d 231 (487)
.++++++.++ +|+|++|+|+|+ .+.++.|++|+ +|.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|
T Consensus 193 ~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~d 272 (508)
T 3r64_A 193 VIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLAD 272 (508)
T ss_dssp HHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTT
T ss_pred HHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCC
Confidence 9999999998 999999999994 78899999997 9999999999999999999998 89999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397 232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 310 (487)
Q Consensus 232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~ 310 (487)
||+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.+++++
T Consensus 273 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 351 (508)
T 3r64_A 273 ADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIEL 351 (508)
T ss_dssp SCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred HHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397 311 DKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 389 (487)
Q Consensus 311 a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~ 389 (487)
++. ++++++||.. +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus 352 a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 429 (508)
T 3r64_A 352 AKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA 429 (508)
T ss_dssp HHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHH
T ss_pred HHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHH
Confidence 975 6799999975 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCC
Q 011397 390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 447 (487)
Q Consensus 390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 447 (487)
++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++..
T Consensus 430 ~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 430 QFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp HHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred HHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 9999999999999998754 46889999999999999999999999999999988753
No 33
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=9e-92 Score=736.60 Aligned_cols=435 Identities=20% Similarity=0.316 Sum_probs=404.8
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhh-hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (487)
+++.+++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus 41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~ 119 (501)
T 1uxt_A 41 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA 119 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 5678899999999999999999999999 99999999999999999999999999999999999999999998 899999
Q ss_pred HHHHHHHHHHHhhhhcCCccccccccC--CCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397 83 KTSIKSALKELKHWMTPEKAKTSITTF--PSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA 154 (487)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~ 154 (487)
++.++++++.++++.. +......... ....+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.
T Consensus 120 ~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~ 198 (501)
T 1uxt_A 120 VDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 198 (501)
T ss_dssp HHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchH
Confidence 9999999888777632 2111100011 1256889999999999999999988 89999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397 155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 232 (487)
Q Consensus 155 ~~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da 232 (487)
++.++++++.++ +|+|++|+|+|+.+.++.|++|+ +|.|+||||+.+|+.|++.++ +||+++|+|||||+||++||
T Consensus 199 t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 276 (501)
T 1uxt_A 199 PAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDA 276 (501)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCC
Confidence 999999999998 99999999999657889999996 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397 233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD 311 (487)
Q Consensus 233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a 311 (487)
|++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++
T Consensus 277 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a 355 (501)
T 1uxt_A 277 DLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDA 355 (501)
T ss_dssp CHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999998 89999999999999999999998
Q ss_pred Hc-CCeEeeCCccCCCC-ceeecEEEecCC---CCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397 312 KV-SGKIVHGGERDKNK-LRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386 (487)
Q Consensus 312 ~~-~~~~~~gg~~~~~g-~~~~Ptv~~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 386 (487)
.. ++++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 356 ~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 433 (501)
T 1uxt_A 356 VEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 433 (501)
T ss_dssp HHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHH
T ss_pred HHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHH
Confidence 75 6699999975 57 999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
.++++++++++|+|+||+++ +...+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 434 ~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 434 KIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp HHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred HHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 99999999999999999974 345689999999999999999999999999999998874
No 34
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=2.6e-91 Score=733.50 Aligned_cols=436 Identities=17% Similarity=0.224 Sum_probs=402.7
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..++
T Consensus 46 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 124 (500)
T 2j6l_A 46 NNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYV 124 (500)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999996 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.++++... ... ....+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 125 ~~~~~~a~~~~~~~g~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 201 (500)
T 2j6l_A 125 DICDYAVGLSRMIGGP-ILP--SERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV 201 (500)
T ss_dssp HHHHHHHHHTTTCCCB-EEC--CSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCc-ccc--ccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHH
Confidence 9999998877655321 111 00112245678999999999999999986 89999999999999999999999
Q ss_pred HHHHHHhh----h-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397 158 LLAKLVGE----Y-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 231 (487)
Q Consensus 158 ~l~~~l~~----a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d 231 (487)
++++++.+ + +|+|++|+|+|+.+.++.|++|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus 202 ~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~d 281 (500)
T 2j6l_A 202 AVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFED 281 (500)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCC
Confidence 99998775 3 99999999999777899999996 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397 232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 310 (487)
Q Consensus 232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~ 310 (487)
||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.+++++
T Consensus 282 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 360 (500)
T 2j6l_A 282 ADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEE 360 (500)
T ss_dssp CCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred HHc-CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397 311 DKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 388 (487)
Q Consensus 311 a~~-~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 388 (487)
+++ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 440 (500)
T 2j6l_A 361 AKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRI 440 (500)
T ss_dssp HHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHH
T ss_pred HHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 875 6799999975 34689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 389 QQFV--ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 389 ~~~~--~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
++++ .++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++|++.|+|...
T Consensus 441 ~~~~~~~~~~~G~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 441 FRWLGPKGSDCGIVNVNIPTS-GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp HHHHSTTSCCSSEEEESSCTT-CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred HHHHhhccCCeeEEEECCCCc-cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 9999 779999999998653 3457899999999999999999999999999999764
No 35
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.5e-91 Score=732.51 Aligned_cols=436 Identities=25% Similarity=0.348 Sum_probs=408.6
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++..|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 110 (490)
T 2ve5_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999833999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.+..+.. .... ...+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 111 ~~~~~~a~~~~~~~~-~~~~---~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~ 186 (490)
T 2ve5_A 111 DVLEYYAGLVPAIEG-EQIP---LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCE-EEEE---EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcC-cccc---CCCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 999999988776532 2111 1223467889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHH-hccccceeeecCCCCcEEEcCCCC
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAA-AKHLTPVLLELGGKSPVVFDSGIN 233 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a-~~~~~p~~~e~gG~~p~iV~~daD 233 (487)
+|++++.++ +|+|+||+|+| +.+.++.|+.|+ ||.|+||||+.+|+.|++.+ ++++||+++|+|||||+||++|||
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dAD 266 (490)
T 2ve5_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECCCCC
Confidence 999999998 99999999999 678899999997 99999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397 234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 312 (487)
Q Consensus 234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 312 (487)
++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++++.
T Consensus 267 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~ 345 (490)
T 2ve5_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999988 899999999999999999999987
Q ss_pred c-CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397 313 V-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386 (487)
Q Consensus 313 ~-~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 386 (487)
. ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 346 ~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 425 (490)
T 2ve5_A 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425 (490)
T ss_dssp HTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred HCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 5 67999999762 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+.+.
T Consensus 426 ~a~~~~~~l~aG~v~vN~~~~--~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 426 RAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHhCCcceEEECCCCC--CCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 999999999999999999654 4688999999999999999999999999999998865
No 36
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6.3e-91 Score=729.71 Aligned_cols=436 Identities=20% Similarity=0.313 Sum_probs=384.3
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 31 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 109 (485)
T 4dng_A 31 DQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTI 109 (485)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999999 6999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH-
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS- 156 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~- 156 (487)
+.++++++.++... +...... ...+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++
T Consensus 110 ~~~~~~a~~~~~~~-~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 187 (485)
T 4dng_A 110 AILDEAMTYTGELG-GVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187 (485)
T ss_dssp HHHHHHHHHGGGCS-CEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHT
T ss_pred HHHHHHHHHHHHhC-Ceecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 99999988876432 2211110 0122467889999999999999999988 8999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397 157 SLLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 233 (487)
Q Consensus 157 ~~l~~~l~~a-lP~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD 233 (487)
.++.+++.++ +|+|+||+|+|+. +.++.|++|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 188 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dAD 267 (485)
T 4dng_A 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDAD 267 (485)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCC
Confidence 9999999998 9999999999965 5889999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397 234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 312 (487)
Q Consensus 234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 312 (487)
++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||+++..+.+++.+++++++
T Consensus 268 l~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~ 346 (485)
T 4dng_A 268 VDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAK 346 (485)
T ss_dssp HHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999998 899999999999999999999987
Q ss_pred c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397 313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 391 (487)
Q Consensus 313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~ 391 (487)
. ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++++||+++|||+|.+.++++
T Consensus 347 ~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~ 424 (485)
T 4dng_A 347 TDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF 424 (485)
T ss_dssp HTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHH
T ss_pred HCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 5 6799999975 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+.+.
T Consensus 425 ~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 425 ALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred HHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999997644 5688999999999999999999999999999998765
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=4.3e-91 Score=728.65 Aligned_cols=431 Identities=23% Similarity=0.363 Sum_probs=403.5
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++. .|+..++
T Consensus 27 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 105 (475)
T 1euh_A 27 SGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTA 105 (475)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCC----Ccc-eEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCC
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFP----SSA-EIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVA 152 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~ 152 (487)
+.++++++.++++..... ... ..+ ... +++++|+|||++|+|||||+. ++||++||+||+|||+.+
T Consensus 106 ~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~t 182 (475)
T 1euh_A 106 EIINYAAEEGLRMEGEVL-EGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182 (475)
T ss_dssp HHHHHHHHHHTTCCEEEE-EGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTT
T ss_pred HHHHHHHHHHHHhcCCcc-cCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcC
Confidence 999999998877653321 111 112 345 889999999999999999988 899999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEc
Q 011397 153 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229 (487)
Q Consensus 153 ~~~~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~ 229 (487)
|.++.++++++.++ +|+|++|+|+|+ .+.++.|++|+ +|.|+||||+.+|+.|++.++ +||+++|+|||||+||+
T Consensus 183 p~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~ 260 (475)
T 1euh_A 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVL 260 (475)
T ss_dssp HHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEEC
Confidence 99999999999998 999999999995 56789999997 999999999999999999887 89999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 011397 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD 309 (487)
Q Consensus 230 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~ 309 (487)
+|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+++++||+++..+++++.++++
T Consensus 261 ~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~ 339 (475)
T 1euh_A 261 EDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLIN 339 (475)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397 310 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 388 (487)
Q Consensus 310 ~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 388 (487)
++.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 340 ~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~ 417 (475)
T 1euh_A 340 DANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417 (475)
T ss_dssp HHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHH
T ss_pred HHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHH
Confidence 9864 6789999875 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceeeEEEcC-CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 389 QQFVETVSAGGLVIND-TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 389 ~~~~~~~~~g~v~iN~-~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
+++++++++|+|+||+ +..+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 418 ~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 418 FGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 9999999999999998 5542 58899999999999999999999999999999865
No 38
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.6e-90 Score=725.66 Aligned_cols=436 Identities=22% Similarity=0.313 Sum_probs=404.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 30 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 108 (486)
T 1t90_A 30 TKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGI 108 (486)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.+++++.... +..++.... ...+...+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 109 ~~~~~~a~~~~-~~~g~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 185 (486)
T 1t90_A 109 ENVEFAAGAPS-LMMGDSLAS--IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTE 185 (486)
T ss_dssp HHHHHHTTHHH-HHCEEEEEE--EETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHH-HhcCccccc--CCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99999875433 333322111 1122356789999999999999999987 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 235 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~ 235 (487)
++++++.++ +|+|++|+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 186 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~ 265 (486)
T 1t90_A 186 KLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLE 265 (486)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHH
Confidence 999999998 99999999999878899999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccccCCE-EEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397 236 VACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV 313 (487)
Q Consensus 236 ~aa~~i~~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 313 (487)
.|++.+++++| .|+||.|+++++ ||||++ +|+|+++|+++++++++|+|.+ ++++||+++..+++++.++++++.+
T Consensus 266 ~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~ 343 (486)
T 1t90_A 266 DTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLE 343 (486)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999 999999999999 999999 9999999999999999999988 8999999999999999999999864
Q ss_pred -CCeEeeCCccC--CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397 314 -SGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 390 (487)
Q Consensus 314 -~~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~ 390 (487)
++++++||... .+|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++
T Consensus 344 ~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~ 423 (486)
T 1t90_A 344 EGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRY 423 (486)
T ss_dssp HTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHH
T ss_pred CCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence 77999998742 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEeC
Q 011397 391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g--~~~g~~~l~~~~~~k~v~~~~ 446 (487)
+++++++|+|+||++. +...+.+||||+|.||+| +++|.+|+++|++.|+|+.++
T Consensus 424 ~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 424 FRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp HHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred HHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999854 334578999999999999 899999999999999998764
No 39
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=8.6e-91 Score=727.45 Aligned_cols=429 Identities=25% Similarity=0.417 Sum_probs=382.4
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
+++.+++++..+.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..++
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 111 (478)
T 3ty7_A 32 TEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGL 111 (478)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999448999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++.+.++.... .....+++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 112 ~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (478)
T 3ty7_A 112 NHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV 183 (478)
T ss_dssp HHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence 99999999888765322 12367889999999999999999998 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl 234 (487)
++++++.++ +|+|++|+|+| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus 184 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 263 (478)
T 3ty7_A 184 ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDI 263 (478)
T ss_dssp HHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCH
Confidence 999999999 99999999999 567899999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH-
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK- 312 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~- 312 (487)
+.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++++.
T Consensus 264 ~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 342 (478)
T 3ty7_A 264 KEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIE 342 (478)
T ss_dssp HHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999998 899999999999999999999986
Q ss_pred cCCeEeeCCccC----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397 313 VSGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 388 (487)
Q Consensus 313 ~~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 388 (487)
+++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+
T Consensus 343 ~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a 422 (478)
T 3ty7_A 343 EGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETL 422 (478)
T ss_dssp HTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 478999998432 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397 389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 444 (487)
Q Consensus 389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~ 444 (487)
+++++++++|+|+||+ . ...+.+||||+|.||+|+++|.+|+++|++.|+|+.
T Consensus 423 ~~~~~~l~~G~v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 423 HKVARSIEAGTVEINE-A--GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHHHSCSSEEEETT-C--C----------------------CCGGGEEEEEEET
T ss_pred HHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 9999999999999999 3 245789999999999999999999999999999873
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=8.3e-90 Score=727.63 Aligned_cols=447 Identities=19% Similarity=0.247 Sum_probs=408.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHhhcCCCcchhhHHH-HHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNER-EPDIVDALRQDLDKPELESSIYE-VAL 81 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~-~~~la~~~~~e~Gk~~~~a~~~e-v~~ 81 (487)
+++.+++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++ +++|+.++++|+|||..++. .| +..
T Consensus 87 ~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~-~e~v~~ 165 (563)
T 4e3x_A 87 HAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAE-IDAAAE 165 (563)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHH-HHTTHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHh-HHHHHH
Confidence 4688999999999999999999999999999999999999999999999999 99999999999999999998 55 999
Q ss_pred HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS 155 (487)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~ 155 (487)
+++.++++++.+.++........ ........++.|+|||++|+|||||+. ++|| +||+||+|||+.+|++
T Consensus 166 ~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~s 241 (563)
T 4e3x_A 166 LIDFFRFNAKFAVELEGEQPISV---PPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLA 241 (563)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCC---TTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHhhCCCccCC---CCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHH
Confidence 99999999999888765332211 111234566778899999999999996 7888 5999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccc------eeeecCCCCcE
Q 011397 156 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPV 226 (487)
Q Consensus 156 ~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p------~~~e~gG~~p~ 226 (487)
+.++++++.++ +|+|+||+|+|+ .+.++.|++|+ ||.|+||||+.+|+.|++.+++++|| +++|+|||||+
T Consensus 242 a~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~ 321 (563)
T 4e3x_A 242 SYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFH 321 (563)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEE
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCce
Confidence 99999999998 999999999995 46789999997 99999999999999999999999885 99999999999
Q ss_pred EEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCC-CC-CCcccccCCHHHHHHH
Q 011397 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LE-SKDLSRIVNSNHFARL 304 (487)
Q Consensus 227 iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~-~~~~gpl~~~~~~~~~ 304 (487)
||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++||| .+ ++++||++++.+++++
T Consensus 322 IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv 400 (563)
T 4e3x_A 322 FVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARI 400 (563)
T ss_dssp EECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHH
T ss_pred eeCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHH
Confidence 99999999999999999999 999999999999999999999999999999999999999 88 8999999999999999
Q ss_pred HHHHHHHHc--CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCC--HHHHHHHH-hcCCCCceE
Q 011397 305 SKLLDDDKV--SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAA 378 (487)
Q Consensus 305 ~~~i~~a~~--~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~ 378 (487)
.++|+++++ ++++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++ |+++|||++
T Consensus 401 ~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta 480 (563)
T 4e3x_A 401 KKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTG 480 (563)
T ss_dssp HHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEE
T ss_pred HHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEE
Confidence 999999973 67999999764 4689999999999999999999999999999999997 79999999 789999999
Q ss_pred EEecCCHHHHHHHHHhcc--eeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeCCCCCCCccC
Q 011397 379 YLFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRY 455 (487)
Q Consensus 379 ~v~t~d~~~~~~~~~~~~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~ 455 (487)
+|||+|.+.+++++++++ +|+|+||+.+++...+.+||||+|.||+| +.+|++++++|++.|+|... |.++..++|
T Consensus 481 ~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~y 559 (563)
T 4e3x_A 481 AVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRY 559 (563)
T ss_dssp EEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSC
T ss_pred EEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccC
Confidence 999999999999999975 99999999876666788999999999998 89999999999999999876 444444556
Q ss_pred CC
Q 011397 456 PP 457 (487)
Q Consensus 456 ~~ 457 (487)
|.
T Consensus 560 p~ 561 (563)
T 4e3x_A 560 SY 561 (563)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.9e-87 Score=703.14 Aligned_cols=429 Identities=21% Similarity=0.296 Sum_probs=398.8
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
++|.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 29 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 107 (490)
T 3ju8_A 29 GQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMV 107 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.++++++....+....... ..+....++++|+|||++|+|||||+. ++||++||+||+|||+.+|.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (490)
T 3ju8_A 108 NKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183 (490)
T ss_dssp HHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHH
Confidence 99999998887765432211 122355677999999999999999987 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccce-eeecCCCCcEEEcCCCCH
Q 011397 158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKSPVVFDSGINL 234 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~-~~e~gG~~p~iV~~daDl 234 (487)
++++++.++ +|+|++|+|+|+.+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+ ++|+|||||+||++|||+
T Consensus 184 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl 263 (490)
T 3ju8_A 184 LTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADL 263 (490)
T ss_dssp HHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCH
Confidence 999999998 99999999999888999999997 999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccccCCEEEEcCCc-HHHHHHHHHHHHhhhcCCC-CCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKN-PLE-SKDLSRIVNSNHFARLSKLLDDD 311 (487)
Q Consensus 235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-p~~-~~~~gpl~~~~~~~~~~~~i~~a 311 (487)
|.|++.+++++| +|+||.|++++++|||+++ +|+|+++|+++++++++|+ |.+ .+++||+++..+.+++.++++++
T Consensus 264 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a 342 (490)
T 3ju8_A 264 DAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHL 342 (490)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999996 9999999999999999999 888 89999999999999999999998
Q ss_pred Hc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397 312 KV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 389 (487)
Q Consensus 312 ~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~ 389 (487)
.. ++++++||... .+|+|++|||+. ++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++
T Consensus 343 ~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~ 421 (490)
T 3ju8_A 343 IGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFE 421 (490)
T ss_dssp HHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHH
T ss_pred HHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHH
Confidence 64 77999998653 478999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397 390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 446 (487)
++++++++|+|+||+++. ...+.+||||+|.||.+ ++++|++.|+|+...
T Consensus 422 ~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 422 QFLVESRAGIVNWNKQLT-GAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHHHCCSSEEEESSCSS-CCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHHHhcCcceEEECCCcC-CCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999999999999999764 34578999999999974 589999999987663
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=2e-87 Score=745.82 Aligned_cols=438 Identities=18% Similarity=0.269 Sum_probs=411.0
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (487)
.++.+++++.++.+++++|+++|++||+.|+.+|.++|.++|++++++|++++++|+.+++.|+|||..++. .|+..++
T Consensus 555 ~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai 633 (1026)
T 4f9i_A 555 PSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAI 633 (1026)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHH
Confidence 477899999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS 157 (487)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~ 157 (487)
+.+++++..+..+........ ..+....+.++|+|||++|+|||||+. ++||++||+||+|||+.+|+++.
T Consensus 634 d~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~ 710 (1026)
T 4f9i_A 634 DFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGW 710 (1026)
T ss_dssp HHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHH
Confidence 999999999888754332211 123467789999999999999999988 89999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh------ccccceeeecCCCCcEEE
Q 011397 158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 228 (487)
Q Consensus 158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~------~~~~p~~~e~gG~~p~iV 228 (487)
.+++++.++ +|+|+||+|+| +.+.+..|++|+ ||.|+||||+++|+.|++.++ +++||+++|+|||||+||
T Consensus 711 ~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV 790 (1026)
T 4f9i_A 711 HLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIII 790 (1026)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEE
Confidence 999999998 99999999999 456899999997 999999999999999999988 478999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 011397 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKL 307 (487)
Q Consensus 229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~ 307 (487)
++|||++.|++.+++|+| .|+||.|++++++|||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++
T Consensus 791 ~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~ 869 (1026)
T 4f9i_A 791 DDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEY 869 (1026)
T ss_dssp CTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHH
Confidence 999999999999999999 99999999999999999999999999999999999999999 8999999999999999999
Q ss_pred HHHHHcCCeEeeCCccCCC-CceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397 308 LDDDKVSGKIVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386 (487)
Q Consensus 308 i~~a~~~~~~~~gg~~~~~-g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 386 (487)
|++++..+++++||..++. |+|+.|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 870 i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~ 949 (1026)
T 4f9i_A 870 AEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPE 949 (1026)
T ss_dssp HHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHH
T ss_pred HHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHH
Confidence 9999876699999976554 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEeC
Q 011397 387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~-~~g~~~l~~~~~~k~v~~~~ 446 (487)
.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|....
T Consensus 950 ~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 950 HLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999999999999999998776667889999999999995 68999999999999998865
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=4.8e-86 Score=699.46 Aligned_cols=437 Identities=16% Similarity=0.231 Sum_probs=391.1
Q ss_pred cchhhccccCCCHHHHHHHHHHHHHH-hhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (487)
Q Consensus 4 ~~~~~~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (487)
+++.+++++..+ +|+++++++|++| |+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus 31 tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~ 108 (534)
T 2y53_A 31 TGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGG 108 (534)
T ss_dssp TCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 467889999988 8999999999999 5999999999999999999999999999999999999999999998 799999
Q ss_pred HHHHHHHHHHHhhhhcCCc---cc-cccccCCC-cceEeeeec-eEEEEEcCCCcchh------hhhhhcCCeEEEeCCC
Q 011397 83 KTSIKSALKELKHWMTPEK---AK-TSITTFPS-SAEIVPEPF-GVVLIISPWNYPFF------VGAIAAGNALVLKPSE 150 (487)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~---~~-~~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~ 150 (487)
++.+++++..++.+..... .. ........ .....++|+ |||++|+|||||+. ++||++||+||+|||+
T Consensus 109 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~ 188 (534)
T 2y53_A 109 IFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPAT 188 (534)
T ss_dssp HHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999887765432110 00 00001111 357789997 99999999999997 8999999999999999
Q ss_pred CChHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC--CCCeEEEecCHHHHHHHHHHHh--ccccceeeecCCCC
Q 011397 151 VAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA--KHLTPVLLELGGKS 224 (487)
Q Consensus 151 ~~~~~~~~l~~~l~~a--lP~g~v~~v~g~~~~~~~L~~~--~v~~v~ftGs~~~g~~v~~~a~--~~~~p~~~e~gG~~ 224 (487)
.+|+++..+++++.++ +|+|+||+|+|+.+ .+.++ .+|.|+||||+.+|+.|++.++ +++||+++|+||||
T Consensus 189 ~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~ 265 (534)
T 2y53_A 189 ATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265 (534)
T ss_dssp GGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCE
T ss_pred cchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCC
Confidence 9999999999999986 69999999998532 24443 3899999999999999998765 88999999999999
Q ss_pred cEEEcCCC-----CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCH
Q 011397 225 PVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNS 298 (487)
Q Consensus 225 p~iV~~da-----Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~ 298 (487)
|+||++|| |+|.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++
T Consensus 266 p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~ 344 (534)
T 2y53_A 266 SAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344 (534)
T ss_dssp EEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred eEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCH
Confidence 99999999 99999999999999 99999999999999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHcCCeEeeCCccC-------CCCceeecEEEecCCCC--CcccccccccceeeeeeeC---CH----
Q 011397 299 NHFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVD---KI---- 362 (487)
Q Consensus 299 ~~~~~~~~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~--~~~~~~E~fgPvl~v~~~~---~~---- 362 (487)
.+++++.++|+++.+++++++||... ..|+|++|||+.+++++ |++++||+||||++|++|+ |+
T Consensus 345 ~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~ 424 (534)
T 2y53_A 345 EQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424 (534)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CT
T ss_pred HHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCC
Confidence 99999999999986678999998642 35899999999999987 6899999999999999999 99
Q ss_pred -HHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc--ceeeEEEcCCccc-------cCCCCCCcccCCCCCCCCc-chHH
Q 011397 363 -EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAY-HGKF 431 (487)
Q Consensus 363 -~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~--~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~g~~-~g~~ 431 (487)
||||+++|+++|||+++|||+|.+.++++++++ ++|+|+||++... ...+.+||||+|.||+|++ +|.+
T Consensus 425 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~ 504 (534)
T 2y53_A 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLR 504 (534)
T ss_dssp THHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGG
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHH
Confidence 999999999999999999999999999999999 8999999986421 2357899999999999999 6999
Q ss_pred HHHHhhhccEEEEeC
Q 011397 432 SFDVFSHKKAVLSRG 446 (487)
Q Consensus 432 ~l~~~~~~k~v~~~~ 446 (487)
++++|++.|+|...+
T Consensus 505 ~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 505 ALAFYHRRSAIQAAS 519 (534)
T ss_dssp GGGGGEEEEEEEEEH
T ss_pred HHHHHhhhheeecCH
Confidence 999999999988764
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=8.8e-85 Score=723.15 Aligned_cols=429 Identities=21% Similarity=0.306 Sum_probs=399.1
Q ss_pred ccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHH
Q 011397 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (487)
Q Consensus 11 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 90 (487)
++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..+++.+++++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred HHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHh
Q 011397 91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVG 164 (487)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~ 164 (487)
...+.+....... ....+...++.++|+|||++|+|||||+. ++||++||+||+|||+.+|.++..+++++.
T Consensus 623 ~~a~~~~g~~~~~--~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 623 AQGRKLFGSETAM--PGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHSSCEEC--CCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHhhcCccccc--cCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 9888765432111 11223467889999999999999999988 899999999999999999999999999999
Q ss_pred hh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc---ccceeeecCCCCcEEEcCCCCHHHHHH
Q 011397 165 EY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGINLKVACR 239 (487)
Q Consensus 165 ~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~---~~p~~~e~gG~~p~iV~~daDl~~aa~ 239 (487)
++ +|+|+||+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|++
T Consensus 701 eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~ 780 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVAD 780 (1001)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHH
T ss_pred HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHH
Confidence 98 99999999999655599999997 99999999999999999988864 899999999999999999999999999
Q ss_pred HHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHcCCeEe
Q 011397 240 RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIV 318 (487)
Q Consensus 240 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~ 318 (487)
.+++|+| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||+++..+.+++.++|+++..++++
T Consensus 781 ~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v- 858 (1001)
T 3haz_A 781 DVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL- 858 (1001)
T ss_dssp HHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-
T ss_pred HHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-
Confidence 9999999 99999999999999999999999999999999999999998 89999999999999999999998876688
Q ss_pred eCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcc
Q 011397 319 HGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 396 (487)
Q Consensus 319 ~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~ 396 (487)
+||..+++|+|+.|||+.+ +++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+.+++++++++
T Consensus 859 ~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~ 936 (1001)
T 3haz_A 859 HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQ 936 (1001)
T ss_dssp EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCC
T ss_pred eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCC
Confidence 8888766799999999975 6788999999999999999996 79999999999999999999999999999999999
Q ss_pred eeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeC
Q 011397 397 AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 446 (487)
Q Consensus 397 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~ 446 (487)
+|+|+||+++.+...+.+||||+|.||+| +.+|++++++|++.|+|++..
T Consensus 937 aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 937 VGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred eeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999999876666778999999999999 568999999999999998875
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.4e-84 Score=683.56 Aligned_cols=429 Identities=17% Similarity=0.203 Sum_probs=387.5
Q ss_pred cchhhc-cccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397 4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (487)
Q Consensus 4 ~~~~~~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (487)
+++.++ +++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+
T Consensus 49 tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~ 127 (528)
T 3v4c_A 49 PAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRT 127 (528)
T ss_dssp CSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 456777 999999999999999999999999999999999999999999999999999999999999999998 899999
Q ss_pred HHHHHHHHHHHhh--hhcCCccccccc---cCCCcceEeeeeceEEEEEcCCCcchh--------hhhhhcCCeEEEeCC
Q 011397 83 KTSIKSALKELKH--WMTPEKAKTSIT---TFPSSAEIVPEPFGVVLIISPWNYPFF--------VGAIAAGNALVLKPS 149 (487)
Q Consensus 83 ~~~l~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~--------~~ALaaGN~Vvlkps 149 (487)
++.++++++.++. |........... ......+++++|+|||++|+|||||+. ++||++||+||+|||
T Consensus 128 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps 207 (528)
T 3v4c_A 128 TGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH 207 (528)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECC
Confidence 9999999998876 443221100000 012356789999999999999999975 789999999999999
Q ss_pred CCChHHHHHHHHHHhh----h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccc--cceeeec
Q 011397 150 EVAPASSSLLAKLVGE----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 220 (487)
Q Consensus 150 ~~~~~~~~~l~~~l~~----a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~--~p~~~e~ 220 (487)
+.+|.++.++++++.+ + +|+|+||+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.+++++ ||+++|+
T Consensus 208 ~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lEl 287 (528)
T 3v4c_A 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGEL 287 (528)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEec
Confidence 9999999999997754 4 99999999999 568899999997 999999999999999999999999 9999999
Q ss_pred CCCCcEEEcCCC---CHHHHHHHHHHHhcccCCCCccccCCEEEEcCC-cHHHHHHHHHHHHhhhcCCCCCCCCcccccC
Q 011397 221 GGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIV 296 (487)
Q Consensus 221 gG~~p~iV~~da---Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~ 296 (487)
|||||+||++|| |++.|++.+++++| +|+||.|+++++||||++ ++|+|+++|++++++++.+ +.+||++
T Consensus 288 GGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~ 361 (528)
T 3v4c_A 288 GSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGI 361 (528)
T ss_dssp CCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHH
T ss_pred CCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----CCCCHHH
Confidence 999999999999 88999999999999 999999999999999998 9999999999999988654 6899999
Q ss_pred CHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecEEEecCCCC---CcccccccccceeeeeeeCCHHHHHHHHhcCC
Q 011397 297 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 373 (487)
Q Consensus 297 ~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 373 (487)
+..+.+++.+++++ .++++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++
T Consensus 362 ~~~~~~~v~~~~~~--~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~ 437 (528)
T 3v4c_A 362 AKAYRDGQARFATR--NAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ 437 (528)
T ss_dssp HHHHHHHHHHHHTC--TTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHh--CCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCC
Confidence 88888888877642 57799999975 7999999999988887 89999999999999999999999999999999
Q ss_pred CCceEEEecC--CHHHHHHHHHhcc--eeeEEEcCCcccc-CCCCCCccc-CCCCCCCCcc--hHHHHHHhhhccEEE
Q 011397 374 KPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVHL-AVHSLPFGG-VQESGMGAYH--GKFSFDVFSHKKAVL 443 (487)
Q Consensus 374 ~gl~~~v~t~--d~~~~~~~~~~~~--~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~g~~~--g~~~l~~~~~~k~v~ 443 (487)
|||+++|||+ |.+++++++++++ +|+|+||+++.+. ..+.+|||| +|.||+|+++ |++|+++|++.|++.
T Consensus 438 ~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q 515 (528)
T 3v4c_A 438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQ 515 (528)
T ss_dssp CEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhh
Confidence 9999999999 8999999999997 9999999976532 468899999 9999999986 999999999998754
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1e-82 Score=670.41 Aligned_cols=426 Identities=16% Similarity=0.205 Sum_probs=382.3
Q ss_pred cchhh-ccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397 4 EEETK-KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (487)
Q Consensus 4 ~~~~~-~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (487)
+++.+ ++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus 16 tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~ 94 (510)
T 1ez0_A 16 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART 94 (510)
T ss_dssp TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 46678 7999999999999999999999999999999999999999999999999999999999999999887 899999
Q ss_pred HHHHHHHHHHHhh--hhcCCcccccc-c-cCC-CcceEeeeeceEEEEEcCCCcchh--------hhhhhcCCeEEEeCC
Q 011397 83 KTSIKSALKELKH--WMTPEKAKTSI-T-TFP-SSAEIVPEPFGVVLIISPWNYPFF--------VGAIAAGNALVLKPS 149 (487)
Q Consensus 83 ~~~l~~~~~~~~~--~~~~~~~~~~~-~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~--------~~ALaaGN~Vvlkps 149 (487)
++.++++++.+++ |.......... . ..+ ...+++++|+|||++|+|||||+. ++||++||+||+|||
T Consensus 95 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps 174 (510)
T 1ez0_A 95 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH 174 (510)
T ss_dssp HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECC
Confidence 9999999998875 54322110000 0 001 135789999999999999999964 789999999999999
Q ss_pred CCChHHHHHHHHHHhh----h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccc--cceeeec
Q 011397 150 EVAPASSSLLAKLVGE----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 220 (487)
Q Consensus 150 ~~~~~~~~~l~~~l~~----a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~--~p~~~e~ 220 (487)
+.+|+++.++++++.+ + +|+|++|+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.+++++ ||+++|+
T Consensus 175 ~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lEL 254 (510)
T 1ez0_A 175 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 254 (510)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEEC
Confidence 9999999999999854 4 89999999999 677899999997 999999999999999999999886 9999999
Q ss_pred CCCCcEEEcCCCCHH--HHHHHHHHHhcccCCCCccccCCEEEEcCC-cHHHHHHHHHHHHhhhcCCCCCCCCcccccCC
Q 011397 221 GGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVN 297 (487)
Q Consensus 221 gG~~p~iV~~daDl~--~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~ 297 (487)
|||||+||++|||+| .|++.+++++| +|+||.|+++++||||++ ++|+|+++|++++++++. ||+++
T Consensus 255 GGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~ 324 (510)
T 1ez0_A 255 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLT 324 (510)
T ss_dssp CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSS
T ss_pred CCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCC
Confidence 999999999999999 99999999999 999999999999999999 999999999999998864 57888
Q ss_pred HHHHHHHHHHHHHHHc--CCeEeeCCccCCCCceeecEEEecCCCC---CcccccccccceeeeeeeCCHHHHHHHHhcC
Q 011397 298 SNHFARLSKLLDDDKV--SGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSG 372 (487)
Q Consensus 298 ~~~~~~~~~~i~~a~~--~~~~~~gg~~~~~g~~~~Ptv~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 372 (487)
+.+.+++.++++++.. ++++++||. +|+|+.|||+.+++++ |++++||+||||++|++|+|+||||+++|++
T Consensus 325 ~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~ 401 (510)
T 1ez0_A 325 PGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML 401 (510)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC
Confidence 8889999999988873 578999987 3899999999988777 9999999999999999999999999999999
Q ss_pred CCCceEEEecCCH--HHHHHHHHhc--ceeeEEEcCCcccc-CCCCCCccc-CCCCCCCCc--chHHHHHHhhhccEEE
Q 011397 373 TKPLAAYLFTNNK--KLKQQFVETV--SAGGLVINDTAVHL-AVHSLPFGG-VQESGMGAY--HGKFSFDVFSHKKAVL 443 (487)
Q Consensus 373 ~~gl~~~v~t~d~--~~~~~~~~~~--~~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~g~~--~g~~~l~~~~~~k~v~ 443 (487)
+|||++||||+|. +.++++++++ ++|+|+||+++.+. ..+.+|||| +|.||.|+. +|.+|+++|++.|++.
T Consensus 402 ~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 402 AGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 9999999999987 7999999999 79999999865432 347899999 788998754 7999999999888765
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=5.5e-78 Score=626.51 Aligned_cols=403 Identities=19% Similarity=0.193 Sum_probs=322.1
Q ss_pred CHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCc----chhhHHHHHH-HHHHHHHH
Q 011397 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIYEVAL-LKTSIKSA 89 (487)
Q Consensus 15 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~ 89 (487)
....+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||. .++...|+.. ++..++++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~ 91 (468)
T 1vlu_A 12 HMSSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVM 91 (468)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHH
Confidence 344589999999999999999999999999999999999999999999999999998 8875578988 88999999
Q ss_pred HHHHhhhhcCCccccc--c-c--cCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHHHHHH
Q 011397 90 LKELKHWMTPEKAKTS--I-T--TFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPASSSLL 159 (487)
Q Consensus 90 ~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~~~~l 159 (487)
++.++.+......... . . ..+...+++++|+|||++|+||| |.. ++||++||+||+|||+.+|.++..+
T Consensus 92 a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 92 LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-PEVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-THHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-hHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 9998887633221000 0 0 01235678999999999999999 933 8999999999999999999999999
Q ss_pred HHHHh----h----h-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEE
Q 011397 160 AKLVG----E----Y-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228 (487)
Q Consensus 160 ~~~l~----~----a-lP~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV 228 (487)
++++. + + +|+|++|+|+ +. +.++.|+.|+ ||.|+||||+++|+.|++.+ +||+++|+|||||+||
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV 246 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYL 246 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEE
Confidence 99995 7 7 9999999999 65 6788999997 99999999999999999876 6999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcC---CCCCCCCcccccCCHHHHHHHH
Q 011397 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLS 305 (487)
Q Consensus 229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~ 305 (487)
++|||++.|++.+++++| +|+| .|+++++||||+++ |+|+++|.++++++++ |||.+ .
T Consensus 247 ~~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~ 307 (468)
T 1vlu_A 247 DEDADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------K 307 (468)
T ss_dssp CTTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------H
T ss_pred CCCCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------h
Confidence 999999999999999999 9999 99999999999999 9999999999999987 76532 3
Q ss_pred HH-HHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 011397 306 KL-LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 384 (487)
Q Consensus 306 ~~-i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d 384 (487)
++ ++++. ++++||. | +.||++ +++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 308 ~~~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 376 (468)
T 1vlu_A 308 TAYFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTEN 376 (468)
T ss_dssp HHHHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSC
T ss_pred cccccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCC
Confidence 45 66554 4667775 4 689987 78899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceeeEEEcCCccccCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhccEEEEeCCCCCCCccCCCCc
Q 011397 385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG-----GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYT 459 (487)
Q Consensus 385 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfG-----G~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~ 459 (487)
.+.++++++++++|+|+||+++. ..+.+||| |+|.||+|++ |.+|+++|++.|+|..+.. +.+ +||+
T Consensus 377 ~~~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~----~~r-~py~ 448 (468)
T 1vlu_A 377 KANAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG----QVA-SDYL 448 (468)
T ss_dssp HHHHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECSS----CCS-CCC-
T ss_pred HHHHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC----CcC-cccc
Confidence 99999999999999999999764 35788999 9999999999 9999999999999988753 344 7887
Q ss_pred h
Q 011397 460 K 460 (487)
Q Consensus 460 ~ 460 (487)
.
T Consensus 449 ~ 449 (468)
T 1vlu_A 449 G 449 (468)
T ss_dssp -
T ss_pred c
Confidence 3
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.5e-76 Score=617.01 Aligned_cols=410 Identities=14% Similarity=0.187 Sum_probs=356.3
Q ss_pred hccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHH
Q 011397 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK 87 (487)
Q Consensus 8 ~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 87 (487)
+..++..+.+++++++++|++||+.|+.++.++|.++|+++++.|.+++++|++++++|+||+..+++..+....++.+
T Consensus 3 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~- 81 (464)
T 3k9d_A 3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHV- 81 (464)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH-
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH-
Confidence 4566778899999999999999999999999999999999999999999999999999999999887633443333333
Q ss_pred HHHHHHhhhhcCCccccc-cccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHH
Q 011397 88 SALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLA 160 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~ 160 (487)
..|.+....... ....+...+.+++|+|||++|+|||||+. ++||++||+||+|||+.+|.++..++
T Consensus 82 ------~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~ 155 (464)
T 3k9d_A 82 ------YNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETV 155 (464)
T ss_dssp ------HHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH
T ss_pred ------HHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHH
Confidence 333322211111 11234577889999999999999999998 89999999999999999999999876
Q ss_pred HH----Hhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecC-CCCcEEEcCCC
Q 011397 161 KL----VGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG-GKSPVVFDSGI 232 (487)
Q Consensus 161 ~~----l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~g-G~~p~iV~~da 232 (487)
++ +.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+. +++.+++++||+ +|+| ||+|+||++||
T Consensus 156 ~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dA 230 (464)
T 3k9d_A 156 RIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSA 230 (464)
T ss_dssp HHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTS
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCC
Confidence 65 5666 99999999999 678899999997 99999999997 456677889999 6777 99999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHH-------hhhcCCCCC-C-CCcccccCCHHHHHH
Q 011397 233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL-------ENFYGKNPL-E-SKDLSRIVNSNHFAR 303 (487)
Q Consensus 233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~p~-~-~~~~gpl~~~~~~~~ 303 (487)
|++.|++.+++|+| +|+||.|+++++||||+++||+|+++|+++. +.+++|+|. + ++++||+++..+.++
T Consensus 231 Dl~~Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~ 309 (464)
T 3k9d_A 231 NIPRAVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQH 309 (464)
T ss_dssp CHHHHHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHH
Confidence 99999999999999 9999999999999999999999999999986 456778876 4 789999999999999
Q ss_pred HHHHHHHHHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHH----HHHhcCCCCceE
Q 011397 304 LSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAA 378 (487)
Q Consensus 304 ~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~ 378 (487)
+.++++.+.. ++++++||.. ++++++++. +|+||||++|++|+|++||| +++|++++||++
T Consensus 310 i~~~~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a 375 (464)
T 3k9d_A 310 IANLAGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTL 375 (464)
T ss_dssp HHHHTTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHhhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeE
Confidence 9999987654 6788888753 467788755 89999999999999999997 799999999999
Q ss_pred EEecCCHHHHHHHHHhcceeeEEEcCCccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 379 YLFTNNKKLKQQFVETVSAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 379 ~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
+|||+|.+.++++++++++|+|+||+++.+ ...+.+|||| +.+|.|+++|++|+++|++.|+|...
T Consensus 376 ~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 376 IIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred EEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 999999999999999999999999997643 2578999998 78999999999999999999998764
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-77 Score=620.47 Aligned_cols=408 Identities=20% Similarity=0.176 Sum_probs=328.6
Q ss_pred ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhc-------CCCcc---
Q 011397 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL-------DKPEL--- 72 (487)
Q Consensus 3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~~~--- 72 (487)
++.+.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+ |||..
T Consensus 15 ~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl 94 (463)
T 2h5g_A 15 TENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRL 94 (463)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhh
Confidence 45788999999999999999999999999999999999999999999999999999999999999 69987
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEc---CCCcchh-hhhhhcCCeEEEe
Q 011397 73 -ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS---PWNYPFF-VGAIAAGNALVLK 147 (487)
Q Consensus 73 -~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~---p~n~P~~-~~ALaaGN~Vvlk 147 (487)
++. .|+..+++.++++++.+.++...... ......+...+++++|+|||++|+ |||||.. ++||++||+||+|
T Consensus 95 ~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~~~~P~GVv~~I~p~nP~n~p~~~a~ALaaGN~VVlK 172 (463)
T 2h5g_A 95 SLST-SKLNSLAIGLRQIAASSQDSVGRVLR-RTRIAKNLELEQVTVPIGVLLVIFESRPDCLPQVAALAIASGNGLLLK 172 (463)
T ss_dssp CCCH-HHHHHHHHHHHHHHHHCTTSTTCEEE-EEEEETTEEEEEEEEECCEEEEEESSCTTHHHHHHHHHHHHTCEEEEE
T ss_pred hhhH-HHHHHHHHHHHHHHHhhHhhcCcccc-cccCCCCceeEEEEEcCceEEEEecCCcHHHHHHHHHHHHcCCEEEEE
Confidence 566 89999999999999887776543211 100011235678999999999999 5555533 9999999999999
Q ss_pred CCCCChHHHHHHHHHHhhhc----CCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCC
Q 011397 148 PSEVAPASSSLLAKLVGEYM----DLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 222 (487)
Q Consensus 148 ps~~~~~~~~~l~~~l~~al----P~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG 222 (487)
||+.+|.++.++++++.+++ |+|+||+|+|+.+.+..|+.|+ ||.|+||||+.+|+.|++.++ +||+++|+||
T Consensus 173 ps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGG 250 (463)
T 2h5g_A 173 GGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEG 250 (463)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCC
T ss_pred CCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCC
Confidence 99999999999999999985 6999999999666789999997 999999999999999999887 8999999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHH
Q 011397 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFA 302 (487)
Q Consensus 223 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~ 302 (487)
|||+||++|||++.|++.+++++| .| ||.|+++++||||++++| ||+ ++
T Consensus 251 k~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~~ 299 (463)
T 2h5g_A 251 ICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TPL-----FD 299 (463)
T ss_dssp CEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SHH-----HH
T ss_pred cceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hHH-----HH
Confidence 999999999999999999999999 98 999999999999999998 232 22
Q ss_pred HHHHHHHHHH-cCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEe
Q 011397 303 RLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 381 (487)
Q Consensus 303 ~~~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 381 (487)
++++++. ++++++.|+.....++|+ +++|++++||+||||++|++|+|+||||+++|++++||+++||
T Consensus 300 ---~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~ 368 (463)
T 2h5g_A 300 ---QIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIV 368 (463)
T ss_dssp ---HHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEE
T ss_pred ---HHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Confidence 2355554 466777444322234442 5789999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC--Cc--chHHHHHHhhhccEEEEeCCCCCCCccCCC
Q 011397 382 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AY--HGKFSFDVFSHKKAVLSRGFIGDVPVRYPP 457 (487)
Q Consensus 382 t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g--~~--~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~ 457 (487)
|+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| ++ +|.+|+++|++.|+|..+.. ..+ +|
T Consensus 369 t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~----~~r-~~ 441 (463)
T 2h5g_A 369 TEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD----HVV-SD 441 (463)
T ss_dssp CSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS----CCG-GG
T ss_pred eCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC----ccc-CC
Confidence 99999999999999999999999764 3678999999999999 65 89999999999999988763 334 67
Q ss_pred CchhHH
Q 011397 458 YTKGKL 463 (487)
Q Consensus 458 ~~~~~~ 463 (487)
|+..|.
T Consensus 442 y~~~~~ 447 (463)
T 2h5g_A 442 FSEHGS 447 (463)
T ss_dssp GSTTSS
T ss_pred ccccch
Confidence 775543
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=2e-74 Score=597.41 Aligned_cols=401 Identities=18% Similarity=0.194 Sum_probs=319.2
Q ss_pred CCccchhhccccCCC-HHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCc----chhh
Q 011397 1 MGSEEETKKKNEVFD-AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESS 75 (487)
Q Consensus 1 ~~~~~~~~~~v~~~~-~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~ 75 (487)
|||-+--+-..+..+ .+++++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+||+. .++.
T Consensus 9 ~~~~~~~~~~p~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~ 88 (444)
T 4ghk_A 9 MGTLEAQTQGPGSMDIDQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAF 88 (444)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSH
T ss_pred cchhhhhhcCCccccHHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHH
Confidence 566555555555554 57899999999999999999999999999999999999999999999999999985 4655
Q ss_pred HH-------HHHHHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCe
Q 011397 76 IY-------EVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNA 143 (487)
Q Consensus 76 ~~-------ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~ 143 (487)
.. |+..+++.+++++...+.. ...........+...+++++|+|||++|+||| |.. ++||++||+
T Consensus 89 ~~~~~~~~~~v~~~~~~l~~~a~~~~~~--g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P~~~~~~~~~ALaaGN~ 165 (444)
T 4ghk_A 89 VDRLTLSDKALKTMVEGLRQVATLPDPI--GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-PNVTIDAAALCLKSGNA 165 (444)
T ss_dssp HHHHCCCTTHHHHHHHHHHHHHHSCCCT--TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-HHHHHHHHHHHHHTTCE
T ss_pred HHHhhccHHHHHHHHHHHHHHHhhcccc--CccCCcccCCCCccceEEEeccEEEEEEeCCC-cHHHHHHHHHHHHcCCE
Confidence 32 6777777777775433211 11111000012346788999999999999998 855 899999999
Q ss_pred EEEeCCCCChHHHHHHHHHH----hhh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccc
Q 011397 144 LVLKPSEVAPASSSLLAKLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP 215 (487)
Q Consensus 144 Vvlkps~~~~~~~~~l~~~l----~~a-lP~g~v~~v~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p 215 (487)
||+|||+.+|.++..+++++ .++ +|+|++|+|+| +.+ .+..|..|+ ||.|+||||+.+|+.+++.+ +||
T Consensus 166 VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~p 242 (444)
T 4ghk_A 166 TILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVP 242 (444)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSC
T ss_pred EEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCC
Confidence 99999999999999999997 455 99999999998 554 566777786 99999999999999998765 699
Q ss_pred eeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcC---CCCCCCCcc
Q 011397 216 VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDL 292 (487)
Q Consensus 216 ~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~ 292 (487)
+++|+|||||+||++|||++.|++.+++++| +|+| .|+++++||||++++|+|+++|+++++++++ |||.
T Consensus 243 v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----- 315 (444)
T 4ghk_A 243 MIKHLDGICHVYVDDRASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----- 315 (444)
T ss_dssp BCCCCCCCCEEEECTTCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----
T ss_pred EEEEcCCcCeEEECCCCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----
Confidence 9999999999999999999999999999999 9999 9999999999999999999999999999887 6542
Q ss_pred cccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcC
Q 011397 293 SRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 372 (487)
Q Consensus 293 gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 372 (487)
..++++++. .| ++ +++++++++||+||||++|++|+|+||||+++|++
T Consensus 316 -----------~~~~i~~a~-------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~ 363 (444)
T 4ghk_A 316 -----------ARAVLEAAG-------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEY 363 (444)
T ss_dssp -----------HHHHHHHTT-------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHH
T ss_pred -----------HHHHHHhcc-------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhC
Confidence 245666532 12 11 35678999999999999999999999999999999
Q ss_pred CCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEeCCC
Q 011397 373 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRGFI 448 (487)
Q Consensus 373 ~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~~~~k~v~~~~~~ 448 (487)
+|||++||||+|.+.++++++++++|+|+||+++. ..+.+||||.+.||+| +++|++|+++|++.|+|+...++
T Consensus 364 ~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~~ 441 (444)
T 4ghk_A 364 GSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHGE 441 (444)
T ss_dssp SCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEEE
T ss_pred CCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCCc
Confidence 99999999999999999999999999999999764 3578999999999987 67899999999999999887543
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=3.4e-74 Score=592.85 Aligned_cols=387 Identities=19% Similarity=0.243 Sum_probs=327.7
Q ss_pred cCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCc----chhhH-------HHHH
Q 011397 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVA 80 (487)
Q Consensus 12 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~ 80 (487)
.....+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+. .++.. .|+.
T Consensus 9 ~~~~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~ 88 (427)
T 1o20_A 9 HHHHMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRID 88 (427)
T ss_dssp -----CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHH
Confidence 345667899999999999999999999999999999999999999999999999999985 55532 5788
Q ss_pred HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHH
Q 011397 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPAS 155 (487)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~ 155 (487)
.+++.++++++..+. . ...........+...+++++|+|||++|+||| |.. ++||++||+||+|||+.+|.+
T Consensus 89 ~~~~~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~~~~~~~~~~ALaaGNtVVlKps~~tp~t 165 (427)
T 1o20_A 89 EMIKACETVIGLKDP-V-GEVIDSWVREDGLRIARVRVPIGPIGIIYESR-PNVTVETTILALKSGNTILLRGGSDALNS 165 (427)
T ss_dssp HHHHHHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECCCEEEECCSC-THHHHHHHHHHHHTTCCEEEECCGGGHHH
T ss_pred HHHHHHHHHHhcccc-c-CccccccccCCCceeEEEeecceeEEEEecCC-hHHHHHHHHHHHHcCCEEEEECCHhHHHH
Confidence 888888887654322 1 11100000011234678999999999999997 433 899999999999999999999
Q ss_pred HHHHHHHHh----hh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEE
Q 011397 156 SSLLAKLVG----EY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 227 (487)
Q Consensus 156 ~~~l~~~l~----~a-lP~g~v~~v~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~i 227 (487)
+.++++++. ++ +|+|++|+|+| +.+ .+..|..|+ ||.|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 166 ~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~i 242 (427)
T 1o20_A 166 NKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEE
Confidence 999999997 44 89999999998 554 567777786 99999999999999999877 599999999999999
Q ss_pred EcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHH
Q 011397 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL 307 (487)
Q Consensus 228 V~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~ 307 (487)
|++|||+|.|++.+++++| +|+| .|+++++||||++++|+|+++|++++++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------- 297 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE----------------------- 297 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------
T ss_pred EeCCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------
Confidence 9999999999999999999 9999 99999999999999999999999999887542
Q ss_pred HHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397 308 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387 (487)
Q Consensus 308 i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 387 (487)
+.||... .+ |+ ||| +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus 298 ----------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 361 (427)
T 1o20_A 298 ----------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSN 361 (427)
T ss_dssp ----------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHH
T ss_pred ----------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHH
Confidence 1222211 12 33 885 34578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEeCC
Q 011397 388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRGF 447 (487)
Q Consensus 388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~~~~k~v~~~~~ 447 (487)
++++++++++|+|+||++.. ..+.+||||.|.||+| +++|++|+++|++.|+|...+.
T Consensus 362 a~~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 362 AKKFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp HHHHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 99999999999999998654 4678999999999987 4679999999999999988764
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.7e-73 Score=590.71 Aligned_cols=406 Identities=19% Similarity=0.206 Sum_probs=326.8
Q ss_pred ccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHH
Q 011397 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (487)
Q Consensus 11 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 90 (487)
++..+.+|+++++++|++||+.|+.+++++|.++|+++++.+++++++|++++++|+|||..+++..|+..+.+.+.
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~--- 77 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIY--- 77 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH---
Confidence 46789999999999999999999999999999999999999999999999999999999999987446555555442
Q ss_pred HHHhhhhcCCccccccc-cCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHH
Q 011397 91 KELKHWMTPEKAKTSIT-TFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLV 163 (487)
Q Consensus 91 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l 163 (487)
.++.......... ......+.+++|+|||++|+|||||+. ++||++||+||+|||+.+|.++..+++++
T Consensus 78 ----~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 78 ----NKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp ----HHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred ----HHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 2222221111111 122356889999999999999999998 89999999999999999999999999887
Q ss_pred h----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397 164 G----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 236 (487)
Q Consensus 164 ~----~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~ 236 (487)
. ++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.++ +.+++++||+++|+|||||+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 6 45 99999999999 678899999997 9999999999854 456778999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHc-CC
Q 011397 237 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SG 315 (487)
Q Consensus 237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~ 315 (487)
|++.+++|+| +|+||.|+++++||||+++||+|+++|+++ +||++++.+.+++.++++++.. ++
T Consensus 230 Aa~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999 999999999999999999999999999864 4899999999999999976433 34
Q ss_pred eEeeCCccC----CCCceeecEE-------EecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCC----CCceEEE
Q 011397 316 KIVHGGERD----KNKLRIAPTL-------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT----KPLAAYL 380 (487)
Q Consensus 316 ~~~~gg~~~----~~g~~~~Ptv-------~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v 380 (487)
++ +||... ..|+|++||+ +.++++++++.+ |+||||++|++|+|++|||+++|++. +||+++|
T Consensus 295 ~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i 372 (452)
T 3my7_A 295 KI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGL 372 (452)
T ss_dssp GG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred eE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEE
Confidence 44 576542 2589999997 668889999775 89999999999999999999999974 9999999
Q ss_pred ecCCHHHHHH---HHHhcceeeEEEcCCcccc---------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397 381 FTNNKKLKQQ---FVETVSAGGLVINDTAVHL---------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445 (487)
Q Consensus 381 ~t~d~~~~~~---~~~~~~~g~v~iN~~~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 445 (487)
||+|.+.+++ +++++++|+|+||+++.+. ..+.+++ |++..|.+...++.+.++|.+.|+|..+
T Consensus 373 ~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 373 YTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp ESCTTTCHHHHHHHHHHCCCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECC
T ss_pred EcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEee
Confidence 9999777777 9999999999999965321 0111111 2222333333445666777777776543
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.60 E-value=0.048 Score=54.10 Aligned_cols=330 Identities=16% Similarity=0.173 Sum_probs=171.4
Q ss_pred hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhc-CCC------cchhhHHHHHHH--------HHHHHHHHHHHhhh
Q 011397 32 SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL-DKP------ELESSIYEVALL--------KTSIKSALKELKHW 96 (487)
Q Consensus 32 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-Gk~------~~~a~~~ev~~~--------~~~l~~~~~~~~~~ 96 (487)
.++..+..+-.+..+.+.+.++++.|+=....++.. |.. +.-.. .|+..+ .+.|+...++++.+
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~-~ei~~A~~~l~~~~~~ai~~A~~~I~~f 104 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPR-DVLEAAWQALPAEQAKALREAAERIRAY 104 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECH-HHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCH-HHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 455556666666777777777777665444444432 111 11111 333322 22344444444444
Q ss_pred hcCCccccc--cccCCCcceEeeeeceEEEEEcCCC---cchh-----hhhhhcCCe--EEEeCCCCChHHHHHHHHHHh
Q 011397 97 MTPEKAKTS--ITTFPSSAEIVPEPFGVVLIISPWN---YPFF-----VGAIAAGNA--LVLKPSEVAPASSSLLAKLVG 164 (487)
Q Consensus 97 ~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~-----~~ALaaGN~--Vvlkps~~~~~~~~~l~~~l~ 164 (487)
...+..... ....+.....++.|+--|++..|.- ||-. +||-.+|.. |+.-|.+........|+.+-.
T Consensus 105 h~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l 184 (423)
T 4gic_A 105 AERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYI 184 (423)
T ss_dssp HHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHH
T ss_pred HHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHh
Confidence 322221111 1122345667889999999999944 6655 999999995 334454332222222222111
Q ss_pred hhcCCCcEEEEe-CChHhHHHHHh----CC-CCeEEEecCHHHHHHHHHHHhccccceeee-cCCCCc--EEEcCCCCHH
Q 011397 165 EYMDLSSIRVVE-GAVAETSALLD----QK-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGINLK 235 (487)
Q Consensus 165 ~alP~g~v~~v~-g~~~~~~~L~~----~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e-~gG~~p--~iV~~daDl~ 235 (487)
.|+=.+.. |+.....+|.- -+ ||.|+=.|..=+..+=..... .|-.. ..|.+= +|-|++||.+
T Consensus 185 ----~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~~a~p~ 256 (423)
T 4gic_A 185 ----SGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDGRTDPD 256 (423)
T ss_dssp ----HTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECSCSCHH
T ss_pred ----cCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCCCCCHH
Confidence 12222332 34444455542 23 999998887654332111111 12122 235554 4446668999
Q ss_pred HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCC
Q 011397 236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG 315 (487)
Q Consensus 236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~ 315 (487)
..+..++.-+= .+. ..+.++|..+ ++|.+++.+.+.+.... +.. .+...+-++. .+
T Consensus 257 ~vAaDLlsQAE-Hd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~----------l~r---~~i~~~sl~~---~g 312 (423)
T 4gic_A 257 WIAMDLFSQAE-HDE-----DAQAILISPD--AAHLEAVQASIERLLPG----------MER---AEVIRTSLER---RG 312 (423)
T ss_dssp HHHHHHHHHHT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGG----------CTT---HHHHHHHHHH---HC
T ss_pred HHHHHHHHhhc-cCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhh----------Ccc---HHHHHHHHhc---Cc
Confidence 99988887765 322 2345677666 45666666655543211 111 1112222211 01
Q ss_pred eEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 011397 316 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 395 (487)
Q Consensus 316 ~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~ 395 (487)
.++.++|++|+++++|..-.- -.-|.++|.. .+..++
T Consensus 313 ---------------------------------------~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i 349 (423)
T 4gic_A 313 ---------------------------------------GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESI 349 (423)
T ss_dssp ---------------------------------------EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGC
T ss_pred ---------------------------------------eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhC
Confidence 124568999999999995333 4567888875 567777
Q ss_pred -ceeeEEEcCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 011397 396 -SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442 (487)
Q Consensus 396 -~~g~v~iN~~~~~~-------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v 442 (487)
++|.|++..++.-. .++.+|-+ |..++.+.-+.+.|..+-++
T Consensus 350 ~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 350 RNAGAIFMGRYTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp CCCSEEEEC----------------CCCCT-----TGGGTCCCCCGGGGEEEEEE
T ss_pred cEeceeecCCCCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeE
Confidence 48999998754211 23445544 55677777778888766554
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=96.19 E-value=1.2 Score=44.39 Aligned_cols=323 Identities=18% Similarity=0.197 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCC----cchhhHHHHHHH--------HHHHHHHHHHHhhhhcCCcccc-c
Q 011397 39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKT-S 105 (487)
Q Consensus 39 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~~a~~~ev~~~--------~~~l~~~~~~~~~~~~~~~~~~-~ 105 (487)
.+-.+..+.+.+.++++.|+=...-++..-+. +.-.. .|+..+ .+.|+...++++.+...+.... .
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~-~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSA-EEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCCH-HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccCH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 45556677777777777776555555444221 11111 344333 3445556666666554443221 1
Q ss_pred c-ccCCCcceEeeeeceEEEEEcCC---Ccchh-----hhhhhcCCeE--EEeCCCCChHHHHHHHHHHhhhcCCCcEEE
Q 011397 106 I-TTFPSSAEIVPEPFGVVLIISPW---NYPFF-----VGAIAAGNAL--VLKPSEVAPASSSLLAKLVGEYMDLSSIRV 174 (487)
Q Consensus 106 ~-~~~~~~~~~~~~P~GVv~~i~p~---n~P~~-----~~ALaaGN~V--vlkps~~~~~~~~~l~~~l~~alP~g~v~~ 174 (487)
. ...+.....+..|+--|++..|. -||-. +||-.+|+.= ++-|+.-.|.+ |+.+- -.|+=.+
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~AA~----l~Gv~eI 181 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEI---LYAAQ----LCGVQDV 181 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECSSCCHHH---HHHHH----HTTCCEE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCCCCCHHH---HHHHH----HcCCCEE
Confidence 1 11233566788999999999995 35544 8999999843 34454222222 22111 1122223
Q ss_pred Ee-CChHhHHHHH---hC-C-CCeEEEecCHHHHHHHHHHHhccccceeee-cCCCCc--EEEcCCCCHHHHHHHHHHHh
Q 011397 175 VE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGINLKVACRRMIMGK 245 (487)
Q Consensus 175 v~-g~~~~~~~L~---~~-~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e-~gG~~p--~iV~~daDl~~aa~~i~~~~ 245 (487)
.. |+.....+|. +. + ||.|+=.|..=+..+=..-....+ .|-.. ..|.+= +|-|++||.+..+..++.-+
T Consensus 182 y~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQA 260 (434)
T 1kae_A 182 FNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQA 260 (434)
T ss_dssp EECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred eecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 32 3444445554 12 3 999988887654321111100011 12122 235554 44466799999998888766
Q ss_pred cccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCC
Q 011397 246 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 325 (487)
Q Consensus 246 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~ 325 (487)
= .+. ..+.++|..+ +++.+++.+.+.+.... +.. . +.++.+.
T Consensus 261 E-Hd~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~----------lpr---~----~ia~~sl------------- 302 (434)
T 1kae_A 261 E-HGP-----DSQVILLTPA--ADMARRVAEAVERQLAE----------LPR---A----ETARQAL------------- 302 (434)
T ss_dssp T-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHHTT----------CTT---H----HHHHHHH-------------
T ss_pred c-cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CCh---H----HHHHHHH-------------
Confidence 4 322 2345666665 45666665555432111 001 1 1111111
Q ss_pred CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeeEEEcC
Q 011397 326 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVIND 404 (487)
Q Consensus 326 ~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN~ 404 (487)
..- .++.++|++||++++|..-.- -.-|.++|.. .+..++ ++|.|++..
T Consensus 303 -------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~ 352 (434)
T 1kae_A 303 -------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGD 352 (434)
T ss_dssp -------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEEST
T ss_pred -------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCC
Confidence 112 346679999999999995433 4678899984 666777 589999997
Q ss_pred Cccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397 405 TAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443 (487)
Q Consensus 405 ~~~~-------~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~ 443 (487)
++.- ..|+.+|-+ |..++.+.-+.+.|.++-++.
T Consensus 353 ~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 353 WSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred CCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence 5421 135666665 456667777788887765543
No 55
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=44.01 E-value=91 Score=27.01 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=30.7
Q ss_pred hhhcCCeEEEeCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCC
Q 011397 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGA 178 (487)
Q Consensus 137 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g~v~~v~g~ 178 (487)
.-.+||-+|+|-.|-+ +..++.++... +|++++..|.|+
T Consensus 113 v~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 113 VDHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp EEECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred EeecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 3347999999987544 67788888886 888899998875
No 56
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=41.27 E-value=1.2e+02 Score=23.24 Aligned_cols=57 Identities=12% Similarity=0.138 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHH--cCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcC
Q 011397 297 NSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 372 (487)
Q Consensus 297 ~~~~~~~~~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 372 (487)
+++.+++..+...... .+|+++.-|.. |.++.+.. .+-+.|+.|+|.+.|.++.|+.
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~--------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~ 74 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS--------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSP 74 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC--------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC--------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCH
Confidence 3444444444443332 47777765543 34554321 2377899999999999998864
No 57
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=39.59 E-value=29 Score=31.35 Aligned_cols=65 Identities=6% Similarity=0.126 Sum_probs=43.4
Q ss_pred cchhhhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHH
Q 011397 131 YPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSR 200 (487)
Q Consensus 131 ~P~~~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~ 200 (487)
|...+..+.+||-||++.+. +.....+..++...+|.+++++++.+.+- .....-+.+.++.+..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s~~Y---~~~~~cnilgls~~v~ 85 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYSSQY---EEAYRCNFLGLSPHVQ 85 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEESSC---CCTTTCSEEEECTTCC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccchhh---cchhheeeecCCCCcc
Confidence 33337788999999999875 45555667888888999999998653221 1011246666665543
No 58
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=33.76 E-value=1.2e+02 Score=24.32 Aligned_cols=71 Identities=7% Similarity=0.061 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHcCCeEeeCCccC--CCCceee-----cEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcC
Q 011397 300 HFARLSKLLDDDKVSGKIVHGGERD--KNKLRIA-----PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 372 (487)
Q Consensus 300 ~~~~~~~~i~~a~~~~~~~~gg~~~--~~g~~~~-----Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 372 (487)
..+...+++++..+.|.++.|+... ..+..++ |+|.++.-.+ ..|..| =+.|+.++|.|||++++.+.
T Consensus 31 ~~~~~~~~~~~l~~~G~lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lg-G~~iie~~s~deA~e~A~~~ 105 (124)
T 1s7i_A 31 IVDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLG-GFYLIEARDLNQALQIAAKI 105 (124)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEE-EEEEEEESSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCEEEecCcCCCCcceEEEEecCCceeEecCCCcC----Ccccce-eEEEEEeCCHHHHHHHHHhC
Confidence 3445556666655556666544322 1233332 3343322111 345555 45677899999999999887
Q ss_pred CCC
Q 011397 373 TKP 375 (487)
Q Consensus 373 ~~g 375 (487)
+..
T Consensus 106 P~~ 108 (124)
T 1s7i_A 106 PPG 108 (124)
T ss_dssp GGG
T ss_pred Ccc
Confidence 653
No 59
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=28.21 E-value=35 Score=27.98 Aligned_cols=46 Identities=20% Similarity=0.267 Sum_probs=32.2
Q ss_pred CcEEEEeCChHh-HHHHHh-CCCCeEEEecCHHHHHHHHHHHhccccc
Q 011397 170 SSIRVVEGAVAE-TSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTP 215 (487)
Q Consensus 170 g~v~~v~g~~~~-~~~L~~-~~v~~v~ftGs~~~g~~v~~~a~~~~~p 215 (487)
|.+++++|+.+. ...++. .++.++++||+......+.+.+.+...|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCe
Confidence 578888886543 334444 4589999999987777777777665554
No 60
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=25.20 E-value=57 Score=26.94 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=38.5
Q ss_pred HHhhh-cCCCcEEEEeCC------hHhHHHHHhCCCCeEEEecCH-----HHHHHHHHHHhccccceeeec
Q 011397 162 LVGEY-MDLSSIRVVEGA------VAETSALLDQKWDKICYTGNS-----RVARIVMAAAAKHLTPVLLEL 220 (487)
Q Consensus 162 ~l~~a-lP~g~v~~v~g~------~~~~~~L~~~~v~~v~ftGs~-----~~g~~v~~~a~~~~~p~~~e~ 220 (487)
.|++. +|...|+-++.+ +...+.+.+..||+|++|-+. .-+..|.+.|..+..|++..+
T Consensus 62 ~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 62 WLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 33444 776555544422 233444444469999998655 367788899999889988665
No 61
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=24.86 E-value=85 Score=21.80 Aligned_cols=37 Identities=8% Similarity=-0.045 Sum_probs=27.7
Q ss_pred HHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 011397 24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60 (487)
Q Consensus 24 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 60 (487)
+.++.....|..++.++|..........-.++..++.
T Consensus 28 ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 28 EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466667889999999999888777766666655554
No 62
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=24.62 E-value=78 Score=26.61 Aligned_cols=94 Identities=13% Similarity=0.167 Sum_probs=57.3
Q ss_pred hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhC-CCCeEEEecC-------HHHHHHH
Q 011397 135 VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG-AVAETSALLDQ-KWDKICYTGN-------SRVARIV 205 (487)
Q Consensus 135 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~-~v~~v~ftGs-------~~~g~~v 205 (487)
...+.+|..++- |.-|+..|.+. ..+|...++=++- +......++.. .||+|+||-+ ..-+..|
T Consensus 33 ~~~ll~Gf~l~A-----T~gTa~~L~e~--~Gl~v~~v~k~~eGG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~I 105 (152)
T 1b93_A 33 HQPLLEQHVLYA-----TGTTGNLISRA--TGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKAL 105 (152)
T ss_dssp THHHHTTSEEEE-----ETTHHHHHHHH--HCCCCEEECCGGGTHHHHHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHH
T ss_pred HHHHhCCCEEEE-----ccHHHHHHHHH--hCceeEEEEecCCCCCchHHHHHHCCCccEEEEcCCcccCCcccccHHHH
Confidence 455566776664 33455444441 2377554442221 22233444444 6999999876 4577889
Q ss_pred HHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCC
Q 011397 206 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNG 251 (487)
Q Consensus 206 ~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~G 251 (487)
.+.|..+..|+..-+ ..++.++.+.+ ++..
T Consensus 106 rR~A~~~~IP~~T~l---------------atA~a~v~ai~-~~~~ 135 (152)
T 1b93_A 106 LRLATVWNIPVATNV---------------ATADFIIQSPH-FNDA 135 (152)
T ss_dssp HHHHHHTTCCEESSH---------------HHHHHHHTSGG-GGSC
T ss_pred HHHHHHcCCCEEeCH---------------HHHHHHHHHHh-cccc
Confidence 999999888887554 34667777776 6553
No 63
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=22.39 E-value=2.5e+02 Score=21.07 Aligned_cols=58 Identities=16% Similarity=0.159 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHH--cCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCC
Q 011397 297 NSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 373 (487)
Q Consensus 297 ~~~~~~~~~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 373 (487)
+++.++...+...... -||+++..| . +.++.+.. -..-+.|+.|+|.+.|.++.|+..
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~--------~~~lEG~~----------~~~~~viieFps~~aa~a~y~Spe 74 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-S--------VEQLHGKF----------EHKAQVILEFPSREDAYNWYHSEE 74 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-E--------CEEEESCC----------CCSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-c--------cccccCCC----------CCCeEEEEECCCHHHHHHHHCCHH
Confidence 4444444444444432 367777655 3 24444321 125889999999999999988743
No 64
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.30 E-value=1.8e+02 Score=22.19 Aligned_cols=42 Identities=5% Similarity=-0.236 Sum_probs=30.5
Q ss_pred HHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhc
Q 011397 26 LRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL 67 (487)
Q Consensus 26 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~ 67 (487)
++.....|..++.++|..........-+++..++..--....
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~ 90 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLV 90 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 455557899999999999888877777777666665444433
No 65
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=22.24 E-value=56 Score=21.27 Aligned_cols=28 Identities=25% Similarity=0.423 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHhhcC
Q 011397 41 RVSQLKSLMKMLNEREPDIVDALRQDLD 68 (487)
Q Consensus 41 R~~~L~~~a~~l~~~~~~la~~~~~e~G 68 (487)
..++|..+...|.+-++++.+++..|..
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888899999988999888877654
Done!