BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011398
(487 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 246/499 (49%), Positives = 295/499 (59%), Gaps = 106/499 (21%)
Query: 54 SGFKSILDTDWFLNSTLNNP-PQDFTNTTGLLETHQELRAFNAFQ---ETNLFFQ----- 104
S FK +L+ DWF + N P PQD +L+ + R F F NL Q
Sbjct: 37 SQFKPMLEGDWF---SSNQPHPQDLQ----MLQNQPDFRYFGGFPFNPNDNLLLQHSIDS 89
Query: 105 ---PIESHPFTLNPTHS--LLPPNNND----NNSNSHLPFVSGFDLGGEAAGFIQ----P 151
S F+L+P+ L NNN N +S PF + F+ G E+ GF+ P
Sbjct: 90 SSSCSPSQAFSLDPSQQNQFLSTNNNKGCLLNVPSSANPFDNAFEFGSES-GFLNQIHAP 148
Query: 152 AS-GFMGLTT---------------------------TQICA--TNDSDFHGFGSSYSNC 181
S GF LT T +C T + GFGS +
Sbjct: 149 ISMGFGSLTQLGNRDLSSVPDFLSARSLLAPESNNNNTMLCGGFTAPLELEGFGSPANGG 208
Query: 182 FDNLEGLFFNSNSKAKVC--------SQSQPTLFEKRAALRQSSG-KLENLEILGGNLLL 232
F ++AKV S +QPTLF+KRAA+RQSSG K+ N E G
Sbjct: 209 F---------VGNRAKVLKPLEVLASSGAQPTLFQKRAAMRQSSGSKMGNSESSGMRRFS 259
Query: 233 ENIKCRKNEEASVDISSLNYESDEYNNNNNNNNASNDNNVNGKVDESVKNWNAGGSATVG 292
++ +E +++S LNYESDE N + GK ESV+ G
Sbjct: 260 DDGDM---DETGIEVSGLNYESDEINES-------------GKAAESVQ--------IGG 295
Query: 293 DNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQR 352
KGK+KG+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQR
Sbjct: 296 GGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQR 355
Query: 353 INDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEIS----RSPTGEAARVEVRI 408
INDLHNELESTP GSL S+S P+TPTP TL CRVKEE+ SP G+ ARVEVR+
Sbjct: 356 INDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRL 415
Query: 409 REGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDV 468
REGRAVNIHMFC RRPGLLL+TM+ALD+LGLD+QQAVISCFNGFALDVFRAEQC+EGQ++
Sbjct: 416 REGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEI 475
Query: 469 LPKQIKSVLLDTAGFHDVM 487
LP QIK+VL DTAG+ ++
Sbjct: 476 LPDQIKAVLFDTAGYAGMI 494
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 321 bits (823), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/293 (62%), Positives = 209/293 (71%), Gaps = 48/293 (16%)
Query: 200 SQSQPTLFEKRAALRQSSG-KLENLEILGGNLLLENIKCRKNEEAS---VDISSLNYESD 255
S SQPTLF+KRAA+RQSS K+ N E + + ++ R+ ++ S +DIS LNYESD
Sbjct: 193 SGSQPTLFQKRAAMRQSSSSKMCNSE--SSSEMRKSSYEREIDDTSTGIIDISGLNYESD 250
Query: 256 EYNNNNNNNNASNDNNVNGKVDESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKK 315
++N NNN +PAKNLMAERRRRKK
Sbjct: 251 DHNTNNNKGKKKG--------------------------------MPAKNLMAERRRRKK 278
Query: 316 LNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSI 375
LNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH ELESTP S +S+
Sbjct: 279 LNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTPPSS-----SSL 333
Query: 376 QPMTPTPPTLPCRVKEEISRS-----PTGEAARVEVRIREGRAVNIHMFCARRPGLLLST 430
P+TPTP TL RVKEE+ S P G+ RVEVR+REG+AVNIHMFC RRPGLLLST
Sbjct: 334 HPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGRRPGLLLST 393
Query: 431 MRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVLLDTAGF 483
MRALD+LGLD+QQAVISCFNGFALDVFRAEQC+E DVLP+QIK+VLLDTAG+
Sbjct: 394 MRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQIKAVLLDTAGY 446
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 121/208 (58%), Gaps = 19/208 (9%)
Query: 281 KNWNAG--GSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASI 338
K+++ G G T K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SI
Sbjct: 153 KSFSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSI 212
Query: 339 LGDAIDYLKELLQRINDLHNELESTPTGSLMQPST---SIQPMTPTPPTLPCRVKEEISR 395
LGDAIDY+KELL +IN L +E + + S ++ + P + K EI R
Sbjct: 213 LGDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDR 272
Query: 396 SPTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALD 455
E RV++ C+ +PGLLLST+ L++LGL+I+Q VISCF+ F+L
Sbjct: 273 R--DEDTRVDI------------CCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQ 318
Query: 456 VFRAEQCREGQDVLPKQIKSVLLDTAGF 483
+E + + + IK L AG+
Sbjct: 319 ASCSEGAEQRDFITSEDIKQALFRNAGY 346
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 128/218 (58%), Gaps = 25/218 (11%)
Query: 268 NDNNVNGKVDESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVV 327
N NN + ++ES K++ + G + K +G P+KNLMAERRRRK+LNDRL +LRS+V
Sbjct: 116 NTNNYSPLMEES-KSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIV 174
Query: 328 PKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPC 387
PKI+KMDR SILGDAIDY+KELL +IN L + + GS ST I
Sbjct: 175 PKITKMDRTSILGDAIDYMKELLDKINKLQEDEQE--LGSNSHLSTLI------------ 220
Query: 388 RVKEEISRSPTGEAARVEVRIREGRAVNIH--MFCARRPGLLLSTMRALDSLGLDIQQAV 445
E + R+ + + EV RE VN H + C +PGL++ST+ L++LGL+I+Q V
Sbjct: 221 -TNESMVRN----SLKFEVDQRE---VNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCV 272
Query: 446 ISCFNGFALDVFRAEQCREGQDVLPKQIKSVLLDTAGF 483
ISCF+ F+L E + V + K L+ AG+
Sbjct: 273 ISCFSDFSLQASCFEVGEQRYMVTSEATKQALIRNAGY 310
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 23/196 (11%)
Query: 303 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 362
AKNLMAERRRRKKLNDRLY LRS+VP+I+K+DRASILGDAI+Y+KEL +L +ELE
Sbjct: 313 AKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 363 T---------PTGSLMQPSTSIQPMTPTPPTLPCR-----VKEEISRSPTGEAA-----R 403
P G + T + T P L C VK+++ + + +
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVV---TGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQ 429
Query: 404 VEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCR 463
V+V +GR + + C +PG M ALDSLGL++ A + + +VF+ E+
Sbjct: 430 VDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEK-N 488
Query: 464 EGQDVLPKQIKSVLLD 479
+ + V + +++ LL+
Sbjct: 489 DNEMVQAEHVRNSLLE 504
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 7/178 (3%)
Query: 303 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH---NE 359
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 360 LESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTG--EAARVEVRIREGRAVNIH 417
LESTP SL + + P ++K+ S S T E ++V R + +
Sbjct: 114 LESTPKSSLSFSKDFDRDL--LVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVS 171
Query: 418 MFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKS 475
+ C +R ++ +SL L I + ++ F+G E E Q+VL +I++
Sbjct: 172 VTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIET 229
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 361
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 413 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKE 472
Query: 362 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIRE---GRAVNIHM 418
+ + + R KE S + A+ +E+ I G V I +
Sbjct: 473 -----EIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRV 527
Query: 419 FCARR--PGLLLSTMRALDSLGLDIQQAVISCFNGFAL 454
C ++ PG M AL L L++ A +S N +
Sbjct: 528 QCGKKDHPGARF--MEALKELDLEVNHASLSVVNDLMI 563
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 16/171 (9%)
Query: 274 GKVDESVKNWNAGGSATVGDNKGKRKGLP--AKNLMAERRRRKKLNDRLYMLRSVVPKIS 331
G+ DE N SAT +N G RK ++ L++ERRRR ++ D+LY LRS+VP I+
Sbjct: 99 GEEDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNIT 158
Query: 332 KMDRASILGDAIDYLKELLQRINDLHNE---LEST--PTGSLMQPSTSIQPMTPTPPTLP 386
KMD+ASI+GDA+ Y++EL + L ++ LE++ TG + + Q P P
Sbjct: 159 KMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINP 218
Query: 387 CRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSL 437
K+ I +++V E + + + C + G+ S ++L+SL
Sbjct: 219 PASKKII---------QMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESL 260
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 8/83 (9%)
Query: 285 AGGSATVGDNKGKRKGL--------PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRA 336
AG + V + + +++G P ++ AER+RR+KLN R Y LRSVVP ISKMD+A
Sbjct: 368 AGIVSVVDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKA 427
Query: 337 SILGDAIDYLKELLQRINDLHNE 359
S+LGDAI Y+KEL +++ + +E
Sbjct: 428 SLLGDAISYIKELQEKVKIMEDE 450
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 361
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 414 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKE 473
Query: 362 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEI---SRSPTGEAARVEVRIREGRAVNIHM 418
+ I M VK+ S V+V+I G I +
Sbjct: 474 --------ELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKII-GWDAMIRI 524
Query: 419 FCARR--PGLLLSTMRALDSLGLDIQQAVISCFNGFAL 454
C++R PG M AL L L++ A +S N +
Sbjct: 525 QCSKRNHPGAKF--MEALKELDLEVNHASLSVVNDLMI 560
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 35/150 (23%)
Query: 297 KRKGLPAKNL---MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 353
K K LP ++L +AERRRR+KLN++ LRS+VP ++KMD+ SILGD I Y+ L +R+
Sbjct: 353 KDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRV 412
Query: 354 NDL---HNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIRE 410
++L H+E + T + C+ K T E VEV I E
Sbjct: 413 HELENTHHEQQHKRTRT-------------------CKRK-------TSE--EVEVSIIE 444
Query: 411 GRAVNIHMFCARRPGLLLSTMRALDSLGLD 440
V + M C R GLLL ++ L LG++
Sbjct: 445 N-DVLLEMRCEYRDGLLLDILQVLHELGIE 473
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 303 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 362
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+IDY++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 363 TPTGSLMQ-----------PSTSIQPMTPTPPTLPCRVKE-----EISRSPTGEAARVEV 406
+ S + T +Q + + K+ + P E ++V
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPI-EVLEMKV 171
Query: 407 RIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
+ V + + C+++ ++ + L+SL L+I S F
Sbjct: 172 TWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTS 216
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 12/104 (11%)
Query: 267 SNDNNVNGKVDESVKNW-NAGGSATVGDNKGKRKGLPAKN--------LMAERRRRKKLN 317
+++NN +G E W +A G+ G+N+ +++G N + AER+RR+KLN
Sbjct: 390 ASENNSDG---EGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLN 446
Query: 318 DRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 361
R Y LRSVVP ISKMD+AS+LGDA+ Y+ EL ++ + E E
Sbjct: 447 QRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 361
P ++ AER RR+KLN R Y LR+VVP +SKMD+ S+L DA+ Y+ EL + ++ ELE
Sbjct: 341 PLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENV--ELE 398
Query: 362 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREG--RAVNIHMF 419
I P++ C+ +E+ S E ++EV+I E V +
Sbjct: 399 KHAIEIQFNELKEIAGQRNAIPSV-CKYEEKAS-----EMMKIEVKIMESDDAMVRVESR 452
Query: 420 CARRPGLLLSTMRALDSLGLDIQQAVISCFNGF---------ALDVFRAEQCRE 464
PG L M AL L L++ A IS N L +++ E+ R+
Sbjct: 453 KDHHPGARL--MNALMDLELEVNHASISVMNDLMIQQANVKMGLRIYKQEELRD 504
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 307 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTG 366
++E++RR+KLN+R LRS++P ISK+D+ SIL D I+YL++L +R+ +L + ES T
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADT- 466
Query: 367 SLMQPSTSIQPMTPTPP-------TLPCR-VKEEISRSPTGEAARVEV---------RIR 409
T I M P + C K + S GE ++ RI
Sbjct: 467 -----ETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRIS 521
Query: 410 E-GRAVNIHMFCARRPGLLLSTMRALDSLGLD 440
G V I + CA R G+LL M + L LD
Sbjct: 522 SLGNEVVIELRCAWREGILLEIMDVISDLNLD 553
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 297 KRKGLPA--KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
K K PA ++ AE++RR+KLN R Y LR++VPK+S+MD+AS+L DA+ Y++ L +I+
Sbjct: 240 KEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKID 299
Query: 355 DLHNELE 361
DL E++
Sbjct: 300 DLETEIK 306
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 309 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSL 368
E++RR+KLN+R LR ++P I+K+D+ SIL D I+YL+EL +R+ +L + EST T
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDT--- 502
Query: 369 MQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEV--------------------RI 408
+ ++ P R + + TG +V V RI
Sbjct: 503 -ETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEAEPADTGFTGLTDNLRI 561
Query: 409 RE-GRAVNIHMFCARRPGLLLSTMRALDSLGLD 440
G V I + CA R G+LL M + L LD
Sbjct: 562 GSFGNEVVIELRCAWREGVLLEIMDVISDLHLD 594
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 50/189 (26%)
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN------- 354
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++
Sbjct: 450 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKL 509
Query: 355 DLHNELE-----------STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAAR 403
+ N+LE S G + +SI+P+
Sbjct: 510 QIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPV----------------------GME 547
Query: 404 VEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALD-------- 455
+EV+I G I + ++R M AL L L++ A +S N +
Sbjct: 548 IEVKII-GWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGF 606
Query: 456 -VFRAEQCR 463
++ EQ R
Sbjct: 607 RIYTQEQLR 615
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 293 DNKGKRKGLP-----AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLK 347
D+K +K LP +KNL +ER+RR+++N +Y LR+VVPKI+K+++ I DA+DY+
Sbjct: 248 DSKANKKLLPTENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYIN 307
Query: 348 ELLQRINDLHNELE 361
ELL L +EL+
Sbjct: 308 ELLVEKQKLEDELK 321
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 359
++ AER+RR+KLN R Y LR+VVP ISKMD+AS+L DAI Y+ ++ ++I E
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 14/194 (7%)
Query: 291 VGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELL 350
V K + + + NL AERRRR+KL+ RL LRS VP ++ M +ASI+ DAI Y+ EL
Sbjct: 19 VTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQ 78
Query: 351 QRINDL----HNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEV 406
+ +L H E+ P Q I+P T + EE+ + E ++
Sbjct: 79 NNVKNLLETFHEMEEAPPEIDEEQTDPMIKPEVETSD-----LNEEMKKLGIEENVQL-C 132
Query: 407 RIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQ 466
+I E R + + +R G+ M + LG +I ++ NG A+ + + Q +E
Sbjct: 133 KIGE-RKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNG-AILISASVQTQELC 190
Query: 467 DVLPKQIKSVLLDT 480
DV +Q K LL+
Sbjct: 191 DV--EQTKDFLLEV 202
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 280 VKNWNAGGSA--TVGDNKGKRKGLPAK--NLMAERRRRKKLNDRLYMLRSVVPKISKMDR 335
+K AGG A + G G + + A ++M+ER+RR+KLN+ +L+S++P I ++++
Sbjct: 390 LKKVVAGGGAWESCGGATGAAQEMSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNK 449
Query: 336 ASILGDAIDYLKELLQRINDLHNELE------STPTGSLMQP------STSIQPMTPTPP 383
ASIL + I YLKEL +R+ +L + E T T + +P S + +
Sbjct: 450 ASILAETIAYLKELQRRVQELESSREPASRPSETTTRLITRPSRGNNESVRKEVCAGSKR 509
Query: 384 TLPCRVKEEISRSPT----GEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGL 439
P ++++ R P ++ V V + + + V + + C L+ A+ SL L
Sbjct: 510 KSPELGRDDVERPPVLTMDAGSSNVTVTVSD-KDVLLEVQCRWEELLMTRVFDAIKSLHL 568
Query: 440 DIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVLLDTAG 482
D+ S +GF RA+ G V+P I L G
Sbjct: 569 DVLSVQASAPDGFMGLKIRAQFAGSGA-VVPWMISEALRKAIG 610
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 283 WNAGGSATVGDNKGKRKGLPAKN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGD 341
W + G AT + G KN +M+ER+RR+KLN+ +L+S++P I ++++ASIL +
Sbjct: 396 WESCGGATGAAQE--MSGTGTKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAE 453
Query: 342 AIDYLKELLQRINDLHNELE------STPTGSLMQP------STSIQPMTPTPPTLPCRV 389
I YLKEL +R+ +L + E T T + +P S + + P
Sbjct: 454 TIAYLKELQRRVQELESSREPASRPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELG 513
Query: 390 KEEISRSP--TGEAARVEVRIR-EGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVI 446
++++ R P T +A V + + V + + C L+ A+ SL LD+
Sbjct: 514 RDDVERPPVLTMDAGTSNVTVTVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQA 573
Query: 447 SCFNGFALDVFRAEQCREGQDVLPKQIKSVLLDTAG 482
S +GF RA+ G V+P I L G
Sbjct: 574 SAPDGFMGLKIRAQFAGSGA-VVPWMISEALRKAIG 608
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 295 KGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
+G RK ++ ER RR NDR + L++++P +K+DRASI+G+AIDY+KELL+ I
Sbjct: 241 RGSRK---SRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIE 297
Query: 355 DLHNELESTPTGSL-------MQPSTSIQPMTPTPPTLPCRVKEEISRS----------- 396
+ +E G + + T+ + + E+ +S
Sbjct: 298 EFKMLVEKKRCGRFRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNNSLR 357
Query: 397 -----PTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
+ V+VRI + V I + ++ LL T + LD L LD+
Sbjct: 358 CSWLKRKSKVTEVDVRIIDDE-VTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGE 416
Query: 452 FALDVFRAEQCREGQDVLPKQIKSVLLDTA 481
+F + C EG V I L++
Sbjct: 417 HYSFLFNTKIC-EGSCVYASGIADTLMEVV 445
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 364
+++AER+RR+KL R L ++VP + KMD+AS+LGDA+ ++K L +R+ +L + +
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERR 212
Query: 365 TGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRP 424
S++ S + + ++ S E +EVR + V I + C ++
Sbjct: 213 LESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPE---IEVRFSD-EDVLIKILCEKQK 268
Query: 425 GLLLSTMRALDSLGLDIQQAVISCFNGFALDV 456
G L M ++ L + I + + F G LD+
Sbjct: 269 GHLAKIMAEIEKLHILITNSSVLNF-GPTLDI 299
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 13/100 (13%)
Query: 261 NNNNNASNDNNVNGKVDESVKNWNAGGSATVGDNKGKRK-GLPAKNLMAERRRRKKLNDR 319
N +N S D V K + V +N G+R+ L ++++AER+RR+KLN+R
Sbjct: 100 NFSNQVSMDQKVGSKRKDCV------------NNGGRREPHLLKEHVLAERKRRQKLNER 147
Query: 320 LYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 359
L L +++P + K D+A++L DAI +LK+L +R+ L E
Sbjct: 148 LIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEE 187
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 296 GKRKGLPAK-NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
G R + AK +++AER+RR+KL+++ L +++P + K D+ +IL DAI +K+L +++
Sbjct: 110 GTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLR 169
Query: 355 DLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAV 414
L E E+T M + P L C I +E +I + +
Sbjct: 170 TLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQA--LPEIEAKISQNDIL 227
Query: 415 NIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDV 456
I + C + G +++ + +++ L I+ +++ F LD+
Sbjct: 228 -IRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDI 268
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 364
+++AER+RR+KL R L +++P + KMD+AS+LGDAI ++K L + + + + +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKT 186
Query: 365 TGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRP 424
S++ S + + S + +EVR+ G+ V I + C ++
Sbjct: 187 MESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRV-SGKDVLIKILCEKQK 245
Query: 425 GLLLSTMRALDSLGLDI 441
G ++ M ++ LGL I
Sbjct: 246 GNVIKIMGEIEKLGLSI 262
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 253 ESDEYNNNNNNNNASNDNNVNGKVDESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRR 312
+ DE N + NNNA D+ G ++ S + G +GKRK P ER R
Sbjct: 177 QRDESNVGDENNNAQFDS---GIIEFSKEIRRKG--------RGKRKNKP---FTTERER 222
Query: 313 RKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTG 366
R LN+R L+ ++P SK DRASIL D IDY+ EL +R+++L +E G
Sbjct: 223 RCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLVERKRCG 276
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 31/175 (17%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELES 362
++ ER RRK++N+ L +LRS++P + + D+ASI+G AI++++EL Q + L ++
Sbjct: 199 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 258
Query: 363 T---PTGSLMQP------------STSIQPMTPTPPTLPCR----VKEEISRSPTGEAAR 403
TG M + QP+ T ++EE + + + A
Sbjct: 259 RILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSC-LAD 317
Query: 404 VEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDI--------QQAVISCFN 450
VEV++ G I + RRPG L+ T+ AL+ L L I +Q V+ FN
Sbjct: 318 VEVKLL-GFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFN 371
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 272 VNGKVDESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKIS 331
VN DE N + G + G KRK P ER RR DR L++++P +
Sbjct: 190 VNLMYDEENNNLDDGLNRK-GRGSKKRKIFPT-----ERERRVHFKDRFGDLKNLIPNPT 243
Query: 332 KMDRASILGDAIDYLKELLQRINDL 356
K DRASI+G+AIDY+KELL+ I++
Sbjct: 244 KNDRASIVGEAIDYIKELLRTIDEF 268
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 362
++ ER RRK++N+ L +LRS++P + D+ASI+G AI+Y+KEL + + +
Sbjct: 117 HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTR 176
Query: 363 T--PTGSLMQPSTSIQPMT-----PTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVN 415
T P G S+ + P T P T E S SP A +EV + E A N
Sbjct: 177 THDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSP----AEIEVTVAESHA-N 231
Query: 416 IHMFCARRPGLLLSTMRALDSLGLDI 441
I + ++P LL + +L SL L +
Sbjct: 232 IKIMTKKKPRQLLKLITSLQSLRLTL 257
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPKI--SKMDRASILGDAIDYLKELLQRINDLHNEL-- 360
++ ER RRK++N+ L +LRS++P + D+ASI+G AI+YLKEL + + +
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKT 186
Query: 361 --ESTPTGSLMQPSTSIQPMTPTPP--TLPCRVKEEISRSPTGEAARVEVRIREGRAVNI 416
E T G +TS P P S + A +EV + E A ++
Sbjct: 187 ATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVESHA-SL 245
Query: 417 HMFCARRPGLLLSTMRALDSLGLDI 441
+ +RP LL + ++ SL L +
Sbjct: 246 KILAKKRPRQLLKLVSSIQSLRLTL 270
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 279 SVKNWNAGGSATVGDNKGKRKGLPAKNLM-AERRRRKKLNDRLYMLRSVVPKISKMDRAS 337
S K ++ G S T +K + K + AK AERRRR ++N + LR+++P + K D+AS
Sbjct: 69 SSKLFSRGFSVTKPKSKTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKAS 128
Query: 338 ILGDAIDYLKELLQRINDL 356
+LG+ + Y EL + + D+
Sbjct: 129 VLGETVRYFNELKKMVQDI 147
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 285 AGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAID 344
AGG ++V KR A + +ER+RR K+N R+ L+ +VP SK D+AS+L + I+
Sbjct: 201 AGGKSSVST---KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIE 257
Query: 345 YLKELLQRIN 354
YLK+L +++
Sbjct: 258 YLKQLQAQVS 267
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 201 QSQPTLFEKRA-ALRQSSGKLENLEILGGN-------LLLENIKCRKNEEA--SVDISSL 250
QS P +F+ R + S K+ N + L+ CRK++E+ +V SS+
Sbjct: 226 QSPPNVFQTRVLGAKDSEDKVLNESVASATPKDNQKACLISEDSCRKDQESEKAVVCSSV 285
Query: 251 NY--------ESDEYNNNNNNNNASN-DNNVNGKVDESVKNWNAGGSATVGDNKGKRKGL 301
ES + ++N + D + +ES G + G + +
Sbjct: 286 GSGNSLDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSA 345
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 361
NL +ERRRR ++N+++ L+ ++P +K+D+AS+L +AI+YLK L L ++
Sbjct: 346 EVHNL-SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL-----QLQVQIM 399
Query: 362 STPTGSLMQPSTSIQP 377
S +G + P+ P
Sbjct: 400 SMASGYYLPPAVMFPP 415
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 286 GGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDY 345
G G KR + +AERRRR+K+N+R+ L+ ++P+ +K + S+L D I+Y
Sbjct: 136 GTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEY 195
Query: 346 LKELLQRINDL 356
+K L +IN
Sbjct: 196 VKSLEMQINQF 206
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 292 GDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ 351
G KR + +AERRRR+K+N+++ L+ ++P+ +K + S L DAI+Y+K L
Sbjct: 247 GSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQS 306
Query: 352 RINDLHNEL 360
+I + + +
Sbjct: 307 QIQGMMSPM 315
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 275 KVDESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMD 334
K E N G KR + ++ERRRR+K+N+ + L+ ++P+ +K D
Sbjct: 252 KTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTD 311
Query: 335 RASILGDAIDYLKELLQRIN 354
R+S+L D I+Y+K L +I
Sbjct: 312 RSSMLDDVIEYVKSLQSQIQ 331
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 276 VDESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 335
DE+ A V KR + ++ER+RR ++N+R+ L+ ++P+ +K D+
Sbjct: 260 TDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDK 319
Query: 336 ASILGDAIDYLKELLQRI 353
AS+L +AI+Y+K L +I
Sbjct: 320 ASMLDEAIEYMKSLQLQI 337
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 294 NKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQ 351
NK + + ++ ER RR+++N+ L LRS++P + + D+ASI+G AID++KEL Q
Sbjct: 106 NKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQ 165
Query: 352 RINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEE-----------ISRSPTGE 400
+ L E E G+ P T+ + +L C +R G+
Sbjct: 166 LLQSL--EAEKRKDGTDETPKTA---SCSSSSSLACTNSSISSVSTTSENGFTARFGGGD 220
Query: 401 AARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVF 457
VE + + V++ + C R +L + +++ L L I IS F + F
Sbjct: 221 TTEVEATVIQNH-VSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSF 276
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 362
++ ER RR+++N L LRS++P I + D+ASI+G AID++K L Q++ L + S
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRS 254
Query: 363 TPT---GSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMF 419
+ + S++ ++ L KEE S EA +E VN+ +
Sbjct: 255 QQSDDNKEQIPEDNSLRNISSN--KLRASNKEEQSSKLKIEATVIESH------VNLKIQ 306
Query: 420 CARRPGLLLSTMRALDSLGLDI 441
C R+ G LL ++ L+ L +
Sbjct: 307 CTRKQGQLLRSIILLEKLRFTV 328
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 307 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL--HNELESTP 364
++E+RRR ++N+++ L+S++P +K D+AS+L +AI+YLK+L ++ L N + P
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINLHP 263
Query: 365 TGSLMQPSTSIQPM 378
L P T++ P+
Sbjct: 264 ---LCLPGTTLHPL 274
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 286 GGSATVGDNKG---KRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 342
GG+ D G K + L + +AE+RRR ++N L LR +VP K+D+A++L
Sbjct: 45 GGNFPADDCVGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATV 104
Query: 343 IDYLKELLQRIND--LHNELESTPTGSLMQPST 373
I+ +KEL Q+ + + +L + +QP T
Sbjct: 105 IEQVKELKQKAAESPIFQDLPTEADEVTVQPET 137
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 38/50 (76%)
Query: 307 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 356
++E++RR K+N+++ L+ ++P +K D+AS+L +AI+YLK+L ++ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 291 VGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKE 348
V N+ + + ++ ER RR+++N L +LRS++P+ K D+ASI+G AID++KE
Sbjct: 76 VCKNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKE 135
Query: 349 LLQRINDL 356
L ++ L
Sbjct: 136 LEHKLLSL 143
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 24/172 (13%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDL------ 356
++ ER RR+++N+ L LRS+ P I + D+ASI+G I+++KEL Q + L
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 357 -----------HNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVE 405
H +E + G+ +T+ P + + +E+ A VE
Sbjct: 63 KTLNRPSFPYDHQTIEPSSLGA----ATTRVPFSRIENVMTTSTFKEVGACCNSPHANVE 118
Query: 406 VRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVF 457
+I G V + + R G L+ + L+ L + IS L F
Sbjct: 119 AKI-SGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFF 169
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 276 VDESVKNWNAGGS---------ATVGDNKGKRKGLPA-----KNLMAERRRRKKLNDRLY 321
VDES NW G S A+V KGK + ++L A R+RR+K+N+RL
Sbjct: 136 VDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYA-RKRREKINERLK 194
Query: 322 MLRSVVPKISKMDRASILGDAIDYLKELLQRI 353
L+++VP +K+D +++L +A+ Y+K L +I
Sbjct: 195 TLQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 226
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 276 VDESVKNWNAGGSATVGDNKGKRKGLPAK-NLMAERRRRKKLNDRLYMLRSVVPKISKMD 334
DESV +A G+ + + R+ A+ + ++ERRRR ++N+R+ L+ ++P SK D
Sbjct: 232 TDESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTD 291
Query: 335 RASILGDAIDYLKEL 349
+ASIL +AIDYLK L
Sbjct: 292 KASILDEAIDYLKSL 306
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLH 357
++ ER RRK++N+ L +LRS++P + + D+ASI+G ++Y+ EL Q + L
Sbjct: 104 HVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLE 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,711,208
Number of Sequences: 539616
Number of extensions: 8185302
Number of successful extensions: 105180
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 357
Number of HSP's that attempted gapping in prelim test: 31624
Number of HSP's gapped (non-prelim): 29322
length of query: 487
length of database: 191,569,459
effective HSP length: 121
effective length of query: 366
effective length of database: 126,275,923
effective search space: 46216987818
effective search space used: 46216987818
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)