Citrus Sinensis ID: 011399
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 487 | 2.2.26 [Sep-21-2011] | |||||||
| Q9MA15 | 711 | Uncharacterized aarF doma | yes | no | 0.946 | 0.648 | 0.867 | 0.0 | |
| Q55680 | 681 | Uncharacterized protein s | N/A | no | 0.926 | 0.662 | 0.528 | 1e-141 | |
| P73121 | 566 | Uncharacterized protein s | N/A | no | 0.934 | 0.803 | 0.457 | 1e-122 | |
| Q94BU1 | 692 | Uncharacterized aarF doma | no | no | 0.891 | 0.627 | 0.455 | 1e-114 | |
| Q8RWG1 | 682 | Uncharacterized aarF doma | no | no | 0.928 | 0.662 | 0.401 | 1e-98 | |
| P73627 | 585 | Uncharacterized protein s | N/A | no | 0.802 | 0.668 | 0.362 | 4e-72 | |
| Q55884 | 567 | Uncharacterized protein s | N/A | no | 0.815 | 0.700 | 0.349 | 3e-70 | |
| Q9K0N0 | 503 | Probable ubiquinone biosy | yes | no | 0.774 | 0.749 | 0.298 | 2e-52 | |
| Q7NZD1 | 508 | Probable ubiquinone biosy | yes | no | 0.751 | 0.720 | 0.304 | 3e-51 | |
| Q9JVQ5 | 503 | Probable ubiquinone biosy | yes | no | 0.774 | 0.749 | 0.295 | 6e-51 |
| >sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/461 (86%), Positives = 436/461 (94%)
Query: 1 MARAVNASVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKR 60
+ RA++AS+YSPEL+AR +GS+P + LRR+L+IL ALG F+LKL IDQ+ G L++N +KR
Sbjct: 87 LGRAIDASIYSPELIARKHGSQPFKALRRSLEILGALGGFALKLGIDQKQGNLEKNMKKR 146
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A ELRRIFTRLGPTFVKLGQGLSTRPD+CPP+YLEEL+ELQDALPTFPDAEAF+CIEREL
Sbjct: 147 AIELRRIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIEREL 206
Query: 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
L+L++IFSS+SP PIAAASLGQVYKAQL+YSGQ+VAVKVQRPGIEEAIGLDFYLIRGVG
Sbjct: 207 DLSLETIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIRGVG 266
Query: 181 FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY 240
LINKYVD ITTDV+ LIDEFA RVYQELNYVQE QNARRFKKLYADK DVLVPDIFWDY
Sbjct: 267 KLINKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDY 326
Query: 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLL 300
TS KVLTMEWVEG KLNEQ+AIESQGLKVLDLVNTGIQCSLRQLLEYG+FHADPHPGNLL
Sbjct: 327 TSRKVLTMEWVEGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLL 386
Query: 301 ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360
ATP+GKLAFLDFGMMSETPEEARFAIIGHVVH+VNRDYEAMARDYYAL FLSPDVDVTPI
Sbjct: 387 ATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDVTPI 446
Query: 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYA 420
+PALR+FFDDALN +VSELNFKT+VDGLGAV YQYPFNVP YYALILRSLTVLEGLALYA
Sbjct: 447 IPALRDFFDDALNYTVSELNFKTLVDGLGAVFYQYPFNVPPYYALILRSLTVLEGLALYA 506
Query: 421 DPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
DPNFKVLAASYPYFAKRLLTDPNPYLRDAL+ELLFKDG+FR
Sbjct: 507 DPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGKFR 547
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: -EC: .EC: - |
| >sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/452 (52%), Positives = 323/452 (71%), Gaps = 1/452 (0%)
Query: 10 YSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRIFT 69
Y P+L+ Y RP+Q+L R + IL L F L + ++ G R +A +LR + T
Sbjct: 53 YHPDLIMEFYRKRPLQVLGRLINILFPLLRFILGIWWEKLRGKDPTVSRAKAIQLRELLT 112
Query: 70 RLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFS 129
LGPT++K+GQ LSTRPD+ PP +L+EL+ LQD LP+FP+ A+ IE ELG + I++
Sbjct: 113 NLGPTYIKVGQALSTRPDLVPPVFLDELTTLQDQLPSFPNEVAYRFIEEELGAPAEEIYA 172
Query: 130 SISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI 189
+SP PIAAASLGQVYK +LK +G+ VAVKVQRP + I LD Y++R + + V
Sbjct: 173 ELSPEPIAAASLGQVYKGKLK-TGEAVAVKVQRPDLVRRITLDIYIMRSLSLWARRSVKR 231
Query: 190 ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTME 249
+ +D+VA+ DE ASRV++E+NY QE N +F +LY ++ VP I+W YT +VLTME
Sbjct: 232 LRSDLVAITDELASRVFEEMNYYQEAINGEKFAQLYGSLPEIYVPSIYWQYTGRRVLTME 291
Query: 250 WVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAF 309
WVEG+KL AI++QG+ LV G+QCSLRQLLE+G+FHADPHPGNLLA +G+LA+
Sbjct: 292 WVEGIKLTNIKAIQAQGIDATHLVEVGVQCSLRQLLEHGFFHADPHPGNLLAMADGRLAY 351
Query: 310 LDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369
LDFGMMS R+ +I VVH+VNRD++++A+DY LDFL PD D+ PI+PAL F
Sbjct: 352 LDFGMMSTIQPYQRYGLIEAVVHLVNRDFDSLAKDYVKLDFLKPDTDLKPIIPALGQVFG 411
Query: 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA 429
+AL +SV+ELNFK+I D + A++Y++PF VPAYYALI+RS+ LEG+A+ DPNFKVL+
Sbjct: 412 NALGASVAELNFKSITDQMSAMMYEFPFRVPAYYALIIRSMVTLEGIAIGIDPNFKVLSK 471
Query: 430 SYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
+YPY AKRLLTD + LR +L ELLFK+G FR
Sbjct: 472 AYPYIAKRLLTDQSEELRTSLKELLFKEGSFR 503
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Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|P73121|Y1919_SYNY3 Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1919 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/457 (45%), Positives = 310/457 (67%), Gaps = 2/457 (0%)
Query: 6 NASVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELR 65
N Y+ + +A Y RP ++L R L+++ + G F LL DQ G ++ KR+RA +LR
Sbjct: 15 NIRRYNAQAIANYYRRRPWKVLWRALEVVWSFGFFLTCLLWDQWTGQVEYYKRQRAEDLR 74
Query: 66 RIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLD 125
+ T+LGPTF+K+GQ LSTRPD+ ++LEEL +LQD LP F + AF +E +LG+ +D
Sbjct: 75 ELLTKLGPTFIKVGQALSTRPDLVRRDFLEELIKLQDQLPPFDNDLAFQLMEEQLGMKVD 134
Query: 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINK 185
+ IS P+AAASLGQVY+A L +SG+ VAVKVQRP + + LD YL+R +
Sbjct: 135 EAYREISAHPVAAASLGQVYRAML-FSGEEVAVKVQRPNLRPRLSLDLYLMRLGAQKFGR 193
Query: 186 YVDI-ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGK 244
++ + + D+ ++DEF ++++E++Y+ EG+NA +F + + +V VP I+W Y++ K
Sbjct: 194 FLPLNLGHDLTLIVDEFGIKLFEEIDYLNEGRNAEKFAENFHGDAEVKVPCIYWQYSNQK 253
Query: 245 VLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE 304
VLT+EW++G KL + I + GL D++ G+ LRQLLE+G+FHADPHPGNL AT +
Sbjct: 254 VLTLEWIQGFKLTDTDKIRAAGLDPSDIIRIGVTSGLRQLLEHGFFHADPHPGNLFATLD 313
Query: 305 GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364
G++A++DFGMM + + I +V ++N+DY A+ D+ AL FL+P+ D+TPI+PAL
Sbjct: 314 GRMAYIDFGMMDQLEPGTKETIASSIVQLINKDYLALTEDFIALGFLAPNTDITPIIPAL 373
Query: 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNF 424
N F A+ SV + NFKTI D ++Y YPF VPA +ALI+RSL EGLAL DPNF
Sbjct: 374 ENVFGSAIGQSVQDFNFKTITDDFSELMYDYPFRVPAKFALIIRSLVTQEGLALSLDPNF 433
Query: 425 KVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
K++ +YPY A+RLLT +P LR L+++LFK+G+F+
Sbjct: 434 KIVEVAYPYVARRLLTGESPQLRRQLIDVLFKNGKFQ 470
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Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 298/443 (67%), Gaps = 9/443 (2%)
Query: 19 YGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRIFTRLGPTFVKL 78
Y +P+ LLRR QI + L D+ DQ + RAAELR++ LGP +VK+
Sbjct: 78 YKKKPLILLRRLAQIGTTFSYWFGLRLADEALERSDQMFKVRAAELRKLLVELGPAYVKI 137
Query: 79 GQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAA 138
Q +S+RPD+ PP YL+ELS LQD + F AF+ IE ELGL +D +FS ISP P+AA
Sbjct: 138 AQAVSSRPDLIPPIYLDELSLLQDQITPFSTEVAFNMIEDELGLPIDELFSEISPEPVAA 197
Query: 139 ASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALI 198
ASLGQVY+A+L+ SG++VAVKVQRPG+ AI LD ++R + LI K +D+ A++
Sbjct: 198 ASLGQVYQARLRRSGKVVAVKVQRPGVRAAIALDTLILRYIAGLIKK-AGRFNSDLEAVV 256
Query: 199 DEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
DE+A+ +++E++Y+ E QN +F+KLY +DVLVP ++ +Y++ KVL MEWVEG KLNE
Sbjct: 257 DEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLVPKMYTEYSTSKVLVMEWVEGQKLNE 316
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
+ L LV G+ CS QLLEYG++HADPHPGN L T +G+LA+LDFGMM +
Sbjct: 317 --------VNDLYLVEVGVYCSFNQLLEYGFYHADPHPGNFLRTYDGQLAYLDFGMMGDF 368
Query: 319 PEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSE 378
E R + +H+VNRD++A+A+D+ L L P + + + AL + F DA++ V
Sbjct: 369 RPELRDGFMEACLHLVNRDFKALAKDFVTLGLLPPTAEKSAVTKALTDVFQDAISRGVRN 428
Query: 379 LNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438
++F ++ LG +Y++ F +P Y++L++RSL VLEG+A+ PN+KVL ++YP+ A+++
Sbjct: 429 ISFGDLLGDLGKTMYRFKFRIPPYFSLVIRSLAVLEGIAIGISPNYKVLGSTYPWIARKI 488
Query: 439 LTDPNPYLRDALVELLFKDGRFR 461
LTD +P L+ +L LL+++G FR
Sbjct: 489 LTDSSPQLKSSLQNLLYEEGVFR 511
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: - EC: . EC: - |
| >sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 360 bits (924), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 183/456 (40%), Positives = 283/456 (62%), Gaps = 4/456 (0%)
Query: 10 YSPELL-ARNYGSRP--VQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRR 66
YSPE + ++ SR V L+ R ++I+ LG + L D G ++ RA +LR
Sbjct: 113 YSPETVRSKVLESRGAVVSLVSRGVEIVWTLGLYWSTLTYDFLVGRDEEVVPFRARQLRN 172
Query: 67 IFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDS 126
+ LGP+F+K GQ L+ RPDI +Y+ EL LQD +P FP+ AF+ IE ELG L++
Sbjct: 173 LLCNLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNEVAFNIIEEELGQPLEN 232
Query: 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKY 186
IFS IS IAAASLGQVY+A L+ +G+ VA+KVQRP IE I D +L R + +N +
Sbjct: 233 IFSKISSQTIAAASLGQVYRATLRATGEDVAIKVQRPQIEPIIYRDLFLFRTLASFLNGF 292
Query: 187 -VDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKV 245
+ + + ++DEF ++ +EL+Y E +N F + + D V +P ++ + +V
Sbjct: 293 SLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPGVYKNLCGPRV 352
Query: 246 LTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG 305
L MEW++G++ + AI+ G+ + + G+ +LRQLLE+G FH DPHPGN+ A +G
Sbjct: 353 LVMEWIDGIRCTDPQAIKDAGIDLNGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMQDG 412
Query: 306 KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365
++A++DFG ++ ++ + +I VVH VN DY MA D+ L FL+ D DV+PIVPAL
Sbjct: 413 RIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEMANDFTRLGFLAKDTDVSPIVPALE 472
Query: 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFK 425
+ ++ +++ NF+++ ++Y +P +P ++L++RSL EG+ P+FK
Sbjct: 473 AIWQNSAGKGLADFNFRSVTGQFNKLVYDFPIRIPERFSLVIRSLLTQEGICFTLKPDFK 532
Query: 426 VLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
L +YPY AKRLLTDPNP LR+ L+++LFKDG F+
Sbjct: 533 FLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGVFQ 568
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: - EC: . EC: - |
| >sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 236/395 (59%), Gaps = 4/395 (1%)
Query: 53 LDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEA 112
L Q +R++A +R LGPTF+K+GQ STR D+ P EY+EELS+LQD +P F +A
Sbjct: 77 LQQRRRRQAKWIRENLLSLGPTFIKVGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQA 136
Query: 113 FSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLD 172
IE ELG + ++ S P P+AAASLGQV+KAQL ++G+ V VKVQRPG+++ +D
Sbjct: 137 AGIIEEELGKPIAKLYRSFDPVPLAAASLGQVHKAQL-HTGEDVVVKVQRPGLKKLFTID 195
Query: 173 FYLIRGVG-FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDV 231
+++ + + N D + +E ++QE +Y++EG++A F++ + ++ V
Sbjct: 196 LAILKKIAQYFQNHPKWGRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRGEDWV 255
Query: 232 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291
VP ++W YTS ++LT+E++ G+K++ A+E+ GL+ +L G + L QLL +G+FH
Sbjct: 256 KVPRVYWRYTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFH 315
Query: 292 ADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF 350
ADPHPGNL +PE G+L F DFGMM E + + ++ + + ++ E + AL
Sbjct: 316 ADPHPGNLAVSPEAGELIFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVALGA 375
Query: 351 LSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410
L D+ PI +++ D+ ++ E + I D L + Y PF PA + ++R+
Sbjct: 376 LKETEDMGPIRRSVQFLLDNFMDKPFEEQSITKISDDLYEIAYDQPFRFPATFTFVMRAF 435
Query: 411 TVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445
+ LEG+ DP+F +A + P FA +++ + N +
Sbjct: 436 STLEGVGKGLDPDFNFMAVAQP-FALQIMNNSNGF 469
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0095 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 266 bits (679), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 235/403 (58%), Gaps = 6/403 (1%)
Query: 55 QNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFS 114
Q + +RA L + LGPTF+K+GQ LSTR DI P EY+E ++LQD +P F +A +
Sbjct: 52 QRRYRRAQWLVQQLLYLGPTFIKIGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQAIA 111
Query: 115 CIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFY 174
IE+EL +D IF +P+A+ASLGQV++A L +G+ V VKVQRPG++ + LDF
Sbjct: 112 VIEQELHGAIDEIFQQFEVTPLASASLGQVHRAVLP-TGEAVVVKVQRPGLDSLLNLDFE 170
Query: 175 LIRGVGFLINKYVDIITT-----DVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKE 229
L+ L +++ ++ A+ EF S ++ E++Y+ EG+NA RF++ +AD
Sbjct: 171 LLHQTLRLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFADYP 230
Query: 230 DVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGY 289
V VP+I+W YT+ VLT+E++ G+K++++ A+E+ G+ + ++ TGI L+QLL G+
Sbjct: 231 RVRVPEIYWQYTTRMVLTLEYLPGIKVDDRQALETAGINLDLVIQTGICAYLKQLLVDGF 290
Query: 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349
F +DPHPGN+ +G L F DFG M+E A+ ++ ++ +D + +
Sbjct: 291 FQSDPHPGNMAVDSQGDLIFYDFGTMAEVKIIAKDQMVQTFFAVLRKDTNQVLEALIYMG 350
Query: 350 FLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRS 409
+ P D++PI + D+ + + F + + + A+ Q PF +P IL+S
Sbjct: 351 LVEPKGDLSPIKRIINFLLDNFRDKPIDIKAFDQVGEEVYAMFQQQPFRLPPQMTFILKS 410
Query: 410 LTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452
++ L+G+A DP + ++AAS P+ + P L AL++
Sbjct: 411 ISTLDGIARALDPRYNLIAASQPFIQSITVAQPKRSLAMALLQ 453
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|Q9K0N0|UBIB_NEIMB Probable ubiquinone biosynthesis protein UbiB OS=Neisseria meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 206/379 (54%), Gaps = 2/379 (0%)
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A LR LGP F+K GQ LSTRPD+ P +Y EL++LQD +P F + IE+ L
Sbjct: 51 AVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSL 110
Query: 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIR-GV 179
G +++ +++ PIA+AS+ QV+KA+L +SG+ VAVKV RP + I D L+R G
Sbjct: 111 GQSIEKLYAEFETEPIASASIAQVHKARL-HSGEQVAVKVLRPNLLPVIEQDLSLMRFGA 169
Query: 180 GFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD 239
G++ + D ++ EF ++ EL+ ++E NA + + + + + ++VP +F+D
Sbjct: 170 GWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYD 229
Query: 240 YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNL 299
Y + VLT+EW++G +++ +++ G+ + L + G++ Q+ G+FHAD HPGN+
Sbjct: 230 YCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNI 289
Query: 300 LATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359
L + + LDFG++ + + + + + NRDY +A + ++ D
Sbjct: 290 LVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGWVPADTRAEE 349
Query: 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALY 419
+ A+R + N +S+++F ++ L V ++ + L+ ++L +EGL
Sbjct: 350 LEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEGLGRQ 409
Query: 420 ADPNFKVLAASYPYFAKRL 438
DP+ + + P+ K +
Sbjct: 410 LDPDLDLWKTAKPFLVKWM 428
|
Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis. Neisseria meningitidis serogroup B (strain MC58) (taxid: 122586) |
| >sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 194/371 (52%), Gaps = 5/371 (1%)
Query: 71 LGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSS 130
LGP FVK GQ LSTR D+ PPEY +EL+ LQD +P F A +ER LG ++ +F
Sbjct: 59 LGPIFVKFGQVLSTRRDLLPPEYADELALLQDRVPPFDGDIARQVVERSLGRKVEELFVD 118
Query: 131 ISPSPIAAASLGQVYKAQLKY----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINK- 185
P+A+AS+ QV+KA L+ G+ VAVKV RPGI I D L+R + + K
Sbjct: 119 FDLKPVASASVAQVHKAWLRQPDGGRGREVAVKVLRPGILPVIEQDLSLMRTLAGWVEKL 178
Query: 186 YVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKV 245
+ D ++ EF ++ EL+ + E NA + ++ + + ++VP++F+DY+S +V
Sbjct: 179 FADGKRLKPREVVAEFDKYLHDELDMMHEAANASQLRRNFKGSDMLIVPEVFYDYSSREV 238
Query: 246 LTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG 305
LT+EW+ G+ + + + G+ + L G++ Q+ +G+FHAD HPGN+ +G
Sbjct: 239 LTLEWMHGIPVGQIERLREAGVDLQKLSRFGVEIFFTQVFRHGFFHADMHPGNIFVAADG 298
Query: 306 KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365
+ LDFG++ + + + + + NRDY +A + ++ D + A+R
Sbjct: 299 RYIALDFGIVGSLTDTDKHYLAVNFLAFFNRDYHRVATAHIESGWVPRDTRAEELEAAVR 358
Query: 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFK 425
+ +SE++F ++ L ++ + L+ ++L +EGL DP
Sbjct: 359 TVCEPIFEKPLSEISFGMVLLRLFETSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPELD 418
Query: 426 VLAASYPYFAK 436
+ + P+ K
Sbjct: 419 LWDTAKPFLTK 429
|
Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis. Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) (taxid: 243365) |
| >sp|Q9JVQ5|UBIB_NEIMA Probable ubiquinone biosynthesis protein UbiB OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=ubiB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (513), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 204/379 (53%), Gaps = 2/379 (0%)
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A LR LGP F+K GQ LSTRPD+ P +Y EL++LQD +P F + IE+ L
Sbjct: 51 AVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSL 110
Query: 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIR-GV 179
G +++ +++ PIA+AS+ QV+KA+L +SG+ VAVKV RP + I D L+R G
Sbjct: 111 GQSIEKLYAEFETEPIASASIAQVHKARL-HSGERVAVKVLRPNLLPLIEQDLSLMRFGA 169
Query: 180 GFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD 239
++ + D + ++ EF ++ EL+ ++E NA + + + + ++VP +F+D
Sbjct: 170 AWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFHNSNMLIVPKVFYD 229
Query: 240 YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNL 299
Y + VLT+EW++G + + +++ G+ + L + G++ Q+ G+FHAD HPGN+
Sbjct: 230 YCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNI 289
Query: 300 LATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359
L + + LDFG++ + + + + + NRDY +A + ++ D
Sbjct: 290 LVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGWVPADTRAEE 349
Query: 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALY 419
+ A+R + N +S+++F ++ L V ++ + L+ ++L +EGL
Sbjct: 350 LEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEGLGRQ 409
Query: 420 ADPNFKVLAASYPYFAKRL 438
DP+ + + P+ K +
Sbjct: 410 LDPDLDLWKTAKPFLVKWM 428
|
Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis. Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) (taxid: 122587) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 487 | ||||||
| 224065603 | 704 | predicted protein [Populus trichocarpa] | 0.946 | 0.654 | 0.917 | 0.0 | |
| 297842751 | 707 | ABC1 family protein [Arabidopsis lyrata | 0.946 | 0.652 | 0.874 | 0.0 | |
| 356495915 | 698 | PREDICTED: uncharacterized aarF domain-c | 0.932 | 0.650 | 0.881 | 0.0 | |
| 18412437 | 711 | aarF domain-containing kinase [Arabidops | 0.946 | 0.648 | 0.867 | 0.0 | |
| 449435585 | 706 | PREDICTED: uncharacterized aarF domain-c | 0.928 | 0.640 | 0.889 | 0.0 | |
| 357469819 | 713 | aarF domain-containing protein kinase, p | 0.946 | 0.646 | 0.867 | 0.0 | |
| 225464716 | 721 | PREDICTED: uncharacterized aarF domain-c | 0.932 | 0.629 | 0.898 | 0.0 | |
| 296087563 | 632 | unnamed protein product [Vitis vinifera] | 0.932 | 0.718 | 0.898 | 0.0 | |
| 255565769 | 528 | Ubiquinone biosynthesis protein coq-8, p | 0.940 | 0.867 | 0.897 | 0.0 | |
| 242090083 | 713 | hypothetical protein SORBIDRAFT_09g01124 | 0.946 | 0.646 | 0.835 | 0.0 |
| >gi|224065603|ref|XP_002301879.1| predicted protein [Populus trichocarpa] gi|222843605|gb|EEE81152.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/461 (91%), Positives = 442/461 (95%)
Query: 1 MARAVNASVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKR 60
MARAVNASVYSPE+LA YGSRP+++LRRTL+IL LGSF LKLL+D+RNGV DQ K R
Sbjct: 80 MARAVNASVYSPEVLAVQYGSRPIKVLRRTLEILTGLGSFGLKLLLDKRNGVFDQKKGIR 139
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEEL+ELQDALPTFPDAEAFSCIEREL
Sbjct: 140 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELAELQDALPTFPDAEAFSCIEREL 199
Query: 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
GL LDSIFSSISPSPIAAASLGQVYKAQL YSGQ VAVKVQRPGIEEAIGLDFYLIRG+G
Sbjct: 200 GLPLDSIFSSISPSPIAAASLGQVYKAQLTYSGQTVAVKVQRPGIEEAIGLDFYLIRGLG 259
Query: 181 FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY 240
F INKYVDIIT+DVVALIDEFA RVYQELNYVQEGQNARRFKKLYAD+ED+LVPDIFWDY
Sbjct: 260 FFINKYVDIITSDVVALIDEFARRVYQELNYVQEGQNARRFKKLYADREDILVPDIFWDY 319
Query: 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLL 300
TSGKVLTM+WV+GVKLNEQ AIE QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLL
Sbjct: 320 TSGKVLTMDWVDGVKLNEQDAIERQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLL 379
Query: 301 ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360
ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS DVDV+PI
Sbjct: 380 ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSRDVDVSPI 439
Query: 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYA 420
VPALRNFFDDALN +VSELNFKT+V+GLGAV YQYPFNVPAYYALILRSLTVLEGLALYA
Sbjct: 440 VPALRNFFDDALNYTVSELNFKTLVNGLGAVFYQYPFNVPAYYALILRSLTVLEGLALYA 499
Query: 421 DPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
DPNFKVLAASYPYFAKRLLTDPNPYLRDAL+ELLFKDGRFR
Sbjct: 500 DPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGRFR 540
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842751|ref|XP_002889257.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297335098|gb|EFH65516.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/461 (87%), Positives = 437/461 (94%)
Query: 1 MARAVNASVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKR 60
+ RAV+AS+YSPEL+AR +GS+P + LRR+L+IL ALG F+LKL IDQ+ G L++N +KR
Sbjct: 83 LGRAVDASIYSPELIARKHGSQPFKALRRSLEILGALGGFALKLGIDQKQGNLEKNMKKR 142
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A ELRRIFTRLGPTFVKLGQGLSTRPD+CPP+YLEEL+ELQDALPTFPDAEAF+CIER+L
Sbjct: 143 AGELRRIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIERDL 202
Query: 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
L+L+SIFSS+SP PIAAASLGQVYKAQL+YSGQ+VAVKVQRPGIEEAIGLDFYLIRGVG
Sbjct: 203 DLSLESIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIRGVG 262
Query: 181 FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY 240
LINKYVD ITTDV+ LIDEFA RVYQELNYVQE QNARRFKKLYADK DVLVPDIFWDY
Sbjct: 263 KLINKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDY 322
Query: 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLL 300
TS KVLTMEWVEG KLNEQ+AIESQGLKVLDLVNTGIQCSLRQLLEYG+FHADPHPGNLL
Sbjct: 323 TSRKVLTMEWVEGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLL 382
Query: 301 ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360
ATP+GKLAFLDFGMMSETPEEARFAIIGHVVH+VNRDYEAMARDYYAL FLSPDVDVTPI
Sbjct: 383 ATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDVTPI 442
Query: 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYA 420
VPALR+FFDDALN +VSELNFKT+VDGLGAV YQYPFNVPAYYALILRSLTVLEGLALYA
Sbjct: 443 VPALRDFFDDALNYTVSELNFKTLVDGLGAVFYQYPFNVPAYYALILRSLTVLEGLALYA 502
Query: 421 DPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
DPNFKVLAASYPYFAKRLLTDPNPYLRDAL+ELLFKDG+FR
Sbjct: 503 DPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGKFR 543
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356495915|ref|XP_003516816.1| PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic-like isoform 1 [Glycine max] gi|356495917|ref|XP_003516817.1| PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/454 (88%), Positives = 433/454 (95%)
Query: 8 SVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRI 67
+VY+P+L+A YGS+P++++RRTLQIL ALGSF LKLL+DQRNG LD+N+R RA EL+ I
Sbjct: 84 TVYNPQLIASMYGSQPIKVVRRTLQILTALGSFGLKLLLDQRNGALDKNRRVRAVELKDI 143
Query: 68 FTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSI 127
FT+LGPTFVKLGQGLSTRPDICPPEYLEELSELQD LPTFPD EAF+CIERELGL+LDSI
Sbjct: 144 FTKLGPTFVKLGQGLSTRPDICPPEYLEELSELQDGLPTFPDEEAFACIERELGLSLDSI 203
Query: 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYV 187
FSSISPS +AAASLGQVYKAQLKYSG++VAVKVQRPGIEEAIGLDFYLIRG+G INKY+
Sbjct: 204 FSSISPSAVAAASLGQVYKAQLKYSGKLVAVKVQRPGIEEAIGLDFYLIRGLGIFINKYI 263
Query: 188 DIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLT 247
DIIT+DVVALIDEFA RV+QELNYVQEGQNARRFKKLYADKED+ VPD+FWDYTS KVLT
Sbjct: 264 DIITSDVVALIDEFARRVFQELNYVQEGQNARRFKKLYADKEDICVPDVFWDYTSAKVLT 323
Query: 248 MEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL 307
MEWVEGVKLNEQ AIE QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL
Sbjct: 324 MEWVEGVKLNEQEAIERQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL 383
Query: 308 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367
AFLDFGMMSETPEEAR AIIGHVVH+VNRDYEAMARDYYALDFLSPDVDV+PIVPALR+F
Sbjct: 384 AFLDFGMMSETPEEARSAIIGHVVHLVNRDYEAMARDYYALDFLSPDVDVSPIVPALRDF 443
Query: 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427
FDDALN +VSELNFKT+VDGLG VLYQ+PFNVPAYYALILRSLTVLEGLALYADPNFKVL
Sbjct: 444 FDDALNYTVSELNFKTLVDGLGNVLYQFPFNVPAYYALILRSLTVLEGLALYADPNFKVL 503
Query: 428 AASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
AASYPYFAKRLLTDPNPYLRDAL+ELLF+DGRFR
Sbjct: 504 AASYPYFAKRLLTDPNPYLRDALIELLFQDGRFR 537
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18412437|ref|NP_565214.1| aarF domain-containing kinase [Arabidopsis thaliana] gi|75191793|sp|Q9MA15.1|Y1960_ARATH RecName: Full=Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic; Flags: Precursor gi|7715610|gb|AAF68128.1|AC010793_23 F20B17.3 [Arabidopsis thaliana] gi|18086325|gb|AAL57626.1| At1g79600/F20B17_3 [Arabidopsis thaliana] gi|22655328|gb|AAM98256.1| At1g79600/F20B17_3 [Arabidopsis thaliana] gi|332198150|gb|AEE36271.1| aarF domain-containing kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/461 (86%), Positives = 436/461 (94%)
Query: 1 MARAVNASVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKR 60
+ RA++AS+YSPEL+AR +GS+P + LRR+L+IL ALG F+LKL IDQ+ G L++N +KR
Sbjct: 87 LGRAIDASIYSPELIARKHGSQPFKALRRSLEILGALGGFALKLGIDQKQGNLEKNMKKR 146
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A ELRRIFTRLGPTFVKLGQGLSTRPD+CPP+YLEEL+ELQDALPTFPDAEAF+CIEREL
Sbjct: 147 AIELRRIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIEREL 206
Query: 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
L+L++IFSS+SP PIAAASLGQVYKAQL+YSGQ+VAVKVQRPGIEEAIGLDFYLIRGVG
Sbjct: 207 DLSLETIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIRGVG 266
Query: 181 FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY 240
LINKYVD ITTDV+ LIDEFA RVYQELNYVQE QNARRFKKLYADK DVLVPDIFWDY
Sbjct: 267 KLINKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDY 326
Query: 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLL 300
TS KVLTMEWVEG KLNEQ+AIESQGLKVLDLVNTGIQCSLRQLLEYG+FHADPHPGNLL
Sbjct: 327 TSRKVLTMEWVEGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLL 386
Query: 301 ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360
ATP+GKLAFLDFGMMSETPEEARFAIIGHVVH+VNRDYEAMARDYYAL FLSPDVDVTPI
Sbjct: 387 ATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDVTPI 446
Query: 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYA 420
+PALR+FFDDALN +VSELNFKT+VDGLGAV YQYPFNVP YYALILRSLTVLEGLALYA
Sbjct: 447 IPALRDFFDDALNYTVSELNFKTLVDGLGAVFYQYPFNVPPYYALILRSLTVLEGLALYA 506
Query: 421 DPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
DPNFKVLAASYPYFAKRLLTDPNPYLRDAL+ELLFKDG+FR
Sbjct: 507 DPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGKFR 547
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435585|ref|XP_004135575.1| PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic-like [Cucumis sativus] gi|449516547|ref|XP_004165308.1| PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/452 (88%), Positives = 428/452 (94%)
Query: 10 YSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRIFT 69
Y+PELLA+ YGSRP+++L+R L+ILVAL SF +KL +D+ +G LDQNKR+RAAELR IFT
Sbjct: 91 YNPELLAKTYGSRPIEVLQRALKILVALSSFGVKLWLDKNSGQLDQNKRRRAAELRGIFT 150
Query: 70 RLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFS 129
RLGPTFVKLGQGLSTRPDICPPEYLEELS+LQD LPTFPDAEAF CIE EL LTLDSIFS
Sbjct: 151 RLGPTFVKLGQGLSTRPDICPPEYLEELSQLQDDLPTFPDAEAFLCIEEELSLTLDSIFS 210
Query: 130 SISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI 189
S+SPSPIAAASLGQVYKA+LK SG+ VA+KVQRP IEEAIGLDFYLIR +GFLINKYVDI
Sbjct: 211 SLSPSPIAAASLGQVYKAKLKQSGKAVAIKVQRPNIEEAIGLDFYLIRSLGFLINKYVDI 270
Query: 190 ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTME 249
I++DVVALIDEFA RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTME
Sbjct: 271 ISSDVVALIDEFARRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTME 330
Query: 250 WVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAF 309
WV+GVKLNEQ AIE QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAF
Sbjct: 331 WVDGVKLNEQEAIEKQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAF 390
Query: 310 LDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369
LDFGMMSETPEEAR AIIGHVVHMVNRDYEAMARDYYALDFLSPD DV+PIVP LRNFFD
Sbjct: 391 LDFGMMSETPEEARCAIIGHVVHMVNRDYEAMARDYYALDFLSPDTDVSPIVPVLRNFFD 450
Query: 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA 429
D LN++VSELNFKTIVDGLGAV YQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA
Sbjct: 451 DTLNATVSELNFKTIVDGLGAVFYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA 510
Query: 430 SYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
SYPYFAKRLLTDPNPYLRDAL+ELLFKDG+FR
Sbjct: 511 SYPYFAKRLLTDPNPYLRDALIELLFKDGKFR 542
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357469819|ref|XP_003605194.1| aarF domain-containing protein kinase, putative [Medicago truncatula] gi|355506249|gb|AES87391.1| aarF domain-containing protein kinase, putative [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/461 (86%), Positives = 433/461 (93%)
Query: 1 MARAVNASVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKR 60
+ARAVNASVYSP+L+A YGS+P+++ R QI+ LGSF LKLL +QRNGV DQNKR R
Sbjct: 92 LARAVNASVYSPQLVASRYGSKPLKVAGRAFQIVFNLGSFGLKLLWEQRNGVADQNKRIR 151
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A ELR IFT+LGPTFVKLGQGLSTRPDICP EYLEELSELQD LPTFPD +AF CIEREL
Sbjct: 152 AIELRNIFTKLGPTFVKLGQGLSTRPDICPSEYLEELSELQDGLPTFPDEDAFECIEREL 211
Query: 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
GL+LDSIFS+ISPSPIAAASLGQVYKA+LK SG++VAVKVQRPGIEEAIGLDFYLIRG+G
Sbjct: 212 GLSLDSIFSTISPSPIAAASLGQVYKARLKRSGKVVAVKVQRPGIEEAIGLDFYLIRGLG 271
Query: 181 FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY 240
FLINKYVD ITTDVVALIDEFA RV+QELNYVQEGQNARRFKKLYADKED+LVPD+FWDY
Sbjct: 272 FLINKYVDRITTDVVALIDEFACRVFQELNYVQEGQNARRFKKLYADKEDILVPDVFWDY 331
Query: 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLL 300
TS KVLT++W+EGVKLN+Q AIE QGL VLDLVN+GIQCSLRQLLEYGYFHADPHPGNLL
Sbjct: 332 TSAKVLTIDWIEGVKLNDQEAIERQGLNVLDLVNSGIQCSLRQLLEYGYFHADPHPGNLL 391
Query: 301 ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360
ATPEGKLAFLDFGMMSETPEEARFAIIGHVVH+VNRDYEAMA+DYYALDFLS D+DV+PI
Sbjct: 392 ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMAQDYYALDFLSRDIDVSPI 451
Query: 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYA 420
VPALRNFFDDALN +VSELNFKTIVDGLG VLY+YPFNVPAYYALILRSLTVLEGLALYA
Sbjct: 452 VPALRNFFDDALNYTVSELNFKTIVDGLGNVLYEYPFNVPAYYALILRSLTVLEGLALYA 511
Query: 421 DPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
DPNFKVLAASYPYFAKRLLTDPNPYLRDAL+ELLFKDG+FR
Sbjct: 512 DPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGKFR 552
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225464716|ref|XP_002263052.1| PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/454 (89%), Positives = 440/454 (96%)
Query: 8 SVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRI 67
SVY+PEL++ Y SRP+++LRRT++IL+ +GSF+LKL++DQ NG LDQNKR RA +LR+I
Sbjct: 104 SVYTPELVSNKYRSRPIKVLRRTMEILIGVGSFALKLVLDQSNGQLDQNKRIRAVDLRKI 163
Query: 68 FTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSI 127
T+LGPTFVK+GQGLSTRPD+CPPEYLEELS+LQDALPTFPDAEAFSCIE+ELGL LDSI
Sbjct: 164 CTKLGPTFVKIGQGLSTRPDLCPPEYLEELSQLQDALPTFPDAEAFSCIEKELGLPLDSI 223
Query: 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYV 187
FSSISPSPIAAASLGQVYKAQLKYSGQ+VAVKVQRPGIEEAIGLDFYL+RG+GFLINKYV
Sbjct: 224 FSSISPSPIAAASLGQVYKAQLKYSGQVVAVKVQRPGIEEAIGLDFYLLRGLGFLINKYV 283
Query: 188 DIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLT 247
D+I++DVVALIDEFA RVYQELNYVQEGQNARRFKKLYADK+DVLVPDIFWDYTSGKVLT
Sbjct: 284 DVISSDVVALIDEFARRVYQELNYVQEGQNARRFKKLYADKQDVLVPDIFWDYTSGKVLT 343
Query: 248 MEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL 307
MEWV+GVKLNEQ AIE QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL
Sbjct: 344 MEWVDGVKLNEQAAIERQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL 403
Query: 308 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367
AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV+PIVPAL+NF
Sbjct: 404 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVSPIVPALQNF 463
Query: 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427
FD ALNS+VSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL
Sbjct: 464 FDGALNSTVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 523
Query: 428 AASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
AASYPYFAKRLLTDPNPYLRDAL+ELLFKDGRFR
Sbjct: 524 AASYPYFAKRLLTDPNPYLRDALIELLFKDGRFR 557
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296087563|emb|CBI34152.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/454 (89%), Positives = 440/454 (96%)
Query: 8 SVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRI 67
SVY+PEL++ Y SRP+++LRRT++IL+ +GSF+LKL++DQ NG LDQNKR RA +LR+I
Sbjct: 15 SVYTPELVSNKYRSRPIKVLRRTMEILIGVGSFALKLVLDQSNGQLDQNKRIRAVDLRKI 74
Query: 68 FTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSI 127
T+LGPTFVK+GQGLSTRPD+CPPEYLEELS+LQDALPTFPDAEAFSCIE+ELGL LDSI
Sbjct: 75 CTKLGPTFVKIGQGLSTRPDLCPPEYLEELSQLQDALPTFPDAEAFSCIEKELGLPLDSI 134
Query: 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYV 187
FSSISPSPIAAASLGQVYKAQLKYSGQ+VAVKVQRPGIEEAIGLDFYL+RG+GFLINKYV
Sbjct: 135 FSSISPSPIAAASLGQVYKAQLKYSGQVVAVKVQRPGIEEAIGLDFYLLRGLGFLINKYV 194
Query: 188 DIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLT 247
D+I++DVVALIDEFA RVYQELNYVQEGQNARRFKKLYADK+DVLVPDIFWDYTSGKVLT
Sbjct: 195 DVISSDVVALIDEFARRVYQELNYVQEGQNARRFKKLYADKQDVLVPDIFWDYTSGKVLT 254
Query: 248 MEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL 307
MEWV+GVKLNEQ AIE QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL
Sbjct: 255 MEWVDGVKLNEQAAIERQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL 314
Query: 308 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367
AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV+PIVPAL+NF
Sbjct: 315 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVSPIVPALQNF 374
Query: 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427
FD ALNS+VSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL
Sbjct: 375 FDGALNSTVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 434
Query: 428 AASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
AASYPYFAKRLLTDPNPYLRDAL+ELLFKDGRFR
Sbjct: 435 AASYPYFAKRLLTDPNPYLRDALIELLFKDGRFR 468
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255565769|ref|XP_002523874.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] gi|223536962|gb|EEF38600.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/458 (89%), Positives = 435/458 (94%)
Query: 6 NASVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELR 65
N+S YSPELLA YGS+P+++LRRTL+IL AL SF+LKL +DQRNGV + NK+ RA ELR
Sbjct: 70 NSSAYSPELLASKYGSKPIEVLRRTLEILTALSSFALKLYLDQRNGVFNINKKLRATELR 129
Query: 66 RIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLD 125
RIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPD EAFSCIE+ELGL LD
Sbjct: 130 RIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDEEAFSCIEKELGLPLD 189
Query: 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINK 185
SIFSSISPSPIAAASLGQVYKAQLK SG IVAVKVQRPGIEEAIGLDFYLIRG+G LINK
Sbjct: 190 SIFSSISPSPIAAASLGQVYKAQLKSSGHIVAVKVQRPGIEEAIGLDFYLIRGLGILINK 249
Query: 186 YVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKV 245
YVDIIT+DVVALIDEFA RVYQELNYVQEGQNARRF+KLYADKED+LVPDI+WDYTSGK+
Sbjct: 250 YVDIITSDVVALIDEFARRVYQELNYVQEGQNARRFRKLYADKEDILVPDIYWDYTSGKI 309
Query: 246 LTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG 305
LTMEWV GVKLNEQ AIE QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG
Sbjct: 310 LTMEWVNGVKLNEQNAIERQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG 369
Query: 306 KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365
KLAFLDFGMMSETPEEAR AIIGHVVHMVNRDYEAMARDYYALDFLS DVDV+PIVPAL+
Sbjct: 370 KLAFLDFGMMSETPEEARSAIIGHVVHMVNRDYEAMARDYYALDFLSRDVDVSPIVPALQ 429
Query: 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFK 425
NFFDDAL+ +VSELNFKT+VDGLGAV YQYPFNVPAYYALILRSLTVLEGLALYADPNFK
Sbjct: 430 NFFDDALSYTVSELNFKTLVDGLGAVFYQYPFNVPAYYALILRSLTVLEGLALYADPNFK 489
Query: 426 VLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHV 463
VLAASYPYFAKRLLTDPNPYLRDAL+ELLFKDGRFRH+
Sbjct: 490 VLAASYPYFAKRLLTDPNPYLRDALIELLFKDGRFRHM 527
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242090083|ref|XP_002440874.1| hypothetical protein SORBIDRAFT_09g011240 [Sorghum bicolor] gi|241946159|gb|EES19304.1| hypothetical protein SORBIDRAFT_09g011240 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/462 (83%), Positives = 427/462 (92%), Gaps = 1/462 (0%)
Query: 1 MARAVNASVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRK- 59
M RA A+VYSPELLA YGSRP ++ R ++L L SF +K+L+D+R G +R+
Sbjct: 90 MVRAAGATVYSPELLAARYGSRPFKVALRAAEVLSKLASFGVKVLLDERKGESSSERRRA 149
Query: 60 RAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERE 119
RA ELR I TRLGPTFVK+GQGLSTRPD+CP EYLEEL+ELQD+LPTFPD EAF+CIERE
Sbjct: 150 RAVELRTILTRLGPTFVKIGQGLSTRPDLCPAEYLEELAELQDSLPTFPDEEAFACIERE 209
Query: 120 LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGV 179
LG LDSI+S+ISPSPIAAASLGQVYKA+LKYSG++VAVKVQRPGIE+AIGLDFYL+RG+
Sbjct: 210 LGFALDSIYSTISPSPIAAASLGQVYKARLKYSGKLVAVKVQRPGIEDAIGLDFYLLRGL 269
Query: 180 GFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD 239
GFLINKY+DI+T+DVVAL+DEFA RV+QELNYVQEGQNARRFKKLYADK+DVLVPDIFWD
Sbjct: 270 GFLINKYIDIVTSDVVALMDEFARRVFQELNYVQEGQNARRFKKLYADKQDVLVPDIFWD 329
Query: 240 YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNL 299
YTS KVLTMEW+EGVKLN+Q IESQGLKVLDLVN GIQCSLRQLLEYGYFHADPHPGN+
Sbjct: 330 YTSAKVLTMEWIEGVKLNQQAVIESQGLKVLDLVNIGIQCSLRQLLEYGYFHADPHPGNI 389
Query: 300 LATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359
LATPEGKLAFLDFGMMSETPE+AR AIIGHVVH+VNRDYEAMARDYYALDFL PDVDV+P
Sbjct: 390 LATPEGKLAFLDFGMMSETPEDARVAIIGHVVHLVNRDYEAMARDYYALDFLEPDVDVSP 449
Query: 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALY 419
IVPAL+NFFDDALN++VSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALY
Sbjct: 450 IVPALKNFFDDALNATVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALY 509
Query: 420 ADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
ADP+FKVLAASYPYFAKRLLTDPNPYLRDAL+ELLFKDGRFR
Sbjct: 510 ADPDFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGRFR 551
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 487 | ||||||
| TAIR|locus:2019838 | 711 | AT1G79600 [Arabidopsis thalian | 0.946 | 0.648 | 0.841 | 9.2e-210 | |
| TAIR|locus:2013041 | 692 | AT1G71810 [Arabidopsis thalian | 0.889 | 0.625 | 0.436 | 4.5e-98 | |
| TAIR|locus:2093711 | 793 | AT3G24190 [Arabidopsis thalian | 0.915 | 0.562 | 0.419 | 1.2e-97 | |
| TAIR|locus:2128116 | 682 | ACDO1 "ABC1-like kinase relate | 0.928 | 0.662 | 0.379 | 7.7e-87 | |
| TAIR|locus:2177719 | 761 | ATH13 "AT5G64940" [Arabidopsis | 0.741 | 0.474 | 0.352 | 5.4e-61 | |
| TAIR|locus:2056123 | 814 | ATATH8 "AT2G39190" [Arabidopsi | 0.901 | 0.539 | 0.324 | 7.1e-61 | |
| UNIPROTKB|Q74E76 | 561 | GSU1088 "Quinone biosynthesis | 0.798 | 0.693 | 0.299 | 4.1e-49 | |
| TIGR_CMR|GSU_1088 | 561 | GSU_1088 "ubiquinone biosynthe | 0.798 | 0.693 | 0.299 | 4.1e-49 | |
| UNIPROTKB|Q3ACS7 | 541 | CHY_1218 "ABC1 family protein" | 0.765 | 0.689 | 0.311 | 4.2e-47 | |
| TIGR_CMR|CHY_1218 | 541 | CHY_1218 "ABC1 family protein" | 0.765 | 0.689 | 0.311 | 4.2e-47 |
| TAIR|locus:2019838 AT1G79600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2028 (719.0 bits), Expect = 9.2e-210, P = 9.2e-210
Identities = 388/461 (84%), Positives = 422/461 (91%)
Query: 1 MARAVNASVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKR 60
+ RA++AS+YSPEL+AR +GS+P + LRR+L+IL ALG F+LKL IDQ+ G L++N +KR
Sbjct: 87 LGRAIDASIYSPELIARKHGSQPFKALRRSLEILGALGGFALKLGIDQKQGNLEKNMKKR 146
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A ELRRIFTRLGPTFVKLGQGLSTRPD+CPP+YLEEL+ELQDALPTFPDAEAF+CIEREL
Sbjct: 147 AIELRRIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIEREL 206
Query: 121 GLTLDXXXXXXXXXXXXXXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
L+L+ LGQVYKAQL+YSGQ+VAVKVQRPGIEEAIGLDFYLIRGVG
Sbjct: 207 DLSLETIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIRGVG 266
Query: 181 FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY 240
LINKYVD ITTDV+ LIDEFA RVYQELNYVQE QNARRFKKLYADK DVLVPDIFWDY
Sbjct: 267 KLINKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDY 326
Query: 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLL 300
TS KVLTMEWVEG KLNEQ+AIESQGLKVLDLVNTGIQCSLRQLLEYG+FHADPHPGNLL
Sbjct: 327 TSRKVLTMEWVEGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLL 386
Query: 301 ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360
ATP+GKLAFLDFGMMSETPEEARFAIIGHVVH+VNRDYEAMARDYYAL FLSPDVDVTPI
Sbjct: 387 ATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDVTPI 446
Query: 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYA 420
+PALR+FFDDALN +VSELNFKT+VDGLGAV YQYPFNVP YYALILRSLTVLEGLALYA
Sbjct: 447 IPALRDFFDDALNYTVSELNFKTLVDGLGAVFYQYPFNVPPYYALILRSLTVLEGLALYA 506
Query: 421 DPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
DPNFKVLAASYPYFAKRLLTDPNPYLRDAL+ELLFKDG+FR
Sbjct: 507 DPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGKFR 547
|
|
| TAIR|locus:2013041 AT1G71810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 194/444 (43%), Positives = 288/444 (64%)
Query: 19 YGSRPVQLLRRTLQILVALGS-FSLKLLIDQRNGVLDQNKRKRAAELRRIFTRLGPTFVK 77
Y +P+ LLRR QI F L+L D+ DQ + RAAELR++ LGP +VK
Sbjct: 78 YKKKPLILLRRLAQIGTTFSYWFGLRLA-DEALERSDQMFKVRAAELRKLLVELGPAYVK 136
Query: 78 LGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDXXXXXXXXXXXX 137
+ Q +S+RPD+ PP YL+ELS LQD + F AF+ IE ELGL +D
Sbjct: 137 IAQAVSSRPDLIPPIYLDELSLLQDQITPFSTEVAFNMIEDELGLPIDELFSEISPEPVA 196
Query: 138 XXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVAL 197
LGQVY+A+L+ SG++VAVKVQRPG+ AI LD ++R + LI K +D+ A+
Sbjct: 197 AASLGQVYQARLRRSGKVVAVKVQRPGVRAAIALDTLILRYIAGLIKK-AGRFNSDLEAV 255
Query: 198 IDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLN 257
+DE+A+ +++E++Y+ E QN +F+KLY +DVLVP ++ +Y++ KVL MEWVEG KLN
Sbjct: 256 VDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLVPKMYTEYSTSKVLVMEWVEGQKLN 315
Query: 258 EQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317
E + L LV G+ CS QLLEYG++HADPHPGN L T +G+LA+LDFGMM +
Sbjct: 316 E--------VNDLYLVEVGVYCSFNQLLEYGFYHADPHPGNFLRTYDGQLAYLDFGMMGD 367
Query: 318 TPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVS 377
E R + +H+VNRD++A+A+D+ L L P + + + AL + F DA++ V
Sbjct: 368 FRPELRDGFMEACLHLVNRDFKALAKDFVTLGLLPPTAEKSAVTKALTDVFQDAISRGVR 427
Query: 378 ELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437
++F ++ LG +Y++ F +P Y++L++RSL VLEG+A+ PN+KVL ++YP+ A++
Sbjct: 428 NISFGDLLGDLGKTMYRFKFRIPPYFSLVIRSLAVLEGIAIGISPNYKVLGSTYPWIARK 487
Query: 438 LLTDPNPYLRDALVELLFKDGRFR 461
+LTD +P L+ +L LL+++G FR
Sbjct: 488 ILTDSSPQLKSSLQNLLYEEGVFR 511
|
|
| TAIR|locus:2093711 AT3G24190 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
Identities = 191/455 (41%), Positives = 288/455 (63%)
Query: 9 VYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRIF 68
VY PE ++ +G RP + R +Q+L G F ++ D N + +N+ RA ELR I
Sbjct: 140 VYDPETISAYWGKRPRAVASRVIQLLSVAGGFLSRIAGDVINKKVKENEVARAIELREIV 199
Query: 69 TRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDXXX 128
T LGP ++KLGQ LS RPDI P + EL +L D +P++PD A + IE ELG
Sbjct: 200 TSLGPAYIKLGQALSIRPDILSPAAMTELQKLCDKVPSYPDDVAMALIEEELGKPWYDVY 259
Query: 129 XXXXXXXXXXXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVD 188
LGQVYK +LK +G +VAVKVQRP + E + +D ++IR +G + K+
Sbjct: 260 SELSPSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFVIRNLGLFLRKFPQ 319
Query: 189 IITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYA-DKEDVLVPDIFWDYTSGKVLT 247
+ + DVV L+DE+A+R ++EL+YV EG+N F ++ D V+VP + YTS KVLT
Sbjct: 320 V-SVDVVGLVDEWAARFFEELDYVNEGENGTYFAEMMKKDLPQVVVPKTYQKYTSRKVLT 378
Query: 248 MEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL 307
W++G KL++ +IES V +LVN G+ C L+QLL+ G+FHADPHPGN++ TP+GKL
Sbjct: 379 TSWIDGEKLSQ--SIESD---VGELVNVGVICYLKQLLDTGFFHADPHPGNMIRTPDGKL 433
Query: 308 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367
A LDFG++++ ++ ++ +I + H+++RDY+A+ +D+ L F+ V++ PI+P L
Sbjct: 434 AILDFGLVTKLTDDQKYGMIEAIAHLIHRDYDAIVKDFVKLGFIPDGVNLAPILPVLAKV 493
Query: 368 FDDALNSS-VSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426
FD AL +NF+ + L + + YPF +P Y+ALI+R++ VLEG+AL +P F +
Sbjct: 494 FDQALEGGGAKNINFQELAADLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPEFAI 553
Query: 427 LAASYPYFAKRLLTDPNPYLRDALVELLF-KDGRF 460
+ +YPY A+RLLTD +P LR+AL ++ K G F
Sbjct: 554 VDEAYPYIAQRLLTDESPRLREALRYTIYGKTGVF 588
|
|
| TAIR|locus:2128116 ACDO1 "ABC1-like kinase related to chlorophyll degradation and oxidative stress 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 173/456 (37%), Positives = 272/456 (59%)
Query: 10 YSPELL-ARNYGSRP--VQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRR 66
YSPE + ++ SR V L+ R ++I+ LG + L D G ++ RA +LR
Sbjct: 113 YSPETVRSKVLESRGAVVSLVSRGVEIVWTLGLYWSTLTYDFLVGRDEEVVPFRARQLRN 172
Query: 67 IFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDX 126
+ LGP+F+K GQ L+ RPDI +Y+ EL LQD +P FP+ AF+ IE ELG L+
Sbjct: 173 LLCNLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNEVAFNIIEEELGQPLEN 232
Query: 127 XXXXXXXXXXXXXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKY 186
LGQVY+A L+ +G+ VA+KVQRP IE I D +L R + +N +
Sbjct: 233 IFSKISSQTIAAASLGQVYRATLRATGEDVAIKVQRPQIEPIIYRDLFLFRTLASFLNGF 292
Query: 187 -VDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKV 245
+ + + ++DEF ++ +EL+Y E +N F + + D V +P ++ + +V
Sbjct: 293 SLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPGVYKNLCGPRV 352
Query: 246 LTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG 305
L MEW++G++ + AI+ G+ + + G+ +LRQLLE+G FH DPHPGN+ A +G
Sbjct: 353 LVMEWIDGIRCTDPQAIKDAGIDLNGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMQDG 412
Query: 306 KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365
++A++DFG ++ ++ + +I VVH VN DY MA D+ L FL+ D DV+PIVPAL
Sbjct: 413 RIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEMANDFTRLGFLAKDTDVSPIVPALE 472
Query: 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFK 425
+ ++ +++ NF+++ ++Y +P +P ++L++RSL EG+ P+FK
Sbjct: 473 AIWQNSAGKGLADFNFRSVTGQFNKLVYDFPIRIPERFSLVIRSLLTQEGICFTLKPDFK 532
Query: 426 VLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFR 461
L +YPY AKRLLTDPNP LR+ L+++LFKDG F+
Sbjct: 533 FLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGVFQ 568
|
|
| TAIR|locus:2177719 ATH13 "AT5G64940" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 134/380 (35%), Positives = 206/380 (54%)
Query: 27 LRRTLQILVALGSFSLKLLIDQRN-----GVLDQNK---RKRAAE-LRRIFTRLGPTFVK 77
++RTL+I + F + + + G+ ++ K RK A+ L+ RLGPTF+K
Sbjct: 176 IQRTLEIWGFVVQFIFRTWLSNKKFSYKGGMTEEKKVLRRKVLAKWLKENILRLGPTFIK 235
Query: 78 LGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDXXXXXXXXXXXX 137
+GQ STR DI P EY+++LSELQD +P FP A A S +E ELG +++
Sbjct: 236 IGQQFSTRVDILPQEYVDQLSELQDQVPPFPSATALSIVEEELGGSVEDIFDRFDYEPIA 295
Query: 138 XXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKY---VDIITTDV 194
LGQV++A+LK GQ V +KVQRPG+++ +D +R + + K D D
Sbjct: 296 AASLGQVHRARLK--GQEVVLKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDW 353
Query: 195 VALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGV 254
VA+ DE AS +YQE++Y +E N+ F + D E V VP I+W+YT+ +VLTME+V G+
Sbjct: 354 VAIYDECASVLYQEIDYTKEAANSELFANNFKDLEYVKVPSIYWEYTTPQVLTMEYVPGI 413
Query: 255 KLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE--GKLAFLDF 312
K+N+ A++ G+ L ++ L Q+L +G+FHADPHPGN+ G+L F DF
Sbjct: 414 KINKIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDF 473
Query: 313 GMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV-PAL--RNFFD 369
GMM R ++ + +D + + + + L P D+T + AL N F+
Sbjct: 474 GMMGSISPNIREGLLEAFYGVYEKDPDKVLQAMVQMGVLVPTGDLTAVRRTALFFLNSFE 533
Query: 370 DALNSSVSELNFKTIVDGLG 389
+ L + E + LG
Sbjct: 534 ERLAAQRKEKEEIAAAEELG 553
|
|
| TAIR|locus:2056123 ATATH8 "AT2G39190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 150/462 (32%), Positives = 236/462 (51%)
Query: 9 VYSPELLARNYGSRPVQLLRRTLQILVA--LGSFSLKLLIDQRNGVLDQNKRKRAAELRR 66
VY + +A + RP + R L++ A + + L+ + L+ +++ L+
Sbjct: 145 VYDSQAVADYFNCRPHVVAFRLLEVFSAFTIAAIRLRTSASVKGKSLEASEQIFGMVLKE 204
Query: 67 IFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDX 126
LGPTF+K+GQ LSTRPDI E + LSEL D +P FP EA +E ELG ++
Sbjct: 205 TMLHLGPTFIKVGQSLSTRPDIIGTEISKALSELHDRIPPFPWPEAVKILEGELGGPVES 264
Query: 127 XXXXXXXXXXXXXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIR-GVGFLINK 185
GQVY+ + G VAVKVQRP + A+ D Y++R G+G L +
Sbjct: 265 FFSQFSQETVAAASFGQVYRGRT-LDGADVAVKVQRPDLRHAVLRDIYILRLGLGVL--R 321
Query: 186 YVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKV 245
V D+ DE + EL++ E NA F++ +A + VP ++ T +V
Sbjct: 322 KVAKRENDIRVYADELGMGLAGELDFTLEAANASEFQEAHARFSYIRVPKVYQHLTRKRV 381
Query: 246 LTMEWVEGVKLNEQVAI------------ESQGL----KVLDLVNTGIQCSLRQLLEYGY 289
LTMEW+ G + +AI E Q + ++LDLVN G++ +L QLL+ G
Sbjct: 382 LTMEWMVGESPTDLLAISSGYSDHDNESHEKQKIEARRRLLDLVNKGVEATLVQLLDTGI 441
Query: 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349
HADPHPGNL T ++ FLDFG++ + + A++ +VH+VN D+ + +D
Sbjct: 442 LHADPHPGNLRYTTSRQIGFLDFGLVCRMQRKHQLAMLASIVHIVNGDWACLVESLIDMD 501
Query: 350 FLSPDVDVTPIVPALRNFFDDA-LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILR 408
++P V+ L + L + + ++ F ++ + V +Y +P Y+ L+LR
Sbjct: 502 VITPGVNTRRFTLDLEYALGEVKLINGIPDIEFTKVLSKIVNVALKYQLRMPPYFTLVLR 561
Query: 409 SLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450
SL LEGLA DPNFK A+YP+ ++L+T+ + R L
Sbjct: 562 SLACLEGLAAAGDPNFKTFEAAYPFVVQKLITENSAATRKIL 603
|
|
| UNIPROTKB|Q74E76 GSU1088 "Quinone biosynthesis kinase AarF, putative" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 120/401 (29%), Positives = 206/401 (51%)
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A +R LGPTFVKLGQ LSTRPD+ P ++ E + LQD +P+FP +A I REL
Sbjct: 62 AERMRLALEELGPTFVKLGQILSTRPDVIPRSFVLEFARLQDQVPSFPFEDALDQIRREL 121
Query: 121 GLTLDXXXXXXXXXXXXXXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
G + + QV++A+L SG+ V +KV+RPG+ EA+ D + G+
Sbjct: 122 GRDPEERFSFIDPEPLAAASIAQVHRARL-VSGEEVVIKVRRPGVVEAVETDIDAMMGLA 180
Query: 181 FLINKYV---DIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF 237
L +++ DI D V L+ EFA + +E+++ +EG RF + +A + P +
Sbjct: 181 VLAERHLPRSDIY--DPVGLVKEFARTIRREMDFAREGHTIERFAENFAGDPTLYFPTVH 238
Query: 238 WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPG 297
WD T+ +LTME++ G+K+++ A+E G+ + G L+ +L +G+FH DPHPG
Sbjct: 239 WDCTARGLLTMEFINGIKVSDTAALERAGMDRRLIARRGADAFLKMVLTHGFFHGDPHPG 298
Query: 298 NLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDY-EAMARDYYALDFLSPDVD 356
N+L P+ + LD+GM+ + + + ++ +V RD E ++ Y+ + ++ +D
Sbjct: 299 NVLILPDNVICLLDYGMVGRLDAQLKGYLTDILLAIVQRDVDEVISLLLYSGE-IADTLD 357
Query: 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGL 416
+ L D+ + + E+ ++ V+ Y L+ ++L +EG+
Sbjct: 358 TRALKRDLTGLIDNYYETPLQEIEVGRVLLEFLEVITTYHIKFQPDLMLLAKALVAIEGM 417
Query: 417 ALYADPNFKVLAASYPYFAKRLLTD---PNPYLRDALVELL 454
DP F ++ P F K+ + D P +R+ LL
Sbjct: 418 GRELDPAFDMVEHLRP-FMKQAVRDRFSPRQLIREMNSNLL 457
|
|
| TIGR_CMR|GSU_1088 GSU_1088 "ubiquinone biosynthesis protein AarF, putative" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 120/401 (29%), Positives = 206/401 (51%)
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A +R LGPTFVKLGQ LSTRPD+ P ++ E + LQD +P+FP +A I REL
Sbjct: 62 AERMRLALEELGPTFVKLGQILSTRPDVIPRSFVLEFARLQDQVPSFPFEDALDQIRREL 121
Query: 121 GLTLDXXXXXXXXXXXXXXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
G + + QV++A+L SG+ V +KV+RPG+ EA+ D + G+
Sbjct: 122 GRDPEERFSFIDPEPLAAASIAQVHRARL-VSGEEVVIKVRRPGVVEAVETDIDAMMGLA 180
Query: 181 FLINKYV---DIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF 237
L +++ DI D V L+ EFA + +E+++ +EG RF + +A + P +
Sbjct: 181 VLAERHLPRSDIY--DPVGLVKEFARTIRREMDFAREGHTIERFAENFAGDPTLYFPTVH 238
Query: 238 WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPG 297
WD T+ +LTME++ G+K+++ A+E G+ + G L+ +L +G+FH DPHPG
Sbjct: 239 WDCTARGLLTMEFINGIKVSDTAALERAGMDRRLIARRGADAFLKMVLTHGFFHGDPHPG 298
Query: 298 NLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDY-EAMARDYYALDFLSPDVD 356
N+L P+ + LD+GM+ + + + ++ +V RD E ++ Y+ + ++ +D
Sbjct: 299 NVLILPDNVICLLDYGMVGRLDAQLKGYLTDILLAIVQRDVDEVISLLLYSGE-IADTLD 357
Query: 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGL 416
+ L D+ + + E+ ++ V+ Y L+ ++L +EG+
Sbjct: 358 TRALKRDLTGLIDNYYETPLQEIEVGRVLLEFLEVITTYHIKFQPDLMLLAKALVAIEGM 417
Query: 417 ALYADPNFKVLAASYPYFAKRLLTD---PNPYLRDALVELL 454
DP F ++ P F K+ + D P +R+ LL
Sbjct: 418 GRELDPAFDMVEHLRP-FMKQAVRDRFSPRQLIREMNSNLL 457
|
|
| UNIPROTKB|Q3ACS7 CHY_1218 "ABC1 family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 473 (171.6 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 119/382 (31%), Positives = 198/382 (51%)
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A LR + +LGPTF+KLGQ LST+ D+ P + EL +LQD + P S IE+ L
Sbjct: 51 AGNLREMLEKLGPTFIKLGQVLSTQRDLLPKPFQAELEKLQDRVTPVPFEVIASYIEKNL 110
Query: 121 GLTLDXXXXXXXXXXXXXXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
G L +GQVY+A+LK +G+ V VKV+RPG++E I D ++ +
Sbjct: 111 GSPLHDIFIEFDENPIASASIGQVYRAKLK-NGKNVVVKVKRPGVDELIKTDLQILYQIA 169
Query: 181 -FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD 239
F+ NK + + +E S + +EL+Y E +N F++ K+ +++P++FW+
Sbjct: 170 SFIQNKTNWGKINKPLRMWEELKSSLERELDYTGEARNIENFRQNIKYKK-LIIPEVFWN 228
Query: 240 YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNL 299
+T+ +L +E V G+K++E+ + G+ + L ++ + Q+LE GYFHADPHPGN+
Sbjct: 229 FTNENILVLEAVYGIKVSERFQLIEMGIDLDQLARDLVEIFILQILEDGYFHADPHPGNI 288
Query: 300 LATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359
TP G + DFGM+ R +I ++ +V +D+ AR L LS D+ P
Sbjct: 289 AITPLGDIILYDFGMVGFLNPWLREILITLLISVVRKDF---ARISELLIELSQRQDIIP 345
Query: 360 --IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLA 417
I +R + +S L+ ++ L + ++ +P L+ +++ LEG+
Sbjct: 346 AEIKKDVREILNRYYFVPLSSLSLGELLKELLNLAQKHEIIIPPEIVLVAKTIIALEGIV 405
Query: 418 LYADPNFKVLAASYPYFAKRLL 439
+ N V + P A LL
Sbjct: 406 KNLNSNLSVAELAEP-LATNLL 426
|
|
| TIGR_CMR|CHY_1218 CHY_1218 "ABC1 family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 473 (171.6 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 119/382 (31%), Positives = 198/382 (51%)
Query: 61 AAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIEREL 120
A LR + +LGPTF+KLGQ LST+ D+ P + EL +LQD + P S IE+ L
Sbjct: 51 AGNLREMLEKLGPTFIKLGQVLSTQRDLLPKPFQAELEKLQDRVTPVPFEVIASYIEKNL 110
Query: 121 GLTLDXXXXXXXXXXXXXXXLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180
G L +GQVY+A+LK +G+ V VKV+RPG++E I D ++ +
Sbjct: 111 GSPLHDIFIEFDENPIASASIGQVYRAKLK-NGKNVVVKVKRPGVDELIKTDLQILYQIA 169
Query: 181 -FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD 239
F+ NK + + +E S + +EL+Y E +N F++ K+ +++P++FW+
Sbjct: 170 SFIQNKTNWGKINKPLRMWEELKSSLERELDYTGEARNIENFRQNIKYKK-LIIPEVFWN 228
Query: 240 YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNL 299
+T+ +L +E V G+K++E+ + G+ + L ++ + Q+LE GYFHADPHPGN+
Sbjct: 229 FTNENILVLEAVYGIKVSERFQLIEMGIDLDQLARDLVEIFILQILEDGYFHADPHPGNI 288
Query: 300 LATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359
TP G + DFGM+ R +I ++ +V +D+ AR L LS D+ P
Sbjct: 289 AITPLGDIILYDFGMVGFLNPWLREILITLLISVVRKDF---ARISELLIELSQRQDIIP 345
Query: 360 --IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLA 417
I +R + +S L+ ++ L + ++ +P L+ +++ LEG+
Sbjct: 346 AEIKKDVREILNRYYFVPLSSLSLGELLKELLNLAQKHEIIIPPEIVLVAKTIIALEGIV 405
Query: 418 LYADPNFKVLAASYPYFAKRLL 439
+ N V + P A LL
Sbjct: 406 KNLNSNLSVAELAEP-LATNLL 426
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9MA15 | Y1796_ARATH | 2, ., 7, ., -, ., - | 0.8676 | 0.9466 | 0.6483 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 487 | |||
| COG0661 | 517 | COG0661, AarF, Predicted unusual protein kinase [G | 1e-142 | |
| TIGR01982 | 437 | TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | 2e-99 | |
| PRK04750 | 537 | PRK04750, ubiB, putative ubiquinone biosynthesis p | 1e-57 | |
| pfam03109 | 117 | pfam03109, ABC1, ABC1 family | 7e-32 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 4e-07 | |
| COG3642 | 204 | COG3642, COG3642, Mn2+-dependent serine/threonine | 3e-04 | |
| TIGR03724 | 199 | TIGR03724, arch_bud32, Kae1-associated kinase Bud3 | 0.001 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 0.001 | |
| PRK14879 | 211 | PRK14879, PRK14879, serine/threonine protein kinas | 0.002 |
| >gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Score = 419 bits (1078), Expect = e-142
Identities = 175/461 (37%), Positives = 262/461 (56%), Gaps = 6/461 (1%)
Query: 10 YSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKR--KRAAELRRI 67
Y+ L R R LL R L++ L L ++ + + KRA LR
Sbjct: 5 YAVSRLPRIIRVRLRYLLGRLLRLTGRLALLLRLLSWLGKSKLASSEELREKRAERLRLA 64
Query: 68 FTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSI 127
LGPTF+KLGQ LSTRPD+ PPEY EEL++LQD +P FP EA IE ELG ++ +
Sbjct: 65 LEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEEL 124
Query: 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYV 187
FS P PIA+AS+ QV++A LK SG+ VAVKVQRPGI E I D L+R + LI +
Sbjct: 125 FSEFEPEPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLP 183
Query: 188 -DIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVL 246
D+V ++DEF R+ +EL+Y +E NA RF++ + D DV VP ++W+YT+ +VL
Sbjct: 184 PGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVL 243
Query: 247 TMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGK 306
TMEW++G+K+++ A++S G+ +L ++ LRQLL G+FHADPHPGN+L +G+
Sbjct: 244 TMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGR 303
Query: 307 LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366
+ LDFG++ + R + ++ +NRDY+ +A + L ++ PD D P+ A+R
Sbjct: 304 IVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIRA 363
Query: 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426
+ + E++F I+D L V ++P +P L+ R+L ++EG+ DP F +
Sbjct: 364 VLEPIYGKPLEEISFGEILDKLFEVARRFPMRLPPELVLLQRTLLLVEGVGRQLDPRFNL 423
Query: 427 LAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSP 467
A + P AK L +P L L + + P
Sbjct: 424 WAVAQPLLAKWLKKQLSPKLLRELKDEAVA--VLNALPLLP 462
|
Length = 517 |
| >gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Score = 305 bits (784), Expect = 2e-99
Identities = 133/413 (32%), Positives = 213/413 (51%), Gaps = 6/413 (1%)
Query: 26 LLRRTLQILVA--LGSFSLKLLIDQRNGV-LDQNKRKRAAE-LRRIFTRLGPTFVKLGQG 81
L+R LV +G SL+LL +N+ E LR LGPTF+K GQ
Sbjct: 11 LIRYGFLALVESPIGPLSLRLLRRLLLPFSNRENRLMSRGERLRLALEELGPTFIKFGQT 70
Query: 82 LSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASL 141
LSTR D+ P + EELS LQD +P F A IE LG L+ +F+ P+AAAS+
Sbjct: 71 LSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASI 130
Query: 142 GQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYV-DIITTDVVALIDE 200
QV++A+L G+ VAVKV RPGIE+ I D L+ + ++ + D ++ E
Sbjct: 131 AQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKE 189
Query: 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQV 260
F + +EL+ +E NA + + + V VP+++WD TS +VLTMEW++G+ L++
Sbjct: 190 FEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIA 249
Query: 261 AIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320
A++ GL L + L Q+L G+FHAD HPGN+ +GK+ LDFG++ E
Sbjct: 250 ALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309
Query: 321 EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN 380
E R + + +NRDY +A ++ ++ D D+ A+R + + E++
Sbjct: 310 EDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIFGQPLKEIS 369
Query: 381 FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPY 433
++ GL + + + L+ ++L +EG+ DP+ + + P+
Sbjct: 370 VGRLLAGLFKITRDFNMELQPQLLLLQKTLLTVEGVGRQLDPDLNMWKVAEPF 422
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437 |
| >gnl|CDD|235310 PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Score = 199 bits (508), Expect = 1e-57
Identities = 103/316 (32%), Positives = 164/316 (51%), Gaps = 38/316 (12%)
Query: 13 ELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRK-RAAELRRIFTRL 71
EL+ + +RP++L RR+L + ++K K R LR L
Sbjct: 21 ELILSHRLTRPLRLWRRSLFWMPN------------------RHKDKPRGERLRLALEEL 62
Query: 72 GPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSI 131
GP FVK GQ LSTR D+ PP+ +EL+ LQD +P F A A + IE+ LG ++ F
Sbjct: 63 GPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDF 122
Query: 132 SPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIIT 191
P+A+AS+ QV+ A+LK +G+ V VKV RP I I D L+ + V+ +
Sbjct: 123 DIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARW----VERLL 178
Query: 192 TD--------VVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSG 243
D VVA EF ++ EL+ ++E NA + ++ + D + + VP+++WDY S
Sbjct: 179 PDGRRLKPREVVA---EFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSE 235
Query: 244 KVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATP 303
V+ ME + G+ +++ A+ + G + L G++ Q+ G+FHAD HPGN+ +
Sbjct: 236 TVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSY 295
Query: 304 EGKLAF----LDFGMM 315
+ LDFG++
Sbjct: 296 DPPENPRYIALDFGIV 311
|
Length = 537 |
| >gnl|CDD|111949 pfam03109, ABC1, ABC1 family | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 7e-32
Identities = 46/119 (38%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 119 ELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRG 178
ELG ++ +F+ PIAAAS+ QV++A LK G+ VAVKVQRPG+++ I D L++
Sbjct: 2 ELGAPVEEVFAEFDEEPIAAASIAQVHRAVLK-DGEEVAVKVQRPGVKKRIRSDLKLLKF 60
Query: 179 VGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF 237
+ ++ K+ D+ L+DEF + QEL++++E NA +F++ +AD V VP ++
Sbjct: 61 LAKILKKFFPGF--DLDWLVDEFRKSLPQELDFLREAANAEKFRENFADLPWVYVPKVY 117
|
This family includes ABC1 from yeast and AarF from E. coli. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex and E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins. Length = 117 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 4e-07
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 225 YADKEDVLVPDIFWDYTSGK--VLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLR 282
++ + VP + S L MEW+EG L ++V+ E + L + L
Sbjct: 47 LLARKGLPVPKVLASGESDGWSYLLMEWIEGETL-DEVSEEEKEDIAEQLAE--LLAKLH 103
Query: 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFG 313
QL H D HPGN+L L +D+
Sbjct: 104 QLPLLVLCHGDLHPGNILVDDGKILGIIDWE 134
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 217 NARRFKKLYADKE-DVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNT 275
R + L +E V VP ++ ++ ME++EG L + A+E +L V
Sbjct: 46 TRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKD--ALEEARPDLLREV-- 101
Query: 276 GIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVN 335
G L + G H D N++ + G++ F+DFG+ +
Sbjct: 102 GRLVGK--LHKAGIVHGDLTTSNIILS-GGRIYFIDFGLGE-----------------FS 141
Query: 336 RDYEAMARDYYAL 348
+ E A D + L
Sbjct: 142 DEVEDKAVDLHVL 154
|
Length = 204 |
| >gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.001
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 225 YADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQL 284
A K V P ++ K + ME++EG L + IE ++ L G + +L
Sbjct: 53 RARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKD--VIEEGNDEL--LREIGRL--VGKL 106
Query: 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGM--MSETPEE 321
+ G H D N++ + KL +DFG+ S+ E+
Sbjct: 107 HKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEIED 144
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.001
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 10/133 (7%)
Query: 199 DEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
+ FA R Y+EL ++ ++ L DV PD+ D L M ++ G L +
Sbjct: 55 ELFAKRAYRELRLLKHMKHENVIGLL-----DVFTPDLSLDRFHDFYLVMPFM-GTDLGK 108
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
+ E + + + L+ + G H D PGNL + +L LDFG+ +T
Sbjct: 109 LMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168
Query: 319 PEEARFAIIGHVV 331
E + G+VV
Sbjct: 169 DSE----MTGYVV 177
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.002
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 226 ADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNT-GIQCSLRQL 284
A K V VP +++ ++ ME++EG L + I S G++ L+L G L
Sbjct: 56 ARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKD--LINSNGMEELELSREIGRLVGK--L 111
Query: 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGM--MSETPEE 321
G H D N++ + GK+ +DFG+ S+ E+
Sbjct: 112 HSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSKDLED 149
|
Length = 211 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 487 | |||
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 100.0 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 100.0 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 100.0 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 100.0 | |
| KOG1236 | 565 | consensus Predicted unusual protein kinase [Genera | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.98 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.97 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.97 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.97 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.97 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.97 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.97 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.97 | |
| KOG1234 | 363 | consensus ABC (ATP binding cassette) 1 protein [Ge | 99.97 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.97 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.96 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.96 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.96 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.95 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.95 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.95 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.95 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.94 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.94 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.94 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.94 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.94 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.94 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.94 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.94 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.94 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.94 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.93 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.93 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.93 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.93 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.93 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.93 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.93 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.93 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.93 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.93 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.93 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.93 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.93 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.93 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.93 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.93 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.93 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.93 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.93 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.93 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.93 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.93 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.93 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.93 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.93 | |
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 99.93 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.93 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.93 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.93 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.93 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.93 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.93 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.93 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.92 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.92 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.92 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.92 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.92 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.92 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.92 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.92 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.92 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.92 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.92 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.92 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.92 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.92 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.92 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.92 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.92 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.92 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.92 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.91 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.91 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.91 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.91 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.91 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.91 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.9 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.9 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.9 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.9 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.9 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.9 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.9 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.9 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.9 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.9 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.9 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.9 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.9 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.9 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.9 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.9 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.9 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.9 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.9 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.9 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.9 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.89 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.89 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.89 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.89 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.89 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.89 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.89 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.89 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.89 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.89 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.89 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.89 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.89 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.89 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.89 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.89 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.89 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.89 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.89 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.89 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.89 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.89 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.88 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.88 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.88 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.88 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.88 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.88 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.88 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.88 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.88 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.88 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.88 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.88 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.88 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.88 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.88 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.88 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.88 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.88 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.88 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.88 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.88 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.88 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.88 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.88 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.88 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.88 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.88 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.88 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.88 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.88 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.88 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.88 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.87 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.87 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.87 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.87 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.87 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.87 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.87 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.87 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.87 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.87 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.87 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.87 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.87 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.87 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.87 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.87 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.87 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.87 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.87 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.87 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.87 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.87 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.87 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.87 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.87 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.87 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.87 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.87 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.87 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.87 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.87 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.86 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.86 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.86 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.86 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.86 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.86 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.86 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.86 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.86 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.86 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.86 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.86 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.86 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.86 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.86 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.86 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.86 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.86 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.86 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.86 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.86 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.85 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.85 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.85 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.85 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.85 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.85 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.85 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.85 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.85 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.85 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.85 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.85 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.85 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.85 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.85 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.85 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.85 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.85 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.84 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.84 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.84 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.84 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.84 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.84 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.84 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.84 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.84 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.84 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.84 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.84 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.84 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.84 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.84 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.84 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.84 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.84 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.84 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.83 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.83 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.83 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.83 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.83 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.83 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.83 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.83 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.83 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.83 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.83 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.83 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.83 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.83 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.83 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.83 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.83 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.83 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.83 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.83 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.83 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.82 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.82 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.82 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.82 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.82 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.82 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.82 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.82 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.82 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.82 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.82 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.81 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.81 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.81 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.81 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.81 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.81 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.81 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.81 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.81 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.81 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.81 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.81 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.81 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.81 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.8 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.8 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.8 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.79 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.79 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.79 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.78 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.78 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.78 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.78 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.78 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.77 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.77 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.77 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.77 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.76 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.76 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.75 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.74 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.73 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.73 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.73 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.71 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.71 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.71 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.71 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.7 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.65 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.65 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.63 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.6 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.6 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.59 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.55 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.54 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.52 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.52 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.5 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.5 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.49 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.45 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.43 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.4 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.38 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.38 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 99.34 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.32 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 99.29 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 99.27 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.27 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.25 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.21 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.2 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.18 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.15 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.03 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.02 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 98.94 | |
| KOG2270 | 520 | consensus Serine/threonine protein kinase involved | 98.8 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.8 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.68 | |
| PRK05231 | 319 | homoserine kinase; Provisional | 98.59 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 98.57 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 98.55 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 98.51 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 98.45 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.39 | |
| KOG2268 | 465 | consensus Serine/threonine protein kinase [Signal | 98.38 | |
| cd05153 | 296 | HomoserineK_II Homoserine Kinase, type II. Homoser | 98.33 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 98.26 | |
| TIGR00938 | 307 | thrB_alt homoserine kinase, Neisseria type. Homose | 98.25 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.22 | |
| PF03881 | 288 | Fructosamin_kin: Fructosamine kinase; InterPro: IP | 98.16 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.09 | |
| PLN02756 | 418 | S-methyl-5-thioribose kinase | 98.04 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 98.04 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 98.03 | |
| PRK12396 | 409 | 5-methylribose kinase; Reviewed | 98.0 | |
| TIGR02721 | 256 | ycfN_thiK thiamine kinase. Members of this family | 97.98 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.91 | |
| PRK06148 | 1013 | hypothetical protein; Provisional | 97.83 | |
| COG3173 | 321 | Predicted aminoglycoside phosphotransferase [Gener | 97.62 | |
| cd05152 | 276 | MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH | 97.61 | |
| cd05156 | 302 | ChoK_euk Choline Kinase (ChoK) in eukaryotes. The | 97.6 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 97.6 | |
| COG2334 | 331 | Putative homoserine kinase type II (protein kinase | 97.58 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 97.58 | |
| COG3001 | 286 | Uncharacterized protein conserved in bacteria [Fun | 97.51 | |
| TIGR01767 | 370 | MTRK 5-methylthioribose kinase. This enzyme is inv | 97.49 | |
| PRK11768 | 325 | serine/threonine protein kinase; Provisional | 97.48 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 97.47 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 97.46 | |
| PRK06149 | 972 | hypothetical protein; Provisional | 97.41 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 97.34 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 97.28 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 97.15 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 97.04 | |
| KOG2269 | 531 | consensus Serine/threonine protein kinase [Signal | 97.02 | |
| PLN02236 | 344 | choline kinase | 96.96 | |
| PRK10271 | 188 | thiK thiamine kinase; Provisional | 96.37 | |
| PLN02421 | 330 | phosphotransferase, alcohol group as acceptor/kina | 96.29 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 96.23 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 96.09 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 95.91 | |
| COG5072 | 488 | ALK1 Serine/threonine kinase of the haspin family | 95.41 | |
| PF04655 | 253 | APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r | 95.41 | |
| TIGR02906 | 313 | spore_CotS spore coat protein, CotS family. Member | 94.81 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 94.72 | |
| PTZ00384 | 383 | choline kinase; Provisional | 94.59 | |
| PTZ00296 | 442 | choline kinase; Provisional | 94.39 |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-79 Score=632.98 Aligned_cols=431 Identities=40% Similarity=0.666 Sum_probs=395.1
Q ss_pred HHHHHHccCchhHHhHHHHHHHHHHHHHHHHHHhhh--cCccchhhhHHHHHHHHHHHhcChHHHHHHHHhhcCCCCCCH
Q 011399 14 LLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQR--NGVLDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPP 91 (487)
Q Consensus 14 ~~~~~~~~~~~~~~~R~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p~ 91 (487)
.+....+.+....+.+.......+..+.....+... .........+++++|+++|++|||+|||+||+||||+|++|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~ 88 (517)
T COG0661 9 RLPRIIRVRLRYLLGRLLRLTGRLALLLRLLSWLGKSKLASSEELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPP 88 (517)
T ss_pred hhccceeeeehHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCH
Confidence 333444445555555555544433333333322221 111233456789999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHH
Q 011399 92 EYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGL 171 (487)
Q Consensus 92 ~~~~~l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~ 171 (487)
+|+++|++|||++||+|++.++++|++++|.+++++|++|+++|||+||+||||+|+++ +|+.|||||+||++.+.+..
T Consensus 89 e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~ 167 (517)
T COG0661 89 EYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEA 167 (517)
T ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCCchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhc-ccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEee
Q 011399 172 DFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEW 250 (487)
Q Consensus 172 dl~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~ 250 (487)
|+.+|+.++.+.+++.+. ...++..++++|.+.+..|+||++||+|+++|+++|++.+.++||+|||++|++++|||||
T Consensus 168 DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~ 247 (517)
T COG0661 168 DLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEW 247 (517)
T ss_pred HHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEe
Confidence 999999999999998875 4589999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHH
Q 011399 251 VEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHV 330 (487)
Q Consensus 251 ~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~ 330 (487)
++|.++++....+..|.+...+....+.++++|+..+|+||+|||||||+++.+|++.++|||+++.++++.+..++.++
T Consensus 248 i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~r~~l~~~~ 327 (517)
T COG0661 248 IDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPKFRRYLAELL 327 (517)
T ss_pred eCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCCHHHHHHHHHHH
Confidence 99999999998899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 011399 331 VHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (487)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (487)
.++..+|++.++..+..+|++++..|...+...+..++.++++.+.+..+++.+...+..+.+++++.+|+.+.++.|++
T Consensus 328 ~a~~~rD~~~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~p~~l~ll~r~~ 407 (517)
T COG0661 328 LAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIRAVLEPIYGKPLEEISFGEILDKLFEVARRFPMRLPPELVLLQRTL 407 (517)
T ss_pred HHHHhhCHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 411 TVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 411 ~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
.++||+++.+||+++++..+.|++.++...+.+|.
T Consensus 408 ~~vEg~~~~ldp~~~~~~~a~p~~~~~~~~~~~~~ 442 (517)
T COG0661 408 LLVEGVGRQLDPRFNLWAVAQPLLAKWLKKQLSPK 442 (517)
T ss_pred HHHHHHHHhhCccccHHHHhhHHHHHHHHHhhhHH
Confidence 99999999999999999999999999998887776
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-79 Score=633.17 Aligned_cols=420 Identities=28% Similarity=0.481 Sum_probs=392.4
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHhhhcCc--------------cchhhhHHHHHHHHHHHhcChHHHHHHHHhhcCCCCCC
Q 011399 25 QLLRRTLQILVALGSFSLKLLIDQRNGV--------------LDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICP 90 (487)
Q Consensus 25 ~~~~R~~~i~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p 90 (487)
..+.|+.+|+.++.+||++.++...... ......++|+++|.+|++|||+|||+||+||||+|++|
T Consensus 2 ~~~~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP 81 (537)
T PRK04750 2 MELFRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFP 81 (537)
T ss_pred chhHHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhhcccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCC
Confidence 4678999999999999998776432100 01122367999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHH
Q 011399 91 PEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIG 170 (487)
Q Consensus 91 ~~~~~~l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~ 170 (487)
++|+++|++|||++||+|++++++++++++|.+++++|.+||++|||+||+||||+|+++.+|+.||||+++|++.+.+.
T Consensus 82 ~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~ 161 (537)
T PRK04750 82 PDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVID 161 (537)
T ss_pred HHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999956999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhc-ccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEe
Q 011399 171 LDFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTME 249 (487)
Q Consensus 171 ~dl~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE 249 (487)
.|+++|+.++.+++++.+. ...++.++++++.+.+.+|+||.+|++|+.+++++|.+.+.++||++||++|+..+||||
T Consensus 162 ~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE 241 (537)
T PRK04750 162 ADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVME 241 (537)
T ss_pred HHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEe
Confidence 9999999999999987664 456889999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCC----cEEEEecCCCCCCCHHHHHH
Q 011399 250 WVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG----KLAFLDFGMMSETPEEARFA 325 (487)
Q Consensus 250 ~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g----~i~l~DFGla~~l~~~~~~~ 325 (487)
|++|+++++.......+.+...+....+...+.+++.+|+||+|||||||+++.+| +++++|||+++.++++.+..
T Consensus 242 ~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~~r~~ 321 (537)
T PRK04750 242 RMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKEDKRY 321 (537)
T ss_pred eecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHHHHHH
Confidence 99999999876677778888888889999999999999999999999999999988 99999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHH
Q 011399 326 IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYAL 405 (487)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~ 405 (487)
+...+.++..+|++.++..+..+|++++.+|+..+...+..+++++++.+.++++++.++.++..+.+++.+.+||++++
T Consensus 322 l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~l~~i~~~~~l~~l~~~~r~~~~~ip~~l~l 401 (537)
T PRK04750 322 LAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIFDKPLAEISFGHVLLRLFNTARRFNVEIQPQLVL 401 (537)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHCCCcccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 406 ILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 406 l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
+.|++.++||+++.+||++|++..++||+.+++.++.+|
T Consensus 402 l~ktl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~ 440 (537)
T PRK04750 402 LQKTLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGP 440 (537)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCh
Confidence 999999999999999999999999999999988776665
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-75 Score=601.86 Aligned_cols=418 Identities=31% Similarity=0.535 Sum_probs=385.5
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhhcC---------------ccchhhhHHHHHHHHHHHhcChHHHHHHHHhhcCCCCCCH
Q 011399 27 LRRTLQILVALGSFSLKLLIDQRNG---------------VLDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPP 91 (487)
Q Consensus 27 ~~R~~~i~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p~ 91 (487)
++|+++|+.++.+|||+.++.+..+ ..+....++|+++|++|++|||+|||+||+||||+|++|+
T Consensus 1 ~~R~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~ 80 (437)
T TIGR01982 1 LRRLRRIIRVLIRYGFLALVESPIGPLSLRLLRRLLLPFSNRENRLMSRGERLRLALEELGPTFIKFGQTLSTRADLLPA 80 (437)
T ss_pred CHHHHHHHHHHHHhCcHHHhhhhcccchhhhHhhhhhhhcccccccccHHHHHHHHHHHcCchhHHHhHHHHhCcccCCH
Confidence 4799999999999999987654110 0111234679999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHH
Q 011399 92 EYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGL 171 (487)
Q Consensus 92 ~~~~~l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~ 171 (487)
+|+++|++|||++||+|++++++++++++|.+++++|.+||++|||+||+||||+|+++ +|+.||||+++|++.+.+..
T Consensus 81 ~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~ 159 (437)
T TIGR01982 81 DIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAA 159 (437)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhc-ccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEee
Q 011399 172 DFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEW 250 (487)
Q Consensus 172 dl~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~ 250 (487)
|+.+++.++.++++..+. ...++..+++++...+.+|+||.+||+|+.++++.|++.+.+++|++|+++|+..+|||||
T Consensus 160 Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~ 239 (437)
T TIGR01982 160 DIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEW 239 (437)
T ss_pred HHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEe
Confidence 999999999999887653 3368899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHH
Q 011399 251 VEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHV 330 (487)
Q Consensus 251 ~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~ 330 (487)
++|+++.+.......+.+...+....+..++.++|..|++|+||||+||+++++|+++++|||+++.++++.+..+..++
T Consensus 240 i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~~r~~l~~l~ 319 (437)
T TIGR01982 240 IDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSEEDRRYLAEIL 319 (437)
T ss_pred ECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCHHHHHHHHHHH
Confidence 99999999866555566666676666777899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 011399 331 VHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (487)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (487)
.++..+|++.++..+..+|+.++..|...+...+..+++.+.+.+..+++++.++.++..+.+++.+.+|+++..+.|++
T Consensus 320 ~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~r~l 399 (437)
T TIGR01982 320 YGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIFGQPLKEISVGRLLAGLFKITRDFNMELQPQLLLLQKTL 399 (437)
T ss_pred HHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHCCccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred HHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 411 TVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 411 ~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
.++||++..+||++++.+.++||+.+.+..+.+|.
T Consensus 400 ~~leg~~~~L~p~~~~~~~~~p~~~~~~~~~~~~~ 434 (437)
T TIGR01982 400 LTVEGVGRQLDPDLNMWKVAEPFVKRWIRKRLGPK 434 (437)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcChh
Confidence 99999999999999999999999988877666654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-62 Score=502.46 Aligned_cols=293 Identities=42% Similarity=0.677 Sum_probs=277.3
Q ss_pred hhHHHHHHHHHHHhcChHHHHHHHHhhcCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCccc
Q 011399 57 KRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPI 136 (487)
Q Consensus 57 ~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p~~~~~~l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~i 136 (487)
+...+++|++++..|||+|||+||.+|||+|++|+||+++|+.|||++||+|++++.+++++|+|.+++++|++||++||
T Consensus 90 ~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~pi 169 (538)
T KOG1235|consen 90 LLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPI 169 (538)
T ss_pred HHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchh
Confidence 34556999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHH
Q 011399 137 AAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQ 216 (487)
Q Consensus 137 g~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~ 216 (487)
|++|+||||+|+++ +|+.||||||||++++.+..|+.+++.++..++++.+ +.++..+++|+.+.+.+|+||.+||+
T Consensus 170 aaASlaQVhrA~L~-~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p--~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 170 AAASLAQVHRARLK-NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFP--DFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred hhcchhheEEEEec-CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCc--CCchhhHHHHHHhhhHhhcchHHHHH
Confidence 99999999999999 7999999999999999999999999999999998876 55699999999999999999999999
Q ss_pred HHHHHHHHhCCCC---CeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 217 NARRFKKLYADKE---DVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 217 ~~~~~~~~~~~~~---~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|+++++++|++.+ .|+||+|||++|++++||||||+|..++|+..+++.+.+...+.......+..||+..|+||+|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaD 326 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHAD 326 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCC
Confidence 9999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEcC----CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 294 PHPGNLLATP----EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 294 lkp~Nili~~----~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
||||||++++ ++.+.+.|||+++.+++..|..++.++.++...|...+....-.+|...
T Consensus 327 PHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~ 389 (538)
T KOG1235|consen 327 PHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL 389 (538)
T ss_pred CCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc
Confidence 9999999994 5689999999999999999999999999999966666666666666654
|
|
| >KOG1236 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-47 Score=365.99 Aligned_cols=377 Identities=23% Similarity=0.336 Sum_probs=330.1
Q ss_pred hHHHHHHHHHHHhcChHHHHHHHHhhcCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCC-CHHhhhcccCCccc
Q 011399 58 RKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGL-TLDSIFSSISPSPI 136 (487)
Q Consensus 58 ~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p~~~~~~l~~lqd~~~~~~~~~~~~~i~~~lg~-~~~~~f~~~~~~~i 136 (487)
.-.-+-|+.++|..||+|||+||+.|||+|+|++++|++|++|+.+++|.++..-++.+..++|. .++++|.+|++.||
T Consensus 118 ~lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PI 197 (565)
T KOG1236|consen 118 TLWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPI 197 (565)
T ss_pred HHHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCccc
Confidence 34567889999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred ccccccEEEEEEEc---------------cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 137 AAASLGQVYKAQLK---------------YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 137 g~Gs~gqV~~a~~~---------------~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
|+|+++|||+|+.+ .+.+.+|||+.+|+++..+..|+.+|+..+++.+......-.++...++.|
T Consensus 198 GsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF 277 (565)
T KOG1236|consen 198 GSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQF 277 (565)
T ss_pred ccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHH
Confidence 99999999999764 123689999999999999999999999999998865555556777888899
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH-HHHHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV-LDLVNTGIQCS 280 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~-~~~~~~~i~~~ 280 (487)
.-.+...+|..+||.++.+|..+|+....+.+|+++..+.++.+|+-+|..|.++.....-.+.+... .++...++.+.
T Consensus 278 ~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~Al 357 (565)
T KOG1236|consen 278 SVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNAL 357 (565)
T ss_pred HHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988775444333212 33444556667
Q ss_pred HHHHHHCCccccCCCCCCeEEcCC-------------------------------------------CcEEEEecCCCCC
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPE-------------------------------------------GKLAFLDFGMMSE 317 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~-------------------------------------------g~i~l~DFGla~~ 317 (487)
++++...+++|+|+|||||++..+ -+++++|-|++..
T Consensus 358 lkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv~k 437 (565)
T KOG1236|consen 358 LKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIVTK 437 (565)
T ss_pred HHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchhhhc
Confidence 888999999999999999999632 3489999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc-cCCCCcCcHHHHHHHHHHHHhhCC
Q 011399 318 TPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL-NSSVSELNFKTIVDGLGAVLYQYP 396 (487)
Q Consensus 318 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~ 396 (487)
+++..+.++.+++.+++..+.......+....-...-+|...+...++++++... .......+.++++.++..+.++|.
T Consensus 438 Ls~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~st~sl~tl~i~~ll~em~tmvreH~ 517 (565)
T KOG1236|consen 438 LSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARSTKSLRTLNIGDLLSEMFTMVREHH 517 (565)
T ss_pred cChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhhhcccCcCcHHHHHHHHHHHHHHhh
Confidence 9999999999999999998888777777666655566788889899999988766 445667789999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHH
Q 011399 397 FNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYF 434 (487)
Q Consensus 397 ~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~ 434 (487)
.++..+++..+-+.+.+||.++++||+++++....+++
T Consensus 518 V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l 555 (565)
T KOG1236|consen 518 VRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLL 555 (565)
T ss_pred eeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHH
Confidence 99999999999999999999999999999988544443
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=277.96 Aligned_cols=279 Identities=19% Similarity=0.161 Sum_probs=198.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..+|+||+|.|++|+++.||+.||||.....-.+. .+-+...+.+..+.++.|+|++.+++.|+..
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~-----~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk--------- 73 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDP-----VVKKIALREIRMLKQLKHENLVNLIEVFRRK--------- 73 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCccH-----HHHHHHHHHHHHHHhcccchHHHHHHHHHhc---------
Confidence 46999999999999999999999999986432211 1111112222223345699999999998755
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
...+||.|||+..-|.++.. ...|.+. .+-+..|+..++.|+|+++++|
T Consensus 74 ----------------------------rklhLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IH 124 (396)
T KOG0593|consen 74 ----------------------------RKLHLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNNCIH 124 (396)
T ss_pred ----------------------------ceeEEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcCeec
Confidence 56679999999876666533 3345544 4455678888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+||||+.+|.+||||||+|+.+.. .-..+++.+.+.|++.||.+..+. -+++.+|+|++||.+.|++++-
T Consensus 125 RDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~YTDYVATRWYRaPELLvGDt----qYG~pVDiWAiGCv~aEl~~G~ 199 (396)
T KOG0593|consen 125 RDIKPENILITQNGVVKLCDFGFARTLSA-PGDNYTDYVATRWYRAPELLVGDT----QYGKPVDIWAIGCVFAELLTGE 199 (396)
T ss_pred ccCChhheEEecCCcEEeccchhhHhhcC-CcchhhhhhhhhhccChhhhcccC----cCCCcccchhhhHHHHHHhcCC
Confidence 99999999999999999999999999974 224578888999999999875432 2378999999999999999742
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
|+- .-.++++.+..+..... .++|....++.+.-..-|+...--++...++ +... ..++.+-+.+.
T Consensus 200 ---pL~--PG~SDiDQLy~I~ktLG-~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe-------~k~p-~~s~~~ld~~k 265 (396)
T KOG0593|consen 200 ---PLW--PGRSDIDQLYLIRKTLG-NLIPRHQSIFSSNPFFHGVRLPEPEHPEPLE-------RKYP-KISNVLLDLLK 265 (396)
T ss_pred ---cCC--CCcchHHHHHHHHHHHc-ccCHHHHHHhccCCceeeeecCCCCCccchh-------hhcc-cchHHHHHHHH
Confidence 211 11234444444333322 3455555566555444555433222222222 2222 34667889999
Q ss_pred HHHhhcCcccccccchhhccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.||..||..||+-.+.+-|+|||
T Consensus 266 ~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 266 KCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred HHhcCCccccccHHHHhcChHHH
Confidence 99999999999999999999994
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=295.46 Aligned_cols=293 Identities=19% Similarity=0.197 Sum_probs=214.1
Q ss_pred hCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC-----hHHHHHHHHHHHHHHHHHHhhhhhcccCCH
Q 011399 120 LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-----IEEAIGLDFYLIRGVGFLINKYVDIITTDV 194 (487)
Q Consensus 120 lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-----~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i 194 (487)
++....+.|+.+ +.||+|.||+||+|++..+|+.||+|.++-+ ....+.+++.+||.+ .|+|+
T Consensus 111 w~~r~~~~feki--~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l----------~HpNI 178 (560)
T KOG0600|consen 111 WGPRRADSFEKI--EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL----------DHPNI 178 (560)
T ss_pred ccccchHHHHHH--HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc----------CCCcc
Confidence 344455677777 6799999999999999999999999999743 334455566665544 38888
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH--hcCCCHHHH
Q 011399 195 VALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE--SQGLKVLDL 272 (487)
Q Consensus 195 ~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~--~~~~~~~~~ 272 (487)
+.+.+.+ +...++..|||.|||+. +|..+.... +...+..+.
T Consensus 179 ikL~eiv-----------------------------------t~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc 222 (560)
T KOG0600|consen 179 IKLEEIV-----------------------------------TSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKC 222 (560)
T ss_pred cceeeEE-----------------------------------EecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHH
Confidence 8776532 12245778999999987 676664332 334566788
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
++.|+..||+|||..||+|||||..||||+.+|.+||+|||+|+.++.+....+++-+.++||+.||.+..+ --++
T Consensus 223 ~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~----t~Yg 298 (560)
T KOG0600|consen 223 YMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGA----TSYG 298 (560)
T ss_pred HHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCC----cccc
Confidence 899999999999999999999999999999999999999999998888877778888899999999987321 1247
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhH
Q 011399 353 PDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYP 432 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p 432 (487)
+.+|+||.||.+.|++.+- .-+.+.+--.-+..|.++| ....+.++. . .--|.+......+|
T Consensus 299 ~aVDlWS~GCIl~El~~gk--PI~~G~tEveQl~kIfklc---GSP~e~~W~--~-----------~kLP~~~~~kp~~~ 360 (560)
T KOG0600|consen 299 TAVDLWSVGCILAELFLGK--PILQGRTEVEQLHKIFKLC---GSPTEDYWP--V-----------SKLPHATIFKPQQP 360 (560)
T ss_pred cceeehhhhHHHHHHHcCC--CCcCCccHHHHHHHHHHHh---CCCChhccc--c-----------ccCCcccccCCCCc
Confidence 8899999999999999742 1122221111122333332 111111111 0 11144444444444
Q ss_pred H---HHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccccccc
Q 011399 433 Y---FAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCDIS 483 (487)
Q Consensus 433 ~---~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~~ 483 (487)
| +.+. ....++..-+++..+|..||.+|.++.+++.+.||..++.+||-+
T Consensus 361 y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~ 413 (560)
T KOG0600|consen 361 YKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPS 413 (560)
T ss_pred ccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcc
Confidence 3 3333 457889999999999999999999999999999999999999854
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=286.64 Aligned_cols=250 Identities=20% Similarity=0.249 Sum_probs=177.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||+|+-|.||+++++.||+.+|+|+++-+.. .++++++.+|+++++
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~--------------------------------~~~~~Qi~rEl~il~ 132 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNID--------------------------------PALQKQILRELEILR 132 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCC--------------------------------HHHHHHHHHHHHHHh
Confidence 579999999999999999999999999953322 233455556665555
Q ss_pred HHH--HHHHHHHHhCCCCCeEeceeeecCCC-CceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHH-CC
Q 011399 214 EGQ--NARRFKKLYADKEDVLVPDIFWDYTS-GKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLE-YG 288 (487)
Q Consensus 214 Ea~--~~~~~~~~~~~~~~v~vP~v~~~~~~-~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~-~g 288 (487)
+.. ++..|+..| . ... ...|+||||+||+|+++... ...++.....+..++..||.|||+ ++
T Consensus 133 ~~~spyIV~~ygaF------------~-~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~ 199 (364)
T KOG0581|consen 133 SCQSPYIVGFYGAF------------Y-SNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERK 199 (364)
T ss_pred hCCCCCeeeEeEEE------------E-eCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 431 111111111 1 112 46799999999999987432 223445556667888999999995 99
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
|+|||+||.|||++..|+|||+|||.++.+......++.|+. .|..||++... -.+...||||||..+.|+.
T Consensus 200 IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~---~YMsPERi~g~-----~Ys~~sDIWSLGLsllE~a 271 (364)
T KOG0581|consen 200 IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTS---AYMSPERISGE-----SYSVKSDIWSLGLSLLELA 271 (364)
T ss_pred eeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccc---cccChhhhcCC-----cCCcccceecccHHHHHHh
Confidence 999999999999999999999999999999877656666654 34456665433 3477799999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
.+.++.+...-.....++-+..++.+.+..+|.. ..+|+++.
T Consensus 272 ~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~--------------------------------------~fS~ef~~ 313 (364)
T KOG0581|consen 272 IGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG--------------------------------------EFSPEFRS 313 (364)
T ss_pred hCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc--------------------------------------cCCHHHHH
Confidence 8766544431111112222223332222222211 36899999
Q ss_pred HHHHHHhhcCcccccccchhhccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
++..||+|||+.||+..+-+.|+|+.
T Consensus 314 FV~~CL~Kdp~~R~s~~qLl~Hpfi~ 339 (364)
T KOG0581|consen 314 FVSCCLRKDPSERPSAKQLLQHPFIK 339 (364)
T ss_pred HHHHHhcCCcccCCCHHHHhcCHHHh
Confidence 99999999999999999999999983
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-34 Score=274.30 Aligned_cols=197 Identities=19% Similarity=0.207 Sum_probs=153.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCC-----hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-----IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-----~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+||||.||+|+++.+|..||||.+... ..+....++++|+.+ .|+|++.+++.+.
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel----------~H~nIV~l~d~~~------ 79 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL----------KHPNIVRLLDCIE------ 79 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc----------CCcceeeEEEEEe------
Confidence 5599999999999999999999999998654 233333444444433 2677666665322
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
..+..|||||||+||+|++++..+ ..+++..+....|+..|+++||++
T Consensus 80 -------------------------------~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~ 128 (429)
T KOG0595|consen 80 -------------------------------DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN 128 (429)
T ss_pred -------------------------------cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 235668999999999999997654 455677788889999999999999
Q ss_pred CccccCCCCCCeEEcCC------CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 288 GYFHADPHPGNLLATPE------GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 288 givH~Dlkp~Nili~~~------g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
+|+|||+||+|||++.. -.+||+|||+++.+.+.. +...+.++|-+|+++++..+-++.++|+||+|
T Consensus 129 ~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~-------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG 201 (429)
T KOG0595|consen 129 NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS-------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIG 201 (429)
T ss_pred CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh-------HHHHhhCCccccCHHHHHhccccchhhHHHHH
Confidence 99999999999999864 348999999999998652 22344556777788888788889999999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHH
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVD 386 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~ 386 (487)
+.+++++++. .|++.-+..++.-
T Consensus 202 ~Ilyq~l~g~--~Pf~a~t~~eL~~ 224 (429)
T KOG0595|consen 202 TILYQCLTGK--PPFDAETPKELLL 224 (429)
T ss_pred HHHHHHHhCC--CCccccCHHHHHH
Confidence 9999999854 5666666665553
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=259.42 Aligned_cols=283 Identities=19% Similarity=0.208 Sum_probs=197.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.+|+|.||.||+|++..+|+.||||.++.+..+. ..+...+|++..+. ...|+|+++++|.|-..
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lq----el~h~nIi~LiD~F~~~--------- 73 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQ----ELKHPNIIELIDVFPHK--------- 73 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHH----HccCcchhhhhhhccCC---------
Confidence 67999999999999999999999999998662221 12334444444333 22378888888765422
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH 291 (487)
+...||.||++. +|..+++.+..-+.+. +.+..++..|+.|||++.|+|
T Consensus 74 ----------------------------~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlH 124 (318)
T KOG0659|consen 74 ----------------------------SNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILH 124 (318)
T ss_pred ----------------------------CceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 455699999986 7766654444444443 345567778999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||.|+|++++|.+|++|||+++.+.+..+... ..+.+.|++.||.+-. .--++..+|+||.||.+.|++.+.
T Consensus 125 RDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~-~~V~TRWYRAPELLfG----sr~Yg~~VDmWavGCI~AELllr~ 199 (318)
T KOG0659|consen 125 RDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT-HQVVTRWYRAPELLFG----SRQYGTGVDMWAVGCIFAELLLRV 199 (318)
T ss_pred ccCCccceEEcCCCcEEeecccchhccCCCCcccc-cceeeeeccChHHhcc----chhcCCcchhhhHHHHHHHHHccC
Confidence 99999999999999999999999999876544322 2267889999997621 112378899999999999998632
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHh-HhHHHHHHhccCCCHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA-SYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~-~~p~~~~~l~~~~~p~~r~~l 450 (487)
|+-. -.++++++..+.+......|..+..+. ++ |++.-+.. -.|- ...++...+.++-+.+
T Consensus 200 ---P~fp--G~sDidQL~~If~~LGTP~~~~WP~~~-~l-----------pdY~~~~~~P~~~-~~~lf~aas~d~ldLl 261 (318)
T KOG0659|consen 200 ---PFFP--GDSDIDQLSKIFRALGTPTPDQWPEMT-SL-----------PDYVKIQQFPKPP-LNNLFPAASSDALDLL 261 (318)
T ss_pred ---CCCC--CCchHHHHHHHHHHcCCCCcccCcccc-cc-----------ccHHHHhcCCCCc-cccccccccHHHHHHH
Confidence 2111 123566677776665555443332111 11 33332221 1111 1225556788889999
Q ss_pred HHHHhhcCcccccccchhhccccccccccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVDFEFVVCDI 482 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~ 482 (487)
..++..||.+||+..+++.|+||.--+.|.+.
T Consensus 262 ~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~ 293 (318)
T KOG0659|consen 262 SKMLTYNPKKRITASQALKHPYFKSLPLPTPP 293 (318)
T ss_pred HhhhccCchhcccHHHHhcchhhhcCCCCCCh
Confidence 99999999999999999999999877777653
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=280.05 Aligned_cols=263 Identities=18% Similarity=0.169 Sum_probs=179.6
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.+.+|+|+||.|-+|..+.||+.||||++.................+.+..+.+..+.||+++++.+-|..
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~--------- 247 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV--------- 247 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec---------
Confidence 37899999999999999999999999999643211111011111112222222233347777766664331
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
....||||||++||+|.+.... ...+.+..+.+..|++.|+.|||+.||+|
T Consensus 248 ----------------------------~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~H 299 (475)
T KOG0615|consen 248 ----------------------------PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIH 299 (475)
T ss_pred ----------------------------CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCccc
Confidence 2344899999999999886433 34567788899999999999999999999
Q ss_pred cCCCCCCeEEcCC---CcEEEEecCCCCCCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcchHHHHHH
Q 011399 292 ADPHPGNLLATPE---GKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALD--FLSPDVDVTPIVPALR 365 (487)
Q Consensus 292 ~Dlkp~Nili~~~---g~i~l~DFGla~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~Di~sl~~~l~ 365 (487)
|||||+|||++.+ -.+||.|||+|+...+. ...++||+..+. .||.++ +-| +...++|+||+||.++
T Consensus 300 RDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYv---APEVl~----~kg~~~~~~kVDiWSlGcvLf 372 (475)
T KOG0615|consen 300 RDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYV---APEVLA----SKGVEYYPSKVDIWSLGCVLF 372 (475)
T ss_pred ccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCcccc---Chhhee----cCCeecccchheeeeccceEE
Confidence 9999999999866 56999999999988643 445566653332 233332 222 2234789999999999
Q ss_pred HHHHHhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 366 NFFDDALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
-+++++. |+++.. -..+.+.++..-| ++.-|. ..+.+.
T Consensus 373 vcLsG~p--PFS~~~~~~sl~eQI~~G~y--~f~p~~-------------------------------------w~~Ise 411 (475)
T KOG0615|consen 373 VCLSGYP--PFSEEYTDPSLKEQILKGRY--AFGPLQ-------------------------------------WDRISE 411 (475)
T ss_pred EEeccCC--CcccccCCccHHHHHhcCcc--cccChh-------------------------------------hhhhhH
Confidence 9888663 443322 1223334433221 222111 113467
Q ss_pred HHHHHHHHHHhhcCcccccccchhhccccccccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVC 480 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~ 480 (487)
+.++.+..||..||+.|.+.-+++.||||...++.-
T Consensus 412 ea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~s 447 (475)
T KOG0615|consen 412 EALDLINWMLVVDPENRPSADEALNHPWFKDAPCLS 447 (475)
T ss_pred HHHHHHHHhhEeCcccCcCHHHHhcChhhhcccccc
Confidence 788999999999999999999999999998776543
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=271.67 Aligned_cols=285 Identities=17% Similarity=0.189 Sum_probs=203.6
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcc-cCCHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDII-TTDVVALIDEFAS 203 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 203 (487)
.+.|..+ +.||.|+||.||+|+.+.+|..||||.++..... ..|.-.||++..+. .+. |+|++.+.+.+.+
T Consensus 9 m~RY~~i--~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~ee~~nLREvksL~----kln~hpniikL~Evi~d 80 (538)
T KOG0661|consen 9 MDRYTVI--RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--WEECMNLREVKSLR----KLNPHPNIIKLKEVIRD 80 (538)
T ss_pred HHHHHHH--HHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--HHHHHHHHHHHHHH----hcCCCCcchhhHHHhhc
Confidence 3445555 6799999999999999999999999988755433 34555666665544 333 8999998887654
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSL 281 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~l 281 (487)
. .+..++|||||+. .|.++...+...+ ...+-+..||..+|
T Consensus 81 ~------------------------------------~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL 123 (538)
T KOG0661|consen 81 N------------------------------------DRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGL 123 (538)
T ss_pred c------------------------------------CceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHH
Confidence 3 1256799999987 7777655443333 34556678899999
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
+|+|.+||||||+||+|||+.....|||+|||+|+.+.... .++..+-+.||+.||.+. .-|+++.++|+|++|
T Consensus 124 ~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp--PYTeYVSTRWYRAPEvLL----rs~~Ys~pvD~wA~G 197 (538)
T KOG0661|consen 124 AHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP--PYTEYVSTRWYRAPEVLL----RSGYYSSPVDMWAVG 197 (538)
T ss_pred HHHHhcCcccccCChhheEecccceeEecccccccccccCC--CcchhhhcccccchHHhh----hccccCCchHHHHHH
Confidence 99999999999999999999988899999999999986553 356777789999999864 578889999999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
|.++|+.. +..-+.+.+--+-++.+..++-.-.-..-++-..+.+++ ..--|.+. |.-...++.+
T Consensus 198 cI~aEl~s--LrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~m-------nf~~P~~~------~~~l~~L~p~ 262 (538)
T KOG0661|consen 198 CIMAELYS--LRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAM-------NFRFPQVK------PSPLKDLLPN 262 (538)
T ss_pred HHHHHHHH--hcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHh-------ccCCCcCC------CCChHHhCcc
Confidence 99999886 222233333223344555544321111112222222222 11112221 2223455556
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.+++.-..+.+||.-||.+|.++.+++.|+||..
T Consensus 263 ~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~ 296 (538)
T KOG0661|consen 263 ASSEAASLIERLLAWDPDKRPTASQALQHPFFQV 296 (538)
T ss_pred cCHHHHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence 8899999999999999999999999999999965
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-33 Score=265.51 Aligned_cols=285 Identities=18% Similarity=0.156 Sum_probs=191.3
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.++||.|++|.|..|.++.+|+.||||.+..-....+ .-.+.+|++.- +....|.|++.+.+.+..
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~-~akRtlRElkl----Lr~~~HeNIi~l~di~~p--------- 92 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQI-DAKRTLRELKL----LRHLRHENIIGLLDIFRP--------- 92 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchH-HHHHHHHHHHH----HHHhcCCCcceEEeeccc---------
Confidence 3889999999999999999999999998862222111 00111122111 112237777766664432
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
.... --...|+|+|+|+ .+|..++..+. ...+..+....|+..|++|+|+.|++|
T Consensus 93 ----------------------~~~~-~f~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViH 148 (359)
T KOG0660|consen 93 ----------------------PSRD-KFNDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIH 148 (359)
T ss_pred ----------------------cccc-ccceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccc
Confidence 1110 1145689999994 47877755444 445667888899999999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHH-HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEA-RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||+||+|++++.+..+|++|||+|+..++.. ...+++.+.+.|+++||.+. +..-.+..+|+||+||.+.||+++
T Consensus 149 RDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll----~~~~Yt~aiDiWSvGCI~AEmL~g 224 (359)
T KOG0660|consen 149 RDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLL----NSSEYTKAIDIWSVGCILAEMLTG 224 (359)
T ss_pred cccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHh----ccccccchhhhhhhhHHHHHHHcC
Confidence 9999999999999999999999999986432 23357788889999999873 344458899999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
---.+.. + -+.++..++.-.+.. +++...-+++-..-. ...++ |.. ...|| ..++...+|.+.+.+
T Consensus 225 kplFpG~--d---~v~Ql~lI~~~lGtP-~~e~l~~i~s~~ar~-yi~sl-p~~----p~~~f--~~~fp~a~p~AidLl 290 (359)
T KOG0660|consen 225 KPLFPGK--D---YVHQLQLILELLGTP-SEEDLQKIRSEKARP-YIKSL-PQI----PKQPF--SSIFPNANPLAIDLL 290 (359)
T ss_pred CCCCCCC--c---hHHHHHHHHHhcCCC-CHHHHHHhccHHHHH-HHHhC-CCC----CCCCH--HHHcCCCCHHHHHHH
Confidence 3222222 2 233444444333333 233222222111101 11111 211 11233 234458899999999
Q ss_pred HHHHhhcCcccccccchhhcccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
++||.-||.+|.+..+++.|||+
T Consensus 291 ekmL~fdP~kRita~eAL~hPYl 313 (359)
T KOG0660|consen 291 EKMLVFDPKKRITAEEALAHPYL 313 (359)
T ss_pred HHHhccCccccCCHHHHhcChhh
Confidence 99999999999999999999998
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-32 Score=258.82 Aligned_cols=289 Identities=21% Similarity=0.204 Sum_probs=191.9
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+-+ +.|++|+||.||+|+++.|++.||+|.++...... .--+..+|++..++ ..+|+||+++-+..
T Consensus 78 fe~l--nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-GFPItsLREIniLl----~~~H~NIV~vkEVV------ 144 (419)
T KOG0663|consen 78 FEKL--NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-GFPITSLREINILL----KARHPNIVEVKEVV------ 144 (419)
T ss_pred HHHH--hhcccCcceeEEEeccCCcceeEEeeecccccccC-CCcchhHHHHHHHH----hcCCCCeeeeEEEE------
Confidence 5555 67999999999999999999999999998664221 12233344444333 22366655543311
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh 285 (487)
+..--+..|||||||+. +|..+...-. ......+.+..|+..|++|||
T Consensus 145 -----------------------------vG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH 194 (419)
T KOG0663|consen 145 -----------------------------VGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH 194 (419)
T ss_pred -----------------------------eccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh
Confidence 11112457899999987 6655533322 234566788899999999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
.+.|+|||+||+|+|+++.|.+|++|||+|+.+... ...++..+.++||+.||.+.. .-.++..+|+||+||.+.
T Consensus 195 ~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~k~~T~lVVTLWYRaPELLLG----~~tyst~iDMWSvGCI~a 269 (419)
T KOG0663|consen 195 DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-LKPYTPLVVTLWYRAPELLLG----AKTYSTAVDMWSVGCIFA 269 (419)
T ss_pred hceeEecccchhheeeccCCcEEecccchhhhhcCC-cccCcceEEEeeecCHHHhcC----CcccCcchhhhhHHHHHH
Confidence 999999999999999999999999999999998755 334677888999999998632 223488899999999999
Q ss_pred HHHHHh--ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCC-hHHhHhHHH--HHHhc-
Q 011399 366 NFFDDA--LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFK-VLAASYPYF--AKRLL- 439 (487)
Q Consensus 366 ~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~-~~~~~~p~~--~~~l~- 439 (487)
|++... ++...+-.....++..+|..... .+|.+..+ |..+ +.-..+||. .....
T Consensus 270 E~l~~kPlf~G~sE~dQl~~If~llGtPte~---iwpg~~~l----------------p~~k~~~f~~~pyn~lr~kF~~ 330 (419)
T KOG0663|consen 270 ELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA---IWPGYSEL----------------PAVKKMTFSEHPYNNLRKKFGA 330 (419)
T ss_pred HHHhcCCCCCCCchHHHHHHHHHHhCCCccc---cCCCcccc----------------chhhccccCCCCchhhhhhccc
Confidence 999632 21111111122222222211110 12211110 1110 111112221 11111
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCDIS 483 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~~ 483 (487)
...|....+.+..+|..||.+|.++.+++.|.||...+.|+|=.
T Consensus 331 ~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~ 374 (419)
T KOG0663|consen 331 LSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPS 374 (419)
T ss_pred cccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChh
Confidence 12568889999999999999999999999999999999998743
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-32 Score=271.97 Aligned_cols=253 Identities=17% Similarity=0.203 Sum_probs=174.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|||++|++|+.+.+++.|||||..+.. + +| .+-+.. ..+
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~---I------ik--------------e~KvkY-------------V~~ 122 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRY---I------IK--------------EKKVKY-------------VTR 122 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHH---H------Hh--------------hcccch-------------hhH
Confidence 55999999999999999999999999975320 0 00 000000 011
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|-..+.++ .+++.|. +.|. +-....|.|+||+++|+|.+++. .....+...+.+..+|..+++|||++|||
T Consensus 123 Ek~~l~~L----~~hPgiv--kLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GII 196 (604)
T KOG0592|consen 123 EKEALTQL----SGHPGIV--KLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGII 196 (604)
T ss_pred HHHHHHHh----hCCCCeE--EEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCce
Confidence 22222222 2344432 3333 33466799999999999988743 23344667889999999999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH-------HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-------IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
|||+||+|||++.||+++|.|||.|+.+++.....- ...-..-+-+..+++.+++..-+.+++..|+|+|||.
T Consensus 197 HRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCi 276 (604)
T KOG0592|consen 197 HRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCI 276 (604)
T ss_pred eccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHH
Confidence 999999999999999999999999999987643200 0000011223355566677778889999999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
++.|+.+ ..|+.+.+--.++..+..+-|.++.+.|
T Consensus 277 lyQmlaG--~PPFra~NeyliFqkI~~l~y~fp~~fp------------------------------------------- 311 (604)
T KOG0592|consen 277 LYQMLAG--QPPFRAANEYLIFQKIQALDYEFPEGFP------------------------------------------- 311 (604)
T ss_pred HHHHhcC--CCCCccccHHHHHHHHHHhcccCCCCCC-------------------------------------------
Confidence 9999984 3577766655666666666665554444
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+..++.++++|..||+.|.+.-+-..|+||
T Consensus 312 ~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF 341 (604)
T KOG0592|consen 312 EDARDLIKKLLVRDPSDRLTSQQIKAHPFF 341 (604)
T ss_pred HHHHHHHHHHHccCccccccHHHHhhCccc
Confidence 445566666677777777776666666666
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-34 Score=273.36 Aligned_cols=278 Identities=19% Similarity=0.181 Sum_probs=192.0
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.+.+|+||||.||+|....+++.||||..-++.+ --..++.+|+.+ .|+|++.+.-.|..+... |
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-~knrEl~im~~l----------~HpNIV~L~~~f~~~~~~--d-- 93 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-YKNRELQIMRKL----------DHPNIVRLLYFFSSSTES--D-- 93 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCC-cCcHHHHHHHhc----------CCcCeeeEEEEEEecCCC--c--
Confidence 4789999999999999998999999999876643 235677777633 388888887654433111 0
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-----HhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-----ESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
+ -...|||||++. +|.+..+. .+...-..+++.+|+..|+.|||+.
T Consensus 94 -------~---------------------~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~ 144 (364)
T KOG0658|consen 94 -------E---------------------VYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH 144 (364)
T ss_pred -------h---------------------hHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence 0 012389999986 66665442 1223345689999999999999999
Q ss_pred CccccCCCCCCeEEcCC-CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~~~-g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
||+||||||+|+|++++ |.+||+|||.|+.+...+.. .....+..++.||.+.. .-.++..+|+||.||.+.|
T Consensus 145 ~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn--iSYicSRyYRaPELifg----a~~Yt~~IDiWSaGCV~aE 218 (364)
T KOG0658|consen 145 GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN--ISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVMAE 218 (364)
T ss_pred CcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc--eeEEEeccccCHHHHcC----ccccCceeEEhhhhHHHHH
Confidence 99999999999999976 99999999999998766543 44556778888887632 1124788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCC---CChHHhHhHHHHHHhccCCC
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPN---FKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~---~~~~~~~~p~~~~~l~~~~~ 443 (487)
++-+.- -+.+.+-..-+..+.++ ++.|.. ..+++ .+|+ +...........+......+
T Consensus 219 Ll~g~p--lFpG~s~~dQL~eIik~-----lG~Pt~--e~I~~----------mn~~y~~~~~p~ik~~~~~~~~~~~~~ 279 (364)
T KOG0658|consen 219 LLKGQP--LFPGDSSVDQLVEIIKV-----LGTPTR--EDIKS----------MNPNYTEFKFPQIKAHPWHKVFFKRLP 279 (364)
T ss_pred HhcCCc--ccCCCCHHHHHHHHHHH-----hCCCCH--HHHhh----------cCcccccccCcccccccceeecccCCC
Confidence 996421 12222322222222222 244433 11111 2222 11111111122233455789
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
|++-+.+.++|..+|++|.+..+++.|++||.-..+
T Consensus 280 ~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 280 PDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 999999999999999999999999999999876555
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-32 Score=273.43 Aligned_cols=253 Identities=16% Similarity=0.171 Sum_probs=183.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecC------ChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRP------GIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p------~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
+-||+|+|+.||.++...+|+.||+|++.. +.++.+..++++-+ .+.|+||+++++.|++.
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr----------~L~HpnIV~f~~~FEDs--- 90 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHR----------SLKHPNIVQFYHFFEDS--- 90 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHH----------hcCCCcEEeeeeEeecC---
Confidence 679999999999999977999999999853 34444444444433 33477777776654432
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
+..|||.|+|+.++|..+... +...++..+.+.+||..|+.|||+
T Consensus 91 ----------------------------------~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~ 136 (592)
T KOG0575|consen 91 ----------------------------------NNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHS 136 (592)
T ss_pred ----------------------------------CceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 555799999999999988553 234467788899999999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE--EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
+||+|||||-||+|++++.+|||+|||+|..+.. +.+.++||+ |.++++++..-.--+.++|+||+||.|
T Consensus 137 ~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGT--------PNYIAPEVl~k~gHsfEvDiWSlGcvm 208 (592)
T KOG0575|consen 137 LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGT--------PNYIAPEVLNKSGHSFEVDIWSLGCVM 208 (592)
T ss_pred cCceecccchhheeecCcCcEEecccceeeeecCcccccceecCC--------CcccChhHhccCCCCCchhhhhhhhHH
Confidence 9999999999999999999999999999999863 345667777 444444444333336677888877777
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
|.++. ..+|++..+++.....+-.. .+.+| ...++
T Consensus 209 YtLL~--G~PPFetk~vkety~~Ik~~----~Y~~P---------------------------------------~~ls~ 243 (592)
T KOG0575|consen 209 YTLLV--GRPPFETKTVKETYNKIKLN----EYSMP---------------------------------------SHLSA 243 (592)
T ss_pred Hhhhh--CCCCcccchHHHHHHHHHhc----Ccccc---------------------------------------cccCH
Confidence 77765 23455555554444333221 11111 13467
Q ss_pred HHHHHHHHHHhhcCcccccccchhhccccccccccccccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCDISIRG 486 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (487)
++++.+.++|..||..|.+.-+.+.|+||.-.+.|--+....
T Consensus 244 ~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~lp~~~ 285 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPARLPSSC 285 (592)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCCCCCccc
Confidence 888899999999999999999999999996666665444433
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=257.46 Aligned_cols=286 Identities=21% Similarity=0.238 Sum_probs=183.9
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChH-----HHHHHHHHHHHHHHHHHhhhhhcccCC-HHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE-----EAIGLDFYLIRGVGFLINKYVDIITTD-VVALID 199 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~-----~~~~~dl~~l~~~~~~~~~~~~~~~~~-i~~~~~ 199 (487)
+.|+.+ +.||+|+||.||+|+.+.+|+.||+|+++-... ....+++.+++.+. |.+ ++.+.+
T Consensus 11 ~~~~~~--eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~----------~~~~iv~L~d 78 (323)
T KOG0594|consen 11 FDYEKV--EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLS----------HANHIVRLHD 78 (323)
T ss_pred HHHHHH--HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhC----------CCcceEEEEe
Confidence 335555 559999999999999999999999999984422 12223333333222 333 333333
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCC--HHHHHH
Q 011399 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLK--VLDLVN 274 (487)
Q Consensus 200 ~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~--~~~~~~ 274 (487)
.+... .. ....+..+||+||++- +|.++..... .+.+ ..+.+.
T Consensus 79 v~~~~------------------------~~-------~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m 126 (323)
T KOG0594|consen 79 VIHTS------------------------NN-------HRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFM 126 (323)
T ss_pred eeeec------------------------cc-------ccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHH
Confidence 22111 00 0011356799999976 7766644332 3455 366778
Q ss_pred HHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 011399 275 TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (487)
Q Consensus 275 ~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (487)
.|+..|+.|||++||+|||+||+||||+++|.+||+|||+++...-..+ .+..-+.+++++.||.+.. .-.+++.
T Consensus 127 ~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~-~yt~evvTlWYRaPEvLlG----s~~Ys~~ 201 (323)
T KOG0594|consen 127 RQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR-TYTPEVVTLWYRAPEVLLG----STSYSTS 201 (323)
T ss_pred HHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc-cccccEEEeeccCHHHhcC----CCcCCCC
Confidence 9999999999999999999999999999999999999999996653322 2455567788999998532 2235889
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCCh----HHhH
Q 011399 355 VDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV----LAAS 430 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~----~~~~ 430 (487)
+|+||+||.+.||++.. .-+.+.+- +..+..+..... .|.+ ..-.|+. .-|+++. ....
T Consensus 202 vDiWs~GcIfaEm~~~~--~LFpG~se---~~ql~~If~~lG--tP~e--------~~Wp~v~--~~~~~k~~f~~~~~~ 264 (323)
T KOG0594|consen 202 VDIWSLGCIFAEMFTRR--PLFPGDSE---IDQLFRIFRLLG--TPNE--------KDWPGVS--SLPDYKAPFPKWPGP 264 (323)
T ss_pred cchHhHHHHHHHHHhCC--CCCCCCcH---HHHHHHHHHHcC--CCCc--------cCCCCcc--ccccccccCcCCCCc
Confidence 99999999999999832 11222222 233333333221 2211 0000110 1133322 1111
Q ss_pred hHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 431 YPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 431 ~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
+++ .......+++..+.+.++|+.+|..|.++..++.|+||+....+
T Consensus 265 ~~l--~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 265 KDL--SSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred cch--HHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 222 12233456899999999999999999999999999999765443
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=257.67 Aligned_cols=251 Identities=21% Similarity=0.202 Sum_probs=172.2
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+-. +.||+||||+|+.++.+.+|+.+|+|++++..--. ..+.+.++....++++ ..||.++.+.-.|+
T Consensus 27 F~~l--kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~-~~e~~~~~~Er~IL~~---v~hPFiv~l~ysFQ----- 95 (357)
T KOG0598|consen 27 FEIL--KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVE-KKEVRHTKAERNILSK---IKHPFIVKLIYSFQ----- 95 (357)
T ss_pred eeee--eeeeccCCceEEEEEEcccCceeehhhhhhhHhhh-hhhHHHHHHHHHHHHh---CCCCcEeeeEEecc-----
Confidence 4444 78999999999999999999999999997431110 0122222222222211 23444444433332
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
-.+..|||+||+.||.|...+.. ....++..+++...|.+||.|||+
T Consensus 96 --------------------------------t~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~ 143 (357)
T KOG0598|consen 96 --------------------------------TEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHS 143 (357)
T ss_pred --------------------------------cCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHh
Confidence 23667999999999999766432 345577788999999999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
.||+|||+||+|||++.+|+++|+|||+++..-.. ...++|| .+++||+++..-.-.+..+|.||+|+.+
T Consensus 144 ~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcG--------T~eYmAPEil~~~gy~~~vDWWsLGill 215 (357)
T KOG0598|consen 144 KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCG--------TPEYMAPEILLGKGYDKAVDWWSLGILL 215 (357)
T ss_pred CCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccC--------CccccChHHHhcCCCCcccchHhHHHHH
Confidence 99999999999999999999999999999954222 2233444 4777888777666668899999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++|+.+. .|+...+.....+.+... +...|| .-.++
T Consensus 216 YeML~G~--pPF~~~~~~~~~~~I~~~----k~~~~p--------------------------------------~~ls~ 251 (357)
T KOG0598|consen 216 YEMLTGK--PPFYAEDVKKMYDKILKG----KLPLPP--------------------------------------GYLSE 251 (357)
T ss_pred HHHhhCC--CCCcCccHHHHHHHHhcC----cCCCCC--------------------------------------ccCCH
Confidence 9999854 455555555544444211 100000 01467
Q ss_pred HHHHHHHHHHhhcCcccccc----cchhhcccc
Q 011399 445 YLRDALVELLFKDGRFRHVL----YSPFTINLV 473 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~----~~~~~~~~~ 473 (487)
+.|+.+..+|.+||+.|+.. .+--.|+||
T Consensus 252 ~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF 284 (357)
T KOG0598|consen 252 EARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFF 284 (357)
T ss_pred HHHHHHHHHhccCHHHhcCCCCChHHhhcCccc
Confidence 78888888888888888842 222356666
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=262.40 Aligned_cols=280 Identities=22% Similarity=0.286 Sum_probs=198.9
Q ss_pred HHHhhcCCCC--CCHHHHHHHHHHHh-CCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC---hHHHHH
Q 011399 97 LSELQDALPT--FPDAEAFSCIEREL-GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG---IEEAIG 170 (487)
Q Consensus 97 l~~lqd~~~~--~~~~~~~~~i~~~l-g~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~---~~~~~~ 170 (487)
..++.|+... ++-+++...+...- ..+..+.|..+ +.||+|+-|.||.|+...+++.||||.+... .++.+-
T Consensus 241 ~~~~~d~~~~~~~~~~~~~~~l~~v~~~~dP~~~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLil 318 (550)
T KOG0578|consen 241 KQQLSDSSAQSIVSKEEILAKLKRVVSQGDPRSKYTDF--KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLL 318 (550)
T ss_pred ccccCchhccccchHHHHHHHhheeccCCChhhhhcch--hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhH
Confidence 3444444332 33334444443322 33556667777 7799999999999999989999999987422 233333
Q ss_pred HHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEee
Q 011399 171 LDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEW 250 (487)
Q Consensus 171 ~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~ 250 (487)
.++.+|+ ...|+|++.+++.|.. .+..|.||||
T Consensus 319 nEi~Vm~----------~~~H~NiVnfl~Sylv-------------------------------------~deLWVVMEy 351 (550)
T KOG0578|consen 319 NEILVMR----------DLHHPNIVNFLDSYLV-------------------------------------GDELWVVMEY 351 (550)
T ss_pred HHHHHHH----------hccchHHHHHHHHhcc-------------------------------------cceeEEEEee
Confidence 3333333 3447888887776531 2667899999
Q ss_pred cCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHH
Q 011399 251 VEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIG 328 (487)
Q Consensus 251 ~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~ 328 (487)
++||+|.|+.......+.....+.+.++.||+|||..||+|||||..|||++.+|.+||+|||++.++.++. |.++.|
T Consensus 352 m~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVG 431 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVG 431 (550)
T ss_pred cCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccC
Confidence 999999998554444444555566778889999999999999999999999999999999999999997763 445555
Q ss_pred HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHH-HHHH
Q 011399 329 HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYY-ALIL 407 (487)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~-~~l~ 407 (487)
+ |.+|+++.+..-.+++++||||||....||+++ -||+| ..-+
T Consensus 432 T--------PYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveG----------------------------EPPYlnE~Pl 475 (550)
T KOG0578|consen 432 T--------PYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEG----------------------------EPPYLNENPL 475 (550)
T ss_pred C--------CCccchhhhhhcccCccccchhhhhHHHHHhcC----------------------------CCCccCCChH
Confidence 4 777777777777779999999999999888873 12222 1122
Q ss_pred HHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 408 RSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 408 r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
|++-. ++...-|.+.. ....||.+|++|.+||+.|+.+||++.+-+.|+||..-
T Consensus 476 rAlyL---Ia~ng~P~lk~------------~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 476 RALYL---IATNGTPKLKN------------PEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred HHHHH---HhhcCCCCcCC------------ccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 22211 11112233221 12468999999999999999999999999999999554
|
|
| >KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=236.72 Aligned_cols=318 Identities=23% Similarity=0.295 Sum_probs=251.7
Q ss_pred CCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChH
Q 011399 87 DICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE 166 (487)
Q Consensus 87 d~~p~~~~~~l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~ 166 (487)
.++|+...+-+++.++++-.+|..++.+++..++|..|.+.|++||+.|.+.+|+||||+|+++ +|..||||+|+|++.
T Consensus 8 ~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~-~g~eVavKiQYPGva 86 (363)
T KOG1234|consen 8 SLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLA-DGPEVAVKIQYPGVA 86 (363)
T ss_pred CccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhc-CCCeeeeecCCCchh
Confidence 4799999999999999999999999999999999999999999999999999999999999998 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceE
Q 011399 167 EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVL 246 (487)
Q Consensus 167 ~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~L 246 (487)
+.++.|+..+..+...-..+. ...-+..+++..++.+..|.||.+||..+.+|+..+++++.+++|.|+.++|+.+++
T Consensus 87 ~sI~SD~~nl~~lLn~s~llP--kGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~Elct~rvl 164 (363)
T KOG1234|consen 87 RSIDSDANNLSRLLNFSGLLP--KGLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVDELCTVRVL 164 (363)
T ss_pred hhccCcHHHHHHHHhhccccc--ccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHHhhccchhh
Confidence 999999999888876543331 134566778888889999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCC-CcEEEEecCCCCCCCHHHHHH
Q 011399 247 TMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFA 325 (487)
Q Consensus 247 vmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~-g~i~l~DFGla~~l~~~~~~~ 325 (487)
+||++.|.++....... ......+....+...|+.++...++.-||.-+|+|.+.. .+|.|+|||.++..+.+....
T Consensus 165 t~el~~G~pid~~~~~s--Q~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~tk~i~LlDFGAsr~y~~~F~d~ 242 (363)
T KOG1234|consen 165 TLELGQGLPIDKTAKLS--QETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGRTKKIELLDFGASREYGEKFIDK 242 (363)
T ss_pred hhhhhcCccchhhhccc--HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCCcceEEEEeccccccccHHHHHH
Confidence 99999999887652211 111223334556668999999999999999999999854 569999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHcCCCCCC-CCcchHHHHHHHHH---HHhc---cCCCCcCcHHHHHHHHHHHHhhCCCC
Q 011399 326 IIGHVVHMVNRDYEAMARDYYALDFLSPD-VDVTPIVPALRNFF---DDAL---NSSVSELNFKTIVDGLGAVLYQYPFN 398 (487)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~Di~sl~~~l~~~~---~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~ 398 (487)
++.++.+.+.+|-+.+.+--..+|+.+.- +++-. ..-+...+ +++. +..+..-+...-+..+..++-++...
T Consensus 243 Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~Es~~m~-DAHv~sv~ilgepfa~~~pydF~~q~~t~ri~~lipvmL~hRL~ 321 (363)
T KOG1234|consen 243 YIRLLKAAADRDREGVIEMSRELGFLTGYESKVME-DAHVESVMILGEPFASDGPYDFGDQTVTDRIQNLIPVMLRHRLC 321 (363)
T ss_pred HHHHHHHHHhcchHHHHHHHHHhcccccchHHHHH-HHhhhHhhhccccccCCCCcCcCccHHHHHHHhhhHHHHhccCC
Confidence 99999999999999998888889987542 22110 01111111 1111 11122223334455555666667766
Q ss_pred CChH-HHHHHHHH
Q 011399 399 VPAY-YALILRSL 410 (487)
Q Consensus 399 ~p~~-~~~l~r~l 410 (487)
-||+ .-.+-|.+
T Consensus 322 pPPeEtYsLHRkl 334 (363)
T KOG1234|consen 322 PPPEETYSLHRKL 334 (363)
T ss_pred CCcHHHHHHHHHh
Confidence 6665 34455555
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=252.42 Aligned_cols=260 Identities=16% Similarity=0.185 Sum_probs=164.6
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ ++||+|+||+||+|+-+.||..+|+|++++.. +--... .+.+..
T Consensus 143 Fe~L--k~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~-------M~~~~Q-----------------------v~hV~a 190 (550)
T KOG0605|consen 143 FELL--KVIGKGAFGEVRLARKKDTGEIYAMKILKKSE-------MLKKNQ-----------------------VEHVRA 190 (550)
T ss_pred chhh--eeeccccceeEEEEEEccCCcEEeeecccHHH-------HHhhhh-----------------------HHHHHH
Confidence 4444 88999999999999999999999999997431 110111 112333
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecC--CCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~l 284 (487)
|-|.+.|+ +.+ .|.+.|..+ ....||||||++||++..++.. .....+..+.+......|+.-+
T Consensus 191 ERdiL~~~-----------ds~--~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~i 257 (550)
T KOG0605|consen 191 ERDILAEV-----------DSP--WVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESI 257 (550)
T ss_pred HHHHhhhc-----------CCC--cEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHH
Confidence 44444332 122 234455433 3456899999999999876432 3345678889999999999999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH------------------------------------
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG------------------------------------ 328 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~------------------------------------ 328 (487)
|.+|++||||||+|+||+..|++||.|||++.-+....+.....
T Consensus 258 H~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 337 (550)
T KOG0605|consen 258 HQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTW 337 (550)
T ss_pred HHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHH
Confidence 99999999999999999999999999999997654432221100
Q ss_pred -----HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHH
Q 011399 329 -----HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYY 403 (487)
Q Consensus 329 -----~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~ 403 (487)
.+.+-.-+.|+++|++++.---.+...|.||+||.++|++-+| +|+...+..+....|... +..+..|++
T Consensus 338 ~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGy--PPF~s~tp~~T~rkI~nw--r~~l~fP~~- 412 (550)
T KOG0605|consen 338 KRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGY--PPFCSETPQETYRKIVNW--RETLKFPEE- 412 (550)
T ss_pred HhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHHH--hhhccCCCc-
Confidence 0001112455555555442222355667777777777766654 344443333322222110 001111111
Q ss_pred HHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccc---cchhhccccc
Q 011399 404 ALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVL---YSPFTINLVD 474 (487)
Q Consensus 404 ~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~---~~~~~~~~~~ 474 (487)
...+++++|++.++|+ |+..|... .+--.||||.
T Consensus 413 ------------------------------------~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~ 449 (550)
T KOG0605|consen 413 ------------------------------------VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFK 449 (550)
T ss_pred ------------------------------------CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccc
Confidence 1346888999999999 88888872 3455889983
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-30 Score=261.93 Aligned_cols=255 Identities=18% Similarity=0.233 Sum_probs=174.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.|+.|.+..+|+.||||++....... .. ....+.+.+|+
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~-----------------------~~-----~~~~~~i~rEi---- 70 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS-----------------------KS-----QKLDELIKREI---- 70 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccc-----------------------cc-----cccchhhHHHH----
Confidence 68999999999999999899999999875320000 00 00011111222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
.++.++ ..+++|.--.-+....+..++||||+.||+|.+.... ....++..+.+.+|+..|++|+|++||+||
T Consensus 71 --~~~~~~----~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HR 144 (370)
T KOG0583|consen 71 --SILRRL----RSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHR 144 (370)
T ss_pred --HHHHHh----ccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeC
Confidence 222222 2233333222333445668999999999999887655 233456677889999999999999999999
Q ss_pred CCCCCCeEEcCC-CcEEEEecCCCCCCC-H-HHHHHHHHHHHHHHhcCHHHHHHHHHH-cC-CCCCCCCcchHHHHHHHH
Q 011399 293 DPHPGNLLATPE-GKLAFLDFGMMSETP-E-EARFAIIGHVVHMVNRDYEAMARDYYA-LD-FLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 293 Dlkp~Nili~~~-g~i~l~DFGla~~l~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g-~~~~~~Di~sl~~~l~~~ 367 (487)
|+||+|||++.+ +++||+|||++.... . ..-.+.+| .+.+++++++. .+ |.+.++|+||+|..|+.|
T Consensus 145 DLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cG--------sp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~m 216 (370)
T KOG0583|consen 145 DLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCG--------SPAYAAPEVLSGKGTYSGKAADVWSLGVILYVL 216 (370)
T ss_pred CCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCC--------CcccCCHHHhCCCCCcCCchhhhhhhHHHHHHH
Confidence 999999999999 999999999999873 2 22223333 34444444443 35 778899999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+.+.+ |+++.+...+... +....+.+|.. + . +++.+
T Consensus 217 l~G~~--PF~d~~~~~l~~k----i~~~~~~~p~~-----------------------------------~--~-S~~~~ 252 (370)
T KOG0583|consen 217 LCGRL--PFDDSNVPNLYRK----IRKGEFKIPSY-----------------------------------L--L-SPEAR 252 (370)
T ss_pred HhCCC--CCCCccHHHHHHH----HhcCCccCCCC-----------------------------------c--C-CHHHH
Confidence 98654 5555443333222 22222223222 1 1 78888
Q ss_pred HHHHHHHhhcCcccccccchhhcccccc-ccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVDF-EFV 478 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~~-~~~ 478 (487)
+++.+||..||..|.+..+-+.|+||.. .+.
T Consensus 253 ~Li~~mL~~~P~~R~t~~~i~~h~w~~~~~~~ 284 (370)
T KOG0583|consen 253 SLIEKMLVPDPSTRITLLEILEHPWFQKENPL 284 (370)
T ss_pred HHHHHHcCCCcccCCCHHHHhhChhhccCCCC
Confidence 9999999999999999999999999987 443
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-30 Score=239.05 Aligned_cols=231 Identities=16% Similarity=0.163 Sum_probs=166.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||.||||.||+++.+.+|..+|+|++... ++--++.+. .+.+|
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~-------~vVklKQve-----------------------H~~nE----- 94 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ-------KVVKLKQVE-----------------------HTHNE----- 94 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHH-------HHHHHHHHH-----------------------HHhhH-----
Confidence 7899999999999999999999999998632 111111111 11111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
-+.+.... ++ .+-+.++ ...+..+|||||++||.|..+.+. ++......+.++.++.+|++|||+.+|+
T Consensus 95 -k~vL~~v~-----~P--Flv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~ii 166 (355)
T KOG0616|consen 95 -KRVLKAVS-----HP--FLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDII 166 (355)
T ss_pred -HHHHhhcc-----Cc--eeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCee
Confidence 11111111 11 1222222 234667899999999999887442 3556778899999999999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
+||+||+|||++.+|.+|++|||.++.+... ..++| +.|+.+++++....-....+|.|+||..++||+.+
T Consensus 167 YRDLKPENiLlD~~G~iKitDFGFAK~v~~r-T~TlC--------GTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG 237 (355)
T KOG0616|consen 167 YRDLKPENLLLDQNGHIKITDFGFAKRVSGR-TWTLC--------GTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAG 237 (355)
T ss_pred eccCChHHeeeccCCcEEEEeccceEEecCc-EEEec--------CCccccChHHhhcCCCCcchhHHHHHHHHHHHHcC
Confidence 9999999999999999999999999998766 23344 45888888887666668899999999999999986
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhh
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLAL 418 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~ 418 (487)
+ .|+-+.+--.+.+.+...-..+|....+....+++.++..+-..+
T Consensus 238 ~--pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 238 Y--PPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred C--CCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 5 466665655666666655555666666677777777766554433
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=257.87 Aligned_cols=278 Identities=20% Similarity=0.203 Sum_probs=203.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||.||||.|++|..+.+++.+|||+++++..-. +.|++.++...++++... .||-++.+...|+.
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~~~~EkrI~~la~--~HPFL~~L~~~fQT---------- 440 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVESLMCEKRIFELAN--RHPFLVNLFSCFQT---------- 440 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHHHHHHHHHHHHhc--cCCeEeeccccccc----------
Confidence 67999999999999999999999999998762211 334444444444433222 36655555554442
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.+..+.||||+.||++..+.+.+...+...+++...+..||+|+|++|||+||
T Consensus 441 ---------------------------~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRD 493 (694)
T KOG0694|consen 441 ---------------------------KEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRD 493 (694)
T ss_pred ---------------------------CCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeee
Confidence 36678999999999987776556667778889999999999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCC--HHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETP--EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|-+|||++.+|.+||+||||++.-- .....++|| .|+.+++++..-+-++..+|.|+||+.||+|+.+
T Consensus 494 lKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCG--------Tpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~G- 564 (694)
T KOG0694|consen 494 LKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCG--------TPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVG- 564 (694)
T ss_pred cchhheEEcccCcEEecccccccccCCCCCccccccC--------ChhhcChhhhccCcccchhhHHHHHHHHHHHHcC-
Confidence 99999999999999999999999753 223344554 5888888888777789999999999999999974
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHH--------hHhHHHHHHhccCCC
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA--------ASYPYFAKRLLTDPN 443 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~--------~~~p~~~~~l~~~~~ 443 (487)
..|+.+.+-..+.++|...-..+|..++.+...+++.+++ -+|.-++-. .++||+.. .+
T Consensus 565 -q~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~-------k~p~kRLG~~e~d~~~i~~hpFFr~-----i~ 631 (694)
T KOG0694|consen 565 -ESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLR-------KNPEKRLGSGERDAEDIKKHPFFRS-----ID 631 (694)
T ss_pred -CCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhc-------cCcccccCCCCCCchhhhhCCcccc-----CC
Confidence 4577777778888888777777899999999999998844 455544432 13444321 11
Q ss_pred HHHHHHHHHHHh--hcCcccccccchhhcccccccccc
Q 011399 444 PYLRDALVELLF--KDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 444 p~~r~~l~~~L~--~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
..+++. ..|.++....+..=.+.||.||-.
T Consensus 632 ------w~~L~~r~i~PPf~P~i~~~~D~snFd~eFt~ 663 (694)
T KOG0694|consen 632 ------WDDLLNRRIKPPFVPTIKGPEDVSNFDEEFTS 663 (694)
T ss_pred ------HHHHhhccCCCCCCcccCChhhhcccchhhhc
Confidence 223333 245555555555555666666543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=252.93 Aligned_cols=248 Identities=17% Similarity=0.245 Sum_probs=183.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.||||.||+|+.+.+++.||+|++.+.-+. ..|++.++.-.++ ...++|+|++++++-|+..
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~--~k~l~~l~~ev~i---~r~lkHpniv~m~esfEt~--------- 73 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN--EKELKNLRQEVRI---LRSLKHPNIVEMLESFETS--------- 73 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCc--hHHHHHHHHHHHH---HHhcCCcchhhHHHhhccc---------
Confidence 5699999999999999999999999998644322 3344444433333 3344599999999877643
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+..|+|.||+.| +|..+... ...+++..+.+..++..||.|+|+++|+||
T Consensus 74 ----------------------------~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhr 124 (808)
T KOG0597|consen 74 ----------------------------AHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHR 124 (808)
T ss_pred ----------------------------ceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 677899999999 88776543 345677777888889999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|+||.|||+..+|.+|++|||+++.++... .+.+.+.+.|-+|+++++.-+..+..+|.||+||.+||++.+
T Consensus 125 d~kPqniLl~~~~~~KlcdFg~Ar~m~~~t------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G-- 196 (808)
T KOG0597|consen 125 DMKPQNILLEKGGTLKLCDFGLARAMSTNT------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVG-- 196 (808)
T ss_pred cCCcceeeecCCCceeechhhhhhhcccCc------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcC--
Confidence 999999999999999999999999876532 234456677888888888877888899999999999999973
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHh---HhHHHHHHhc
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAKRLL 439 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~~l~ 439 (487)
..|+-..++.+++..|.+-....|....+.|..+++++ ..-||..++... .+||++....
T Consensus 197 ~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gL-------L~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 197 QPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGL-------LIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred CCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHH-------hhcChhhcccHHHHhcChHHhhhhh
Confidence 35655555555554443332233334445555555555 346787777655 5788776653
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=225.74 Aligned_cols=238 Identities=18% Similarity=0.168 Sum_probs=155.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHH-HHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID-EFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~Eld~~ 212 (487)
+.||.||||.||++....+|..||.|.+.-+.-+. +.-..+......+.+++|+|+++... .|.+.
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~-----k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~-------- 91 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDA-----KARQDCVKEISLLKQLNHPNIVQYYAHSFIED-------- 91 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccH-----HHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc--------
Confidence 67999999999999999999999999886432211 11111222223333556999999887 33221
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHHH--HHHHHHHHHHHHHHH-
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLD--LVNTGIQCSLRQLLE- 286 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~--~~~~~i~~~l~~lh~- 286 (487)
+ .-.+||||||++|+|+.++..-+ .-++... .+..|++.||..+|.
T Consensus 92 --~--------------------------evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~ 143 (375)
T KOG0591|consen 92 --N--------------------------EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK 143 (375)
T ss_pred --c--------------------------hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc
Confidence 0 11359999999999998865322 1133333 334677789999998
Q ss_pred -CC--ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 287 -YG--YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 287 -~g--ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
.. ++||||||+||+++.+|.+||.|||+++.++.+... -.++ -+.|..|.++...-.-.++++|+||+||.
T Consensus 144 ~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tf-A~S~-----VGTPyYMSPE~i~~~~Y~~kSDiWslGCl 217 (375)
T KOG0591|consen 144 IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTF-AHSL-----VGTPYYMSPERIHESGYNFKSDIWSLGCL 217 (375)
T ss_pred ccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHH-HHhh-----cCCCcccCHHHHhcCCCCcchhHHHHHHH
Confidence 55 999999999999999999999999999998765321 1122 23344443333333334899999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCC-hHHHHHHHHHHHHHHhhhhhCCCCCh
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVP-AYYALILRSLTVLEGLALYADPNFKV 426 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p-~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (487)
++||+. +..|+.+.++-++-..+... .-..+| ..++.-++.++ ..+...||+.++
T Consensus 218 lyEMca--L~~PF~g~n~~~L~~KI~qg---d~~~~p~~~YS~~l~~li---~~ci~vd~~~RP 273 (375)
T KOG0591|consen 218 LYEMCA--LQSPFYGDNLLSLCKKIEQG---DYPPLPDEHYSTDLRELI---NMCIAVDPEQRP 273 (375)
T ss_pred HHHHHh--cCCCcccccHHHHHHHHHcC---CCCCCcHHHhhhHHHHHH---HHHccCCcccCC
Confidence 999997 56777777765555444322 122356 33443333332 233445555544
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-29 Score=244.41 Aligned_cols=250 Identities=17% Similarity=0.178 Sum_probs=166.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCCh---HHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGI---EEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~---~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+-||+|+||.||++..+.+|+..|||...-.. .+.+..++.+|+ .+.|++|++......
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~----------~l~~p~IV~~~G~~~-------- 84 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILS----------RLNHPNIVQYYGSSS-------- 84 (313)
T ss_pred ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHH----------hCCCCCEEeeCCccc--------
Confidence 66999999999999999889999999875331 111222222222 112444444433110
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCC-CCceEEEeecCCCCcCcHHHHHh--cCCCHHHHHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYT-SGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~-~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
... ...++.|||++||+|.++..... .+++..+.+.+++..+|.|||++
T Consensus 85 ----------------------------~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 85 ----------------------------SRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred ----------------------------cccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 001 14579999999999999855433 35566778889999999999999
Q ss_pred CccccCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCCCCcchHHHHHH
Q 011399 288 GYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF-LSPDVDVTPIVPALR 365 (487)
Q Consensus 288 givH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~Di~sl~~~l~ 365 (487)
||+||||||+|||++. +|.+||+|||+++....... ......-..+.+..|+++.+..|. ..+++|+||+||++-
T Consensus 137 g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~---~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVv 213 (313)
T KOG0198|consen 137 GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT---KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVV 213 (313)
T ss_pred CEeccCcccceEEEeCCCCeEEeccCccccccccccc---cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEE
Confidence 9999999999999999 79999999999998763100 000001123345566666665454 346899999999999
Q ss_pred HHHHHhccCCCCcC-cHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 366 NFFDDALNSSVSEL-NFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 366 ~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
||+++ ..|..+. ..... +..+..+ . ..|. +....++
T Consensus 214 EM~Tg--~~PW~~~~~~~~~---~~~ig~~-----------------------~-~~P~--------------ip~~ls~ 250 (313)
T KOG0198|consen 214 EMLTG--KPPWSEFFEEAEA---LLLIGRE-----------------------D-SLPE--------------IPDSLSD 250 (313)
T ss_pred eccCC--CCcchhhcchHHH---HHHHhcc-----------------------C-CCCC--------------CCcccCH
Confidence 99985 3343332 11111 1111100 0 1121 1123578
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
++++++.+|+.+||+.||++.+-+.|+|..-
T Consensus 251 ~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 251 EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 8999999999999999999999999998843
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=248.77 Aligned_cols=217 Identities=17% Similarity=0.174 Sum_probs=163.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCC------hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG------IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~------~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
+.||.|+-|.|-.|++..||+.+|||++... ....++.++.+|+-+. |+|+..+++.++
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~----------HpnVl~LydVwe----- 82 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE----------HPNVLRLYDVWE----- 82 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc----------CCCeeeeeeeec-----
Confidence 6799999999999999999999999999644 2334666666666554 777777666443
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
-....|||.||++||.|.++...+ ......+.-+.+||..++.|||.
T Consensus 83 --------------------------------~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~ 130 (786)
T KOG0588|consen 83 --------------------------------NKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHA 130 (786)
T ss_pred --------------------------------cCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 346778999999999999885433 22344555667899999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcchHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYA-LDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~Di~sl~~~l 364 (487)
.+|+|||+||+|+|++..++|||+|||||..-.+. .-++ ..+.|.++++++.. .-|-+.+.|+||+|+.|
T Consensus 131 ~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeT--------SCGSPHYA~PEIV~G~pYdG~~sDVWSCGVIL 202 (786)
T KOG0588|consen 131 FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLET--------SCGSPHYAAPEIVSGRPYDGRPSDVWSCGVIL 202 (786)
T ss_pred hcceeccCCchhhhhhcccCEeeeccceeecccCCccccc--------cCCCcccCCchhhcCCCCCCCccccchhHHHH
Confidence 99999999999999999999999999999754332 2223 33445555555542 23667789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALIL 407 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~ 407 (487)
+.++++. .|+++.+...++..+....+++|-.+|++...++
T Consensus 203 fALLtG~--LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLL 243 (786)
T KOG0588|consen 203 FALLTGK--LPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLL 243 (786)
T ss_pred HHHHhCC--CCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHH
Confidence 9999965 5788889998888887666666555544433333
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-28 Score=249.95 Aligned_cols=281 Identities=17% Similarity=0.188 Sum_probs=172.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChH--HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE--EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~--~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|+||||-+|.++.||+.||||+++.... .+...++++|..+.. .-+....|++.+.+
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~----~d~~~~~n~Vrm~d------------ 255 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNK----HDPDDKYNIVRMLD------------ 255 (586)
T ss_pred EEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhc----cCCCCCeeEEEeee------------
Confidence 679999999999999999999999999975422 122222222221110 00111122233222
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cC--CCHHHHHHHHHHHHHHHHHHCC
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QG--LKVLDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~--~~~~~~~~~~i~~~l~~lh~~g 288 (487)
|..+.+..|||.|.++- +|.+++..++ .| ....+.+..+++.+|..||+.|
T Consensus 256 -------------------------~F~fr~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~ 309 (586)
T KOG0667|consen 256 -------------------------YFYFRNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG 309 (586)
T ss_pred -------------------------ccccccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 22345778999999954 7877755433 23 4456677789999999999999
Q ss_pred ccccCCCCCCeEEcCCC--cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEG--KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g--~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|||+||||+|||+..-+ .||+||||.+...++.. ...+.+..|+.||.+... -++.++|+|||||+++|
T Consensus 310 IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v----ytYiQSRfYRAPEVILGl-----pY~~~IDmWSLGCIlAE 380 (586)
T KOG0667|consen 310 IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV----YTYIQSRFYRAPEVILGL-----PYDTAIDMWSLGCILAE 380 (586)
T ss_pred eeeccCChhheeeccCCcCceeEEecccccccCCcc----eeeeeccccccchhhccC-----CCCCccceeehhhhHHh
Confidence 99999999999998554 69999999999876542 345567888888876322 23889999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHH-HHHHHHH-HHHHHhhhhhCCCCChH---------HhHhHHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYY-ALILRSL-TVLEGLALYADPNFKVL---------AASYPYFA 435 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~-~~l~r~l-~~leg~~~~ldP~~~~~---------~~~~p~~~ 435 (487)
++.++--.+ +.+-.+ .+..++. -+++||.. ....+.. ...+.. .-.|..... .....+..
T Consensus 381 L~tG~PLfp--G~ne~D---Ql~~I~e--~lG~Pp~~mL~~~~~~~kff~~~--~~~~~~~~~~~~~~~~k~~~~~~~~~ 451 (586)
T KOG0667|consen 381 LFTGEPLFP--GDNEYD---QLARIIE--VLGLPPPKMLDTAKKAHKFFTSL--KGFPRLCVETSAPRGTKSPEVRKYYR 451 (586)
T ss_pred HhcCccccC--CCCHHH---HHHHHHH--HhCCCCHHHHHhccccceehhcc--CCceeeeeeecccccccchhhhhhhh
Confidence 998632122 222111 2222222 12344432 2111111 000000 000000000 00111111
Q ss_pred HHh----------------ccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 436 KRL----------------LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 436 ~~l----------------~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
... .........+++.+||.-||.+||+..+++.|+|+.
T Consensus 452 ~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~ 506 (586)
T KOG0667|consen 452 KARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLT 506 (586)
T ss_pred hhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccc
Confidence 111 112234557899999999999999999999999997
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-28 Score=240.04 Aligned_cols=270 Identities=17% Similarity=0.128 Sum_probs=168.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.|-+|+...+|+.||||++...-... .. ..++.+..--.-.+. ..+
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~----------------~~---~~~~~~a~~~~~~ek------v~~ 157 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRR----------------QY---GFPRQPAMKLMPIEK------VRR 157 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhhh----------------hc---ccccccccccCcHHH------HHH
Confidence 56999999999999999999999999986431110 00 001100000000011 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++.+ -.-|..-.|+.+ .++..|||.|||..|.+........ ......+.+.+.+..||+|||.+||+|
T Consensus 158 EIailKkl~H----~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiH 233 (576)
T KOG0585|consen 158 EIAILKKLHH----PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIH 233 (576)
T ss_pred HHHHHHhcCC----cCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 2233333321 122333344443 3567899999999999876533222 445667778888999999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCH----HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPE----EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|||||.|+|++.+|.+||.|||.+...+. +.-..+..++++.+.-.||.+.... ..-+.+...|+|++|++||-+
T Consensus 234 RDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~-~~~~~g~a~DiWalGVTLYCl 312 (576)
T KOG0585|consen 234 RDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGN-SFSYSGFALDIWALGVTLYCL 312 (576)
T ss_pred cccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCC-CccccchhhhhhhhhhhHHHh
Confidence 99999999999999999999999876521 1112233333333333344432210 012346678999999999887
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+-+. .|+-+...- ++..-+...+...|.+ | +.++.++
T Consensus 313 lfG~--~PF~~~~~~----~l~~KIvn~pL~fP~~-------------------p------------------e~~e~~k 349 (576)
T KOG0585|consen 313 LFGQ--LPFFDDFEL----ELFDKIVNDPLEFPEN-------------------P------------------EINEDLK 349 (576)
T ss_pred hhcc--CCcccchHH----HHHHHHhcCcccCCCc-------------------c------------------cccHHHH
Confidence 7532 233222211 1222222223333322 1 3468899
Q ss_pred HHHHHHHhhcCcccccccchhhccccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
+.+.++|+|||..|.+...--.|+|.+-+
T Consensus 350 Dli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 350 DLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHHHhhcChhheeehhhheecceeccC
Confidence 99999999999999999999999998544
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=240.25 Aligned_cols=255 Identities=18% Similarity=0.216 Sum_probs=171.6
Q ss_pred CCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 122 ~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
.++...|..+ +.||.|+||.||+|.+..+++.||+|++.-...+...
T Consensus 9 ~~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deI------------------------------- 55 (467)
T KOG0201|consen 9 IDPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEI------------------------------- 55 (467)
T ss_pred CCcccccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhh-------------------------------
Confidence 3556667777 6799999999999999999999999999633221111
Q ss_pred HHHHHHHhcHHHHHH--HHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-CCCHHHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQ--NARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKVLDLVNTGIQ 278 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~--~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~~~~~~~~i~ 278 (487)
+.+.+|+.++.+.+ |+.+.+..|- ..+..+++||||.||++.+....... .+....++.+.+.
T Consensus 56 -ediqqei~~Ls~~~~~~it~yygsyl-------------~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l 121 (467)
T KOG0201|consen 56 -EDIQQEISVLSQCDSPNITEYYGSYL-------------KGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVL 121 (467)
T ss_pred -HHHHHHHHHHHhcCcchHHhhhhhee-------------ecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHH
Confidence 11222333332222 1222222111 13667899999999999988554333 3344455667888
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
.++.|+|.++.+|||+|+.|||+..+|.+||+|||.+.+++... +.++.|+ |-+|++++.....++.+.|
T Consensus 122 ~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGT--------PfwMAPEVI~~~~Y~~KAD 193 (467)
T KOG0201|consen 122 KGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGT--------PFWMAPEVIKQSGYDTKAD 193 (467)
T ss_pred HHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccccccc--------ccccchhhhccccccchhh
Confidence 89999999999999999999999999999999999999997653 3445554 5556666666545588999
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
|||||.+.+++.++ ..|.....- ..+++..+-.-||.
T Consensus 194 IWSLGITaiEla~G--ePP~s~~hP-------mrvlflIpk~~PP~---------------------------------- 230 (467)
T KOG0201|consen 194 IWSLGITAIELAKG--EPPHSKLHP-------MRVLFLIPKSAPPR---------------------------------- 230 (467)
T ss_pred hhhhhHHHHHHhcC--CCCCcccCc-------ceEEEeccCCCCCc----------------------------------
Confidence 99999999998873 344443321 01111112222221
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+-.+.+|.++++++-||.+||+.||++.+.+.|.|..-
T Consensus 231 -L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 231 -LDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred -cccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 11245677788888888888888888887777776643
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-27 Score=232.57 Aligned_cols=279 Identities=18% Similarity=0.117 Sum_probs=170.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+.+....... ....+...+..+....|++++.+.+.+.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~----------- 70 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEE-----VKETTLRELKMLRTLKQENIVELKEAFR----------- 70 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEeccccccc-----chhhHHHHHHHHHhCCCccccchhhhEe-----------
Confidence 679999999999999998999999999864321100 0000111111112233666666554332
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
.....++||||++|+.+..+... ..+.+ ....+..++..++.|+|+.|++|
T Consensus 71 --------------------------~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 123 (287)
T cd07848 71 --------------------------RRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVH 123 (287)
T ss_pred --------------------------cCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 12456899999999877654221 12233 33445678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||+||+++.+|.++|+|||++..+................+..||. ...+..+..+|+||+|+.+++++++.
T Consensus 124 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~DiwslGvil~el~~g~ 198 (287)
T cd07848 124 RDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPEL-----LLGAPYGKAVDMWSVGCILGELSDGQ 198 (287)
T ss_pred CCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHH-----HcCCCCCCchhHHhHHHHHHHHHhCC
Confidence 9999999999999999999999998765432111111112223334443 33344578899999999999999853
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+.......+.. ..-.+|+............... -.|... .... .........++.+++.+.
T Consensus 199 --~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~-~~~~~~~~~s~~~~dll~ 265 (287)
T cd07848 199 --PLFPGESEIDQLFTIQK----VLGPLPAEQMKLFYSNPRFHGL---RFPAVN---HPQS-LERRYLGILSGVLLDLMK 265 (287)
T ss_pred --CCCCCCCHHHHHHHHHH----hhCCCCHHHHHhhhccchhccc---ccCccc---Cccc-HHHhhhcccCHHHHHHHH
Confidence 34444443332222222 2223344322111100000000 001100 0001 112223346789999999
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+||..||.+|++..+.+.|+||
T Consensus 266 ~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 266 NLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHccCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=228.62 Aligned_cols=246 Identities=17% Similarity=0.106 Sum_probs=163.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|..+.+|+.||||++....... .+....+....+.+....|++++.+.+.+..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---------- 72 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----LKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD---------- 72 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----hHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc----------
Confidence 67999999999999998899999999986431111 1111112222222333457777777654321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
....++||||++|++|.++..... ........+..++..++.|+|+.|++||
T Consensus 73 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 125 (291)
T cd05612 73 ---------------------------QRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYR 125 (291)
T ss_pred ---------------------------CCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 144579999999999987743321 2223334556788889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.++|+|||++..+..... ... +.+..++++.......+.++|+||+|+.+++++++.
T Consensus 126 dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~-~~~--------gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~- 195 (291)
T cd05612 126 DLKPENILLDKEGHIKLTDFGFAKKLRDRTW-TLC--------GTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGY- 195 (291)
T ss_pred CCCHHHeEECCCCCEEEEecCcchhccCCcc-ccc--------CChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCC-
Confidence 9999999999999999999999987654321 112 223334444443344578899999999999999843
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.++...+...+...+.. + .+.+ ....++.+++.+.+
T Consensus 196 -~pf~~~~~~~~~~~i~~------------------------~-----~~~~--------------~~~~~~~~~~li~~ 231 (291)
T cd05612 196 -PPFFDDNPFGIYEKILA------------------------G-----KLEF--------------PRHLDLYAKDLIKK 231 (291)
T ss_pred -CCCCCCCHHHHHHHHHh------------------------C-----CcCC--------------CccCCHHHHHHHHH
Confidence 33333332221111100 0 0010 11346788999999
Q ss_pred HHhhcCccccc-----ccchhhccccc
Q 011399 453 LLFKDGRFRHV-----LYSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~-----~~~~~~~~~~~ 474 (487)
||..||..|.+ ..+.+.|+||.
T Consensus 232 ~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 232 LLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred HcCCCHHHccCCccCCHHHHhcCcccc
Confidence 99999999996 66788999995
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=228.00 Aligned_cols=227 Identities=17% Similarity=0.188 Sum_probs=176.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.+|+|.||.|-+|+.+..|+.||||.++.+..+ |-+-|-.+.+.++.+..++||+|+++++.|+..
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIk----deqDlvhIRREIeIMSsLNHPhII~IyEVFENk--------- 125 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIK----DEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK--------- 125 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcc----cHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC---------
Confidence 6799999999999999889999999998765322 233344455555666777899999998877633
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
...+|||||..||.|.|++... .......+-+.+||.+++.|+|.++++||
T Consensus 126 ----------------------------dKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHR 177 (668)
T KOG0611|consen 126 ----------------------------DKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHR 177 (668)
T ss_pred ----------------------------ceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceec
Confidence 6678999999999999986543 34556677888999999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|+|.+|||++.++++||+|||++..+... .-.+|||. ..+.+|+.+. ..-|-+|++|-||+|..||.++-
T Consensus 178 DLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGS---PLYASPEIvN----G~PY~GPEVDsWsLGvLLYtLVy-- 248 (668)
T KOG0611|consen 178 DLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGS---PLYASPEIVN----GTPYKGPEVDSWSLGVLLYTLVY-- 248 (668)
T ss_pred ccchhheeecCCCCeeeeccchhhhhccccHHHHhcCC---cccCCccccC----CCCCCCCccchhhHHHHHHHHhh--
Confidence 99999999999999999999999877543 33445543 3333444331 23366899999999999998875
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLT 411 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~ 411 (487)
...|+++.+++.++.++....|.-|. .|.+...++|-++
T Consensus 249 GtMPFDG~Dhk~lvrQIs~GaYrEP~-~PSdA~gLIRwmL 287 (668)
T KOG0611|consen 249 GTMPFDGRDHKRLVRQISRGAYREPE-TPSDASGLIRWML 287 (668)
T ss_pred cccccCCchHHHHHHHhhcccccCCC-CCchHHHHHHHHH
Confidence 44689999999999998877776443 5677777777664
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-27 Score=235.32 Aligned_cols=248 Identities=19% Similarity=0.142 Sum_probs=155.4
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHH-HHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFY-LIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~-~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
.||+|+||+||+|+++.+|+.||||++++..... ..+.. .++....+ .. ...|++++.+.+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l-~~--~~~h~~iv~~~~-------------- 63 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ-DDDVECTMTEKRIL-SL--ARNHPFLTQLYC-------------- 63 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh-ccHHHHHHHHHHHH-Hh--ccCCCchhceee--------------
Confidence 5899999999999999899999999987432110 00000 00000000 00 001233222222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+.......++||||++|++|.+..... .........+..++..++.|+|+.|++||
T Consensus 64 -----------------------~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~ 120 (320)
T cd05590 64 -----------------------CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120 (320)
T ss_pred -----------------------EEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 112335578999999999997764322 12233344556788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.++|+|||++......... . ....+.+..++++.......++++|+||+|+.+++++++.
T Consensus 121 dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~-~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~- 193 (320)
T cd05590 121 DLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT-T-----STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGH- 193 (320)
T ss_pred CCCHHHeEECCCCcEEEeeCCCCeecCcCCCc-c-----cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCC-
Confidence 99999999999999999999998754221100 0 0112333444455544455678899999999999999843
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+...+...+.. .... .| ...++++++.+.+
T Consensus 194 -~Pf~~~~~~~~~~~i~~----~~~~----------------------~~-----------------~~~~~~~~~li~~ 229 (320)
T cd05590 194 -APFEAENEDDLFEAILN----DEVV----------------------YP-----------------TWLSQDAVDILKA 229 (320)
T ss_pred -CCCCCCCHHHHHHHHhc----CCCC----------------------CC-----------------CCCCHHHHHHHHH
Confidence 34444443322221110 0000 01 1235677888999
Q ss_pred HHhhcCcccccc------cchhhccccc
Q 011399 453 LLFKDGRFRHVL------YSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~~------~~~~~~~~~~ 474 (487)
||.+||..|++. .+...|+||.
T Consensus 230 ~L~~dP~~R~~~~~~~~~~~~~~h~~f~ 257 (320)
T cd05590 230 FMTKNPTMRLGSLTLGGEEAILRHPFFK 257 (320)
T ss_pred HcccCHHHCCCCCCCCCHHHHHcCCCcC
Confidence 999999999987 5677888884
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-28 Score=222.68 Aligned_cols=257 Identities=19% Similarity=0.185 Sum_probs=187.5
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
++.|+-+ +.||+|.|+.|+++.+..+|+.+|+|++.-..-. ..|.+-+.+.+++... ++||+|+++.+.+.+.
T Consensus 10 ~d~y~l~--e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~~~~e~l~rEarIC~~---LqHP~IvrL~~ti~~~ 82 (355)
T KOG0033|consen 10 SDNYDVK--EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRK---LQHPNIVRLHDSIQEE 82 (355)
T ss_pred chhhhHH--HHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--cccHHHHHHHHHHHHh---cCCCcEeehhhhhccc
Confidence 3444444 5699999999999999999999999988633222 2355555555555433 3488888887765432
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCc-HHHHHhcCCCHHHHHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE-QVAIESQGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~-~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (487)
+-+|||.|+++|++|.. +....-..+....-+.+|+..++.|
T Consensus 83 -------------------------------------~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~y 125 (355)
T KOG0033|consen 83 -------------------------------------SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAY 125 (355)
T ss_pred -------------------------------------ceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999999854 3333333344455677899999999
Q ss_pred HHHCCccccCCCCCCeEEcCC---CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 284 LLEYGYFHADPHPGNLLATPE---GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~---g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
+|.+||+|||+||.|+++... --+||+|||++..++... ..+| ..+.|..|++++....-++..+|+|+.
T Consensus 126 CH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~--~~~G-----~~GtP~fmaPEvvrkdpy~kpvDiW~c 198 (355)
T KOG0033|consen 126 CHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE--AWHG-----FAGTPGYLSPEVLKKDPYSKPVDIWAC 198 (355)
T ss_pred HHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc--cccc-----ccCCCcccCHHHhhcCCCCCcchhhhh
Confidence 999999999999999999743 249999999999987331 1122 234466666777777777899999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
|..|+-++.++ .|+.+.+...+.+.+....+.++. |. ..
T Consensus 199 GViLfiLL~G~--~PF~~~~~~rlye~I~~g~yd~~~------------------------~~---------------w~ 237 (355)
T KOG0033|consen 199 GVILYILLVGY--PPFWDEDQHRLYEQIKAGAYDYPS------------------------PE---------------WD 237 (355)
T ss_pred hHHHHHHHhCC--CCCCCccHHHHHHHHhccccCCCC------------------------cc---------------cC
Confidence 99999998866 466665666666666544333221 11 12
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
..+|+.++.+++||.-||.+|.+..+++.|+|.
T Consensus 238 ~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 238 TVTPEAKSLIRRMLTVNPKKRITADEALKHPWI 270 (355)
T ss_pred cCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence 457889999999999999999999999999997
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=236.28 Aligned_cols=199 Identities=17% Similarity=0.115 Sum_probs=130.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.++.+|+.||||+.++..... ..+...+....+.+.......|++++.+.+.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~------------- 70 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEVESLMCEKRIFETANSERHPFLVNLFAC------------- 70 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhccccCCCChhceeeE-------------
Confidence 67999999999999998899999999987432110 0111112222222222222234444443321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.......++||||++|++|................+..++..++.|+|+.|++|||
T Consensus 71 ------------------------~~~~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrd 126 (324)
T cd05589 71 ------------------------FQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRD 126 (324)
T ss_pred ------------------------EEcCCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence 12235678999999999987664332233334445667888899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+||+||+++++|.++|+|||++...... ....++ +.+..++++.+..+..+.+.|+||+|+.+++++++.
T Consensus 127 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~ 198 (324)
T cd05589 127 LKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFC--------GTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGE 198 (324)
T ss_pred CCHHHeEECCCCcEEeCcccCCccCCCCCCcccccc--------cCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCC
Confidence 9999999999999999999998754221 111112 223344444444455678899999999999999743
Q ss_pred ccCCCCcCc
Q 011399 372 LNSSVSELN 380 (487)
Q Consensus 372 ~~~~~~~~~ 380 (487)
.++...+
T Consensus 199 --~pf~~~~ 205 (324)
T cd05589 199 --SPFPGDD 205 (324)
T ss_pred --CCCCCCC
Confidence 3444433
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=237.90 Aligned_cols=246 Identities=15% Similarity=0.128 Sum_probs=155.8
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||.||+|+.+.+|+.||||++++..... ..+. .. +..|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~------~~~e 45 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-KDEV-----------------------------AH------TLTE 45 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hHHH-----------------------------HH------HHHH
Confidence 5899999999999998899999999987421100 0000 00 1122
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
...+.++ .++.+.-..-+.......++||||++|++|.+...... ........+..++..+|.|+|+.|++|||
T Consensus 46 ~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD 120 (323)
T cd05571 46 SRVLQNT-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120 (323)
T ss_pred HHHHHhC-----CCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 2222221 12222111112233456789999999999977643221 22333445567888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|||+||+++.+|.++|+|||+++..... .....+ +.+..++++.......+.++|+||+|+.+++++++.
T Consensus 121 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 192 (323)
T cd05571 121 LKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC--------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (323)
T ss_pred CCHHHEEECCCCCEEEeeCCCCcccccCCCccccee--------cCccccChhhhcCCCCCccccCcccchhhhhhhcCC
Confidence 9999999999999999999998754221 111111 233344444444445578899999999999999743
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.|+...+...+...+. . -++.+ ....++.+++.+.
T Consensus 193 --~Pf~~~~~~~~~~~~~----~-------------------------~~~~~--------------p~~~~~~~~~li~ 227 (323)
T cd05571 193 --LPFYNQDHEKLFELIL----M-------------------------EEIRF--------------PRTLSPEAKSLLA 227 (323)
T ss_pred --CCCCCCCHHHHHHHHH----c-------------------------CCCCC--------------CCCCCHHHHHHHH
Confidence 3443333222211110 0 00110 1134677888999
Q ss_pred HHHhhcCcccc-----cccchhhccccc
Q 011399 452 ELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
+||.+||+.|+ +..+.+.|+||.
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~ll~h~~f~ 255 (323)
T cd05571 228 GLLKKDPKQRLGGGPEDAKEIMEHRFFA 255 (323)
T ss_pred HHccCCHHHcCCCCCCCHHHHHcCCCcC
Confidence 99999999998 577778888884
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=232.45 Aligned_cols=288 Identities=17% Similarity=0.192 Sum_probs=176.4
Q ss_pred hhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 127 ~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
.|... ++||+|+||+||+|.+..+|+.||||++........ ..+.+...+..+....|+|++.+.+.+...
T Consensus 16 ~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 86 (343)
T cd07878 16 RYQNL--TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLI-----HARRTYRELRLLKHMKHENVIGLLDVFTPA-- 86 (343)
T ss_pred hhhhh--eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhH-----HHHHHHHHHHHHHhcCCCchhhhhhhhccc--
Confidence 34444 789999999999999988999999999875422211 111111122222334588888877654311
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
. ........+++||++ |++|.++.............+..++..+|.|+|+
T Consensus 87 ----------------------~-------~~~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 136 (343)
T cd07878 87 ----------------------T-------SIENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHS 136 (343)
T ss_pred ----------------------c-------cccccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 001124457999998 6677766433333344455667888899999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|||+||+||+++.+|.++|+|||++........ +...+..+..||.+. .....+.++|+||+|+.+++
T Consensus 137 ~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~e 208 (343)
T cd07878 137 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMT----GYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAE 208 (343)
T ss_pred CCeecccCChhhEEECCCCCEEEcCCccceecCCCcC----CccccccccCchHhc----CCccCCchhhhHhHHHHHHH
Confidence 9999999999999999999999999999987654321 111222333444331 11345778999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++. .++...+....+..+.... .. .++.+..-+..- ....... .-|.... +. ........++.+
T Consensus 209 l~~g~--~pf~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~-~~~~~~~-~~~~~~~-----~~-~~~~~~~~~~~~ 274 (343)
T cd07878 209 LLKGK--ALFPGNDYIDQLKRIMEVV---GT-PSPEVLKKISSE-HARKYIQ-SLPHMPQ-----QD-LKKIFRGANPLA 274 (343)
T ss_pred HHHCC--CCCCCCCHHHHHHHHHHHh---CC-CCHHHHHhcchh-hHHHHhh-ccccccc-----hh-HHHhccCCCHHH
Confidence 99854 3444434333332222211 11 122211100000 0000000 0011100 01 122234567889
Q ss_pred HHHHHHHHhhcCcccccccchhhcccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.+.+.+||..||.+|++..+.+.|+||.-
T Consensus 275 ~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 275 IDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred HHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 99999999999999999999999999954
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-27 Score=233.92 Aligned_cols=246 Identities=17% Similarity=0.118 Sum_probs=158.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++..... +..... . +..
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~--------------------------~------~~~ 67 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KMKQVQ--------------------------H------VAQ 67 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhhHH--------------------------H------HHH
Confidence 6799999999999999989999999998632100 000000 1 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.++ .++++.-..-+....+..++||||++|++|.+..... .........+..++..+|.|+|+.|++||
T Consensus 68 E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~ 142 (329)
T PTZ00263 68 EKSILMEL-----SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYR 142 (329)
T ss_pred HHHHHHhC-----CCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 22222222 1122111111122345678999999999998764322 12233445566788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.++|+|||++..+..... .. .+.+..++++.+.....+.++|+||+|+.+++++++.
T Consensus 143 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~--------~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~- 212 (329)
T PTZ00263 143 DLKPENLLLDNKGHVKVTDFGFAKKVPDRTF-TL--------CGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGY- 212 (329)
T ss_pred CCCHHHEEECCCCCEEEeeccCceEcCCCcc-ee--------cCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCC-
Confidence 9999999999999999999999987754321 11 2334455555555555688899999999999999843
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+.......+. ++ .+.+ ....++.+++.+.+
T Consensus 213 -~pf~~~~~~~~~~~i~------------------------~~-----~~~~--------------p~~~~~~~~~li~~ 248 (329)
T PTZ00263 213 -PPFFDDTPFRIYEKIL------------------------AG-----RLKF--------------PNWFDGRARDLVKG 248 (329)
T ss_pred -CCCCCCCHHHHHHHHh------------------------cC-----CcCC--------------CCCCCHHHHHHHHH
Confidence 3333322211111110 00 0000 01235677889999
Q ss_pred HHhhcCcccccc-----cchhhccccc
Q 011399 453 LLFKDGRFRHVL-----YSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~~-----~~~~~~~~~~ 474 (487)
||..||.+|++. .+.+.|+||.
T Consensus 249 ~L~~dP~~R~~~~~~~~~~ll~hp~f~ 275 (329)
T PTZ00263 249 LLQTDHTKRLGTLKGGVADVKNHPYFH 275 (329)
T ss_pred HhhcCHHHcCCCCCCCHHHHhcCCccC
Confidence 999999999974 5667889985
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=233.20 Aligned_cols=254 Identities=19% Similarity=0.176 Sum_probs=158.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||+++...... ....+ . +..
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~--------------------------~------~~~ 50 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----LNEVR--------------------------H------VLT 50 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhHHH--------------------------H------HHH
Confidence 67999999999999999889999999986431111 00000 1 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.++ . ++.+.-..-+.......++||||++|++|.++..... ........+..++..++.|||+.|++||
T Consensus 51 e~~~l~~~----~-h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 125 (333)
T cd05600 51 ERDILTTT----K-SEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHR 125 (333)
T ss_pred HHHHHHhC----C-CCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 22211111 1 1211111111223456789999999999988753221 2233444566788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|+||+||+++.+|.++|+|||++....... .... +.+..++++....+..+.++|+||+|+.+++++++.
T Consensus 126 dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~-~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~- 195 (333)
T cd05600 126 DLKPENFLIDASGHIKLTDFGLSKGIVTYA-NSVV--------GSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGF- 195 (333)
T ss_pred CCCHHHEEECCCCCEEEEeCcCCccccccc-CCcc--------cCccccChhHhcCCCCCCccceecchHHHhhhhhCC-
Confidence 999999999999999999999998765411 1111 223334444444445678899999999999999753
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+.......+.... .....|.. .+|. ...++++++.+.+
T Consensus 196 -~pf~~~~~~~~~~~i~~~~--~~~~~~~~-----------------~~~~----------------~~~s~~~~~li~~ 239 (333)
T cd05600 196 -PPFSGSTPNETWENLKYWK--ETLQRPVY-----------------DDPR----------------FNLSDEAWDLITK 239 (333)
T ss_pred -CCCCCCCHHHHHHHHHhcc--ccccCCCC-----------------Cccc----------------cccCHHHHHHHHH
Confidence 3454444433332221100 00000100 0111 1346677778888
Q ss_pred HHhhcCcccccccchhhccccc
Q 011399 453 LLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
||..+|.+|.+..+.+.|+||.
T Consensus 240 ~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 240 LINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred HhhChhhhcCCHHHHHhCcccC
Confidence 8887788888887888888875
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=229.35 Aligned_cols=252 Identities=13% Similarity=0.116 Sum_probs=157.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.++.+|+.||||++......... .+..+.+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~------------------------------------~~~~~~~ 49 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK------------------------------------GEAMALN 49 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhh------------------------------------hHHHHHH
Confidence 6799999999999999889999999998643211100 0011223
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++. ++.+.-..-+.......++||||++|++|.+...... .+.+. ...+..++..++.|+|+.|++
T Consensus 50 E~~il~~l~-----~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05631 50 EKRILEKVN-----SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124 (285)
T ss_pred HHHHHHhcC-----CCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 333333221 2222211112233456789999999999976643222 22333 334456788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|||+||.|||++.++.++|+|||++..+...... ... .+.+..++++....+..++++|+||+|+.+++++++
T Consensus 125 H~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~-----~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g 197 (285)
T cd05631 125 YRDLKPENILLDDRGHIRISDLGLAVQIPEGETV--RGR-----VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQG 197 (285)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee--cCC-----CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhC
Confidence 9999999999999999999999999876432110 011 122333344444445567889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+.......+.... ..+.. ......++.+.+.+
T Consensus 198 ~--~pf~~~~~~~~~~~~~~~~---------------------------~~~~~------------~~~~~~s~~~~~li 236 (285)
T cd05631 198 Q--SPFRKRKERVKREEVDRRV---------------------------KEDQE------------EYSEKFSEDAKSIC 236 (285)
T ss_pred C--CCCCCCCcchhHHHHHHHh---------------------------hcccc------------cCCccCCHHHHHHH
Confidence 3 3433322111111110000 00000 01123567788889
Q ss_pred HHHHhhcCccccc-----ccchhhccccc
Q 011399 451 VELLFKDGRFRHV-----LYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~-----~~~~~~~~~~~ 474 (487)
.+||..||..|.+ ..+.+.|+||+
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~~~~h~~~~ 265 (285)
T cd05631 237 RMLLTKNPKERLGCRGNGAAGVKQHPIFK 265 (285)
T ss_pred HHHhhcCHHHhcCCCCCCHHHHhcCHhhc
Confidence 9999999999987 56777888884
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=237.30 Aligned_cols=196 Identities=19% Similarity=0.239 Sum_probs=144.3
Q ss_pred hCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHH
Q 011399 120 LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199 (487)
Q Consensus 120 lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~ 199 (487)
+..+++.+|..+ ..||.||||-||-|++..+.+.||||...-.-.+..+.--.+++.+.-+. .+.|||.+++-.
T Consensus 20 ~k~DPEklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~----~l~HPntieYkg 93 (948)
T KOG0577|consen 20 FKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLR----QLRHPNTIEYKG 93 (948)
T ss_pred ccCCHHHHHHHH--HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHH----hccCCCcccccc
Confidence 356788888888 67999999999999999899999999986443443333334444443222 234666665544
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHH--HHHH
Q 011399 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLV--NTGI 277 (487)
Q Consensus 200 ~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~--~~~i 277 (487)
.|-. .+..|||||||-| +-+|+....+.+.....++ ..+.
T Consensus 94 CyLr-------------------------------------e~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~ga 135 (948)
T KOG0577|consen 94 CYLR-------------------------------------EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGA 135 (948)
T ss_pred eeec-------------------------------------cchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHH
Confidence 3211 1456899999987 7788877777776555544 4667
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH---HcCCCCCC
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY---ALDFLSPD 354 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~ 354 (487)
..||.|||+++.||||+|.||||+++.|.|||+|||.+....+. .+|.|+. .+|+++++ +-|-++.+
T Consensus 136 L~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA--nsFvGTP--------ywMAPEVILAMDEGqYdgk 205 (948)
T KOG0577|consen 136 LQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA--NSFVGTP--------YWMAPEVILAMDEGQYDGK 205 (948)
T ss_pred HHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch--hcccCCc--------cccchhHheeccccccCCc
Confidence 77999999999999999999999999999999999999988775 3455553 34443332 35777899
Q ss_pred CCcchHHHHHHHHHH
Q 011399 355 VDVTPIVPALRNFFD 369 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~ 369 (487)
+|+||+|.+.-++.+
T Consensus 206 vDvWSLGITCIELAE 220 (948)
T KOG0577|consen 206 VDVWSLGITCIELAE 220 (948)
T ss_pred cceeeccchhhhhhh
Confidence 999999988777765
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=233.96 Aligned_cols=248 Identities=15% Similarity=0.110 Sum_probs=154.4
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||+||+|+.+.+|+.||||++++..... ..+. . .+..|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~-----------------------------~------~~~~E 45 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-KDEV-----------------------------A------HTLTE 45 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------H------HHHHH
Confidence 5899999999999998899999999987431110 0000 0 11122
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.+.+..+ +++.+.-...+.......++||||++|++|.+...... ........+..++..++.|||+.|++|||
T Consensus 46 ~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 46 SRVLKNT-----RHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred HHHHHhC-----CCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 2222221 12222111112233456789999999999976543221 22334445667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
|||+|||++.+|.++|+|||+++........ .. ...+.+..++++....+..+.++|+||+|+.+++++++.
T Consensus 121 ikp~NIll~~~~~~kL~DfG~~~~~~~~~~~-~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~-- 192 (328)
T cd05593 121 LKLENLMLDKDGHIKITDFGLCKEGITDAAT-MK-----TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-- 192 (328)
T ss_pred cCHHHeEECCCCcEEEecCcCCccCCCcccc-cc-----cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCC--
Confidence 9999999999999999999998764321110 00 111233344444444455688899999999999999843
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
.|+...+...+...+. .....+ ....++++++.+.+|
T Consensus 193 ~Pf~~~~~~~~~~~~~----~~~~~~---------------------------------------p~~~~~~~~~li~~~ 229 (328)
T cd05593 193 LPFYNQDHEKLFELIL----MEDIKF---------------------------------------PRTLSADAKSLLSGL 229 (328)
T ss_pred CCCCCCCHHHHHHHhc----cCCccC---------------------------------------CCCCCHHHHHHHHHH
Confidence 3443333222221110 000000 113456777788888
Q ss_pred HhhcCcccc-----cccchhhccccc
Q 011399 454 LFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 454 L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
|.+||+.|. +..+.+.|+||+
T Consensus 230 L~~dP~~R~~~~~~~~~~il~h~~~~ 255 (328)
T cd05593 230 LIKDPNKRLGGGPDDAKEIMRHSFFT 255 (328)
T ss_pred cCCCHHHcCCCCCCCHHHHhcCCCcC
Confidence 888888887 556777788774
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=229.69 Aligned_cols=246 Identities=17% Similarity=0.191 Sum_probs=154.2
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||+|+||.||+|++..+|+.||+|+++...... ..+. . .+..|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~---~--------------------------------~~~~E~ 44 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSEV---T--------------------------------HTLAER 44 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---H--------------------------------HHHHHH
Confidence 699999999999999889999999986321100 0000 0 011122
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccCC
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHADP 294 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~Dl 294 (487)
..+.++ +++.+.-...+.......++||||++|++|.+..... .........+..++..++.|+|+.|++|||+
T Consensus 45 ~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDl 119 (312)
T cd05585 45 TVLAQV-----NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119 (312)
T ss_pred HHHHhC-----CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 222211 1222211111222345678999999999998764332 1223344455678889999999999999999
Q ss_pred CCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 295 HPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 295 kp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||+||+++.+|.++|+|||+++...... ....++ .+..++++.......+.++|+||+|+.+++++++.
T Consensus 120 kp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g--------t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~- 190 (312)
T cd05585 120 KPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG--------TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGL- 190 (312)
T ss_pred CHHHeEECCCCcEEEEECcccccCccCCCccccccC--------CcccCCHHHHcCCCCCCccceechhHHHHHHHhCC-
Confidence 9999999999999999999987643221 111122 23333444444444578899999999999999854
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+.......+. ..+.. +....++.+++.+.+
T Consensus 191 -~pf~~~~~~~~~~~~~----~~~~~---------------------------------------~~~~~~~~~~~li~~ 226 (312)
T cd05585 191 -PPFYDENVNEMYRKIL----QEPLR---------------------------------------FPDGFDRDAKDLLIG 226 (312)
T ss_pred -CCcCCCCHHHHHHHHH----cCCCC---------------------------------------CCCcCCHHHHHHHHH
Confidence 3433333222111110 00000 012346778888999
Q ss_pred HHhhcCcccccc---cchhhcccccc
Q 011399 453 LLFKDGRFRHVL---YSPFTINLVDF 475 (487)
Q Consensus 453 ~L~~d~~~r~~~---~~~~~~~~~~~ 475 (487)
||..||..|++. .+.+.|+||.-
T Consensus 227 ~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 227 LLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred HcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 999999999863 56688888853
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=210.16 Aligned_cols=247 Identities=19% Similarity=0.164 Sum_probs=162.3
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.+|+|.|-||.||.|+.+.++-.||+||+....-.. ..+=+.+.+..+.-+.+.||||..++..|.
T Consensus 27 gr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~----~~v~~qlrREiEIqs~L~hpnilrlY~~fh---------- 92 (281)
T KOG0580|consen 27 GRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILK----TQVEHQLRREIEIQSHLRHPNILRLYGYFH---------- 92 (281)
T ss_pred cccccCCccccEeEeeeccCCcEEEEeeeeHHHHHH----hcchhhhhheeEeecccCCccHHhhhhhee----------
Confidence 389999999999999999999999999986431111 011112222222223344666555555433
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH---HhcCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI---ESQGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
+. ...||++||..+|.+...... ..........+..+++.|+.|+|..++
T Consensus 93 --------------d~-------------~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~V 145 (281)
T KOG0580|consen 93 --------------DS-------------KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRV 145 (281)
T ss_pred --------------cc-------------ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCc
Confidence 22 455799999999988765442 223344556777899999999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+||+|+|++.+|.+|++|||.+..-+...|.++|+++.+ .+|++
T Consensus 146 IhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dy------------------l~pEm-------------- 193 (281)
T KOG0580|consen 146 IHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDY------------------LPPEM-------------- 193 (281)
T ss_pred ccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeeccccc------------------CCHhh--------------
Confidence 9999999999999999999999999988877788888887322 22221
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
......+...++|.+|.+++++..+.||+-+......-.--.-+...+| ...+...++.
T Consensus 194 ----v~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p-----------------~~is~~a~dl 252 (281)
T KOG0580|consen 194 ----VEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP-----------------STISGGAADL 252 (281)
T ss_pred ----cCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC-----------------cccChhHHHH
Confidence 0111223334455555555555555555533221111000000001111 2457788999
Q ss_pred HHHHHhhcCcccccccchhhcccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.++|.++|..|...-+.+.|+|.
T Consensus 253 I~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 253 ISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred HHHHhccCccccccHHHHhhhHHH
Confidence 999999999999999999999985
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-26 Score=230.14 Aligned_cols=201 Identities=16% Similarity=0.127 Sum_probs=126.7
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||.||+|++..+|+.||||+++...... ..+..........+.. ...|++++.+.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~--~~~hp~i~~~~~--------------- 63 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDVECTMVERRVLAL--AWEHPFLTHLFC--------------- 63 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHh--ccCCCCccceee---------------
Confidence 5899999999999998889999999987432110 0000000000000000 001222222211
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
+.......++||||++|++|.+..... .........+..++..++.|||+.|++|||
T Consensus 64 ----------------------~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~d 121 (316)
T cd05592 64 ----------------------TFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRD 121 (316)
T ss_pred ----------------------EEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence 122335578999999999997764322 122334445567888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
+||+||+++.+|.++|+|||++......... .. ...+.+..++++.......+.++|+||+|+.+++++.+.
T Consensus 122 lkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~-~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~-- 193 (316)
T cd05592 122 LKLDNVLLDKDGHIKIADFGMCKENMNGEGK-AS-----TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ-- 193 (316)
T ss_pred CCHHHeEECCCCCEEEccCcCCeECCCCCCc-cc-----cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCC--
Confidence 9999999999999999999998764322110 00 111223334444444445678899999999999999743
Q ss_pred CCCCcCcHHH
Q 011399 374 SSVSELNFKT 383 (487)
Q Consensus 374 ~~~~~~~~~~ 383 (487)
.|+...+...
T Consensus 194 ~Pf~~~~~~~ 203 (316)
T cd05592 194 SPFHGEDEDE 203 (316)
T ss_pred CCCCCCCHHH
Confidence 4554444333
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-26 Score=231.61 Aligned_cols=247 Identities=19% Similarity=0.148 Sum_probs=150.7
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||+||+|+++.+|+.||||++.+............+.....++ ....|++++.+.
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~---~~l~hp~iv~~~---------------- 62 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLL---KNVKHPFLVGLH---------------- 62 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHH---hhCCCCCCCCee----------------
Confidence 5899999999999999899999999986431110000000011000000 001122222111
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
. ........++||||++|++|.+...... ........+..++..+|.|||+.|++|||
T Consensus 63 --------------------~-~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~d 121 (323)
T cd05575 63 --------------------Y-SFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRD 121 (323)
T ss_pred --------------------E-EEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence 1 1223456789999999999977643221 12233344567888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+||+|||++.+|.++|+|||++....... ..... +.+..++++....+..+.++|+||+|+.+++++++.
T Consensus 122 ikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 193 (323)
T cd05575 122 LKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC--------GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGL 193 (323)
T ss_pred CCHHHeEECCCCcEEEeccCCCcccccCCCcccccc--------CChhhcChhhhcCCCCCccccccccchhhhhhhcCC
Confidence 99999999999999999999987542211 11111 223334444444455678899999999999999743
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+...+...+.. .+.. +....++..++.+.
T Consensus 194 --~pf~~~~~~~~~~~i~~----~~~~---------------------------------------~~~~~~~~~~~li~ 228 (323)
T cd05575 194 --PPFYSRDTAEMYDNILN----KPLR---------------------------------------LKPNISVSARHLLE 228 (323)
T ss_pred --CCCCCCCHHHHHHHHHc----CCCC---------------------------------------CCCCCCHHHHHHHH
Confidence 34444333332222110 0000 01123566677777
Q ss_pred HHHhhcCccccccc----chhhccccc
Q 011399 452 ELLFKDGRFRHVLY----SPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~r~~~~----~~~~~~~~~ 474 (487)
+||.+||..|.+.. +.+.|+||.
T Consensus 229 ~~l~~~p~~R~~~~~~~~~il~~~~~~ 255 (323)
T cd05575 229 GLLQKDRTKRLGAKDDFLEIKNHVFFS 255 (323)
T ss_pred HHhhcCHHhCCCCCCCHHHHHcCCCcC
Confidence 88888888887763 556677763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-27 Score=215.18 Aligned_cols=291 Identities=18% Similarity=0.173 Sum_probs=190.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEec-----CChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQR-----PGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~-----p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
..||+|.||.|++|+.+.+|+.||+|+.- .+.....-++++++. .+.|.|++.+++.+...
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~----------~lkHenv~nliEic~tk---- 88 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQ----------LLKHENVVNLIEICRTK---- 88 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHH----------HhcchhHHHHHHHHhhc----
Confidence 57999999999999999899999998652 222222222333322 23488888887765432
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH--HhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI--ESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
+ .|. ..+....||||.+|+. +|..+... .+......+.+..++..+|.|+|+
T Consensus 89 -----------------~------Tp~--~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr 142 (376)
T KOG0669|consen 89 -----------------A------TPT--NRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR 142 (376)
T ss_pred -----------------c------CCc--ccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 0 011 1122446899999987 44443221 233455667788899999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH---HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA---RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
..|+|||+||.|+||+.+|.++|+|||+++.++... ...+..-+.+++++.||.+..+ --.++++|+|..||.
T Consensus 143 ~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~----r~yg~~iDiWgAgCi 218 (376)
T KOG0669|consen 143 NKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGD----REYGPPIDIWGAGCI 218 (376)
T ss_pred hhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcc----cccCCcchhHhHHHH
Confidence 999999999999999999999999999998765432 2235556678899999876321 124889999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHH--HHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc-
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYA--LILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT- 440 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~--~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~- 440 (487)
+.+|+++. +-+++-+-.+-+..+..++-.+.-..-|++. .+.+++ .+.|- ......-+..++..
T Consensus 219 maeMwtrs--pimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~si--------e~ePl---~~~~~rkv~n~~kp~ 285 (376)
T KOG0669|consen 219 MAEMWTRS--PIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSI--------ELEPL---PKGQKRKVKNRLKPY 285 (376)
T ss_pred HHHHHccC--ccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhc--------cCCCC---Ccchhhhhhhhcccc
Confidence 99999742 2222323233333344444433322222221 122222 11220 01111112222211
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhcccccccccc-cc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV-CD 481 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~-~~ 481 (487)
-.+++..+.+.++|..||.+|...-+++-|.||..+++| .+
T Consensus 286 ~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~pqan 327 (376)
T KOG0669|consen 286 VKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMPQAN 327 (376)
T ss_pred cCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcchhh
Confidence 237889999999999999999999999999999999998 44
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-27 Score=234.98 Aligned_cols=241 Identities=20% Similarity=0.266 Sum_probs=185.7
Q ss_pred CCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHH
Q 011399 88 ICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE 167 (487)
Q Consensus 88 ~~p~~~~~~l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~ 167 (487)
++...|..+..+-|+..-.+||+++-+. +-+|+|+.|-||+|+++ ++.||||.++ +
T Consensus 102 ~iGk~~s~e~k~qq~e~WeiPFe~IsEL------------------eWlGSGaQGAVF~Grl~--netVAVKKV~----e 157 (904)
T KOG4721|consen 102 MIGKAYSTEHKQQQEELWEIPFEEISEL------------------EWLGSGAQGAVFLGRLH--NETVAVKKVR----E 157 (904)
T ss_pred HhccceeeehhhhhhhhccCCHHHhhhh------------------hhhccCcccceeeeecc--CceehhHHHh----h
Confidence 3556667777777777777777754322 67999999999999996 8999999865 4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEE
Q 011399 168 AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLT 247 (487)
Q Consensus 168 ~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~Lv 247 (487)
.-+.|++-||.+. |+||+.+...+.+ +-..||+
T Consensus 158 lkETdIKHLRkLk----------H~NII~FkGVCtq-------------------------------------sPcyCIi 190 (904)
T KOG4721|consen 158 LKETDIKHLRKLK----------HPNIITFKGVCTQ-------------------------------------SPCYCII 190 (904)
T ss_pred hhhhhHHHHHhcc----------CcceeeEeeeecC-------------------------------------CceeEEe
Confidence 4567777776554 8888777665432 2445899
Q ss_pred EeecCCCCcCcHHHHHhcCCCHHHHHH--HHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH-HHH
Q 011399 248 MEWVEGVKLNEQVAIESQGLKVLDLVN--TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE-ARF 324 (487)
Q Consensus 248 mE~~~G~~L~~~~~~~~~~~~~~~~~~--~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~-~~~ 324 (487)
||||..|.|..+... .....+..++. .+|+.++.|||.+.|||||||.-||||+.+..|||+|||.++.+++. ++.
T Consensus 191 MEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkM 269 (904)
T KOG4721|consen 191 MEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKM 269 (904)
T ss_pred eeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhh
Confidence 999999999887432 23345555554 56888999999999999999999999999999999999999988654 455
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhh--CCCCCChH
Q 011399 325 AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQ--YPFNVPAY 402 (487)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~p~~ 402 (487)
.|+|++ .+|+++++.-.-++.++||||||+.|+||++ ...|..+.+..+++|.+|.-.-. .|...|..
T Consensus 270 SFaGTV--------aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT--~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~G 339 (904)
T KOG4721|consen 270 SFAGTV--------AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLT--GEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDG 339 (904)
T ss_pred hhhhhH--------hhhCHHHhhcCCcccccceehhHHHHHHHHh--cCCCccccchheeEEeccCCcccccCcccCchH
Confidence 566664 3456666677778999999999999999998 45688888888999998865443 34567888
Q ss_pred HHHHHHHH
Q 011399 403 YALILRSL 410 (487)
Q Consensus 403 ~~~l~r~l 410 (487)
|.+++|..
T Consensus 340 fklL~Kqc 347 (904)
T KOG4721|consen 340 FKLLLKQC 347 (904)
T ss_pred HHHHHHHH
Confidence 88888766
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-27 Score=206.19 Aligned_cols=268 Identities=19% Similarity=0.207 Sum_probs=172.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCC-----hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-----IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-----~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|.+|+|++|+.+.+++.||+|..|-+ +....-+++-+++++. |.|++.+.+...
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelk----------hknivrl~dvlh------ 71 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK----------HKNIVRLHDVLH------ 71 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhh----------hcceeehhhhhc------
Confidence 6799999999999999999999999998743 3333333333333332 666666665432
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (487)
.+ ...-||.|||+. +|..+-..-....+ ..+....|+..++.++|+
T Consensus 72 ------------------sd-------------kkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchs 119 (292)
T KOG0662|consen 72 ------------------SD-------------KKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHS 119 (292)
T ss_pred ------------------cC-------------ceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhh
Confidence 11 344599999975 45444221111233 234455777789999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
+++.|||+||+|+||+.+|.+|++|||+++.+.-..+ .+..-+.+++++.|+.+- ....++..+|+||.||.+.|
T Consensus 120 hnvlhrdlkpqnllin~ngelkladfglarafgipvr-cysaevvtlwyrppdvlf----gakly~tsidmwsagcifae 194 (292)
T KOG0662|consen 120 HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLF----GAKLYSTSIDMWSAGCIFAE 194 (292)
T ss_pred hhhhhccCCcceEEeccCCcEEecccchhhhcCCceE-eeeceeeeeeccCcceee----eeehhccchHhhhcchHHHH
Confidence 9999999999999999999999999999987754422 233345567888777642 12234888999999999999
Q ss_pred HHHHhccCCCCcCc----HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHH-HHHhccC
Q 011399 367 FFDDALNSSVSELN----FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYF-AKRLLTD 441 (487)
Q Consensus 367 ~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~-~~~l~~~ 441 (487)
+.+.-.+ -+.+.+ .+.+++.+|....+. +|.- .--|++.....-.+.. -..+...
T Consensus 195 lanagrp-lfpg~dvddqlkrif~~lg~p~ed~---wps~----------------t~lpdyk~yp~ypattswsqivp~ 254 (292)
T KOG0662|consen 195 LANAGRP-LFPGNDVDDQLKRIFRLLGTPTEDQ---WPSM----------------TKLPDYKPYPIYPATTSWSQIVPK 254 (292)
T ss_pred HhhcCCC-CCCCCcHHHHHHHHHHHhCCCcccc---CCcc----------------ccCCCCcccCCccccchHHHHhhh
Confidence 8862211 112222 233333333221111 1110 0113333222211100 0122234
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+...|+.++++|.-+|..|.++..++.|+||.
T Consensus 255 lns~grdllqkll~cnp~qrisaeaalqhpyf~ 287 (292)
T KOG0662|consen 255 LNSTGRDLLQKLLKCNPAQRISAEAALQHPYFS 287 (292)
T ss_pred hcchhHHHHHHHhccCcccccCHHHHhcCcccc
Confidence 567889999999999999999999999999995
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-26 Score=237.24 Aligned_cols=283 Identities=15% Similarity=0.132 Sum_probs=164.6
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|+||.||+|.+..+|+.||+|.... .....++.+++ .+.|+|++++.+.+
T Consensus 94 y~~~--~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~----------~l~HpnIv~~~~~~------ 152 (391)
T PHA03212 94 FSIL--ETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILR----------AINHPSIIQLKGTF------ 152 (391)
T ss_pred cEEE--EEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHH----------hCCCCCCCCEeEEE------
Confidence 5555 779999999999999998999999997532 11122222222 12355555443321
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh 285 (487)
......++|||++.| +|...... ..+.+ ....+..++..||.|+|
T Consensus 153 -------------------------------~~~~~~~lv~e~~~~-~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH 199 (391)
T PHA03212 153 -------------------------------TYNKFTCLILPRYKT-DLYCYLAA-KRNIAICDILAIERSVLRAIQYLH 199 (391)
T ss_pred -------------------------------EECCeeEEEEecCCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 223556899999965 55544322 22233 33445578888999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
++||+||||||+|||++.+|.++|+|||++............+...+..+..||. ...+..++++|+||+|+.++
T Consensus 200 ~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~~~~~DiwSlGvil~ 274 (391)
T PHA03212 200 ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPEL-----LARDPYGPAVDIWSAGIVLF 274 (391)
T ss_pred hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhh-----hcCCCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999987543221111111122233344443 33444578899999999999
Q ss_pred HHHHHhccCC----CC-cCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhh--hhCCCCChHHhHhHHHHHHh
Q 011399 366 NFFDDALNSS----VS-ELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLAL--YADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 366 ~~~~~~~~~~----~~-~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~--~ldP~~~~~~~~~p~~~~~l 438 (487)
+++++..... .. ..+....+..+.......+...|.......... ..+... ...|..+ |.... +
T Consensus 275 elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~-~ 345 (391)
T PHA03212 275 EMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEI--YIGLAKKSSRKPGSR------PLWTN-L 345 (391)
T ss_pred HHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHH--HHHHHhccCCCCCCC------CCHHH-H
Confidence 9997532110 00 011111111121111111111221111111111 001111 1112111 11111 1
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
...++++++.+.+||..||++|.+..+.+.|+||.--+.|
T Consensus 346 -~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 346 -YELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred -hhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 1235678899999999999999999999999999664444
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-27 Score=229.54 Aligned_cols=276 Identities=16% Similarity=0.179 Sum_probs=164.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+.+.+|+.||+|+.+....... . .. +.+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~------------------------------~~------~~~ 52 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA--P------------------------------CT------AIR 52 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc--c------------------------------hh------HHH
Confidence 679999999999999988999999999863311100 0 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ +++++.-..-+.......++||||++| +|.+......... .....+..++..|+.|+|+.|++|
T Consensus 53 E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 126 (288)
T cd07871 53 EVSLLKNL-----KHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILH 126 (288)
T ss_pred HHHHHHhC-----CCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 22222211 122221111112223456899999987 6766533222222 334455678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+|||++.+|.++|+|||++........ .......+..+..||.+. .....+.++|+||+|+.+++++++.
T Consensus 127 ~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~~l~~l~~g~ 201 (288)
T cd07871 127 RDLKPQNLLINEKGELKLADFGLARAKSVPTK-TYSNEVVTLWYRPPDVLL----GSTEYSTPIDMWGVGCILYEMATGR 201 (288)
T ss_pred CCCCHHHEEECCCCCEEECcCcceeeccCCCc-cccCceecccccChHHhc----CCcccCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999876432211 011111223334444331 1123467799999999999999854
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+....+..+.... ....+..+ ......+.....+.|.++. .|.. ......+++.++.+.
T Consensus 202 --~pf~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~dll~ 266 (288)
T cd07871 202 --PMFPGSTVKEELHLIFRLL---GTPTEETW----PGITSNEEFRSYLFPQYRA----QPLI--NHAPRLDTDGIDLLS 266 (288)
T ss_pred --CCCCCCCHHHHHHHHHHHh---CCCChHHh----hccccchhhhccccCccCC----CchH--HhCCCCCHHHHHHHH
Confidence 3444444444433333222 11111111 1111111111222232211 1111 122346789999999
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+||..||.+|.+..+.+.|+||
T Consensus 267 ~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 267 SLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred HhcCcCcccCCCHHHHhcCCCC
Confidence 9999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-26 Score=231.96 Aligned_cols=248 Identities=15% Similarity=0.104 Sum_probs=151.6
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||.||+|+.+.+|+.||+|+++...... ..+. ..+......+....|++++.+.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---~~~~~E~~~l~~l~hp~i~~~~~--------------- 62 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEV---AHTVTESRVLQNTRHPFLTALKY--------------- 62 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHH---HHHHHHHHHHHhCCCCCCcceee---------------
Confidence 5899999999999998899999999987432110 0000 00000011111112333332222
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
........++||||++|++|.+...... ........+..++..++.|||++|++|||
T Consensus 63 ----------------------~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 120 (323)
T cd05595 63 ----------------------AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120 (323)
T ss_pred ----------------------EEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 1123356789999999999976543221 22334445567888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
+||.|||++.+|.++|+|||++......... .. ...+.+..++++....+..+.++|+||+|+.+++++++.
T Consensus 121 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~-- 192 (323)
T cd05595 121 IKLENLMLDKDGHIKITDFGLCKEGISDGAT-MK-----TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-- 192 (323)
T ss_pred CCHHHEEEcCCCCEEecccHHhccccCCCCc-cc-----cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCC--
Confidence 9999999999999999999998753221100 00 011223334444444455678899999999999999843
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
.|+...+.......+.. ...+ .....++.+++.+.+|
T Consensus 193 ~Pf~~~~~~~~~~~~~~-------------------------------~~~~------------~p~~~~~~~~~li~~~ 229 (323)
T cd05595 193 LPFYNQDHERLFELILM-------------------------------EEIR------------FPRTLSPEAKSLLAGL 229 (323)
T ss_pred CCCCCCCHHHHHHHHhc-------------------------------CCCC------------CCCCCCHHHHHHHHHH
Confidence 34433332222211110 0000 0112456777777888
Q ss_pred HhhcCcccc-----cccchhhccccc
Q 011399 454 LFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 454 L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
|.+||..|+ +..+.+.|+||.
T Consensus 230 L~~dP~~R~~~~~~~~~~~l~h~~~~ 255 (323)
T cd05595 230 LKKDPKQRLGGGPSDAKEVMEHRFFL 255 (323)
T ss_pred ccCCHHHhCCCCCCCHHHHHcCCCcC
Confidence 888888887 555666777774
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-27 Score=236.33 Aligned_cols=262 Identities=19% Similarity=0.180 Sum_probs=171.5
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
..+.|.-. +.||.|.||+||+|+.+.+|+.+|+|++.+.....-. +. .
T Consensus 33 ~~~~Y~l~--~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~-~~-----------------------------~ 80 (382)
T KOG0032|consen 33 IKEKYELG--RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE-DR-----------------------------E 80 (382)
T ss_pred ccccEEeh--hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc-cH-----------------------------H
Confidence 34444444 6799999999999999989999999999644221100 00 0
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (487)
+..+|.+.+.++.. +...+.++.+| +.....++|||+|+||.|.+.+......+.....+..++..+++|
T Consensus 81 ------~v~~Ev~il~~l~~---hpniv~l~~~~-e~~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~ 150 (382)
T KOG0032|consen 81 ------DVRREVAILQQLSG---HPNIVQLKDAF-EDPDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKY 150 (382)
T ss_pred ------HHHHHHHHHHhccC---CCCEEEEEEEE-EcCCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 11222222222211 11223333333 234567899999999999887543323444555667889999999
Q ss_pred HHHCCccccCCCCCCeEEcCC----CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 284 LLEYGYFHADPHPGNLLATPE----GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~----g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
+|+.|++|||+||+|+|+... +.++++|||++.......+ +. ...+.++.++++.....-+++.+|+||
T Consensus 151 lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~--~~-----~~~Gtp~y~APEvl~~~~y~~~~DiWS 223 (382)
T KOG0032|consen 151 LHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGER--LH-----TIVGTPEYVAPEVLGGRPYGDEVDVWS 223 (382)
T ss_pred HHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCce--Ee-----eecCCccccCchhhcCCCCCcccchhH
Confidence 999999999999999999733 5799999999998876311 11 223345555566655445588999999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+|+.++.++.++ .|+...+-......+. . .+++|. ..-.
T Consensus 224 ~Gvi~yiLL~G~--~PF~~~~~~~~~~~i~---~--------------------------~~~~f~----------~~~w 262 (382)
T KOG0032|consen 224 IGVILYILLSGV--PPFWGETEFEIFLAIL---R--------------------------GDFDFT----------SEPW 262 (382)
T ss_pred HHHHHHHHhhCC--CCCcCCChhHHHHHHH---c--------------------------CCCCCC----------CCCc
Confidence 999999988754 3444333222221111 0 111111 0111
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.+.+..+++++..+|..||..|.+..+.+.|||..-
T Consensus 263 ~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~ 298 (382)
T KOG0032|consen 263 DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKS 298 (382)
T ss_pred cccCHHHHHHHHHhcccCcccCCCHHHHhcCccccC
Confidence 245788899999999999999999999999999864
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-27 Score=217.87 Aligned_cols=267 Identities=14% Similarity=0.187 Sum_probs=180.5
Q ss_pred hhcccCC-cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 127 IFSSISP-SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 127 ~f~~~~~-~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
.|...++ +.+|.|..+.|-++.++.+|.++|+|++.-..... ...+. .++.+..
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~---------------------~~e~~----~~~~EaT 69 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTE---------------------SGETP----YEMREAT 69 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEeccccc---------------------CCccH----HHHHHHH
Confidence 3444443 67999999999999999999999999985332111 01121 2222233
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~l 284 (487)
.+|++.++ ...++++|.--.-+.+..+-.++|.|.|+.|.|.|+.... ..++...+.+++++..++.|+
T Consensus 70 ~~Ev~ILR----------qv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeyl 139 (411)
T KOG0599|consen 70 RQEISILR----------QVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYL 139 (411)
T ss_pred HHHHHHHH----------HhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHH
Confidence 34443332 2233444332222233345567999999999999985432 334556778889999999999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
|..+|+|||+||+|||++++.+++|.|||.+.++.+..+ ..+||+ .||.+|++ +.|.
T Consensus 140 Ha~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGT------------------PgYLAPEt----ikC~ 197 (411)
T KOG0599|consen 140 HARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGT------------------PGYLAPET----IKCS 197 (411)
T ss_pred HHhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCC------------------CcccChhh----eeee
Confidence 999999999999999999999999999999999987654 335554 44444443 1222
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH--HHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL--TVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l--~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
++ ..-.+++...+.|+.|.+++....+.||++-.=.-.+ ++.+|-...-.|.+. +
T Consensus 198 m~--------e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWa---------------d 254 (411)
T KOG0599|consen 198 MY--------ENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWA---------------D 254 (411)
T ss_pred cc--------cCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchh---------------h
Confidence 11 2334556666777777777777778888764211111 133554444444432 4
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+...++.+.++|..||.+|.+..+++.|+||
T Consensus 255 is~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 255 ISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred ccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 56778899999999999999999999999999
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-26 Score=229.77 Aligned_cols=189 Identities=18% Similarity=0.169 Sum_probs=123.1
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||.||+|+++.+|+.||+|++.............+++....++ ....|++++.+.
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l---~~~~h~~Iv~~~---------------- 62 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLL---KNVKHPFLVGLH---------------- 62 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHH---HhCCCCCCCcee----------------
Confidence 5999999999999999889999999986421111000011111110000 001122222211
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.+.......++||||++|++|.+...... ........+..++..+|.|+|+.|++|||
T Consensus 63 ---------------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrD 121 (325)
T cd05602 63 ---------------------FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRD 121 (325)
T ss_pred ---------------------EEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 12223456789999999999987643321 12233445667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|||+|||++.+|.++|+|||+++...... ..... +.+..++++....+..+.++|+||+|+.+++++.+.
T Consensus 122 lkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (325)
T cd05602 122 LKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC--------GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred CCHHHeEECCCCCEEEccCCCCcccccCCCCccccc--------CCccccCHHHHcCCCCCCccccccccHHHHHHhcCC
Confidence 99999999999999999999987642211 11111 233344444444555678899999999999999743
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-26 Score=231.70 Aligned_cols=294 Identities=15% Similarity=0.176 Sum_probs=171.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+|+.||||+......... .....++.+ ..+....|+|++.+++.+...
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~E~----~~l~~l~h~niv~~~~~~~~~--------- 88 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT-HAKRAYREL----VLMKCVNHKNIISLLNVFTPQ--------- 88 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChH-HHHHHHHHH----HHHHHhCCCchhceeeeeecc---------
Confidence 789999999999999988899999998864321110 000111111 111123366666665532110
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
-..+.....++||||++++ +.+... ..........+..++..||.|||+.|++|||
T Consensus 89 ----------------------~~~~~~~~~~lv~e~~~~~-l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrD 144 (355)
T cd07874 89 ----------------------KSLEEFQDVYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRD 144 (355)
T ss_pred ----------------------ccccccceeEEEhhhhccc-HHHHHh-hcCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 0001113458999999874 433321 1222223345667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
+||+||+++.+|.++|+|||+++........ .....+..+..||.+ ...-.++++|+||+|+.+++++++.
T Consensus 145 ikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~t~~y~aPE~~-----~~~~~~~~~DiwslG~il~el~~g~-- 215 (355)
T cd07874 145 LKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRYYRAPEVI-----LGMGYKENVDIWSVGCIMGEMVRHK-- 215 (355)
T ss_pred CChHHEEECCCCCEEEeeCcccccCCCcccc--CCccccCCccCHHHH-----cCCCCCchhhHHHHHHHHHHHHhCC--
Confidence 9999999999999999999999876543210 011112233444433 3334577899999999999999854
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH-------hccCCCHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR-------LLTDPNPYL 446 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~-------l~~~~~p~~ 446 (487)
.++...+...... ..+.......|.....+....... ..-.|.+.-..... ..... .....+..+
T Consensus 216 ~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T cd07874 216 ILFPGRDYIDQWN---KVIEQLGTPCPEFMKKLQPTVRNY----VENRPKYAGLTFPK-LFPDSLFPADSEHNKLKASQA 287 (355)
T ss_pred CCCCCCCHHHHHH---HHHHHhCCCCHHHHHhhcHHHHHH----HhcCCccccccchh-hccccccccccccccccchHH
Confidence 3444444333222 222222222333222211111100 00112111100000 00000 011235678
Q ss_pred HHHHHHHHhhcCcccccccchhhccccccccccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCDI 482 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~ 482 (487)
++.+.+||..||.+|++..+.+.|+||..-+.++++
T Consensus 288 ~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~~~~ 323 (355)
T cd07874 288 RDLLSKMLVIDPAKRISVDEALQHPYINVWYDPAEV 323 (355)
T ss_pred HHHHHHHhcCCchhcCCHHHHhcCcchhcccChhhc
Confidence 999999999999999999999999999866555543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-26 Score=234.91 Aligned_cols=202 Identities=17% Similarity=0.196 Sum_probs=129.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+++...... ......+.+|.+.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------~~~~~~~~~E~~i-- 54 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLE------------------------------KEQVAHVRAERDI-- 54 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhh------------------------------hhHHHHHHHHHHH--
Confidence 67999999999999999899999999986321000 0000111112211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
+..+ +++. ++.++ .......++||||++|++|.++..... ........+..++..+|.|+|+.|++
T Consensus 55 ----l~~l-----~h~~--iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~iv 123 (364)
T cd05599 55 ----LAEA-----DNPW--VVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYI 123 (364)
T ss_pred ----HHhC-----CCCC--CcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 1111 1222 22222 223456789999999999988743321 22334556678889999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHH-------------------------HH-------HHHHHhcCH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII-------------------------GH-------VVHMVNRDY 338 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~-------------------------~~-------~~~~~~~~~ 338 (487)
||||||+|||++.+|.++|+|||++..+......... .. ......+.+
T Consensus 124 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 203 (364)
T cd05599 124 HRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTP 203 (364)
T ss_pred eccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCc
Confidence 9999999999999999999999998765322110000 00 000011334
Q ss_pred HHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc
Q 011399 339 EAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN 380 (487)
Q Consensus 339 ~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~ 380 (487)
..+++++...+..+.++|+||+|+.+++++++. .|+...+
T Consensus 204 ~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~--~Pf~~~~ 243 (364)
T cd05599 204 DYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY--PPFCSDN 243 (364)
T ss_pred cccCHHHHcCCCCCCeeeeecchhHHHHhhcCC--CCCCCCC
Confidence 445555555555678899999999999999854 3444333
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-26 Score=234.78 Aligned_cols=201 Identities=14% Similarity=0.127 Sum_probs=126.6
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|..+ +.||+|+||+||+|+++.+|+.||||+++...... ......+..
T Consensus 3 f~~~--~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~------------------------------~~~~~~~~~ 50 (381)
T cd05626 3 FVKI--KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN------------------------------RNQVAHVKA 50 (381)
T ss_pred ceEE--EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh------------------------------hHHHHHHHH
Confidence 4444 67999999999999999899999999986321000 000011112
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
|...+.++ +++.+.-..-+.......++||||++|++|.++..... ........+..++..++.|+|.
T Consensus 51 ------E~~il~~l-----~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~ 119 (381)
T cd05626 51 ------ERDILAEA-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHK 119 (381)
T ss_pred ------HHHHHHhc-----CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 22211111 12222211112223456789999999999987743221 2233445566788899999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH---------------------------------H------
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI---------------------------------I------ 327 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~---------------------------------~------ 327 (487)
.||+||||||+|||++.+|.++|+|||++..+........ .
T Consensus 120 ~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (381)
T cd05626 120 MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQ 199 (381)
T ss_pred CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccc
Confidence 9999999999999999999999999999764421100000 0
Q ss_pred --HHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 328 --GHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 328 --~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
........+.+..++++.......+.++|+||+|+.+++++++.
T Consensus 200 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~ 245 (381)
T cd05626 200 HQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQ 245 (381)
T ss_pred ccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCC
Confidence 00000112334444555444444578899999999999999854
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-26 Score=232.02 Aligned_cols=258 Identities=16% Similarity=0.135 Sum_probs=160.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+...+|+.||||+++...... ..+...++ .....+....|++++.+.+.+.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~---~e~~~l~~~~~~~i~~~~~~~~----------- 71 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK-RNQIAHVR---AERDILADADSPWIVKLYYSFQ----------- 71 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh-ccHHHHHH---HHHHHHHhcCCCCccchhhhee-----------
Confidence 67999999999999999899999999987431110 00111111 1111111223455554443221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
.....++||||++|++|.++.... .........+..++..+|.|+|..|++||
T Consensus 72 --------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~ 125 (350)
T cd05573 72 --------------------------DEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHR 125 (350)
T ss_pred --------------------------cCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 124568999999999998875433 22233445566788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-----------------------HHHHHHHHHhcCHHHHHHHHHHcC
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-----------------------IIGHVVHMVNRDYEAMARDYYALD 349 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~g 349 (487)
||||+|||++.+|.++|+|||++..+....... ..........+++..++++....+
T Consensus 126 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 205 (350)
T cd05573 126 DIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT 205 (350)
T ss_pred CCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence 999999999999999999999998765432000 000000111233444455555555
Q ss_pred CCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHh
Q 011399 350 FLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA 429 (487)
Q Consensus 350 ~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~ 429 (487)
..++++|+||+|+.+++++++. .|+...+.......+... ...... |..
T Consensus 206 ~~~~~~DiwSlG~il~ell~g~--~Pf~~~~~~~~~~~i~~~--~~~~~~----------------------p~~----- 254 (350)
T cd05573 206 PYGLECDWWSLGVILYEMLYGF--PPFYSDTLQETYNKIINW--KESLRF----------------------PPD----- 254 (350)
T ss_pred CCCCceeeEecchhhhhhccCC--CCCCCCCHHHHHHHHhcc--CCcccC----------------------CCC-----
Confidence 6688999999999999999753 344433322221111100 000000 100
Q ss_pred HhHHHHHHhccCCCHHHHHHHHHHHhhcCccccc-ccchhhccccc
Q 011399 430 SYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHV-LYSPFTINLVD 474 (487)
Q Consensus 430 ~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~-~~~~~~~~~~~ 474 (487)
...++.+++.+.+||. ||..|++ ..+.+.|+||.
T Consensus 255 ----------~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~ 289 (350)
T cd05573 255 ----------PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFK 289 (350)
T ss_pred ----------CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcC
Confidence 0136777888888886 8888888 77888888884
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-26 Score=232.35 Aligned_cols=248 Identities=14% Similarity=0.113 Sum_probs=152.4
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||+||+|+.+.+|+.||+|++++...... .+. . .+..|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~-~~~-----------------------------~------~~~~e 45 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-DEV-----------------------------A------HTLTE 45 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-hHH-----------------------------H------HHHHH
Confidence 58999999999999988999999999874311100 000 0 01112
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH-CCcccc
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE-YGYFHA 292 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~givH~ 292 (487)
.+.+..+ .++.+.-...........++||||++|++|.+...... ........+..+++.++.|||+ .|++||
T Consensus 46 ~~~l~~~-----~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr 120 (325)
T cd05594 46 NRVLQNS-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120 (325)
T ss_pred HHHHHhC-----CCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 2222211 12222111112233456799999999999976643221 2223344556788899999997 799999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.++|+|||++......... ... ..+.+..++++....+..+.++|+||+|+.+++++++.
T Consensus 121 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-~~~-----~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~- 193 (325)
T cd05594 121 DLKLENLMLDKDGHIKITDFGLCKEGIKDGAT-MKT-----FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR- 193 (325)
T ss_pred CCCCCeEEECCCCCEEEecCCCCeecCCCCcc-ccc-----ccCCcccCCHHHHccCCCCCccccccccceeeeeccCC-
Confidence 99999999999999999999998753221100 000 11223334444444555688999999999999998743
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+.......+. ...... ....++++++.+.+
T Consensus 194 -~Pf~~~~~~~~~~~i~----~~~~~~---------------------------------------p~~~~~~~~~li~~ 229 (325)
T cd05594 194 -LPFYNQDHEKLFELIL----MEEIRF---------------------------------------PRTLSPEAKSLLSG 229 (325)
T ss_pred -CCCCCCCHHHHHHHHh----cCCCCC---------------------------------------CCCCCHHHHHHHHH
Confidence 3333333222211110 000000 11245677778888
Q ss_pred HHhhcCcccc-----cccchhhccccc
Q 011399 453 LLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
||.+||..|+ +..+.+.|+||.
T Consensus 230 ~L~~dP~~R~~~~~~~~~~il~h~~~~ 256 (325)
T cd05594 230 LLKKDPKQRLGGGPDDAKEIMQHKFFA 256 (325)
T ss_pred HhhcCHHHhCCCCCCCHHHHhcCCCcC
Confidence 8888888887 566777777774
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-26 Score=233.04 Aligned_cols=257 Identities=16% Similarity=0.155 Sum_probs=159.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||++.......... .+...++.+....|+|++.+.+.
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~------~~~~E~~~l~~l~h~~iv~~~~~------------- 140 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRR------QICREIEILRDVNHPNVVKCHDM------------- 140 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHH------HHHHHHHHHHhCCCCCcceeeeE-------------
Confidence 67999999999999998899999999986542221111 11111111112224444443332
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
....+..++||||++|++|.+... ........+..++..+|.|||+.|++|||
T Consensus 141 ------------------------~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~ivHrD 193 (353)
T PLN00034 141 ------------------------FDHNGEIQVLLEFMDGGSLEGTHI---ADEQFLADVARQILSGIAYLHRRHIVHRD 193 (353)
T ss_pred ------------------------eccCCeEEEEEecCCCCccccccc---CCHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence 222356689999999999865321 11122334567888899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
|||+|||++.++.++|+|||++..+...... ......+..+..||.+......-.+.+.++|+||+|+.+++++.+..
T Consensus 194 lkp~NIll~~~~~~kL~DfG~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~- 271 (353)
T PLN00034 194 IKPSNLLINSAKNVKIADFGVSRILAQTMDP-CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRF- 271 (353)
T ss_pred CCHHHEEEcCCCCEEEcccccceeccccccc-ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCC-
Confidence 9999999999999999999999876432110 00111122233344332211112234567999999999999987433
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
++...... .+..+.... .....+. .....++++++.+.+|
T Consensus 272 -pf~~~~~~-------------------~~~~~~~~~------~~~~~~~--------------~~~~~~~~l~~li~~~ 311 (353)
T PLN00034 272 -PFGVGRQG-------------------DWASLMCAI------CMSQPPE--------------APATASREFRHFISCC 311 (353)
T ss_pred -CCCCCCCc-------------------cHHHHHHHH------hccCCCC--------------CCCccCHHHHHHHHHH
Confidence 22211100 010000000 0000011 0113467889999999
Q ss_pred HhhcCcccccccchhhccccccccc
Q 011399 454 LFKDGRFRHVLYSPFTINLVDFEFV 478 (487)
Q Consensus 454 L~~d~~~r~~~~~~~~~~~~~~~~~ 478 (487)
|..||..|++..+.+.|+||.-...
T Consensus 312 l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 312 LQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred ccCChhhCcCHHHHhcCcccccCCc
Confidence 9999999999999999999976643
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-26 Score=228.63 Aligned_cols=245 Identities=17% Similarity=0.153 Sum_probs=153.1
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||.||+|+++.+|+.||||++++..... ..+... ...|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~-----------------------------------~~~e 45 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVEC-----------------------------------TMVE 45 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHH-----------------------------------HHHH
Confidence 5899999999999999899999999987432110 000000 0111
Q ss_pred HHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 215 GQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
...+. ...+++. ++.++ ....+..++||||++|++|.+..... .........+..++..++.|+|+.|++|
T Consensus 46 ~~~l~----~~~~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 119 (316)
T cd05620 46 KRVLA----LAWENPF--LTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIY 119 (316)
T ss_pred HHHHH----hccCCCC--ccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 11111 0112222 22222 23345678999999999997764322 1222334455678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
||+||+||+++.+|.++|+|||+++..... ..... .+++..++++.+..+..++++|+||+|+.++++++
T Consensus 120 rDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~--------~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~ 191 (316)
T cd05620 120 RDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTF--------CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLI 191 (316)
T ss_pred cCCCHHHeEECCCCCEEeCccCCCeecccCCCceecc--------CCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHh
Confidence 999999999999999999999998753211 11111 12333444445444556788999999999999997
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .|+...+...+...+.. ..|.+ ....++++++.
T Consensus 192 g~--~Pf~~~~~~~~~~~~~~-----------------------------~~~~~--------------~~~~~~~~~~l 226 (316)
T cd05620 192 GQ--SPFHGDDEDELFESIRV-----------------------------DTPHY--------------PRWITKESKDI 226 (316)
T ss_pred CC--CCCCCCCHHHHHHHHHh-----------------------------CCCCC--------------CCCCCHHHHHH
Confidence 43 34443333222211100 01111 01235677788
Q ss_pred HHHHHhhcCcccccccch-hhccccc
Q 011399 450 LVELLFKDGRFRHVLYSP-FTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~-~~~~~~~ 474 (487)
+.+||..||+.|.+..+. ..|+||.
T Consensus 227 i~~~l~~dP~~R~~~~~~~~~h~~f~ 252 (316)
T cd05620 227 LEKLFERDPTRRLGVVGNIRGHPFFK 252 (316)
T ss_pred HHHHccCCHHHcCCChHHHHcCCCcC
Confidence 888888888888887543 3588874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-26 Score=227.63 Aligned_cols=189 Identities=18% Similarity=0.167 Sum_probs=122.8
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||+||+|++..+|+.||+|++.......-......++....++ ....|++++.+.+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l---~~~~h~~iv~~~~--------------- 63 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLL---KNLKHPFLVGLHY--------------- 63 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHH---HhCCCCCccceee---------------
Confidence 5899999999999998899999999986432111011111111111111 1112333333221
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
+.......++||||++|++|.+..... .........+..++..+|.|||..|++|||
T Consensus 64 ----------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~D 121 (321)
T cd05603 64 ----------------------SFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRD 121 (321)
T ss_pred ----------------------EEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 112235678999999999997653322 122333445667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|||+||+++.+|.++|+|||++...... ...... +.+..++++.+.....+.+.|+||+|+.+++++++.
T Consensus 122 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (321)
T cd05603 122 LKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC--------GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGL 193 (321)
T ss_pred CCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc--------CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCC
Confidence 9999999999999999999998753211 111111 223334444444455678899999999999998743
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-26 Score=227.79 Aligned_cols=238 Identities=16% Similarity=0.171 Sum_probs=166.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.+|.|+||.++.++++.+++.+|+|.++-.....-.++ .. .....++ ....|||++++.+.|...
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~-~A-~~E~~li---s~~~hP~iv~y~ds~~~~--------- 75 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERR-SA-IQEMDLL---SKLLHPNIVEYKDSFEED--------- 75 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhH-HH-HHHHHHH---HhccCCCeeeeccchhcC---------
Confidence 679999999999999999999999999863321111111 00 1111111 123488888777765432
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCC-ceEEEeecCCCCcCcHHHHHh-cCCCHHHHHH--HHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSG-KVLTMEWVEGVKLNEQVAIES-QGLKVLDLVN--TGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~-~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~--~~i~~~l~~lh~~gi 289 (487)
+. .+|||+||+||++.+.+...+ ..+...++.. .|+..++.|||+.+|
T Consensus 76 ----------------------------~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~i 127 (426)
T KOG0589|consen 76 ----------------------------GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRV 127 (426)
T ss_pred ----------------------------CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhh
Confidence 44 689999999999998865544 3345555544 556679999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+|+.|||++.++.|+|.|||+++.+.++.. ++. .+-++|.++.+++.+---...+.|+||+||+++|+++
T Consensus 128 LHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~--~a~----tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~ 201 (426)
T KOG0589|consen 128 LHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS--LAS----TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCT 201 (426)
T ss_pred hcccchhhhhhccccCceeecchhhhhhcCCchh--hhh----eecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHh
Confidence 9999999999999999999999999999987741 121 2223444454555433334789999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA 428 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~ 428 (487)
+..++.+.++..++..+....+ -.+.....++..+++++ ...+|..++.+
T Consensus 202 --lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~-------l~~~P~~RPsa 252 (426)
T KOG0589|consen 202 --LKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSM-------LRKNPEHRPSA 252 (426)
T ss_pred --cccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHH-------hhcCCccCCCH
Confidence 6678899999888877766552 22333445555555555 55677776644
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=229.26 Aligned_cols=190 Identities=18% Similarity=0.171 Sum_probs=122.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||+|+++...... ..+...+......+... ..|++++.+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~~--~~hp~iv~~~~-------------- 63 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND-DEDIDWVQTEKHVFEQA--SNHPFLVGLHS-------------- 63 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc-hhHHHHHHHHHHHHHhc--CCCCcCCceee--------------
Confidence 35999999999999999899999999987432111 00111000000000000 01222222221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+....+..++||||++|++|.+..... .........+..++..++.|+|+.|++||
T Consensus 64 -----------------------~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05618 64 -----------------------CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120 (329)
T ss_pred -----------------------EEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence 122345678999999999997653322 12233444566788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||+||+++.+|.++|+|||+++..... ...... +.+..++++....+..+.++|+||+|+.+++++++
T Consensus 121 Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (329)
T cd05618 121 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC--------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 192 (329)
T ss_pred CCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc--------CCccccCHHHHcCCCCCCccceecccHHHHHHhhC
Confidence 99999999999999999999998753211 111112 22333444444445567889999999999999985
Q ss_pred h
Q 011399 371 A 371 (487)
Q Consensus 371 ~ 371 (487)
.
T Consensus 193 ~ 193 (329)
T cd05618 193 R 193 (329)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=230.65 Aligned_cols=257 Identities=17% Similarity=0.136 Sum_probs=155.2
Q ss_pred cccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|+.. .+|+.||+|+.+......... ..+.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~-----------------------------~~~~------ 50 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAK-----------------------------TVEH------ 50 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhh-----------------------------HHHH------
Confidence 67999999999999864 368999999986321100000 0011
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
+..|...+.+ +.+++.+....-+.......++||||++|++|.+..... .........+..++..+|.|+|+.|+
T Consensus 51 ~~~e~~~l~~----l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 126 (332)
T cd05614 51 TRTERNVLEH----VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGI 126 (332)
T ss_pred HHHHHHHHHh----ccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 1112222221 222333322222233345678999999999997764322 12233344556788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcchHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~Di~sl~~~l~~~~ 368 (487)
+||||||+|||++.+|.++|+|||++..+........... .+.+..++++.... ...+...|+||+|+.+++++
T Consensus 127 vHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 201 (332)
T cd05614 127 VYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSF-----CGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELL 201 (332)
T ss_pred EecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccc-----cCCccccCHHHhcCCCCCCCccccccchhhhhhhh
Confidence 9999999999999999999999999986533211110111 12233333433322 23467899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
++.. ++...+....... +.+.. ...+|.+ ....++.+++
T Consensus 202 tg~~--pf~~~~~~~~~~~------------------~~~~~-------~~~~~~~--------------~~~~~~~~~~ 240 (332)
T cd05614 202 TGAS--PFTLEGERNTQSE------------------VSRRI-------LKCDPPF--------------PSFIGPEAQD 240 (332)
T ss_pred cCCC--CCCCCCCCCCHHH------------------HHHHH-------hcCCCCC--------------CCCCCHHHHH
Confidence 7532 2221110000000 00000 0112211 1134677888
Q ss_pred HHHHHHhhcCcccc-----cccchhhcccccc
Q 011399 449 ALVELLFKDGRFRH-----VLYSPFTINLVDF 475 (487)
Q Consensus 449 ~l~~~L~~d~~~r~-----~~~~~~~~~~~~~ 475 (487)
.+.+||..||..|+ +..+.+.|+||.-
T Consensus 241 li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 241 LLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred HHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 99999999999999 5568889999853
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=222.33 Aligned_cols=197 Identities=19% Similarity=0.153 Sum_probs=125.8
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||+||+|+.+.+|+.||||+.+...... ..+.. . +..|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~-----------------------------~------~~~e 45 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDDVD-----------------------------C------TMTE 45 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhHHH-----------------------------H------HHHH
Confidence 5899999999999998889999999986431110 00000 0 0111
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.+.+. ...+++.+....-+.......++||||++|++|.+..... .........+..++..++.|||+.|++|||
T Consensus 46 ~~il~----~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 121 (321)
T cd05591 46 KRILA----LAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRD 121 (321)
T ss_pred HHHHH----hccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 11111 1112222211111222345678999999999997664322 122233445567888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+||+||+++.+|.++|+|||++...... ...... +.+..++++.......++++|+||+|+.+++++++.
T Consensus 122 ikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~ 193 (321)
T cd05591 122 LKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC--------GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ 193 (321)
T ss_pred CCHHHeEECCCCCEEEeecccceecccCCccccccc--------cCccccCHHHHcCCCCCCccceechhHHHHHHhcCC
Confidence 9999999999999999999998754221 111111 223334444444445578899999999999999843
Q ss_pred ccCCCCcCcH
Q 011399 372 LNSSVSELNF 381 (487)
Q Consensus 372 ~~~~~~~~~~ 381 (487)
.|+...+.
T Consensus 194 --~Pf~~~~~ 201 (321)
T cd05591 194 --PPFEADNE 201 (321)
T ss_pred --CCCCCCCH
Confidence 35544443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-26 Score=234.30 Aligned_cols=286 Identities=17% Similarity=0.142 Sum_probs=169.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+|+.||||+........ ...+.+.+.+..+....|+|++.+.+.+...
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------- 71 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL-----VSCKRVFRELKMLCFFKHDNVLSALDILQPP--------- 71 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccch-----HHHHHHHHHHHHHHhCCCCCcCCHhheecCC---------
Confidence 67999999999999998899999999885432111 1111122222222234477777766643211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
. . ......++||||+.+ +|.+.... ..........+..++..+|.|+|+.|++||
T Consensus 72 ---------------~------~--~~~~~~~lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~ 127 (372)
T cd07853 72 ---------------H------I--DPFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 127 (372)
T ss_pred ---------------C------c--cccceEEEEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 0 0 001245899999975 55443211 112233345566788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.++|+|||++................+..+..||.+. .....+.+.|+||+|+.+++++++.
T Consensus 128 dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~il~el~~g~- 202 (372)
T cd07853 128 DIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILM----GSRHYTSAVDIWSVGCIFAELLGRR- 202 (372)
T ss_pred CCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHc----CCCCCCcHHHHHhHHHHHHHHHcCC-
Confidence 99999999999999999999998765432111111111122234444331 1123467889999999999999743
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhh--CCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYA--DPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~l--dP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
.++...+....+..+...+ ....+..+.... ++....+ .|..... .+. ...+....++++++.+
T Consensus 203 -~pf~~~~~~~~~~~i~~~~---g~~~~~~~~~~~------~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~li 268 (372)
T cd07853 203 -ILFQAQSPIQQLDLITDLL---GTPSLEAMRSAC------EGARAHILRGPHKPPS---LPV-LYTLSSQATHEAVHLL 268 (372)
T ss_pred -CCCCCCCHHHHHHHHHHHc---CCCCHHHHHHhh------HHHHHHHHhCCCCCCc---hHH-hcccCCCCCHHHHHHH
Confidence 4555444433333332221 111111111111 1111000 1110000 000 0012234578999999
Q ss_pred HHHHhhcCcccccccchhhccccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.+||..||++|++..+.+.|+||.-.
T Consensus 269 ~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 269 CRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 99999999999999999999999653
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.3e-26 Score=229.51 Aligned_cols=287 Identities=15% Similarity=0.169 Sum_probs=167.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+++.||||++......... ....++.+ ..+....|+|++.+++.+...
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~E~----~~l~~l~h~~ii~~~~~~~~~--------- 95 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYREL----VLMKCVNHKNIIGLLNVFTPQ--------- 95 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchh-HHHHHHHH----HHHHhcCCCCccccceeeccc---------
Confidence 7899999999999999889999999998643211100 00111111 111123356665554432110
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
-........++||||+++ ++.+... ..........+..++..||.|+|+.|++|||
T Consensus 96 ----------------------~~~~~~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 151 (364)
T cd07875 96 ----------------------KSLEEFQDVYIVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151 (364)
T ss_pred ----------------------ccccccCeEEEEEeCCCC-CHHHHHH-hcCCHHHHHHHHHHHHHHHHHHhhCCeecCC
Confidence 000111345899999987 4443321 1222233345667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
+||+||+++.+|.++|+|||+++........ .....+..+..||.+ .....++++|+||+|+.+++++++.
T Consensus 152 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~--~~~~~t~~y~aPE~~-----~~~~~~~~~DiwSlG~il~ell~g~-- 222 (364)
T cd07875 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRYYRAPEVI-----LGMGYKENVDIWSVGCIMGEMIKGG-- 222 (364)
T ss_pred CCHHHEEECCCCcEEEEeCCCccccCCCCcc--cCCcccCCcCCHHHH-----hCCCCCchhhHHhHHHHHHHHHhCC--
Confidence 9999999999999999999999876433110 011112233444443 3344578899999999999999853
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH-------hccCCCHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR-------LLTDPNPYL 446 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~-------l~~~~~p~~ 446 (487)
.++...+....... ++.......| .+...+..... .. ..-.|.+.-.... ...... .....+..+
T Consensus 223 ~pf~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~--~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 294 (364)
T cd07875 223 VLFPGTDHIDQWNK---VIEQLGTPCP-EFMKKLQPTVR--TY-VENRPKYAGYSFE-KLFPDVLFPADSEHNKLKASQA 294 (364)
T ss_pred CCCCCCCHHHHHHH---HHHhcCCCCH-HHHHhhhHHHH--HH-HhhCCCcCCCChH-hhCccccccccccccccccHHH
Confidence 35544443333322 2332233223 22221111100 00 0111221110000 000000 011235688
Q ss_pred HHHHHHHHhhcCcccccccchhhcccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
++.+.+||..||..|++..+.+.|+||..
T Consensus 295 ~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 295 RDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred HHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 99999999999999999999999999965
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=234.26 Aligned_cols=213 Identities=22% Similarity=0.291 Sum_probs=154.0
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecC----ChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRP----GIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p----~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+...-.+-+|.|+||.||+++++.+|+.||||..++ ...+....+++++|.+ +|+||+++.+.=..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL----------nh~NIVk~f~iee~ 82 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL----------NHPNIVKLFDIEET 82 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc----------CchhhhhhcccCCc
Confidence 334445789999999999999999999999999875 3344445555555544 38898888763111
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH--HhcCCCHHHHHH--HHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI--ESQGLKVLDLVN--TGIQC 279 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~--~~~~~~~~~~~~--~~i~~ 279 (487)
. .+ .--+...+++||||.||+|...... +..|++...++. ..+..
T Consensus 83 ~----------------------------~~---~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~ 131 (732)
T KOG4250|consen 83 K----------------------------FL---GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVS 131 (732)
T ss_pred c----------------------------cc---CcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHH
Confidence 1 00 0013556899999999999876542 345666555444 44667
Q ss_pred HHHHHHHCCccccCCCCCCeEEc--CCCc--EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLAT--PEGK--LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA-LDFLSPD 354 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~--~~g~--i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~ 354 (487)
|+.|||++||+||||||+||++- .+|+ -||+|||.|+.++++.. ..-+++..++++++++. -++.+..
T Consensus 132 al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~-------~~S~vGT~~YLhPel~E~q~~y~~t 204 (732)
T KOG4250|consen 132 ALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSL-------FTSLVGTEEYLHPELYERQKKYTAT 204 (732)
T ss_pred HHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCe-------eeeecCchhhcChHHHhhccCcCce
Confidence 99999999999999999999986 4454 69999999999987641 12345667888888888 4888999
Q ss_pred CCcchHHHHHHHHHHHhccC-CCC-cCcHHHHHHHH
Q 011399 355 VDVTPIVPALRNFFDDALNS-SVS-ELNFKTIVDGL 388 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~~~~~~-~~~-~~~~~~~~~~l 388 (487)
+|.||+|+++|+..++.++. |+. ..+...++|.+
T Consensus 205 VDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~ 240 (732)
T KOG4250|consen 205 VDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHI 240 (732)
T ss_pred eehhhhhhHHHHHhccCCCCCcCCCccccchhhhhh
Confidence 99999999999999976642 222 22344455544
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.5e-26 Score=230.62 Aligned_cols=204 Identities=16% Similarity=0.184 Sum_probs=131.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+.+.+|+.||||+++...... ......+..|.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~~~~~~~~E~---- 52 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE------------------------------KEQVGHIRAER---- 52 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH------------------------------hhHHHHHHHHH----
Confidence 67999999999999998899999999986321000 00001111222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
..+.++ +++ .+++.+. ......++||||++|++|.+..... .........+..++..||.|+|+.||+
T Consensus 53 --~il~~~-----~~~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~giv 123 (363)
T cd05628 53 --DILVEA-----DSL--WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFI 123 (363)
T ss_pred --HHHHhC-----CCC--CcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 111111 112 2333332 2235578999999999998875432 122334555667888899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH-----------------------------HHHHHHhcCHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-----------------------------HVVHMVNRDYEAM 341 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~-----------------------------~~~~~~~~~~~~~ 341 (487)
|||+||+|||++.+|.++|+|||+++.+....+..... .......+.+..+
T Consensus 124 HrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~ 203 (363)
T cd05628 124 HRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYI 203 (363)
T ss_pred ecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcccc
Confidence 99999999999999999999999998664321110000 0000112334455
Q ss_pred HHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHH
Q 011399 342 ARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFK 382 (487)
Q Consensus 342 ~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~ 382 (487)
+++....+..+.++|+||+|+.+++++.+. .|+...+..
T Consensus 204 aPE~~~~~~~~~~~DvwSlGvil~ell~G~--~Pf~~~~~~ 242 (363)
T cd05628 204 APEVFMQTGYNKLCDWWSLGVIMYEMLIGY--PPFCSETPQ 242 (363)
T ss_pred CHHHHcCCCCCCchhhhhhHHHHHHHHhCC--CCCCCCCHH
Confidence 555554455678899999999999999854 455444433
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-26 Score=235.00 Aligned_cols=203 Identities=16% Similarity=0.096 Sum_probs=128.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||+|++....... ..+.. . +..
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~-----------------------------~------~~~ 92 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSDSA-----------------------------F------FWE 92 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHH-----------------------------H------HHH
Confidence 67999999999999999899999999985321000 00000 0 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|...+.. .+++.+.-..-........++||||++|++|.++.............+..++..+|.|+|+.||+|||
T Consensus 93 e~~i~~~-----~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrD 167 (370)
T cd05621 93 ERDIMAF-----ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRD 167 (370)
T ss_pred HHHHHHh-----CCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 1111111 12222221111223345679999999999998875433333444555678888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
|||+|||++.+|.++|+|||++..+.............+..+..||.+...- ..+..+.++|+||+|+.+++++++.
T Consensus 168 LKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~~DiwSlG~ilyell~G~-- 244 (370)
T cd05621 168 VKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQG-GDGYYGRECDWWSVGVFLFEMLVGD-- 244 (370)
T ss_pred CCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccC-CCCCCCcccCEEeehHHHHHHHhCC--
Confidence 9999999999999999999999876432111000111122233344332100 0134578899999999999999843
Q ss_pred CCCCcCc
Q 011399 374 SSVSELN 380 (487)
Q Consensus 374 ~~~~~~~ 380 (487)
.|+...+
T Consensus 245 ~Pf~~~~ 251 (370)
T cd05621 245 TPFYADS 251 (370)
T ss_pred CCCCCCC
Confidence 3444444
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-26 Score=227.01 Aligned_cols=197 Identities=18% Similarity=0.161 Sum_probs=125.7
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||.||+|++..+|+.||||++++..... ..+.. . +..|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~-----------------------------~------~~~e 45 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVE-----------------------------C------TMVE 45 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH-----------------------------H------HHHH
Confidence 5899999999999999889999999987532110 00000 0 0111
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
...+. ...+++.+.-..-+.......++||||++|++|.+..... .........+..++..++.|+|+.|++|||
T Consensus 46 ~~~l~----~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrd 121 (316)
T cd05619 46 KRVLS----LAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRD 121 (316)
T ss_pred HHHHH----hccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 11111 0112222211111122335578999999999998764322 223344455667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+||+|||++.+|.++|+|||++...... ...... +.+..++++.......+.++|+||+|+.+++++++.
T Consensus 122 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~ 193 (316)
T cd05619 122 LKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC--------GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQ 193 (316)
T ss_pred CCHHHEEECCCCCEEEccCCcceECCCCCCceeeec--------CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCC
Confidence 9999999999999999999998753211 111111 222333444444445678899999999999999743
Q ss_pred ccCCCCcCcH
Q 011399 372 LNSSVSELNF 381 (487)
Q Consensus 372 ~~~~~~~~~~ 381 (487)
.|+...+.
T Consensus 194 --~pf~~~~~ 201 (316)
T cd05619 194 --SPFHGHDE 201 (316)
T ss_pred --CCCCCCCH
Confidence 35544443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-26 Score=236.27 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=154.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||+|++....... ..+. .. +..
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~------~~~ 92 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RSDS-----------------------------AF------FWE 92 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhhH-----------------------------HH------HHH
Confidence 67999999999999999899999999986321000 0000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|...+..+ +++.+.-..-+.......++||||++|++|.++.............+..++..||.|||+.|++|||
T Consensus 93 e~~il~~~-----~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 167 (370)
T cd05596 93 ERDIMAHA-----NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRD 167 (370)
T ss_pred HHHHHHhC-----CCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 22111111 1222211111223345678999999999998875433333344555667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH----cCCCCCCCCcchHHHHHHHHHH
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA----LDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|||+|||++.+|.++|+|||++..+......... ...+.+..+++++.. .+..+.++|+||+|+.++++++
T Consensus 168 Lkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyellt 242 (370)
T cd05596 168 VKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCD-----TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 242 (370)
T ss_pred CCHHHEEEcCCCCEEEEeccceeeccCCCcccCC-----CCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHh
Confidence 9999999999999999999999876432110000 011223334444332 2345778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .|+...+.......+... ...... |.. ...++.+++.
T Consensus 243 G~--~Pf~~~~~~~~~~~i~~~--~~~~~~----------------------~~~---------------~~~s~~~~~l 281 (370)
T cd05596 243 GD--TPFYADSLVGTYSKIMDH--KNSLTF----------------------PDD---------------IEISKQAKDL 281 (370)
T ss_pred CC--CCcCCCCHHHHHHHHHcC--CCcCCC----------------------CCc---------------CCCCHHHHHH
Confidence 53 344443332222111100 000000 110 0235667777
Q ss_pred HHHHHhhcCcc--cccccchhhccccc
Q 011399 450 LVELLFKDGRF--RHVLYSPFTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~--r~~~~~~~~~~~~~ 474 (487)
+..||..+|.. |++..+.+.|+||.
T Consensus 282 i~~~L~~~p~r~~R~s~~ell~h~~~~ 308 (370)
T cd05596 282 ICAFLTDREVRLGRNGVDEIKSHPFFK 308 (370)
T ss_pred HHHHccChhhccCCCCHHHHhcCcccC
Confidence 77777766665 77777777777774
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-27 Score=220.06 Aligned_cols=199 Identities=19% Similarity=0.278 Sum_probs=143.0
Q ss_pred HHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHH-HHHHHHHHHhhhhhccc
Q 011399 113 FSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFY-LIRGVGFLINKYVDIIT 191 (487)
Q Consensus 113 ~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~-~l~~~~~~~~~~~~~~~ 191 (487)
.+.=+..|.++.+++|..+ +.+|+||+|.||+|.++.+|+.||||...- +.|+. +++.+..+. +-..
T Consensus 20 ~KLd~~sL~K~PEEVFDi~--~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV------~sDLQEIIKEISIMQ----QC~S 87 (502)
T KOG0574|consen 20 FKLDSSALNKPPEEVFDIV--GKLGEGSYGSVHKAIHRESGHVLAIKKVPV------DTDLQEIIKEISIMQ----QCKS 87 (502)
T ss_pred cccChhhhcCChHHHHHHH--HHhcCCcchHHHHHHHhccCcEEEEEecCc------cchHHHHHHHHHHHH----HcCC
Confidence 3444667888999999988 679999999999999999999999998763 23332 222222111 1112
Q ss_pred CCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH
Q 011399 192 TDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD 271 (487)
Q Consensus 192 ~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~ 271 (487)
+.++.++..+- -.+..|+|||||-.|+++|+.+.+...+....
T Consensus 88 ~yVVKYYGSYF-------------------------------------K~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~E 130 (502)
T KOG0574|consen 88 KYVVKYYGSYF-------------------------------------KHSDLWIVMEYCGAGSISDIMRARRKPLSEQE 130 (502)
T ss_pred chhhhhhhhhc-------------------------------------cCCceEeehhhcCCCcHHHHHHHhcCCccHHH
Confidence 22222222110 03677999999999999999888777766554
Q ss_pred HHH--HHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHH-HH
Q 011399 272 LVN--TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARD-YY 346 (487)
Q Consensus 272 ~~~--~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~ 346 (487)
+.. +..+.+|+|||...-+|||+|.||||++.+|..||+|||.++++++.. |.+..|+ |-+|+++ +.
T Consensus 131 Is~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGT--------PFWMAPEVI~ 202 (502)
T KOG0574|consen 131 ISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGT--------PFWMAPEVIE 202 (502)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccC--------cccccHHHHH
Confidence 433 445569999999999999999999999999999999999999998763 4444444 3333332 23
Q ss_pred HcCCCCCCCCcchHHHHHHHHHH
Q 011399 347 ALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 347 ~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
..|| ....|+||+|.+--||.+
T Consensus 203 EIGY-~~~ADIWSLGITaIEMAE 224 (502)
T KOG0574|consen 203 EIGY-DTKADIWSLGITAIEMAE 224 (502)
T ss_pred Hhcc-chhhhHhhhcchhhhhhc
Confidence 5666 678899999988888776
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-26 Score=227.66 Aligned_cols=246 Identities=14% Similarity=0.018 Sum_probs=152.4
Q ss_pred cccccccccEEEEEEEccCC-cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSG-QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g-~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||+|+||.||+|.++.++ ..||+|+........ .... +. +.
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~-~~~~-----------------------------~~------~~ 79 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIK-QKQV-----------------------------DH------VF 79 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhh-hhhH-----------------------------HH------HH
Confidence 78999999999999876444 789999885321000 0000 00 11
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
.|...+..+ +++++.-..-+....+..++||||++|++|.+...... ........+..++..++.|+|+.|++|
T Consensus 80 ~E~~~l~~l-----~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 154 (340)
T PTZ00426 80 SERKILNYI-----NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVY 154 (340)
T ss_pred HHHHHHHhC-----CCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 222222222 11221111111222355789999999999987754321 222334456678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+|||++.+|.++|+|||++..+..... ... +.+..++++.......+.++|+||+|+.+++++++.
T Consensus 155 rDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~-~~~--------gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~ 225 (340)
T PTZ00426 155 RDLKPENLLLDKDGFIKMTDFGFAKVVDTRTY-TLC--------GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGC 225 (340)
T ss_pred cCCCHHHEEECCCCCEEEecCCCCeecCCCcc-eec--------CChhhcCHHHHhCCCCCccccccchhhHHHHHhcCC
Confidence 99999999999999999999999987654321 112 233444555544445578899999999999999753
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.|+...+.......+.. ..... | ...++..++.++
T Consensus 226 --~Pf~~~~~~~~~~~i~~----~~~~~----------------------p-----------------~~~~~~~~~li~ 260 (340)
T PTZ00426 226 --PPFYANEPLLIYQKILE----GIIYF----------------------P-----------------KFLDNNCKHLMK 260 (340)
T ss_pred --CCCCCCCHHHHHHHHhc----CCCCC----------------------C-----------------CCCCHHHHHHHH
Confidence 34433322111111100 00000 0 123566778888
Q ss_pred HHHhhcCcccc-----cccchhhccccc
Q 011399 452 ELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
+||.+||.+|+ +..+...|+||.
T Consensus 261 ~~l~~dp~~R~~~~~~~~~~~~~hp~f~ 288 (340)
T PTZ00426 261 KLLSHDLTKRYGNLKKGAQNVKEHPWFG 288 (340)
T ss_pred HHcccCHHHcCCCCCCCHHHHHcCCCcC
Confidence 88888888887 445666788884
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-25 Score=220.25 Aligned_cols=200 Identities=17% Similarity=0.124 Sum_probs=130.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+.+.+|+.||||++++..... ..+. . .+..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~------~~~~ 49 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV-----------------------------E------CTMV 49 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------H------HHHH
Confidence 67999999999999999889999999987432110 0000 0 0111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+. ....++.+....-........++||||++|++|.+..... .........+..++..++.|+|+.|++||
T Consensus 50 e~~~l~----~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 125 (323)
T cd05616 50 EKRVLA----LSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYR 125 (323)
T ss_pred HHHHHH----hccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 111111 1122333322222223345678999999999997764322 12233444556788889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|+||+|||++.+|.++|+|||++......... .....+.+..++++....+-.+.++|+||+|+.+++++++.
T Consensus 126 Dlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~- 198 (323)
T cd05616 126 DLKLDNVMLDSEGHIKIADFGMCKENMWDGVT------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ- 198 (323)
T ss_pred CCCHHHeEECCCCcEEEccCCCceecCCCCCc------cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCC-
Confidence 99999999999999999999998754321100 00112334445555555566688999999999999999843
Q ss_pred cCCCCcCcH
Q 011399 373 NSSVSELNF 381 (487)
Q Consensus 373 ~~~~~~~~~ 381 (487)
.|+...+.
T Consensus 199 -~Pf~~~~~ 206 (323)
T cd05616 199 -APFEGEDE 206 (323)
T ss_pred -CCCCCCCH
Confidence 45544443
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.7e-26 Score=229.30 Aligned_cols=292 Identities=15% Similarity=0.186 Sum_probs=165.2
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|... +.||+|+||.||+|.+..+|+.||||++........ .....++.+ ..+....|+|++.+++.+...
T Consensus 23 y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~----~~l~~l~h~niv~~~~~~~~~--- 92 (359)
T cd07876 23 YQQL--KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT-HAKRAYREL----VLLKCVNHKNIISLLNVFTPQ--- 92 (359)
T ss_pred eEEE--EEeecCCCEEEEEEEEcCCCceeEEEEecccccchh-HHHHHHHHH----HHHHhCCCCCEeeeeeeeccC---
Confidence 4444 789999999999999988999999999864321110 000111111 111122355555544422100
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
-........++||||++|+ +.+... ..........+..++..+|.|||++
T Consensus 93 ----------------------------~~~~~~~~~~lv~e~~~~~-l~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~ 142 (359)
T cd07876 93 ----------------------------KSLEEFQDVYLVMELMDAN-LCQVIH-MELDHERMSYLLYQMLCGIKHLHSA 142 (359)
T ss_pred ----------------------------CCccccceeEEEEeCCCcC-HHHHHh-ccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0000113458999999874 333211 1122233445667888999999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++||||||+||+++.+|.++|+|||+++........ .....+..+..||.+ .....++++|+||+|+.++++
T Consensus 143 ~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~t~~y~aPE~~-----~~~~~~~~~DiwSlG~il~el 215 (359)
T cd07876 143 GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM--TPYVVTRYYRAPEVI-----LGMGYKENVDIWSVGCIMGEL 215 (359)
T ss_pred CcccCCCCHHHEEECCCCCEEEecCCCccccccCccC--CCCcccCCCCCchhc-----cCCCCCcchhhHHHHHHHHHH
Confidence 9999999999999999999999999999765332110 011112223344433 233457789999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHH--hHhH-HHH---HHhccC
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA--ASYP-YFA---KRLLTD 441 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~--~~~p-~~~---~~l~~~ 441 (487)
+++. .++...+....... .+.............+.... ... ..-.|.+.... ...| +.. ......
T Consensus 216 ~tg~--~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (359)
T cd07876 216 VKGS--VIFQGTDHIDQWNK---VIEQLGTPSAEFMNRLQPTV---RNY-VENRPQYPGISFEELFPDWIFPSESERDKL 286 (359)
T ss_pred HhCC--CCCCCCCHHHHHHH---HHHhcCCCcHHHHHHHHHHH---HHH-HhhCCCCCCcchhhhccccccccccccccc
Confidence 9854 34444433222222 22221111111111111111 000 01112111100 0000 000 000112
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.++.+++.+.+||..||++|++..+.+.|+||..
T Consensus 287 ~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 287 KTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred cchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 4678999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-26 Score=226.78 Aligned_cols=189 Identities=20% Similarity=0.186 Sum_probs=122.2
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||+||+|+.+.+|+.||||+.+.............++....++ ....|++++.+.
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l---~~~~hp~iv~~~---------------- 62 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLL---KNVKHPFLVGLH---------------- 62 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHH---HhCCCCCCccEE----------------
Confidence 5899999999999998899999999986432111000000011000000 001122222211
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
-+.......++||||++|++|....... .........+..++..++.|||+.|++|||
T Consensus 63 ---------------------~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~D 121 (325)
T cd05604 63 ---------------------YSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRD 121 (325)
T ss_pred ---------------------EEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 1122345678999999999997653321 122233445667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+||+|||++.+|.++|+|||++...... ...... +.+..++++....+..+.++|+||+|+.+++++.+.
T Consensus 122 lkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~ 193 (325)
T cd05604 122 LKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC--------GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred CCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc--------CChhhCCHHHHcCCCCCCcCccccccceehhhhcCC
Confidence 9999999999999999999998753221 111111 233344444444455678899999999999999743
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-26 Score=191.48 Aligned_cols=119 Identities=41% Similarity=0.715 Sum_probs=114.6
Q ss_pred HHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHH
Q 011399 118 RELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVAL 197 (487)
Q Consensus 118 ~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~ 197 (487)
++||.+++++|++||++|||+||+||||+|+++ +|++||||+++|++.+.+..|+.+|+.++.+++++......++..+
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~-~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~ 79 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLK-DGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEI 79 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeec-ccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHH
Confidence 369999999999999999999999999999998 8999999999999999999999999999999999877667899999
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee
Q 011399 198 IDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF 237 (487)
Q Consensus 198 ~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~ 237 (487)
++++.+.+.+|+||..|++|+.+++++|.+.+.++||++|
T Consensus 80 ~~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 80 VDEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 9999999999999999999999999999999999999986
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-26 Score=222.05 Aligned_cols=251 Identities=16% Similarity=0.124 Sum_probs=154.7
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||+|+||+||+|.++.+|+.||||++........ .. + + .+..|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-~~----------------------------~-~------~~~~E~ 44 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR-KG----------------------------Y-E------GAMVEK 44 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh-HH----------------------------H-H------HHHHHH
Confidence 6999999999999998999999999863311100 00 0 0 012222
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH---hcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
+.+.++ +++.+....-+....+..++||||++|++|.+..... ....+. ...+..++..++.|+|+.|++
T Consensus 45 ~il~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 119 (280)
T cd05608 45 RILAKV-----HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRII 119 (280)
T ss_pred HHHHhC-----CCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 222222 1222222111223345678999999999997654221 112333 334557888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|||+||+||+++.+|.++|+|||++..+....... .+ ..+.+..++++....+-.+.+.|+||+|+.+++++++
T Consensus 120 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~-~~-----~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g 193 (280)
T cd05608 120 YRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT-KG-----YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAA 193 (280)
T ss_pred cCCCCHHHEEECCCCCEEEeeCccceecCCCCccc-cc-----cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhC
Confidence 99999999999999999999999997664332110 00 1122333444444455567789999999999999985
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
.. |+...+.......+. +.. +.+... .....++.+++.+
T Consensus 194 ~~--pf~~~~~~~~~~~~~------------------~~~---------~~~~~~------------~~~~~~~~~~~li 232 (280)
T cd05608 194 RG--PFRARGEKVENKELK------------------QRI---------LNDSVT------------YPDKFSPASKSFC 232 (280)
T ss_pred CC--CCCCCCcchhHHHHH------------------Hhh---------cccCCC------------CcccCCHHHHHHH
Confidence 43 332211100000000 000 000000 0113467888899
Q ss_pred HHHHhhcCcccc-----cccchhhccccc
Q 011399 451 VELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
.+||..||..|+ +..+.+.|+||.
T Consensus 233 ~~~l~~~P~~R~~~~~~~~~~~l~h~~~~ 261 (280)
T cd05608 233 EALLAKDPEKRLGFRDGNCDGLRTHPLFR 261 (280)
T ss_pred HHHhcCCHHHhcCCCCCCHHHHhcChhhh
Confidence 999999999999 556778899984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-26 Score=206.40 Aligned_cols=271 Identities=15% Similarity=0.182 Sum_probs=191.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.+|.|.++.|+.|..-.+.+.++||+++|-..+.+.+++++++.+. .++|++.+++...+.
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~---------gg~NIi~L~DiV~Dp--------- 105 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLR---------GGPNIIKLLDIVKDP--------- 105 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhcc---------CCCCeeehhhhhcCc---------
Confidence 67999999999999987789999999999999999999999888776 379999998865533
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.|...-|+.||+++.+...+ ......-..+.+..++..||.|||+.||+|||
T Consensus 106 --------------------------~SktpaLiFE~v~n~Dfk~l--y~tl~d~dIryY~~elLkALdyCHS~GImHRD 157 (338)
T KOG0668|consen 106 --------------------------ESKTPSLIFEYVNNTDFKQL--YPTLTDYDIRYYIYELLKALDYCHSMGIMHRD 157 (338)
T ss_pred --------------------------cccCchhHhhhhccccHHHH--hhhhchhhHHHHHHHHHHHHhHHHhcCccccc
Confidence 12333488999988766554 23333445677888999999999999999999
Q ss_pred CCCCCeEEcCC-CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 294 PHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 294 lkp~Nili~~~-g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
+||.|++|++. .+++|+|||+|....+..-.+. -+.+.....||.+. .....+.+.|+||+||.+..|+-.--
T Consensus 158 VKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV--RVASRyfKGPELLV----dy~~YDYSLD~WS~GcmlA~miFrke 231 (338)
T KOG0668|consen 158 VKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKE 231 (338)
T ss_pred CCcceeeechhhceeeeeecchHhhcCCCceeee--eeehhhcCCchhee----echhccccHHHHHHHHHHHHHHhccC
Confidence 99999999965 5799999999988766532211 12233444555543 34445778999999999999885322
Q ss_pred cCCCCcCcHHHHH--------HHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc----c
Q 011399 373 NSSVSELNFKTIV--------DGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL----T 440 (487)
Q Consensus 373 ~~~~~~~~~~~~~--------~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~----~ 440 (487)
+.--...+..+++ .++..-+.++...++|.+..++... +.+|+ .+..- .
T Consensus 232 pFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~------------------~rk~w-~~Fi~~~n~h 292 (338)
T KOG0668|consen 232 PFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRH------------------SRKPW-SRFINSENQH 292 (338)
T ss_pred cccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcc------------------ccccH-HHhCCccccc
Confidence 2111222333332 1223334455566666654433221 01111 11111 1
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
-.+|++-+.+.++|+.|-..|.++-+++.|+||..
T Consensus 293 l~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 293 LVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred cCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 14799999999999999999999999999999964
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-26 Score=225.70 Aligned_cols=250 Identities=19% Similarity=0.184 Sum_probs=152.0
Q ss_pred cccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|+.. .+|+.||||+++...... +......+......+....|+|++.+++.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~~E~~il~~l~hp~iv~~~~~---------- 68 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVR---NQKDTAHTKAERNILEAVKHPFIVDLIYA---------- 68 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHh---hhhhHHHHHHHHHHHHhCCCCchhceeeE----------
Confidence 56999999999999863 368999999986421110 00000001111111111224443333321
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
....+..++||||++|++|.+...... ...+....+..++..++.|+|+.|+
T Consensus 69 ---------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 69 ---------------------------FQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred ---------------------------EecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 122355789999999999977643221 1122334456788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+||+|||++.+|.++|+|||+++......... ....+.+..++++.......+.++|+||+|+.++++++
T Consensus 122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 195 (323)
T cd05584 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVT------HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLT 195 (323)
T ss_pred ecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcc------cccCCCccccChhhccCCCCCCcceecccHHHHHHHhc
Confidence 999999999999999999999999987532211100 00112233344444434445778999999999999997
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .|+...+.......+.. .... +....++.+++.
T Consensus 196 G~--~pf~~~~~~~~~~~~~~-------------------------------~~~~------------~~~~~~~~~~~l 230 (323)
T cd05584 196 GA--PPFTAENRKKTIDKILK-------------------------------GKLN------------LPPYLTPEARDL 230 (323)
T ss_pred CC--CCCCCCCHHHHHHHHHc-------------------------------CCCC------------CCCCCCHHHHHH
Confidence 43 34433332221111110 0000 011235677888
Q ss_pred HHHHHhhcCcccc-----cccchhhccccc
Q 011399 450 LVELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
+.+||.+||..|+ +..+...|+||.
T Consensus 231 i~~~l~~~p~~R~~~~~~~~~~l~~h~~~~ 260 (323)
T cd05584 231 LKKLLKRNPSSRLGAGPGDAAEVQSHPFFR 260 (323)
T ss_pred HHHHcccCHhHcCCCCCCCHHHHhcCCCcC
Confidence 8888888888888 566777888874
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-26 Score=232.06 Aligned_cols=195 Identities=15% Similarity=0.173 Sum_probs=123.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+.+.+|+.||||+++...... .. ....+.+
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~----~~--------------------------~~~~~~~------ 50 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLL----RN--------------------------QVAHVKA------ 50 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhh----HH--------------------------HHHHHHH------
Confidence 77999999999999999899999999986321000 00 0011111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ +++. +.+++. ......++||||++|++|.++.... .........+..++..++.|+|+.||+
T Consensus 51 E~~il~~~-----~h~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~iv 123 (382)
T cd05625 51 ERDILAEA-----DNEW--VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFI 123 (382)
T ss_pred HHHHHHhC-----CCCc--CCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 22222211 1121 222222 2235578999999999998774322 122334455667888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH--------------------------------------HHHH---HHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEA--------------------------------------RFAI---IGH 329 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~--------------------------------------~~~~---~~~ 329 (487)
||||||+|||++.+|.++|+|||++..+.... +... ...
T Consensus 124 HrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (382)
T cd05625 124 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRC 203 (382)
T ss_pred cCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence 99999999999999999999999975431100 0000 000
Q ss_pred HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 330 VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
......+.+..++++.....-.+.++|+||+||.+++++++.
T Consensus 204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~ 245 (382)
T cd05625 204 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 245 (382)
T ss_pred cccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCC
Confidence 000011233444444444444578899999999999999853
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-26 Score=227.97 Aligned_cols=278 Identities=18% Similarity=0.187 Sum_probs=158.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+.+.+|+.||||+++....... .. .+.+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~------------------------------------~~~~ 52 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGT--PF------------------------------------TAIR 52 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEecccccccc--ch------------------------------------hHHH
Confidence 789999999999999988999999999863311100 00 0111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
|+..+.++ +++++....-+.......++||||++| ++.+.......+.+ ....+..++..|+.|+|+.|++|
T Consensus 53 E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 126 (303)
T cd07869 53 EASLLKGL-----KHANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILH 126 (303)
T ss_pred HHHHHhhC-----CCCCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 22222111 112221111122234567899999976 55444322222233 34455678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+|||++.+|.++|+|||++........ .......+..+..||.+. .....+..+|+||+|+.+++++++.
T Consensus 127 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~il~~l~~g~ 201 (303)
T cd07869 127 RDLKPQNLLISDTGELKLADFGLARAKSVPSH-TYSNEVVTLWYRPPDVLL----GSTEYSTCLDMWGVGCIFVEMIQGV 201 (303)
T ss_pred CCCCHHHEEECCCCCEEECCCCcceeccCCCc-cCCCCcccCCCCChHHHc----CCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999875432111 001111122333444321 1223466789999999999999854
Q ss_pred ccCCCCcC-cHHHHHHHHHHHHhhCC-CCCChHHHHHHHHHHHHHHhhhhhCCC-CChHHhHhHHHHHHhccCCCHHHHH
Q 011399 372 LNSSVSEL-NFKTIVDGLGAVLYQYP-FNVPAYYALILRSLTVLEGLALYADPN-FKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 372 ~~~~~~~~-~~~~~~~~l~~~~~~~~-~~~p~~~~~l~r~l~~leg~~~~ldP~-~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
. ++... +....+..+........ ...|.. .+. ...+|+ +..... ...-...-....++.+++
T Consensus 202 ~--pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d 266 (303)
T cd07869 202 A--AFPGMKDIQDQLERIFLVLGTPNEDTWPGV-----HSL-------PHFKPERFTLYSP-KNLRQAWNKLSYVNHAED 266 (303)
T ss_pred C--CCCCCccHHHHHHHHHHHhCCCChhhccch-----hhc-------cccccccccccCC-ccHHHHhhccCCChHHHH
Confidence 3 44332 22222222222111000 000000 000 001111 000000 000000111134678999
Q ss_pred HHHHHHhhcCcccccccchhhcccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.+.+||..||++|++..+.+.|+||.-
T Consensus 267 li~~mL~~dp~~R~s~~~~l~h~~f~~ 293 (303)
T cd07869 267 LASKLLQCFPKNRLSAQAALSHEYFSD 293 (303)
T ss_pred HHHHHhccCchhccCHHHHhcCccccc
Confidence 999999999999999999999999953
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=224.14 Aligned_cols=286 Identities=17% Similarity=0.137 Sum_probs=164.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++....... .-...+++ ...+....|+|++.+.+.+...
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~E----~~~l~~l~hpniv~~~~~~~~~--------- 71 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVS-DATRILRE----IKLLRLLRHPDIVEIKHIMLPP--------- 71 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccch-hHHHHHHH----HHHHHhCCCCCEeeecceEecc---------
Confidence 679999999999999988999999998863211100 00011111 1111122355544443321100
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
- .......++||||+.+ +|.+..... .........+..++..||.|||+.|++||
T Consensus 72 ----------------------~-~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 127 (338)
T cd07859 72 ----------------------S-RREFKDIYVVFELMES-DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHR 127 (338)
T ss_pred ----------------------C-CCCCceEEEEEecCCC-CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 0 0001236899999965 666553221 12233445566788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+||+|||++.+|.++|+|||++.......... ......+..+..||.+.. ..+..++++|+||+|+.+++++++
T Consensus 128 dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~~~DvwSlGvvl~el~tg 204 (338)
T cd07859 128 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS---FFSKYTPAIDIWSIGCIFAEVLTG 204 (338)
T ss_pred CCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhc---cccccCchhHHHHHHHHHHHHHcC
Confidence 999999999999999999999998653221110 001111223344443321 013457789999999999999985
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+.......+.... ...|+.....++.....+ ....+.+.. ..++ . ......++.+++.+
T Consensus 205 ~--~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~-~~~~~~~~~-----~~~~-~-~~~~~~~~~~~~li 270 (338)
T cd07859 205 K--PLFPGKNVVHQLDLITDLL----GTPSPETISRVRNEKARR-YLSSMRKKQ-----PVPF-S-QKFPNADPLALRLL 270 (338)
T ss_pred C--CCCCCCChHHHHHHHHHHh----CCCCHHHHHHhhhhhHHH-HHHhhcccC-----CCch-H-HhcCCCChHHHHHH
Confidence 3 3444444322222222211 112222221111110000 000010100 0011 1 11224578899999
Q ss_pred HHHHhhcCcccccccchhhccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+||..||..|++..+.+.|+||.
T Consensus 271 ~~~l~~~P~~Rpt~~e~l~hp~f~ 294 (338)
T cd07859 271 ERLLAFDPKDRPTAEEALADPYFK 294 (338)
T ss_pred HHHcCcCcccCCCHHHHhcCchhh
Confidence 999999999999999999999994
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-26 Score=234.51 Aligned_cols=197 Identities=15% Similarity=0.171 Sum_probs=124.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+...+|+.||||+++...... ......+.+|++.+
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~------------------------------~~~~~~~~~E~~il- 55 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM------------------------------RNQAAHVKAERDIL- 55 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh------------------------------hhhHHHHHHHHHHH-
Confidence 78999999999999999899999999986321000 00001112222222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
.++ +++.+.-........+..++||||++|++|.++..... ........+..++..|+.|||+.||+||
T Consensus 56 -----~~l-----~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHr 125 (376)
T cd05598 56 -----AEA-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHR 125 (376)
T ss_pred -----HhC-----CCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 111 12222111112233466789999999999988743321 1233344556788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHH----------------------------------HHHHHHH---HHHHHHh
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE----------------------------------ARFAIIG---HVVHMVN 335 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~----------------------------------~~~~~~~---~~~~~~~ 335 (487)
||||+|||++.+|.++|+|||++..+... .+..... .......
T Consensus 126 Dlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (376)
T cd05598 126 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLV 205 (376)
T ss_pred CCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccC
Confidence 99999999999999999999997533100 0000000 0000012
Q ss_pred cCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 336 RDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 336 ~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+.+..++++.......+.++|+||+|+.+++++++.
T Consensus 206 gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~ 241 (376)
T cd05598 206 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241 (376)
T ss_pred CCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence 333444455444445578899999999999998743
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.4e-26 Score=222.88 Aligned_cols=275 Identities=19% Similarity=0.183 Sum_probs=160.3
Q ss_pred cccccccccEEEEEEEcc-CCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-SGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-~g~~VAVKv~~p~~~~-----~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
+.||+|+||.||+|++.. +|+.||||+.+..... ....++.+++ .+....|+|++.+.+.+..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~-------~l~~~~hpniv~~~~~~~~---- 75 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR-------HLETFEHPNVVRLFDVCTV---- 75 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHH-------hhcccCCCCcceEEEEEec----
Confidence 679999999999999853 5789999988643211 0111111111 1111123333322211000
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCC--HHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLK--VLDLVNTGIQCSLRQL 284 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~--~~~~~~~~i~~~l~~l 284 (487)
...+..+..++||||++| +|.++.... ..+.+ ....+..++..++.|+
T Consensus 76 ----------------------------~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l 126 (290)
T cd07862 76 ----------------------------SRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 126 (290)
T ss_pred ----------------------------ccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 001123457899999976 666653321 12233 3344567888899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
|+.|++|||+||+|||++.+|.++|+|||++........ ......+..+..||. ...+..+.++|+||+|+.+
T Consensus 127 H~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~-----~~~~~~~~~~DiwslG~il 199 (290)
T cd07862 127 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV-----LLQSSYATPVDLWSVGCIF 199 (290)
T ss_pred HHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcc--cccccccccccChHH-----HhCCCCCCccchHHHHHHH
Confidence 999999999999999999999999999999976643311 111112233334443 3344557789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++++++. .++...+....+..+... .....|..+..... + .+ ..+.+.- ..| ...+....++
T Consensus 200 ~el~~g~--~~f~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~-~--~~---~~~~~~~-----~~~--~~~~~~~~~~ 261 (290)
T cd07862 200 AEMFRRK--PLFRGSSDVDQLGKILDV---IGLPGEEDWPRDVA-L--PR---QAFHSKS-----AQP--IEKFVTDIDE 261 (290)
T ss_pred HHHHcCC--CCcCCCCHHHHHHHHHHH---hCCCChhhchhhhc-c--cc---hhccCCC-----CCC--HHHHccCCCH
Confidence 9999642 344443332323222221 11111222110000 0 00 0011100 001 1122335678
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+++.+.+||..||++|++..+.+.|+||
T Consensus 262 ~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 262 LGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 89999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=232.76 Aligned_cols=281 Identities=16% Similarity=0.146 Sum_probs=166.7
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
...|... +.||+|+||.||+|....+|+.||||++..... ....++.+++ ...|+|++.+.+.+...
T Consensus 65 ~~~y~~~--~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-~~~~Ei~il~----------~l~h~niv~l~~~~~~~ 131 (440)
T PTZ00036 65 NKSYKLG--NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ-YKNRELLIMK----------NLNHINIIFLKDYYYTE 131 (440)
T ss_pred CCeEEEe--EEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc-hHHHHHHHHH----------hcCCCCCcceeeeEeec
Confidence 3345444 679999999999999988999999998854321 1122232222 22366666654422100
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecC--CCCceEEEeecCCCCcCcHHHH-H--hcC--CCHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAI-E--SQG--LKVLDLVNTGI 277 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~-~--~~~--~~~~~~~~~~i 277 (487)
.+... ....++||||++| ++.+.... . ... ......+..++
T Consensus 132 -------------------------------~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi 179 (440)
T PTZ00036 132 -------------------------------CFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQL 179 (440)
T ss_pred -------------------------------ccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 00000 1124689999987 44443221 1 112 23344566788
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
..||.|||+.||+||||||+|||++.++ .+||+|||+++.+...... .....+..+..||.+. .....+.++|
T Consensus 180 ~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~--~~~~~t~~y~aPE~~~----~~~~~~~~~D 253 (440)
T PTZ00036 180 CRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRS--VSYICSRFYRAPELML----GATNYTTHID 253 (440)
T ss_pred HHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCc--ccCCCCcCccCHHHhc----CCCCCCcHHH
Confidence 8999999999999999999999999665 6999999999876433211 1111122233344321 1223577899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChH---HhHhHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL---AASYPY 433 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~---~~~~p~ 433 (487)
+||+|+.+++++++. .++.+.+....+..+...+ +.|+.- ..+ ..+|.+... .....-
T Consensus 254 iwSlGvil~elltG~--~pf~~~~~~~~~~~i~~~~-----~~p~~~--~~~----------~~~~~~~~~~~~~~~~~~ 314 (440)
T PTZ00036 254 LWSLGCIIAEMILGY--PIFSGQSSVDQLVRIIQVL-----GTPTED--QLK----------EMNPNYADIKFPDVKPKD 314 (440)
T ss_pred HHHHHHHHHHHHhCC--CCCCCCChHHHHHHHHHHh-----CCCCHH--HHH----------HhchhhhcccCCccCchh
Confidence 999999999999864 3444443322222222211 112110 000 011111100 000011
Q ss_pred HHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 434 FAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 434 ~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+...+....++++++.+.+||.+||.+|++..+.+.|+||+.
T Consensus 315 l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 315 LKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred HHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 122223345789999999999999999999999999999953
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-25 Score=221.01 Aligned_cols=254 Identities=16% Similarity=0.134 Sum_probs=154.1
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||.||+|+++.+|+.||||++++..... ..+.. .+ ..|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~-~~~~~-----------------------------~~------~~e 45 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND-DEDID-----------------------------WV------QTE 45 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH-----------------------------HH------HHH
Confidence 5899999999999999899999999987432111 00000 01 111
Q ss_pred HHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 215 GQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
...+. ...+++.+ +.++ ....+..++||||++|++|.+..... .........+..++..++.|+|+.|++|
T Consensus 46 ~~il~----~~~~hp~I--v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH 119 (329)
T cd05588 46 KHVFE----TASNHPFL--VGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIY 119 (329)
T ss_pred HHHHH----hccCCCCC--CceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 11111 11122222 2222 22345679999999999997664322 2223344455678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCC-HH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETP-EE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
||+||+||+++.+|.++|+|||+++... .. .....+ +.+..++++....+..+.++|+||+|+.++++++
T Consensus 120 ~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~ 191 (329)
T cd05588 120 RDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC--------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 191 (329)
T ss_pred cCCCHHHeEECCCCCEEECcCccccccccCCCcccccc--------CCccccCHHHHcCCCCCCccceechHHHHHHHHH
Confidence 9999999999999999999999987531 11 111112 2333444444445556788999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+.. |++..... ..+...... .+.+.+ ...... +....++.+.+.
T Consensus 192 g~~--Pf~~~~~~-----------~~~~~~~~~--~~~~~~---------~~~~~~------------~p~~~~~~~~~l 235 (329)
T cd05588 192 GRS--PFDIVGMS-----------DNPDQNTED--YLFQVI---------LEKQIR------------IPRSLSVKASSV 235 (329)
T ss_pred CCC--Cccccccc-----------ccccccchH--HHHHHH---------HcCCCC------------CCCCCCHHHHHH
Confidence 543 33211100 000000000 000000 000000 112346778889
Q ss_pred HHHHHhhcCccccc------ccchhhccccc
Q 011399 450 LVELLFKDGRFRHV------LYSPFTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~r~~------~~~~~~~~~~~ 474 (487)
+.+||.+||..|++ ..+.+.|+||.
T Consensus 236 i~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~ 266 (329)
T cd05588 236 LKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266 (329)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence 99999999999987 34677889984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=219.23 Aligned_cols=274 Identities=19% Similarity=0.179 Sum_probs=163.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|+||+|+++.+|+.||+|+++..... ....++.+++.+. ...|+|++.+++.+...
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~-------~~~h~ni~~~~~~~~~~---- 74 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLE-------AFDHPNIVRLMDVCATS---- 74 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhh-------hcCCCCeeeeeeeeccc----
Confidence 6799999999999999989999999998643211 1112222222211 12244444444322100
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCC--HHHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLK--VLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~--~~~~~~~~i~~~l~~lh 285 (487)
..+.....+++|||+.+ ++.++.... ..+.+ ....+..++..++.|+|
T Consensus 75 ----------------------------~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 125 (288)
T cd07863 75 ----------------------------RTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125 (288)
T ss_pred ----------------------------cCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00112345899999986 565543221 12233 34455678889999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
+.|++|+|+||+||+++.+|.++|+|||++..+...... .....+..+..||. ...+..+.++|+||+|+.++
T Consensus 126 ~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~-----~~~~~~~~~~DiwslG~~l~ 198 (288)
T cd07863 126 ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMAL--TPVVVTLWYRAPEV-----LLQSTYATPVDMWSVGCIFA 198 (288)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccCccccccCcccC--CCccccccccCchH-----hhCCCCCCcchhhhHHHHHH
Confidence 999999999999999999999999999999876432110 01111223344443 33445688899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhh-CCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQ-YPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
+++.+. .++...+.......+...... .....|.... . ......+. .+.....+....+.
T Consensus 199 ~l~~g~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~-------~~~~~~~~~~~~~~ 259 (288)
T cd07863 199 EMFRRK--PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT-------L---PRGAFSPR-------GPRPVQSVVPEIEE 259 (288)
T ss_pred HHHhCC--cCcCCCCHHHHHHHHHHHhCCCChhhCccccc-------c---cccccCCC-------CCCchHHhCcCcCH
Confidence 998642 333333322222222221110 0001111100 0 00000010 00011233335678
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+++.+.+||..||.+|++..+.+.|+||
T Consensus 260 ~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 260 SGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred HHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 88999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-26 Score=228.84 Aligned_cols=253 Identities=14% Similarity=0.124 Sum_probs=155.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+.+.+|+.||||+++...... ...... +..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~-----------------------------------~~~ 50 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA-QETVSF-----------------------------------FEE 50 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHH-----------------------------------HHH
Confidence 67999999999999999899999999987431100 000000 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.. . +++.+.-..-+....+..++||||++|++|.++........+ ....+..++..+|.|+|+.|++|
T Consensus 51 e~~i~~~----~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H 125 (330)
T cd05601 51 ERDILSI----S-NSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVH 125 (330)
T ss_pred HHHHHHh----C-CCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 1111111 1 122211111112224567899999999999887554322333 34455678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH------cCCCCCCCCcchHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA------LDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~Di~sl~~~l~ 365 (487)
||+||+||+++.+|.++|+|||++..+......... ...+.+..+++++.. .+..+.++|+||+|+.++
T Consensus 126 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 200 (330)
T cd05601 126 RDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSK-----LPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAY 200 (330)
T ss_pred ccCchHheEECCCCCEEeccCCCCeECCCCCceeee-----cccCCccccCHHHhccccccccCCCCCcceeecccceee
Confidence 999999999999999999999999876543211000 011222333333332 344567899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++. .|+...+.......+.. . ......|. ....++.
T Consensus 201 el~~g~--~Pf~~~~~~~~~~~i~~---~---------------------~~~~~~~~---------------~~~~~~~ 239 (330)
T cd05601 201 EMIYGR--SPFHEGTSAKTYNNIMN---F---------------------QRFLKFPE---------------DPKVSSD 239 (330)
T ss_pred eeccCC--CCCCCCCHHHHHHHHHc---C---------------------CCccCCCC---------------CCCCCHH
Confidence 998743 34433332221111100 0 00000010 0124667
Q ss_pred HHHHHHHHHhhcCcccccccchhhccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+++.+..||. +|..|++..+.+.|+||+
T Consensus 240 ~~~li~~ll~-~p~~R~t~~~l~~h~~~~ 267 (330)
T cd05601 240 FLDLIQSLLC-GQKERLGYEGLCCHPFFS 267 (330)
T ss_pred HHHHHHHHcc-ChhhCCCHHHHhCCCCcC
Confidence 7888888887 889999998889999985
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=225.76 Aligned_cols=202 Identities=14% Similarity=0.143 Sum_probs=127.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+.+.+|+.||||++++..... ..+. ..+.+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~~~~------ 50 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK-RAET-----------------------------ACFRE------ 50 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhhH-----------------------------HHHHH------
Confidence 67999999999999999899999999986320000 0000 01111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcC--CCHHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQG--LKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~--~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+..+ +++. ++.++ .......++||||++|++|.++....... ......+..++..++.|+|+.|+
T Consensus 51 e~~~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (331)
T cd05597 51 ERDVLVNG-----DRRW--ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY 123 (331)
T ss_pred HHHHHHhC-----CCCC--CCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 11111111 1222 22222 22335678999999999998875432222 33445566788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+||+|||++.+|.++|+|||++..+.............+..+..||.+....-..+..+.++|+||+|+.+++++.
T Consensus 124 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 203 (331)
T cd05597 124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY 203 (331)
T ss_pred EECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhh
Confidence 99999999999999999999999998766432111000011122333444432111113445778999999999999997
Q ss_pred HhccCCCCcCc
Q 011399 370 DALNSSVSELN 380 (487)
Q Consensus 370 ~~~~~~~~~~~ 380 (487)
+. .|+...+
T Consensus 204 g~--~Pf~~~~ 212 (331)
T cd05597 204 GE--TPFYAES 212 (331)
T ss_pred CC--CCCCCCC
Confidence 43 3444433
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.3e-26 Score=221.29 Aligned_cols=259 Identities=17% Similarity=0.185 Sum_probs=166.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|.-++||+|+...+++.||||++.- +..+.|+..++ +....+.-..|||++.....|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inL---Ekc~~~ld~l~---kE~~~msl~~HPNIv~~~~sFv----------- 94 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINL---EKCNNDLDALR---KEVQTMSLIDHPNIVTYHCSFV----------- 94 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeeh---hhhhhhHHHHH---HHHHHhhhcCCCCcceEEEEEE-----------
Confidence 679999999999999999999999999862 23344433332 2223333344666555433221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
.....|+||.||.||++.++.... ..|+++ ...+-+++..||.|+|.+|.|
T Consensus 95 --------------------------v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~I 148 (516)
T KOG0582|consen 95 --------------------------VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHI 148 (516)
T ss_pred --------------------------ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCce
Confidence 236779999999999999985532 334443 344457788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHH-HHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|||+|+|||||+.+|.|+|.|||.+..+-.. .|.. +..++....+..||.+...+ .|| +.+.||||||.+.-|+
T Consensus 149 HRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~--~GY-dfKaDIwSfGITA~EL 225 (516)
T KOG0582|consen 149 HRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQL--HGY-DFKADIWSFGITACEL 225 (516)
T ss_pred ecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcc--cCc-cchhhhhhhhHHHHHH
Confidence 9999999999999999999999988776432 2211 11111122223344432221 344 7788999999888888
Q ss_pred HHHhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 368 FDDALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 368 ~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
..+- .|+..+. ++.++..+. +-||.+ . ....++ .. .+..+...
T Consensus 226 A~G~--aPf~k~pPmkvLl~tLq--------n~pp~~---------------------~--t~~~~~--d~-~k~~~ksf 269 (516)
T KOG0582|consen 226 AHGH--APFSKYPPMKVLLLTLQ--------NDPPTL---------------------L--TSGLDK--DE-DKKFSKSF 269 (516)
T ss_pred hcCC--CCcccCChHHHHHHHhc--------CCCCCc---------------------c--cccCCh--HH-hhhhcHHH
Confidence 7643 3444433 111111110 111111 0 001111 00 11235588
Q ss_pred HHHHHHHHhhcCcccccccchhhccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
|..+..||.+||.+|.++.+-+.|+||.
T Consensus 270 ~e~i~~CL~kDP~kRptAskLlkh~FFk 297 (516)
T KOG0582|consen 270 REMIALCLVKDPSKRPTASKLLKHAFFK 297 (516)
T ss_pred HHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence 9999999999999999999999999994
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.9e-26 Score=227.67 Aligned_cols=251 Identities=20% Similarity=0.224 Sum_probs=164.2
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||-|+||.||+|..+.++-..|-|++-......+..-+-.+..++ .-.||+++.+++.|.
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa-------~CdHP~ivkLl~ayy------------ 99 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILA-------ECDHPVIVKLLSAYY------------ 99 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhh-------cCCChHHHHHHHHHh------------
Confidence 3899999999999999888888999986554443322222222222 234777777777653
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH--HhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI--ESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+.+..||..|||.||.++.+... +....+..+++..+++-+|.|||+.+||||
T Consensus 100 -------------------------~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHR 154 (1187)
T KOG0579|consen 100 -------------------------FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHR 154 (1187)
T ss_pred -------------------------ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhh
Confidence 23777899999999998776432 223356778888999999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|.||||++-+|.|+|+|||.+...... .|.+|.|+.+.|+ |+.+..+...-.-++...||||||.+|-+|..
T Consensus 155 DLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMA---PEVvmCET~KD~PYDykaDiWSlGITLIEMAq- 230 (1187)
T KOG0579|consen 155 DLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMA---PEVVMCETFKDQPYDYKADIWSLGITLIEMAQ- 230 (1187)
T ss_pred hccccceEEEecCcEeeecccccccchhHHhhhccccCCccccc---chheeeccccCCCchhhhhHHhhhhHHHHHhc-
Confidence 99999999999999999999998776443 4455666533332 22222221111122444566666666655543
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
...|-.+.+ .+|.++. ++.+-.|. +. .....+...+|.+
T Consensus 231 -iEPPHheln-------------------------pMRVllK---iaKSePPT----------Ll--qPS~Ws~~F~DfL 269 (1187)
T KOG0579|consen 231 -IEPPHHELN-------------------------PMRVLLK---IAKSEPPT----------LL--QPSHWSRSFSDFL 269 (1187)
T ss_pred -cCCCccccc-------------------------hHHHHHH---HhhcCCCc----------cc--CcchhhhHHHHHH
Confidence 122222222 2222211 11111111 00 0012356788999
Q ss_pred HHHHhhcCcccccccchhhccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
..||.+||+.||...+-+.|+||.
T Consensus 270 k~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 270 KRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred HHHHhcCCccCCCHHHHhhCcccc
Confidence 999999999999999999999996
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-25 Score=215.89 Aligned_cols=142 Identities=16% Similarity=0.243 Sum_probs=104.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|.+|.||+|+++.++..+|+||+....... .+-++++....+.+....||
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~----rkKl~Ra~tE~eIL~~lDHP--------------------- 137 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS----RKKLKRAQTEREILSLLDHP--------------------- 137 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh----hhHHHHHHHHHHHHHhcCCC---------------------
Confidence 67999999999999999889999999986431111 11122222222222222233
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCC--ceEEEeecCCCCcCcHHHHHh---cCCCHHHHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSG--KVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~--~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~lh~~g 288 (487)
.+|..|..+.+. .||+||||+||+|..+.+... ......+.+...+..||+|||-.|
T Consensus 138 ------------------FlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG 199 (459)
T KOG0610|consen 138 ------------------FLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG 199 (459)
T ss_pred ------------------ccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc
Confidence 355555544443 479999999999988754322 235678899999999999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
||.|||||+||||.++|+|.|.||-++...
T Consensus 200 ivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 200 IVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred eeeccCCcceeEEecCCcEEeeeccccccC
Confidence 999999999999999999999999988754
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-25 Score=230.33 Aligned_cols=195 Identities=17% Similarity=0.160 Sum_probs=124.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|..+.+|+.||||++...... . -..+ +.+ ..
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~--~~~~--------------------------~~~------~~ 50 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF--K--KDQL--------------------------AHV------KA 50 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH--H--hHHH--------------------------HHH------HH
Confidence 6799999999999999989999999998532100 0 0000 011 11
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ +++. +++++ .......++||||++|++|.++.... .........+..++..+|.|||+.||+
T Consensus 51 E~~il~~l-----~hp~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~giv 123 (377)
T cd05629 51 ERDVLAES-----DSPW--VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFI 123 (377)
T ss_pred HHHHHHhC-----CCCC--cceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 22211111 1222 22222 22345678999999999998764321 122334455667888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-----------------------------------HHH------H
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-----------------------------------IIG------H 329 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-----------------------------------~~~------~ 329 (487)
||||||+|||++.+|.++|+|||+++.+....... ... .
T Consensus 124 HrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (377)
T cd05629 124 HRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL 203 (377)
T ss_pred ccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc
Confidence 99999999999999999999999986432110000 000 0
Q ss_pred HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 330 VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
......+.+..++++.+...-.+.++|+||+|+.+++++++.
T Consensus 204 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~ 245 (377)
T cd05629 204 MAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGW 245 (377)
T ss_pred cccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCC
Confidence 000011333444555544444578899999999999999854
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-25 Score=220.05 Aligned_cols=197 Identities=16% Similarity=0.117 Sum_probs=126.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+.+.+++.||||++++..... ..+. +. +..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~-----------------------------~~------~~~ 49 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDV-----------------------------EC------TMV 49 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------HH------HHH
Confidence 67999999999999999889999999987431100 0000 00 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|.+.+..+ ...+.+..-.-+.......++||||++|++|.+...... ........+..++..++.|+|+.|++||
T Consensus 50 e~~~l~~~----~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~ 125 (324)
T cd05587 50 EKRVLALP----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYR 125 (324)
T ss_pred HHHHHHhc----CCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 22222211 122222111112233456799999999999977643221 2233344556788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPE--EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+||+|||++.+|.++|+|||++..... ....... +.+..++++....+..+.++|+||+|+.+++++++
T Consensus 126 dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG 197 (324)
T cd05587 126 DLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFC--------GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 197 (324)
T ss_pred CCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeec--------CCccccChhhhcCCCCCcccchhhhHHHHHHHHhC
Confidence 9999999999999999999999875321 1111111 22333444444444557889999999999999984
Q ss_pred hccCCCCcCc
Q 011399 371 ALNSSVSELN 380 (487)
Q Consensus 371 ~~~~~~~~~~ 380 (487)
. .|+...+
T Consensus 198 ~--~pf~~~~ 205 (324)
T cd05587 198 Q--PPFDGED 205 (324)
T ss_pred C--CCCCCCC
Confidence 3 3444433
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-25 Score=232.16 Aligned_cols=285 Identities=15% Similarity=0.055 Sum_probs=164.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+++.||||+++..... ......|+.++.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~----------------------------------~~~~~~e~~~l~ 180 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKY----------------------------------TRDAKIEIQFME 180 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchhh----------------------------------HHHHHHHHHHHH
Confidence 6799999999999999888999999998632100 001111222222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH-CCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE-YGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~-~givH 291 (487)
+.+.... ......+.+...+.......++|||++ |++|.++.... .........+..++..||.|||. .||+|
T Consensus 181 ~l~~~~~----~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiH 255 (467)
T PTZ00284 181 KVRQADP----ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMH 255 (467)
T ss_pred HHhhcCc----ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 2211100 000112223333333345678999998 55666553221 22233445566788899999998 59999
Q ss_pred cCCCCCCeEEcCCC----------------cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 011399 292 ADPHPGNLLATPEG----------------KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV 355 (487)
Q Consensus 292 ~Dlkp~Nili~~~g----------------~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (487)
|||||+|||++.+| .+||+|||.+....... ..+++ .+.+++++++..+..+.++
T Consensus 256 rDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~-~~~~g--------t~~Y~APE~~~~~~~~~~~ 326 (467)
T PTZ00284 256 TDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR-TAIVS--------TRHYRSPEVVLGLGWMYST 326 (467)
T ss_pred CCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccc-ccccC--------CccccCcHHhhcCCCCcHH
Confidence 99999999998765 49999999876533221 11222 2233333333334457789
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHH-----HHHHHHHHhhhhhCCCCChHHhH
Q 011399 356 DVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALIL-----RSLTVLEGLALYADPNFKVLAAS 430 (487)
Q Consensus 356 Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~-----r~l~~leg~~~~ldP~~~~~~~~ 430 (487)
|+||+||.+++++++. .++...+....+..+...+ -.+|..+.... +.+.. ....+.|..+.....
T Consensus 327 DiwSlGvil~elltG~--~pf~~~~~~~~~~~i~~~~----g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 397 (467)
T PTZ00284 327 DMWSMGCIIYELYTGK--LLYDTHDNLEHLHLMEKTL----GRLPSEWAGRCGTEEARLLYN---SAGQLRPCTDPKHLA 397 (467)
T ss_pred HHHHHHHHHHHHHhCC--CCCCCCChHHHHHHHHHHc----CCCCHHHHhhccchhHHHHhh---hcccccccCCHHHHH
Confidence 9999999999999854 4555444333333332222 23344432110 11100 011122322221110
Q ss_pred hHHHHHHhc-cCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 431 YPYFAKRLL-TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 431 ~p~~~~~l~-~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
...-...+. ...++.+++++.+||+.||.+|++..+.+.|+||.-
T Consensus 398 ~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 398 RIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred hhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence 000000000 013678899999999999999999999999999964
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=223.52 Aligned_cols=245 Identities=17% Similarity=0.139 Sum_probs=154.2
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||.||+|+++.+|+.||||+++...... ..+... +..|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~-----------------------------------~~~e 45 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-DDDVEC-----------------------------------TMTE 45 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHH-----------------------------------HHHH
Confidence 5899999999999999889999999987432110 000000 0111
Q ss_pred HHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 215 GQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
...+.. ..+++. +++++ .......++||||++|++|.+..... .........+..++..++.|||+.|++|
T Consensus 46 ~~il~~----~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH 119 (318)
T cd05570 46 KRVLAL----AGKHPF--LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIY 119 (318)
T ss_pred HHHHHh----ccCCCC--ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEc
Confidence 111111 111222 22222 12345678999999999997664322 1223334455678888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+||+||+++.+|.++|+|||+++..... .....+ +++..++++....+..+.++|+||+|+.++++++
T Consensus 120 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~ 191 (318)
T cd05570 120 RDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC--------GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA 191 (318)
T ss_pred cCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee--------cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh
Confidence 999999999999999999999998653211 111111 2233444444444556788999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+.......+. . ..+.+ ....++..++.
T Consensus 192 G~--~pf~~~~~~~~~~~i~----~-------------------------~~~~~--------------~~~~~~~~~~l 226 (318)
T cd05570 192 GQ--SPFEGDDEDELFQSIL----E-------------------------DEVRY--------------PRWLSKEAKSI 226 (318)
T ss_pred CC--CCCCCCCHHHHHHHHH----c-------------------------CCCCC--------------CCcCCHHHHHH
Confidence 43 3444333222211110 0 00110 01235677888
Q ss_pred HHHHHhhcCcccccc-----cchhhccccc
Q 011399 450 LVELLFKDGRFRHVL-----YSPFTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~r~~~-----~~~~~~~~~~ 474 (487)
+.+||..||+.|++. .+.+.|+||.
T Consensus 227 i~~~l~~dP~~R~s~~~~~~~~ll~~~~~~ 256 (318)
T cd05570 227 LKSFLTKNPEKRLGCLPTGEQDIKGHPFFR 256 (318)
T ss_pred HHHHccCCHHHcCCCCCCCHHHHhcCCCcC
Confidence 889999999999888 7788888884
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-26 Score=230.03 Aligned_cols=291 Identities=18% Similarity=0.186 Sum_probs=165.1
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.. +.||+|+||.||+|+++.+|..||+|+.+......... .+...++.+....|++++++.+
T Consensus 7 y~~~--~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~------~~~~E~~~l~~l~h~~iv~~~~-------- 70 (331)
T cd06649 7 FERI--SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRN------QIIRELQVLHECNSPYIVGFYG-------- 70 (331)
T ss_pred ceEE--EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHH------HHHHHHHHHHHCCCCCCCeEEE--------
Confidence 4444 67999999999999999899999999987542211100 0000000111111222222221
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
++ ...+..++||||++|++|.++..... ........+..++..++.|+|+
T Consensus 71 ----------------------------~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~ 121 (331)
T cd06649 71 ----------------------------AF-YSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE 121 (331)
T ss_pred ----------------------------EE-EECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 11 22356789999999999988754322 1222334555778889999998
Q ss_pred C-CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 287 Y-GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~-givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
. +++|+|+||+||+++.+|.++|+|||+++.+......... +++..++++....+..+.+.|+||+|+.++
T Consensus 122 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------g~~~y~aPE~~~~~~~~~~~DiwslG~il~ 193 (331)
T cd06649 122 KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------GTRSYMSPERLQGTHYSVQSDIWSMGLSLV 193 (331)
T ss_pred cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC--------CCcCcCCHhHhcCCCCCchHhHHHHHHHHH
Confidence 5 6999999999999999999999999999876543222111 222233333334445678899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHH-HHHHHHhhhhhCCCCChHHhHhHHHHHH-----hc
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRS-LTVLEGLALYADPNFKVLAASYPYFAKR-----LL 439 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~-l~~leg~~~~ldP~~~~~~~~~p~~~~~-----l~ 439 (487)
+++++.. |+...+...+...++.....-.-..+.......+. .....+.+....|....... ..++... ..
T Consensus 194 el~tg~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 270 (331)
T cd06649 194 ELAIGRY--PIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFEL-LDYIVNEPPPKLPN 270 (331)
T ss_pred HHHhCCC--CCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHH-HHHHHhCCCcCCCC
Confidence 9998543 44333333322222211100000000000000000 00000000000111110000 0011000 00
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
...++++++.+.+||.+||+.|++.-+.+.|+||.
T Consensus 271 ~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~ 305 (331)
T cd06649 271 GVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK 305 (331)
T ss_pred ccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence 12467899999999999999999999999999994
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-25 Score=218.88 Aligned_cols=199 Identities=16% Similarity=0.115 Sum_probs=126.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|..+.+|+.||||+++...... ..+.. . +..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~-----------------------------~------~~~ 49 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDVE-----------------------------C------TMV 49 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH-----------------------------H------HHH
Confidence 67999999999999999899999999986321100 00000 0 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.. ..+++.+..-..........++||||++|++|.+..... .........+..++..|+.|+|+.|++||
T Consensus 50 e~~~l~~----~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHr 125 (323)
T cd05615 50 EKRVLAL----QDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYR 125 (323)
T ss_pred HHHHHHh----ccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 1111111 111122111111122335578999999999997764321 12233445566788889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|+||+|||++.+|.++|+|||++......... . ....+++..++++....+..+.++|+||+|+.+++++++.
T Consensus 126 Dikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~--~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~- 198 (323)
T cd05615 126 DLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT--T----RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ- 198 (323)
T ss_pred CCCHHHeEECCCCCEEEeccccccccCCCCcc--c----cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCC-
Confidence 99999999999999999999998764322100 0 0011233344444444555678899999999999999843
Q ss_pred cCCCCcCc
Q 011399 373 NSSVSELN 380 (487)
Q Consensus 373 ~~~~~~~~ 380 (487)
.|+...+
T Consensus 199 -~pf~~~~ 205 (323)
T cd05615 199 -PPFDGED 205 (323)
T ss_pred -CCCCCCC
Confidence 3444443
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-25 Score=222.74 Aligned_cols=285 Identities=17% Similarity=0.166 Sum_probs=158.9
Q ss_pred CcccccccccEEEEEEEc--cCCcEEEEEEecCC-hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 133 PSPIAAASLGQVYKAQLK--YSGQIVAVKVQRPG-IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~-~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
...||+|+||.||+|+.+ .+++.||+|.+... .......++.+++. ..|+|++++.+.+..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~----------l~h~niv~~~~~~~~------ 69 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRE----------LKHPNVISLQKVFLS------ 69 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHh----------cCCCCCcceeeeEec------
Confidence 467999999999999975 35789999988643 12222222222221 235665555432210
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh----------cCCCHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES----------QGLKVLDLVNTGIQC 279 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~----------~~~~~~~~~~~~i~~ 279 (487)
......+++|||+.+ ++.++..... ........+..++..
T Consensus 70 -----------------------------~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~ 119 (317)
T cd07868 70 -----------------------------HADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 119 (317)
T ss_pred -----------------------------CCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHH
Confidence 112345799999976 5555432211 112234556788999
Q ss_pred HHHHHHHCCccccCCCCCCeEE----cCCCcEEEEecCCCCCCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLA----TPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYALDFLSP 353 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili----~~~g~i~l~DFGla~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (487)
|+.|||+.|++|||+||+|||+ +.+|.++|+|||+++.++..... .......+..+..||.+. .....+.
T Consensus 120 al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~----~~~~~~~ 195 (317)
T cd07868 120 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL----GARHYTK 195 (317)
T ss_pred HHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHc----CCCCcCc
Confidence 9999999999999999999999 45678999999999876432110 011111222334444431 1233577
Q ss_pred CCCcchHHHHHHHHHHHhccCCCCcCcHH----HHHHHHHHHHhhCCCCCChHHHHHHHHH----HHHHHhhhhhCCCCC
Q 011399 354 DVDVTPIVPALRNFFDDALNSSVSELNFK----TIVDGLGAVLYQYPFNVPAYYALILRSL----TVLEGLALYADPNFK 425 (487)
Q Consensus 354 ~~Di~sl~~~l~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~p~~~~~l~r~l----~~leg~~~~ldP~~~ 425 (487)
++|+||+|+.+++++++.........+.. .....+..+........+..+... +.+ ..+...........+
T Consensus 196 ~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 274 (317)
T cd07868 196 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDI-KKMPEHSTLMKDFRRNTYTNCS 274 (317)
T ss_pred hhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHH-hhccchhhhhhhhhccccCccc
Confidence 89999999999999975321111110000 001111222221111111111110 000 000000000000000
Q ss_pred hHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 426 VLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 426 ~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
...++. .....+++.+.+.+.+||..||.+|++..+.+.|+||
T Consensus 275 ----~~~~~~-~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 275 ----LIKYME-KHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred ----ccchHH-hcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 001111 1122457788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-25 Score=218.58 Aligned_cols=251 Identities=16% Similarity=0.136 Sum_probs=155.6
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||+|+||+||+++.+.+|+.||+|++.......... ... ...|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~------------------------------~~~------~~~E~ 44 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSG------------------------------EKM------ALLEK 44 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchh------------------------------hHH------HHHHH
Confidence 699999999999998899999999986321110000 000 11122
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHH--HHHHHHHHHHHHHHHCCcccc
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLD--LVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~--~~~~~i~~~l~~lh~~givH~ 292 (487)
..+.++ +++.+.-..-+.+.....++||||++|++|.+..... ..+.+... .+..++..++.++|+.|++|+
T Consensus 45 ~il~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~ 119 (277)
T cd05607 45 EILEKV-----NSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYR 119 (277)
T ss_pred HHHHhc-----CCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEc
Confidence 222221 2233222111223345678999999999997764322 22344443 345678889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|+||+||+++.++.++|+|||++..+...... . ...+.+..++++....+..+.++|+||+|+.+++++++..
T Consensus 120 dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~--~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~ 192 (277)
T cd05607 120 DMKPENVLLDDQGNCRLSDLGLAVELKDGKTI--T-----QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRT 192 (277)
T ss_pred cCChHhEEEcCCCCEEEeeceeeeecCCCcee--e-----ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCC
Confidence 99999999999999999999998776432110 0 0112223334444444556788999999999999998443
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
|+....-......+ .+.. +...... .....+++.++.+..
T Consensus 193 --p~~~~~~~~~~~~~------------------~~~~---------~~~~~~~-----------~~~~~~~~~~~li~~ 232 (277)
T cd05607 193 --PFKDHKEKVAKEEL------------------KRRT---------LEDEVKF-----------EHQNFTEESKDICRL 232 (277)
T ss_pred --CCCCCcchhhHHHH------------------HHHh---------hcccccc-----------ccccCCHHHHHHHHH
Confidence 33221110000000 0000 0011000 011357788999999
Q ss_pred HHhhcCcccccc----cchhhccccc
Q 011399 453 LLFKDGRFRHVL----YSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~~----~~~~~~~~~~ 474 (487)
||.+||..|++. .+...|+||.
T Consensus 233 ~L~~~P~~R~~~~~~~~~~~~h~~f~ 258 (277)
T cd05607 233 FLAKKPEDRLGSREKNDDPRKHEFFK 258 (277)
T ss_pred HhccCHhhCCCCccchhhhhcChhhc
Confidence 999999999998 4566899994
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-26 Score=230.37 Aligned_cols=202 Identities=16% Similarity=0.194 Sum_probs=130.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+.+.+|+.||||+++...... .+....+..
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~~~~~~~~------ 50 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE------------------------------KEQVAHIRA------ 50 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh------------------------------hhhHHHHHH------
Confidence 77999999999999999899999999987321000 000011111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+..+ +++. +++.+ .......++||||++|++|.++.... .........+..++..++.|+|+.|++
T Consensus 51 e~~~l~~l-----~~~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~giv 123 (360)
T cd05627 51 ERDILVEA-----DGAW--VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFI 123 (360)
T ss_pred HHHHHHhC-----CCCC--EeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 22222111 1222 22222 23345679999999999998874322 223344556678888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH-----------------------------HHHHHHhcCHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-----------------------------HVVHMVNRDYEAM 341 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~-----------------------------~~~~~~~~~~~~~ 341 (487)
||||||+|||++.+|.++|+|||++..+.......+.. .......+.+..+
T Consensus 124 HrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 203 (360)
T cd05627 124 HRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYI 203 (360)
T ss_pred ccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcccc
Confidence 99999999999999999999999988664321110000 0000112334455
Q ss_pred HHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc
Q 011399 342 ARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN 380 (487)
Q Consensus 342 ~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~ 380 (487)
++++..-...+..+|+||+|+.+++++++. .|+...+
T Consensus 204 APE~~~~~~~~~~~DiwSlGvilyel~tG~--~Pf~~~~ 240 (360)
T cd05627 204 APEVFMQTGYNKLCDWWSLGVIMYEMLIGY--PPFCSET 240 (360)
T ss_pred CHHHHcCCCCCCcceeccccceeeecccCC--CCCCCCC
Confidence 555554445578899999999999999754 3444333
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-25 Score=223.63 Aligned_cols=224 Identities=17% Similarity=0.191 Sum_probs=148.6
Q ss_pred cccccccccEEEEEEEccCCcE-EEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQI-VAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~-VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.+|+|+||+||+|.++ |+. ||||++.+.-..... .+.+...+..+....|+|++.++..
T Consensus 47 ~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-----~~~f~~E~~il~~l~HpNIV~f~G~------------ 107 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-----RKAFRREASLLSRLRHPNIVQFYGA------------ 107 (362)
T ss_pred hhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-----HHHHHHHHHHHHhCCCCCeeeEEEE------------
Confidence 44999999999999996 666 999999765322110 1111111111122335555554432
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHH--HHHHHHHHHHHHHCC-
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLV--NTGIQCSLRQLLEYG- 288 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~--~~~i~~~l~~lh~~g- 288 (487)
..+-....+|||||++||+|.++.... ...++....+ ..++..|+.|+|+.+
T Consensus 108 ------------------------~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~ 163 (362)
T KOG0192|consen 108 ------------------------CTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP 163 (362)
T ss_pred ------------------------EcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 222112468999999999999986552 3445555444 456777999999999
Q ss_pred ccccCCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH--cCCCCCCCCcchHHHHHH
Q 011399 289 YFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA--LDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~Di~sl~~~l~ 365 (487)
|||||+||.|||++.++ .+||+|||+++...... ...+-..+.+.+|++++++ ...++.++|++|||..++
T Consensus 164 iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlW 237 (362)
T KOG0192|consen 164 IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLW 237 (362)
T ss_pred eeecccChhhEEEcCCCCEEEECCCccceeecccc------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHH
Confidence 99999999999999998 99999999998765431 0011134557778888887 456799999999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHH--hhCCCCCChHHHHHHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVL--YQYPFNVPAYYALILR 408 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~p~~~~~l~r 408 (487)
|++++ ..|+......++...+...- ...+...|+.+..++.
T Consensus 238 El~t~--~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~ 280 (362)
T KOG0192|consen 238 ELLTG--EIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLME 280 (362)
T ss_pred HHHHC--CCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHH
Confidence 99984 35777766544444332111 1223345566554443
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.6e-25 Score=216.04 Aligned_cols=252 Identities=17% Similarity=0.150 Sum_probs=155.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|....+|+.||||++.......... +..+.+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~------------------------------------~~~~~~ 49 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG------------------------------------EAMALN 49 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhh------------------------------------HHHHHH
Confidence 67999999999999998889999999986432111000 111222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|+..+.++. ++.+.-..-........++||||++|++|.+...... ...+. ...+..++..++.|+|+.|++
T Consensus 50 E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 124 (285)
T cd05605 50 EKQILEKVN-----SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124 (285)
T ss_pred HHHHHHhcC-----CCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 332222221 1221111111122356789999999999987643321 22333 344567888899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||.||++++++.++|+|||++..+...... .+.. +....++++...-+..+.+.|+||+|+.+++++++
T Consensus 125 H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~--~~~~-----~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g 197 (285)
T cd05605 125 YRDLKPENILLDDYGHIRISDLGLAVEIPEGETI--RGRV-----GTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEG 197 (285)
T ss_pred ecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc--cccc-----CCCCccCcHHhcCCCCCccccchhHHHHHHHHHHC
Confidence 9999999999999999999999998876432110 0111 11222333333344557789999999999999974
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+.......+...+.. ..+. .....++..++.+
T Consensus 198 ~--~pf~~~~~~~~~~~~~~~~~~-------------------------~~~~--------------~~~~~~~~~~~li 236 (285)
T cd05605 198 K--SPFRQRKEKVKREEVERRVKE-------------------------DQEE--------------YSEKFSEAARSIC 236 (285)
T ss_pred C--CCCCCCchhhHHHHHHHHhhh-------------------------cccc--------------cCcccCHHHHHHH
Confidence 3 344332221111111110000 0000 0113466778889
Q ss_pred HHHHhhcCcccc-----cccchhhccccc
Q 011399 451 VELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
.+||..||..|+ +.-+.+.|+||.
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~ 265 (285)
T cd05605 237 RQLLTKDPGFRLGCRGEGAEEVKAHPFFR 265 (285)
T ss_pred HHHccCCHHHhcCCCCCCHHHHhcCcCcc
Confidence 999999999999 666888888885
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=217.67 Aligned_cols=189 Identities=19% Similarity=0.154 Sum_probs=124.9
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||+||+|+.+.+|+.||||+++...... ..+. +. +..|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~------~~~e 45 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DEDI-----------------------------DW------VQTE 45 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------HH------HHHH
Confidence 5999999999999999899999999987432110 0000 01 1112
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
...+.+ ...++.+.-..-.....+..++||||++|++|.+..... .........+..++..++.|||+.|++|||
T Consensus 46 ~~~~~~----~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrD 121 (327)
T cd05617 46 KHVFEQ----ASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRD 121 (327)
T ss_pred HHHHHh----hcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 211111 122333222222223346679999999999997654322 223334455667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCH-H-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPE-E-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|||+|||++.+|.++|+|||++..... . .....+ +.+..++++....+..+.++|+||+|+.+++++++.
T Consensus 122 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~ 193 (327)
T cd05617 122 LKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC--------GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGR 193 (327)
T ss_pred CCHHHEEEeCCCCEEEeccccceeccCCCCceeccc--------CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCC
Confidence 999999999999999999999875321 1 111112 223334444444455678899999999999999853
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-26 Score=228.48 Aligned_cols=256 Identities=18% Similarity=0.259 Sum_probs=170.6
Q ss_pred CCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC-----hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHH
Q 011399 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-----IEEAIGLDFYLIRGVGFLINKYVDIITTDVVA 196 (487)
Q Consensus 122 ~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-----~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~ 196 (487)
.++..+|+-|.++.+|+|.||.||-|.++.+|+.||||++.+- .+++++.++++|
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaIL-------------------- 617 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAIL-------------------- 617 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHH--------------------
Confidence 3567888999889999999999999999999999999998521 222222222222
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc--CCCHHHHHH
Q 011399 197 LIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--GLKVLDLVN 274 (487)
Q Consensus 197 ~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~~~~~~ 274 (487)
+++ +++.|..-....+...+.+.|||-+.|.-|..+...++. +....+++.
T Consensus 618 ----------------------q~l-----~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlv 670 (888)
T KOG4236|consen 618 ----------------------QNL-----HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLV 670 (888)
T ss_pred ----------------------Hhc-----CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHH
Confidence 111 344554444455556777899999999777666554433 344567778
Q ss_pred HHHHHHHHHHHHCCccccCCCCCCeEEcCC---CcEEEEecCCCCCCCHH-HHHHHHHHHHHHHhcCHHHHHHHHH-HcC
Q 011399 275 TGIQCSLRQLLEYGYFHADPHPGNLLATPE---GKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYY-ALD 349 (487)
Q Consensus 275 ~~i~~~l~~lh~~givH~Dlkp~Nili~~~---g~i~l~DFGla~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~g 349 (487)
.||..||+|||..||+|+|+||+|||+... -++||+|||.++.+.++ .|.+..|+ |.+++++.. ..|
T Consensus 671 tQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGT--------PAYLaPEVLrnkG 742 (888)
T KOG4236|consen 671 TQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGT--------PAYLAPEVLRNKG 742 (888)
T ss_pred HHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCC--------ccccCHHHHhhcc
Confidence 899999999999999999999999999754 46999999999999876 55555554 333443333 345
Q ss_pred CCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHh
Q 011399 350 FLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA 429 (487)
Q Consensus 350 ~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~ 429 (487)
| ....|+||.|..+|--+.+.+ |+.+.. ++-+++. .-.|-.||+
T Consensus 743 y-NrSLDMWSVGVIiYVsLSGTF--PFNEdE--dIndQIQ----NAaFMyPp~--------------------------- 786 (888)
T KOG4236|consen 743 Y-NRSLDMWSVGVIIYVSLSGTF--PFNEDE--DINDQIQ----NAAFMYPPN--------------------------- 786 (888)
T ss_pred c-cccccceeeeEEEEEEecccc--cCCCcc--chhHHhh----ccccccCCC---------------------------
Confidence 4 788999999998876665443 332211 1112221 112222222
Q ss_pred HhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 430 SYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 430 ~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
|| ++.++.+-+.+..+|+..-++|.+.-+.+.|+|.+-.
T Consensus 787 --PW------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 787 --PW------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred --ch------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 22 1345666667777777666677777777777776543
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-25 Score=225.51 Aligned_cols=283 Identities=18% Similarity=0.167 Sum_probs=164.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+|+.||+|+.+.........+ +.+ .++.+....|+|++.+.+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~--~~~----E~~~l~~l~h~~iv~~~~-------------- 70 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQ--IIR----ELQVLHECNSPYIVGFYG-------------- 70 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHH--HHH----HHHHHHHCCCCcccceeE--------------
Confidence 679999999999999998999999999875422211000 000 000011112333332222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH-CCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE-YGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~givH 291 (487)
.+ ......++||||++|++|.++..... ........+..++..++.|+|. +|++|
T Consensus 71 ----------------------~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH 127 (333)
T cd06650 71 ----------------------AF-YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 127 (333)
T ss_pred ----------------------EE-EECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEe
Confidence 12 12356789999999999988754321 1222333455678889999997 57999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||+|||++.+|.++|+|||++..+........ .+....++++.+..+..+.+.|+||+|+.+++++.+.
T Consensus 128 ~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~ 199 (333)
T cd06650 128 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199 (333)
T ss_pred cCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC--------CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999876643321111 1222333344444445677899999999999999754
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCC--CChHHHHHHHHHHHHHHhhhhhCCCCChHHhHh---HHHHHHh-----ccC
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFN--VPAYYALILRSLTVLEGLALYADPNFKVLAASY---PYFAKRL-----LTD 441 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~--~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~---p~~~~~l-----~~~ 441 (487)
. |+...+...+...++......+.. .++..... ........|+.+...... .++...- ...
T Consensus 200 ~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (333)
T cd06650 200 Y--PIPPPDAKELELMFGCPVEGDPAESETSPRPRPP-------GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGV 270 (333)
T ss_pred C--CCCCcchhHHHHHhcCcccCCccccccCcccCCc-------cchhhhhcccccccccHHHHHHHHhcCCCccCCCCC
Confidence 3 333333332222222111100000 00000000 000011222222111110 0110000 012
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.+++.++.+.+||.+||+.|++..+.+.|+||...
T Consensus 271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 271 FGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 46788999999999999999999999999999644
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-25 Score=227.40 Aligned_cols=202 Identities=15% Similarity=0.169 Sum_probs=130.1
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.. +.||+|+||.||+|+++.+|+.||+|++....... ..+...
T Consensus 45 y~i~--~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~-------------------------------- 89 (371)
T cd05622 45 YEVV--KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAF-------------------------------- 89 (371)
T ss_pred cEEE--EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh-hHHHHH--------------------------------
Confidence 4444 77999999999999999899999999986321000 000000
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh 285 (487)
+..|...+..+ +++.+ ++++ .......++||||++|++|.++.............+..++..++.|+|
T Consensus 90 ---~~~e~~i~~~~-----~hp~i--v~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH 159 (371)
T cd05622 90 ---FWEERDIMAFA-----NSPWV--VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 159 (371)
T ss_pred ---HHHHHHHHHhC-----CCCCC--CeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 11111111111 12221 2222 222355789999999999988754333333344556678889999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc----CCCCCCCCcchHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL----DFLSPDVDVTPIV 361 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~Di~sl~ 361 (487)
+.||+||||||+|||++.+|.++|+|||++..+......... ...+.+..++++++.. +..+.++|+||+|
T Consensus 160 ~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~-----~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlG 234 (371)
T cd05622 160 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD-----TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 234 (371)
T ss_pred HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCccccc-----CcccCccccCHHHHhccCCCccCCCccceeehh
Confidence 999999999999999999999999999999876532110000 1112233344444321 3457889999999
Q ss_pred HHHHHHHHHhccCCCCcCcH
Q 011399 362 PALRNFFDDALNSSVSELNF 381 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~ 381 (487)
+.+++++++. .|+...+.
T Consensus 235 vilyell~G~--~Pf~~~~~ 252 (371)
T cd05622 235 VFLYEMLVGD--TPFYADSL 252 (371)
T ss_pred HHHHHHHhCC--CCCCCCCH
Confidence 9999999854 45544443
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-25 Score=221.07 Aligned_cols=278 Identities=14% Similarity=0.147 Sum_probs=163.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+++.||+|+++........ .. +.+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~--~~------------------------------------~~~ 53 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAP--CT------------------------------------AIR 53 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcc--hh------------------------------------HHH
Confidence 6799999999999999889999999998643211100 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++. ++++.-..-+.......++||||+++ ++.+......... .....+..++..++.|+|+.|++|
T Consensus 54 E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH 127 (309)
T cd07872 54 EVSLLKDLK-----HANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLH 127 (309)
T ss_pred HHHHHHhCC-----CCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 222221111 11111111112223567899999987 5555432222222 334445678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+||+++.+|.++|+|||++......... ......+..+..||.+. ..+..+.++|+||+|+.+++++++.
T Consensus 128 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~il~el~tg~ 202 (309)
T cd07872 128 RDLKPQNLLINERGELKLADFGLARAKSVPTKT-YSNEVVTLWYRPPDVLL----GSSEYSTQIDMWGVGCIFFEMASGR 202 (309)
T ss_pred CCCCHHHEEECCCCCEEECccccceecCCCccc-cccccccccccCCHHHh----CCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998764322110 00111122333444321 1233467899999999999999853
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+.......+...+. ...+..+. .+.........-.|.+.. .+.. ......+++.++.+.
T Consensus 203 --~pf~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~li~ 267 (309)
T cd07872 203 --PLFPGSTVEDELHLIFRLLG---TPTEETWP----GISSNDEFKNYNFPKYKP----QPLI--NHAPRLDTEGIELLT 267 (309)
T ss_pred --CCCCCCChHHHHHHHHHHhC---CCCHHHHh----hhcchhhhhhhhcCccCC----Cchh--hhccCCCHHHHHHHH
Confidence 45555554444444333221 11111111 110000000001121111 1111 112346789999999
Q ss_pred HHHhhcCcccccccchhhcccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+||..||.+|++..+.+.|+||.-
T Consensus 268 ~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 268 KFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred HhccCChhhCCCHHHHhcChhhhh
Confidence 999999999999999999999965
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-25 Score=222.99 Aligned_cols=204 Identities=14% Similarity=0.126 Sum_probs=127.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+++++.+++.||+|++....... ...... +..
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~~~~~------~~~ 50 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK------------------------------RAETAC------FRE 50 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHH------------------------------hhHHHH------HHH
Confidence 67999999999999999889999999985210000 000000 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.. . +++.+.-..-........++||||++|++|.++........ .....+..++..++.|+|+.|++|
T Consensus 51 e~~~l~~----~-~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiH 125 (332)
T cd05623 51 ERDVLVN----G-DNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH 125 (332)
T ss_pred HHHHHhh----C-CCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 1111111 1 22322211122233456799999999999988854322223 344556678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+|||++.+|.++|+|||++..+.............+..+..||.+.......+..+.++|+||+|+.+++++.+.
T Consensus 126 rDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~ 205 (332)
T cd05623 126 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGE 205 (332)
T ss_pred cCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCC
Confidence 99999999999999999999999876543211100001112223334433211111344578899999999999999743
Q ss_pred ccCCCCcCc
Q 011399 372 LNSSVSELN 380 (487)
Q Consensus 372 ~~~~~~~~~ 380 (487)
.|+...+
T Consensus 206 --~Pf~~~~ 212 (332)
T cd05623 206 --TPFYAES 212 (332)
T ss_pred --CCCCCCC
Confidence 3444444
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-25 Score=210.04 Aligned_cols=291 Identities=19% Similarity=0.211 Sum_probs=186.0
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCC----cEEEEEEecC-----ChHHHHHHHHHHHHHHHHHHhhhhhcccCCHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSG----QIVAVKVQRP-----GIEEAIGLDFYLIRGVGFLINKYVDIITTDVV 195 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g----~~VAVKv~~p-----~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~ 195 (487)
+.+|.+=.-..||+|.+|.||+|..+.+. ..+|||.++. ++....-+++.++|++. |+|++
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~----------h~nvi 90 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK----------HPNVI 90 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc----------CCcch
Confidence 44444333367999999999999765332 3789998753 46666666666666654 88888
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc------CCCH
Q 011399 196 ALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ------GLKV 269 (487)
Q Consensus 196 ~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~------~~~~ 269 (487)
.++..|-+. ....+|+.||.+. +|-.++..++. +...
T Consensus 91 ~Lv~Vfl~~------------------------------------d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~m 133 (438)
T KOG0666|consen 91 SLVKVFLSH------------------------------------DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSM 133 (438)
T ss_pred hHHHHHhcc------------------------------------CceEEEEehhhhh-hHHHHHHHhccchhccCCHHH
Confidence 888765421 1455799999987 56555443322 2234
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCC----CcEEEEecCCCCCCCHHHHH--HHHHHHHHHHhcCHHHHHH
Q 011399 270 LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE----GKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMAR 343 (487)
Q Consensus 270 ~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~----g~i~l~DFGla~~l~~~~~~--~~~~~~~~~~~~~~~~~~~ 343 (487)
.+-+.+|+..++.|||++=++|||+||.||||..+ |.|||+|+|+++.+....+. ..-..+.+++++.||.+..
T Consensus 134 vKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG 213 (438)
T KOG0666|consen 134 VKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLG 213 (438)
T ss_pred HHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcc
Confidence 55667899999999999999999999999999977 89999999999977544221 1233456788899987632
Q ss_pred HHHHcCCCCCCCCcchHHHHHHHHHH--HhccC---------CCCcCcHHHHHHHHHHHHhhC---CCCCChHHHHHHHH
Q 011399 344 DYYALDFLSPDVDVTPIVPALRNFFD--DALNS---------SVSELNFKTIVDGLGAVLYQY---PFNVPAYYALILRS 409 (487)
Q Consensus 344 ~~~~~g~~~~~~Di~sl~~~l~~~~~--~~~~~---------~~~~~~~~~~~~~l~~~~~~~---~~~~p~~~~~l~r~ 409 (487)
.--+++.+|+|++||.+.|+++ +.+.. |+....+..++.-+|....+. .-.+ |+....+..
T Consensus 214 ----a~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~-Pe~q~~ls~ 288 (438)
T KOG0666|consen 214 ----ARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKM-PEYQTLLSD 288 (438)
T ss_pred ----cccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhC-cchHHHHHH
Confidence 2234889999999999999986 22211 111111122222222111100 0112 222222222
Q ss_pred HHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 410 LTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 410 l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
+-. .+.|+. ....|.... +..+|..-+.+.++|+.||.+|.+..+++-|.||..+..|
T Consensus 289 f~~-----~~~~n~-----sL~~~~~~~--k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 289 FRR-----HYYDNV-----SLHKYYHKH--KVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred hHH-----hhcCcc-----hHHHHHHHh--cCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 210 111110 111222221 2345668899999999999999999999999999888655
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-25 Score=237.31 Aligned_cols=206 Identities=16% Similarity=0.200 Sum_probs=142.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|+||.|+.++++.+++.||+|++.+.-- .-..|.+.++. |-|.+.
T Consensus 81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eM-lKr~~tA~F~E-----------------------------ERDimv 130 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTEKVYAMKILNKWEM-LKRAETACFRE-----------------------------ERDIMV 130 (1317)
T ss_pred HHhcccccceeEEEEeeccccchhHHHhhHHHH-hhchhHHHHHH-----------------------------HhHHHH
Confidence 789999999999999999999999998863100 00112222221 222211
Q ss_pred HH--HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EG--QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea--~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
-+ .=+.+++-.|.|..++ |+||||++||+|-.+.... ..+.++.+++...+..||.-+|+.|+|
T Consensus 131 ~~ns~Wiv~LhyAFQD~~~L-------------YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyV 197 (1317)
T KOG0612|consen 131 FGNSEWIVQLHYAFQDERYL-------------YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYV 197 (1317)
T ss_pred cCCcHHHHHHHHHhcCccce-------------EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccce
Confidence 11 1123344455555444 5999999999998774433 256778899999999999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHH-HHHhcCHHHHHHHHHH-----cCCCCCCCCcchHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV-HMVNRDYEAMARDYYA-----LDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~g~~~~~~Di~sl~~~l 364 (487)
|||+||.|||++..|+|+|+|||.+-.++.+-. +. ..+-+.|+++.+++.. .|.++++.|.||+|+.+
T Consensus 198 HRDiKPDNvLld~~GHikLADFGsClkm~~dG~------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~ 271 (1317)
T KOG0612|consen 198 HRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFM 271 (1317)
T ss_pred eccCCcceeEecccCcEeeccchhHHhcCCCCc------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHH
Confidence 999999999999999999999999888764411 11 1233455555444432 47789999999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHh
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLY 393 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 393 (487)
|||+-+ ..|+-. ..++..-++++.
T Consensus 272 YEMlyG--~TPFYa---dslveTY~KIm~ 295 (1317)
T KOG0612|consen 272 YEMLYG--ETPFYA---DSLVETYGKIMN 295 (1317)
T ss_pred HHHHcC--CCcchH---HHHHHHHHHHhc
Confidence 999852 234322 334555565553
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-25 Score=221.71 Aligned_cols=248 Identities=15% Similarity=0.139 Sum_probs=150.4
Q ss_pred cccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+++.. .+|+.||+|+++...... .+.. .
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~~~~-----------------------------------~ 44 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--RDRV-----------------------------------R 44 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--hhHH-----------------------------------H
Confidence 46999999999999863 478999999986321110 0000 0
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
+..|...+.++ +++++.-..-+.......++||||++|++|.+...... ........+..++..+|.|+|+.|+
T Consensus 45 ~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 119 (318)
T cd05582 45 TKMERDILAEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI 119 (318)
T ss_pred HHHHHHHHHhC-----CCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 11222222221 11211111111222356789999999999977643221 2223344556788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++.......... . ...+.+..++++.......+.+.|+||+|+.++++++
T Consensus 120 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~-~-----~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t 193 (318)
T cd05582 120 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA-Y-----SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 193 (318)
T ss_pred ecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCce-e-----cccCChhhcCHHHHcCCCCCCccceeccceEeeeecc
Confidence 999999999999999999999999987654331110 0 0112333444444444445778999999999999987
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+.......+. .....+| ...++.+++.
T Consensus 194 g~--~p~~~~~~~~~~~~i~----~~~~~~p---------------------------------------~~~~~~~~~l 228 (318)
T cd05582 194 GS--LPFQGKDRKETMTMIL----KAKLGMP---------------------------------------QFLSPEAQSL 228 (318)
T ss_pred CC--CCCCCCCHHHHHHHHH----cCCCCCC---------------------------------------CCCCHHHHHH
Confidence 43 3443333222221111 0001111 1235667778
Q ss_pred HHHHHhhcCccccccc-----chhhccccc
Q 011399 450 LVELLFKDGRFRHVLY-----SPFTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~-----~~~~~~~~~ 474 (487)
+..||.+||..|++.. +.+.|+||.
T Consensus 229 i~~~l~~~P~~R~~a~~~~~~~~~~~~~~~ 258 (318)
T cd05582 229 LRALFKRNPANRLGAGPDGVEEIKRHPFFS 258 (318)
T ss_pred HHHHhhcCHhHcCCCCCCCHHHHhCCCCcC
Confidence 8888888888888843 366777774
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-25 Score=214.59 Aligned_cols=252 Identities=17% Similarity=0.145 Sum_probs=158.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|..+.+|+.||||...+....... .... +..
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~------------------------------~~~~------~~~ 49 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK------------------------------GESM------ALN 49 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH------------------------------HHHH------HHH
Confidence 6799999999999999989999999988643211100 0001 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~--~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ . ++.+.............++||||++|++|.+..... ..+.+ ....+..++..++.|+|+.|++
T Consensus 50 E~~il~~l----~-~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05630 50 EKQILEKV----N-SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV 124 (285)
T ss_pred HHHHHHhC----C-CCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 22222222 1 122211111122235678999999999998765322 12233 3444557788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||+||+++.++.++|+|||++......... ... .+.+..++++....+..+.+.|+||+|+.+++++++
T Consensus 125 H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~--~~~-----~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g 197 (285)
T cd05630 125 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI--KGR-----VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 197 (285)
T ss_pred eCCCCHHHEEECCCCCEEEeeccceeecCCCccc--cCC-----CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhC
Confidence 9999999999999999999999998765432110 011 122233344444455567889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+............ ..+ .... ........++..++.+
T Consensus 198 ~--~Pf~~~~~~~~~~~~-------------------~~~------~~~~--------------~~~~~~~~~~~~~~li 236 (285)
T cd05630 198 Q--SPFQQRKKKIKREEV-------------------ERL------VKEV--------------QEEYSEKFSPDARSLC 236 (285)
T ss_pred C--CCCCCCCccchHHHH-------------------Hhh------hhhh--------------hhhcCccCCHHHHHHH
Confidence 3 333221100000000 000 0000 0011224567889999
Q ss_pred HHHHhhcCccccc-----ccchhhccccc
Q 011399 451 VELLFKDGRFRHV-----LYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~-----~~~~~~~~~~~ 474 (487)
.+||..||..|++ ..+.+.|+||.
T Consensus 237 ~~~l~~~p~~R~s~~~~~~~~~~~h~~~~ 265 (285)
T cd05630 237 KMLLCKDPKERLGCQGGGAREVKEHPLFK 265 (285)
T ss_pred HHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence 9999999999998 77899999995
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-25 Score=223.38 Aligned_cols=250 Identities=16% Similarity=0.124 Sum_probs=149.4
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||+|+||.||+|+++.+|+.||||++...... ...... ....|.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~---~~~~~~---------------------------------~~~~e~ 44 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV---AKKEVA---------------------------------HTIGER 44 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh---hhhHHH---------------------------------HHHHHH
Confidence 69999999999999989999999998522100 000000 001111
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccCC
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHADP 294 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~Dl 294 (487)
..+.+. .+.+++.+.--.......+..++||||++|++|.+..... .........+..++..++.|||+.|++||||
T Consensus 45 ~~l~~~--~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDl 122 (330)
T cd05586 45 NILVRT--LLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDL 122 (330)
T ss_pred HHHHHh--ccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence 111110 1112332221111223345679999999999997664322 1223344455678889999999999999999
Q ss_pred CCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 295 HPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 295 kp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||.|||++.+|.++|+|||++....... ....+++ ..+..||.+. .....+..+|+||+|+.+++++++.
T Consensus 123 kp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt---~~y~aPE~~~----~~~~~~~~~DvwslGvil~elltG~- 194 (330)
T cd05586 123 KPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT---TEYLAPEVLL----DEKGYTKHVDFWSLGVLVFEMCCGW- 194 (330)
T ss_pred CHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC---ccccCHHHHc----CCCCCCCccceeccccEEEEeccCC-
Confidence 9999999999999999999987643221 1112222 2233344331 1123477899999999999998753
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+.......+.. ....+ |. ...++..++.+.+
T Consensus 195 -~Pf~~~~~~~~~~~i~~----~~~~~----------------------~~----------------~~~~~~~~~li~~ 231 (330)
T cd05586 195 -SPFYAEDTQQMYRNIAF----GKVRF----------------------PK----------------NVLSDEGRQFVKG 231 (330)
T ss_pred -CCCCCCCHHHHHHHHHc----CCCCC----------------------CC----------------ccCCHHHHHHHHH
Confidence 23333332222111100 00000 00 1235677788888
Q ss_pred HHhhcCccccc----ccchhhccccc
Q 011399 453 LLFKDGRFRHV----LYSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~----~~~~~~~~~~~ 474 (487)
||..||..|++ ..+.+.|+||.
T Consensus 232 ~L~~~P~~R~~~~~~~~~ll~h~~~~ 257 (330)
T cd05586 232 LLNRNPQHRLGAHRDAVELKEHPFFA 257 (330)
T ss_pred HcCCCHHHCCCCCCCHHHHhcCcccc
Confidence 88888888884 45667788884
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-25 Score=221.75 Aligned_cols=199 Identities=13% Similarity=0.157 Sum_probs=128.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+.+.+++.||+|++....... ..+. .. +..
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~------~~~ 50 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK-RAET-----------------------------AC------FRE 50 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh-hHHH-----------------------------HH------HHH
Confidence 67999999999999999899999999986321000 0000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.. .+++.+....-+.......++||||++|++|.++........ .....+..++..+|+|+|+.|++|
T Consensus 51 e~~~l~~-----~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiH 125 (331)
T cd05624 51 ERNVLVN-----GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVH 125 (331)
T ss_pred HHHHHHh-----CCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 1111111 122333222222334466789999999999988755422233 344556678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCCcchHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-----DFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~Di~sl~~~l~~ 366 (487)
||+||+|||++.+|.++|+|||++..+......... ...+.+..++++.+.. +..+.++|+||+|+.+++
T Consensus 126 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~e 200 (331)
T cd05624 126 RDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSS-----VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 200 (331)
T ss_pred ccCchHHEEEcCCCCEEEEeccceeeccCCCceeec-----cccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhh
Confidence 999999999999999999999998776543211000 1112233334443322 445778999999999999
Q ss_pred HHHHhccCCCCcCc
Q 011399 367 FFDDALNSSVSELN 380 (487)
Q Consensus 367 ~~~~~~~~~~~~~~ 380 (487)
++++. .|+...+
T Consensus 201 ll~g~--~Pf~~~~ 212 (331)
T cd05624 201 MLYGE--TPFYAES 212 (331)
T ss_pred hhhCC--CCccCCC
Confidence 99854 3444433
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=219.79 Aligned_cols=271 Identities=15% Similarity=0.168 Sum_probs=162.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+...+++.||+|+...... ..+..+++ ...|+|++++++.+.
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~---~~E~~~l~----------~l~h~~iv~~~~~~~----------- 127 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT---LIEAMLLQ----------NVNHPSVIRMKDTLV----------- 127 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcccc---HHHHHHHH----------hCCCCCCcChhheEE-----------
Confidence 789999999999999988899999998654321 11222222 234777777665322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
.....++|||++.| +|.++........+. ...+..++..+|.|+|..||+|
T Consensus 128 --------------------------~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 180 (357)
T PHA03209 128 --------------------------SGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIH 180 (357)
T ss_pred --------------------------eCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 12445799999976 565553332233333 3455578888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHH-HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEA-RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||+||+|||++.++.++|+|||++....... .....++ +..++++.+..+..+.++|+||+|+.+++++..
T Consensus 181 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt--------~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~ 252 (357)
T PHA03209 181 RDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGT--------VETNAPEVLARDKYNSKADIWSAGIVLFEMLAY 252 (357)
T ss_pred CCCCHHHEEECCCCCEEEecCccccccccCccccccccc--------ccccCCeecCCCCCCchhhHHHHHHHHHHHHHc
Confidence 9999999999999999999999987543221 1111222 222333333334457889999999999999862
Q ss_pred hccCCCCcC--c----HHHHHHHHHHHHhh---CCCCCChHH-HHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 371 ALNSSVSEL--N----FKTIVDGLGAVLYQ---YPFNVPAYY-ALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 371 ~~~~~~~~~--~----~~~~~~~l~~~~~~---~~~~~p~~~-~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
.. ..+... . .......+...+.. .+...|... ..+.+.+....+. ...|. . ..+.+ -..
T Consensus 253 ~~-~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~----~~~~~---~~~ 321 (357)
T PHA03209 253 PS-TIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASL--ERQPY-T----RYPCF---QRV 321 (357)
T ss_pred CC-ccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhccc--CCCcc-c----ccHHH---hcc
Confidence 11 111111 1 01111112222211 122222110 1111111110010 01111 0 00111 112
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
..+..+++.+.+||..||++|++..+.+.|+||+
T Consensus 322 ~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~ 355 (357)
T PHA03209 322 NLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA 355 (357)
T ss_pred CCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence 4567888999999999999999999999999996
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=215.51 Aligned_cols=244 Identities=16% Similarity=0.192 Sum_probs=176.4
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHH-----HHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA-----IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~-----~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
++.||+|-|+.|-+|++.-+|+.||||++.+...+. +-.+++.|+-+ .|+|++.+++.+-.
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV----------QHpNiVRLYEViDT---- 88 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV----------QHPNIVRLYEVIDT---- 88 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh----------cCcCeeeeeehhcc----
Confidence 378999999999999999999999999997553322 12222222222 37777776665432
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC--CCHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG--LKVLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~--~~~~~~~~~~i~~~l~~lh 285 (487)
.+..||++|+=+||+|.|++-.+..| ++..+.+..||..++.|+|
T Consensus 89 ---------------------------------QTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH 135 (864)
T KOG4717|consen 89 ---------------------------------QTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH 135 (864)
T ss_pred ---------------------------------cceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh
Confidence 37889999999999999987655544 5667888899999999999
Q ss_pred HCCccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 286 EYGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
...++|||+||+|+.+- +-|-+||.|||++-.+.+..+. ......++|..||.+.. -.|-+|.+||||+|+.|
T Consensus 136 qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL--~TsCGSLAYSAPEILLG----DsYDAPAVDiWSLGVIL 209 (864)
T KOG4717|consen 136 QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL--TTSCGSLAYSAPEILLG----DSYDAPAVDIWSLGVIL 209 (864)
T ss_pred hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchh--hcccchhhccCchhhhc----CccCCcchhhhHHHHHH
Confidence 99999999999999776 5689999999999888776432 22333566666776532 34678999999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
|.++.+ ..|+++-+-..-+.. +....+.+|.. .+.
T Consensus 210 yMLVCG--q~PFqeANDSETLTm----ImDCKYtvPsh---------------------------------------vS~ 244 (864)
T KOG4717|consen 210 YMLVCG--QPPFQEANDSETLTM----IMDCKYTVPSH---------------------------------------VSK 244 (864)
T ss_pred HHHHhC--CCccccccchhhhhh----hhcccccCchh---------------------------------------hhH
Confidence 988873 345554442221111 11222233322 245
Q ss_pred HHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+-|+.+..||..||++|.+..+-..++|.+
T Consensus 245 eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 245 ECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred HHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 677888888999999998888888888874
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.8e-25 Score=224.62 Aligned_cols=281 Identities=15% Similarity=0.167 Sum_probs=169.0
Q ss_pred hcccCCcccccccccEEEEEEEc--cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLK--YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
|..+ +.||+|+||.||+|... .+++.||||....+. ....++++++. ..|++++.+++.+.
T Consensus 94 y~i~--~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--~~~~E~~il~~----------l~h~~iv~~~~~~~--- 156 (392)
T PHA03207 94 YNIL--SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--TPGREIDILKT----------ISHRAIINLIHAYR--- 156 (392)
T ss_pred eEEE--EeecCCCCeEEEEEEEcCCccceeEEEEeccccc--cHHHHHHHHHh----------cCCCCccceeeeEe---
Confidence 4444 77999999999999864 246889999886442 11223333222 23666655544221
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~l 284 (487)
.....+++||++.+ +|.++... ..........+..++..+|.||
T Consensus 157 ----------------------------------~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~L 201 (392)
T PHA03207 157 ----------------------------------WKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEALAYL 201 (392)
T ss_pred ----------------------------------eCCEEEEEehhcCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 12456899999975 55554321 1122334445567888899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
|..||+||||||+|||++.+|.++|+|||++..+......... ....+.+..+++++...+..+.++|+||+|+.+
T Consensus 202 H~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 277 (392)
T PHA03207 202 HGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQC----YGWSGTLETNSPELLALDPYCAKTDIWSAGLVL 277 (392)
T ss_pred HHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccc----cccccccCccCHhHhcCCCCCchhhHHHHHHHH
Confidence 9999999999999999999999999999999776543111000 011122333344444445567889999999999
Q ss_pred HHHHHHhccCCCCcC---cHHHHHHHHHHHHhhCCCCCChHHH-HHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 365 RNFFDDALNSSVSEL---NFKTIVDGLGAVLYQYPFNVPAYYA-LILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~p~~~~-~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
++++.+.. ++... +....+..+...+...+...|.... .+.+.+.. ......|.+.+ .+.+. ..
T Consensus 278 ~el~~g~~--pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~---~~ 345 (392)
T PHA03207 278 FEMSVKNV--TLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQ---YAIVLRPPYTI----PPVIR---KY 345 (392)
T ss_pred HHHHHCCC--CCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHh---hcccccCCccc----cchhh---cc
Confidence 99997543 22221 1122222333333333333332211 11121111 11112222211 11111 11
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
..+.++++.+.+||..||.+|++..+.+.|+||.-.
T Consensus 346 ~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 346 GMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred CcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 346788899999999999999999999999999643
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=210.70 Aligned_cols=271 Identities=18% Similarity=0.200 Sum_probs=164.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChH-----HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE-----EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~-----~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|+.+.+|+.||+|..+.... ..+..++.+++ ...|++++.+.+.+..
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~----------~l~h~~i~~~~~~~~~----- 70 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLK----------ELKHKNIVRLYDVLHS----- 70 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHH----------hcCCCCeeeHHHHhcc-----
Confidence 679999999999999998999999999864321 11222222222 2237777776664431
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (487)
.+..+++|||++| ++.+.........+ ....+..++..++.|+|.
T Consensus 71 --------------------------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~ 117 (284)
T cd07839 71 --------------------------------DKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS 117 (284)
T ss_pred --------------------------------CCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2456799999986 55544322222233 344556788889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|+|+||+||+++.+|.++|+|||++..+...... .........+..||.+. .....+++.|+||+|+.+++
T Consensus 118 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~il~~ 192 (284)
T cd07839 118 HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC-YSAEVVTLWYRPPDVLF----GAKLYSTSIDMWSAGCIFAE 192 (284)
T ss_pred CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC-cCCCccccCCcChHHHh----CCcccCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999998765432110 00011122233444331 11234778999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhh-hhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLAL-YADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~-~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
++++..+ .+...+.......+...+ +.|+... ...+..... ..-|.+. ....+ .......++.
T Consensus 193 l~tg~~p-~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~ 256 (284)
T cd07839 193 LANAGRP-LFPGNDVDDQLKRIFRLL-----GTPTEES-----WPGVSKLPDYKPYPMYP---ATTSL--VNVVPKLNST 256 (284)
T ss_pred HHhcCCC-CcCCCCHHHHHHHHHHHh-----CCCChHH-----hHHhhhcccccccCCCC---Ccchh--hhhcccCCHH
Confidence 9974332 122233332222222211 1111110 000000000 0001111 00001 1223356889
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+++.+.+||..||..|++..+.+.|+||
T Consensus 257 ~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 257 GRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred HHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-23 Score=205.96 Aligned_cols=205 Identities=18% Similarity=0.193 Sum_probs=130.8
Q ss_pred cccccccccEEEEEEEcc----------------CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY----------------SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVAL 197 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~----------------~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~ 197 (487)
+.||+|+||.||+|.+.. ++..||||++++........
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------- 64 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARN-------------------------- 64 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHH--------------------------
Confidence 679999999999998632 34579999998653221110
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc------------
Q 011399 198 IDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ------------ 265 (487)
Q Consensus 198 ~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~------------ 265 (487)
+|.+|...+.++. ++++.-..-+....+..+++|||++|++|.++......
T Consensus 65 ------------~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 127 (304)
T cd05096 65 ------------DFLKEVKILSRLK-----DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVP 127 (304)
T ss_pred ------------HHHHHHHHHhhcC-----CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccc
Confidence 1222333222221 22222111122234567899999999999887543211
Q ss_pred --------CCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcC
Q 011399 266 --------GLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRD 337 (487)
Q Consensus 266 --------~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~ 337 (487)
.......+..++..++.|+|+.|++|+|+||+|||++.++.++|+|||+++.+.........+ .....
T Consensus 128 ~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~----~~~~~ 203 (304)
T cd05096 128 PAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQG----RAVLP 203 (304)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecC----cCCCC
Confidence 011233456788899999999999999999999999999999999999998664322110111 01112
Q ss_pred HHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 011399 338 YEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (487)
Q Consensus 338 ~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (487)
...++++....+..++++|+||+|+.+++++......++...+....+
T Consensus 204 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~ 251 (304)
T cd05096 204 IRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVI 251 (304)
T ss_pred ccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHH
Confidence 233444555556678899999999999999875444565555544433
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-24 Score=226.85 Aligned_cols=210 Identities=14% Similarity=0.116 Sum_probs=128.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+...+|+.||||++....... .+.. .+...+..+....|++++.+.+.+...
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~--~~~~---~~~~Ei~~l~~~~h~~iv~~~~~~~~~--------- 103 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE--ADKN---RAQAEVCCLLNCDFFSIVKCHEDFAKK--------- 103 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH--HHHH---HHHHHHHHHhcCCCCcEEEeecceecc---------
Confidence 67999999999999998899999999986432110 0000 000000011111233332222111000
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCC--HHHHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLK--VLDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~--~~~~~~~~i~~~l~~lh~~g 288 (487)
+.. ........++||||++|++|.+...... ..+. ....+..++..+|.|+|+.|
T Consensus 104 -------------~~~-------~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~ 163 (496)
T PTZ00283 104 -------------DPR-------NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH 163 (496)
T ss_pred -------------ccc-------CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 000 0000112469999999999988754321 1223 33445678888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++||||||+|||++.+|.++|+|||+++.+......... ....+.+.+++++.+..+..+.+.|+||+|+.+++++
T Consensus 164 IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~----~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLl 239 (496)
T PTZ00283 164 MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVG----RTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL 239 (496)
T ss_pred EecCCCCHHHEEEeCCCCEEEEecccCeecccccccccc----ccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999876432111100 0112233344555555555688899999999999999
Q ss_pred HHhccCCCCcCcHHH
Q 011399 369 DDALNSSVSELNFKT 383 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~ 383 (487)
++. .|+...+...
T Consensus 240 tG~--~Pf~~~~~~~ 252 (496)
T PTZ00283 240 TLK--RPFDGENMEE 252 (496)
T ss_pred HCC--CCCCCCCHHH
Confidence 843 4555544443
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-24 Score=228.39 Aligned_cols=274 Identities=15% Similarity=0.132 Sum_probs=150.4
Q ss_pred cccccccccEEEEEEEccC----CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYS----GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~----g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|++..+ |..||||.......... .....+... .+.
T Consensus 138 ~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~----~~~e~l~~~-------~~~----------------- 189 (566)
T PLN03225 138 KKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEI----WMNERVRRA-------CPN----------------- 189 (566)
T ss_pred EEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHH----HHHHHHHhh-------chh-----------------
Confidence 7899999999999999878 89999998764321110 000000000 000
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC---------------------C
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL---------------------K 268 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~---------------------~ 268 (487)
++..+...+... .. .......+|||||+.+++|.++........ .
T Consensus 190 -------~~~~~~~~~~~~------~~-~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~ 255 (566)
T PLN03225 190 -------SCADFVYGFLEP------VS-SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENK 255 (566)
T ss_pred -------hHHHHHHhhhcc------cc-cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHH
Confidence 011111111000 00 112345689999999999987643221110 0
Q ss_pred HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHH------
Q 011399 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAM------ 341 (487)
Q Consensus 269 ~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~------ 341 (487)
....+..++..+|.|+|+.||+||||||+|||++. ++.+||+|||+++.+................+..||..
T Consensus 256 ~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~ 335 (566)
T PLN03225 256 IIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQT 335 (566)
T ss_pred HHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCC
Confidence 12235677888999999999999999999999985 58999999999986543211000000111112223321
Q ss_pred ------------HHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHH
Q 011399 342 ------------ARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRS 409 (487)
Q Consensus 342 ------------~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~ 409 (487)
.+.++..+ .+.++|+||+|+.+++++.+.+... .+ ...+...+.......+.. +
T Consensus 336 ~~~~~~~~~~~~sp~l~~~~-~~~k~DVwSlGviL~el~~~~~~~~---~~----~~~~~~~l~~~~~~~~~~-----~- 401 (566)
T PLN03225 336 PSAPSAPVATALSPVLWQLN-LPDRFDIYSAGLIFLQMAFPNLRSD---SN----LIQFNRQLKRNDYDLVAW-----R- 401 (566)
T ss_pred CCCccccccccccchhcccc-CCCCcccHHHHHHHHHHHhCcCCCc---hH----HHHHHHHHHhcCCcHHHH-----H-
Confidence 01111122 2345699999999999986432211 11 111222222111111111 0
Q ss_pred HHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 410 LTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 410 l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
....+.... ..... -.+.........+.+.+||.+||++|++..+.+.|+||.-
T Consensus 402 --------~~~~~~~~~--~~~~~--~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 402 --------KLVEPRASP--DLRRG--FEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDR 455 (566)
T ss_pred --------Hhhccccch--hhhhh--hhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCC
Confidence 001111000 00000 0112233456778999999999999999999999999954
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-24 Score=225.75 Aligned_cols=273 Identities=16% Similarity=0.106 Sum_probs=159.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||+|+||.||+|++..+++.||||..... ....++++++. +.|+|++.+++.
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~---~~~~E~~iL~~----------L~HpnIv~l~~~------------- 228 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA---SSVHEARLLRR----------LSHPAVLALLDV------------- 228 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc---CHHHHHHHHHH----------CCCCCCCcEEEE-------------
Confidence 6799999999999999988999999964321 11122222221 124444443321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
.......++|||++.| +|.+........++. ...+..++..+|.|+|+.||+|
T Consensus 229 ------------------------~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH 283 (461)
T PHA03211 229 ------------------------RVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIH 283 (461)
T ss_pred ------------------------EEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 1223556899999965 565543322222333 3445677888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|||||+|||++.++.++|+|||+++.+........ .+...+..+..|| .+.-+..+.++|+||+|+.+++++..
T Consensus 284 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE-----~~~~~~~~~~sDvwSlGviL~El~~g 358 (461)
T PHA03211 284 RDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPE-----VLAGDPYTPSVDIWSAGLVIFEAAVH 358 (461)
T ss_pred CcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHH-----HHcCCCCCchHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999986643211100 0111122333344 33344457889999999999999863
Q ss_pred h---ccCCCC--cCcHHHHHHHHHHHHhhCCCCCCh----HHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 371 A---LNSSVS--ELNFKTIVDGLGAVLYQYPFNVPA----YYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 371 ~---~~~~~~--~~~~~~~~~~l~~~~~~~~~~~p~----~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
. +..... ...+...+..+...........|+ .+....+.. ......|.+.. +...+. ..
T Consensus 359 ~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~-----~~~~~~--~~ 426 (461)
T PHA03211 359 TASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHR-----AARNRRPAYTR-----PAWTRY--YK 426 (461)
T ss_pred CCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhh-----hhcccCCccCC-----cchhhh--cc
Confidence 2 111110 011111111221111111111221 111111111 01111121111 101111 13
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.++..++.+..||..||++|++..+.+.|+||+
T Consensus 427 ~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~ 459 (461)
T PHA03211 427 LDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ 459 (461)
T ss_pred ccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence 567899999999999999999999999999996
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-24 Score=206.96 Aligned_cols=255 Identities=18% Similarity=0.189 Sum_probs=157.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.||+|.++....... . ..+....+.+....|++++++.+.+..
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~---~---~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESK---F---NQIIMELDILHKAVSPYIVDFYGAFFI---------- 70 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHH---H---HHHHHHHHHHHhcCCCcHHhhhhheec----------
Confidence 679999999999999988999999998864322110 0 011111111122346777776664321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh--cCCC--HHHHHHHHHHHHHHHHHH-CC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLK--VLDLVNTGIQCSLRQLLE-YG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~--~~~~~~~~i~~~l~~lh~-~g 288 (487)
.+..++||||++|++|..+..... ...+ ....+..++..++.|+|+ .|
T Consensus 71 ---------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~ 123 (286)
T cd06622 71 ---------------------------EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123 (286)
T ss_pred ---------------------------CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 145679999999999977644321 1233 334555778889999996 69
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcchHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY-ALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~Di~sl~~~l~~~ 367 (487)
++|+||||+||+++.++.++|+|||++..+.........+. ..+..|+.+..... .....+...|+||+|+.++++
T Consensus 124 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~---~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l 200 (286)
T cd06622 124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGC---QSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEM 200 (286)
T ss_pred EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCc---cCccCcchhcCCCCCccCCCCcccchHhHHHHHHHH
Confidence 99999999999999999999999999876643221111111 11222332210000 001135678999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+++.. |+...+.......+....... .|. +....+++.+
T Consensus 201 ~~g~~--pf~~~~~~~~~~~~~~~~~~~-------------------------~~~--------------~~~~~~~~~~ 239 (286)
T cd06622 201 ALGRY--PYPPETYANIFAQLSAIVDGD-------------------------PPT--------------LPSGYSDDAQ 239 (286)
T ss_pred HhCCC--CCCCcchhhHHHHHHHHhhcC-------------------------CCC--------------CCcccCHHHH
Confidence 87433 332222111111111111000 011 0112467778
Q ss_pred HHHHHHHhhcCcccccccchhhcccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+.+||..+|..|.+..+-+.|+||..
T Consensus 240 ~li~~~l~~~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 240 DFVAKCLNKIPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred HHHHHHcccCcccCCCHHHHhcChhhhh
Confidence 8888999999999999888888988843
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=202.72 Aligned_cols=252 Identities=20% Similarity=0.219 Sum_probs=161.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.++.+|+.||+|.+.......... ..++. ++.+....|+++..+.+.+.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~--~~~~e----~~~l~~~~~~~i~~~~~~~~----------- 69 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQK--QILRE----LDILHKCNSPYIVGFYGAFY----------- 69 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHH--HHHHH----HHHHHHCCCCchhhhheeee-----------
Confidence 67999999999999999889999999987553221111 11111 11111223555555444221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHH-CCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLE-YGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~-~giv 290 (487)
..+..+++|||++|++|.++........+. ...+..++..++.++|+ .|++
T Consensus 70 --------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~ 123 (265)
T cd06605 70 --------------------------NNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKII 123 (265)
T ss_pred --------------------------cCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCee
Confidence 125568999999999998875433223333 33455677889999999 9999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||+||+++.+|.++|+|||.+..+....... .......++++.......+.+.|+||+|+.+++++++
T Consensus 124 H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~--------~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g 195 (265)
T cd06605 124 HRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT--------FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATG 195 (265)
T ss_pred cCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc--------ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999999987765432221 1222333344444344557789999999999999974
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
.. ++...+- .+.......+.. .....|... ....++.+++.+
T Consensus 196 ~~--p~~~~~~-----------------~~~~~~~~~~~~------~~~~~~~~~-------------~~~~~~~~~~li 237 (265)
T cd06605 196 RF--PYPPEND-----------------PPDGIFELLQYI------VNEPPPRLP-------------SGKFSPDFQDFV 237 (265)
T ss_pred CC--CCCcccc-----------------ccccHHHHHHHH------hcCCCCCCC-------------hhhcCHHHHHHH
Confidence 33 2221110 000000011111 000011100 001467788999
Q ss_pred HHHHhhcCcccccccchhhccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+||..||..|++..+-+.|+||.
T Consensus 238 ~~~l~~~p~~Rpt~~~ll~~~~~~ 261 (265)
T cd06605 238 NLCLIKDPRERPSYKELLEHPFIK 261 (265)
T ss_pred HHHcCCCchhCcCHHHHhhCchhh
Confidence 999999999999999999999994
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=206.85 Aligned_cols=261 Identities=19% Similarity=0.158 Sum_probs=166.5
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
.+.+..+ ..||+|++|.||++....+|..||||+......... ....+++ ..+....|++++.+.+.+..
T Consensus 21 ~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~---~~~~~e~----~~l~~l~h~~ii~~~~~~~~- 90 (292)
T cd06658 21 REYLDSF--IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEV----VIMRDYHHENVVDMYNSYLV- 90 (292)
T ss_pred HHHHhhh--hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHH---HHHHHHH----HHHHhCCCCcHHHHHHheec-
Confidence 3444444 569999999999999988899999998854322111 0111111 11223347777776664321
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 284 (487)
....++||||++|++|.++........+....+..++..++.++
T Consensus 91 ------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~L 134 (292)
T cd06658 91 ------------------------------------GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYL 134 (292)
T ss_pred ------------------------------------CCeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 24558999999999998874333333344455567788899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
|+.|++|+|+||.||+++.++.++|+|||++..+....... .... +....++++.....-.+.+.|+||+|+.+
T Consensus 135 H~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~-~~~~-----~~~~y~aPE~~~~~~~~~~~Dv~slGvil 208 (292)
T cd06658 135 HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR-KSLV-----GTPYWMAPEVISRLPYGTEVDIWSLGIMV 208 (292)
T ss_pred HHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC-ceee-----cCccccCHHHHccCCCCchhhHHHHHHHH
Confidence 99999999999999999999999999999987653321110 0001 11222333333334457789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++++.+.. ++...+....+..+ .....+.... ....++
T Consensus 209 ~el~~g~~--p~~~~~~~~~~~~~----------------------------~~~~~~~~~~------------~~~~~~ 246 (292)
T cd06658 209 IEMIDGEP--PYFNEPPLQAMRRI----------------------------RDNLPPRVKD------------SHKVSS 246 (292)
T ss_pred HHHHhCCC--CCCCCCHHHHHHHH----------------------------HhcCCCcccc------------ccccCH
Confidence 99987432 32221111110000 0011111110 012456
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
..++.+.+|+..||..|++..+.+.|+||....-|
T Consensus 247 ~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 247 VLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred HHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 77788899999999999999999999999765543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-24 Score=212.48 Aligned_cols=277 Identities=17% Similarity=0.189 Sum_probs=163.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|+++.+++.||+|..+......... ...+++ ..+....|+|++.+.+.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~--~~~~E~----~~l~~l~h~nI~~~~~~------------- 72 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPC--TAIREV----SLLKDLKHANIVTLHDI------------- 72 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchh--HHHHHH----HHHHhcCCCCcceEEEE-------------
Confidence 77999999999999998889999999986432111000 000000 00111123333332221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
.......++||||++| +|.+.........+ ....+..++..++.++|+.|++|
T Consensus 73 ------------------------~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H 127 (301)
T cd07873 73 ------------------------IHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLH 127 (301)
T ss_pred ------------------------EecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 1223556899999986 66555332222233 33445577888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||+||+++.++.++|+|||++......... ......+..+..|+.+. .....+.+.|+||+|+.+++++++.
T Consensus 128 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~~PE~~~----~~~~~~~~~Dv~slG~~l~el~tg~ 202 (301)
T cd07873 128 RDLKPQNLLINERGELKLADFGLARAKSIPTKT-YSNEVVTLWYRPPDILL----GSTDYSTQIDMWGVGCIFYEMSTGR 202 (301)
T ss_pred CCCCHHHEEECCCCcEEECcCcchhccCCCCCc-ccccceeecccCcHHHh----CCCCCccHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998764322110 01111122333444321 1123466789999999999999853
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+.......+...+ ....+..+. .+...+.....-.|.+. .+.. .......++.+++.+.
T Consensus 203 --~~f~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~li~ 267 (301)
T cd07873 203 --PLFPGSTVEEQLHFIFRIL---GTPTEETWP----GILSNEEFKSYNYPKYR-----ADCL-HNHAPRLDSDGAELLS 267 (301)
T ss_pred --CCCCCCCHHHHHHHHHHHc---CCCChhhch----hhhccccccccccCccc-----cccH-HhhcCCCCHHHHHHHH
Confidence 3444444433333332221 111111111 11111111111111111 0111 1223356789999999
Q ss_pred HHHhhcCcccccccchhhccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+||..||++|++..+.+.|+||.
T Consensus 268 ~ml~~dp~~R~t~~eil~h~~f~ 290 (301)
T cd07873 268 KLLQFEGRKRISAEEAMKHPYFH 290 (301)
T ss_pred HHhcCCcccCcCHHHHhcCcccc
Confidence 99999999999999999999994
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.4e-24 Score=208.53 Aligned_cols=252 Identities=15% Similarity=0.106 Sum_probs=155.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+|+.||+|+..+....... . +..+..
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------~------~~~~~~ 49 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRK------------------------------G------ESMALN 49 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhh------------------------------H------HHHHHH
Confidence 6799999999999999889999999998643211000 0 001222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++. +...+.+...+ ...+..+++|||++|++|.+...... .+.+. ...+..++..++.|+|+.|++
T Consensus 50 E~~il~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ii 124 (285)
T cd05632 50 EKQILEKVN----SQFVVNLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV 124 (285)
T ss_pred HHHHHHHcC----CcCceeEEEEE-ecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 333333321 11112222222 23456789999999999987644322 22333 344557888899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||+||+++.++.++|+|||++..+...... ........+..|| ....+..+.+.|+||+|+.+++++++
T Consensus 125 H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~g~~~~~aPE-----~~~~~~~~~~~Di~slG~~l~~l~~g 197 (285)
T cd05632 125 YRDLKPENILLDDYGHIRISDLGLAVKIPEGESI--RGRVGTVGYMAPE-----VLNNQRYTLSPDYWGLGCLIYEMIEG 197 (285)
T ss_pred ecCCCHHHEEECCCCCEEEecCCcceecCCCCcc--cCCCCCcCccChH-----HhcCCCCCcccchHHHHHHHHHHHhC
Confidence 9999999999999999999999998765432110 1111122233344 33344557789999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+.......+..... .+... .....++.+.+.+
T Consensus 198 ~--~P~~~~~~~~~~~~~~~~~~---------------------------~~~~~------------~~~~~~~~~~~li 236 (285)
T cd05632 198 Q--SPFRGRKEKVKREEVDRRVL---------------------------ETEEV------------YSAKFSEEAKSIC 236 (285)
T ss_pred C--CCCCCCCHHHHHHHHHHhhh---------------------------ccccc------------cCccCCHHHHHHH
Confidence 3 34433322111111110000 00000 0123456677888
Q ss_pred HHHHhhcCccccc-----ccchhhccccc
Q 011399 451 VELLFKDGRFRHV-----LYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~-----~~~~~~~~~~~ 474 (487)
..||..||..|++ .-+.+.|+||.
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~ 265 (285)
T cd05632 237 KMLLTKDPKQRLGCQEEGAGEVKRHPFFR 265 (285)
T ss_pred HHHccCCHhHcCCCcccChHHHHcChhhh
Confidence 8889999999998 45667788874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-24 Score=210.51 Aligned_cols=253 Identities=15% Similarity=0.103 Sum_probs=152.6
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||.||+|....+|+.||||+.++.....-..+. .+..|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~------------------------------------~~~~~ 44 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET------------------------------------LALNE 44 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHH------------------------------------HHHHH
Confidence 389999999999999888999999998754211000000 00001
Q ss_pred HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
. .+.++... .+++.+....-+.......++||||++|++|.+...... ........+..++..++.|+|+.|++|+|
T Consensus 45 ~-~~~~~~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~d 122 (279)
T cd05633 45 R-IMLSLVST-GDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRD 122 (279)
T ss_pred H-HHHHHHhh-CCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCC
Confidence 1 01111111 122333222112223456789999999999987643221 22333445567788899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHHHHhc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
+||+||+++.++.++|+|||++........... .+....++++....+ ..+.+.|+||+|+.+++++++..
T Consensus 123 ikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 194 (279)
T cd05633 123 LKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHS 194 (279)
T ss_pred CCHHHEEECCCCCEEEccCCcceeccccCccCc--------CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCC
Confidence 999999999999999999999876543221111 122223333333222 35778999999999999997432
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
++....... ...+.... ...++. +....++.+++.+.+
T Consensus 195 --pf~~~~~~~-~~~~~~~~-------------------------~~~~~~--------------~~~~~~~~~~~li~~ 232 (279)
T cd05633 195 --PFRQHKTKD-KHEIDRMT-------------------------LTVNVE--------------LPDSFSPELKSLLEG 232 (279)
T ss_pred --CcCCCCCcC-HHHHHHHh-------------------------hcCCcC--------------CccccCHHHHHHHHH
Confidence 322211000 00000000 000111 111346788889999
Q ss_pred HHhhcCccccc-----ccchhhcccccc
Q 011399 453 LLFKDGRFRHV-----LYSPFTINLVDF 475 (487)
Q Consensus 453 ~L~~d~~~r~~-----~~~~~~~~~~~~ 475 (487)
||..||.+|++ ..+...|+||.-
T Consensus 233 ~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 233 LLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 99999999994 667778888843
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-24 Score=226.12 Aligned_cols=202 Identities=14% Similarity=0.122 Sum_probs=130.3
Q ss_pred cccccccccEEEEEEEccC-CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYS-GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~-g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||.|++|.||+|....+ ++.||+|.......... .. +.
T Consensus 73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~----~~-----------------------------------~~ 113 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQA----AY-----------------------------------AR 113 (478)
T ss_pred EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHH----HH-----------------------------------HH
Confidence 6799999999999998766 78899997643321110 00 11
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH---hcCCC--HHHHHHHHHHHHHHHHHHC
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLK--VLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~--~~~~~~~~i~~~l~~lh~~ 287 (487)
.|+..+..+ +++.+.-..-+....+..+|||||++|++|.+..... ...++ ....+..++..+|.|+|+.
T Consensus 114 ~E~~~l~~l-----~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~ 188 (478)
T PTZ00267 114 SELHCLAAC-----DHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR 188 (478)
T ss_pred HHHHHHHhC-----CCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 122211111 1222211111223346679999999999998764321 12233 3344567888999999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
||+||||||+|||++.+|.++|+|||++..+......... ....+.+..++++.+..+..+.++|+||+|+.++++
T Consensus 189 ~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 264 (478)
T PTZ00267 189 KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVA----SSFCGTPYYLAPELWERKRYSKKADMWSLGVILYEL 264 (478)
T ss_pred CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccc----cccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHH
Confidence 9999999999999999999999999999876543211110 111233444555555555568889999999999999
Q ss_pred HHHhccCCCCcCcHHHHH
Q 011399 368 FDDALNSSVSELNFKTIV 385 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~ 385 (487)
+++. .|+...+...++
T Consensus 265 ~tg~--~Pf~~~~~~~~~ 280 (478)
T PTZ00267 265 LTLH--RPFKGPSQREIM 280 (478)
T ss_pred HhCC--CCCCCCCHHHHH
Confidence 9843 355444444333
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-24 Score=209.77 Aligned_cols=283 Identities=18% Similarity=0.198 Sum_probs=167.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHH--HHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA--IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~--~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|++|+||+|..+.+|+.||||..+...... ...+.....++ +.+....|++++.+.+.+.
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~----~~l~~~~h~~i~~~~~~~~--------- 72 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREI----KLLQELKHPNIIGLLDVFG--------- 72 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHH----HHHhhcCCCCChhhhheee---------
Confidence 56999999999999998889999999987543220 00000011111 1111223555555544321
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
.....++||||+ +++|.++........+. ...+..++..++.++|.+|+
T Consensus 73 ----------------------------~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 123 (298)
T cd07841 73 ----------------------------HKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWI 123 (298)
T ss_pred ----------------------------cCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 124568999999 88888774432212333 33455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|++|+||+++.+|.++|+|||++..+...... .........+..||.+ ......+...|+||+|+.++++++
T Consensus 124 ~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~----~~~~~~~~~~Dv~slG~il~e~~~ 198 (298)
T cd07841 124 LHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK-MTHQVVTRWYRAPELL----FGARHYGVGVDMWSVGCIFAELLL 198 (298)
T ss_pred eecCCChhhEEEcCCCCEEEccceeeeeccCCCcc-ccccccceeeeCHHHH----hCCCCCCcHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999876432110 0000111223334432 122344678999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+-......+ ........+..+.. . .. .+.+.......+.-...+....+..+++.
T Consensus 199 g~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (298)
T cd07841 199 RV--PFLPGDSDIDQLGKI---FEALGTPTEENWPG----V---TS-----LPDYVEFKPFPPTPLKQIFPAASDDALDL 261 (298)
T ss_pred CC--ccccCCccHHHHHHH---HHHcCCCchhhhhh----c---cc-----ccccccccccCCcchhhhcccccHHHHHH
Confidence 52 222222211112222 21111111111100 0 00 00110000000011122334557889999
Q ss_pred HHHHHhhcCcccccccchhhccccccccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDFEFVVC 480 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~ 480 (487)
+.+||..||+.|++..+.+.|+||.-.+.+-
T Consensus 262 i~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~ 292 (298)
T cd07841 262 LQRLLTLNPNKRITARQALEHPYFSNDPAPT 292 (298)
T ss_pred HHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence 9999999999999999999999997766553
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.3e-24 Score=214.29 Aligned_cols=293 Identities=15% Similarity=0.189 Sum_probs=165.8
Q ss_pred hhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 127 ~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
.|+.. +.||+|++|.||+|++..+|+.||||+........-.. ....+.+ ..+....|++++++++.+...
T Consensus 17 ~y~~~--~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~E~----~~l~~l~h~~iv~~~~~~~~~-- 87 (353)
T cd07850 17 RYQNL--KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHA-KRAYREL----VLMKLVNHKNIIGLLNVFTPQ-- 87 (353)
T ss_pred ceEEE--EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHH-HHHHHHH----HHHHhcCCCCCcceeeeeccC--
Confidence 35554 78999999999999998899999999875321110000 0011111 111112355555544322100
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
...+.....++||||++| ++.+.... .........+..++..++.++|.
T Consensus 88 -----------------------------~~~~~~~~~~lv~e~~~~-~l~~~~~~-~l~~~~~~~~~~ql~~aL~~LH~ 136 (353)
T cd07850 88 -----------------------------KSLEEFQDVYLVMELMDA-NLCQVIQM-DLDHERMSYLLYQMLCGIKHLHS 136 (353)
T ss_pred -----------------------------CCccccCcEEEEEeccCC-CHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHh
Confidence 000011345899999976 55544222 13333444566788899999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|+|+||+||+++.+|.++|+|||++......... ........+..||. ....-.+.++|+||+|+.+++
T Consensus 137 ~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~y~aPE~-----~~~~~~~~~~DvwslG~~l~~ 209 (353)
T cd07850 137 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRYYRAPEV-----ILGMGYKENVDIWSVGCIMGE 209 (353)
T ss_pred CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCC--CCCcccccccCHHH-----HhCCCCCCchhhHhHHHHHHH
Confidence 99999999999999999999999999999876543210 00011122333443 333445788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCC--hHHhHhHHHH-----HHhc
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFK--VLAASYPYFA-----KRLL 439 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~--~~~~~~p~~~-----~~l~ 439 (487)
++.+.. ++...+.......+ ...... .++.+......... .... -.|... ......+-.. ....
T Consensus 210 l~~g~~--pf~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (353)
T cd07850 210 MIRGTV--LFPGTDHIDQWNKI---IEQLGT-PSDEFMSRLQPTVR-NYVE--NRPKYAGYSFEELFPDVLFPPDSESHN 280 (353)
T ss_pred HHHCCC--CCCCCCHHHHHHHH---HHhcCC-CCHHHHHHhhhhhh-HHhh--cCCCCCCcchhhhCcccccCccccccc
Confidence 997543 34333322222222 222121 12233222221110 0000 011110 0000000000 0001
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
...++..++.+.+||..||..|++..+.+.|+||+.
T Consensus 281 ~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 281 KLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred ccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 123557899999999999999999999999998863
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.3e-24 Score=206.56 Aligned_cols=196 Identities=15% Similarity=0.142 Sum_probs=133.0
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+.|+.+ +.||+|++|.||+|.+..+|+.||+|+.......... ..+...+..+....|++++.+.+.+..
T Consensus 2 ~~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (277)
T cd06642 2 PEELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEI------EDIQQEITVLSQCDSPYITRYYGSYLK 73 (277)
T ss_pred hHHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHH------HHHHHHHHHHHcCCCCccHhhhccccc
Confidence 34566666 6799999999999999878999999998744322111 111112222223347777776664321
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (487)
.+..++||||++|++|.+..............+..++..++.+
T Consensus 74 -------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~ 116 (277)
T cd06642 74 -------------------------------------GTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDY 116 (277)
T ss_pred -------------------------------------CCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 2456899999999999876432222223334455778889999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+|..|++|+|+||+||+++.+|.++++|||++..+....... ....+....++++....+..+.+.|+||+|+.
T Consensus 117 lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 190 (277)
T cd06642 117 LHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIKQSAYDFKADIWSLGIT 190 (277)
T ss_pred HhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhh------hcccCcccccCHHHhCcCCCchhhhHHHHHHH
Confidence 999999999999999999999999999999998775432110 00111222233333334445778999999999
Q ss_pred HHHHHHH
Q 011399 364 LRNFFDD 370 (487)
Q Consensus 364 l~~~~~~ 370 (487)
+++++++
T Consensus 191 l~el~tg 197 (277)
T cd06642 191 AIELAKG 197 (277)
T ss_pred HHHHHhC
Confidence 9999874
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=192.51 Aligned_cols=282 Identities=19% Similarity=0.204 Sum_probs=175.8
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.+|||-|.||.||..++..+|+.||.|... ++.+.+..-.. +.+.+..+..++|.|+...+|.++-. .+||-
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~p-nvfq~L~s~kr----vFre~kmLcfFkHdNVLSaLDILQPp---h~dfF 129 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMP-NVFQNLASCKR----VFREIKMLSSFRHDNVLSLLDILQPA---NPSFF 129 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcc-hHHHHHHHHHH----HHHHHHHHHhhccccHHHHHHhcCCC---CchHH
Confidence 489999999999999999999999999873 33333333323 33333333345577777777654321 22333
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
.|. |.+.|.+.. +|..++. -....-+..++...+|..+|+|+|+.||.|
T Consensus 130 qEi-----------------------------YV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILH 179 (449)
T KOG0664|consen 130 QEL-----------------------------YVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILH 179 (449)
T ss_pred HHH-----------------------------HHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhh
Confidence 332 234444432 3332211 112234556677789999999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|||||||+|++.+..+||+|||+++.-..+.+..+..-+.+-.++.||.+... ..++..+|+||.||.+.|++.+.
T Consensus 180 RDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGa----RhYs~AvDiWSVGCIFaELLgRr 255 (449)
T KOG0664|consen 180 RDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGA----RRYTGAVDIWSVGCIFAELLQRK 255 (449)
T ss_pred ccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcc----hhhcCccceehhhHHHHHHHhhh
Confidence 99999999999999999999999999988888888888888888988876321 12377899999999999998642
Q ss_pred cc-CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhh------hhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 372 LN-SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLA------LYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 372 ~~-~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~------~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
.- ...+.+..-+++.++ .+.|.- ..+|.. -||-. ..-.|++.++..... ....+-
T Consensus 256 ILFQAq~PiqQL~lItdL--------LGTPs~--EaMr~A--CEGAk~H~LR~~~k~Ps~~vLYtlsS------~~~~~h 317 (449)
T KOG0664|consen 256 ILFQAAGPIEQLQMIIDL--------LGTPSQ--EAMKYA--CEGAKNHVLRAGLRAPDTQRLYKIAS------PDDKNH 317 (449)
T ss_pred hhhhccChHHHHHHHHHH--------hCCCcH--HHHHHH--hhhhHHHhhccCCCCCCccceeeecC------Ccccch
Confidence 21 111111111111111 122321 111211 23321 111244333211000 012344
Q ss_pred HHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+....+.++|.-||++|.+...++.|.+.+
T Consensus 318 eav~~~~~~l~~d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 318 EAVDLLQKLLHFDPDKRISVEEALQHRYLE 347 (449)
T ss_pred HHHHHHHHHhCCCCcccccHhhhccccccc
Confidence 566677788888999999988888887763
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-23 Score=199.60 Aligned_cols=250 Identities=17% Similarity=0.088 Sum_probs=162.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||.|++|.||+|.+..+|+.||+|+....... +....+.+...++.+....|+|++.+.+.+..
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 71 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCV----EKGSVRNVLNERRILQELNHPFLVNLWYSFQD---------- 71 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhc----chhHHHHHHHHHHHHHhCCCCChHHHHHhhcC----------
Confidence 6899999999999999888999999998643211 11112222222233334457888777765421
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
....++||||+.|++|.+..... .........+..++..++.++|..|++|+
T Consensus 72 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~ 124 (258)
T cd05578 72 ---------------------------EENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHR 124 (258)
T ss_pred ---------------------------CCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 24568999999999998775433 22223334455778889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|++|.||+++.+|.++|+|||.+......... ....+....++++.......+.+.|+||+|+.+++++++.
T Consensus 125 dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~- 196 (258)
T cd05578 125 DIKPDNILLDEQGHVHITDFNIATKVTPDTLT-------TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGK- 196 (258)
T ss_pred CCCHHHeEEcCCCCEEEeecccccccCCCccc-------cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCC-
Confidence 99999999999999999999998876543210 0111222333344433344578899999999999999743
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.++...+.. ....+..... ...+. .....++...+.+.+
T Consensus 197 -~p~~~~~~~-~~~~~~~~~~-------------------------~~~~~--------------~~~~~~~~~~~~i~~ 235 (258)
T cd05578 197 -RPYRGHSRT-IRDQIRAKQE-------------------------TADVL--------------YPATWSTEAIDAINK 235 (258)
T ss_pred -CCCCCCCcc-HHHHHHHHhc-------------------------ccccc--------------CcccCcHHHHHHHHH
Confidence 233322210 0000000000 00000 001124677889999
Q ss_pred HHhhcCcccccc--cchhhcccc
Q 011399 453 LLFKDGRFRHVL--YSPFTINLV 473 (487)
Q Consensus 453 ~L~~d~~~r~~~--~~~~~~~~~ 473 (487)
||..||..|.+. .+-..|+||
T Consensus 236 ~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 236 LLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HccCChhHcCCccHHHHhcCCCC
Confidence 999999999999 788888887
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=201.88 Aligned_cols=248 Identities=17% Similarity=0.140 Sum_probs=154.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|++|.||+|....+|+.||||+.+......... .+ ++..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~----~~--------------------------------~~~~ 45 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQ----VT--------------------------------NVKA 45 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHH----HH--------------------------------HHHH
Confidence 57999999999999998889999999986431110000 00 0000
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+ ... .+++. +++++ ....+..+++|||++|++|.++.... .........+..++..++.++|+.|++
T Consensus 46 e~~~~---~~~-~~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~ 119 (260)
T cd05611 46 ERAIM---MIQ-GESPY--VAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGII 119 (260)
T ss_pred HHHHH---hhc-CCCCC--eeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 10000 000 11222 22222 12235578999999999998875432 123334455667888899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|++|.||+++.++.++|+|||++....... .. .+.+..++++...-+..+.+.|+||+|+.+++++++
T Consensus 120 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~--------~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g 189 (260)
T cd05611 120 HRDIKPENLLIDQTGHLKLTDFGLSRNGLENK--KF--------VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFG 189 (260)
T ss_pred cCCCCHHHeEECCCCcEEEeecccceeccccc--cC--------CCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHC
Confidence 99999999999999999999999887643311 01 111222233333333457789999999999999974
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+.......+.. . .+.+.. ......++.+++.+
T Consensus 190 ~--~p~~~~~~~~~~~~~~~---------------------------~--~~~~~~----------~~~~~~~~~~~~~i 228 (260)
T cd05611 190 Y--PPFHAETPDAVFDNILS---------------------------R--RINWPE----------EVKEFCSPEAVDLI 228 (260)
T ss_pred C--CCCCCCCHHHHHHHHHh---------------------------c--ccCCCC----------cccccCCHHHHHHH
Confidence 3 34433332222211100 0 000000 00113467889999
Q ss_pred HHHHhhcCcccccc---cchhhccccc
Q 011399 451 VELLFKDGRFRHVL---YSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~---~~~~~~~~~~ 474 (487)
.+||..||..|++. .+.+.|+||.
T Consensus 229 ~~~l~~~p~~R~~~~~~~~~l~~~~~~ 255 (260)
T cd05611 229 NRLLCMDPAKRLGANGYQEIKSHPFFK 255 (260)
T ss_pred HHHccCCHHHccCCCcHHHHHcChHhh
Confidence 99999999999966 5888999983
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=207.01 Aligned_cols=255 Identities=20% Similarity=0.189 Sum_probs=160.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||+|++|+||+|....+|+.||||+........ .....+.+ ..+....|++++.+.+.+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~---~~~~~~e~----~~l~~l~h~~iv~~~~~~------------ 86 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQR---RELLFNEV----VIMRDYQHENVVEMYNSY------------ 86 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhH---HHHHHHHH----HHHHhcCCcchhheeeEE------------
Confidence 56999999999999998899999999875322111 00011111 111112244444433321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
......+++|||++|++|.++......+.+....+..++..++.++|+.|++|+|
T Consensus 87 -------------------------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~d 141 (292)
T cd06657 87 -------------------------LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRD 141 (292)
T ss_pred -------------------------EeCCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 1125568999999999998764333333334445567788899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
+||+||+++.+|.++|+|||++..+....... .. ..+.+..++++....+..+++.|+||+|+.+++++++.
T Consensus 142 l~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~-~~-----~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~-- 213 (292)
T cd06657 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KS-----LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE-- 213 (292)
T ss_pred CCHHHEEECCCCCEEEcccccceecccccccc-cc-----cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCC--
Confidence 99999999999999999999987664332110 00 01112223333333344577899999999999998743
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
.++...+.......+ ...+.+.+. .....++.+++.+.+|
T Consensus 214 ~p~~~~~~~~~~~~~----------------------------~~~~~~~~~------------~~~~~~~~l~~li~~~ 253 (292)
T cd06657 214 PPYFNEPPLKAMKMI----------------------------RDNLPPKLK------------NLHKVSPSLKGFLDRL 253 (292)
T ss_pred CCCCCCCHHHHHHHH----------------------------HhhCCcccC------------CcccCCHHHHHHHHHH
Confidence 233222111111000 000111111 0112466778899999
Q ss_pred HhhcCcccccccchhhccccccccccc
Q 011399 454 LFKDGRFRHVLYSPFTINLVDFEFVVC 480 (487)
Q Consensus 454 L~~d~~~r~~~~~~~~~~~~~~~~~~~ 480 (487)
|..||..|++..+.+.|+||..-..|-
T Consensus 254 l~~~P~~R~~~~~ll~~~~~~~~~~~~ 280 (292)
T cd06657 254 LVRDPAQRATAAELLKHPFLAKAGPPS 280 (292)
T ss_pred HhCCcccCcCHHHHhcChHHhccCCCc
Confidence 999999999999999999997665443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-23 Score=208.22 Aligned_cols=283 Identities=18% Similarity=0.224 Sum_probs=169.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.||||+......... ....+...+..+....|++++.+.+.+...
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------- 86 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL-----FAKRAYRELRLLKHMKHENVIGLLDVFTPD--------- 86 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccchH-----HHHHHHHHHHHHHhcCCCCccceeeeecCC---------
Confidence 789999999999999988999999998854311100 000011111111122355555544432110
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.........++||||+ |++|.++........+....+..++..++.++|+.|++|+|
T Consensus 87 ----------------------~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~d 143 (343)
T cd07880 87 ----------------------LSLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRD 143 (343)
T ss_pred ----------------------ccccccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 0001113458999999 66777664333333444455667888899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
+||+||+++.+|.++++|||++..+..... +......+..|+.+. .....+.+.|+||+|+.+++++.+.
T Consensus 144 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~y~aPE~~~----~~~~~~~~~Di~slG~ll~~l~~g~-- 213 (343)
T cd07880 144 LKPGNLAVNEDCELKILDFGLARQTDSEMT----GYVVTRWYRAPEVIL----NWMHYTQTVDIWSVGCIMAEMLTGK-- 213 (343)
T ss_pred CCHHHEEEcCCCCEEEeecccccccccCcc----ccccCCcccCHHHHh----CCCCCCcHHHHHHHHHHHHHHHhCC--
Confidence 999999999999999999999987653311 111112223344332 1123567899999999999999743
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
.++...+.......+.. .....|+.+...+..... ......+ |.+.. +- ...+....++.+++.+.+|
T Consensus 214 ~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-----~~-~~~~~~~~~~~~~~li~~~ 281 (343)
T cd07880 214 PLFKGHDHLDQLMEIMK----VTGTPSKEFVQKLQSEDA-KNYVKKL-PRFRK-----KD-FRSLLPNANPLAVNVLEKM 281 (343)
T ss_pred CCCCCCCHHHHHHHHHH----hcCCCCHHHHHhhcchhH-HHHHHhc-cccCc-----ch-HHHhccCCChHHHHHHHHH
Confidence 34444333222222221 122334443322211100 0000000 11110 01 1223346788999999999
Q ss_pred HhhcCcccccccchhhcccccc
Q 011399 454 LFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 454 L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
|..||.+|++..+.+.|+||.-
T Consensus 282 l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 282 LVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred cCCChhhCCCHHHHhcCccHhh
Confidence 9999999999999999999953
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-24 Score=212.42 Aligned_cols=283 Identities=16% Similarity=0.151 Sum_probs=153.5
Q ss_pred CcccccccccEEEEEEEcc--CCcEEEEEEecCCh-HHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 133 PSPIAAASLGQVYKAQLKY--SGQIVAVKVQRPGI-EEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~--~g~~VAVKv~~p~~-~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
...||+|+||.||+|+.+. ++..||+|.+.... ......++.+++ ...|+|++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~----------~l~h~niv-------------- 61 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLR----------ELKHPNVI-------------- 61 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHH----------hCCCCCee--------------
Confidence 3679999999999999763 56899999886431 111111111111 11133222
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHHHh--------cCCCH--HHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIES--------QGLKV--LDLVNTGIQ 278 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~--------~~~~~--~~~~~~~i~ 278 (487)
.+..++. ......+++|||+++ ++.+...... ...+. ...+..++.
T Consensus 62 ----------------------~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 118 (317)
T cd07867 62 ----------------------ALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQIL 118 (317)
T ss_pred ----------------------eEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHH
Confidence 2222222 123456899999987 5544432111 11222 334567888
Q ss_pred HHHHHHHHCCccccCCCCCCeEE----cCCCcEEEEecCCCCCCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLA----TPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili----~~~g~i~l~DFGla~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
.|+.|+|+.|++|||+||+||++ +.+|.++|+|||+++.+...... .......+..+..||.+. .....+
T Consensus 119 ~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~----~~~~~~ 194 (317)
T cd07867 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL----GARHYT 194 (317)
T ss_pred HHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhc----CCCccC
Confidence 99999999999999999999999 46678999999999876433211 011111122233344321 123457
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCc--HH----HHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCCh
Q 011399 353 PDVDVTPIVPALRNFFDDALNSSVSELN--FK----TIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~~~~~~~~~~~~--~~----~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (487)
.++|+||+|+.+++++++.. ++.... .. .....+...........+..+... +.... ...+...+.-
T Consensus 195 ~~~DiwSlG~il~el~tg~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~ 267 (317)
T cd07867 195 KAIDIWAIGCIFAELLTSEP--IFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDI-RKMPE----YPTLQKDFRR 267 (317)
T ss_pred cHHHHHhHHHHHHHHHhCCC--CcccccccccccccccHHHHHHHHHhcCCCChhhhhhh-hhccc----chhhhhhhcc
Confidence 78999999999999998532 221110 00 001112222222222111221110 00000 0000000000
Q ss_pred HHhHhHHHH---HHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 427 LAASYPYFA---KRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 427 ~~~~~p~~~---~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.....+.+. ......+++.+++.+.+||..||.+|.+..+.+.|+||
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 268 TTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred cccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000000011 11112456788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.1e-24 Score=208.60 Aligned_cols=274 Identities=21% Similarity=0.205 Sum_probs=161.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|++..+|+.||||+....... .+..++.++ ....|++++.+.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l----------~~~~~~~i~~~~~--------- 66 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKAL----------QACQHPYVVKLLD--------- 66 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHH----------HhCCCCCCcceee---------
Confidence 5699999999999999888999999998643211 011111100 0111333222222
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~ 286 (487)
. .......++||||+ |++|.+.........+. ...+..++..++.|+|+
T Consensus 67 ---------------------------~-~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 117 (286)
T cd07832 67 ---------------------------V-FPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA 117 (286)
T ss_pred ---------------------------E-EecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 12245678999999 99998775433333343 33445778889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|+|+||+||+++.+|.++|+|||++..+................+..||... .....+++.|+||+|+.+++
T Consensus 118 ~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~Di~slG~~l~~ 193 (286)
T cd07832 118 NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY----GARKYDPGVDLWAVGCIFAE 193 (286)
T ss_pred CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeee----ccccCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999998876543211111111122223333221 12234678999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++ ..++...+-.... ...........+.... ....+.....+...-.+. .+ ......+.+..+
T Consensus 194 l~tg--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~ 258 (286)
T cd07832 194 LLNG--SPLFPGENDIEQL---AIVFRTLGTPNEETWP-GLTSLPDYNKITFPESKP-------IP--LEEIFPDASPEA 258 (286)
T ss_pred HHcC--CcCcCCCCHHHHH---HHHHHHcCCCChHHHh-hccCcchhhcccCCCCCc-------ch--HHHhCCCccHHH
Confidence 9986 2333322221111 1111111111111110 000010000010000010 11 122334556899
Q ss_pred HHHHHHHHhhcCcccccccchhhccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
++.+..||..||+.|++..+.+.|+||.
T Consensus 259 ~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 259 LDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred HHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 9999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.9e-24 Score=212.61 Aligned_cols=93 Identities=16% Similarity=0.198 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+..++..|+.|+|+.|++|||+||+|||++.++.++|+|||+++.+.........+. ....+..++++....+..+
T Consensus 179 ~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~ 254 (338)
T cd05102 179 YSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGS----ARLPLKWMAPESIFDKVYT 254 (338)
T ss_pred HHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccC----CCCCccccCcHHhhcCCCC
Confidence 456888899999999999999999999999999999999999987643211100110 0111223344444445568
Q ss_pred CCCCcchHHHHHHHHHH
Q 011399 353 PDVDVTPIVPALRNFFD 369 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~ 369 (487)
.++|+||+|+.++++++
T Consensus 255 ~~sDiwslG~il~el~~ 271 (338)
T cd05102 255 TQSDVWSFGVLLWEIFS 271 (338)
T ss_pred cccCHHHHHHHHHHHHh
Confidence 88999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-23 Score=202.54 Aligned_cols=254 Identities=14% Similarity=0.080 Sum_probs=160.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcc-cCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDII-TTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
++||+|++|+||+|..+.+|+.||+|+..+.....-.. . +.+....+.+.... |+++.++.+.+..
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~-~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~--------- 73 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKK-V---KYVKIEKEVLTRLNGHPGIIKLYYTFQD--------- 73 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHH-H---HHHHHHHHHHHhcccCCCchhHHHHhcC---------
Confidence 67999999999999998899999999986421110000 0 11111111112223 6666666554321
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
.+..++||||++|++|.+..... .........+..++..++.++|+.|++|
T Consensus 74 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H 125 (280)
T cd05581 74 ----------------------------EENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIH 125 (280)
T ss_pred ----------------------------CceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 24567999999999998774432 2233344555678888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHH--------------HHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII--------------GHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
+|+||+||+++.+|.++++|||++..+......... .............++++....+..+...|+
T Consensus 126 ~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di 205 (280)
T cd05581 126 RDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDL 205 (280)
T ss_pred cCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhH
Confidence 999999999999999999999998876543211000 000000111122233333334445778999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
|++|+.+++++++. .++...+.......+. ......
T Consensus 206 ~slG~~l~~l~~g~--~p~~~~~~~~~~~~~~----~~~~~~-------------------------------------- 241 (280)
T cd05581 206 WALGCIIYQMLTGK--PPFRGSNEYLTFQKIL----KLEYSF-------------------------------------- 241 (280)
T ss_pred HHHHHHHHHHHhCC--CCCCCccHHHHHHHHH----hcCCCC--------------------------------------
Confidence 99999999988733 3333322111111000 000000
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccc----cchhhcccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVL----YSPFTINLV 473 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~----~~~~~~~~~ 473 (487)
....++..++.+.+||..||..|++. .+.+.|+||
T Consensus 242 -~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 242 -PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred -CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 01226778889999999999999999 888899987
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=197.18 Aligned_cols=226 Identities=15% Similarity=0.146 Sum_probs=155.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.+|+|.||.|-+++.+.+|+.+|+|++++.+.- .+|- .-+.+. ....+..-+||-+..+--.|+.
T Consensus 174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKevii--akdE-VAHTlT-E~RVL~~~~HPFLt~LKYsFQt---------- 239 (516)
T KOG0690|consen 174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVII--AKDE-VAHTLT-ENRVLQNCRHPFLTSLKYSFQT---------- 239 (516)
T ss_pred HHhcCCccceEEEEeecccCceeehhhhhhhhee--ehHH-hhhhhh-HHHHHHhccCcHHHHhhhhhcc----------
Confidence 7899999999999999999999999999855211 1110 000000 0000111234443333332221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
..+.|.||||..||.|.-... .+....+..+.+...|.+||.|||+.+|+.|
T Consensus 240 ---------------------------~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYR 292 (516)
T KOG0690|consen 240 ---------------------------QDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYR 292 (516)
T ss_pred ---------------------------CceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeee
Confidence 255689999999999975433 3445678888999999999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCC-CH-HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSET-PE-EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|.+|+|+++||+|||.|||+++.- .. ....++|| .|+++++++..-.-++..+|.|.+|+.+|||+.+
T Consensus 293 DlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCG--------TPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCG 364 (516)
T KOG0690|consen 293 DLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCG--------TPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCG 364 (516)
T ss_pred echhhhheeccCCceEeeecccchhcccccceeccccC--------ChhhcCchhhccccccceeehhhhhHHHHHHHhc
Confidence 99999999999999999999999852 21 22234444 5888888777666668889999999999999985
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (487)
. .|+-..+-..+++-+...-.++|-.+.|+...++..+
T Consensus 365 R--LPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGL 402 (516)
T KOG0690|consen 365 R--LPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGL 402 (516)
T ss_pred c--CcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHH
Confidence 4 3555555555554443333345555666655444444
|
|
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=202.57 Aligned_cols=262 Identities=16% Similarity=0.169 Sum_probs=159.9
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChH--HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE--EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~--~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
.+..|+.. +.||+|+||+||+|....+++.||+|+...... ..+..++.+++.+. .|+|++.+.+.+
T Consensus 4 ~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~---------~h~~i~~~~~~~ 72 (272)
T cd06637 4 PAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS---------HHRNIATYYGAF 72 (272)
T ss_pred hhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc---------CCCCeeeEeeEE
Confidence 44556555 679999999999999988999999999863311 11111111111110 133333332211
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCC--HHHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLK--VLDLVNTGIQ 278 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~--~~~~~~~~i~ 278 (487)
... .........+++|||+.|++|.++..... .... ....+..++.
T Consensus 73 ~~~-------------------------------~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~ 121 (272)
T cd06637 73 IKK-------------------------------NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 121 (272)
T ss_pred eec-------------------------------CCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHH
Confidence 100 00001234689999999999988754322 1223 3344567888
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
.++.|+|+.|++|+|+||+||+++.++.++|+|||++..+..... ....+ +..+..||.+...-...+..+.++|
T Consensus 122 ~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g---~~~y~aPE~~~~~~~~~~~~~~~~D 198 (272)
T cd06637 122 RGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIG---TPYWMAPEVIACDENPDATYDFKSD 198 (272)
T ss_pred HHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccc---cccccCHhHhccccCcCCCCCchhh
Confidence 899999999999999999999999999999999999886643211 11111 2223344433210000223467899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .++...........+ .....+..
T Consensus 199 v~slGv~l~el~~g~--~p~~~~~~~~~~~~~----------------------------~~~~~~~~------------ 236 (272)
T cd06637 199 LWSLGITAIEMAEGA--PPLCDMHPMRALFLI----------------------------PRNPAPRL------------ 236 (272)
T ss_pred HHHHHHHHHHHHhCC--CCccccCHHHHHHHH----------------------------hcCCCCCC------------
Confidence 999999999999743 233222111000000 00000000
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.....++..++.+.+||..||..|.+..+.+.|+||
T Consensus 237 -~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 237 -KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred -CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 011245678899999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.6e-24 Score=211.27 Aligned_cols=286 Identities=19% Similarity=0.155 Sum_probs=167.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.++.+|+.||+|+.+...... .... .+..
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~------------------------------------~~~~ 55 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPI------------------------------------SSLR 55 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcc------------------------------------hhhH
Confidence 67999999999999998899999999986432110 0000 0111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC-CCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ .+..-+.+..++.+. .+..++||||+++ +|.++........ .....+..++..++.++|..|++
T Consensus 56 E~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 130 (309)
T cd07845 56 EITLLLNL----RHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFII 130 (309)
T ss_pred HHHHHHhC----CCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 11111111 111112222222221 2446899999986 5655533222222 33344567888899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||+||+++.+|.++|+|||++..+...... .........+..||.+. .....+.+.|+||+|+.+++++.+
T Consensus 131 H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~DvwslG~il~el~~g 205 (309)
T cd07845 131 HRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP-MTPKVVTLWYRAPELLL----GCTTYTTAIDMWAVGCILAELLAH 205 (309)
T ss_pred cCCCCHHHEEECCCCCEEECccceeeecCCccCC-CCcccccccccChhhhc----CCCCcCchHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999876532110 01111112233344321 122346789999999999999985
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+.......+......-.....+. .+.+.. ...++......+.+. ......++...+.+
T Consensus 206 ~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~~~~~li 270 (309)
T cd07845 206 K--PLLPGKSEIEQLDLIIQLLGTPNESIWPG----FSDLPL--------VGKFTLPKQPYNNLK-HKFPWLSEAGLRLL 270 (309)
T ss_pred C--CCCCCCCHHHHHHHHHHhcCCCChhhchh----hhcccc--------cccccccCCCCCchH-HhccccCHHHHHHH
Confidence 3 34444443333333332211100001011 011100 001111000001111 12223588999999
Q ss_pred HHHHhhcCcccccccchhhcccccccccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVDFEFVVCD 481 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~ 481 (487)
.+||..||++|++..+.+.|+||.-..+||+
T Consensus 271 ~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~ 301 (309)
T cd07845 271 NFLLMYDPKKRATAEEALESSYFKEKPLPCE 301 (309)
T ss_pred HHHhcCChhhCcCHHHHhcChhhccCCCCCC
Confidence 9999999999999999999999998888875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.7e-24 Score=206.95 Aligned_cols=275 Identities=19% Similarity=0.150 Sum_probs=156.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|+.+.+|+.||||+++....... .... +..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-------------------------------~~~~------~~~ 48 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG-------------------------------VPST------AIR 48 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCC-------------------------------chHH------HHH
Confidence 679999999999999988999999999864311100 0000 111
Q ss_pred HHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHh--cCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
|...+.++ . ++.+ .+... .......++||||++| ++.+...... ...+.. ..+..++..+|.|+|+.|
T Consensus 49 e~~~l~~l----~-h~~i~~~~~~-~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 121 (285)
T cd07861 49 EISLLKEL----Q-HPNIVCLQDV-LMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR 121 (285)
T ss_pred HHHHHHhc----C-CCCEeeeEEE-EeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 11111111 1 1111 11111 1123567899999985 5655432211 223333 345678888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|+||+||+++.+|.++|+|||++......... .........+..||.+. .....+.++|+||+|+.+++++
T Consensus 122 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~Dv~slG~il~~l~ 196 (285)
T cd07861 122 VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV-YTHEVVTLWYRAPEVLL----GSPRYSTPVDIWSIGTIFAEMA 196 (285)
T ss_pred eeecCCCHHHEEEcCCCcEEECcccceeecCCCccc-ccCCcccccccChHHhc----CCCCcCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998765432110 00001122233344321 1122366789999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
++. .++...+.............. ..+..+ .....+..... .-|.+ ..+.. .......++++++
T Consensus 197 tg~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~-~~~~~-----~~~~~-~~~~~~~~~~~~~ 260 (285)
T cd07861 197 TKK--PLFHGDSEIDQLFRIFRILGT---PTEDVW----PGVTSLPDYKN-TFPKW-----KKGSL-RSAVKNLDEDGLD 260 (285)
T ss_pred HCC--CCCCCCCHHHHHHHHHHHhCC---CChhhh----hcchhhHHHHh-hcccc-----Ccchh-HHhcCCCCHHHHH
Confidence 853 344333222222222111111 000000 00000000000 00110 01111 1122357899999
Q ss_pred HHHHHHhhcCcccccccchhhcccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+.+||..||..|++..+.+.|+||
T Consensus 261 li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 261 LLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHHHHhcCChhhCCCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-23 Score=201.64 Aligned_cols=270 Identities=16% Similarity=0.126 Sum_probs=159.6
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|.++..++||+|++|+||+|....+|+.||||..+.........+ .......+.
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~-----------------------~~~~~~~~~--- 54 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHD-----------------------SRQKDMVKA--- 54 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccc-----------------------hHHHHHHHH---
Confidence 455667899999999999999888899999998763311110000 000001111
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
+..|...+.++ +++.+.-..-+....+..++||||++|++|.+..... .........+..++..++.++|+
T Consensus 55 ---~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~ 126 (272)
T cd06629 55 ---LRSEIETLKDL-----DHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHS 126 (272)
T ss_pred ---HHHHHHHHHhc-----CCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh
Confidence 12222222222 1222111111223346678999999999998874332 12223344556788889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
.|++|+|+||+||+++.+|.++++|||++.......... .........+..|+..... ....+.+.|+||+|+.++
T Consensus 127 ~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~~~Dv~slG~~l~ 203 (272)
T cd06629 127 KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSY---SQGYSAKVDIWSLGCVVL 203 (272)
T ss_pred CCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccc---cCCCCccchhHHHHHHHH
Confidence 999999999999999999999999999987654221100 0000011122233332110 112477899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++. .++...+.......+. .....+.+. .......++.
T Consensus 204 ~l~~g~--~p~~~~~~~~~~~~~~---------------------------~~~~~~~~~----------~~~~~~~~~~ 244 (272)
T cd06629 204 EMFAGR--RPWSDEEAIAAMFKLG---------------------------NKRSAPPIP----------PDVSMNLSPV 244 (272)
T ss_pred HHHhCC--CCCcCcchHHHHHHhh---------------------------ccccCCcCC----------ccccccCCHH
Confidence 999843 2332222111000000 000011110 0111234678
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+++.+.+||..||..|++..+-+.|+||
T Consensus 245 ~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 245 ALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 8899999999999999999899999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-23 Score=205.05 Aligned_cols=246 Identities=18% Similarity=0.119 Sum_probs=152.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.+..+++.||+|+.++..... .+....+....+.+....|++++.+++
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~-------------- 68 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----LKQVEHVLNEKRILQSIRHPFLVNLYG-------------- 68 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCCCCCccceee--------------
Confidence 67999999999999998889999999986431100 000000000000111111333322222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
.+ ......+++|||++|++|.+...... ........+..++..++.++|+.|++|+
T Consensus 69 ----------------------~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~ 125 (290)
T cd05580 69 ----------------------SF-QDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYR 125 (290)
T ss_pred ----------------------EE-EcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 11 22355789999999999987743321 2223334455778889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|+||.||+++.+|.++|+|||++..+..... .. .+.+..++++...-+..+.+.|+||+|+.+++++++.
T Consensus 126 dl~p~nili~~~~~~kl~dfg~~~~~~~~~~-~~--------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~- 195 (290)
T cd05580 126 DLKPENLLLDSDGYIKITDFGFAKRVKGRTY-TL--------CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGY- 195 (290)
T ss_pred CCCHHHEEECCCCCEEEeeCCCccccCCCCC-CC--------CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCC-
Confidence 9999999999999999999999987654311 11 1222233333333344567899999999999999843
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.++...+.......+. . ..+. +....++.+++.+.+
T Consensus 196 -~p~~~~~~~~~~~~~~----~-------------------------~~~~--------------~~~~~~~~l~~li~~ 231 (290)
T cd05580 196 -PPFFDDNPIQIYEKIL----E-------------------------GKVR--------------FPSFFSPDAKDLIRN 231 (290)
T ss_pred -CCCCCCCHHHHHHHHh----c-------------------------CCcc--------------CCccCCHHHHHHHHH
Confidence 3333333211111110 0 0000 001235677788888
Q ss_pred HHhhcCcccc-----cccchhhccccc
Q 011399 453 LLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
||..||..|+ +..+.+.|+||.
T Consensus 232 ~l~~~p~~R~~~~~~~~~~l~~~~~~~ 258 (290)
T cd05580 232 LLQVDLTKRLGNLKNGVNDIKNHPWFA 258 (290)
T ss_pred HccCCHHHccCcccCCHHHHHcCcccc
Confidence 9999998888 445667788873
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-23 Score=202.05 Aligned_cols=260 Identities=19% Similarity=0.159 Sum_probs=164.4
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
....|..+ ..||+|+||.||+|....+|+.||+|+......... -.+.+. +..+....|++++.+.+.+..
T Consensus 19 ~~~~~~~~--~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~---~~~~~e----~~~l~~l~hp~i~~~~~~~~~ 89 (297)
T cd06659 19 PRSLLENY--IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRR---ELLFNE----VVIMRDYQHQNVVEMYKSYLV 89 (297)
T ss_pred chhhHHhh--hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchH---HHHHHH----HHHHHhCCCCchhhhhhheee
Confidence 33444544 579999999999999988899999999864321110 011111 112223346777666654321
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (487)
....+++|||++|++|.+..............+..++..++.+
T Consensus 90 -------------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~ 132 (297)
T cd06659 90 -------------------------------------GEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCY 132 (297)
T ss_pred -------------------------------------CCeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence 2456899999999999876433222333344556778889999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+|+.|++|+|+||+||+++.+|.++|+|||++..+....... ........+..|| ....+-.+.+.|+||+|+.
T Consensus 133 LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE-----~~~~~~~~~~~Dv~slG~i 206 (297)
T cd06659 133 LHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR-KSLVGTPYWMAPE-----VISRTPYGTEVDIWSLGIM 206 (297)
T ss_pred HHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc-cceecCccccCHH-----HHccCCCCchhhHHHHHHH
Confidence 999999999999999999999999999999987654332110 0011112223333 3333445778999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++.+.. ++...+.......+. ....+... .....+
T Consensus 207 l~el~~g~~--p~~~~~~~~~~~~~~----------------------------~~~~~~~~------------~~~~~~ 244 (297)
T cd06659 207 VIEMVDGEP--PYFSDSPVQAMKRLR----------------------------DSPPPKLK------------NAHKIS 244 (297)
T ss_pred HHHHHhCCC--CCCCCCHHHHHHHHh----------------------------ccCCCCcc------------ccCCCC
Confidence 999987432 322211111110000 00000000 011245
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhcccccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVDFEF 477 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~ 477 (487)
+.+++.+.+||..+|..|.+..+-+.|+||..-.
T Consensus 245 ~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~ 278 (297)
T cd06659 245 PVLRDFLERMLTREPQERATAQELLDHPFLLQTG 278 (297)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhhChhhccCC
Confidence 6778899999999999999999999999985443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.6e-25 Score=212.03 Aligned_cols=252 Identities=19% Similarity=0.200 Sum_probs=158.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|....+|+.||+|+............ . ...
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~-------------------------------~------~~~ 47 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE-------------------------------E------NIR 47 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH-------------------------------H------HHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccc-------------------------------h------hhh
Confidence 679999999999999998999999999976533321100 0 011
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.++. ++.+.-..-+.......+++|||++|++|.++.. ...........+..++..+|.+||+.|++|+
T Consensus 48 e~~~~~~l~-----~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~ 122 (260)
T PF00069_consen 48 EIKILRRLR-----HPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHR 122 (260)
T ss_dssp HHHHHHHHT-----BTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred hhhcccccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 233333331 2222111112222566789999999999988755 2222233445556778889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcchHHHHHHHHHHHh
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA-LDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|+||+||+++.+|.++|+|||.+..+..... ..........+..||. .. ....+.+.|+||+|+.+++++++.
T Consensus 123 dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~-----~~~~~~~~~~~Di~slG~il~~l~~~~ 196 (260)
T PF00069_consen 123 DIKPENILLDENGEVKLIDFGSSVKLSENNE-NFNPFVGTPEYMAPEV-----LQQGKKYTRKSDIWSLGIILYELLTGK 196 (260)
T ss_dssp SBSGGGEEESTTSEEEESSGTTTEESTSTTS-EBSSSSSSGGGSCHHH-----HTTTSSBSTHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccccccccccccccccccc-cccccccccccccccc-----ccccccccccccccccccccccccccc
Confidence 9999999999999999999999864311100 0000011122334443 33 456688899999999999999843
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc--cCCCHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL--TDPNPYLRDA 449 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~--~~~~p~~r~~ 449 (487)
.++...+.......+..... . + ...... ...++.+++.
T Consensus 197 --~p~~~~~~~~~~~~~~~~~~------------------------~-------------~-~~~~~~~~~~~~~~l~~l 236 (260)
T PF00069_consen 197 --LPFEESNSDDQLEIIEKILK------------------------R-------------P-LPSSSQQSREKSEELRDL 236 (260)
T ss_dssp --SSSTTSSHHHHHHHHHHHHH------------------------T-------------H-HHHHTTSHTTSHHHHHHH
T ss_pred --cccccccchhhhhhhhhccc------------------------c-------------c-ccccccccchhHHHHHHH
Confidence 33333321111111111000 0 0 000000 0112788899
Q ss_pred HHHHHhhcCcccccccchhhcccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.+||..||+.|++..+.+.|+||
T Consensus 237 i~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 237 IKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHccCChhHCcCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-23 Score=208.26 Aligned_cols=225 Identities=16% Similarity=0.152 Sum_probs=156.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|-||.||.|.++ ....||||.++++... +-+|..
T Consensus 212 ~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~----------------------------------------~~~f~~ 250 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS----------------------------------------PEAFLR 250 (468)
T ss_pred HHhcCCccceEEEEEEc-CCCcccceEEeccccC----------------------------------------hhHHHH
Confidence 56999999999999997 5569999999876211 113455
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~--~~~~~~~~i~~~l~~lh~~giv 290 (487)
||..+.++++. .-|..-. +.....+.+|||||++.|+|.+++.. .....+ ....+..+|+.|++||.++++|
T Consensus 251 Ea~iMk~L~H~----~lV~l~g-V~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~I 325 (468)
T KOG0197|consen 251 EAQIMKKLRHE----KLVKLYG-VCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYI 325 (468)
T ss_pred HHHHHHhCccc----CeEEEEE-EEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCcc
Confidence 66666555432 1111111 22222457999999999999998665 222233 3344568899999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||-..||||++++.+||+||||++.+.++....-.+ ..-...+.+++....|..+.++|+||||..|+|+++.
T Consensus 326 HRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~-----~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~ 400 (468)
T KOG0197|consen 326 HRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG-----GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTY 400 (468)
T ss_pred chhhhhhheeeccCceEEEcccccccccCCCceeecCC-----CCCCceecCHHHHhhCCcccccceeehhhhHHHHhcc
Confidence 99999999999999999999999999665543211111 0112233455566778889999999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALILRSL 410 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~r~l 410 (487)
...|...++...++..+...-+ ..|-..|+++-.+++..
T Consensus 401 -G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 401 -GRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSC 440 (468)
T ss_pred -CCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence 4567788888888877754332 23555777766555544
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-24 Score=214.48 Aligned_cols=288 Identities=10% Similarity=0.115 Sum_probs=158.7
Q ss_pred cccccc--cccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAA--SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~G--s~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+| +||.||+++.+.+|+.||||.++...... .....+.+|
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------~~~~~~~~e--- 49 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN-------------------------------EMVTFLQGE--- 49 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccH-------------------------------HHHHHHHHH---
Confidence 458888 78999999999999999999986432110 000011111
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
...+. .+ +++++.-..-+....+..++||||++|++|.++..... .+.+. ...+..++..+|.|+|+.|
T Consensus 50 ---~~~l~----~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 50 ---LHVSK----LF-NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred ---HHHHH----hc-CCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11111 11 12222111112233456789999999999988754322 22333 3345577888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcchHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYAL--DFLSPDVDVTPIVPALR 365 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~Di~sl~~~l~ 365 (487)
++|+|+||.||+++.++.+++.|||....+... ..............+....++++.... ...+.++|+||+|+.++
T Consensus 122 iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~ 201 (327)
T cd08227 122 YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 201 (327)
T ss_pred EecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHH
Confidence 999999999999999999999999865543211 100000000000001111233333322 22467899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCC-----CCCChHHHHHHHHHHHHHHhhhhhCCCCC---hHHhHhHH----
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYP-----FNVPAYYALILRSLTVLEGLALYADPNFK---VLAASYPY---- 433 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~p~~~~~l~r~l~~leg~~~~ldP~~~---~~~~~~p~---- 433 (487)
+++++. .++...+.......... ...+ ...|+.... .+.. ....+..+. ......+.
T Consensus 202 el~~g~--~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 270 (327)
T cd08227 202 ELANGH--VPFKDMPATQMLLEKLN--GTVPCLLDTTTIPAEELT-MKPS------RSGANSGLGESTTVSTPRPSNGES 270 (327)
T ss_pred HHHHCC--CCCCCcchhHHHHHHhc--CCccccccccchhhhhcc-cCCc------ccCCcCCCCcccccCCcCccccCC
Confidence 999854 34444333222211111 0000 011111000 0000 000000000 00000000
Q ss_pred HHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 434 FAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 434 ~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.........++.+++.+.+||..||++|++..+.+.|+||.
T Consensus 271 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~ 311 (327)
T cd08227 271 SSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 311 (327)
T ss_pred cccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence 00011224578999999999999999999999999999994
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-23 Score=205.77 Aligned_cols=255 Identities=17% Similarity=0.116 Sum_probs=150.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+++.||+|......... ... ... +..
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~-----------------------------~~~------~~~ 50 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQ-----------------------------IQQ------VFV 50 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHH-----------------------------HHH------HHH
Confidence 67999999999999999899999999886431100 000 001 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC--CCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+..+ +++ .+++++..+ ....++||||++|++|.++..... ........+..++..++.|+|+.|++
T Consensus 51 e~~~l~~~-----~~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 123 (305)
T cd05609 51 ERDILTFA-----ENP--FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIV 123 (305)
T ss_pred HHHHHHhC-----CCC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 22222211 122 234444433 334589999999999988753321 12223334456778899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH---------HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI---------IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
|+|+||+||+++.+|.++++|||+++.........+ .........+....++++....+..++++|+||+|
T Consensus 124 H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 203 (305)
T cd05609 124 HRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMG 203 (305)
T ss_pred ccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHH
Confidence 999999999999999999999998863110000000 00000000111222333333334557889999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
+.+++++++.. ++.+.+...+...... + ....|... ..
T Consensus 204 ~vl~el~~g~~--pf~~~~~~~~~~~~~~------------------------~--~~~~~~~~--------------~~ 241 (305)
T cd05609 204 IILYEFLVGCV--PFFGDTPEELFGQVIS------------------------D--DIEWPEGD--------------EA 241 (305)
T ss_pred HHHHHHHhCCC--CCCCCCHHHHHHHHHh------------------------c--ccCCCCcc--------------cc
Confidence 99999987432 3322222111111000 0 00001000 12
Q ss_pred CCHHHHHHHHHHHhhcCccccc---ccchhhcccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHV---LYSPFTINLV 473 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~---~~~~~~~~~~ 473 (487)
.++.+++.+.+||..||..|++ ..+.+.|+||
T Consensus 242 ~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~ 276 (305)
T cd05609 242 LPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFF 276 (305)
T ss_pred CCHHHHHHHHHHhccChhhccCccCHHHHHhCccc
Confidence 4567788888999999998887 4666788887
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-23 Score=217.95 Aligned_cols=206 Identities=18% Similarity=0.156 Sum_probs=140.4
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhc-ccCCHHHHHHHHHHHHHHHhcH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
++-|++|+||+||.|.+...|.+||+|.+.-.-+ .-++.+.+.++.+..+ .|+||+.+++..... +.
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de-------~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~--~~--- 109 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDE-------EALNAVKREIDIMKLLSGHKNIVSYIDSSAIN--RS--- 109 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCH-------HHHHHHHHHHHHHHHhcCCCceeeEecccccc--cc---
Confidence 4679999999999999986669999999864422 2222222222222222 288888888731100 00
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcC--CCHHHHHHHHHHHHHHHHHHCC
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQG--LKVLDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~--~~~~~~~~~~i~~~l~~lh~~g 288 (487)
.+.. .-+..|.||||.|+.|-|+...+ ..+ ++...-+..+++.|+.+||...
T Consensus 110 ---------------~~~~----------~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~ 164 (738)
T KOG1989|consen 110 ---------------SNNG----------VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK 164 (738)
T ss_pred ---------------CCCc----------eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC
Confidence 0000 02346899999999998876532 223 4445555677888999999998
Q ss_pred --ccccCCCCCCeEEcCCCcEEEEecCCCCCC--CH---HHHHHH---HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 289 --YFHADPHPGNLLATPEGKLAFLDFGMMSET--PE---EARFAI---IGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 289 --ivH~Dlkp~Nili~~~g~i~l~DFGla~~l--~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
+||||||-+||||+.+|..||||||.|... .+ ..+..+ ...+.+..||.||.+ ++|+---++++.|||
T Consensus 165 pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMI--Dlysg~pI~eKsDIW 242 (738)
T KOG1989|consen 165 PPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMI--DLYSGLPIGEKSDIW 242 (738)
T ss_pred CccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHH--hhhcCCCCcchhHHH
Confidence 999999999999999999999999998753 22 122111 122335677888865 455555679999999
Q ss_pred hHHHHHHHHHHHhccCCCCcC
Q 011399 359 PIVPALRNFFDDALNSSVSEL 379 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~ 379 (487)
+|||.||.++- +..|+++-
T Consensus 243 ALGclLYkLCy--~t~PFe~s 261 (738)
T KOG1989|consen 243 ALGCLLYKLCY--FTTPFEES 261 (738)
T ss_pred HHHHHHHHHHH--hCCCcCcC
Confidence 99999999874 55677654
|
|
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.8e-23 Score=202.53 Aligned_cols=278 Identities=16% Similarity=0.126 Sum_probs=166.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHH-HHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA-IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~-~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||+|++|+||+|.++.+|+.||+|+........ ...+ +...++.+....|++++.+.+.+..
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~------~~~e~~~l~~l~h~~i~~~~~~~~~--------- 71 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKI------AMREIRMLKQLRHENLVNLIEVFRR--------- 71 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHH------HHHHHHHHHhcCCcchhhHHHhccc---------
Confidence 67999999999999998789999999875332111 0000 1111111222346777666654321
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
....++||||++|+.+.++.... .........+..++..++.|+|+.|++|
T Consensus 72 ----------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h 123 (286)
T cd07846 72 ----------------------------KKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIH 123 (286)
T ss_pred ----------------------------CCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 24568999999998887653321 1222333444567888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|++|+||++++++.++|+|||++..+...... .........+..||... ..+..+.+.|+||+|+.+++++++.
T Consensus 124 ~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~Dv~slG~~l~el~~g~ 198 (286)
T cd07846 124 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEV-YTDYVATRWYRAPELLV----GDTKYGRAVDIWAVGCLVTEMLTGE 198 (286)
T ss_pred cCCCHHHEEECCCCcEEEEeeeeeeeccCCccc-cCcccceeeccCcHHhc----cccccCchHhHHHHHHHHHHHHcCC
Confidence 999999999999999999999998876433211 11111122334444432 1123456799999999999999853
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+.......+...... +++.............+ ...|..... .+ ........++..++.+.
T Consensus 199 --~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~--~~~~~~~~~~~~~~li~ 264 (286)
T cd07846 199 --PLFPGDSDIDQLYHIIKCLGN----LIPRHQEIFQKNPLFAG---MRLPEVKEI---EP--LEKRFPKLSGLVLDLAK 264 (286)
T ss_pred --CCCCCCchHHHHHHHHHHhCC----CchhhHHHhccchHhhc---cccccccCc---ch--HHHhCCCcCHHHHHHHH
Confidence 333332222222222222211 11111100000000011 111221111 11 11223356788999999
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.||..+|..|++..+-+.|+||
T Consensus 265 ~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 265 QCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HHhcCCcccchhHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-23 Score=205.39 Aligned_cols=251 Identities=16% Similarity=0.147 Sum_probs=155.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.+..+|+.||+|+...+...... .. +..
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~--------------------------------~~------~~~ 48 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQ--------------------------------KQ------IMS 48 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHH--------------------------------HH------HHH
Confidence 6799999999999999889999999998644211100 01 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|...+.++ +++.+.-..-+.......++||||++|+++.... .........+..++..++.|+|+.|++|+|
T Consensus 49 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 120 (279)
T cd06619 49 ELEILYKC-----DSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR---KIPEHVLGRIAVAVVKGLTYLWSLKILHRD 120 (279)
T ss_pred HHHHHHhC-----CCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCEeeCC
Confidence 22211111 1222221111222235568999999999886431 222333445667888899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
+||.||+++.+|.++|+|||++..+.........+ .+..++++....+..+.+.|+||+|+.+++++++..
T Consensus 121 lkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~--------~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~- 191 (279)
T cd06619 121 VKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVG--------TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRF- 191 (279)
T ss_pred CCHHHEEECCCCCEEEeeCCcceecccccccCCCC--------ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCC-
Confidence 99999999999999999999998765432221222 222233333333445778999999999999997432
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
|+....-.. ....+.. .. +.+.....+.. .....++++++.+.+|
T Consensus 192 -pf~~~~~~~------------~~~~~~~---~~------~~~~~~~~~~~-------------~~~~~~~~~~~li~~~ 236 (279)
T cd06619 192 -PYPQIQKNQ------------GSLMPLQ---LL------QCIVDEDPPVL-------------PVGQFSEKFVHFITQC 236 (279)
T ss_pred -Cchhhcccc------------cccchHH---HH------HHHhccCCCCC-------------CCCcCCHHHHHHHHHH
Confidence 222110000 0000000 00 00000011110 0123567889999999
Q ss_pred HhhcCcccccccchhhccccc
Q 011399 454 LFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 454 L~~d~~~r~~~~~~~~~~~~~ 474 (487)
|..||..|++.-+.+.|+||.
T Consensus 237 l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 237 MRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred hhCChhhCCCHHHHhcCcccc
Confidence 999999999999999999984
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-23 Score=202.58 Aligned_cols=262 Identities=19% Similarity=0.188 Sum_probs=158.8
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
++.|+.. +.||+|++|.||+|.+..+|..+++|.......+....
T Consensus 4 ~~~~~i~--~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~--------------------------------- 48 (282)
T cd06643 4 EEFWEII--GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELED--------------------------------- 48 (282)
T ss_pred HHHHHHH--hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHH---------------------------------
Confidence 3444444 66999999999999999889999999986442221110
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSL 281 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l 281 (487)
+..|...+..+ +++.+ .+... .......++||||++|+++...........+ ....+..++..++
T Consensus 49 ------~~~e~~~l~~l-----~h~~ii~~~~~-~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L 116 (282)
T cd06643 49 ------YMVEIDILASC-----DHPNIVKLLDA-FYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEAL 116 (282)
T ss_pred ------HHHHHHHHHHC-----CCCCeeeEEEE-EeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 11121111111 11221 11111 1223567899999999999776433222333 3344557788899
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
.++|+.|++|+|+||.||+++.+|.++++|||++......... .........+..|+.+..........+...|+||+|
T Consensus 117 ~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 195 (282)
T cd06643 117 NYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR-RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 195 (282)
T ss_pred HHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccc-cccccccccccCHhhccccCCCCCCCCccchhhhHH
Confidence 9999999999999999999999999999999998765432110 000111122333443211111122345679999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
+.+++++.+. .++...+.......+. . ...|... . ...
T Consensus 196 vil~el~~g~--~p~~~~~~~~~~~~~~---~-------------------------~~~~~~~-----~-------~~~ 233 (282)
T cd06643 196 ITLIEMAQIE--PPHHELNPMRVLLKIA---K-------------------------SEPPTLA-----Q-------PSR 233 (282)
T ss_pred HHHHHHccCC--CCccccCHHHHHHHHh---h-------------------------cCCCCCC-----C-------ccc
Confidence 9999988632 3333322111111110 0 0001000 0 012
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.+..+++.+.+||..||..|++..+.+.|+||...
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 234 WSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 35678899999999999999999999999998643
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-23 Score=207.86 Aligned_cols=272 Identities=17% Similarity=0.142 Sum_probs=160.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+|..||+|..+....... ...+ .+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~--------------------------------~~~~------~~ 48 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAI--------------------------------RNQI------IR 48 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHH--------------------------------HHHH------HH
Confidence 679999999999999988999999999864422111 0111 11
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH-CCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE-YGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~givH 291 (487)
|.+.+.++ .+..-+.+...+ ......+++|||++|++|.++..... ........+..++..++.|+|+ .|++|
T Consensus 49 E~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H 123 (308)
T cd06615 49 ELKVLHEC----NSPYIVGFYGAF-YSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMH 123 (308)
T ss_pred HHHHHHhC----CCCCCCeEEEEE-eeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEE
Confidence 22211111 111111111222 12356789999999999988754321 2233445566788889999997 69999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||+||+++.+|.++|+|||++..+.........+ ...+..|| .+.....+.+.|+||+|+.+++++++.
T Consensus 124 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~---~~~~~aPE-----~~~~~~~~~~~DiwslG~~l~~l~~g~ 195 (308)
T cd06615 124 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPE-----RLQGTHYTVQSDIWSLGLSLVEMAIGR 195 (308)
T ss_pred CCCChHHEEEecCCcEEEccCCCcccccccccccCCC---CcCccChh-----HhcCCCCCccchHHHHHHHHHHHHhCC
Confidence 9999999999999999999999988764332211111 11222333 333344677899999999999999854
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChH------------HHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAY------------YALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~------------~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
. ++...+..... ..........+.. ...........+.+.....|.. ..
T Consensus 196 ~--p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 256 (308)
T cd06615 196 Y--PIPPPDAKELE----AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKL-------------PS 256 (308)
T ss_pred C--CCCCcchhhHH----HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccC-------------cC
Confidence 3 33222211111 1111000000000 0000000000011100001100 00
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
...++++++.+.+||..||..|.+..+.+.|+||.-
T Consensus 257 ~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 257 GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292 (308)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence 124678999999999999999999999999999954
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-23 Score=204.33 Aligned_cols=250 Identities=15% Similarity=0.115 Sum_probs=150.5
Q ss_pred ccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 011399 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~E 214 (487)
.||+|+||+||+|....+|+.||+|+..+........+. .+..|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~------------------------------------~~~~~ 44 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET------------------------------------LALNE 44 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHH------------------------------------HHHHH
Confidence 389999999999999878999999998653211100000 01111
Q ss_pred HHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 215 GQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 215 a~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
......+.. .+++.+ +..++ ......++||||+.|++|.+...... ........+..++..++.|+|+.|++|
T Consensus 45 ~~~~~~~~~--~~~~~i--~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 120 (278)
T cd05606 45 RIMLSLVST--GDCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120 (278)
T ss_pred HHHHHHHHh--CCCCcE--eeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 111111111 122322 22222 22345789999999999987643221 122333445677888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~~~ 370 (487)
+|+||+||+++.++.++|+|||++..+.........+ ....++++....+ ..+.++|+||+|+.+++++++
T Consensus 121 ~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~--------~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g 192 (278)
T cd05606 121 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG--------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 192 (278)
T ss_pred CCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC--------CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhC
Confidence 9999999999999999999999987664332211111 1222333333333 357789999999999999974
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++......... .+.. .. ....+. +....++.+++.+
T Consensus 193 ~--~p~~~~~~~~~~-~~~~------------------~~-------~~~~~~--------------~~~~~s~~~~~li 230 (278)
T cd05606 193 H--SPFRQHKTKDKH-EIDR------------------MT-------LTMAVE--------------LPDSFSPELRSLL 230 (278)
T ss_pred C--CCCCCCCccchH-HHHH------------------Hh-------hccCCC--------------CCCcCCHHHHHHH
Confidence 3 233322110000 0000 00 000111 1112467788888
Q ss_pred HHHHhhcCcccc-----cccchhhccccc
Q 011399 451 VELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
.+||..+|..|. +..+...|+||.
T Consensus 231 ~~~l~~~p~~R~~~~~~~~~~ll~~~~~~ 259 (278)
T cd05606 231 EGLLQRDVNRRLGCLGRGAQEVKEHPFFR 259 (278)
T ss_pred HHHhhcCHHhccCCCCCCHHHHHhCcccc
Confidence 899998888888 666777788883
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-24 Score=235.35 Aligned_cols=257 Identities=16% Similarity=0.127 Sum_probs=167.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||.|.||+||.|....+|+-.|||-++-...+ -+.++.++.....+-...|+|++.....=
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-----~k~~~~i~eEm~vlE~lnHpNlV~YyGVE------------ 1303 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-----HKTFKLIAEEMKVLEGLNHPNLVRYYGVE------------ 1303 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccc-----cccCcchHHHHHHHHhccCccccccCcee------------
Confidence 4699999999999999999999999987532111 22223333333333334577776654420
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
-.....+|-||||+||+|.++..... ..+...+.+..|+..++.|||++|||||
T Consensus 1304 -------------------------vHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHR 1358 (1509)
T KOG4645|consen 1304 -------------------------VHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHR 1358 (1509)
T ss_pred -------------------------ecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceec
Confidence 01133458999999999999854432 2244567788899999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHH---HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEA---RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
||||.||+++.+|-+|+.|||.|..+.... ...+.+++++.+|..||.+...- .-|- ....||||+||.+.||.+
T Consensus 1359 DIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~-~kG~-~~A~DiWslGCVVlEM~t 1436 (1509)
T KOG4645|consen 1359 DIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTK-GKGH-GGAADIWSLGCVVLEMAT 1436 (1509)
T ss_pred CCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccc-cCCC-CcchhhhcccceEEEeec
Confidence 999999999999999999999999876542 11222333333333333322110 0111 335799999999999887
Q ss_pred HhccCCCCcCcHH-HHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 370 DALNSSVSELNFK-TIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 370 ~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
+. .|..+++.. +++..++ ..+. |. +.+ +.+++.|+
T Consensus 1437 Gk--rPW~~~dne~aIMy~V~---~gh~-------------------------Pq----------~P~----~ls~~g~d 1472 (1509)
T KOG4645|consen 1437 GK--RPWAELDNEWAIMYHVA---AGHK-------------------------PQ----------IPE----RLSSEGRD 1472 (1509)
T ss_pred CC--CchhhccchhHHHhHHh---ccCC-------------------------CC----------Cch----hhhHhHHH
Confidence 43 344443321 2222221 1111 11 112 24788999
Q ss_pred HHHHHHhhcCcccccccchhhccccccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVDFEFV 478 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~ 478 (487)
++.+||..||+.||...+-+-|++-+....
T Consensus 1473 Fle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1473 FLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred HHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 999999999999999988887877665443
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-23 Score=206.84 Aligned_cols=276 Identities=19% Similarity=0.204 Sum_probs=176.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH--HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE--AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~--~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
--.|+|-|+.|.+|.+..-|..||||+++.+-.- .-..++.+|+.+. .. +
T Consensus 438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~---~A-------D------------------ 489 (752)
T KOG0670|consen 438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLN---DA-------D------------------ 489 (752)
T ss_pred eccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhh---cc-------C------------------
Confidence 3489999999999999888999999999866211 1122233333222 10 0
Q ss_pred HHH-HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC------CCHHHHHHHHHHHHHHHH
Q 011399 212 VQE-GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG------LKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 212 ~~E-a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~------~~~~~~~~~~i~~~l~~l 284 (487)
.| -.++.++...|... +..|||.|-+.- .|.++ +++.| +...+.+..|+..||..|
T Consensus 490 -~Edk~Hclrl~r~F~hk-------------nHLClVFE~Lsl-NLRev--LKKyG~nvGL~ikaVRsYaqQLflALklL 552 (752)
T KOG0670|consen 490 -PEDKFHCLRLFRHFKHK-------------NHLCLVFEPLSL-NLREV--LKKYGRNVGLHIKAVRSYAQQLFLALKLL 552 (752)
T ss_pred -chhhhHHHHHHHHhhhc-------------ceeEEEehhhhc-hHHHH--HHHhCcccceeehHHHHHHHHHHHHHHHH
Confidence 01 12455555555433 455799887632 45554 34333 456788899999999999
Q ss_pred HHCCccccCCCCCCeEEcCC-CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~-g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
-..||+|+||||.||||++. ..+||||||.|...++.. ++-.+.+.+|+.|+.+...- ++..+|+||+||+
T Consensus 553 K~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~-----yd~~iD~WSvgct 624 (752)
T KOG0670|consen 553 KKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLP-----YDYPIDTWSVGCT 624 (752)
T ss_pred HhcCeeecccCccceEeccCcceeeeccCcccccccccc---ccHHHHHHhccCcceeecCc-----ccCCccceeecee
Confidence 99999999999999999965 468999999999987764 34556677888888763322 3778999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHh--------------
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA-------------- 429 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~-------------- 429 (487)
|||++++-.-.|...-+ .+..+..+..-.+|.-+.. |+. .+ -..+|-+++++..
T Consensus 625 LYElYtGkIlFpG~TNN------~MLrl~me~KGk~p~KmlR--Kgq-F~---dqHFD~d~nf~~~e~D~vT~r~~~~vm 692 (752)
T KOG0670|consen 625 LYELYTGKILFPGRTNN------QMLRLFMELKGKFPNKMLR--KGQ-FK---DQHFDQDLNFLYIEVDKVTEREKRTVM 692 (752)
T ss_pred eEEeeccceecCCCCcH------HHHHHHHHhcCCCcHHHhh--hcc-hh---hhhcccccceEEEeccccccceeEEEe
Confidence 99999864433322111 2333444444445543211 111 00 1122333333221
Q ss_pred --HhH--HHHHHhcc-----C----CCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 430 --SYP--YFAKRLLT-----D----PNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 430 --~~p--~~~~~l~~-----~----~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+| -+...+.. + .-.+++++|.+||.-||.+|.+..+++.||||.
T Consensus 693 ~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~ 750 (752)
T KOG0670|consen 693 VNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFIT 750 (752)
T ss_pred cccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCccc
Confidence 122 01111111 1 123678999999999999999999999999985
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.7e-24 Score=204.38 Aligned_cols=229 Identities=17% Similarity=0.153 Sum_probs=166.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||.||||.|-+|..+.+.+.+|||+++.++.-+ ..|++.--...+.+. ...+.|-++++..-|+..
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLA--L~~kppFL~qlHScFQTm--------- 422 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLA--LPGKPPFLVQLHSCFQTM--------- 422 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhhee--cCCCCchHHHHHHHhhhh---------
Confidence 67999999999999999889999999998764321 123322111111111 112235566666655533
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHH-HHHhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQV-AIESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
.+.|.||||+.||+|.-.+ +..+..+..+-.++..|..+|-+||+.||+.|
T Consensus 423 ----------------------------DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYR 474 (683)
T KOG0696|consen 423 ----------------------------DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYR 474 (683)
T ss_pred ----------------------------hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeee
Confidence 5568999999999997543 34455567777888889999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|..|||++.+|.|||.|||+++.- +..+..++||+ |++++++++...-++..+|.|++|+.|+||+.
T Consensus 475 DLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGT--------PdYiAPEIi~YqPYgksvDWWa~GVLLyEmla- 545 (683)
T KOG0696|consen 475 DLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGT--------PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA- 545 (683)
T ss_pred eccccceEeccCCceEeeecccccccccCCcceeeecCC--------CcccccceEEecccccchhHHHHHHHHHHHHc-
Confidence 99999999999999999999999863 33344456655 66677777666656788999999999999997
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTV 412 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~ 412 (487)
...|+++.+-..+..++..--..+|-.++.+.+.+.+++++
T Consensus 546 -GQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~lt 586 (683)
T KOG0696|consen 546 -GQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLT 586 (683)
T ss_pred -CCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhh
Confidence 44678877766666666544444555666677777777754
|
|
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-23 Score=204.25 Aligned_cols=274 Identities=17% Similarity=0.148 Sum_probs=161.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChH-----HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE-----EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~-----~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|+||+|+++.+|+.||+|+...... +.+..++.+++ ...|+|++.+++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~----------~~~h~~i~~~~~--------- 67 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLK----------QLKHPNLVNLIE--------- 67 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHH----------hCCCCCEeeeee---------
Confidence 569999999999999998899999998753311 11111111111 111233222222
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
+.......++||||++|+.+..+.... .........+..++..++.++|+.
T Consensus 68 ----------------------------~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~ 119 (286)
T cd07847 68 ----------------------------VFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH 119 (286)
T ss_pred ----------------------------EEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 122235568999999998877653221 122233445567788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||.||+++.+|.++|+|||++..+...... .........+..||.+. .....+.+.|+||+|+.++++
T Consensus 120 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~----~~~~~~~~~Di~slG~i~~~l 194 (286)
T cd07847 120 NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD-YTDYVATRWYRAPELLV----GDTQYGPPVDVWAIGCVFAEL 194 (286)
T ss_pred CceecCCChhhEEEcCCCcEEECccccceecCCCccc-ccCcccccccCCHHHHh----CCCCcCchhhhHHHHHHHHHH
Confidence 9999999999999999999999999999877543210 00011122334455432 112346789999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+++. .++.+.+-......+...... ..++....... -....+ ...|...... + ........++...
T Consensus 195 ~~g~--~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~---~~~~~~~~~~---~--~~~~~~~~~~~~~ 260 (286)
T cd07847 195 LTGQ--PLWPGKSDVDQLYLIRKTLGD---LIPRHQQIFST-NQFFKG---LSIPEPETRE---P--LESKFPNISSPAL 260 (286)
T ss_pred HhCC--CCCCCCChHHHHHHHHHHhCC---CChHHhhhccc-cccccc---ccCCCccccc---C--HHHHhccCCHHHH
Confidence 9853 344433322222222221111 11111000000 000000 0011111100 1 1122335678999
Q ss_pred HHHHHHHhhcCcccccccchhhcccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.+.+||..||..|.+..+.+.|+||
T Consensus 261 ~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 261 SFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HHHHHHhcCCccccCCHHHHhcCCCC
Confidence 99999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=199.07 Aligned_cols=270 Identities=19% Similarity=0.216 Sum_probs=161.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChH-----HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE-----EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~-----~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
++||+|++|+||+|+.+.+|+.||||.++.... ..+..+++.++ ...|++++++.+.+..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~----------~l~h~~i~~~~~~~~~----- 70 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK----------ELNHPNIVKLLDVIHT----- 70 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHH----------hcCCCCCcchhhhccc-----
Confidence 679999999999999988999999998864321 11222222222 2347777776664321
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLL 285 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh 285 (487)
....++||||+.+ +|.+...... ...+. ...+..++..++.|+|
T Consensus 71 --------------------------------~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh 117 (284)
T cd07860 71 --------------------------------ENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH 117 (284)
T ss_pred --------------------------------CCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2456899999965 6665533221 22333 3344567888999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
..|++|+|++|+||+++.+|.++|+|||++..+....... ........+..||.. ......+...|+||+|+.++
T Consensus 118 ~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~----~~~~~~~~~~Dv~slG~il~ 192 (284)
T cd07860 118 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEIL----LGCKYYSTAVDIWSLGCIFA 192 (284)
T ss_pred HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc-ccccccccccCCeEE----ecCCCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999987654321110 000001112222221 11123356789999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChH-HHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAY-YALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~-~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
+++++.. ++...+.... +........ .|+. ........ .+.... .|..... . ........++
T Consensus 193 ~l~tg~~--p~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~-~~~~~~~-~-----~~~~~~~~~~ 255 (284)
T cd07860 193 EMVTRRA--LFPGDSEIDQ---LFRIFRTLG--TPDEVVWPGVTSL---PDYKPS-FPKWARQ-D-----FSKVVPPLDE 255 (284)
T ss_pred HHHHCCC--CCCCCCHHHH---HHHHHHHhC--CCChhhhhhhhHH---HHHHhh-ccccccc-C-----HHHHcccCCH
Confidence 9998543 3333222221 222221111 1111 10001111 100010 1111100 0 0111234678
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+++.+.+||..||.+|++..+.+.|+||
T Consensus 256 ~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 256 DGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 89999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-23 Score=200.91 Aligned_cols=253 Identities=14% Similarity=0.085 Sum_probs=156.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.||+|+.+....... ....+. ++.+
T Consensus 8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~--~~~~~~--------------------------------~~~~ 53 (263)
T cd06625 8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPE--TKKEVN--------------------------------ALEC 53 (263)
T ss_pred ceecCCCceEEEEEEEcCCCcEEEEEEEeecccchh--hHHHHH--------------------------------HHHH
Confidence 789999999999999988899999999864421110 000000 1222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.++ +++++.-..-+.......+++|||++|++|.+...... ........+..++..++.++|+.|++|+
T Consensus 54 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~ 128 (263)
T cd06625 54 EIQLLKNL-----QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHR 128 (263)
T ss_pred HHHHHHhC-----CCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 22222222 12333222222333456789999999999987643221 1223344556778889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH--HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI--IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+||+||+++.+|.++|+|||++..+........ ........+..||.+ .....+.+.|+||+|+.+++++++
T Consensus 129 dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~el~~g 203 (263)
T cd06625 129 DIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVI-----SGEGYGRKADVWSVGCTVVEMLTE 203 (263)
T ss_pred CCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCccee-----ccCCCCchhhhHHHHHHHHHHHhC
Confidence 9999999999999999999999886643221100 000011122233332 223356778999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+......... . ....+. +....++.+.+.+
T Consensus 204 ~--~p~~~~~~~~~~~~~~---~------------------------~~~~~~--------------~~~~~~~~~~~li 240 (263)
T cd06625 204 K--PPWAEFEAMAAIFKIA---T------------------------QPTNPQ--------------LPSHVSPDARNFL 240 (263)
T ss_pred C--CCccccchHHHHHHHh---c------------------------cCCCCC--------------CCccCCHHHHHHH
Confidence 3 2332222111110000 0 000000 1123466778899
Q ss_pred HHHHhhcCcccccccchhhcccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+||.++|..|.+..+.+.|+||
T Consensus 241 ~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 241 RRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHhhcCcccCCCHHHHhhCCCC
Confidence 99999999999999999999887
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-23 Score=199.75 Aligned_cols=258 Identities=14% Similarity=0.088 Sum_probs=154.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|... +|+.+|||.++......... ...... +..
T Consensus 6 ~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~---------------------------~~~~~~------~~~ 51 (265)
T cd06631 6 EVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAA---------------------------EKEYEK------LQE 51 (265)
T ss_pred ceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhH---------------------------HHHHHH------HHH
Confidence 67999999999999876 89999999886432111000 000011 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|+..+.++. ++++.-..-+.......+++|||++|++|.++.... ....+....+..++..++.++|..|++|+
T Consensus 52 e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 126 (265)
T cd06631 52 EVDLLKSLK-----HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHR 126 (265)
T ss_pred HHHHHHhcC-----CCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 222222221 122211111222335678999999999998875432 12233334456788889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|++|+||+++++|.++|+|||++..+...... ...... ....+....++++.......+++.|+||+|+.+++++++.
T Consensus 127 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~ 205 (265)
T cd06631 127 DIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNML-KSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 205 (265)
T ss_pred CcCHHhEEECCCCeEEeccchhhHhhhhccccccccccc-cccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999999998765321000 000000 0011222233334433344577899999999999999853
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
. |+...+.......+.. .....|.. ....++.+++.++
T Consensus 206 ~--p~~~~~~~~~~~~~~~--------------------------~~~~~~~~--------------~~~~~~~~~~~i~ 243 (265)
T cd06631 206 P--PLASMDRLAAMFYIGA--------------------------HRGLMPRL--------------PDSFSAAAIDFVT 243 (265)
T ss_pred C--ccccCChHHHHHHhhh--------------------------ccCCCCCC--------------CCCCCHHHHHHHH
Confidence 2 3332221111100000 00001111 1234677888999
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+||.++|..|.+..+-+.|+||
T Consensus 244 ~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 244 SCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHhcCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999986
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-23 Score=203.07 Aligned_cols=249 Identities=17% Similarity=0.136 Sum_probs=151.8
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||+|+||.||+|..+.+|+.||+|+.......... .+..+..|.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~~~e~ 44 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRK------------------------------------GEQMALNEK 44 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhh------------------------------------hhHHHHHHH
Confidence 68999999999999889999999998643211100 000112222
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHH--HHHHHHHHHHHHHHHCCcccc
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLD--LVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~--~~~~~i~~~l~~lh~~givH~ 292 (487)
..+.++. ++.+.-..-+.......++||||++|++|.+...... ....... .+..++..++.++|..|++|+
T Consensus 45 ~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~ 119 (277)
T cd05577 45 KILEKVS-----SRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYR 119 (277)
T ss_pred HHHHhCC-----CCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 2222221 2222211112223456789999999999987654322 1344433 345678889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|++|.||+++.++.++|+|||++..+...... ........+..|+ ....+..+...|+||+|+.+++++++.
T Consensus 120 di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~y~~PE-----~~~~~~~~~~~Di~slG~il~~l~~g~- 191 (277)
T cd05577 120 DLKPENVLLDDHGNVRISDLGLAVELKGGKKI--KGRAGTPGYMAPE-----VLQGEVYDFSVDWFALGCTLYEMIAGR- 191 (277)
T ss_pred CCCHHHEEECCCCCEEEccCcchhhhccCCcc--ccccCCCCcCCHH-----HhcCCCCCchhhhHHHHHHHHHHhhCC-
Confidence 99999999999999999999998765432110 0011111222333 333344577899999999999998743
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.++...+.......+.... ....+. .....++.+++.+.+
T Consensus 192 -~p~~~~~~~~~~~~~~~~~-------------------------~~~~~~--------------~~~~~~~~~~~li~~ 231 (277)
T cd05577 192 -SPFRQRKEKVEKEELKRRT-------------------------LEMAVE--------------YPDKFSPEAKDLCEA 231 (277)
T ss_pred -CCCCCCcccccHHHHHhcc-------------------------cccccc--------------CCccCCHHHHHHHHH
Confidence 2332221100000000000 000000 112347888999999
Q ss_pred HHhhcCcccc-----cccchhhcccc
Q 011399 453 LLFKDGRFRH-----VLYSPFTINLV 473 (487)
Q Consensus 453 ~L~~d~~~r~-----~~~~~~~~~~~ 473 (487)
||..||..|. +..+.+.|+||
T Consensus 232 ~l~~~p~~R~~~~~~~~~~ll~h~~~ 257 (277)
T cd05577 232 LLQKDPEKRLGCRGGSADEVREHPLF 257 (277)
T ss_pred HccCChhHccCCCcccHHHHHhChhh
Confidence 9999999999 55568889998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-23 Score=202.05 Aligned_cols=254 Identities=16% Similarity=0.156 Sum_probs=156.6
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+++.|+.+ +.||+|++|+||+|.+..+|+.||||+........ .. .
T Consensus 2 ~~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~---~~-----------------------------~ 47 (277)
T cd06640 2 PEELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED---EI-----------------------------E 47 (277)
T ss_pred hHHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH---HH-----------------------------H
Confidence 34556666 67999999999999998789999999886331110 00 0
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSL 281 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l 281 (487)
++..|...+.++ +++. ++.++. ......++||||++|++|.+..............+..++..++
T Consensus 48 ------~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l 114 (277)
T cd06640 48 ------DIQQEITVLSQC-----DSPY--VTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGL 114 (277)
T ss_pred ------HHHHHHHHHHhC-----CCCC--EeeEEEEEEECCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 122222222211 1222 222222 2245679999999999998874432222223334456778899
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
.++|..|++|+|++|+||+++.++.++++|||++..+....... . ...+....++++....+..+.+.|+||+|
T Consensus 115 ~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~-~-----~~~~~~~y~apE~~~~~~~~~~~Dv~slG 188 (277)
T cd06640 115 DYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-N-----TFVGTPFWMAPEVIQQSAYDSKADIWSLG 188 (277)
T ss_pred HHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc-c-----cccCcccccCHhHhccCCCccHHHHHHHH
Confidence 99999999999999999999999999999999997765432110 0 00111122333333344567889999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
+.+++++++. .++...+.......+ ... ..|.. ...
T Consensus 189 ~il~el~tg~--~p~~~~~~~~~~~~~-------~~~---------------------~~~~~--------------~~~ 224 (277)
T cd06640 189 ITAIELAKGE--PPNSDMHPMRVLFLI-------PKN---------------------NPPTL--------------TGE 224 (277)
T ss_pred HHHHHHHHCC--CCCCCcChHhHhhhh-------hcC---------------------CCCCC--------------chh
Confidence 9999999743 233322211111000 000 00110 001
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.++...+.+.+||.++|..|++..+.+.|+||.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06640 225 FSKPFKEFIDACLNKDPSFRPTAKELLKHKFIV 257 (277)
T ss_pred hhHHHHHHHHHHcccCcccCcCHHHHHhChHhh
Confidence 234566788888888888888888888888873
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-23 Score=200.33 Aligned_cols=260 Identities=15% Similarity=0.100 Sum_probs=155.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||+|++|+||+|....+++.||+|........... ......+.+.+ ..
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~------------------------~~~~~~~~~~~------~~ 55 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASS------------------------KDRKRSMLDAL------AR 55 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccch------------------------hHHHHHHHHHH------HH
Confidence 5799999999999999878999999988643211000 00001111121 22
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ +++. +.+.. +.......+++|||++|++|.++.... .........+..++..++.++|+.|++|
T Consensus 56 e~~~l~~l-----~h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH 129 (267)
T cd06628 56 EIALLKEL-----QHENIVQYLG-SSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIH 129 (267)
T ss_pred HHHHHHhc-----CCCCeeeEEE-EEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 22222222 1222 11111 122345678999999999998775332 1222333455678888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|++|.||++++++.++|+|||+++.+.................+....++++....+..+...|+|++|+.+++++++.
T Consensus 130 ~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~ 209 (267)
T cd06628 130 RDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209 (267)
T ss_pred ccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCC
Confidence 99999999999999999999999987753210000000000001112223333334445577899999999999999743
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.|+...+....+..+. ....|.+ ....+...++.++
T Consensus 210 --~p~~~~~~~~~~~~~~----------------------------~~~~~~~--------------~~~~~~~~~~li~ 245 (267)
T cd06628 210 --HPFPDCTQLQAIFKIG----------------------------ENASPEI--------------PSNISSEAIDFLE 245 (267)
T ss_pred --CCCCCccHHHHHHHHh----------------------------ccCCCcC--------------CcccCHHHHHHHH
Confidence 3333222111000000 0111111 1134567788999
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+||..||..|.+..+.+.|+||
T Consensus 246 ~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 246 KTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHccCCchhCcCHHHHhhCCCC
Confidence 9999999999999888888886
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-22 Score=202.07 Aligned_cols=284 Identities=19% Similarity=0.191 Sum_probs=166.5
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|... ++||+|+||.||+|.+..+|+.||||++......... .....+ .++.+....|++++.+.+.+...
T Consensus 19 y~~~--~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~----Ei~~l~~l~h~~iv~~~~~~~~~--- 88 (345)
T cd07877 19 YQNL--SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYR----ELRLLKHMKHENVIGLLDVFTPA--- 88 (345)
T ss_pred eEEE--EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH-HHHHHH----HHHHHHHcCCCcccceeeeeeec---
Confidence 5544 7899999999999998889999999998754221110 001111 11112223356655554432110
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
.........+++++++ |++|.++........+....+..++..|+.|+|+.
T Consensus 89 ----------------------------~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 139 (345)
T cd07877 89 ----------------------------RSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 139 (345)
T ss_pred ----------------------------ccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0011123457888887 66777664333333344455567888899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.+|.++|+|||++........ ....+..+..|+.+. .....+.+.|+||+|+.++++
T Consensus 140 ~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~y~aPE~~~----~~~~~~~~~DvwslG~il~el 211 (345)
T cd07877 140 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----GYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAEL 211 (345)
T ss_pred CeeecCCChHHEEEcCCCCEEEeccccccccccccc----ccccCCCccCHHHHh----CccCCCchhhHHHHHHHHHHH
Confidence 999999999999999999999999999887543311 111122233444432 112346789999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhh--CCCCChHHhHhHHHHHHhccCCCHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYA--DPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~l--dP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++.. ++...+.......+. .... ..++.+....... ..+.....+ .|..+ + . ......++.
T Consensus 212 ~~g~~--pf~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~-~-~~~~~~~~~ 275 (345)
T cd07877 212 LTGRT--LFPGTDHIDQLKLIL---RLVG-TPGAELLKKISSE-SARNYIQSLTQMPKMN-------F-A-NVFIGANPL 275 (345)
T ss_pred HhCCC--CCCCCCHHHHHHHHH---HHhC-CCCHHHHhhcccH-hHHHHHHHhcccCCcc-------h-h-hhcCCCCHH
Confidence 98543 333222222222221 1111 1122211100000 000000000 01111 1 1 112245788
Q ss_pred HHHHHHHHHhhcCcccccccchhhccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.++.+.+||..||..|++..+.+.|+||.
T Consensus 276 ~~~li~~~L~~dp~~R~t~~e~l~h~~f~ 304 (345)
T cd07877 276 AVDLLEKMLVLDSDKRITAAQALAHAYFA 304 (345)
T ss_pred HHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence 99999999999999999999999999995
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=203.74 Aligned_cols=259 Identities=18% Similarity=0.195 Sum_probs=167.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+-+.||++... +.+.||+|.+.-.. .|-+ .... |++
T Consensus 367 k~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~-----~D~q--------------------------tl~g------y~n 408 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNS-DKQIYALKKVVLLE-----ADNQ--------------------------TLDG------YRN 408 (677)
T ss_pred HhhcCCCcceeeeeecC-CCcchhhhHHHHhh-----cCHH--------------------------HHHH------HHH
Confidence 67999999999999876 67788888653211 1111 1112 344
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec--CCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
|..-+.+++.. ..|-++|+. ..+..||||||=+- +|..++........ ..+.+..+++.++.++|.+||
T Consensus 409 EI~lL~KLkg~------~~IIqL~DYEv~d~~lYmvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gI 481 (677)
T KOG0596|consen 409 EIALLNKLKGH------DKIIQLYDYEVTDGYLYMVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGI 481 (677)
T ss_pred HHHHHHHhcCC------ceEEEEeeeeccCceEEEEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhce
Confidence 44444444322 233344332 23557899998654 78777544333222 567778899999999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH----HHHHHHHHHHHhcCHHHHHHHHHH-cC-----CCCCCCCcch
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR----FAIIGHVVHMVNRDYEAMARDYYA-LD-----FLSPDVDVTP 359 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~g-----~~~~~~Di~s 359 (487)
||.||||.|+|+ -.|.+||||||+|..+.+++. ..-+|++.+| .||.+..--.. -+ -++++.|+||
T Consensus 482 VHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYM---sPEAl~~~~s~~~~~~~k~Ki~r~SDvWS 557 (677)
T KOG0596|consen 482 VHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYM---SPEALTDMSSSRENGKSKIKISRKSDVWS 557 (677)
T ss_pred eecCCCcccEEE-EeeeEEeeeechhcccCccccceeeccccCccccc---CHHHHhhccccccCCCcceeecCccchhh
Confidence 999999999998 579999999999999877643 3345554444 46655332111 11 1577889999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+||.||+|+-+ ..|+. ++...+.++ ....||+..+- .|.+
T Consensus 558 LGCILYqMvYg--ktPf~-----~~~n~~aKl-------------------------~aI~~P~~~Ie---fp~~----- 597 (677)
T KOG0596|consen 558 LGCILYQMVYG--KTPFG-----QIINQIAKL-------------------------HAITDPNHEIE---FPDI----- 597 (677)
T ss_pred hhhHHHHHHhc--CCchH-----HHHHHHHHH-------------------------HhhcCCCcccc---ccCC-----
Confidence 99999988742 23332 222111111 12245644321 1111
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccccccccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCDI 482 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~ 482 (487)
..+.++-+.++.||..||++||+--+-+.|+|...-+++...
T Consensus 598 -~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~~~~ 639 (677)
T KOG0596|consen 598 -PENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIPVEQ 639 (677)
T ss_pred -CCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccccchH
Confidence 122337889999999999999999999999999887766554
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-23 Score=204.36 Aligned_cols=257 Identities=16% Similarity=0.121 Sum_probs=156.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.||+|...+..... ....+.+....+.+....|++++.+++.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~------------- 69 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK----RNKVKRVLTEQEILATLDHPFLPTLYAS------------- 69 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccch----HHHHHHHHHHHHHHHhCCCCCchhheee-------------
Confidence 67999999999999998789999999987542111 0001111111111111123333333221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
.......+++|||+.|++|.++..... ...+. ...+..++..++.|+|..|++
T Consensus 70 ------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 125 (316)
T cd05574 70 ------------------------FQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125 (316)
T ss_pred ------------------------eecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 122355689999999999988754321 22333 334457788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH--HH---------------------HHHHhcCHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG--HV---------------------VHMVNRDYEAMARDYYA 347 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~--~~---------------------~~~~~~~~~~~~~~~~~ 347 (487)
|+|+||.||+++.+|.++|+|||++............. .. .....+....++++...
T Consensus 126 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 205 (316)
T cd05574 126 YRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS 205 (316)
T ss_pred ccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc
Confidence 99999999999999999999999987654321100000 00 00000112223333333
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChH
Q 011399 348 LDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (487)
Q Consensus 348 ~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (487)
.+..+.+.|+||+|+.+++++.+. .++...+.......+ .. -++.+..
T Consensus 206 ~~~~~~~~Di~slG~ll~~l~~g~--~pf~~~~~~~~~~~~---~~--------------------------~~~~~~~- 253 (316)
T cd05574 206 GDGHGSAVDWWTLGILLYEMLYGT--TPFKGSNRDETFSNI---LK--------------------------KEVTFPG- 253 (316)
T ss_pred CCCCCchHHHHHHHHHHHHHhhCC--CCCCCCchHHHHHHH---hc--------------------------CCccCCC-
Confidence 444577889999999999998743 233333221111100 00 0000000
Q ss_pred HhHhHHHHHHhccCCCHHHHHHHHHHHhhcCccccc----ccchhhccccc
Q 011399 428 AASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHV----LYSPFTINLVD 474 (487)
Q Consensus 428 ~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~----~~~~~~~~~~~ 474 (487)
....++.+++.+.+||.+||..|++ ..+.+.|+||.
T Consensus 254 -----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~ 293 (316)
T cd05574 254 -----------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293 (316)
T ss_pred -----------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhh
Confidence 0014678888999999999999999 88888999984
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-24 Score=224.77 Aligned_cols=219 Identities=15% Similarity=0.109 Sum_probs=125.8
Q ss_pred CCCCceEEEeecCCCCcCcHHHHHhcC------CCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecC
Q 011399 240 YTSGKVLTMEWVEGVKLNEQVAIESQG------LKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFG 313 (487)
Q Consensus 240 ~~~~~~LvmE~~~G~~L~~~~~~~~~~------~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFG 313 (487)
.....+++||++.+ ++.+........ ......+..++..+|.|||++||+||||||+|||++.+|.++|+|||
T Consensus 234 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFG 312 (501)
T PHA03210 234 SEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFG 312 (501)
T ss_pred ECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCC
Confidence 34567899999865 443332211111 11233456788899999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccC-CCCcCc-HHHHHHHHHHH
Q 011399 314 MMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNS-SVSELN-FKTIVDGLGAV 391 (487)
Q Consensus 314 la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~-~~~~~~-~~~~~~~l~~~ 391 (487)
++..+.........+...+..+..||.+ ..+-.+..+|+||+|+.+++++++-+.. .....+ ...+. .+...
T Consensus 313 la~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~-~~~~~ 386 (501)
T PHA03210 313 TAMPFEKEREAFDYGWVGTVATNSPEIL-----AGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL-KIIDS 386 (501)
T ss_pred CceecCcccccccccccCCcCCCCchhh-----cCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH-HHHHh
Confidence 9987754321111111122333444433 3334577899999999999999743211 111111 12221 11111
Q ss_pred HhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcc
Q 011399 392 LYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTIN 471 (487)
Q Consensus 392 ~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~ 471 (487)
+.......|.....+..-+ ........| ....+.+ +.+ ..++.+.+.+.+||..||++|.+..+.+.|+
T Consensus 387 ~~~~~~~~p~~~~~~~~~i---~~~~~~~~~-----~~~~~~~-~~~--~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp 455 (501)
T PHA03210 387 LSVCDEEFPDPPCKLFDYI---DSAEIDHAG-----HSVPPLI-RNL--GLPADFEYPLVKMLTFDWHLRPGAAELLALP 455 (501)
T ss_pred cccChhhcCCcHHHHHHHh---hhhhcccCc-----cchhhHH-Hhc--CCChHHHHHHHHHhccCcccCcCHHHHhhCh
Confidence 1111112232211111111 111100001 0111121 111 2456788889999999999999999999999
Q ss_pred ccccc
Q 011399 472 LVDFE 476 (487)
Q Consensus 472 ~~~~~ 476 (487)
||.-.
T Consensus 456 ~f~~~ 460 (501)
T PHA03210 456 LFSAE 460 (501)
T ss_pred hhhcC
Confidence 99643
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-23 Score=199.12 Aligned_cols=189 Identities=20% Similarity=0.208 Sum_probs=122.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||+|+.+........ .. +.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~--------------------------------~~------~~~ 42 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK--------------------------------AK------FLQ 42 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHH--------------------------------HH------HHH
Confidence 3699999999999999889999999987643221110 01 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH 291 (487)
|.+.+.++ +++++.-..-+.......++||||++|++|.++........+.. ..+..++..++.|+|..|++|
T Consensus 43 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 117 (252)
T cd05084 43 EARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIH 117 (252)
T ss_pred HHHHHHhC-----CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 22111111 12222111112233456789999999999988754332233433 345577888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+||+||+++.++.++|+|||++............ .........++++....+..+.+.|+||+|+.++++++
T Consensus 118 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~ 191 (252)
T cd05084 118 RDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG----GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFS 191 (252)
T ss_pred cccchheEEEcCCCcEEECccccCcccccccccccC----CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998865432111000 00011122344444445556778899999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-23 Score=203.05 Aligned_cols=273 Identities=19% Similarity=0.173 Sum_probs=163.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChH-----HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE-----EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~-----~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|.+..+|+.||||+.+.... ..+..++++++ ...|+++..+++.+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~----------~l~~~~i~~~~~~~------- 69 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLR----------QLRHENIVNLKEAF------- 69 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHH----------hcCCCCeeehhheE-------
Confidence 679999999999999998899999998864311 11111111111 11244444433321
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (487)
. .....+++|||++++.+..... ...+.+ ....+..++..++.++|.
T Consensus 70 -----------------------------~-~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~ 118 (288)
T cd07833 70 -----------------------------R-RKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHS 118 (288)
T ss_pred -----------------------------E-ECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 1345689999999877665422 122233 334456778889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~ 365 (487)
.|++|+|++|+||+++.+|.++|+|||++..+................+..||.+ ... ..+.+.|+||+|+.++
T Consensus 119 ~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~-----~~~~~~~~~~Dv~slG~~l~ 193 (288)
T cd07833 119 HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELL-----VGDTNYGKPVDVWAIGCIMA 193 (288)
T ss_pred CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchh-----cCCCCcCchhhHHHHHHHHH
Confidence 9999999999999999999999999999887755432111111111223333332 223 4467899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHH-HHHHhccCCCH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPY-FAKRLLTDPNP 444 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~-~~~~l~~~~~p 444 (487)
+++++. .++...+.....+.+.... ...++.......+-....+. .+ |.. ..+. .........++
T Consensus 194 ~l~~g~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~-~~~-----~~~~~~~~~~~~~~~~ 259 (288)
T cd07833 194 ELLDGE--PLFPGDSDIDQLYLIQKCL----GPLPPSHQELFSSNPRFAGV--AF-PEP-----SQPESLERRYPGKVSS 259 (288)
T ss_pred HHHhCC--CCCCCCCHHHHHHHHHHHh----CCCCHHHhhhcccCcccccc--cc-CCC-----CCcHHHHHhcCCccch
Confidence 999753 2333333222232322221 12333221111110000000 00 000 0011 11222223478
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+++.+.+||..+|..|++..+.+.|+||
T Consensus 260 ~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 260 PALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred HHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 99999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-23 Score=200.45 Aligned_cols=255 Identities=18% Similarity=0.168 Sum_probs=158.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|.+..+++.||+|+.+........ ++..
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~---------------------------------------~~~~ 51 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELE---------------------------------------DFMV 51 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHH---------------------------------------HHHH
Confidence 5699999999999999878999999998754222110 0122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc--CCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--GLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|+..+.++ . ++.+.-..-+.......++||||++|++|.++...... ..+....+..++..++.|+|+.|++|
T Consensus 52 e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h 126 (280)
T cd06611 52 EIDILSEC----K-HPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIH 126 (280)
T ss_pred HHHHHHhC----C-CCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 22222211 1 12211111112223556899999999999887543222 23344555678888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||.||+++.+|.++|+|||++.......... ........+..|+.+..........+.+.|+||+|+.+++++++.
T Consensus 127 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~ 205 (280)
T cd06611 127 RDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR-DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME 205 (280)
T ss_pred CCCChhhEEECCCCCEEEccCccchhhccccccc-ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCC
Confidence 9999999999999999999999887653321110 011112223445544322222233466899999999999998743
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+.......+ .. ...|.+.. ....++.+.+.+.
T Consensus 206 --~p~~~~~~~~~~~~~---~~-------------------------~~~~~~~~------------~~~~~~~~~~li~ 243 (280)
T cd06611 206 --PPHHELNPMRVLLKI---LK-------------------------SEPPTLDQ------------PSKWSSSFNDFLK 243 (280)
T ss_pred --CCcccCCHHHHHHHH---hc-------------------------CCCCCcCC------------cccCCHHHHHHHH
Confidence 333333221111111 00 00011100 0123456778899
Q ss_pred HHHhhcCcccccccchhhcccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+||..||..|.+..+.+.|+||.-
T Consensus 244 ~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 244 SCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred HHhccChhhCcCHHHHhcChhhcc
Confidence 999999999999999999999854
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-23 Score=209.49 Aligned_cols=295 Identities=17% Similarity=0.118 Sum_probs=164.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.++.+|+.||||+.+.......... ..+.+.+ ...+..+.+
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~---------------------~~~~~~~----~~~~~~~~~ 69 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK---------------------DRQLVGM----CGIHFTTLR 69 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc---------------------chhhhcc----cccchhHHH
Confidence 569999999999999988999999999864321110000 0000000 000011222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.++. ++++.-..-+.......+++|||++| +|.+..... .........+..++..++.++|..|++|+
T Consensus 70 E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~ 143 (335)
T PTZ00024 70 ELKIMNEIK-----HENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHR 143 (335)
T ss_pred HHHHHHhCC-----CcceeeeeEEEecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 333222221 12221111112233567899999986 666553221 12333444566788889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHH-------------HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEA-------------RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
|++|+||+++.+|.++|+|||++....... +...........+..||.+. .....+.+.|+||
T Consensus 144 dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~Dv~s 219 (335)
T PTZ00024 144 DLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLM----GAEKYHFAVDMWS 219 (335)
T ss_pred cccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcc----cCCCCCcHHHHHH
Confidence 999999999999999999999987664110 00000001111222333221 1123466789999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCC-CCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYP-FNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
+|+.+++++++. .++...+-......+........ ...|... -.|.+.......|.-....
T Consensus 220 lG~~l~el~tg~--~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 281 (335)
T PTZ00024 220 VGCIFAELLTGK--PLFPGENEIDQLGRIFELLGTPNEDNWPQAK----------------KLPLYTEFTPRKPKDLKTI 281 (335)
T ss_pred HHHHHHHHHhCC--CCCCCCCHHHHHHHHHHHhCCCchhhCcchh----------------hcccccccCcCCcccHHHh
Confidence 999999999843 33333332222222211111000 0011000 0011100001111111122
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCD 481 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~ 481 (487)
....++.+++.+.+||..||..|++..+.+.|+||.-...+++
T Consensus 282 ~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~~ 324 (335)
T PTZ00024 282 FPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPCD 324 (335)
T ss_pred CcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCCC
Confidence 3345788999999999999999999999999999976665554
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.7e-23 Score=209.41 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+..++..++.|+|+.|++|||+||.|||++.++.++|+|||++..+.........+. ....+..++++....+..+
T Consensus 219 ~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~ 294 (375)
T cd05104 219 FSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGN----ARLPVKWMAPESIFNCVYT 294 (375)
T ss_pred HHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCC----CCCCcceeChhHhcCCCCC
Confidence 346788899999999999999999999999999999999999987654321111111 0011123334444455568
Q ss_pred CCCCcchHHHHHHHHHH
Q 011399 353 PDVDVTPIVPALRNFFD 369 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~ 369 (487)
.+.|+||+|+.++++++
T Consensus 295 ~~sDi~slG~~l~ellt 311 (375)
T cd05104 295 FESDVWSYGILLWEIFS 311 (375)
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 89999999999999986
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=200.77 Aligned_cols=255 Identities=17% Similarity=0.162 Sum_probs=158.8
Q ss_pred hhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 127 ~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
.|... +.||.|++|.||+|....+|+.||+|........... ...+.+ ..+....|++++.+++.
T Consensus 20 ~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~---~~~~e~----~~l~~l~h~~iv~~~~~------ 84 (296)
T cd06655 20 KYTRY--EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKE---LIINEI----LVMKELKNPNIVNFLDS------ 84 (296)
T ss_pred eEEEE--EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHH---HHHHHH----HHHHhcCCCceeeeeee------
Confidence 35555 6799999999999999889999999988532111100 000000 00111123333333321
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
.......++||||++|++|.++........+....+..++..++.++|+
T Consensus 85 -------------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~ 133 (296)
T cd06655 85 -------------------------------FLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHA 133 (296)
T ss_pred -------------------------------EecCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1123567899999999999887543333334444555678889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|+|+||.||+++.+|.++|+|||++..+....... . ...+.+..++++....+..+.+.|+||+|+.+++
T Consensus 134 ~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~-~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ 207 (296)
T cd06655 134 NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR-S-----TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (296)
T ss_pred CCcccCCCCHHHEEECCCCCEEEccCccchhcccccccC-C-----CcCCCccccCcchhcCCCCCchhhHHHHHHHHHH
Confidence 999999999999999999999999999988765432110 0 0011122223333333445778999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++. .++...+.......+. . . . .|... .....++..
T Consensus 208 lltg~--~pf~~~~~~~~~~~~~---~-~--~----------------------~~~~~------------~~~~~~~~~ 245 (296)
T cd06655 208 MVEGE--PPYLNENPLRALYLIA---T-N--G----------------------TPELQ------------NPEKLSPIF 245 (296)
T ss_pred HHhCC--CCCCCCCHHHHHHHHH---h-c--C----------------------CcccC------------CcccCCHHH
Confidence 99843 2333222111110000 0 0 0 00000 011346778
Q ss_pred HHHHHHHHhhcCcccccccchhhcccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
++.+.+||..||..|.+..+-+.|+||..
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 88899999999999999999999999953
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=196.28 Aligned_cols=257 Identities=15% Similarity=0.136 Sum_probs=158.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.||+|+.+...... ..+.+..+.+...+..+....|++++.+++.+.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----------- 73 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTS-SEQEEVVEALRKEIRLMARLNHPHIIRMLGATC----------- 73 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCc-hhHHHHHHHHHHHHHHHHHcCCCceehhhceec-----------
Confidence 67999999999999998899999999986432111 011111111221222222223555555444321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
.....+++|||++|++|.++.... ...+ ....+..++..++.++|+.|++|
T Consensus 74 --------------------------~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i~H 126 (268)
T cd06630 74 --------------------------EDSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQIIH 126 (268)
T ss_pred --------------------------cCCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 124567999999999998875432 2233 33344578889999999999999
Q ss_pred cCCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHH--HHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 292 ADPHPGNLLATPEG-KLAFLDFGMMSETPEEARF--AIIG-HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 292 ~Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
+|++|+||+++.+| .++|+|||++..+...... ...+ ...+..+..|| .......+...|+|++|+.++++
T Consensus 127 ~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE-----~~~~~~~~~~~Dv~slG~~l~~l 201 (268)
T cd06630 127 RDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPE-----VLRGEQYGRSCDVWSVGCVIIEM 201 (268)
T ss_pred CCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHh-----HhccCCCCcccchHHHHHHHHHH
Confidence 99999999998776 5999999999877543110 0000 01112223333 33334457789999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+++.. ++...+....... ..+.. .....|.+. ...++.++
T Consensus 202 ~~g~~--p~~~~~~~~~~~~------------------~~~~~------~~~~~~~~~--------------~~~~~~~~ 241 (268)
T cd06630 202 ATAKP--PWNAEKHSNHLAL------------------IFKIA------SATTAPSIP--------------EHLSPGLR 241 (268)
T ss_pred HhCCC--CCCCCCCcchHHH------------------HHHHh------ccCCCCCCc--------------hhhCHHHH
Confidence 87432 3221111000000 00000 000011110 12467788
Q ss_pred HHHHHHHhhcCcccccccchhhccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+.+.+||..+|..|.+..+-+.|+||.
T Consensus 242 ~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 242 DVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 899999999999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-23 Score=202.72 Aligned_cols=257 Identities=16% Similarity=0.145 Sum_probs=168.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||.|+||.||-++-+.||+-+|.|.+.+...+. -..|.--++
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKk------------------------------------r~ge~maLn 234 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKK------------------------------------RKGETMALN 234 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHH------------------------------------hhhhHHhhH
Confidence 77999999999999999999999999874221100 000111123
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHH-HHhcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA-IESQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~--~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+++...- .|.--..-.+.....+|||..|.||+|.-.+. ....+++ ....++.+|.++|++||+.+|+
T Consensus 235 Ek~iL~kV~s~-----FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iV 309 (591)
T KOG0986|consen 235 EKQILEKVSSP-----FIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIV 309 (591)
T ss_pred HHHHHHHhccC-----cEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhccee
Confidence 33333433222 22222222344567899999999999975432 2323444 4557778899999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
.||+||+|||+|+.|++.|+|.|+|..+++...-.- .|+.. .|++++..-+.++...|.|++||.+|+|+.
T Consensus 310 YRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~G--------YMAPEvl~ne~Y~~s~Dwf~lGCllYemi~ 381 (591)
T KOG0986|consen 310 YRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVG--------YMAPEVLQNEVYDFSPDWFSLGCLLYEMIA 381 (591)
T ss_pred eccCChhheeeccCCCeEeeccceEEecCCCCccccccCccc--------ccCHHHHcCCcccCCccHHHHHhHHHHHHc
Confidence 999999999999999999999999999987643221 44433 345555566666889999999999999997
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+- .|+....-+.=-+++-....+.+. ......|+++++.
T Consensus 382 G~--sPFr~~KeKvk~eEvdrr~~~~~~---------------------------------------ey~~kFS~eaksl 420 (591)
T KOG0986|consen 382 GH--SPFRQRKEKVKREEVDRRTLEDPE---------------------------------------EYSDKFSEEAKSL 420 (591)
T ss_pred cc--CchhhhhhhhhHHHHHHHHhcchh---------------------------------------hcccccCHHHHHH
Confidence 42 344333222111122211111111 1113568888999
Q ss_pred HHHHHhhcCcccccc-----cchhhcccc-ccccccc
Q 011399 450 LVELLFKDGRFRHVL-----YSPFTINLV-DFEFVVC 480 (487)
Q Consensus 450 l~~~L~~d~~~r~~~-----~~~~~~~~~-~~~~~~~ 480 (487)
++.+|.+||++|..- .+--.||+| ++++-.+
T Consensus 421 c~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rl 457 (591)
T KOG0986|consen 421 CEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRL 457 (591)
T ss_pred HHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHH
Confidence 999999999888763 355578888 4444333
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-23 Score=213.36 Aligned_cols=228 Identities=17% Similarity=0.190 Sum_probs=167.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||+|.||.|.+|++..+|..||||++... ..+...++.+.+.++.+..+.|||+++++..+...
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt-----~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~--------- 127 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKT-----QLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE--------- 127 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhc-----ccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec---------
Confidence 6799999999999999999999999998755 23333444455555555566799988888765422
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
...|+||||+.||.+.++...+ .......+....++..+++|||.++|+||
T Consensus 128 ----------------------------~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHr 179 (596)
T KOG0586|consen 128 ----------------------------ATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHR 179 (596)
T ss_pred ----------------------------ceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceecc
Confidence 5568999999999999884432 12234456667889999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH-HHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDY-YALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|||.+|||++.+..+||+|||++..++... ....+.+.+...++++ ....+..+++|+|++|..++.++.+.
T Consensus 180 dLk~eNilL~~~mnikIaDfgfS~~~~~~~-------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~Gs 252 (596)
T KOG0586|consen 180 DLKAENILLDENMNIKIADFGFSTFFDYGL-------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGS 252 (596)
T ss_pred ccchhhcccccccceeeeccccceeecccc-------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecc
Confidence 999999999999999999999999887542 1122344455555444 34568899999999999999988855
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTV 412 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~ 412 (487)
+ |+++-+.+.+-......-+..++-+..+...+++.++.
T Consensus 253 L--PFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lv 291 (596)
T KOG0586|consen 253 L--PFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLV 291 (596)
T ss_pred c--ccCCcccccccchheeeeecccceeechhHHHHHHhhc
Confidence 4 55555554444444333445566666677777776644
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-23 Score=192.92 Aligned_cols=278 Identities=16% Similarity=0.131 Sum_probs=175.3
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecC--C-hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRP--G-IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p--~-~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
++++|.-- .+.+|+|++|.|-.+..-.+|.++|||++.+ + .+..+-++++++..- ..|+||.++++-
T Consensus 75 F~d~YkLt-~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C---------qgh~nilqLief 144 (463)
T KOG0607|consen 75 FEDMYKLT-SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC---------QGHKNILQLIEF 144 (463)
T ss_pred HHHHHHhH-HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh---------cCCccHHHHHHH
Confidence 45555433 3679999999999999888999999999853 2 222232333222211 247888888886
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQC 279 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~ 279 (487)
|++. +..|||||-|.||+|...+.. ...++.....+...|.+
T Consensus 145 FEdd-------------------------------------~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~ 187 (463)
T KOG0607|consen 145 FEDD-------------------------------------TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIAS 187 (463)
T ss_pred hccc-------------------------------------ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHH
Confidence 6543 667899999999998665433 34455666777888999
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCC---cEEEEecCCCCCCCHHHHHHHHHHH-HHHHhcCHHHHHHHHHH-----cCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEG---KLAFLDFGMMSETPEEARFAIIGHV-VHMVNRDYEAMARDYYA-----LDF 350 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g---~i~l~DFGla~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~g~ 350 (487)
+|.+||..||-|||+||+|||-.+.+ -|||+||-+...+....--+...+. ...-.++.+.|++++.. .-+
T Consensus 188 aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~ 267 (463)
T KOG0607|consen 188 ALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATF 267 (463)
T ss_pred HHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhcccccc
Confidence 99999999999999999999997554 4899999887654222100000000 00111334444444332 235
Q ss_pred CCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhH
Q 011399 351 LSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAAS 430 (487)
Q Consensus 351 ~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~ 430 (487)
++...|.||+|..+|-|+.+|. |+.+.--..-.|+-|..++ .--..++.++ -||-. --|+-+
T Consensus 268 YDKrCDlwSLGvIlYImLsGYp--PFvG~Cg~dCGWdrGe~Cr-------~CQ~~LFesI--QEGkY--eFPdkd----- 329 (463)
T KOG0607|consen 268 YDKRCDLWSLGVILYIMLSGYP--PFVGHCGADCGWDRGEVCR-------VCQNKLFESI--QEGKY--EFPDKD----- 329 (463)
T ss_pred ccccccHHHHHHHHHHHHhCCC--CccCccCCcCCccCCCccH-------HHHHHHHHHH--hccCC--cCChhh-----
Confidence 6788999999999999999874 3332211111222222111 0001111111 12221 112211
Q ss_pred hHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 431 YPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 431 ~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
| ...|.++++.++.+|.+|+..|.++.+.+.|||+.
T Consensus 330 --W------ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~ 365 (463)
T KOG0607|consen 330 --W------AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQ 365 (463)
T ss_pred --h------HHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccc
Confidence 1 12456788899999999999999999999999984
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=199.82 Aligned_cols=272 Identities=20% Similarity=0.208 Sum_probs=156.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|.+..+|+.||||+.+..... .+..++.+++.+. .|++++.+.+
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~---------~~~~i~~~~~--------- 68 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS---------ESIYIVRLLD--------- 68 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc---------CCCCccceee---------
Confidence 5799999999999999889999999987643111 0111111111000 0122222221
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCC----CCceEEEeecCCCCcCcHHHHHh----cCCC--HHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYT----SGKVLTMEWVEGVKLNEQVAIES----QGLK--VLDLVNTGIQ 278 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~----~~~~LvmE~~~G~~L~~~~~~~~----~~~~--~~~~~~~~i~ 278 (487)
++.... ...+++|||++| ++.++..... ...+ ....+..++.
T Consensus 69 ---------------------------~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~ 120 (295)
T cd07837 69 ---------------------------VEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLL 120 (295)
T ss_pred ---------------------------eEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence 111111 125899999997 6666543221 1122 3344567788
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
.+|.|+|..|++|+|+||+||+++. ++.++|+|||++..+...... .........+..||.+. .....+.++|+
T Consensus 121 ~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~----~~~~~~~~~Di 195 (295)
T cd07837 121 KGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS-YTHEIVTLWYRAPEVLL----GSTHYSTPVDI 195 (295)
T ss_pred HHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccc-cCCcccccCCCChHHhh----CCCCCCchHHH
Confidence 8999999999999999999999998 889999999998765332110 00011122233344331 12234778999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhh-hhCCCCChHHhHhHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLAL-YADPNFKVLAASYPYFAK 436 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~-~ldP~~~~~~~~~p~~~~ 436 (487)
||+|+.+++++++. .++...+-......+...+ ..|+..... .. ..... .-.|.+. |....
T Consensus 196 ~slG~~l~~l~~g~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~---~~~~~~~~~~~~~------~~~~~ 257 (295)
T cd07837 196 WSVGCIFAEMSRKQ--PLFPGDSELQQLLHIFKLL-----GTPTEQVWP--GV---SKLRDWHEFPQWK------PQDLS 257 (295)
T ss_pred HHHHHHHHHHHcCC--CCCCCCCHHHHHHHHHHHh-----CCCChhhCc--ch---hhccchhhcCccc------chhHH
Confidence 99999999999753 2333322211122222111 111110000 00 00000 0001111 11112
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
......++.+++.+.+||..||..|++..+.+.|+||+
T Consensus 258 ~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 258 RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 22335688899999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-22 Score=192.10 Aligned_cols=255 Identities=19% Similarity=0.135 Sum_probs=157.7
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||+|++|+||+|++..+|+.|++|+........ ... ...+....+.+....|+|++.+.+.+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~-~~~---~~~~~~e~~~l~~~~h~~i~~~~~~~~------------- 63 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR-KNQ---VDQVLTERDILSQAQSPYVVKLYYSFQ------------- 63 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh-hhH---HHHHHHHHHHHHhCCCcchhHHHHhee-------------
Confidence 689999999999998789999999986542211 011 111111112222233666666554321
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccCC
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADP 294 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~Dl 294 (487)
.....+++|||++|++|.++..... ........+..++..++.++|..|++|+|+
T Consensus 64 ------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di 119 (265)
T cd05579 64 ------------------------GKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119 (265)
T ss_pred ------------------------cCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCC
Confidence 1245689999999999987754322 222333445677888999999999999999
Q ss_pred CCCCeEEcCCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 295 kp~Nili~~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
+|.||++++++.++|+|||++.......... ...........+...++++....+..+.+.|+|++|+.+++++++.
T Consensus 120 ~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~- 198 (265)
T cd05579 120 KPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGI- 198 (265)
T ss_pred CHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCC-
Confidence 9999999999999999999887543221000 0000000111222223333333334567899999999999998743
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.++...+.......+.. ..... |. . ...++.+++.+.+
T Consensus 199 -~p~~~~~~~~~~~~~~~----~~~~~----------------------~~-------------~--~~~~~~~~~~i~~ 236 (265)
T cd05579 199 -PPFHGETPEEIFQNILN----GKIEW----------------------PE-------------D--VEVSDEAIDLISK 236 (265)
T ss_pred -CCCCCCCHHHHHHHHhc----CCcCC----------------------Cc-------------c--ccCCHHHHHHHHH
Confidence 23332222211111100 00000 00 0 0136788899999
Q ss_pred HHhhcCcccccc---cchhhccccc
Q 011399 453 LLFKDGRFRHVL---YSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~~---~~~~~~~~~~ 474 (487)
||..+|..|.+. .+.+.|+||.
T Consensus 237 ~l~~~p~~Rpt~~~~~~~l~~~~~~ 261 (265)
T cd05579 237 LLVPDPEKRLGAKSIEEIKNHPFFK 261 (265)
T ss_pred HhcCCHhhcCCCccHHHHhcCcccc
Confidence 999999999998 8889999995
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=195.87 Aligned_cols=248 Identities=15% Similarity=0.098 Sum_probs=153.1
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||.|++|.||+|++..+|+.||+|+..+......... ..+......+....|+++..+++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~---------------- 60 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQ----EHIFSEKEILEECNHPFIVKLYR---------------- 60 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHH----HHHHHHHHHHHhCCCCCEeeeee----------------
Confidence 6899999999999988899999999864321110000 00000000011112333332222
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccCC
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADP 294 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~Dl 294 (487)
+....+..+++|||++|++|.+...... ........+..++..++.++|+.|++|+|+
T Consensus 61 ---------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl 119 (262)
T cd05572 61 ---------------------TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL 119 (262)
T ss_pred ---------------------eEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence 1122356789999999999988744321 122333445567888999999999999999
Q ss_pred CCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccC
Q 011399 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNS 374 (487)
Q Consensus 295 kp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~ 374 (487)
||.||+++.+|.++|+|||++..+...... ....+.+..++++.......+.+.|+|++|+.+++++.+. .
T Consensus 120 ~~~nilv~~~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~--~ 190 (262)
T cd05572 120 KPENLLLDSNGYVKLVDFGFAKKLKSGQKT-------WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGR--P 190 (262)
T ss_pred CHHHEEEcCCCCEEEeeCCcccccCccccc-------ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCC--C
Confidence 999999999999999999999887654211 0011122233333333344577899999999999998743 2
Q ss_pred CCCcCc--HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 375 SVSELN--FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 375 ~~~~~~--~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
++.... ..... +... .+ ...+.+ ....++..++.+.+
T Consensus 191 p~~~~~~~~~~~~----------------------~~~~--~~---~~~~~~--------------~~~~~~~~~~~i~~ 229 (262)
T cd05572 191 PFGEDDEDPMEIY----------------------NDIL--KG---NGKLEF--------------PNYIDKAAKDLIKQ 229 (262)
T ss_pred CcCCCCCCHHHHH----------------------HHHh--cc---CCCCCC--------------CcccCHHHHHHHHH
Confidence 332221 11000 0000 00 000110 01225788899999
Q ss_pred HHhhcCccccc-----ccchhhccccc
Q 011399 453 LLFKDGRFRHV-----LYSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~-----~~~~~~~~~~~ 474 (487)
||..||..|.+ ..+...|+||.
T Consensus 230 ~l~~~p~~R~~~~~~~~~~l~~~~~~~ 256 (262)
T cd05572 230 LLRRNPEERLGNLKGGIKDIKKHKWFN 256 (262)
T ss_pred HccCChhhCcCCcccCHHHHhcChhhh
Confidence 99999999999 67888899985
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-23 Score=225.85 Aligned_cols=195 Identities=19% Similarity=0.194 Sum_probs=124.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+++......- ...+. +.+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e------------------------------~~~~r------flr 51 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENP------------------------------LLKKR------FLR 51 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCH------------------------------HHHHH------HHH
Confidence 679999999999999988899999999875422110 00011 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh----------cCCCHH--HHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES----------QGLKVL--DLVNTGIQC 279 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~----------~~~~~~--~~~~~~i~~ 279 (487)
|++.+.++. +++ +++++ .......++||||++|++|.++..... .+.+.. ..+..++..
T Consensus 52 Ei~ILs~L~-----HPN--IVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~ 124 (932)
T PRK13184 52 EAKIAADLI-----HPG--IVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICA 124 (932)
T ss_pred HHHHHHhCC-----CcC--cCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHH
Confidence 333222221 121 11222 122356789999999999988754211 011111 234467888
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH--HHHH-H---------HHHHHHhcCHHHHHHHHHH
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAII-G---------HVVHMVNRDYEAMARDYYA 347 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~--~~~~-~---------~~~~~~~~~~~~~~~~~~~ 347 (487)
++.|+|+.|++|||+||+||+++.+|.++|+|||++........ .... . +......+++..++++...
T Consensus 125 AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~ 204 (932)
T PRK13184 125 TIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL 204 (932)
T ss_pred HHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc
Confidence 99999999999999999999999999999999999987622110 0000 0 0000011333444444444
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHh
Q 011399 348 LDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 348 ~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
-+..+.++|+||+|+.+++++++.
T Consensus 205 g~~~S~kSDIWSLGVILyELLTG~ 228 (932)
T PRK13184 205 GVPASESTDIYALGVILYQMLTLS 228 (932)
T ss_pred CCCCCcHhHHHHHHHHHHHHHHCC
Confidence 445577899999999999999854
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-22 Score=193.30 Aligned_cols=189 Identities=19% Similarity=0.183 Sum_probs=123.3
Q ss_pred cccccccccEEEEEEEccC---CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYS---GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~---g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|..... +..|+||+.+...... ... .+......+....|++++++.+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~---~~~---~~~~e~~~l~~~~~~~i~~~~~~---------- 64 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE---ERK---DFLKEARVMKKLGHPNVVRLLGV---------- 64 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh---HHH---HHHHHHHHHhhcCCCChheeeee----------
Confidence 4699999999999999855 8999999997653321 000 01111111111113333322221
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH--------hcCCCH--HHHHHHHHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE--------SQGLKV--LDLVNTGIQCS 280 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~--------~~~~~~--~~~~~~~i~~~ 280 (487)
.......+++|||++|++|.+..... ....+. ...+..++..+
T Consensus 65 ---------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 117 (262)
T cd00192 65 ---------------------------CTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117 (262)
T ss_pred ---------------------------ecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHH
Confidence 11245678999999999998875443 123333 33445677789
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
+.++|..|++|+|++|+||+++.++.++|+|||.+..+........ .......+..++++....+..+.+.|+||+
T Consensus 118 l~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 193 (262)
T cd00192 118 MEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRK----KTGGKLPIRWMAPESLKDGIFTSKSDVWSF 193 (262)
T ss_pred HHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccccccc----ccCCCcCccccCHHHhccCCcchhhccHHH
Confidence 9999999999999999999999999999999999987754321000 000111222334444444456788999999
Q ss_pred HHHHHHHHH
Q 011399 361 VPALRNFFD 369 (487)
Q Consensus 361 ~~~l~~~~~ 369 (487)
|+.++++++
T Consensus 194 G~il~~l~~ 202 (262)
T cd00192 194 GVLLWEIFT 202 (262)
T ss_pred HHHHHHHHh
Confidence 999999987
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-22 Score=201.26 Aligned_cols=290 Identities=17% Similarity=0.188 Sum_probs=170.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|++|.||+|++..+|+.||||.+++........ ....+.+ ..+....|+|++.+.+.+...-
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~E~----~~l~~l~h~ni~~~~~~~~~~~-------- 77 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDA-KRTLREI----KLLRHLDHENVIAIKDIMPPPH-------- 77 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEecccccccchh-HHHHHHH----HHHHhcCCCCccchHHheeccc--------
Confidence 68999999999999998899999999987542111000 0111111 1122234777777766432110
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
.+.....+++|||+.+ +|.+..... .........+..++..++.++|+.|++|+
T Consensus 78 ------------------------~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~ 132 (337)
T cd07858 78 ------------------------REAFNDVYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHR 132 (337)
T ss_pred ------------------------ccccCcEEEEEeCCCC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 0011345899999975 665543221 12233344556788889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|+||.||+++.+|.++|+|||++......... .........+..|+.+. ..+..+...|+||+|+.+++++.+.
T Consensus 133 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~il~~l~~g~- 206 (337)
T cd07858 133 DLKPSNLLLNANCDLKICDFGLARTTSEKGDF-MTEYVVTRWYRAPELLL----NCSEYTTAIDVWSVGCIFAELLGRK- 206 (337)
T ss_pred CCCHHHEEEcCCCCEEECcCccccccCCCccc-ccccccccCccChHHHh----cCCCCCCcccHHHHHHHHHHHHcCC-
Confidence 99999999999999999999999876433110 00011122334444432 1234578899999999999998743
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHH--HHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALIL--RSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~--r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
.++...+.......+.... ....+..+.... +....+..+....++. + .......++.+++.+
T Consensus 207 -~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~li 271 (337)
T cd07858 207 -PLFPGKDYVHQLKLITELL---GSPSEEDLGFIRNEKARRYIRSLPYTPRQS---------F--ARLFPHANPLAIDLL 271 (337)
T ss_pred -CCCCCCChHHHHHHHHHHh---CCCChHHhhhcCchhhhHHHHhcCcccccC---------H--HHHcccCCHHHHHHH
Confidence 3343333322222222111 111111110000 0000000000000110 0 112235678899999
Q ss_pred HHHHhhcCcccccccchhhccccccccccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVDFEFVVCDI 482 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~ 482 (487)
.+||..||..|++..+.+.|+||..-..+.+.
T Consensus 272 ~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~ 303 (337)
T cd07858 272 EKMLVFDPSKRITVEEALAHPYLASLHDPSDE 303 (337)
T ss_pred HHHhcCChhhccCHHHHHcCcchhhhcCcccC
Confidence 99999999999999999999999655444443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-23 Score=203.21 Aligned_cols=287 Identities=18% Similarity=0.179 Sum_probs=161.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.||||+........ ..+...++.+. .+....|++++.+.+.+...
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~----~l~~l~h~~iv~~~~~~~~~--------- 83 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIK----ILQLLKHENVVNLIEICRTK--------- 83 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHH----HHHhCCCCCccceEEEEecc---------
Confidence 77999999999999998899999999875321110 00001111111 11112355554443321100
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh--cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
+..+....+..++||||+.+ ++.+...... ........+..++..++.|+|++|++|
T Consensus 84 --------------------~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H 142 (310)
T cd07865 84 --------------------ATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILH 142 (310)
T ss_pred --------------------cccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 00011123456899999976 5554432222 223334455678888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH---HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARF---AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
+|+||+||+++.+|.++|+|||++..+...... ..........+..||.+. .....++++|+||+|+.+++++
T Consensus 143 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~Di~slG~~l~el~ 218 (310)
T cd07865 143 RDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLL----GERDYGPPIDMWGAGCIMAEMW 218 (310)
T ss_pred cCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhc----CCcccCchhhhHHHHHHHHHHH
Confidence 999999999999999999999999866432111 000111122233444331 1112467899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc-cCCCHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL-TDPNPYLR 447 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~-~~~~p~~r 447 (487)
++. .++...+.......+..+. -..|+........+...+... .|.- ........+. .-.++..+
T Consensus 219 t~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~l~~~~~~~~~~ 284 (310)
T cd07865 219 TRS--PIMQGNTEQHQLTLISQLC----GSITPEVWPGVDKLELFKKME---LPQG-----QKRKVKERLKPYVKDPHAL 284 (310)
T ss_pred hCC--CCCCCCCHHHHHHHHHHHh----CCCChhhcccccchhhhhhcc---CCCc-----cchhhHHhcccccCCHHHH
Confidence 743 3333333222222222222 122222111000110000000 0110 0001111111 12467889
Q ss_pred HHHHHHHhhcCcccccccchhhcccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.+.+||..||..|++..+.+.|+||
T Consensus 285 dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 285 DLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHHHHHhcCChhhccCHHHHhcCCCC
Confidence 99999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=203.70 Aligned_cols=288 Identities=17% Similarity=0.171 Sum_probs=166.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|++..+|+.||||+..+....... ...++. +..+....|+|++.+.+.+...
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~--~~~~~E----~~~l~~l~h~niv~~~~~~~~~--------- 75 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFC--QRTLRE----IKILRRFKHENIIGILDIIRPP--------- 75 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhH--HHHHHH----HHHHHhCCCCCcCchhheeecc---------
Confidence 6799999999999999889999999998653211110 011111 1112223366666655422110
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
........+++|||+++ ++.+..............+..++..++.++|+.|++|+|
T Consensus 76 -----------------------~~~~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~d 131 (336)
T cd07849 76 -----------------------SFESFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRD 131 (336)
T ss_pred -----------------------cccccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 00011345899999976 555442222222333445567788899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+||.||+++.+|.++|+|||++.......... ......+..+..||.+ ......+...|+||+|+.+++++++.
T Consensus 132 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~~DvwslGvil~el~~G~ 207 (336)
T cd07849 132 LKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIM----LNSKGYTKAIDIWSVGCILAEMLSNR 207 (336)
T ss_pred CCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHh----hCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999987654321100 0000111223334432 12233467889999999999999853
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+.......+...+ ....+..+..+.. ... ++.... .|.. ...++ ..+....++++++.+.
T Consensus 208 --~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~-~~~~~~-~~~~----~~~~~--~~~~~~~~~~~~~li~ 273 (336)
T cd07849 208 --PLFPGKDYLHQLNLILGVL---GTPSQEDLNCIIS-LRA-RNYIKS-LPFK----PKVPW--NKLFPNADPKALDLLD 273 (336)
T ss_pred --CCCCCCCHHHHHHHHHHHc---CCCCHHHHHHhhc-hhh-hhHHhh-cCcC----CcccH--HHHhcccCcHHHHHHH
Confidence 3444434333222222221 1111111111111 000 000000 0100 00111 1122345788999999
Q ss_pred HHHhhcCcccccccchhhccccccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVDFEFV 478 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~~~~~ 478 (487)
+||..||++|++..+.+.|+||.--+.
T Consensus 274 ~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 274 KMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred HHcCCChhhCcCHHHHhcCccccccCC
Confidence 999999999999999999999954443
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-22 Score=199.93 Aligned_cols=282 Identities=17% Similarity=0.215 Sum_probs=164.2
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHH-HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
.++||+|++|.||+|+...+|+.||||+++..... .... ..++.+ ..+....|++++.+.+.+...
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~--~~~~e~----~~l~~l~h~niv~~~~~~~~~------- 86 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAK--RAYREL----TLLKHMQHENVIGLLDVFTSA------- 86 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchh--HHHHHH----HHHHhcCCCCccchhheeccc-------
Confidence 37899999999999999878999999998643211 1000 011111 111123367766665533211
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
. ........++||||+.+ ++..... ..........+..++..++.++|..|++|
T Consensus 87 -----------------~-------~~~~~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i~H 140 (342)
T cd07879 87 -----------------V-------SGDEFQDFYLVMPYMQT-DLQKIMG-HPLSEDKVQYLVYQMLCGLKYIHSAGIIH 140 (342)
T ss_pred -----------------c-------cCCCCceEEEEeccccc-CHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 0 00011345799999965 4433211 11223334455677888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+||+++.+|.++|+|||++........ ... ....+..|+.+. .....+.+.|+||+|+.+++++.+.
T Consensus 141 ~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~-~~~---~~~~y~aPE~~~----~~~~~~~~~Dv~slGvil~el~~g~ 212 (342)
T cd07879 141 RDLKPGNLAVNEDCELKILDFGLARHADAEMT-GYV---VTRWYRAPEVIL----NWMHYNQTVDIWSVGCIMAEMLTGK 212 (342)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCCcCCCCCCC-Cce---eeecccChhhhc----CccccCchHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999987643211 011 112223344321 1123467899999999999999853
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+....+..+. ...+.. ++.+......... ... ....|.+. .+.. .......++.+++.+.
T Consensus 213 --~pf~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~-~~~-~~~~~~~~-----~~~~-~~~~~~~~~~~~~li~ 278 (342)
T cd07879 213 --TLFKGKDYLDQLTQIL---KVTGVP-GPEFVQKLEDKAA-KSY-IKSLPKYP-----RKDF-STLFPKASPQAVDLLE 278 (342)
T ss_pred --CCCCCCCHHHHHHHHH---HhcCCC-CHHHHHHhcccch-HHH-HhhcCCcc-----cchH-HHHhcCCCHHHHHHHH
Confidence 3444444333332222 222222 2222211111000 000 00001110 0000 1112245778999999
Q ss_pred HHHhhcCcccccccchhhcccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+||..||..|++..+.+.|+||+-
T Consensus 279 ~~l~~dP~~R~~~~e~l~h~~f~~ 302 (342)
T cd07879 279 KMLELDVDKRLTATEALEHPYFDS 302 (342)
T ss_pred HHcCCChhhCcCHHHHhcCcchhh
Confidence 999999999999999999999943
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.4e-23 Score=199.09 Aligned_cols=246 Identities=12% Similarity=0.112 Sum_probs=155.5
Q ss_pred cccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 129 SSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 129 ~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.+....+|+|+||+||+++.+.+|+.+|+|+..+...... |
T Consensus 17 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--------------------------------------e 58 (267)
T PHA03390 17 EIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--------------------------------------E 58 (267)
T ss_pred ccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--------------------------------------h
Confidence 33433336999999999999998999999999864311100 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
... . ....+++++ .+...+. .....++||||++|++|.++.... ....+....+..++..++.++|+
T Consensus 59 ~~~-------~---~~~~~h~~iv~~~~~~~-~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~ 127 (267)
T PHA03390 59 PMV-------H---QLMKDNPNFIKLYYSVT-TLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHK 127 (267)
T ss_pred HHH-------H---HHhhcCCCEEEEEEEEe-cCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 000 0 000122222 2222222 235679999999999998875433 22233344556778889999999
Q ss_pred CCccccCCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
.|++|+|+||+||+++.++ .++++|||++..+..... . .+....++++....+..+++.|+||+|+.++
T Consensus 128 ~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~--~--------~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ 197 (267)
T PHA03390 128 HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSC--Y--------DGTLDYFSPEKIKGHNYDVSFDWWAVGVLTY 197 (267)
T ss_pred CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCcc--C--------CCCCcccChhhhcCCCCCchhhHHHHHHHHH
Confidence 9999999999999999988 999999999887653321 1 1122233344444444577899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++.. |+....... + .... +. ....... ......++.
T Consensus 198 ~l~~g~~--p~~~~~~~~-~-~~~~---------------~~----------~~~~~~~------------~~~~~~~~~ 236 (267)
T PHA03390 198 ELLTGKH--PFKEDEDEE-L-DLES---------------LL----------KRQQKKL------------PFIKNVSKN 236 (267)
T ss_pred HHHHCCC--CCCCCCcch-h-hHHH---------------HH----------HhhcccC------------CcccccCHH
Confidence 9998543 222111000 0 0000 00 0000000 011146788
Q ss_pred HHHHHHHHHhhcCcccccc-cchhhccccc
Q 011399 446 LRDALVELLFKDGRFRHVL-YSPFTINLVD 474 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~-~~~~~~~~~~ 474 (487)
+++.+.+||..||..|++. -+.+.|+||.
T Consensus 237 ~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 237 ANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred HHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 9999999999999999976 7777899984
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.6e-22 Score=190.09 Aligned_cols=244 Identities=20% Similarity=0.166 Sum_probs=156.0
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||.|++|.||++....+|+.||+|+.+....... .... .+....+.+....|+++..+++.+..
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~---~~~~e~~~l~~l~h~~i~~~~~~~~~------------ 64 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR-KEVE---HTLTERNILSRINHPFIVKLHYAFQT------------ 64 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch-HHHH---HHHHHHHHHHHcCCCcHHHHHHHeec------------
Confidence 6899999999999987899999999875432211 0111 11111111122336666666654321
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccCC
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADP 294 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~Dl 294 (487)
....+++|||++|++|.+...... ........+..++..++.++|..|++|+|+
T Consensus 65 -------------------------~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l 119 (250)
T cd05123 65 -------------------------EEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119 (250)
T ss_pred -------------------------CCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence 244579999999999987744321 223334455677888999999999999999
Q ss_pred CCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 295 HPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 295 kp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
+|.||+++.++.++|+|||++....... .....+ ...+..|+. ..-...++..|+|++|+.+++++.+.
T Consensus 120 ~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~---~~~~~~Pe~-----~~~~~~~~~~D~~slG~~~~~l~~g~- 190 (250)
T cd05123 120 KPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCG---TPEYLAPEV-----LLGKGYGKAVDWWSLGVLLYEMLTGK- 190 (250)
T ss_pred CcceEEEcCCCcEEEeecCcceecccCCCcccCCcC---CccccChHH-----hCCCCCCchhhHHHHHHHHHHHHHCC-
Confidence 9999999999999999999988764421 111111 112223333 22333577899999999999999743
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.++...+.......+. .....+| ...+..+++.+.+
T Consensus 191 -~p~~~~~~~~~~~~~~----~~~~~~~---------------------------------------~~~~~~l~~~i~~ 226 (250)
T cd05123 191 -PPFYAEDRKEIYEKIL----KDPLRFP---------------------------------------EFLSPEARDLISG 226 (250)
T ss_pred -CCCCCCCHHHHHHHHh----cCCCCCC---------------------------------------CCCCHHHHHHHHH
Confidence 3333322211111110 0000000 1125677889999
Q ss_pred HHhhcCcccccc---cchhhcccc
Q 011399 453 LLFKDGRFRHVL---YSPFTINLV 473 (487)
Q Consensus 453 ~L~~d~~~r~~~---~~~~~~~~~ 473 (487)
||..||..|.+. .+...|+||
T Consensus 227 ~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 227 LLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HhcCCHhhCCCcccHHHHHhCCCC
Confidence 999999999999 788889887
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-22 Score=194.07 Aligned_cols=251 Identities=18% Similarity=0.145 Sum_probs=152.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|....+|+.|++|++.......... +..+.+...++.+....|++++++.+.
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~------------- 70 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQ--EAVKQLEQEIALLSKLQHPNIVQYLGT------------- 70 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccch--HHHHHHHHHHHHHHhcCCCCchheeee-------------
Confidence 67999999999999998789999999986432110000 000011111111111123333332221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
.......+++|||++|++|.++..... ........+..++..++.++|+.|++|+
T Consensus 71 ------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 126 (258)
T cd06632 71 ------------------------EREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHR 126 (258)
T ss_pred ------------------------EecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 112245689999999999988744322 1222233345678889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCCCCcchHHHHHHHHHHHh
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF-LSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|++|+||+++.++.++|+|||++......... . ...+.+..++++....+. .+.+.|+||+|+.+++++++.
T Consensus 127 dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~--~-----~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~ 199 (258)
T cd06632 127 DIKGANILVDTNGVVKLADFGMAKQVVEFSFA--K-----SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199 (258)
T ss_pred CCCHHHEEECCCCCEEEccCccceeccccccc--c-----ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 99999999999999999999998876433210 0 011122222333332232 567899999999999999743
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++.............. .. --|. .....++.+++.+.
T Consensus 200 --~pf~~~~~~~~~~~~~~--------------------------~~-~~~~--------------~~~~~~~~~~~li~ 236 (258)
T cd06632 200 --PPWSQLEGVAAVFKIGR--------------------------SK-ELPP--------------IPDHLSDEAKDFIL 236 (258)
T ss_pred --CCcccCcHHHHHHHHHh--------------------------cc-cCCC--------------cCCCcCHHHHHHHH
Confidence 33333221111111000 00 0000 01124577788889
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+||..+|..|.+..+-+.|+|+
T Consensus 237 ~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 237 KCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHhhcCcccCcCHHHHhcCCCC
Confidence 9999999999998888888875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-23 Score=204.30 Aligned_cols=256 Identities=17% Similarity=0.123 Sum_probs=158.5
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
..|... +.||+|++|.||+|....+|+.||+|.......... +.
T Consensus 19 ~~y~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~---------------------------------~~- 62 (297)
T cd06656 19 KKYTRF--EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK---------------------------------EL- 62 (297)
T ss_pred hhceee--eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH---------------------------------HH-
Confidence 445555 679999999999999988999999998864321110 00
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh 285 (487)
+..|...+.. .+++++.-..-+.......++||||++|++|.++.............+..++..++.++|
T Consensus 63 -----~~~e~~~l~~-----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH 132 (297)
T cd06656 63 -----IINEILVMRE-----NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLH 132 (297)
T ss_pred -----HHHHHHHHHh-----CCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 122222222212233456799999999999988743222222233344567788999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
+.|++|+|+||+||+++.+|.++|+|||++..+.+..... ....+.+..++++....+..+++.|+||+|+.++
T Consensus 133 ~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~ 206 (297)
T cd06656 133 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 206 (297)
T ss_pred HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc------CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999988765432110 0011122233334444445577899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++.. ++...+... .+... ...-.|.... ....++.
T Consensus 207 ~l~tg~~--pf~~~~~~~---~~~~~-------------------------~~~~~~~~~~------------~~~~~~~ 244 (297)
T cd06656 207 EMVEGEP--PYLNENPLR---ALYLI-------------------------ATNGTPELQN------------PERLSAV 244 (297)
T ss_pred HHHhCCC--CCCCCCcch---heeee-------------------------ccCCCCCCCC------------ccccCHH
Confidence 9997432 222211000 00000 0000011000 0123567
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.++.+.+||..||..|++..+.+.|+||..
T Consensus 245 ~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 245 FRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 788999999999999999999999999853
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-22 Score=191.44 Aligned_cols=247 Identities=15% Similarity=0.077 Sum_probs=155.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|+.+.+|+.|++|......... .+.. .+....+.+....|+++..+++.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~---~~~~e~~~l~~l~h~~i~~~~~~~------------ 68 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR--RERE---EAIDEARVLAKLDSSYIIRYYESF------------ 68 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH--HHHH---HHHHHHHHHHhcCCCCeehheeee------------
Confidence 67999999999999998899999999876321110 0000 000011111122244444433321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHH--HHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLD--LVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~--~~~~~i~~~l~~lh~~giv 290 (487)
......+++|||++|++|.++.... ....+... .+..++..++.++|..|++
T Consensus 69 -------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~ 123 (256)
T cd08529 69 -------------------------LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKIL 123 (256)
T ss_pred -------------------------ccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 1224568999999999998875443 22334333 3345778899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||.||++++++.++|+|||++..+....... . ...+.+..+++++...+..+++.|+||+|+.+++++++
T Consensus 124 h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~--~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 197 (256)
T cd08529 124 HRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA--N----TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTG 197 (256)
T ss_pred cCCCCcceEEEeCCCCEEEcccccceeccCccchh--h----ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhC
Confidence 99999999999999999999999988765432110 0 01122233444455555667889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+.......+. + ..-|.+ ....++.+++.+
T Consensus 198 ~--~p~~~~~~~~~~~~~~------------------------~----~~~~~~--------------~~~~~~~~~~~i 233 (256)
T cd08529 198 K--HPFDANNQGALILKII------------------------R----GVFPPV--------------SQMYSQQLAQLI 233 (256)
T ss_pred C--CCCCCCCHHHHHHHHH------------------------c----CCCCCC--------------ccccCHHHHHHH
Confidence 3 3433333221111110 0 000110 012356678888
Q ss_pred HHHHhhcCcccccccchhhccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINL 472 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~ 472 (487)
.+|+..+|..|++..+-+.|+|
T Consensus 234 ~~~l~~~p~~Rp~~~~ll~~~~ 255 (256)
T cd08529 234 DQCLTKDYRQRPDTFQLLRNPS 255 (256)
T ss_pred HHHccCCcccCcCHHHHhhCCC
Confidence 8999999999988887777766
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5e-22 Score=200.42 Aligned_cols=300 Identities=14% Similarity=0.095 Sum_probs=174.0
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|... ++||.|++|.||+|..+.+|+.||+|++........ +.+...++.+....|++++++.+.+...-..
T Consensus 7 y~~~--~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~-------~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~ 77 (342)
T cd07854 7 YMDL--RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSV-------KHALREIKIIRRLDHDNIVKVYEVLGPSGSD 77 (342)
T ss_pred eEEE--EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchH-------HHHHHHHHHHHhcCCCcchhhHhhhcccccc
Confidence 4444 789999999999999988999999998854322111 1111111122233488888877654321000
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
.. ..+ ..+. .....++||||+++ +|.+.......+......+..++..|+.++|+.
T Consensus 78 ----------~~---------~~~---~~~~-~~~~~~lv~e~~~~-~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 133 (342)
T cd07854 78 ----------LT---------EDV---GSLT-ELNSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA 133 (342)
T ss_pred ----------cc---------ccc---cccc-ccceEEEEeecccc-cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 00 000 0000 01235799999975 665553322233445556678899999999999
Q ss_pred CccccCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHH-H-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 288 GYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFA-I-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 288 givH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
|++|+|+||+||+++. ++.++++|||++..++...... . ........+..||.+. .....+.++|+||+|+.+
T Consensus 134 givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwSlGvil 209 (342)
T cd07854 134 NVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLL----SPNNYTKAIDMWAAGCIF 209 (342)
T ss_pred CcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHh----CccccCchhhHHHHHHHH
Confidence 9999999999999984 5678999999998664321110 0 0001122233444321 112346789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++++++. .++...+-. ..+.......+...+............ .......+ ...|. ..+....++
T Consensus 210 ~el~~g~--~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~--~~~~~~~~~ 274 (342)
T cd07854 210 AEMLTGK--PLFAGAHEL---EQMQLILESVPVVREEDRNELLNVIPS--FVRNDGGE------PRRPL--RDLLPGVNP 274 (342)
T ss_pred HHHHhCC--CCCCCCCHH---HHHHHHHHhcCCCChHHhhhhhhhhhh--hhhhcccc------cCCCH--HHHccCCCH
Confidence 9999743 344333321 122222333333333222211111100 00000000 01111 122335678
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
+.++.+.+||..||..|++..+.+.|+||..-..|
T Consensus 275 ~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~ 309 (342)
T cd07854 275 EALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCP 309 (342)
T ss_pred HHHHHHHHHhCCCchhccCHHHHhCCCccccccCC
Confidence 99999999999999999999999999999743333
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=196.87 Aligned_cols=277 Identities=19% Similarity=0.222 Sum_probs=165.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.+++|..+....... ......+++ +.+....|++++.+.+.+.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~----~~l~~l~~~~i~~~~~~~~----------- 68 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEG-IPKTALREI----KLLKELNHPNIIKLLDVFR----------- 68 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccch-hHHHHHHHH----HHHHHhcCCCcchHHHhhc-----------
Confidence 579999999999999988999999999865432210 000111111 1111222556555555322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
..+..+++|||+++ ++.+.........+ ....+..++..++.++|..|++|
T Consensus 69 --------------------------~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 121 (283)
T cd05118 69 --------------------------HKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILH 121 (283)
T ss_pred --------------------------cCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 12556799999987 66655433222333 33445677888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||.||+++.++.++|+|||.+..+..... ..........+..||.+. .....+.+.|+||+|+.+++++++.
T Consensus 122 ~dl~p~nili~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~----~~~~~~~~~Di~slG~~l~~l~tg~ 196 (283)
T cd05118 122 RDLKPENLLINTEGVLKLADFGLARSFGSPVR-PYTHYVVTRWYRAPELLL----GDKGYSTPVDIWSVGCIFAELLSRR 196 (283)
T ss_pred cCcCHHHEEECCCCcEEEeeeeeeEecCCCcc-cccCccCcccccCcHHHh----cCCCCCchhHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999887754431 111111122334455432 1224577899999999999999853
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+....+..+ ........|..+....... +.... ..|...... ...+....++.+++.+.
T Consensus 197 --~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~i~ 261 (283)
T cd05118 197 --PLFPGKSEIDQLFKI---FRTLGTPDPEVWPKFTSLA---RNYKF-SFPKKAGMP------LPKLFPNASPQALDLLS 261 (283)
T ss_pred --CCCCCCCHHHHHHHH---HHHcCCCchHhcccchhhh---hhhhh-hhccccccC------HHHhhhhhCHHHHHHHH
Confidence 333333322222222 2211111111111111000 00000 001111110 01122345789999999
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+||..||..|.+..+.+.|+||
T Consensus 262 ~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 262 QMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred HHhccCcccCcCHHHHhhCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-22 Score=194.01 Aligned_cols=253 Identities=14% Similarity=0.159 Sum_probs=157.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|.+..+|+.||||+.+....... . .. +..
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~---~-----------------------------~~------~~~ 48 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDD---V-----------------------------SD------IQR 48 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchh---H-----------------------------HH------HHH
Confidence 679999999999999988999999999864422110 0 00 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|...+.++.. ..++.+.-..-+....+..++||||++|++|.++.............+..++..++.++|..|++|+|
T Consensus 49 e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~d 126 (277)
T cd06917 49 EVALLSQLRQ--SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRD 126 (277)
T ss_pred HHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 2222222221 12232221111222345678999999999998875433222233344557788899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHHHHhc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
++|.||+++.+|.++|+|||++..+....... ........+..||. ...+ ..+...|+||+|+.+++++++.
T Consensus 127 l~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~-----~~~~~~~~~~~Dv~slG~~l~~ll~g~- 199 (277)
T cd06917 127 IKAANILVTNTGNVKLCDFGVAALLNQNSSKR-STFVGTPYWMAPEV-----ITEGKYYDTKADIWSLGITIYEMATGN- 199 (277)
T ss_pred cCHHHEEEcCCCCEEEccCCceeecCCCcccc-ccccCCcceeCHHH-----hccCCccccchhHHHHHHHHHHHHhCC-
Confidence 99999999999999999999988765432110 00011112223333 3233 2467899999999999999843
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+.......+ . ....|.+. ....++++.+.+.+
T Consensus 200 -~p~~~~~~~~~~~~~-------~---------------------~~~~~~~~-------------~~~~~~~~~~~i~~ 237 (277)
T cd06917 200 -PPYSDVDAFRAMMLI-------P---------------------KSKPPRLE-------------DNGYSKLLREFVAA 237 (277)
T ss_pred -CCCCCCChhhhhhcc-------c---------------------cCCCCCCC-------------cccCCHHHHHHHHH
Confidence 344333221111000 0 00001110 01145678889999
Q ss_pred HHhhcCcccccccchhhcccccc
Q 011399 453 LLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 453 ~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
||..||..|.+..+.+.|+||.-
T Consensus 238 ~l~~~p~~R~~~~~il~~~~~~~ 260 (277)
T cd06917 238 CLDEEPKERLSAEELLKSKWIKA 260 (277)
T ss_pred HcCCCcccCcCHHHHhhChHhhc
Confidence 99999999999999999999943
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-23 Score=223.77 Aligned_cols=125 Identities=15% Similarity=0.173 Sum_probs=85.6
Q ss_pred ceEEEeecCCCCcCcHHHHHhcC--CCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 244 KVLTMEWVEGVKLNEQVAIESQG--LKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 244 ~~LvmE~~~G~~L~~~~~~~~~~--~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
.||-||||+...+.+++..+... .+..-.+.++|..||.|+|+.|+||||+||.||++++++.|||+|||++......
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~ 750 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKEN 750 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhh
Confidence 48999999998888886655443 3444456688999999999999999999999999999999999999999873211
Q ss_pred HHH-----------------HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 322 ARF-----------------AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 322 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
... ..++.+++..|-.||....... .-++.++|++|+|..+.||+-+
T Consensus 751 ~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~--~~Yn~KiDmYSLGIVlFEM~yP 814 (1351)
T KOG1035|consen 751 LESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS--NKYNSKIDMYSLGIVLFEMLYP 814 (1351)
T ss_pred hhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc--ccccchhhhHHHHHHHHHHhcc
Confidence 000 1122233333333443322110 1246677777777777777654
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.5e-23 Score=201.47 Aligned_cols=260 Identities=18% Similarity=0.188 Sum_probs=155.5
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+.|+.. +.||.|++|.||+|++..+|+.|++|+...........
T Consensus 10 ~~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~-------------------------------- 55 (292)
T cd06644 10 PNEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED-------------------------------- 55 (292)
T ss_pred cchhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHH--------------------------------
Confidence 34556655 66999999999999998889999999986542221100
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSL 281 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l 281 (487)
+..|...+.++ +++.+....-.....+..++||||++|+++...........+ ....+..++..++
T Consensus 56 -------~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 123 (292)
T cd06644 56 -------YMVEIEILATC-----NHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEAL 123 (292)
T ss_pred -------HHHHHHHHHhC-----CCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 11122222111 111111111111234567899999999998766433233333 3445567788899
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
.++|+.|++|+|+||.||+++.+|.++|+|||++........ ....+ ...+..||.+..........+.++|+||
T Consensus 124 ~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~---~~~y~aPE~~~~~~~~~~~~~~~~Dv~s 200 (292)
T cd06644 124 QYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIG---TPYWMAPEVVMCETMKDTPYDYKADIWS 200 (292)
T ss_pred HHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecC---CccccCceeeccccccCCCCCchhhhHh
Confidence 999999999999999999999999999999998875432211 01111 1122233322111001122356789999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+|+.+++++++. .++...+..... .... ....|... ..
T Consensus 201 lG~il~el~~g~--~p~~~~~~~~~~---~~~~-------------------------~~~~~~~~------------~~ 238 (292)
T cd06644 201 LGITLIEMAQIE--PPHHELNPMRVL---LKIA-------------------------KSEPPTLS------------QP 238 (292)
T ss_pred HHHHHHHHhcCC--CCCccccHHHHH---HHHh-------------------------cCCCccCC------------CC
Confidence 999999998743 233322211111 0000 00011100 00
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
...+++..+.+.+||..||..|++..+-+.|+||.
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 273 (292)
T cd06644 239 SKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVS 273 (292)
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 12345677888899999999999988888898874
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.1e-23 Score=200.93 Aligned_cols=276 Identities=17% Similarity=0.173 Sum_probs=157.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|++|.||+|..+.+|+.||||..+........ .. +..
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~--------------------------------~~------~~~ 52 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAP--------------------------------FT------AIR 52 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCc--------------------------------hh------HHH
Confidence 7899999999999999888999999998643211000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ +++.+.-..-+.......++||||+.| +|.++........+ ....+..++..++.|+|+.|++|
T Consensus 53 E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H 126 (291)
T cd07844 53 EASLLKDL-----KHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLH 126 (291)
T ss_pred HHHHHhhC-----CCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 22222222 122222111122334567899999986 77665432222233 33445567888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||+||+++.+|.++|+|||++......... .........+..||.+. .....+.++|+||+|+.+++++.+.
T Consensus 127 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~----~~~~~~~~~Dv~slG~il~~l~~g~ 201 (291)
T cd07844 127 RDLKPQNLLISERGELKLADFGLARAKSVPSKT-YSNEVVTLWYRPPDVLL----GSTEYSTSLDMWGVGCIFYEMATGR 201 (291)
T ss_pred ccCCHHHEEEcCCCCEEECccccccccCCCCcc-ccccccccccCCcHHhh----cCcccCcHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998754321110 01111122233444321 1223467789999999999999753
Q ss_pred ccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC--CHHHHH
Q 011399 372 LNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP--NPYLRD 448 (487)
Q Consensus 372 ~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~--~p~~r~ 448 (487)
.++.... ....+..+...+ ....+..+.... .. ........+... ..+. ....... .+.+.+
T Consensus 202 --~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~---~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~ 266 (291)
T cd07844 202 --PLFPGSTDVEDQLHKIFRVL---GTPTEETWPGVS-SN---PEFKPYSFPFYP----PRPL--INHAPRLDRIPHGEE 266 (291)
T ss_pred --CCCCCCccHHHHHHHHHHhc---CCCChhhhhhhh-hc---cccccccccccC----ChhH--HHhCcCCCCchhHHH
Confidence 2332222 222222221111 111111111000 00 000000001100 0111 1111123 378899
Q ss_pred HHHHHHhhcCcccccccchhhcccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+.+||..||..|.+..+.+.|+||
T Consensus 267 li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 267 LALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred HHHHHhccCcccccCHHHHhcCCCC
Confidence 9999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.3e-22 Score=200.30 Aligned_cols=284 Identities=18% Similarity=0.199 Sum_probs=170.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
.+||+|++|+||+|++..+|+.||||+......... ..-...+.+. .+....|++++.+.+.+...
T Consensus 21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~----~l~~l~h~~iv~~~~~~~~~--------- 86 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAI-HAKRTYRELR----LLKHMDHENVIGLLDVFTPA--------- 86 (343)
T ss_pred EEeccCCceEEEEEEECCCCcEEEEEecccccchhh-HHHHHHHHHH----HHHhccCCCHHHHHHHhhcc---------
Confidence 789999999999999988899999999864321110 0011112211 12233478887777654321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.. .......++||||+ |++|.++......+......+..++..++.++|+.|++|+|
T Consensus 87 ---------------~~-------~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~d 143 (343)
T cd07851 87 ---------------SS-------LEDFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRD 143 (343)
T ss_pred ---------------cc-------ccccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 00 01113468999999 55777764433333344455567888899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
++|.||+++.+|.++|+|||++......... ...+..+..|+.+.. ....+.+.|+||+|+.+++++++..
T Consensus 144 lkp~Nill~~~~~~kL~dfg~~~~~~~~~~~----~~~~~~y~aPE~~~~----~~~~~~~~DvwslGv~l~elltg~~- 214 (343)
T cd07851 144 LKPSNIAVNEDCELKILDFGLARHTDDEMTG----YVATRWYRAPEIMLN----WMHYNQTVDIWSVGCIMAELLTGKT- 214 (343)
T ss_pred CCHHHeEECCCCCEEEccccccccccccccC----CcccccccCHHHHhC----CCCCCchHhHHHHHHHHHHHHhCCC-
Confidence 9999999999999999999999876543111 111222334444321 1234678999999999999998543
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH---HHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL---TVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l---~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
++...+.......+... .. ..|+.+..-...- ..+.++.....+. + .......++.+.+.+
T Consensus 215 -pf~~~~~~~~~~~i~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~s~~l~dli 278 (343)
T cd07851 215 -LFPGSDHIDQLKRIMNL---VG-TPDEELLQKISSESARNYIQSLPQMPKKD---------F--KEVFSGANPLAIDLL 278 (343)
T ss_pred -CCCCCChHHHHHHHHHh---cC-CCCHHHHhhccchhHHHHHHhccccCCCC---------H--HHHhccCCHHHHHHH
Confidence 33333322222222221 11 1122211100000 0000000000000 0 011123478899999
Q ss_pred HHHHhhcCcccccccchhhcccccccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
.+||..||..|++..+.+.|+||.--..+
T Consensus 279 ~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 279 EKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred HHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 99999999999999999999999644333
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=197.89 Aligned_cols=275 Identities=17% Similarity=0.210 Sum_probs=158.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|+||+|++..+|+.||||+.+........ .. +..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~--------------------------------~~------~~~ 47 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTP--------------------------------ST------AIR 47 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccch--------------------------------HH------HHH
Confidence 6799999999999999889999999998744211000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh--cCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++. ++++.-..-+.......++||||++| ++.++..... ...+. ...+..++..++.++|..|+
T Consensus 48 E~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (284)
T cd07836 48 EISLMKELK-----HENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV 121 (284)
T ss_pred HHHHHHhhc-----CCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 222222221 12211111112223567899999987 6665533222 12333 33455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++++|.++|+|||++..+...... .........+..||.+. .....+...|+|++|+.++++++
T Consensus 122 ~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~y~~PE~~~----~~~~~~~~~Dv~slG~~l~~l~~ 196 (284)
T cd07836 122 LHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT-FSNEVVTLWYRAPDVLL----GSRTYSTSIDIWSVGCIMAEMIT 196 (284)
T ss_pred eeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc-cccccccccccChHHhc----CCCCCCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998765332110 00001112233344321 11234667899999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+.......+.... ..|..- ..+.+.... .+...+..... .+ ...+....++.+++.
T Consensus 197 g~--~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~----~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~ 260 (284)
T cd07836 197 GR--PLFPGTNNEDQLLKIFRIM-----GTPTES--TWPGISQLP----EYKPTFPRYPP-QD--LQQLFPHADPLGIDL 260 (284)
T ss_pred CC--CCCCCCCcHHHHHHHHHHh-----CCCChh--hHHHHhcCc----hhcccccCCCh-HH--HHHHhhhcCcHHHHH
Confidence 53 3444333332222222111 111110 011111100 01111110000 00 112223457889999
Q ss_pred HHHHHhhcCcccccccchhhcccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+..||..||..|++..+.+.|+||
T Consensus 261 i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 261 LHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred HHHHhcCCcccCCCHHHHhcCCCC
Confidence 999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=197.60 Aligned_cols=261 Identities=16% Similarity=0.147 Sum_probs=157.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|....+|+.||+|+...........+ +...++.+....|++++.+.+
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~------~~~E~~~l~~l~h~~i~~~~~-------------- 70 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQ------ILRELQIMHECRSPYIVSFYG-------------- 70 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHH------HHHHHHHHHHcCCCCcceEee--------------
Confidence 679999999999999988899999999864322111100 000000001111333332222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH-CCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE-YGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~-~givH 291 (487)
+....+..++||||++|++|.++.... ....+....+..++..++.|+|+ +|++|
T Consensus 71 -----------------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H 127 (284)
T cd06620 71 -----------------------AFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMH 127 (284)
T ss_pred -----------------------eEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 222335678999999999998764332 12233344555677789999996 69999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|++|.||+++.++.++|+|||++..+.........+ +..+..|+. ...+..+.+.|+||+|+.+++++++.
T Consensus 128 ~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~---~~~~~aPE~-----~~~~~~~~~~Di~slG~~l~~l~tg~ 199 (284)
T cd06620 128 RDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVG---TSTYMSPER-----IQGGKYTVKSDVWSLGISIIELALGK 199 (284)
T ss_pred cCCCHHHEEECCCCcEEEccCCcccchhhhccCcccc---CcccCCHHH-----HccCCCCccchHHHHHHHHHHHHhCC
Confidence 9999999999999999999999987653322111111 222333443 33345577899999999999999743
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+-... ....+..+....+.. .....|.+.. ...++.+.+.+.
T Consensus 200 --~p~~~~~~~~~-----------~~~~~~~~~~~~~~~------~~~~~~~~~~-------------~~~~~~~~~li~ 247 (284)
T cd06620 200 --FPFAFSNIDDD-----------GQDDPMGILDLLQQI------VQEPPPRLPS-------------SDFPEDLRDFVD 247 (284)
T ss_pred --CCCcccchhhh-----------hhhhhhHHHHHHHHH------hhccCCCCCc-------------hhcCHHHHHHHH
Confidence 23332221110 001111111111111 1111111100 013456788999
Q ss_pred HHHhhcCcccccccchhhcccccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVDFEF 477 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~~~~ 477 (487)
+|+.+||..|.+..+.+.|+||.-..
T Consensus 248 ~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 248 ACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred HHhcCCcccCcCHHHHhcCccccccc
Confidence 99999999999999999999885443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-23 Score=193.21 Aligned_cols=255 Identities=16% Similarity=0.162 Sum_probs=166.7
Q ss_pred cCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 131 ISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 131 ~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+..+.||.|--|.|-.+.++.+|+.+|+|+++..-..+-+.|+. +....|++++.+++.++...
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLH-----------w~~s~h~~iV~IidVyeNs~----- 128 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELH-----------WMASGHPHIVSIIDVYENSY----- 128 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhh-----------hhhcCCCceEEeehhhhhhc-----
Confidence 45578999999999999999999999999997543332222221 11234899999999876441
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-C--CCHHHHHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-G--LKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~--~~~~~~~~~~i~~~l~~lh~~ 287 (487)
.+ .....+|||.++||.|...+..+.. . +....-+..+|..|+.|||+.
T Consensus 129 ---------------~~-------------rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~ 180 (400)
T KOG0604|consen 129 ---------------QG-------------RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM 180 (400)
T ss_pred ---------------cC-------------ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 11 1345699999999999876544322 2 334445668899999999999
Q ss_pred CccccCCCCCCeEEcCC---CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 288 GYFHADPHPGNLLATPE---GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 288 givH~Dlkp~Nili~~~---g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
+|-|||+||+|+|.+.+ ..+||+|||+++.-... ..+..-..+..+-.|+.+..+ -.+...|+||+|+.+
T Consensus 181 nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~--~~L~TPc~TPyYvaPevlg~e-----KydkscdmwSlgVim 253 (400)
T KOG0604|consen 181 NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP--GDLMTPCFTPYYVAPEVLGPE-----KYDKSCDMWSLGVIM 253 (400)
T ss_pred chhhccCChhheeeecCCCCcceEecccccccccCCC--ccccCCcccccccCHHHhCch-----hcCCCCCccchhHHH
Confidence 99999999999999854 46999999999976532 111111112223334444333 347788999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
|-++.+|- |+-. .+...++|.+-.=+++- -...-+|+++ ..|.
T Consensus 254 YIlLCGyP--PFYS---------------~hg~aispgMk~rI~~g-----qy~FP~pEWs---------------~VSe 296 (400)
T KOG0604|consen 254 YILLCGYP--PFYS---------------NHGLAISPGMKRRIRTG-----QYEFPEPEWS---------------CVSE 296 (400)
T ss_pred HHhhcCCC--cccc---------------cCCccCChhHHhHhhcc-----CccCCChhHh---------------HHHH
Confidence 98887652 2210 12334455443222211 1111122221 2356
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
..++.++.+|.-+|..|.+.-+-+-|+|.
T Consensus 297 ~aKdlIR~LLkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 297 AAKDLIRKLLKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred HHHHHHHHHhcCCchhheeHHHhhcCchh
Confidence 67777888888888888888888888887
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-23 Score=210.80 Aligned_cols=245 Identities=16% Similarity=0.107 Sum_probs=166.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..+|.|||+.|.++.++.+++..+||++.....+. .....++.. ...|+|++++.+.+.
T Consensus 328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~-~~e~~~~~~---------~~~h~niv~~~~v~~----------- 386 (612)
T KOG0603|consen 328 EELGEGSFSAVKYCESSPTDQEPAVKIISKRADDN-QDEIPISLL---------VRDHPNIVKSHDVYE----------- 386 (612)
T ss_pred cccCCCCccceeeeeccccccchhheecccccccc-ccccchhhh---------hcCCCcceeecceec-----------
Confidence 45999999999999999999999999986441111 111111100 113555555554332
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.....|+|||.+.|+.+.+.+...........-+..++..++.|||++|+||||
T Consensus 387 --------------------------~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRD 440 (612)
T KOG0603|consen 387 --------------------------DGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRD 440 (612)
T ss_pred --------------------------CCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecC
Confidence 124568999999998887654333222223334678888999999999999999
Q ss_pred CCCCCeEE-cCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 294 PHPGNLLA-TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 294 lkp~Nili-~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
+||+|||+ +..|+++|+|||.++.+..+ +..-..+.-+-.||.++ .--.++..|+||+|..|++|+++..
T Consensus 441 Lkp~NIL~~~~~g~lrltyFG~a~~~~~~----~~tp~~t~~y~APEvl~-----~~~yt~acD~WSLGvlLy~ML~G~t 511 (612)
T KOG0603|consen 441 LKPGNILLDGSAGHLRLTYFGFWSELERS----CDTPALTLQYVAPEVLA-----IQEYTEACDWWSLGVLLYEMLTGRT 511 (612)
T ss_pred CChhheeecCCCCcEEEEEechhhhCchh----hcccchhhcccChhhhc-----cCCCCcchhhHHHHHHHHHHHhCCC
Confidence 99999999 58999999999999998776 11111222333344433 2233788999999999999998543
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
. +....-+ . .+ ..+...|.++ ...|..+++.+++
T Consensus 512 p--~~~~P~~--~-ei---------------------------~~~i~~~~~s--------------~~vS~~AKdLl~~ 545 (612)
T KOG0603|consen 512 L--FAAHPAG--I-EI---------------------------HTRIQMPKFS--------------ECVSDEAKDLLQQ 545 (612)
T ss_pred c--cccCCch--H-HH---------------------------HHhhcCCccc--------------cccCHHHHHHHHH
Confidence 2 1111111 0 00 0111223332 3568899999999
Q ss_pred HHhhcCcccccccchhhcccc-ccccccc
Q 011399 453 LLFKDGRFRHVLYSPFTINLV-DFEFVVC 480 (487)
Q Consensus 453 ~L~~d~~~r~~~~~~~~~~~~-~~~~~~~ 480 (487)
||+.||..|.+.-+...|+|| +.++.|-
T Consensus 546 LL~~dP~~Rl~~~~i~~h~w~~~~~t~p~ 574 (612)
T KOG0603|consen 546 LLQVDPALRLGADEIGAHPWFLSHPTFPP 574 (612)
T ss_pred hccCChhhCcChhhhccCcchhcCCCCCc
Confidence 999999999999999999999 7777665
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-22 Score=192.86 Aligned_cols=245 Identities=19% Similarity=0.211 Sum_probs=156.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|++|.||+|....+|+.|++|+.+....+.. .. +.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~---------------------------------~~------~~~ 46 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK---------------------------------EK------IIN 46 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHH---------------------------------HH------HHH
Confidence 679999999999999988899999999875432100 01 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++. ++.+.-..-........+++|||++|++|.++........+. ...+..++..++.++|..|++|
T Consensus 47 e~~~l~~l~-----~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h 121 (253)
T cd05122 47 EIQILKKCK-----HPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIH 121 (253)
T ss_pred HHHHHHhCC-----CCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEec
Confidence 222212111 222222111222346678999999999998875443223333 3345567888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
+|++|+||+++++|.++|+|||.+..+..... .... +....++++....+..+.+.|+|++|+.+++++++
T Consensus 122 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~--------~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g 193 (253)
T cd05122 122 RDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV--------GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEG 193 (253)
T ss_pred CCCCHHHEEEccCCeEEEeecccccccccccccccee--------cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhC
Confidence 99999999999999999999999988765431 1111 12222334444445567889999999999999974
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+......... ...-|.... ....++.+++.+
T Consensus 194 ~--~p~~~~~~~~~~~~~~----------------------------~~~~~~~~~------------~~~~~~~~~~~i 231 (253)
T cd05122 194 K--PPYSELPPMKALFKIA----------------------------TNGPPGLRN------------PEKWSDEFKDFL 231 (253)
T ss_pred C--CCCCCCchHHHHHHHH----------------------------hcCCCCcCc------------ccccCHHHHHHH
Confidence 3 3333332111111000 000010000 001256788899
Q ss_pred HHHHhhcCcccccccchhhccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINL 472 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~ 472 (487)
.+||..||..|++..+.+.|+|
T Consensus 232 ~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 232 KKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHccCChhhCCCHHHHhcCCC
Confidence 9999999999999988888876
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-23 Score=202.82 Aligned_cols=279 Identities=17% Similarity=0.179 Sum_probs=155.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|..+.+|+.||+|+.+....+... ..+.+
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~--------------------------------------~~~~~ 52 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVP--------------------------------------FTAIR 52 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCc--------------------------------------HHHHH
Confidence 6799999999999999888999999998643211100 00111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|+..+.++ +++++.-..-+.......++||||+.+ ++.+......... .....+..++..+|.++|..|++|
T Consensus 53 e~~~l~~l-----~h~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 126 (291)
T cd07870 53 EASLLKGL-----KHANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILH 126 (291)
T ss_pred HHHHHHhc-----CCCCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 22222222 122222112222334567899999975 5544322222222 234455678888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||+||+++.+|.++|+|||++......... .........+..|+... .....+.+.|+||+|+.+++++++.
T Consensus 127 ~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~Dv~slG~~l~~l~~g~ 201 (291)
T cd07870 127 RDLKPQNLLISYLGELKLADFGLARAKSIPSQT-YSSEVVTLWYRPPDVLL----GATDYSSALDIWGAGCIFIEMLQGQ 201 (291)
T ss_pred CCCChHHEEEcCCCcEEEeccccccccCCCCCC-CCCccccccccCCceee----cCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998754321110 00000111222333221 1112356689999999999999854
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+- ..+.+....... +.|+.. ....+..+........+... ....+...+.+ ..++.+++.+.
T Consensus 202 --~~f~~~~~--~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~ll~ 269 (291)
T cd07870 202 --PAFPGVSD--VFEQLEKIWTVL--GVPTED--TWPGVSKLPNYKPEWFLPCK--PQQLRVVWKRL--SRPPKAEDLAS 269 (291)
T ss_pred --CCCCCchh--HHHHHHHHHHHc--CCCChh--hhhhhhhcccccchhccccC--Ccchhhhcccc--CCChHHHHHHH
Confidence 33433221 122222222111 122211 00011000000000000000 00000000111 24688999999
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+||..||+.|++..+.+.|+||
T Consensus 270 ~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 270 QMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred HHhCcCcccCcCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.9e-23 Score=205.10 Aligned_cols=288 Identities=15% Similarity=0.119 Sum_probs=169.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|.||+|..+.+|+.||+|++....... .....+...+..+....|++++.+.+.+...
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------- 76 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP-----TLAKRTLRELKILRHFKHDNIIAIRDILRPP--------- 76 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc-----cchHHHHHHHHHHHhcCCCCccCHHHhcccc---------
Confidence 67999999999999999899999999986432110 0011111111112223367766666543211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
.......++||||+.| +|.+..... .........+..++..++.++|..|++|+
T Consensus 77 ------------------------~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 131 (334)
T cd07855 77 ------------------------GADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHR 131 (334)
T ss_pred ------------------------CCCCceEEEEEehhhh-hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 0012345799999975 665553221 12233445556788889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH--H-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARF--A-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+||+||+++.+|.++|+|||++..+...... . .........+..|+.+. ..+..+.+.|+||+|+.++++++
T Consensus 132 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~----~~~~~~~~~Di~slG~~l~el~~ 207 (334)
T cd07855 132 DLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLL----SLPEYTTAIDMWSVGCIFAEMLG 207 (334)
T ss_pred CCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhc----CCcccccccchHHHHHHHHHHHc
Confidence 99999999999999999999998765432110 0 00111122233444432 22345788999999999999987
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCC-hHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVP-AYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p-~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
+. .++...+....+..+. . ..+.| +.+..-...-...+.. ... |.... .+ ...+....++.+++
T Consensus 208 g~--~pf~~~~~~~~~~~~~---~--~~g~~~~~~~~~~~~~~~~~~~-~~~-~~~~~----~~--~~~~~~~~~~~~~~ 272 (334)
T cd07855 208 RR--QLFPGKNYVHQLKLIL---S--VLGSPSEEVLNRIGSDRVRKYI-QNL-PRKQP----VP--WSKIFPKASPEALD 272 (334)
T ss_pred CC--CccCCCChHHHHHHHH---H--HhCCChhHhhhhhchhhHHHHH-hhc-ccCCC----CC--HHHHcccCCHHHHH
Confidence 43 3444433322222111 1 12222 2221111111000000 000 11000 01 12233345789999
Q ss_pred HHHHHHhhcCcccccccchhhcccccccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
.+.+||..||..|.+..+.+.|+||.-...+
T Consensus 273 li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~ 303 (334)
T cd07855 273 LLSQMLQFDPEERITVEQALQHPFLAQYHDP 303 (334)
T ss_pred HHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence 9999999999999999999999999544433
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=196.44 Aligned_cols=256 Identities=16% Similarity=0.093 Sum_probs=156.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|+||+|....+|..||+|+........ +.. . +..
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~-----------------------------~------~~~ 48 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVD-----------------------------E------LRK 48 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHH-----------------------------H------HHH
Confidence 67999999999999988789999999986332111 110 0 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc--CCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--GLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+..+ +++.+.-..-........+++|||++|++|.+....... ..+ ....+..++..++.++|+.|+
T Consensus 49 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i 123 (267)
T cd06610 49 EVQAMSQC-----NHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ 123 (267)
T ss_pred HHHHHHhc-----CCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 22211111 122221111112234567899999999999887543221 233 333455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~ 368 (487)
+|+|++|.||++++++.++|+|||++..+........ .......+.+..++++....+ ..+.+.|+||+|+.+++++
T Consensus 124 ~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~ 201 (267)
T cd06610 124 IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR--KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELA 201 (267)
T ss_pred ecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc--cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHH
Confidence 9999999999999999999999999876654321100 000001111222233333333 4577899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
++. .|+...+......... . ...|.+... .+ ....++..++
T Consensus 202 ~g~--~p~~~~~~~~~~~~~~---~-------------------------~~~~~~~~~---~~------~~~~~~~~~~ 242 (267)
T cd06610 202 TGA--APYSKYPPMKVLMLTL---Q-------------------------NDPPSLETG---AD------YKKYSKSFRK 242 (267)
T ss_pred hCC--CCccccChhhhHHHHh---c-------------------------CCCCCcCCc---cc------cccccHHHHH
Confidence 843 2333222111111110 0 000110000 00 1234677889
Q ss_pred HHHHHHhhcCcccccccchhhcccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+.+||.+||..|++..+-+.|+||
T Consensus 243 li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 243 MISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HHHHHcCCChhhCcCHHHHhhCCCC
Confidence 9999999999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.7e-23 Score=201.66 Aligned_cols=254 Identities=17% Similarity=0.119 Sum_probs=157.5
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|++|.||+|....+|+.||+|.......... ..
T Consensus 22 y~~~--~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~---------------------------------~~--- 63 (296)
T cd06654 22 YTRF--EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---------------------------------EL--- 63 (296)
T ss_pred eeeE--EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchH---------------------------------HH---
Confidence 4444 679999999999999988999999998864321110 00
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
+..|...+..+ +++++.-..-........++||||++|++|.++.............+..++..++.++|..
T Consensus 64 ---~~~e~~~l~~~-----~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~ 135 (296)
T cd06654 64 ---IINEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN 135 (296)
T ss_pred ---HHHHHHHHHhC-----CCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11111111111 1222211111122245679999999999998875332222233334556788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||.||+++.++.++|+|||++.......... . ...+.+..++++....+..+++.|+|++|+.++++
T Consensus 136 gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~-~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l 209 (296)
T cd06654 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-S-----TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209 (296)
T ss_pred CcccCCCCHHHEEEcCCCCEEECccccchhcccccccc-C-----cccCCccccCHHHHcCCCCCccchHHHHHHHHHHH
Confidence 99999999999999999999999999988664432110 0 00122223334444445567899999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+++.. |+...+.... +..... ...|.... ....++.++
T Consensus 210 ~~g~~--pf~~~~~~~~---~~~~~~-------------------------~~~~~~~~------------~~~~~~~l~ 247 (296)
T cd06654 210 IEGEP--PYLNENPLRA---LYLIAT-------------------------NGTPELQN------------PEKLSAIFR 247 (296)
T ss_pred HhCCC--CCCCCCHHHh---HHHHhc-------------------------CCCCCCCC------------ccccCHHHH
Confidence 97442 3322211100 000000 00000000 012346677
Q ss_pred HHHHHHHhhcCcccccccchhhcccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+.+||.+||..|.+..+.+.|+||..
T Consensus 248 ~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 248 DFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred HHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 8888999999999999988889999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.2e-22 Score=193.38 Aligned_cols=256 Identities=16% Similarity=0.112 Sum_probs=157.1
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
.+++|..+ +.||+|+||.||+|....+|+.||||+.......... .
T Consensus 2 ~~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~--------------------------------~ 47 (277)
T cd06641 2 PEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--------------------------------E 47 (277)
T ss_pred HHHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHH--------------------------------H
Confidence 45677766 6799999999999998878999999987533111000 0
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (487)
++.+|...+.++ +++.+.-..-+.......++||||++|++|.++.............+..++..++.+
T Consensus 48 ------~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~ 116 (277)
T cd06641 48 ------DIQQEITVLSQC-----DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDY 116 (277)
T ss_pred ------HHHHHHHHHHhc-----CCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 122222222222 122222111122334567999999999999877432222223334455778889999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+|+.|++|+|+||+||+++.+|.++++|||++..+....... ........+..|+ ....+..+...|+||+|+.
T Consensus 117 lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~y~~PE-----~~~~~~~~~~~Dv~slG~~ 190 (277)
T cd06641 117 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPE-----VIKQSAYDSKADIWSLGIT 190 (277)
T ss_pred HccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhh-ccccCCccccChh-----hhccCCCCchhhHHHHHHH
Confidence 999999999999999999999999999999988765432110 0000111222333 3333445677899999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++. .++...+.......+. ....|. +....+
T Consensus 191 l~~l~~g~--~p~~~~~~~~~~~~~~----------------------------~~~~~~--------------~~~~~~ 226 (277)
T cd06641 191 AIELAKGE--PPHSELHPMKVLFLIP----------------------------KNNPPT--------------LEGNYS 226 (277)
T ss_pred HHHHHcCC--CCCCccchHHHHHHHh----------------------------cCCCCC--------------CCcccC
Confidence 99998743 2332222111111100 000010 011235
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+.+++.+.+||..+|..|++..+.+.|+||.
T Consensus 227 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~ 257 (277)
T cd06641 227 KPLKEFVEACLNKEPSFRPTAKELLKHKFIV 257 (277)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHhCHHHh
Confidence 6677788888888888888888888888874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-22 Score=198.49 Aligned_cols=278 Identities=17% Similarity=0.159 Sum_probs=160.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|.||+|..+.+|+.||+|..+...... .+... +..
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-------------------------------~~~~~------~~~ 53 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-------------------------------GFPIT------SLR 53 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-------------------------------cchhh------HHH
Confidence 67999999999999998889999999986432110 00001 112
Q ss_pred HHHHHHHHHHHhCCCCCeE-eceeee-cCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVL-VPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~-vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++. ++.+. +...+. ......+++|||+++ +|.++........+ ....+..++..+|.|+|+.|+
T Consensus 54 e~~~l~~l~-----h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 127 (293)
T cd07843 54 EINILLKLQ-----HPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWI 127 (293)
T ss_pred HHHHHHhcC-----CCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 222222221 22221 111111 112667999999986 77665433222233 334556778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++..+...... .........+..||.+. .....+.+.|+||+|+.++++++
T Consensus 128 ~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~~----~~~~~~~~~Di~slG~~l~~l~~ 202 (293)
T cd07843 128 LHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP-YTQLVVTLWYRAPELLL----GAKEYSTAIDMWSVGCIFAELLT 202 (293)
T ss_pred eeccCCHHHEEECCCCcEEEeecCceeeccCCccc-cccccccccccCchhhc----CCccccchhhHHHHHHHHHHHHh
Confidence 99999999999999999999999998876543111 11111122233344321 11224678999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC-CCHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD-PNPYLRD 448 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~-~~p~~r~ 448 (487)
+. .++...+.......+.. ......+..+. ....+.... ......+... .+....... .++.+++
T Consensus 203 g~--~~f~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 268 (293)
T cd07843 203 KK--PLFPGKSEIDQLNKIFK---LLGTPTEKIWP-GFSELPGAK-KKTFTKYPYN-------QLRKKFPALSLSDNGFD 268 (293)
T ss_pred CC--CCCCCCChHHHHHHHHH---HhCCCchHHHH-Hhhccchhc-ccccccccch-------hhhccccccCCChHHHH
Confidence 53 34433332222222221 11111111100 000000000 0000001000 111111111 3788999
Q ss_pred HHHHHHhhcCcccccccchhhcccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+.+||..||++|++..+.+.|+||
T Consensus 269 li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 269 LLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHHHHhccCccccCCHHHHhcCCCC
Confidence 9999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-22 Score=197.25 Aligned_cols=251 Identities=16% Similarity=0.132 Sum_probs=151.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||+|+.+....... ....+ .
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~------------------------------------~ 48 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE--QKRLL------------------------------------M 48 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH--HHHHH------------------------------------H
Confidence 679999999999999998999999999875422110 01111 1
Q ss_pred HHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHH---hcCCCHH--HHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKVL--DLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~~--~~~~~~i~~~l~~lh~~ 287 (487)
|...+. +. .+++.+ .+...+ ...+..+++|||++| +|.++.... ....+.. ..+..++..++.++|++
T Consensus 49 e~~~~~---~~-~~~~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 122 (283)
T cd06617 49 DLDISM---RS-VDCPYTVTFYGAL-FREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK 122 (283)
T ss_pred HHHHHH---HH-cCCCCeeeeeEEE-ecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 111111 11 122222 111211 234567899999986 565543221 1123333 34567788899999997
Q ss_pred -CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 288 -GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 288 -givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
|++|+|+||+||+++.++.++|+|||++..+....... ..+ +..+..|+.+.... .....+.+.|+|++|+.++
T Consensus 123 ~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~---~~~y~aPE~~~~~~-~~~~~~~~~Di~slG~~l~ 198 (283)
T cd06617 123 LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAG---CKPYMAPERINPEL-NQKGYDVKSDVWSLGITMI 198 (283)
T ss_pred CCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccC---CccccChhhcCCcc-cccccCccccchhhHHHHH
Confidence 99999999999999999999999999998764321110 111 11223333321100 0012367789999999999
Q ss_pred HHHHHhccCCCCcC--cHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 366 NFFDDALNSSVSEL--NFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 366 ~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++.. |+... .+.. +..... ...|.+. ....+
T Consensus 199 ~l~~g~~--p~~~~~~~~~~----~~~~~~-------------------------~~~~~~~-------------~~~~~ 234 (283)
T cd06617 199 ELATGRF--PYDSWKTPFQQ----LKQVVE-------------------------EPSPQLP-------------AEKFS 234 (283)
T ss_pred HHHhCCC--CCCccccCHHH----HHHHHh-------------------------cCCCCCC-------------ccccC
Confidence 9998432 33211 1111 100000 0111110 01235
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
+++++.+.+||.++|..|++..+-+.|+||...
T Consensus 235 ~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 235 PEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 678889999999999999999999999999543
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-22 Score=196.81 Aligned_cols=275 Identities=18% Similarity=0.189 Sum_probs=160.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|+...+|+.||+|+.+..... .+..++.+++ ...|++++.+.+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~----------~l~~~~i~~~~~--------- 65 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQ----------KLRHPNIVRLKE--------- 65 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHH----------hccCCCeeehee---------
Confidence 5799999999999999878999999999755210 1111111111 111333333222
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecC-CCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLL 285 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh 285 (487)
++... ....++||||+++ +|.+.........+. ...+..++..++.++|
T Consensus 66 ---------------------------~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH 117 (287)
T cd07840 66 ---------------------------IVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH 117 (287)
T ss_pred ---------------------------eEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12111 2567899999986 666553322123333 3445577888999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
..|++|+|+||+||+++++|.++|+|||++..+................+..||.+. .....+++.|+|++|+.++
T Consensus 118 ~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~----~~~~~~~~~Dv~slG~~l~ 193 (287)
T cd07840 118 SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLL----GATRYGPEVDMWSVGCILA 193 (287)
T ss_pred HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeE----ccccCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999877543211111111122233344321 1122467799999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++. .++...+.......+...+.. ..+..+.... .+... ....+.... ...+........++.
T Consensus 194 el~t~~--~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~----~~~~~~~~~----~~~~~~~~~~~~~~~ 259 (287)
T cd07840 194 ELFLGK--PIFQGSTELEQLEKIFELCGS---PTDENWPGVS-KLPWF----ENLKPKKPY----KRRLREFFKHLIDPS 259 (287)
T ss_pred HHHhCC--CCCCCCChHHHHHHHHHHhCC---Cchhhccccc-cchhh----hhccccccc----hhHHHHHhcccCCHH
Confidence 999853 344444433333222222111 1111110000 00000 001111111 011111222123789
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.+.+.+||..+|..|.+..+.+.|+||
T Consensus 260 ~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 260 ALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-22 Score=197.45 Aligned_cols=259 Identities=18% Similarity=0.180 Sum_probs=156.9
Q ss_pred hhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHH--HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE--AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 127 ~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~--~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
.|+.. +.||+|+||+||+|.+..+|+.||+|+....... .+..++.+++.+ ..|++++.+.+.+...
T Consensus 17 ~~~~~--~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~---------~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 17 IFELV--EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKY---------SHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhh--eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHh---------cCCCcEEEEeeehhcc
Confidence 34444 6799999999999999889999999998543211 111111111110 0133333333221100
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSL 281 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l 281 (487)
.........+++|||+.|++|.++..... ...+. ...+..++..++
T Consensus 86 -------------------------------~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al 134 (282)
T cd06636 86 -------------------------------SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGL 134 (282)
T ss_pred -------------------------------cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHH
Confidence 00011244689999999999988754422 22333 234556788899
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
.|+|+.|++|+|+||+||+++.++.++|+|||++..+..... ....+ ...+..||.+...-....-.+.+.|+||
T Consensus 135 ~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~---~~~y~aPE~l~~~~~~~~~~~~~~Dvws 211 (282)
T cd06636 135 AHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIG---TPYWMAPEVIACDENPDATYDYRSDIWS 211 (282)
T ss_pred HHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccc---cccccCHhhcCcccCcCcCCCcccchhH
Confidence 999999999999999999999999999999999876543211 11111 2223344433211000122356789999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+|+.+++++++. .|+........ +.. +.....+.. ..
T Consensus 212 lG~~l~el~~g~--~p~~~~~~~~~---~~~-------------------------~~~~~~~~~-------------~~ 248 (282)
T cd06636 212 LGITAIEMAEGA--PPLCDMHPMRA---LFL-------------------------IPRNPPPKL-------------KS 248 (282)
T ss_pred HHHHHHHHHhCC--CCccccCHHhh---hhh-------------------------HhhCCCCCC-------------cc
Confidence 999999999853 23322211000 000 000000110 01
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
...++.+.+.+.+||..||..|.+..+-+.|+||
T Consensus 249 ~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 249 KKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred cccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 1346788899999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-22 Score=193.39 Aligned_cols=249 Identities=15% Similarity=0.103 Sum_probs=154.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|..+.+|+.||+|.+....... ... +. +..
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~-----------------------------~~------~~~ 48 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR--RER-----------------------------KA------AEQ 48 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH--HHH-----------------------------HH------HHH
Confidence 67999999999999998889999999985321110 000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ .+...+.+...+.......+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 49 e~~~l~~l----~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~ 124 (257)
T cd08223 49 EAQLLSQL----KHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHIL 124 (257)
T ss_pred HHHHHHhC----CCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 11111111 111111111222222334689999999999987654322 123333 33446777899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||.||+++.++.++|+|||++..+...... . ....+.+..++++....+..+.+.|+||+|+.++++++.
T Consensus 125 H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08223 125 HRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM--A----STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATL 198 (257)
T ss_pred ccCCCchhEEEecCCcEEEecccceEEecccCCc--c----ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcC
Confidence 9999999999999999999999998765322110 0 001122223444444445567789999999999999874
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+.......+. .+. -|.. ....+++..+.+
T Consensus 199 ~--~~~~~~~~~~~~~~~~------------------------~~~----~~~~--------------~~~~~~~~~~li 234 (257)
T cd08223 199 K--HAFNAKDMNSLVYRII------------------------EGK----LPPM--------------PKDYSPELGELI 234 (257)
T ss_pred C--CCCCCCCHHHHHHHHH------------------------hcC----CCCC--------------ccccCHHHHHHH
Confidence 2 2333322221111110 000 0100 113456788899
Q ss_pred HHHHhhcCcccccccchhhcccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+|+..||..|++..+.+.|+||
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 235 ATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHhccCcccCCCHHHHhcCCCC
Confidence 99999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-22 Score=196.73 Aligned_cols=250 Identities=18% Similarity=0.111 Sum_probs=157.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.+..+|+.||+|+........ +.. . +..
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~-----------------------------~------~~~ 48 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAED---EIE-----------------------------D------IQQ 48 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccch---HHH-----------------------------H------HHH
Confidence 57999999999999998899999999986331100 000 0 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|...+..+ . ++.+.-+..+.......++||||++|++|.+.......+......+..++..++.++|..|++|+|
T Consensus 49 e~~~l~~l----~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~d 123 (274)
T cd06609 49 EIQFLSQC----R-SPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRD 123 (274)
T ss_pred HHHHHHHc----C-CCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 21111111 1 222221111222235678999999999998875443334444455567788899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
++|.||+++.+|.++|+|||+++.+....... ........+..|| ....+..+++.|+|++|+.+++++++.
T Consensus 124 l~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~y~~PE-----~~~~~~~~~~sDv~slG~il~~l~tg~-- 195 (274)
T cd06609 124 IKAANILLSEEGDVKLADFGVSGQLTSTMSKR-NTFVGTPFWMAPE-----VIKQSGYDEKADIWSLGITAIELAKGE-- 195 (274)
T ss_pred CCHHHEEECCCCCEEEcccccceeeccccccc-ccccCCccccChh-----hhccCCCCchhhHHHHHHHHHHHHhCC--
Confidence 99999999999999999999998875432100 0011111223333 333344678899999999999999843
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
.++...+.......+. ....|.... ...++..++.+.+|
T Consensus 196 ~p~~~~~~~~~~~~~~----------------------------~~~~~~~~~-------------~~~~~~~~~~l~~~ 234 (274)
T cd06609 196 PPLSDLHPMRVLFLIP----------------------------KNNPPSLEG-------------NKFSKPFKDFVSLC 234 (274)
T ss_pred CCcccCchHHHHHHhh----------------------------hcCCCCCcc-------------cccCHHHHHHHHHH
Confidence 3333322111110000 001111100 01356678889999
Q ss_pred HhhcCcccccccchhhcccccc
Q 011399 454 LFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 454 L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
|..||..|++..+.+.|+||.-
T Consensus 235 l~~~p~~Rpt~~~il~~~~~~~ 256 (274)
T cd06609 235 LNKDPKERPSAKELLKHKFIKK 256 (274)
T ss_pred hhCChhhCcCHHHHhhChhhcC
Confidence 9999999999988899999843
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-23 Score=208.46 Aligned_cols=200 Identities=20% Similarity=0.248 Sum_probs=142.2
Q ss_pred CCCHHHHHHHHHHHhCCCHHhhhcccCC-cccccccccEEEEEEEccCCcEEEEEEecCChHH---HHHHHHHHHHHHHH
Q 011399 106 TFPDAEAFSCIERELGLTLDSIFSSISP-SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE---AIGLDFYLIRGVGF 181 (487)
Q Consensus 106 ~~~~~~~~~~i~~~lg~~~~~~f~~~~~-~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~---~~~~dl~~l~~~~~ 181 (487)
-+++++++... ..|++ ..||.|+||.||+|.+. +|+.||||........ .+..++.+
T Consensus 64 ~fs~~el~~AT------------~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~------ 124 (361)
T KOG1187|consen 64 SFSYDELRKAT------------NNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEI------ 124 (361)
T ss_pred eeeHHHHHHHH------------hCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHH------
Confidence 35666665554 23432 67999999999999998 7899999988765432 23233222
Q ss_pred HHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCC-CceEEEeecCCCCcCcHH
Q 011399 182 LINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS-GKVLTMEWVEGVKLNEQV 260 (487)
Q Consensus 182 ~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~-~~~LvmE~~~G~~L~~~~ 260 (487)
+....|+|++.++..+. ..+ .++||.||+++|+|.+..
T Consensus 125 ----ls~l~H~Nlv~LlGyC~-------------------------------------e~~~~~~LVYEym~nGsL~d~L 163 (361)
T KOG1187|consen 125 ----LSRLRHPNLVKLLGYCL-------------------------------------EGGEHRLLVYEYMPNGSLEDHL 163 (361)
T ss_pred ----HhcCCCcCcccEEEEEe-------------------------------------cCCceEEEEEEccCCCCHHHHh
Confidence 22344777777766332 124 478999999999998875
Q ss_pred HHHhc-CCCHHH--HHHHHHHHHHHHHHHCC---ccccCCCCCCeEEcCCCcEEEEecCCCCCCCH-HHHHHHHHHHHHH
Q 011399 261 AIESQ-GLKVLD--LVNTGIQCSLRQLLEYG---YFHADPHPGNLLATPEGKLAFLDFGMMSETPE-EARFAIIGHVVHM 333 (487)
Q Consensus 261 ~~~~~-~~~~~~--~~~~~i~~~l~~lh~~g---ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~-~~~~~~~~~~~~~ 333 (487)
..... .+++.. -++.+++.||+|||... |+|||+||.|||+|++...||+|||+++..+. ...... . .
T Consensus 164 ~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~--~---~ 238 (361)
T KOG1187|consen 164 HGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVST--T---V 238 (361)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceee--e---c
Confidence 54333 445544 44566777999999855 99999999999999999999999999976654 321100 0 0
Q ss_pred HhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 334 VNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 334 ~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
.++..+++++++..|.++.++|++|||..+.|++++-
T Consensus 239 -~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr 275 (361)
T KOG1187|consen 239 -MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGR 275 (361)
T ss_pred -CCCCccCChhhhccCCcCcccccccchHHHHHHHhCC
Confidence 2334455666667799999999999999999998743
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-22 Score=182.07 Aligned_cols=165 Identities=20% Similarity=0.218 Sum_probs=110.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
.+||+|++|+||+|++. +|+.||||+.+++.... ..+.+.+......... ....++..+..++ +..
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------~~~ 68 (190)
T cd05145 3 GCISTGKEANVYHARTG-DGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSR---YSKSNPRKLVFAW---------AEK 68 (190)
T ss_pred ceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceE-eeHHHHhcCCcccccc---cccCCHHHHHHHH---------HHH
Confidence 67999999999999987 99999999999874321 1111111100000000 0002233333222 346
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH-CCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE-YGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~-~giv 290 (487)
|.+++.++.+ +.+.+|.++.. ...+|||||++|+++.... ......+ ....+..++..++.++|. .|++
T Consensus 69 E~~~l~~l~~-----~~i~~p~~~~~--~~~~lVmE~~~g~~~~~~~-l~~~~~~~~~~~~i~~~l~~~l~~lH~~~giv 140 (190)
T cd05145 69 EFRNLKRLYE-----AGVPVPEPILL--KKNVLVMEFIGDDGSPAPR-LKDVPLEEEEAEELYEQVVEQMRRLYQEAGLV 140 (190)
T ss_pred HHHHHHHHHh-----CCCCCceEEEe--cCCEEEEEEecCCCchhhh-hhhccCCHHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 7788888764 34567777654 3469999999998654321 2222332 334556678889999999 9999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
||||||+||+++ +|+++|+|||+++.++..
T Consensus 141 HrDlkP~NIll~-~~~~~liDFG~a~~~~~~ 170 (190)
T cd05145 141 HGDLSEYNILYH-DGKPYIIDVSQAVELDHP 170 (190)
T ss_pred cCCCChhhEEEE-CCCEEEEEcccceecCCC
Confidence 999999999998 899999999999988754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-22 Score=191.71 Aligned_cols=245 Identities=18% Similarity=0.190 Sum_probs=154.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChH-HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE-EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~-~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||+|++|.||+|....+++.|++|..+.... +.+..+++.++ ...|++++.+.+.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~----------~l~~~~i~~~~~~------------ 66 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILK----------QCDSPYIVKYYGS------------ 66 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHH----------hCCCCcEeeeeee------------
Confidence 679999999999999987799999999864311 01111111110 1123333322221
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
+ ......+++|||++|++|.++........+. ...+..++..++.++|..|++
T Consensus 67 ------------------------~-~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~ 121 (256)
T cd06612 67 ------------------------Y-FKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKI 121 (256)
T ss_pred ------------------------e-ecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 1 1225568999999999998875443333333 334556778899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|++|+||+++.+|.++|+|||++..+....... ....+....++++.......+.+.|+||+|+.+++++++
T Consensus 122 H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g 195 (256)
T cd06612 122 HRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR------NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEG 195 (256)
T ss_pred cCCCCcceEEECCCCcEEEcccccchhcccCcccc------ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999999998775432110 001111222333333333457789999999999999874
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+....... +.....+.+.. | ...++.+++.+
T Consensus 196 ~--~p~~~~~~~~~~~~----------------------------~~~~~~~~~~~-----~-------~~~~~~~~~~i 233 (256)
T cd06612 196 K--PPYSDIHPMRAIFM----------------------------IPNKPPPTLSD-----P-------EKWSPEFNDFV 233 (256)
T ss_pred C--CCCCCcchhhhhhh----------------------------hccCCCCCCCc-----h-------hhcCHHHHHHH
Confidence 3 23332211110000 00000111110 0 12356778899
Q ss_pred HHHHhhcCcccccccchhhcccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+|+..||..|.+..+.+.|+||
T Consensus 234 ~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 234 KKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHhcChhhCcCHHHHhcCCCC
Confidence 99999999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-22 Score=197.18 Aligned_cols=196 Identities=14% Similarity=0.154 Sum_probs=119.2
Q ss_pred cccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|+.. .+|+.||+|+.+........ ...+...+
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~-----------------------------~~~~~~~~--- 53 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKA-----------------------------KTTEHTRT--- 53 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcc-----------------------------hHHHHHHH---
Confidence 57999999999999974 37899999998643111000 00011111
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
|.+.+.++ .+++.+.-.....+.....++||||++|++|.+...... ........+..++..++.++|+.|+
T Consensus 54 ---e~~~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i 126 (290)
T cd05613 54 ---ERQVLEHI----RQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGI 126 (290)
T ss_pred ---HHHHHHhc----ccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 11111111 112221111111222345689999999999987744321 1222333444578889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|++|.||+++.+|.++|+|||++..+................+..|+.+.. ..+..+...|+||+|+.++++++
T Consensus 127 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~~Dv~slG~~l~~ll~ 203 (290)
T cd05613 127 IYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRG---GDGGHDKAVDWWSMGVLMYELLT 203 (290)
T ss_pred eccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccC---CCCCCCccccHHHHHHHHHHHhc
Confidence 999999999999999999999999998765432111111111122333443211 01234677999999999999997
Q ss_pred Hh
Q 011399 370 DA 371 (487)
Q Consensus 370 ~~ 371 (487)
+.
T Consensus 204 g~ 205 (290)
T cd05613 204 GA 205 (290)
T ss_pred CC
Confidence 43
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-22 Score=198.27 Aligned_cols=141 Identities=18% Similarity=0.216 Sum_probs=96.4
Q ss_pred CCCceEEEeecCCCCcCcHHHHHhcC----------C--CHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEE
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIESQG----------L--KVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLA 308 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~----------~--~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~ 308 (487)
....+++|||++|++|.++....... . .....+..++..++.++|+.|++|+|+||+||+++.++.++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~ 170 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIK 170 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEE
Confidence 45678999999999998875432111 1 12344567788899999999999999999999999999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 011399 309 FLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (487)
Q Consensus 309 l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (487)
|+|||++..+.........+.. ...+..++++....+..+.+.|+||+|+.++++++.....++...+...++
T Consensus 171 l~dfg~~~~~~~~~~~~~~~~~----~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~ 243 (296)
T cd05095 171 IADFGMSRNLYSGDYYRIQGRA----VLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVI 243 (296)
T ss_pred eccCcccccccCCcceeccCcC----cCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHH
Confidence 9999999876432111111100 001222333333456668899999999999999975544555555544433
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.7e-22 Score=195.73 Aligned_cols=281 Identities=18% Similarity=0.192 Sum_probs=156.4
Q ss_pred cccccccccEEEEEEEcc--CCcEEEEEEecCChH------HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY--SGQIVAVKVQRPGIE------EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~--~g~~VAVKv~~p~~~------~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.||+|++|.||+|.... +|+.||+|+..+... .....++.+++ ...|++++.+.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~----------~l~h~~i~~~~~------ 69 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLR----------ELKHENVVSLVE------ 69 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHH----------hcCCCCccceEE------
Confidence 569999999999999987 789999999876421 11111111111 112333333322
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecC-CCCceEEEeecCCCCcCcHHHHHhc----CCC--HHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQ----GLK--VLDLVNTGIQ 278 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~----~~~--~~~~~~~~i~ 278 (487)
.+.+. ....++||||+++ ++.+....... ... ....+..++.
T Consensus 70 ------------------------------~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 118 (316)
T cd07842 70 ------------------------------VFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQIL 118 (316)
T ss_pred ------------------------------EEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHH
Confidence 11111 1456899999987 44443221111 122 3344567888
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcC----CCcEEEEecCCCCCCCHHHHHHH--HHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATP----EGKLAFLDFGMMSETPEEARFAI--IGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~----~g~i~l~DFGla~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
.++.|+|+.|++|+|+||.||+++. +|.++|+|||++..+........ ........+..||.+. .....+
T Consensus 119 ~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~ 194 (316)
T cd07842 119 NGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLL----GARHYT 194 (316)
T ss_pred HHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHh----CCCCCC
Confidence 8999999999999999999999999 89999999999887643321100 0011112233444321 112346
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCcHHH------HHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhh-hhhCCCCC
Q 011399 353 PDVDVTPIVPALRNFFDDALNSSVSELNFKT------IVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLA-LYADPNFK 425 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~-~~ldP~~~ 425 (487)
...|+||+|+.+++++++.. ++....... -...+..++.......+...... ..+....... ....+.+.
T Consensus 195 ~~~Dv~slG~~l~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd07842 195 KAIDIWAIGCIFAELLTLEP--IFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDI-KKMPEYDTLMKDFKTKTYP 271 (316)
T ss_pred cHHHHHHHHHHHHHHHhcCC--CCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHH-hhcccchhhhhhccCCCCC
Confidence 77999999999999997532 222211100 00111112211111111111100 0000000000 00001111
Q ss_pred hHHhHhHHHHHHhc--cCCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 426 VLAASYPYFAKRLL--TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 426 ~~~~~~p~~~~~l~--~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
. ..+..... ...++...+.+.+||..||..|.+..+.+.|+||
T Consensus 272 ~-----~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 272 S-----NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred C-----ccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 0 00111111 2567899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=191.25 Aligned_cols=275 Identities=17% Similarity=0.186 Sum_probs=163.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcc-cCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDII-TTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||+|++|.||+|+...+|+.|+||........ ..+....+.+. .+.... |+++..+.+.+..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~----~l~~~~~h~~i~~~~~~~~~--------- 69 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVK----SLRKLNEHPNIVKLKEVFRE--------- 69 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHH----HHHhccCCCCchhHHHHhhc---------
Confidence 5699999999999999878999999987643221 01111112211 112233 6677766665432
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
....++||||+ ++++.+...... ...+. ...+..++..++.++|++|+
T Consensus 70 ----------------------------~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i 120 (283)
T cd07830 70 ----------------------------NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF 120 (283)
T ss_pred ----------------------------CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 24568999999 667766543322 12333 33445678889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|++|+||++++++.++|+|||++..+...... ........+..||.+. .....+.+.|+||+|+.++++++
T Consensus 121 ~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~aPE~~~----~~~~~~~~~Di~s~G~~l~el~~ 194 (283)
T cd07830 121 FHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY--TDYVSTRWYRAPEILL----RSTSYSSPVDIWALGCIMAELYT 194 (283)
T ss_pred ccCCCChhhEEEcCCCCEEEeecccceeccCCCCc--CCCCCcccccCceeee----cCcCcCCccchhhHHHHHHHHHh
Confidence 99999999999999999999999999876542110 0001111122233221 12334778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+.......+...+. ...+..+. ....+. ...+..+. ......+ .......++..++.
T Consensus 195 g~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~---~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~l 259 (283)
T cd07830 195 LR--PLFPGSSEIDQLYKICSVLG---TPTKQDWP----EGYKLA---SKLGFRFP--QFAPTSL-HQLIPNASPEAIDL 259 (283)
T ss_pred CC--CccCCCChHHHHHHHHHhcC---CCChhhhh----hHhhhh---cccccccc--ccccccH-HHHcccCCHHHHHH
Confidence 53 33333332222222222211 11111110 000000 00111100 0000111 12222347889999
Q ss_pred HHHHHhhcCcccccccchhhcccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.+|+..||..||+..+.+.|+||
T Consensus 260 i~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 260 IKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred HHHhcccCcccCCCHHHHhhCCCC
Confidence 999999999999999999999987
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.5e-22 Score=189.39 Aligned_cols=248 Identities=14% Similarity=0.124 Sum_probs=154.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+++...+|+.||+|......... .. .+.+......+....|+++.++.+
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~--~~---~~~~~~e~~~l~~l~~~~i~~~~~-------------- 66 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP--KE---REESRKEVAVLSNMKHPNIVQYQE-------------- 66 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh--HH---HHHHHHHHHHHHhCCCCCeeeeEe--------------
Confidence 67999999999999998899999999875221000 00 000000000011111222222221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~giv 290 (487)
+....+..++||||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 67 -----------------------~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (256)
T cd08218 67 -----------------------SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKIL 123 (256)
T ss_pred -----------------------eecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 1223456789999999999987644322 123333 33456788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|++|.||+++.++.++++|||++..+....... . ...+.+..++++....+..+.+.|+||+|+.+++++++
T Consensus 124 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~--~----~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g 197 (256)
T cd08218 124 HRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA--R----TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTL 197 (256)
T ss_pred cCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh--h----hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcC
Confidence 99999999999999999999999998765432110 0 01112223334444445557789999999999999874
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+.......+. ....|. .....++.+++.+
T Consensus 198 ~--~~~~~~~~~~~~~~~~----------------------------~~~~~~--------------~~~~~~~~~~~li 233 (256)
T cd08218 198 K--HAFEAGNMKNLVLKII----------------------------RGSYPP--------------VSSHYSYDLRNLV 233 (256)
T ss_pred C--CCccCCCHHHHHHHHh----------------------------cCCCCC--------------CcccCCHHHHHHH
Confidence 3 2332222221111110 000010 0113467788899
Q ss_pred HHHHhhcCcccccccchhhcccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+||.++|..|++..+.+.|+||
T Consensus 234 ~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 234 SQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHhhCChhhCcCHHHHhhCcCC
Confidence 99999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-22 Score=196.19 Aligned_cols=252 Identities=18% Similarity=0.197 Sum_probs=151.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChH--HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE--EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~--~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|++|.||+|.+..+|+.||+|+..+... ..+..++.+++.+. .|+|++.+++
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~---------~h~~i~~~~~------------ 82 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS---------DHPNVVKFYG------------ 82 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh---------cCCCeeeeee------------
Confidence 679999999999999988999999998764311 11111111111110 1222222221
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeee----cCCCCceEEEeecCCCCcCcHHHHH---hcCCC--HHHHHHHHHHHHHH
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFW----DYTSGKVLTMEWVEGVKLNEQVAIE---SQGLK--VLDLVNTGIQCSLR 282 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~----~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~--~~~~~~~~i~~~l~ 282 (487)
.+. ......++||||++|++|.++.... ....+ ....+..++..++.
T Consensus 83 ------------------------~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ 138 (286)
T cd06638 83 ------------------------MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ 138 (286)
T ss_pred ------------------------eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence 111 1123468999999999998764321 11122 23345567888999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
|+|+.|++|+|+||+||+++.+|.++|+|||++..+....... ........+..||.+.......+..+.+.|+||+|+
T Consensus 139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv 217 (286)
T cd06638 139 HLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRR-NTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGI 217 (286)
T ss_pred HHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCcc-ccccCCCcccChhhhchhhhccccccchhhhhhHHH
Confidence 9999999999999999999999999999999987764321100 000112233445543321111233467899999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+++++++. .++...+..... ..... ..++. ..+| ...
T Consensus 218 i~~el~~g~--~p~~~~~~~~~~---~~~~~----~~~~~----------------~~~~-----------------~~~ 255 (286)
T cd06638 218 TAIELGDGD--PPLADLHPMRAL---FKIPR----NPPPT----------------LHQP-----------------ELW 255 (286)
T ss_pred HHHHHhcCC--CCCCCCchhHHH---hhccc----cCCCc----------------ccCC-----------------CCc
Confidence 999998743 233222111000 00000 00000 0001 112
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+..+++.+.+||..||..|++..+.+.|.||
T Consensus 256 ~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 256 SNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 4567889999999999999999888888876
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-22 Score=196.07 Aligned_cols=190 Identities=18% Similarity=0.166 Sum_probs=121.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|++..+++.||+|+.+....... ..+. .....+....|++++.+.+
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~~~~---~e~~~~~~l~h~~ii~~~~-------------- 73 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF----AVVQ---QEIIMMKDCKHSNIVAYFG-------------- 73 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH----HHHH---HHHHHHHhCCCCCeeeEEE--------------
Confidence 679999999999999988899999999875432211 0000 0000001111333222221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
........+++|||++|++|.++..... ........+..++..++.|+|+.|++|+
T Consensus 74 -----------------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 130 (267)
T cd06645 74 -----------------------SYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHR 130 (267)
T ss_pred -----------------------EEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 1122355689999999999988743221 2233344555778889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+||+||+++.+|.++|+|||++..+...... .........+..||.+.. ...+..+.++|+||+|+.++++++.
T Consensus 131 dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~--~~~~~~~~~~DvwSlG~il~~l~~~ 205 (267)
T cd06645 131 DIKGANILLTDNGHVKLADFGVSAQITATIAK-RKSFIGTPYWMAPEVAAV--ERKGGYNQLCDIWAVGITAIELAEL 205 (267)
T ss_pred CCCHHHEEECCCCCEEECcceeeeEccCcccc-cccccCcccccChhhhcc--ccCCCCCchhhhHHHHHHHHHHhcC
Confidence 99999999999999999999998765432110 001111122233443211 0133457789999999999998874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.6e-22 Score=195.36 Aligned_cols=252 Identities=19% Similarity=0.160 Sum_probs=156.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.|++|+.+-..... . +. +.+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~------------------------------~~------~~~ 65 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR---R------------------------------EL------LFN 65 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH---H------------------------------HH------HHH
Confidence 78999999999999988789999999875221110 0 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|...+.++ +++.+.-+.-+.......+++|||++|++|.+..............+..++..++.++|++|++|+|
T Consensus 66 e~~~l~~~-----~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 140 (285)
T cd06648 66 EVVIMRDY-----QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRD 140 (285)
T ss_pred HHHHHHHc-----CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 11111111 1222221111222346678999999999998875442222233344567788899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
++|.||+++.+|.++|+|||++..+....... .. ..+.+..++++....+..+.+.|+||+|+.+++++++.
T Consensus 141 l~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~-~~-----~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~-- 212 (285)
T cd06648 141 IKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR-KS-----LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE-- 212 (285)
T ss_pred CChhhEEEcCCCcEEEcccccchhhccCCccc-cc-----ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCC--
Confidence 99999999999999999999887654321110 00 11122233333333444577899999999999999743
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
.++...+....... + .....|.... ....++.+++.+.+|
T Consensus 213 ~p~~~~~~~~~~~~----------------------~------~~~~~~~~~~------------~~~~~~~l~~li~~~ 252 (285)
T cd06648 213 PPYFNEPPLQAMKR----------------------I------RDNLPPKLKN------------LHKVSPRLRSFLDRM 252 (285)
T ss_pred CCCcCCCHHHHHHH----------------------H------HhcCCCCCcc------------cccCCHHHHHHHHHH
Confidence 23222111100000 0 0000011000 012457788999999
Q ss_pred HhhcCcccccccchhhcccccccc
Q 011399 454 LFKDGRFRHVLYSPFTINLVDFEF 477 (487)
Q Consensus 454 L~~d~~~r~~~~~~~~~~~~~~~~ 477 (487)
|..+|+.|++..+-+.|+||..-.
T Consensus 253 l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 253 LVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred cccChhhCcCHHHHccCcccccCC
Confidence 999999999999999999996543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=179.86 Aligned_cols=164 Identities=20% Similarity=0.224 Sum_probs=106.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||+|++|+||+|.+. +|+.||||+++++.......| ..+....++.. .....++.++...+ ...
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~---------~~~ 68 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRD-RYVSGEFRFRH---GYCKSNPRKMVRTW---------AEK 68 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHH-HhhcCCchhhc---cccCCCHHHHHHHH---------HHH
Confidence 57999999999999997 999999999997643221111 11000000000 00012333333322 235
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHH-HHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQL-LEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~l-h~~giv 290 (487)
|.+++.++... .+..|.++. ....+|||||++|+++.... ....+.+... .+..++..++.++ |+.|++
T Consensus 69 E~~~l~~l~~~-----~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~gii 140 (190)
T cd05147 69 EMRNLKRLVTA-----GIPCPEPIL--LKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCRLV 140 (190)
T ss_pred HHHHHHHHHHC-----CCCCCcEEE--ecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 77788887642 334455543 34458999999997765432 2223444433 3456677899999 699999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
||||||+|||++ +|+++|+|||++.....
T Consensus 141 HrDlkP~NIli~-~~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 141 HADLSEYNLLYH-DGKLYIIDVSQSVEHDH 169 (190)
T ss_pred cCCCCHHHEEEE-CCcEEEEEccccccCCC
Confidence 999999999998 58999999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-22 Score=205.12 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 272 ~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
.+..++..++.|+|+.|++|||+||.|||+++++.++|+|||++..+.........+.. ...+..++++....+..
T Consensus 216 ~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~----~~~~~y~aPE~~~~~~~ 291 (374)
T cd05106 216 RFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA----RLPVKWMAPESIFDCVY 291 (374)
T ss_pred HHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC----CCccceeCHHHhcCCCC
Confidence 34577888999999999999999999999999999999999999876433211111110 01112233333344566
Q ss_pred CCCCCcchHHHHHHHHHH
Q 011399 352 SPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~ 369 (487)
+++.|+||+|+.++++++
T Consensus 292 ~~~~DvwSlGvil~ellt 309 (374)
T cd05106 292 TVQSDVWSYGILLWEIFS 309 (374)
T ss_pred CccccHHHHHHHHHHHHh
Confidence 889999999999999986
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.4e-22 Score=191.77 Aligned_cols=254 Identities=18% Similarity=0.141 Sum_probs=156.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.|++|+.+..... . ...+.+....+.+....|+++..+++.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~---~~~~~~~~e~~~~~~l~~~~i~~~~~~------------- 67 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--P---KTIKEIADEMKVLELLKHPNLVKYYGV------------- 67 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--h---HHHHHHHHHHHHHHhCCCCChhheeee-------------
Confidence 6799999999999999878999999998754322 0 011111111111112223333333221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
....+..++||||++|++|.++..... ........+..++..++.++|+.|++|+
T Consensus 68 ------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~ 123 (264)
T cd06626 68 ------------------------EVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHR 123 (264)
T ss_pred ------------------------EecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 112355689999999999988754321 2334444556778889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC---CCCCCCcchHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF---LSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~Di~sl~~~l~~~~~ 369 (487)
|++|+||+++.++.++|+|||++..+......... .. ....+.+..++++....+. .+.+.|+|++|+.+++++.
T Consensus 124 dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~-~~-~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~ 201 (264)
T cd06626 124 DIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE-EV-QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT 201 (264)
T ss_pred CCCHHHEEECCCCCEEEcccccccccCCCCCcccc-cc-cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHh
Confidence 99999999999999999999998876543211000 00 0011112222233222222 5678999999999999997
Q ss_pred HhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 370 DALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 370 ~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
+. .|+...+ -......+. .. ..|.+.. ....++.+++
T Consensus 202 g~--~pf~~~~~~~~~~~~~~---~~-------------------------~~~~~~~------------~~~~~~~~~~ 239 (264)
T cd06626 202 GK--RPWSELDNEFQIMFHVG---AG-------------------------HKPPIPD------------SLQLSPEGKD 239 (264)
T ss_pred CC--CCccCCcchHHHHHHHh---cC-------------------------CCCCCCc------------ccccCHHHHH
Confidence 43 3433221 111111110 00 0111100 0123667788
Q ss_pred HHHHHHhhcCcccccccchhhcccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+.+||..||..|.+..+-+.|+|+
T Consensus 240 li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 240 FLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHccCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999898885
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-22 Score=198.37 Aligned_cols=141 Identities=18% Similarity=0.207 Sum_probs=95.3
Q ss_pred CCCceEEEeecCCCCcCcHHHHHhc-----------CCCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcE
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIESQ-----------GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL 307 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~-----------~~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i 307 (487)
....++||||++|++|.++...... ..+. ...+..++..++.|+|..|++|+|+||+||+++.++.+
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~ 168 (295)
T cd05097 89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTI 168 (295)
T ss_pred CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcE
Confidence 4567899999999999887543210 1122 22345678889999999999999999999999999999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 011399 308 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (487)
Q Consensus 308 ~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (487)
+|+|||++..+.........+ ........++++....+..+.+.|+||+|+.++++++.....++...+...++
T Consensus 169 kl~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~ 242 (295)
T cd05097 169 KIADFGMSRNLYSGDYYRIQG----RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVI 242 (295)
T ss_pred EecccccccccccCcceeccC----cCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHH
Confidence 999999987654321110011 00111223334443445568899999999999999875444555554444433
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=204.33 Aligned_cols=202 Identities=19% Similarity=0.203 Sum_probs=119.8
Q ss_pred CCceEEEeecCCCCcCcHHHHHhc-------------------------CCCHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIESQ-------------------------GLKVLDLVNTGIQCSLRQLLEYGYFHADPHP 296 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~-------------------------~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp 296 (487)
...+|||||+++++|.++...... ..+....+..++..++.|+|..|++|||+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 456899999999999876432110 0112334456777899999999999999999
Q ss_pred CCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHH------------------HHHHHcCCCCCCCCc
Q 011399 297 GNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMA------------------RDYYALDFLSPDVDV 357 (487)
Q Consensus 297 ~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~------------------~~~~~~g~~~~~~Di 357 (487)
+|||++.++.++|+|||++..+...... ...++ .+..+..||.+. ...+..| ..+..|+
T Consensus 338 ~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~-~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg-~~~~~Dv 415 (507)
T PLN03224 338 ENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGM-LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYG-RPDLFDS 415 (507)
T ss_pred HhEEECCCCcEEEEeCcCccccccCCccCccccC-CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcC-CCCccch
Confidence 9999999999999999998765332110 00010 011222333221 0011111 1335799
Q ss_pred chHHHHHHHHHHHhccCCCCcC-cHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSEL-NFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
||+|+.+++|+.+... ++... .+....... ..... ..+.. .....++.
T Consensus 416 wSlGvil~em~~~~l~-p~~~~~~f~~~~~~~-------~~~~~-----~~r~~-------~~~~~~~~----------- 464 (507)
T PLN03224 416 YTAGVLLMQMCVPELR-PVANIRLFNTELRQY-------DNDLN-----RWRMY-------KGQKYDFS----------- 464 (507)
T ss_pred hhHHHHHHHHHhCCCC-CccchhhhhhHHhhc-------cchHH-----HHHhh-------cccCCCcc-----------
Confidence 9999999998874332 11111 111111000 00000 00000 00111221
Q ss_pred HhccCCCHHHHHHHHHHHhhcC---cccccccchhhcccccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDG---RFRHVLYSPFTINLVDFEF 477 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~---~~r~~~~~~~~~~~~~~~~ 477 (487)
.....++..++.+.++|.+++ ..|++..+++.|+||.-||
T Consensus 465 -~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~~ 507 (507)
T PLN03224 465 -LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPEF 507 (507)
T ss_pred -cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCCC
Confidence 123457889999999999765 6899999999999998775
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=190.77 Aligned_cols=270 Identities=19% Similarity=0.195 Sum_probs=165.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|+...+|+.||+|+......+ ....++..++ ...|+++..+.+.+..
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~----------~~~~~~i~~~~~~~~~----- 69 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLK----------ELKHPNIVKLLDVIHT----- 69 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHH----------hcCCCCHHHHHhhhhc-----
Confidence 5699999999999999988999999998764311 1111222211 2236776666654321
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE 286 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~ 286 (487)
....++||||+++ +|.++........+.. ..+..++..++.++|.
T Consensus 70 --------------------------------~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 116 (282)
T cd07829 70 --------------------------------ERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHS 116 (282)
T ss_pred --------------------------------CCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1456799999986 7877654432233333 3445677889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~ 365 (487)
.|++|+|++|.||+++.+|.++|+|||.+......... .........+..||.+ ..+ ..+++.|+|++|+.++
T Consensus 117 ~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~-----~~~~~~~~~~Dv~slG~~l~ 190 (282)
T cd07829 117 HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT-YTHEVVTLWYRAPEIL-----LGSKHYSTAVDIWSVGCIFA 190 (282)
T ss_pred CCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc-cCccccCcCcCChHHh-----cCCcCCCccccHHHHHHHHH
Confidence 99999999999999999999999999998876443211 1111111223344433 222 5578899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++ ..++...+.......+...+. ...+..+. .+ ..+. ..+..+..... .+ ........++.
T Consensus 191 ~l~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~---~~~~-~~~~~~~~~~~-~~--~~~~~~~~~~~ 254 (282)
T cd07829 191 EMITG--KPLFPGDSEIDQLFKIFQILG---TPTEESWP----GV---TKLP-DYKPTFPKFPP-KD--LEKVLPRLDPE 254 (282)
T ss_pred HHHhC--CCCCCCccHHHHHHHHHHHhC---CCcHHHHH----hh---cccc-cccccccccCc-cc--hHHhcccccHH
Confidence 99985 334433332222222222111 11111110 00 0000 00011100000 00 01112234788
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+++.+.+||..||..|.+..+.+.|+||
T Consensus 255 ~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 255 GIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred HHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-22 Score=220.94 Aligned_cols=250 Identities=13% Similarity=0.140 Sum_probs=148.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+++.||+|++.......- .. ..+...+..+..+.|++++.+++
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~--~~---~~~~~EI~IL~~L~HPNIVrl~d-------------- 79 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKER--EK---SQLVIEVNVMRELKHKNIVRYID-------------- 79 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHH--HH---HHHHHHHHHHHHcCCCCcCeEEE--------------
Confidence 679999999999999998999999999864311100 00 00000000111112333322221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHHHh---cCCCH--HHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIES---QGLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
.+. ......+|||||++|++|.+++.... ..++. ...+..+++.+|.|||..
T Consensus 80 ----------------------~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~ 137 (1021)
T PTZ00266 80 ----------------------RFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL 137 (1021)
T ss_pred ----------------------EEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 111 12244689999999999988754321 22333 334557888899999985
Q ss_pred -------CccccCCCCCCeEEcCC-----------------CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Q 011399 288 -------GYFHADPHPGNLLATPE-----------------GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMAR 343 (487)
Q Consensus 288 -------givH~Dlkp~Nili~~~-----------------g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (487)
+|+|+||||+|||++.+ +.++|+|||++..+...... .....+..+..||.+..
T Consensus 138 g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~--~s~vGTp~YmAPEvL~g 215 (1021)
T PTZ00266 138 KDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMA--HSCVGTPYYWSPELLLH 215 (1021)
T ss_pred ccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccc--cccCCCccccCHHHHhc
Confidence 49999999999999642 34899999999876433111 01111222333443311
Q ss_pred HHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcC-cHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCC
Q 011399 344 DYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSEL-NFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADP 422 (487)
Q Consensus 344 ~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP 422 (487)
.....++++|+|||||++++++++. .|+... ++..++..+ . ..|
T Consensus 216 ---e~~~~s~KSDVWSLG~ILYELLTGk--~PF~~~~~~~qli~~l----k--------------------------~~p 260 (1021)
T PTZ00266 216 ---ETKSYDDKSDMWALGCIIYELCSGK--TPFHKANNFSQLISEL----K--------------------------RGP 260 (1021)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHCC--CCCCcCCcHHHHHHHH----h--------------------------cCC
Confidence 1233577899999999999999843 233221 111111110 0 001
Q ss_pred CCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 423 NFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 423 ~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+. ....++++.+.+..||..+|..|++..+.+.|+|+.
T Consensus 261 ~lp-------------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik 299 (1021)
T PTZ00266 261 DLP-------------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK 299 (1021)
T ss_pred CCC-------------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence 110 012356677788888888888888888888888874
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-22 Score=198.61 Aligned_cols=281 Identities=17% Similarity=0.107 Sum_probs=163.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|+++.+|+.||||+....... ....++.+++ ...|++++.+.+.+...-
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~----------~l~h~~i~~~~~~~~~~~--- 80 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILK----------KLKHPNVVPLIDMAVERP--- 80 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHH----------hcCCCCccchhhheeccc---
Confidence 6799999999999999889999999988543211 1112222222 234777777665432110
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh--cCCCHHHHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
. .........++||||+++ ++........ ........+..++..++.|+|.
T Consensus 81 ---------------------~-----~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 133 (311)
T cd07866 81 ---------------------D-----KSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE 133 (311)
T ss_pred ---------------------c-----cccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 000112345799999986 3433322111 2233344556788889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH----------HHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI----------IGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
.|++|+|+||+||+++++|.++|+|||+++.......... ........+..||.+. .....+.+.|
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~D 209 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLL----GERRYTTAVD 209 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhh----CCCccCchhH
Confidence 9999999999999999999999999999986543211000 0001112233344331 1123467899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .++...+.......+..... ..++......+.+... +.........+-+..
T Consensus 210 v~slG~il~el~~g~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 275 (311)
T cd07866 210 IWGIGCVFAEMFTRR--PILQGKSDIDQLHLIFKLCG----TPTEETWPGWRSLPGC--------EGVHSFTNYPRTLEE 275 (311)
T ss_pred hHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHHHhC----CCChhhchhhhhcccc--------cccccCCCCCccHHH
Confidence 999999999999853 34443333222222222211 1111110001111000 000000011111112
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.....++..++.+.+||..||.+|++..+.+.|+||
T Consensus 276 -~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 276 -RFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred -HcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 223456889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-22 Score=196.71 Aligned_cols=188 Identities=18% Similarity=0.161 Sum_probs=120.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+...+|+.||+|+.+....... .. +.+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~----~~-----------------------------------~~~ 55 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF----SL-----------------------------------IQQ 55 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH----HH-----------------------------------HHH
Confidence 679999999999999988999999999874422110 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|+..+.++ +++.+.-..-+.......++||||++|++|.++..... .+......+..++..++.++|+.|++|+
T Consensus 56 e~~~l~~~-----~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 130 (267)
T cd06646 56 EIFMVKEC-----KHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHR 130 (267)
T ss_pred HHHHHHhc-----CCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 11111111 11211111111122355689999999999988743221 1223334455778889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|++|+||+++.+|.++|+|||++..+..... ....+ ...+..||.+... ..+..+.+.|+||+|+.+++++++
T Consensus 131 dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~---~~~y~~PE~~~~~--~~~~~~~~~Dvws~G~il~el~~g 205 (267)
T cd06646 131 DIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIG---TPYWMAPEVAAVE--KNGGYNQLCDIWAVGITAIELAEL 205 (267)
T ss_pred CCCHHHEEECCCCCEEECcCccceeecccccccCcccc---CccccCHhHcccc--cCCCCcchhhHHHHHHHHHHHHhC
Confidence 9999999999999999999999987643211 11111 1223334432110 122245678999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-22 Score=187.84 Aligned_cols=248 Identities=19% Similarity=0.220 Sum_probs=141.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
.-+|+|+-|+|++++.+++|...|||..+..-... .--++|. .+|...
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nke--e~kRILm------------------------------Dldvv~ 145 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKE--ENKRILM------------------------------DLDVVL 145 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHH--HHHHHHH------------------------------hhhHHh
Confidence 45999999999999999999999999987432110 0011111 111110
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHH---HHHHHHHHH-HC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTG---IQCSLRQLL-EY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~---i~~~l~~lh-~~ 287 (487)
..+..-+|.+.| .-..+..++.||.|.. -...+...-..+ -+.+++... +..||.||- .+
T Consensus 146 ------------~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~p-iPE~ilGk~tva~v~AL~YLKeKH 211 (391)
T KOG0983|consen 146 ------------KSHDCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIKGP-IPERILGKMTVAIVKALYYLKEKH 211 (391)
T ss_pred ------------hccCCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhcCC-chHHhhhhhHHHHHHHHHHHHHhc
Confidence 001111111211 1123444577777643 223332222222 233444333 445777776 58
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|++|||+||+|||++..|.|||+|||+++++.++...+ -+|...+| .||.+... ...-++-..|+||+|.++.|
T Consensus 212 ~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YM---aPERidp~--~~~kYDiRaDVWSlGITlve 286 (391)
T KOG0983|consen 212 GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYM---APERIDPP--DKPKYDIRADVWSLGITLVE 286 (391)
T ss_pred ceeecccCccceEEccCCCEEeecccccceeecccccccccCCcccc---CccccCCC--CCCccchhhhhhhhccchhh
Confidence 99999999999999999999999999999987653211 12222222 23332110 01111334789999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
+.++.++.+....+|.. +.+++.+.|..+|+.. ..||..
T Consensus 287 LaTg~yPy~~c~tdFe~----ltkvln~ePP~L~~~~-------------------------------------gFSp~F 325 (391)
T KOG0983|consen 287 LATGQYPYKGCKTDFEV----LTKVLNEEPPLLPGHM-------------------------------------GFSPDF 325 (391)
T ss_pred hhcccCCCCCCCccHHH----HHHHHhcCCCCCCccc-------------------------------------CcCHHH
Confidence 99877665555555542 4444444443333320 145666
Q ss_pred HHHHHHHHhhcCcccccccchhhcccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
++++..||++|++.|..--+-+.|+|.
T Consensus 326 ~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi 352 (391)
T KOG0983|consen 326 QSFVKDCLTKDHRKRPKYNKLLEHPFI 352 (391)
T ss_pred HHHHHHHhhcCcccCcchHHHhcCcce
Confidence 667777777777776666666666655
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.2e-22 Score=191.81 Aligned_cols=198 Identities=17% Similarity=0.147 Sum_probs=128.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH--HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE--AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~--~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|++|.||+|..+.+++.||+|+...+... .+..+++.+ ....|++++.+.+.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l----------~~l~h~~i~~~~~~----------- 70 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----------KEIKHPNLVQLLGV----------- 70 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHH----------HhCCCCChhheEEE-----------
Confidence 6799999999999999888999999998654211 011111111 11224444433321
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
.......+++|||++|++|.+...... ...+.. ..+..++..++.++|..|
T Consensus 71 --------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 124 (263)
T cd05052 71 --------------------------CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 124 (263)
T ss_pred --------------------------EcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 112355689999999999988754322 223333 334577888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|+||.||++++++.++|+|||++...................+..|| ....+..++..|+||+|+.+++++
T Consensus 125 i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Dv~slG~il~el~ 199 (263)
T cd05052 125 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-----SLAYNKFSIKSDVWAFGVLLWEIA 199 (263)
T ss_pred EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHH-----HhccCCCCchhHHHHHHHHHHHHH
Confidence 999999999999999999999999999876543211111100011223333 333445677899999999999999
Q ss_pred HHhccCCCCcCcHHHH
Q 011399 369 DDALNSSVSELNFKTI 384 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~ 384 (487)
+. ...++...+...+
T Consensus 200 t~-g~~p~~~~~~~~~ 214 (263)
T cd05052 200 TY-GMSPYPGIDLSQV 214 (263)
T ss_pred cC-CCCCCCCCCHHHH
Confidence 71 2234444444433
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-23 Score=208.21 Aligned_cols=220 Identities=16% Similarity=0.146 Sum_probs=150.0
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.-.+|.|.+|.||.|++..+....|||.+...-. +.. +.+.+|+.+.
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds-------r~~--------------------------QPLhEEIaLH 626 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS-------REV--------------------------QPLHEEIALH 626 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccc-------hhh--------------------------ccHHHHHHHH
Confidence 3579999999999999998999999999853211 111 1122222222
Q ss_pred HH--HHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc----CCCHHHHHHHHHHHHHHHHHH
Q 011399 213 QE--GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ----GLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 213 ~E--a~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~----~~~~~~~~~~~i~~~l~~lh~ 286 (487)
.. ++|+.++-..++.+..+ -|.||-++||+|+++...+-. ++....++.+||..+|+|+|+
T Consensus 627 ~~LrHkNIVrYLGs~senGf~-------------kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe 693 (1226)
T KOG4279|consen 627 STLRHKNIVRYLGSVSENGFF-------------KIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE 693 (1226)
T ss_pred HHHhhHhHHHHhhccCCCCeE-------------EEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh
Confidence 21 23444444444444333 389999999999998654322 345667888999999999999
Q ss_pred CCccccCCCCCCeEEc-CCCcEEEEecCCCCCCCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHcCC--CCCCCCcchHH
Q 011399 287 YGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPE--EARFAIIGHVVHMVNRDYEAMARDYYALDF--LSPDVDVTPIV 361 (487)
Q Consensus 287 ~givH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~Di~sl~ 361 (487)
+.|+|||||-.|+||+ -.|-+||.|||.++++.. ...+++.|+..+| +++++..|. +++..||||||
T Consensus 694 n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYM--------APEvIDqG~RGYG~aADIWS~G 765 (1226)
T KOG4279|consen 694 NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM--------APEVIDQGPRGYGKAADIWSFG 765 (1226)
T ss_pred cceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhh--------ChHhhccCCcCCCchhhhhhcc
Confidence 9999999999999998 578999999999988742 2345566665544 455555543 36788999999
Q ss_pred HHHHHHHHHhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 011399 362 PALRNFFDDALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (487)
|++-||.++ ..|+-+.. -...+..+ .+++....+|.+++.-.|.+
T Consensus 766 CT~vEMATG--rPPF~ElgspqAAMFkV--GmyKvHP~iPeelsaeak~F 811 (1226)
T KOG4279|consen 766 CTMVEMATG--RPPFVELGSPQAAMFKV--GMYKVHPPIPEELSAEAKNF 811 (1226)
T ss_pred ceeEeeccC--CCCeeecCChhHhhhhh--cceecCCCCcHHHHHHHHHH
Confidence 999998874 34554433 23333222 35666677887766555555
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-22 Score=193.32 Aligned_cols=202 Identities=15% Similarity=0.195 Sum_probs=125.4
Q ss_pred cccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|.++ ..+..||+|..+........ . +
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~--~------------------------------------~ 52 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQR--R------------------------------------G 52 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHH--H------------------------------------H
Confidence 67999999999999875 34679999998754221110 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
+..|...+.++ ++++ +.+... .......++||||++|++|.++.......... ...+..++..++.|+|+.
T Consensus 53 ~~~e~~~l~~l-----~h~~iv~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~ 126 (266)
T cd05064 53 FLAEALTLGQF-----DHSNIVRLEGV-ITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM 126 (266)
T ss_pred HHHHHHHHhcC-----CCCCcCeEEEE-EecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11222222111 1111 111111 12345678999999999998875443223333 344557788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|||+||.||+++.++.++++|||.+...................+..|| ....+..+.++|+||+|+.++++
T Consensus 127 ~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~~l~el 201 (266)
T cd05064 127 GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPE-----AIQYHHFSSASDVWSFGIVMWEV 201 (266)
T ss_pred CEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHH-----HHhhCCccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999987664322110000000011223344 33445567889999999999997
Q ss_pred HHHhccCCCCcCcHHHHH
Q 011399 368 FDDALNSSVSELNFKTIV 385 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~ 385 (487)
+.. ...|+...+...+.
T Consensus 202 l~~-g~~p~~~~~~~~~~ 218 (266)
T cd05064 202 MSY-GERPYWDMSGQDVI 218 (266)
T ss_pred hcC-CCCCcCcCCHHHHH
Confidence 742 22455555444433
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-23 Score=194.99 Aligned_cols=281 Identities=17% Similarity=0.262 Sum_probs=177.4
Q ss_pred ccCCcccccccccEEEEEEEccCCcEEEEEEec-CC----hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 130 SISPSPIAAASLGQVYKAQLKYSGQIVAVKVQR-PG----IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 130 ~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~-p~----~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
+.+-.|+|.|.- .|..|-+...+++||+|..- |- ..+...+++.++. ...|.|++.+...|.-+
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~----------~v~~~nii~l~n~ftP~ 87 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMK----------CVNHKNIISLLNVFTPQ 87 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhh----------hhcccceeeeeeccCcc
Confidence 344488999987 67788887789999999763 31 1112223333332 23477777777665422
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 284 (487)
++.+.+ ...|+|||++++ +|...+..+ ..-.....+..|+.++++++
T Consensus 88 -----------~~l~~~--------------------~e~y~v~e~m~~-nl~~vi~~e-lDH~tis~i~yq~~~~ik~l 134 (369)
T KOG0665|consen 88 -----------KTLEEF--------------------QEVYLVMELMDA-NLCQVILME-LDHETISYILYQMLCGIKHL 134 (369)
T ss_pred -----------ccHHHH--------------------HhHHHHHHhhhh-HHHHHHHHh-cchHHHHHHHHHHHHHHHHH
Confidence 122222 233699999987 777665532 33344566778899999999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
|+.||+|||+||.||++..++.+|++|||+++.-+...+ ++..+....++.|+.+. .+| ..+.+|+||+||.+
T Consensus 135 hs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~--mtpyVvtRyyrapevil----~~~-~ke~vdiwSvGci~ 207 (369)
T KOG0665|consen 135 HSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFM--MTPYVVTRYYRAPEVIL----GMG-YKENVDIWSVGCIM 207 (369)
T ss_pred HhcceeecccCcccceecchhheeeccchhhcccCcccc--cCchhheeeccCchhee----ccC-CcccchhhhhhhHH
Confidence 999999999999999999999999999999987665532 34455566677776643 466 58889999999999
Q ss_pred HHHHHHhccCCCCc--CcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHH-HHH----hhh---hhCCCCChHHhHhHHH
Q 011399 365 RNFFDDALNSSVSE--LNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTV-LEG----LAL---YADPNFKVLAASYPYF 434 (487)
Q Consensus 365 ~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~-leg----~~~---~ldP~~~~~~~~~p~~ 434 (487)
.|++.+..-.+... ..+..+++.+|. .-|.++..+.-+..+ .+. .+. .+-|+......
T Consensus 208 gEli~~~Vlf~g~d~idQ~~ki~~~lgt-------pd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~----- 275 (369)
T KOG0665|consen 208 GELILGTVLFPGKDHIDQWNKIIEQLGT-------PDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVV----- 275 (369)
T ss_pred HHHhhceEEecCchHHHHHHHHHHHhcC-------CCHHHHHHhhHHHHHHhhcChHhhccchhhhCCccccccc-----
Confidence 99997533222111 123333433332 233333222222211 110 000 11122111100
Q ss_pred HHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 435 AKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 435 ~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+. .......+|+.+.+||.-||..|.+.-.++.|||+.
T Consensus 276 ~e~-~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 276 LEG-SKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred ccC-CccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 000 012345789999999999999999999999999996
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.1e-22 Score=191.43 Aligned_cols=261 Identities=19% Similarity=0.182 Sum_probs=157.0
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHH--HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE--AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~--~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
|+.. ++||+|++|.||+|..+.+++.|++|+....... .+..++.+++.+. .|++++++++.+...
T Consensus 8 y~~~--~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~---------~h~~i~~~~~~~~~~- 75 (275)
T cd06608 8 FELV--EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS---------NHPNIATFYGAFIKK- 75 (275)
T ss_pred eehe--eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc---------CCCChheEEEEEEec-
Confidence 4444 7899999999999999888999999998754221 1111111111110 133333322211000
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCC--HHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLK--VLDLVNTGIQCS 280 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~--~~~~~~~~i~~~ 280 (487)
.........+++|||++|++|.++..... ...+ ....+..++..+
T Consensus 76 ------------------------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~a 125 (275)
T cd06608 76 ------------------------------NPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRG 125 (275)
T ss_pred ------------------------------CCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence 00011234689999999999988754322 2223 334556778889
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
+.++|+.|++|+|++|.||+++.+|.++|+|||++.......... ........+..||.+..........+.+.|+||+
T Consensus 126 l~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 204 (275)
T cd06608 126 LAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRR-NTFIGTPYWMAPEVIACDEQPDASYDARSDVWSL 204 (275)
T ss_pred HHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhh-cCccccccccCHhHhcccccccCCccccccHHHh
Confidence 999999999999999999999999999999999987664332110 0011112233344332111112234667899999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
|+.+++++++. .++...+... .+.... ....+.... ..
T Consensus 205 G~il~~l~~g~--~p~~~~~~~~---~~~~~~-------------------------~~~~~~~~~------------~~ 242 (275)
T cd06608 205 GITAIELADGK--PPLCDMHPMR---ALFKIP-------------------------RNPPPTLKS------------PE 242 (275)
T ss_pred HHHHHHHHhCC--CCccccchHH---HHHHhh-------------------------ccCCCCCCc------------hh
Confidence 99999999753 2332221111 011000 000111100 01
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
..++.+++.+.+||..||+.|.+..+-+.|+|+
T Consensus 243 ~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 243 NWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred hcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 235678889999999999999999999999885
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.3e-22 Score=194.23 Aligned_cols=254 Identities=17% Similarity=0.155 Sum_probs=152.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.+|+|+..+..... ..+ ..
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~----------------------------------~~~------~~ 67 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD----------------------------------EEI------EA 67 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccHH----------------------------------HHH------HH
Confidence 67999999999999998899999999986431100 000 11
Q ss_pred HHHHHHHHHHHhCCCCCe-Eeceeeec----CCCCceEEEeecCCCCcCcHHHHH---hc--CCCHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWD----YTSGKVLTMEWVEGVKLNEQVAIE---SQ--GLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~----~~~~~~LvmE~~~G~~L~~~~~~~---~~--~~~~~~~~~~~i~~~l~~ 283 (487)
|...+.++ .+++++ .+...+.. ..+..++||||++|++|.++.... .. .......+..++..++.+
T Consensus 68 e~~~l~~l----~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 143 (291)
T cd06639 68 EYNILQSL----PNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQH 143 (291)
T ss_pred HHHHHHHh----cCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 11111111 112221 11112111 123578999999999998865421 11 222334455678889999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+|+.|++|+|+||+||+++.++.++|+|||++..+....... ........+..||.+..........+.+.|+||+|+.
T Consensus 144 lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi 222 (291)
T cd06639 144 LHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRR-NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT 222 (291)
T ss_pred HHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccc-cCccCCccccChhhhcCCCCcccccCCccchHHHHHH
Confidence 999999999999999999999999999999988764321110 0001112233444332100000113678999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++. .++...+....+ .... ....|.+.. ....+
T Consensus 223 ~~el~~g~--~p~~~~~~~~~~---~~~~-------------------------~~~~~~~~~------------~~~~~ 260 (291)
T cd06639 223 AIELGDGD--PPLFDMHPVKTL---FKIP-------------------------RNPPPTLLH------------PEKWC 260 (291)
T ss_pred HHHHhhCC--CCCCCCcHHHHH---HHHh-------------------------cCCCCCCCc------------ccccC
Confidence 99998743 233322211111 0000 000011000 01234
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+.+++.+.+|+..||..|++..+.+.|+||.
T Consensus 261 ~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 261 RSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 5678899999999999999999999999984
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-22 Score=193.86 Aligned_cols=189 Identities=16% Similarity=0.194 Sum_probs=120.2
Q ss_pred cccccccccEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|.... +++.||||+.+.........
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------------------- 53 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARK------------------------------------- 53 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHH-------------------------------------
Confidence 679999999999998752 35899999986442221100
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-------------CCC--HHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-------------GLK--VLDLV 273 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-------------~~~--~~~~~ 273 (487)
++.+|++.+.++. ++.+.-..-+.......+++|||++|++|.++...... ..+ ....+
T Consensus 54 -~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 127 (280)
T cd05049 54 -DFEREAELLTNFQ-----HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQI 127 (280)
T ss_pred -HHHHHHHHHHhcC-----CCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHH
Confidence 1122222222221 11111111112223567899999999999887543211 112 22344
Q ss_pred HHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 011399 274 NTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSP 353 (487)
Q Consensus 274 ~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (487)
..++..++.++|..|++|+|+||+||+++.++.++|+|||++..+.........+ .....+..++++.+..+..++
T Consensus 128 ~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~ 203 (280)
T cd05049 128 AVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGG----HTMLPIRWMPPESIMYRKFTT 203 (280)
T ss_pred HHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCC----CCcccceecChhhhccCCcch
Confidence 5678889999999999999999999999999999999999987653221100000 000112334445555566788
Q ss_pred CCCcchHHHHHHHHHH
Q 011399 354 DVDVTPIVPALRNFFD 369 (487)
Q Consensus 354 ~~Di~sl~~~l~~~~~ 369 (487)
++|+||+|+.++++++
T Consensus 204 ~~Di~slG~il~e~~~ 219 (280)
T cd05049 204 ESDVWSFGVVLWEIFT 219 (280)
T ss_pred hhhHHHHHHHHHHHHh
Confidence 8999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.6e-22 Score=195.43 Aligned_cols=256 Identities=20% Similarity=0.181 Sum_probs=154.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|.||+|.+..+++.||+|........... ..+.+.++.+....|+|++.+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~------~~~~~e~~~l~~l~h~~iv~~~~-------------- 66 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQ------KQILRELEINKSCKSPYIVKYYG-------------- 66 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHH------HHHHHHHHHHHhCCCCCeeeeee--------------
Confidence 7899999999999999888999999998744221100 00111111111112333333322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHHHh---c--CCCHHHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIES---Q--GLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~---~--~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
.+. +..+..++||||++|++|.++..... . .......+..++..++.|+|..
T Consensus 67 ----------------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~ 124 (287)
T cd06621 67 ----------------------AFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR 124 (287)
T ss_pred ----------------------EEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111 11235689999999999987643211 1 1223345567788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|++|+||+++.++.++|+|||++..+.........+ ...+..|+ ....+..+.+.|+|++|+.++++
T Consensus 125 ~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~---~~~y~~pE-----~~~~~~~~~~~Dv~slG~il~~l 196 (287)
T cd06621 125 KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTG---TSFYMAPE-----RIQGKPYSITSDVWSLGLTLLEV 196 (287)
T ss_pred CcccCCCCHHHEEEecCCeEEEeeccccccccccccccccC---CccccCHH-----HhcCCCCCchhhHHHHHHHHHHH
Confidence 99999999999999999999999999987664332111111 11223333 33344457789999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc--cCCCHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL--TDPNPY 445 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~--~~~~p~ 445 (487)
+++.. ++..... ....+.++ ...+ .....|. +..... ...++.
T Consensus 197 ~~g~~--p~~~~~~--------------~~~~~~~~---~~~~------~~~~~~~----------~~~~~~~~~~~~~~ 241 (287)
T cd06621 197 AQNRF--PFPPEGE--------------PPLGPIEL---LSYI------VNMPNPE----------LKDEPGNGIKWSEE 241 (287)
T ss_pred HhCCC--CCCcccC--------------CCCChHHH---HHHH------hcCCchh----------hccCCCCCCchHHH
Confidence 98543 2221110 00000000 0000 0000000 000000 012467
Q ss_pred HHHHHHHHHhhcCcccccccchhhccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+++.+.+||..+|..|.+..+...|+||.
T Consensus 242 ~~~li~~~l~~~p~~Rpt~~eil~~~~~~ 270 (287)
T cd06621 242 FKDFIKQCLEKDPTRRPTPWDMLEHPWIK 270 (287)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHhCcccc
Confidence 78899999999999999999999999983
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.9e-22 Score=194.47 Aligned_cols=270 Identities=19% Similarity=0.214 Sum_probs=156.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHH-----HHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA-----IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~-----~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|+++.+|+.||+|+.+...... ...++.+++.+ ....|+++..+++
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~h~~i~~~~~--------- 68 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQL-------ESFEHPNIVRLLD--------- 68 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHh-------hccCCCCcceEEE---------
Confidence 57999999999999998789999999987432211 11111111111 1111222222221
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeec----CCCCceEEEeecCCCCcCcHHHHHh-cCCC--HHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWD----YTSGKVLTMEWVEGVKLNEQVAIES-QGLK--VLDLVNTGIQCSL 281 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~--~~~~~~~~i~~~l 281 (487)
.+.. .+...+++|||+.+ ++.++..... ...+ ....+..++..++
T Consensus 69 ---------------------------~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al 120 (287)
T cd07838 69 ---------------------------VCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGV 120 (287)
T ss_pred ---------------------------EEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHH
Confidence 1111 11236899999986 6665533221 1233 3344557788899
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
.++|..|++|+|++|+||+++.++.++|+|||.+..++..... ........+..||. ...+..+.+.|+||+|
T Consensus 121 ~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~PE~-----~~~~~~~~~~Di~s~G 193 (287)
T cd07838 121 DFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMAL--TSVVVTLWYRAPEV-----LLQSSYATPVDMWSVG 193 (287)
T ss_pred HHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCccc--ccccccccccChHH-----hccCCCCCcchhhhHH
Confidence 9999999999999999999999999999999998876433110 11111122233333 3344457789999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhh-CCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQ-YPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
+.+++++++ ..++...+.......+...... .....|..... ..+.+.... ..++ .....
T Consensus 194 ~~l~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-~~~~--~~~~~ 254 (287)
T cd07838 194 CIFAELFRR--RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL--------------PRSSFPSYT-PRSF--KSFVP 254 (287)
T ss_pred HHHHHHHhC--CCcccCCChHHHHHHHHHHcCCCChHhcCCCccc--------------chhhccccc-ccch--hhhhh
Confidence 999999975 3344443332222222111100 00000100000 000000000 0000 11222
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
..++...+.+.+||..||..|++..+.+.|+||
T Consensus 255 ~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 255 EICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 446788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-22 Score=191.77 Aligned_cols=227 Identities=15% Similarity=0.084 Sum_probs=145.0
Q ss_pred ccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHH
Q 011399 139 ASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNA 218 (487)
Q Consensus 139 Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~ 218 (487)
|++|.||+|+++.+|+.||+|+++..... ... .+. .....|++++.+.+.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~--~~~---~~~-------~~~~~~~~i~~~~~~~~---------------- 55 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY--SRE---RLT-------IIPHCVPNMVCLHKYIV---------------- 55 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhh--hhH---HHH-------HHhcCCCceeehhhhee----------------
Confidence 89999999999999999999998754211 000 000 01112455554444321
Q ss_pred HHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccccCCCC
Q 011399 219 RRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHP 296 (487)
Q Consensus 219 ~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp 296 (487)
.....+++|||++|++|.+..... .+.+.. ..+..++..++.|+|+.|++|+|+||
T Consensus 56 ---------------------~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp 113 (237)
T cd05576 56 ---------------------SEDSVFLVLQHAEGGKLWSHISKF-LNIPEECVKRWAAEMVVALDALHREGIVCRDLNP 113 (237)
T ss_pred ---------------------cCCeEEEEEecCCCCCHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 124568999999999998764322 233333 34456778899999999999999999
Q ss_pred CCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCC
Q 011399 297 GNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSV 376 (487)
Q Consensus 297 ~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~ 376 (487)
.||+++.+|.++++|||.+..+..... +......+..|+ ....+-.+++.|+||+|+.+++++++.. +.
T Consensus 114 ~Nil~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~y~aPE-----~~~~~~~~~~~DvwslG~il~el~~g~~--~~ 182 (237)
T cd05576 114 NNILLDDRGHIQLTYFSRWSEVEDSCD----GEAVENMYCAPE-----VGGISEETEACDWWSLGAILFELLTGKT--LV 182 (237)
T ss_pred HHEEEcCCCCEEEecccchhccccccc----cCCcCccccCCc-----ccCCCCCCchhhHHHHHHHHHHHHHCcc--hh
Confidence 999999999999999998766543211 100011122232 2223334667899999999999887421 00
Q ss_pred CcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhh
Q 011399 377 SELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFK 456 (487)
Q Consensus 377 ~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~ 456 (487)
.. .|... .. ...+. +....++.+++.+.+||.+
T Consensus 183 ~~--------------------~~~~~-------------~~--~~~~~------------~~~~~~~~~~~li~~~l~~ 215 (237)
T cd05576 183 EC--------------------HPSGI-------------NT--HTTLN------------IPEWVSEEARSLLQQLLQF 215 (237)
T ss_pred hc--------------------Cchhc-------------cc--ccccC------------CcccCCHHHHHHHHHHccC
Confidence 00 00000 00 00000 1112467889999999999
Q ss_pred cCcccccc-----cchhhcccc
Q 011399 457 DGRFRHVL-----YSPFTINLV 473 (487)
Q Consensus 457 d~~~r~~~-----~~~~~~~~~ 473 (487)
||.+||+. .+.+.|+||
T Consensus 216 dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 216 NPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CHHHhcCCCccchHHHHcCCCC
Confidence 99999986 566788886
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-21 Score=193.60 Aligned_cols=206 Identities=18% Similarity=0.203 Sum_probs=132.6
Q ss_pred HHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCH
Q 011399 115 CIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDV 194 (487)
Q Consensus 115 ~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i 194 (487)
+....++.+++..|... +.||+|+||+||+|+...+|+.||+|+.........
T Consensus 14 ~~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~------------------------- 66 (317)
T cd06635 14 IAELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN------------------------- 66 (317)
T ss_pred HHHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch-------------------------
Confidence 44556778888888866 779999999999999988899999999863311100
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--H
Q 011399 195 VALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--L 272 (487)
Q Consensus 195 ~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~ 272 (487)
..... +..|++.+.++ . ++.+.-..-+.......++||||+.| ++.+.........+... .
T Consensus 67 -----~~~~~------~~~e~~~l~~l----~-h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~ 129 (317)
T cd06635 67 -----EKWQD------IIKEVKFLQRI----K-HPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAA 129 (317)
T ss_pred -----HHHHH------HHHHHHHHHhC----C-CCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHH
Confidence 00011 12222222221 1 22221111112224567899999987 66555433333344433 3
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+..++..++.++|..|++|+|++|+||+++.+|.++|+|||++........ ..+ ...+..||.+.. ...+..+
T Consensus 130 i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~---~~~y~aPE~~~~--~~~~~~~ 202 (317)
T cd06635 130 ITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANS--FVG---TPYWMAPEVILA--MDEGQYD 202 (317)
T ss_pred HHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCccc--ccC---CccccChhhhhc--CCCCCCC
Confidence 456788899999999999999999999999999999999999876543211 111 112223333211 0234567
Q ss_pred CCCCcchHHHHHHHHHHHh
Q 011399 353 PDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~~~ 371 (487)
.+.|+||+|+.+++++++.
T Consensus 203 ~~~Dv~slGvil~el~~g~ 221 (317)
T cd06635 203 GKVDVWSLGITCIELAERK 221 (317)
T ss_pred ccccHHHHHHHHHHHHhCC
Confidence 8899999999999999854
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.2e-22 Score=193.74 Aligned_cols=271 Identities=20% Similarity=0.197 Sum_probs=159.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||.|++|+||+|.++.+|+.||||+++..... .+..++..++ ...|++++++.+.+.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~----------~l~~~~iv~~~~~~~------ 68 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLK----------ELNHPNIVRLLDVVH------ 68 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHH----------hcCCCCccCHhheec------
Confidence 6799999999999999889999999998643211 1111111111 122555555444221
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLL 285 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh 285 (487)
.....+++|||+++ +|.++..... ...+. ...+..++..++.++|
T Consensus 69 -------------------------------~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH 116 (283)
T cd07835 69 -------------------------------SENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH 116 (283)
T ss_pred -------------------------------cCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12556899999964 6766543222 12333 3344577888999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
..|++|+|++|+||+++.+|.++|+|||++..+...... .........+..||.+. .....+.+.|+||+|+.++
T Consensus 117 ~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~----~~~~~~~~~Di~slG~~l~ 191 (283)
T cd07835 117 SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT-YTHEVVTLWYRAPEILL----GSRQYSTPVDIWSIGCIFA 191 (283)
T ss_pred HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc-cCccccccCCCCCceee----cCcccCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999765432111 00001111222333221 1123466789999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++. .++...+.......+... ...|..-. ......+.+.... -|.+.. +. ........++.
T Consensus 192 ~l~~g~--~pf~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~-~~~~~~-----~~-~~~~~~~~~~~ 255 (283)
T cd07835 192 EMVNRR--PLFPGDSEIDQLFRIFRT-----LGTPDEDV--WPGVTSLPDYKPT-FPKWAR-----QD-LSKVVPNLDED 255 (283)
T ss_pred HHHhCC--CCCCCCCHHHHHHHHHHH-----hCCCChHH--hhhhhhchhhhhh-cccccc-----cc-hhhhcCCCCHH
Confidence 999854 344333322222222111 11111100 0000000000000 011100 00 01123356788
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.++.+.+||..||..|++..+.+.|+||
T Consensus 256 ~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 256 GLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.1e-22 Score=189.96 Aligned_cols=188 Identities=20% Similarity=0.211 Sum_probs=124.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|++|.||+|....+++.+++|+........ . +.+...++.+....|++++.+.+.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~---~~~~~e~~~l~~~~h~~i~~~~~~------------- 68 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----F---EIIQQEISMLKECRHPNIVAYFGS------------- 68 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----H---HHHHHHHHHHHhCCCCChhceEEE-------------
Confidence 77999999999999998789999999987442221 1 111111111112234444433221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
.......+++|||++|++|.++........+. ...+..++..++.++|..|++|
T Consensus 69 ------------------------~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h 124 (262)
T cd06613 69 ------------------------YLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIH 124 (262)
T ss_pred ------------------------EEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 11235568999999999998875443233333 3445677888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcchHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD---FLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~Di~sl~~~l~~~~ 368 (487)
+|++|.||+++.+|.++|+|||++..+....... ........+..|+ ..... ..+..+|+||+|+.+++++
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~y~~Pe-----~~~~~~~~~~~~~~Di~slG~~l~~~~ 198 (262)
T cd06613 125 RDIKGANILLTEDGDVKLADFGVSAQLTATIAKR-KSFIGTPYWMAPE-----VAAVERKGGYDGKCDIWALGITAIELA 198 (262)
T ss_pred cCCChhhEEECCCCCEEECccccchhhhhhhhcc-ccccCCccccCch-----hhcccccCCcCchhhhHHHHHHHHHHH
Confidence 9999999999999999999999988765432100 0001111222333 33222 4567789999999999999
Q ss_pred HHh
Q 011399 369 DDA 371 (487)
Q Consensus 369 ~~~ 371 (487)
++.
T Consensus 199 tg~ 201 (262)
T cd06613 199 ELQ 201 (262)
T ss_pred hCC
Confidence 843
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-22 Score=193.21 Aligned_cols=183 Identities=13% Similarity=0.170 Sum_probs=120.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||.|... ++..||||.++.+.... + ++..
T Consensus 10 ~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~----------------------------------~------~~~~ 48 (256)
T cd05113 10 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE----------------------------------D------EFIE 48 (256)
T ss_pred eEecCcccceEEEEEec-CCCcEEEEEcCCCcccH----------------------------------H------HHHH
Confidence 56999999999999886 56679999886431110 0 0122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++ ++++ +++++. ......+++|||+.|++|.+.........+.. ..+..++..++.++|+.|+
T Consensus 49 e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 121 (256)
T cd05113 49 EAKVMMKL-----SHEK--LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF 121 (256)
T ss_pred HHHHHhcC-----CCCC--eeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 22222222 1222 223322 22345689999999999988754322233433 3455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.++.++|+|||++..+.........+......+.+|+.. ..+..+.+.|+||+|+.++++++
T Consensus 122 ~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~-----~~~~~~~~~Di~slG~~l~~l~~ 196 (256)
T cd05113 122 IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL-----LYSKFSSKSDVWAFGVLMWEVYS 196 (256)
T ss_pred eccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHH-----hcCcccchhHHHHHHHHHHHHhc
Confidence 9999999999999999999999999876543211111111111233444443 33445778999999999999986
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.4e-22 Score=195.18 Aligned_cols=254 Identities=17% Similarity=0.143 Sum_probs=159.7
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|... +.||+|++|.||+|....+|+.||+|+......... -...+.+ ..+....|++++.+.+.+
T Consensus 21 ~~~~--~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~---~~~~~e~----~~l~~l~hp~i~~~~~~~------ 85 (293)
T cd06647 21 YTRF--EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKK---ELIINEI----LVMRENKHPNIVNYLDSY------ 85 (293)
T ss_pred ceee--eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHH---HHHHHHH----HHHhhcCCCCeeehhhee------
Confidence 4444 789999999999999887899999999753211110 0011111 111122345544444321
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
......++||||++|++|.++.............+..++..++.++|+.
T Consensus 86 -------------------------------~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~ 134 (293)
T cd06647 86 -------------------------------LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN 134 (293)
T ss_pred -------------------------------eeCCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1235568999999999998875433223333445567788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.++.++|+|||++..+....... ... .+.+..++++....+..+.+.|+||+|+.++++
T Consensus 135 gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~-~~~-----~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~l 208 (293)
T cd06647 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STM-----VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 208 (293)
T ss_pred CEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc-ccc-----cCChhhcCchhhccCCCCchhhHHHHHHHHHHH
Confidence 99999999999999999999999999887665432110 000 111222333333445557789999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+++. .++...+....+..+. ..-.|.+.. ....++.++
T Consensus 209 l~g~--~pf~~~~~~~~~~~~~----------------------------~~~~~~~~~------------~~~~~~~l~ 246 (293)
T cd06647 209 VEGE--PPYLNENPLRALYLIA----------------------------TNGTPELQN------------PEKLSAIFR 246 (293)
T ss_pred HhCC--CCCCCCChhhheeehh----------------------------cCCCCCCCC------------ccccCHHHH
Confidence 9743 2333222111000000 000011110 012356788
Q ss_pred HHHHHHHhhcCcccccccchhhcccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+.+||..+|..|.+..+.+.|+||..
T Consensus 247 ~li~~~l~~~p~~Rp~~~~il~h~~~~~ 274 (293)
T cd06647 247 DFLNRCLEMDVEKRGSAKELLQHPFLKI 274 (293)
T ss_pred HHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 8999999999999999999999999964
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=194.68 Aligned_cols=286 Identities=15% Similarity=0.101 Sum_probs=159.8
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhc-ccCCHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI-ITTDVVALIDEFASR 204 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~ 204 (487)
+-|+.. +.||+|++|.||+|.+..+|+.||||+.......... . ..+...+..+... .|+|++.+++.
T Consensus 7 ~~y~~~--~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~--~---~~~~~E~~~l~~l~~h~ni~~~~~~---- 75 (337)
T cd07852 7 RKYEIL--QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATD--A---QRTFREIMFLQELGDHPNIVKLLNV---- 75 (337)
T ss_pred hHHHHh--HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchh--h---hhhhHHHHHHHHhcCCCCccceeee----
Confidence 334444 6799999999999999878999999987532111000 0 0000000011111 24444333331
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (487)
+.. .....++||||+++ +|.+..............+..++..++.+
T Consensus 76 --------------------------------~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~ 122 (337)
T cd07852 76 --------------------------------IKAENDKDIYLVFEYMET-DLHAVIRANILEDVHKRYIMYQLLKALKY 122 (337)
T ss_pred --------------------------------eccCCCceEEEEeccccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 111 11345899999986 77655322212222333456788889999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH----HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF----AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
+|+.|++|+|+||+||+++.+|.++|+|||++..+...... ..........+..|+.+ ...+..+.+.|+||
T Consensus 123 LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~sDi~s 198 (337)
T cd07852 123 IHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEIL----LGSTRYTKGVDMWS 198 (337)
T ss_pred HHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceee----eccccccccchHHH
Confidence 99999999999999999999999999999999876433210 11111111122233322 11234467899999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+|+.+++++++.. ++...+..... .......+ ..+......+......+.+.....+... ... ...
T Consensus 199 lG~~l~el~tg~~--pf~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~ 264 (337)
T cd07852 199 VGCILGEMLLGKP--LFPGTSTLNQL---EKIIEVIG-PPSAEDIESIKSPFAATMLDSLPSRPRK-------PLD-ELL 264 (337)
T ss_pred HHHHHHHHHhCCC--CCCCCChHHHH---HHHHHHhC-CCCHHHHHHHHhhhHHHhhhhccccccc-------chh-hhc
Confidence 9999999998542 33332222211 11111111 1111111111111110001000111111 111 122
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
...++++++.+.+|+..||..|++..+.+.|+|+
T Consensus 265 ~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~ 298 (337)
T cd07852 265 PKASDDALDLLKKLLVFNPNKRLTAEEALEHPYV 298 (337)
T ss_pred cCCCHHHHHHHHHhccCCcccccCHHHHhhChhh
Confidence 2357888999999999999999999999888888
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.6e-22 Score=198.22 Aligned_cols=285 Identities=15% Similarity=0.141 Sum_probs=168.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|+...+|+.||||+..+..... ...+.+...+..+....|+++..+.+.+...
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDL-----IDAKRILREIKLLRHLRHENIIGLLDILRPP--------- 71 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccc-----hhhhhHHHHHHHHHhcCCcchhhhhhhhccc---------
Confidence 67999999999999998789999999987543210 1111111222222233477777666643211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
.. ...+..+++|||+.+ +|.+..... .........+..++..++.++|..|++|+
T Consensus 72 ---------------~~--------~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~ 127 (330)
T cd07834 72 ---------------SP--------EDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHR 127 (330)
T ss_pred ---------------Cc--------ccccceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 00 011345899999985 565543221 11223334466788889999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+||+||+++.+|.++|+|||++........ ...........+..||.+.. ....+.+.|+||+|+.+++++++
T Consensus 128 dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~il~~l~~g 203 (330)
T cd07834 128 DLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLS----SSRYTKAIDIWSVGCIFAELLTR 203 (330)
T ss_pred CCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeec----ccCCCcchhHHHHHHHHHHHHcC
Confidence 9999999999999999999999987654321 01111122223344443321 11457789999999999999985
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+.......+.. ......+..+.. .......+ ......+.-. .+ ........++.+++.+
T Consensus 204 ~--~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~-----~~--~~~~~~~~~~~~~~li 269 (330)
T cd07834 204 K--PLFPGRDYIDQLNLIVE---VLGTPSEEDLKF-ITSEKARN-YLKSLPKKPK-----KP--LSKLFPGASPEAIDLL 269 (330)
T ss_pred C--CCcCCCCHHHHHHHHHH---hcCCCChhHhhh-ccccchhh-HHhhcccCCc-----ch--hHHhcccCCHHHHHHH
Confidence 3 34444443333322221 111111111110 00000000 0000111100 01 1122334678899999
Q ss_pred HHHHhhcCcccccccchhhccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+||.+||..|.+..+.+.|+||.
T Consensus 270 ~~~l~~~P~~Rpt~~~ll~~~~~~ 293 (330)
T cd07834 270 EKMLVFDPKKRITADEALAHPYLA 293 (330)
T ss_pred HHHccCChhhCCCHHHHHhCccHH
Confidence 999999999999999999999994
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-22 Score=191.40 Aligned_cols=250 Identities=17% Similarity=0.174 Sum_probs=156.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|++..+|+.|+||+.+........ .. +..
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~--------------------------------~~------~~~ 48 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFR--------------------------------KQ------LLR 48 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHH--------------------------------HH------HHH
Confidence 6799999999999999988999999998755321000 00 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHH-CCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLE-YGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~-~giv 290 (487)
|...+.++. ++.+.-..-+.......+++|||++|++|.++.... ...+. ...+..++..++.++|. .|++
T Consensus 49 e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~ 122 (264)
T cd06623 49 ELKTLRSCE-----SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHII 122 (264)
T ss_pred HHHHHHhcC-----CCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 222222221 121111111122336678999999999998875432 22333 33455678889999999 9999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|++|+||+++.+|.++|+|||++..+....... .........++++....+..+.+.|+|++|+.+++++++
T Consensus 123 H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg 196 (264)
T cd06623 123 HRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC------NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALG 196 (264)
T ss_pred cCCCCHHHEEECCCCCEEEccCccceecccCCCcc------cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999999988765432110 001111222333444445567789999999999999974
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC-CCHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD-PNPYLRDA 449 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~-~~p~~r~~ 449 (487)
.. |+...+. .......+.. .....|.. ... .+..+++.
T Consensus 197 ~~--p~~~~~~-------------------~~~~~~~~~~------~~~~~~~~--------------~~~~~~~~l~~l 235 (264)
T cd06623 197 KF--PFLPPGQ-------------------PSFFELMQAI------CDGPPPSL--------------PAEEFSPEFRDF 235 (264)
T ss_pred CC--CCccccc-------------------cCHHHHHHHH------hcCCCCCC--------------CcccCCHHHHHH
Confidence 32 3322210 0000011111 00011111 011 45678888
Q ss_pred HHHHHhhcCcccccccchhhccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+.+||..+|..|.+..+-+.|+|+.
T Consensus 236 i~~~l~~~p~~R~~~~~ll~~~~~~ 260 (264)
T cd06623 236 ISACLQKDPKKRPSAAELLQHPFIK 260 (264)
T ss_pred HHHHccCChhhCCCHHHHHhCHHHH
Confidence 9999999999999998888888874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-21 Score=186.04 Aligned_cols=189 Identities=16% Similarity=0.174 Sum_probs=120.3
Q ss_pred cccccccccEEEEEEEcc-CC--cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKY-SG--QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-~g--~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|++|.||+|.+.. +| ..||||+.+..... ...+.+......+....|++++.+.+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~~~~----------- 63 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------DIMDDFLKEAAIMHSLDHENLIRLYG----------- 63 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------HHHHHHHHHHHHHhhcCCCCccceeE-----------
Confidence 358999999999999864 33 36999999865432 11111111111111222444333222
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~ 287 (487)
.+.+ ...+++|||++|++|.+...... ...+.. ..+..++..++.++|..
T Consensus 64 -------------------------~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 116 (257)
T cd05040 64 -------------------------VVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK 116 (257)
T ss_pred -------------------------EEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 2222 55689999999999988754322 123333 33446788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.++.++|+|||++..+........... ........++++.......+.+.|+||+|+.++++
T Consensus 117 ~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~---~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el 193 (257)
T cd05040 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE---HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEM 193 (257)
T ss_pred CccccccCcccEEEecCCEEEeccccccccccccccceeccc---CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHH
Confidence 999999999999999999999999999987754211000000 00111222333333334457789999999999999
Q ss_pred HH
Q 011399 368 FD 369 (487)
Q Consensus 368 ~~ 369 (487)
++
T Consensus 194 ~t 195 (257)
T cd05040 194 FT 195 (257)
T ss_pred Hh
Confidence 86
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.6e-22 Score=192.54 Aligned_cols=247 Identities=13% Similarity=0.090 Sum_probs=152.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||+|+||.||+|++..+++.||+|........... .+... +..+....|++++++++.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~----~~~~e---~~~l~~l~h~~iv~~~~~------------- 73 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQ----PLHEE---IALHSYLKHRNIVQYLGS------------- 73 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHH----HHHHH---HHHHHhcCCCCeeeeeee-------------
Confidence 6799999999999999888999999988654322211 11110 111111224444333322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--C--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--K--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
.......+++|||++|++|.+......... + ....+..++..++.++|+.|+
T Consensus 74 ------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 129 (268)
T cd06624 74 ------------------------DSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI 129 (268)
T ss_pred ------------------------eccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCE
Confidence 112345689999999999988754332222 2 233445688899999999999
Q ss_pred cccCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC--CCCCCCcchHHHHHHH
Q 011399 290 FHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF--LSPDVDVTPIVPALRN 366 (487)
Q Consensus 290 vH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~Di~sl~~~l~~ 366 (487)
+|+|+||.||+++. ++.++|+|||++..+....... ....+.+..++++.+..+. .+.+.|+||+|+.+++
T Consensus 130 ~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~ 203 (268)
T cd06624 130 VHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT------ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVE 203 (268)
T ss_pred eecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc------ccCCCCccccChhhhccccccCCchhhhHHHHHHHHH
Confidence 99999999999986 6799999999987654221100 0001122223333332221 4678899999999999
Q ss_pred HHHHhccCCCCcCcHH-HHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 367 FFDDALNSSVSELNFK-TIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
++++. .++...... ...+.. .. ....|.+ ....+++
T Consensus 204 l~~g~--~p~~~~~~~~~~~~~~--------------------~~-------~~~~~~~--------------~~~~~~~ 240 (268)
T cd06624 204 MATGK--PPFIELGEPQAAMFKV--------------------GM-------FKIHPEI--------------PESLSAE 240 (268)
T ss_pred HHhCC--CCCccccChhhhHhhh--------------------hh-------hccCCCC--------------CcccCHH
Confidence 98743 232221100 000000 00 0011111 1124567
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+++.+.+||..+|..|.+..+-+.|+||
T Consensus 241 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 241 AKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 8888999999999999999898899886
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-22 Score=201.30 Aligned_cols=147 Identities=20% Similarity=0.409 Sum_probs=111.2
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
..|..+ ++||-|+||.|.+++-..|...+|.|.+++. |+-. ..-...+
T Consensus 629 SmFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKa-------DVl~-----------------------rnQvaHV 676 (1034)
T KOG0608|consen 629 SMFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLRKA-------DVLM-----------------------RNQVAHV 676 (1034)
T ss_pred cceEEE--eeecccccceeEEEeecchhhHHHHhhhHHH-------HHHh-----------------------hhhhhhh
Confidence 456667 8899999999999998878889999987632 2111 1111335
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecC--CCCceEEEeecCCCCcCcHH-HHHhcCCCHHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQV-AIESQGLKVLDLVNTGIQCSLR 282 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~-~~~~~~~~~~~~~~~~i~~~l~ 282 (487)
..|-|.+.||.| ++ |.++|..+ ....|.||+|++||++..++ +..-..++..+++...+.++++
T Consensus 677 KAERDILAEADn-----------~W--VVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAie 743 (1034)
T KOG0608|consen 677 KAERDILAEADN-----------EW--VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIE 743 (1034)
T ss_pred hhhhhhHhhcCC-----------cc--eEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 667788888765 33 23444333 35578999999999997763 2233345667788888889999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCC
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~ 317 (487)
++|..|||||||||.||||+.+|.|||.|||++.-
T Consensus 744 sVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 744 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred HHHhccceecccCccceEEccCCceeeeecccccc
Confidence 99999999999999999999999999999999873
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=192.94 Aligned_cols=288 Identities=17% Similarity=0.151 Sum_probs=161.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|.++.+|+.||||+.+......- ......++ ++.+....|++++.+.+.+...
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-~~~~~~~e----~~~~~~l~h~~i~~~~~~~~~~--------- 78 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-FPITAIRE----IKILRQLNHRNIVNLKEIVTDK--------- 78 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-chHHHHHH----HHHHHhCCCCCeeeeeheecCc---------
Confidence 679999999999999988899999999875421100 00000111 1111122366666554432211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
. -+..+.+..+..+++|||++| ++.+.........+ ....+..++..++.|||+.|++|
T Consensus 79 ---------------~---~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H 139 (302)
T cd07864 79 ---------------Q---DALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLH 139 (302)
T ss_pred ---------------c---hhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 0 000011112356899999987 44433222112233 33445577888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||+||+++.++.++|+|||++..+................+..|+.+. .....+++.|+|++|+.+++++++.
T Consensus 140 ~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~----~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 140 RDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLL----GEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred CCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhc----CCCCCCchhHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999876543211111111112233444321 1223467899999999999999753
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+....+..+...+. ...|..+..+ ... .. ....++..... +. .+......++.+++.+.
T Consensus 216 --~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~---~~-~~~~~~~~~~~----~~-~~~~~~~~~~~~~~li~ 280 (302)
T cd07864 216 --PIFQANQELAQLELISRLCG---SPCPAVWPDV-IKL---PY-FNTMKPKKQYR----RR-LREEFSFIPTPALDLLD 280 (302)
T ss_pred --CCCCCCChHHHHHHHHHHhC---CCChhhcccc-ccc---cc-ccccccccccc----cc-hhhhcCCCCHHHHHHHH
Confidence 33333332222222222211 1111111000 000 00 00011110000 00 11112235788999999
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+||..||..|.+..+.+.|+||
T Consensus 281 ~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 281 HMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHccCChhhCCCHHHHhcCCCC
Confidence 9999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-21 Score=188.86 Aligned_cols=192 Identities=16% Similarity=0.130 Sum_probs=117.0
Q ss_pred cccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhc-ccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|++|.||+|+.. .+++.||||+.+...... .......+....+.+... .|++++.+.+.
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~---~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~--------- 73 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ---KAKTAEHTRTERQVLEAVRRCPFLVTLHYA--------- 73 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh---hhhHHHHHHHHHHHHHhccCCcchhhhhee---------
Confidence 67999999999999864 367899999986321110 000000000000000011 12333332221
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~ 287 (487)
.......++||||++|++|.+..... .... ....+..++..++.++|..
T Consensus 74 ----------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~ 124 (288)
T cd05583 74 ----------------------------FQTDTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQL 124 (288)
T ss_pred ----------------------------eecCCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 12234567999999999997764322 2223 3333445788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcchHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD--FLSPDVDVTPIVPALR 365 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~Di~sl~~~l~ 365 (487)
|++|+|+||.||+++.++.++|+|||++..+.......-........+..|+.+ ..+ ..+...|+|++|+.++
T Consensus 125 ~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~~~Dv~slG~il~ 199 (288)
T cd05583 125 GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVI-----RGGSGGHDKAVDWWSLGVLTF 199 (288)
T ss_pred CeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHh-----cCCCCCCcchhhhHHHHHHHH
Confidence 999999999999999999999999999887643321100000111122233332 222 2467899999999999
Q ss_pred HHHHHh
Q 011399 366 NFFDDA 371 (487)
Q Consensus 366 ~~~~~~ 371 (487)
+++++.
T Consensus 200 el~tg~ 205 (288)
T cd05583 200 ELLTGA 205 (288)
T ss_pred HHHhCC
Confidence 999743
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-22 Score=194.97 Aligned_cols=277 Identities=16% Similarity=0.135 Sum_probs=155.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|.||+|..+.+|+.||+|..+...... ..... +..
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~~~~~------~~~ 50 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-------------------------------GVPST------AIR 50 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-------------------------------cchHH------HHH
Confidence 67999999999999998899999999875321100 00000 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|++.+.++. ++.+.-..-+.......++||||+++ ++.+..... ....+. ...+..++..++.++|+.|++
T Consensus 51 e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~ 124 (294)
T PLN00009 51 EISLLKEMQ-----HGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVL 124 (294)
T ss_pred HHHHHHhcc-----CCCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 222222221 12211111122234567899999975 555442221 111222 234557888999999999999
Q ss_pred ccCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|++|+||+++. ++.++++|||++..+...... .........+..||.+. .....+.+.|+||+|+.++++++
T Consensus 125 H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~~PE~~~----~~~~~~~~~Dv~slG~i~~~l~t 199 (294)
T PLN00009 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT-FTHEVVTLWYRAPEILL----GSRHYSTPVDIWSVGCIFAEMVN 199 (294)
T ss_pred CCCCCcceEEEECCCCEEEEcccccccccCCCccc-cccCceeecccCHHHHh----CCCCCCcHHHHHHHHHHHHHHHh
Confidence 9999999999985 557999999999765322110 01111122233444331 12345778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+....+..+.... .......+ .....+... ....|.+.. +. ........++..++.
T Consensus 200 g~--~pf~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~-~~~~~~~~~-----~~-~~~~~~~~~~~~~~~ 263 (294)
T PLN00009 200 QK--PLFPGDSEIDELFKIFRIL---GTPNEETW----PGVTSLPDY-KSAFPKWPP-----KD-LATVVPTLEPAGVDL 263 (294)
T ss_pred CC--CCCCCCCHHHHHHHHHHHh---CCCChhhc----cccccchhh-hhhcccCCC-----CC-HHHhCcCCChHHHHH
Confidence 53 3443333222222221111 11000000 000000000 000011110 00 111123457889999
Q ss_pred HHHHHhhcCcccccccchhhccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+.+||..||..|.+..+.+.|+||+
T Consensus 264 i~~~l~~~P~~Rps~~~~l~~~~~~ 288 (294)
T PLN00009 264 LSKMLRLDPSKRITARAALEHEYFK 288 (294)
T ss_pred HHHHccCChhhCcCHHHHhcCchHh
Confidence 9999999999999999999999994
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=186.53 Aligned_cols=247 Identities=18% Similarity=0.162 Sum_probs=155.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|++|.||+|+...+|+.|++|......... ...+. +..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-------------------------------~~~~~------~~~ 48 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE-------------------------------EALKS------IMQ 48 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH-------------------------------HHHHH------HHH
Confidence 78999999999999998889999999987542110 00011 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++. ++.+.-..-+.......+++|||++|++|.++.... ...+. ...+..++..++.++|+.|++|
T Consensus 49 e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H 122 (254)
T cd06627 49 EIDLLKNLK-----HPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIH 122 (254)
T ss_pred HHHHHHhCC-----CCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 222222221 122211111122345678999999999998874332 22333 3345567888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||+||+++.+|.++|+|||++......... . ....+....++++.......+.+.|+|++|+.+++++++.
T Consensus 123 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~ 196 (254)
T cd06627 123 RDIKAANILTTKDGVVKLADFGVATKLNDVSKD-D-----ASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN 196 (254)
T ss_pred CCCCHHHEEECCCCCEEEeccccceecCCCccc-c-----cccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCC
Confidence 999999999999999999999999877654321 0 0111222233333333344577899999999999999743
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+.....+... ....+.+ ....++.+++.+.
T Consensus 197 --~p~~~~~~~~~~~~~~----------------------------~~~~~~~--------------~~~~~~~~~~~i~ 232 (254)
T cd06627 197 --PPYYDLNPMAALFRIV----------------------------QDDHPPL--------------PEGISPELKDFLM 232 (254)
T ss_pred --CCCCCccHHHHHHHHh----------------------------ccCCCCC--------------CCCCCHHHHHHHH
Confidence 2333222111111110 0000100 1123567788889
Q ss_pred HHHhhcCcccccccchhhcccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+||..+|+.|.+..+.+.|+||
T Consensus 233 ~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHhCChhhCcCHHHHhcCCCC
Confidence 9999999999988888888886
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=191.04 Aligned_cols=204 Identities=16% Similarity=0.102 Sum_probs=128.6
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
...||+|++|.||+|.. +|+.||||+.+...... -..++.+.+.+..+....|+|++++++
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~~~g------------- 85 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGH----KVLIDITENEIKNLRRIDSNNILKIYG------------- 85 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEecccccccc----HHHHHHHHHHHHHHHhcCCCCEEEEee-------------
Confidence 46799999999999998 79999999987431110 000111111111111122333333222
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeec---CCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH-C
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWD---YTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE-Y 287 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~---~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~ 287 (487)
.+.+ .....++||||++||+|.++...+. ........+..++..++.++|. .
T Consensus 86 -----------------------~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 142 (283)
T PHA02988 86 -----------------------FIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT 142 (283)
T ss_pred -----------------------eEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC
Confidence 1111 1245689999999999998754321 2233334455677889999998 5
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|||+||.||+++.+|.++++|||++..+..... .. .....+..|+.+... .+..+.++|+||+|+.++++
T Consensus 143 ~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~-~~---~~~~~y~aPE~~~~~---~~~~~~k~Di~SlGvil~el 215 (283)
T PHA02988 143 NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF-KN---VNFMVYFSYKMLNDI---FSEYTIKDDIYSLGVVLWEI 215 (283)
T ss_pred CCCCCcCChhhEEECCCCcEEEcccchHhhhccccc-cc---cCcccccCHHHhhhc---cccccchhhhhHHHHHHHHH
Confidence 999999999999999999999999999876543211 01 112233445543321 13457899999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDG 387 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~ 387 (487)
+++ ..|+...+...+...
T Consensus 216 ~~g--~~Pf~~~~~~~~~~~ 233 (283)
T PHA02988 216 FTG--KIPFENLTTKEIYDL 233 (283)
T ss_pred HHC--CCCCCCCCHHHHHHH
Confidence 984 356666665554433
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=187.27 Aligned_cols=247 Identities=13% Similarity=0.060 Sum_probs=152.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+++.+|||......... .. .+.+...++.+....|+++..+.+.+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~---~~~~~~e~~~l~~~~~~~i~~~~~~~------------ 68 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK--DE---RLAAQNECQVLKLLSHPNIIEYYENF------------ 68 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEecccccc--HH---HHHHHHHHHHHhhCCCCchhheeeeE------------
Confidence 67999999999999998899999999986431110 00 01111111111111233333332211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~giv 290 (487)
......++||||++|++|.++..... ...+.. ..+..++..++.++|++|++
T Consensus 69 -------------------------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~ 123 (256)
T cd08220 69 -------------------------LEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLIL 123 (256)
T ss_pred -------------------------ecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 12345689999999999988754432 223333 33446778899999999999
Q ss_pred ccCCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|++|+||+++.++ .++|+|||++..+....... .. .+.+..++++.......+.+.|+||+|+.++++++
T Consensus 124 h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~--~~-----~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~ 196 (256)
T cd08220 124 HRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY--TV-----VGTPCYISPELCEGKPYNQKSDIWALGCVLYELAS 196 (256)
T ss_pred cCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc--cc-----ccCCcccCchhccCCCCCcccchHHHHHHHHHHHh
Confidence 999999999998654 58999999998775432110 00 11122233333333445678999999999999987
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
.. .++...+.......+. ....+. +....++.+++.
T Consensus 197 ~~--~~~~~~~~~~~~~~~~----------------------------~~~~~~--------------~~~~~~~~l~~l 232 (256)
T cd08220 197 LK--RAFEAANLPALVLKIM----------------------------SGTFAP--------------ISDRYSPDLRQL 232 (256)
T ss_pred CC--CCcccCchHHHHHHHH----------------------------hcCCCC--------------CCCCcCHHHHHH
Confidence 42 2333322221111000 000000 011246778889
Q ss_pred HHHHHhhcCcccccccchhhcccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.+||..||..|++..+.+.|+||
T Consensus 233 i~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 233 ILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHccCChhhCCCHHHHhhCCCC
Confidence 999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.1e-22 Score=191.61 Aligned_cols=185 Identities=14% Similarity=0.158 Sum_probs=120.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.++ ++..+|+|+..++.... . ++..
T Consensus 10 ~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~----------------------------------~------~~~~ 48 (256)
T cd05059 10 KELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSE----------------------------------D------DFIE 48 (256)
T ss_pred hhhccCCCceEEEeEec-CCccEEEEEeccCCCCH----------------------------------H------HHHH
Confidence 67999999999999987 67889999986432110 0 0111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ +++.+.-..-+.......+++|||++|++|.++........+.. ..+..++..++.++|+.|++|
T Consensus 49 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 123 (256)
T cd05059 49 EAKVMMKL-----SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIH 123 (256)
T ss_pred HHHHHHhC-----CCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 22222211 12222211112233456789999999999988754332223333 344577888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+||+||+++.+|.++|+|||+++...........+... ....++++....+..+.+.|+||+|+.++++++
T Consensus 124 ~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~-----~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~ 196 (256)
T cd05059 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKF-----PVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFS 196 (256)
T ss_pred ccccHhhEEECCCCcEEECCcccceecccccccccCCCCC-----CccccCHHHhccCCCCchhhHHHHHHHHHHHhc
Confidence 9999999999999999999999988664321111000000 112233444444556778999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=194.56 Aligned_cols=93 Identities=16% Similarity=0.185 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+..++..++.|+|+.|++|||+||+||+++.++.++|+|||++..+.........+. ....+..++++....+..+
T Consensus 184 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~ 259 (343)
T cd05103 184 YSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD----ARLPLKWMAPETIFDRVYT 259 (343)
T ss_pred HHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC----CCCCcceECcHHhcCCCCC
Confidence 456788899999999999999999999999999999999999887533211000000 0011122333333344557
Q ss_pred CCCCcchHHHHHHHHHH
Q 011399 353 PDVDVTPIVPALRNFFD 369 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~ 369 (487)
.+.|+||+|+.++++++
T Consensus 260 ~~~Di~slG~~l~el~~ 276 (343)
T cd05103 260 IQSDVWSFGVLLWEIFS 276 (343)
T ss_pred chhhHHHHHHHHHHHHH
Confidence 78999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-21 Score=192.58 Aligned_cols=262 Identities=17% Similarity=0.185 Sum_probs=157.0
Q ss_pred hCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHH
Q 011399 120 LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199 (487)
Q Consensus 120 lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~ 199 (487)
++..++++|..+ +.||+|++|.||+|+...+|+.|++|+......... ...
T Consensus 15 ~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~-~~~-------------------------- 65 (313)
T cd06633 15 YKDDPEEIFVGL--HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN-EKW-------------------------- 65 (313)
T ss_pred ccCCHHHHhhcc--eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCch-HHH--------------------------
Confidence 456788888777 569999999999999988999999999864311100 000
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHH
Q 011399 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGI 277 (487)
Q Consensus 200 ~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i 277 (487)
.. +..|...+.++. +...+.+..++ ......+++|||+.| ++.+.........+... .+..++
T Consensus 66 ---~~------~~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi 130 (313)
T cd06633 66 ---QD------IIKEVKFLQQLK----HPNTIEYKGCY-LKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGA 130 (313)
T ss_pred ---HH------HHHHHHHHHhCC----CCCCccEEEEE-EeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 00 111222222111 11111112222 123557899999976 55554333333344333 345678
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
..++.|+|..|++|+|++|+||+++.+|.++|+|||++....... ...+. ..+..|+.+.. ...+..+.+.|+
T Consensus 131 ~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~--~~~~~---~~y~aPE~~~~--~~~~~~~~~sDv 203 (313)
T cd06633 131 LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN--SFVGT---PYWMAPEVILA--MDEGQYDGKVDV 203 (313)
T ss_pred HHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCC--Ccccc---ccccChhhccc--cCCCCCCchhhH
Confidence 889999999999999999999999999999999999987543321 11111 12223333210 012445778899
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++++. .|+...+.......+ ... ..|..
T Consensus 204 ~slGvil~el~~g~--~p~~~~~~~~~~~~~---~~~-------------------------~~~~~------------- 240 (313)
T cd06633 204 WSLGITCIELAERK--PPLFNMNAMSALYHI---AQN-------------------------DSPTL------------- 240 (313)
T ss_pred HHHHHHHHHHHhCC--CCCCCCChHHHHHHH---Hhc-------------------------CCCCC-------------
Confidence 99999999998743 233322211111111 000 00110
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.....+..+++.+.+||..+|..|++..+.+.|+||..
T Consensus 241 ~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 241 QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 00123455777888888899999999888888888843
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-21 Score=185.56 Aligned_cols=248 Identities=14% Similarity=0.137 Sum_probs=157.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|..+.+|..||+|......... .+...++ ...+.+....|++++.+.+.+.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~---~E~~~l~~~~h~~i~~~~~~~~----------- 69 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--KEKEASK---KEVILLAKMKHPNIVTFFASFQ----------- 69 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--hhhHHHH---HHHHHHHhCCCCChhhhhheec-----------
Confidence 67999999999999999889999999986421100 0111111 1111122223666655554321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-CCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
.....+++|||++|++|.++...... ..+. ...+..++..++.++|..|++
T Consensus 70 --------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (257)
T cd08225 70 --------------------------ENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKIL 123 (257)
T ss_pred --------------------------cCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 12456899999999999887543221 1233 233446778899999999999
Q ss_pred ccCCCCCCeEEcCCCc-EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGK-LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~-i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||.||++++++. ++++|||.+..+....... ....+.+..++++....+..+.+.|+||+|+.++++++
T Consensus 124 H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~ 197 (257)
T cd08225 124 HRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA------YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCT 197 (257)
T ss_pred cccCCHHHEEEcCCCCeEEecccccchhccCCcccc------cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHh
Confidence 9999999999998865 6999999988765432110 00112233334444444556788999999999999987
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+......... . ....+. ....+...++.
T Consensus 198 g~--~p~~~~~~~~~~~~~~---~------------------------~~~~~~---------------~~~~~~~~~~~ 233 (257)
T cd08225 198 LK--HPFEGNNLHQLVLKIC---Q------------------------GYFAPI---------------SPNFSRDLRSL 233 (257)
T ss_pred CC--CCCCCccHHHHHHHHh---c------------------------ccCCCC---------------CCCCCHHHHHH
Confidence 43 2333222222111110 0 000000 01235678888
Q ss_pred HHHHHhhcCcccccccchhhcccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.+|+..+|..|.+.-+.+.|+||
T Consensus 234 i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 234 ISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHhccChhhCcCHHHHhhCCCC
Confidence 999999999999999899999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=186.40 Aligned_cols=250 Identities=17% Similarity=0.107 Sum_probs=157.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.|++|+........ . ..+.+.+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~-----------------------------~~~~~~~------ 48 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE--E-----------------------------ELEALER------ 48 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccch--H-----------------------------HHHHHHH------
Confidence 67999999999999998889999999986542110 0 0011111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCC--CCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++. ++.+.-..-..... ...+++|||++|++|.++..... ..+. ...+..++..++.++|+.|+
T Consensus 49 e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 49 EIRILSSLQ-----HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred HHHHHHHcC-----CCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 111122211 22222111122222 56789999999999988754332 3333 33445677789999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|++|.||+++.+|.++|+|||.+.......... ......+....++++....+..+.+.|+|++|+.+++++.
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~ 198 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE----GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT 198 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEecccccccc----cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999988775542100 0001112233334444444446788999999999999998
Q ss_pred HhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 370 DALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 370 ~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
+. .++...+ .....+.+.. ....+. +....++.+++
T Consensus 199 g~--~p~~~~~~~~~~~~~~~~---------------------------~~~~~~--------------~~~~~~~~l~~ 235 (260)
T cd06606 199 GK--PPWSELGNPMAALYKIGS---------------------------SGEPPE--------------IPEHLSEEAKD 235 (260)
T ss_pred CC--CCCCCCCchHHHHHhccc---------------------------cCCCcC--------------CCcccCHHHHH
Confidence 43 2333322 1111111000 000000 11123577888
Q ss_pred HHHHHHhhcCcccccccchhhcccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+.+||..||..|++..+.+.|+||
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhhCCCC
Confidence 9999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.3e-21 Score=182.18 Aligned_cols=187 Identities=18% Similarity=0.213 Sum_probs=121.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|... +++.||+|+.+........ ..+..
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~--------------------------------------~~~~~ 41 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELK--------------------------------------IKFLS 41 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHH--------------------------------------HHHHH
Confidence 36999999999999976 8999999998754322110 01222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ +++++.-+.-+....+..++||||++|++|.+.........+... .+..++..++.++|..|++|
T Consensus 42 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H 116 (250)
T cd05085 42 EARILKQY-----DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIH 116 (250)
T ss_pred HHHHHHhC-----CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 33332222 122222112222334567899999999999887543332334333 33466778999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+||+||+++.++.++|+|||++.......... .+ .....+..++++....+..+.+.|+||+|+.++++++
T Consensus 117 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~ 189 (250)
T cd05085 117 RDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS-SG----LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFS 189 (250)
T ss_pred cccChheEEEcCCCeEEECCCccceecccccccc-CC----CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhc
Confidence 9999999999999999999999987654321100 00 0000122333444445556778999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-21 Score=193.01 Aligned_cols=279 Identities=18% Similarity=0.176 Sum_probs=159.2
Q ss_pred cccccccccEEEEEEEccC--CcEEEEEEecCChHHH-----HHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYS--GQIVAVKVQRPGIEEA-----IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~--g~~VAVKv~~p~~~~~-----~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
+.||+|+||.||+|+...+ |..||||+++...... ...++.+++.+ ..|++++.+++..
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l---------~~h~~iv~~~~~~----- 71 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHF---------RGHKNITCLYDMD----- 71 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHh---------cCCCChheeeeee-----
Confidence 5799999999999999877 8999999986332111 01111111100 0133333332210
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh 285 (487)
..........+++|||+.+ +|.+..... .........+..++..+|.++|
T Consensus 72 ----------------------------~~~~~~~~~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 122 (332)
T cd07857 72 ----------------------------IVFPGNFNELYLYEELMEA-DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIH 122 (332)
T ss_pred ----------------------------eeccccCCcEEEEEecccC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0000112345799999975 665553211 1122333455678888999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH---HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA---IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
..|++|+|+||+||+++.+|.++|+|||++..+....... ......+..+..|+.+. ...-.+.+.|+||+|+
T Consensus 123 ~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~~Di~slGv 198 (332)
T cd07857 123 SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIML----SFQSYTKAIDVWSVGC 198 (332)
T ss_pred hCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHh----CCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999998765321110 00111122233444331 1122467889999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChH-HHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAY-YALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~-~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
.+++++.+. .++...+....+..+...+. .|+. ...-+... ........... .. ..++ ......
T Consensus 199 ~l~~l~~g~--~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~-~~----~~~~--~~~~~~ 263 (332)
T cd07857 199 ILAELLGRK--PVFKGKDYVDQLNQILQVLG-----TPDEETLSRIGSP-KAQNYIRSLPN-IP----KKPF--ESIFPN 263 (332)
T ss_pred HHHHHHhCC--cCCCCCCHHHHHHHHHHHhC-----CCCHHHHHhhhhh-hHHHHHHhccc-cC----Ccch--HhhCCC
Confidence 999998643 45555454443333332221 1221 10000000 00000000000 00 0011 112234
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.++.+++.+.+||..||..|++..+.+.|+|+.
T Consensus 264 ~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~ 296 (332)
T cd07857 264 ANPLALDLLEKLLAFDPTKRISVEEALEHPYLA 296 (332)
T ss_pred CCHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence 578899999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-22 Score=200.48 Aligned_cols=287 Identities=10% Similarity=0.051 Sum_probs=154.7
Q ss_pred ccccc--cccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 135 PIAAA--SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 135 ~ig~G--s~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.||.| ++|+||+|++..+|+.||||+........ ...+.++....+. ....|+|++.+.+.
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~e~~~~---~~l~h~niv~~~~~------------ 67 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE--EHLKALQNEVVLS---HFFRHPNIMTSWTV------------ 67 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH--HHHHHHHHHHHHH---HhCCCCCcceEeee------------
Confidence 35655 99999999998899999999986432111 0011111111111 11123333333221
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHH--HHHHHHHHHHHHHHHCCc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLD--LVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~--~~~~~i~~~l~~lh~~gi 289 (487)
.......++||||+.++++.++.... ..+.+... .+..++..+|.|+|+.|+
T Consensus 68 -------------------------~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 122 (328)
T cd08226 68 -------------------------FTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY 122 (328)
T ss_pred -------------------------EecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 12235568999999999998774432 12334333 455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcchHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYAL--DFLSPDVDVTPIVPALR 365 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~Di~sl~~~l~ 365 (487)
+|||+||+||+++.++.+++.|||.+....... ........ .........++++.... +-.++.+|+||+|+.++
T Consensus 123 vHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~ 201 (328)
T cd08226 123 IHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFP-QFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITAC 201 (328)
T ss_pred ecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccc-ccccCccCccChhhhcCCCCCCCchhhHHHHHHHHH
Confidence 999999999999999999999998543321110 00000000 00000011223333222 22467899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHH------------HHHhhhhhCCCCChHHhHhHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTV------------LEGLALYADPNFKVLAASYPY 433 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~------------leg~~~~ldP~~~~~~~~~p~ 433 (487)
+++++. .++....-....... ... +...|............ .+......-+. .+.. +.
T Consensus 202 el~~g~--~p~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ 271 (328)
T cd08226 202 ELATGR--VPFQDMLRTQMLLQK---LKG-PPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQ-TMTS---ER 271 (328)
T ss_pred HHHhCC--CCCCCcChHHHHHHH---hcC-CCCCCccccccchhhhhhccchhhhhcccccchhcccccc-cccc---cc
Confidence 999743 344443322221111 111 11111100000000000 00000000000 0000 00
Q ss_pred HHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 434 FAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 434 ~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+........++..++.+.+||..||..|++.-+.+.|+||.
T Consensus 272 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~ 312 (328)
T cd08226 272 LRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK 312 (328)
T ss_pred ccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence 00000112457889999999999999999999999999994
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-21 Score=191.16 Aligned_cols=185 Identities=16% Similarity=0.173 Sum_probs=116.9
Q ss_pred cccccccccEEEEEEEccCCcEE--EEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIV--AVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~V--AVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|+||+||+|.++.+|..+ |+|..+....+.. ... +
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~--------------------------------~~~------~ 54 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--------------------------------HRD------F 54 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHH--------------------------------HHH------H
Confidence 67999999999999987777654 6665543211110 011 1
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhc---------------CCC--HHHH
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------GLK--VLDL 272 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~--~~~~ 272 (487)
.+|...+.++ .+++. +++++ ....+..+++|||++|++|.++...... ..+ ....
T Consensus 55 ~~Ei~~l~~l----~~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 128 (303)
T cd05088 55 AGELEVLCKL----GHHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 128 (303)
T ss_pred HHHHHHHHHh----cCCCC--cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHH
Confidence 1122222222 12222 22222 2334667999999999999887543210 122 2334
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+..++..++.++|+.|++|+|+||+|||++.++.++|+|||++.......... .. ......++++.......+
T Consensus 129 ~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~-~~------~~~~~y~aPE~~~~~~~~ 201 (303)
T cd05088 129 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT-MG------RLPVRWMAIESLNYSVYT 201 (303)
T ss_pred HHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhhhcc-cC------CCcccccCHHHHhccCCc
Confidence 55778889999999999999999999999999999999999986432211110 00 001112333333444567
Q ss_pred CCCCcchHHHHHHHHHH
Q 011399 353 PDVDVTPIVPALRNFFD 369 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~ 369 (487)
++.|+||+|+.++++++
T Consensus 202 ~~~Di~slG~il~ellt 218 (303)
T cd05088 202 TNSDVWSYGVLLWEIVS 218 (303)
T ss_pred ccccchhhhhHHHHHHh
Confidence 88999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-21 Score=191.53 Aligned_cols=145 Identities=19% Similarity=0.216 Sum_probs=99.0
Q ss_pred CCCceEEEeecCCCCcCcHHHHHhc----------CCCHH--HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEE
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIESQ----------GLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLA 308 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~----------~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~ 308 (487)
....+++|||++|++|.++...... ..+.. ..+..++..++.++|+.|++|+|+||+||+++.++.++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~ 170 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIK 170 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceE
Confidence 3567899999999999887543220 12333 34456788899999999999999999999999999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHH
Q 011399 309 FLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGL 388 (487)
Q Consensus 309 l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l 388 (487)
|+|||++..+.........+ .....+..++++....+..+++.|+||+|+.++++++.....++...+...++..+
T Consensus 171 l~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~ 246 (296)
T cd05051 171 IADFGMSRNLYSSDYYRVQG----RAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENA 246 (296)
T ss_pred EccccceeecccCcceeecC----cCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHH
Confidence 99999988654321110010 11112233444444455678899999999999999874444555555544444444
Q ss_pred H
Q 011399 389 G 389 (487)
Q Consensus 389 ~ 389 (487)
.
T Consensus 247 ~ 247 (296)
T cd05051 247 G 247 (296)
T ss_pred H
Confidence 3
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.9e-21 Score=184.51 Aligned_cols=119 Identities=14% Similarity=0.107 Sum_probs=86.3
Q ss_pred CCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCC-------cEEEEec
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG-------KLAFLDF 312 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g-------~i~l~DF 312 (487)
...++||||++|++|.++........+.. ..+..++..++.|+|+.|++|+|+||+||+++.++ .++|+||
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 45689999999999988755443233433 33457888899999999999999999999999887 7999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcchHHHHHHHHHHH
Q 011399 313 GMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD--FLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 313 Gla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|++..+..... ..+ ....++++.+..+ ..+.+.|+||+|+.+++++..
T Consensus 153 g~a~~~~~~~~--~~~--------~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~ 202 (259)
T cd05037 153 GIPITVLSREE--RVE--------RIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN 202 (259)
T ss_pred Ccccccccccc--ccc--------CCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC
Confidence 99987654211 111 1112233333333 457789999999999998873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-21 Score=194.36 Aligned_cols=277 Identities=17% Similarity=0.187 Sum_probs=157.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|+||.||+|....+|+.||||+......... ....+ ..
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------~~~~~------~~ 58 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV-------------------------------LAKRT------YR 58 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEecccccccc-------------------------------hhHHH------HH
Confidence 789999999999999988999999998753211100 00001 11
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|...+.++ .+..-+.+...+.......+++|||+. ++|.++.............+..++..++.++|+.|++|+|
T Consensus 59 E~~~l~~l----~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~d 133 (328)
T cd07856 59 ELKLLKHL----RHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRD 133 (328)
T ss_pred HHHHHHhc----CCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 11111111 111122222233333355789999994 4676553222222223344567888899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
++|+||+++.+|.++|+|||++...+..... ..+ ...+..|+.+. .....+++.|+||+|+.+++++++.
T Consensus 134 l~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~---~~~y~aPE~~~----~~~~~~~~~Dv~slG~il~el~tg~-- 203 (328)
T cd07856 134 LKPSNILINENCDLKICDFGLARIQDPQMTG-YVS---TRYYRAPEIML----TWQKYDVEVDIWSAGCIFAEMLEGK-- 203 (328)
T ss_pred CCHHHEeECCCCCEEeCccccccccCCCcCC-Ccc---cccccCceeee----ccCCcCcHHHHHHHHHHHHHHHhCC--
Confidence 9999999999999999999998865432111 111 11122233211 1123467899999999999999853
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
.++...+.......+...+ -..|..+..-...-..++-... + +.. ...|+ .......++..++.+.+|
T Consensus 204 ~~f~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~~~~~--~~~~~~~~~~~~~li~~~ 271 (328)
T cd07856 204 PLFPGKDHVNQFSIITDLL----GTPPDDVINTICSENTLRFVQS-L-PKR----EPVPF--SEKFKNADPSAIDLLEKM 271 (328)
T ss_pred CCCCCCCHHHHHHHHHHHh----CCCCHHHHHhccchhhHHHHhh-c-ccc----CCCcH--HHHcCCCCHHHHHHHHHH
Confidence 3333333222221222111 1122222110000000000000 0 000 00111 112234578899999999
Q ss_pred HhhcCcccccccchhhccccc
Q 011399 454 LFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 454 L~~d~~~r~~~~~~~~~~~~~ 474 (487)
|..+|..|++..+.+.|+||.
T Consensus 272 l~~~P~~R~t~~ell~~~~~~ 292 (328)
T cd07856 272 LVFDPQKRISAAEALAHPYLA 292 (328)
T ss_pred cCCChhhCCCHHHHhcCCccc
Confidence 999999999999999999983
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-21 Score=193.06 Aligned_cols=198 Identities=17% Similarity=0.105 Sum_probs=122.8
Q ss_pred cccccccccEEEEEEEccCCcE----EEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSGQI----VAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~----VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||+||+|++..+|+. ||||+.+.........+ +......+....|+|++.+++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~------~~~e~~~l~~l~h~niv~~~g---------- 76 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE------ILDEAYVMASVDNPHVCRLLG---------- 76 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHH------HHHHHHHHHhCCCCCCCeEEE----------
Confidence 7899999999999998656654 89999864322111100 000000011112333322221
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
.. .....+++|||+++|+|.+.........+... .+..++..+|.|+|+.
T Consensus 77 --------------------------~~--~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~ 128 (316)
T cd05108 77 --------------------------IC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER 128 (316)
T ss_pred --------------------------EE--cCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 11 12446799999999999887543332333333 3446788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|++|||+||+||+++.++.++|+|||+++.+....... ..+..... ..++++....+..+.++|+||+|+.+++
T Consensus 129 ~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~-----~y~apE~~~~~~~~~~~Di~slGv~l~e 203 (316)
T cd05108 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWE 203 (316)
T ss_pred CeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccce-----eecChHHhccCCCCchhhhHHHHHHHHH
Confidence 99999999999999999999999999998765432110 00000011 2233333334455788999999999999
Q ss_pred HHHHhccCCCCcCcH
Q 011399 367 FFDDALNSSVSELNF 381 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~ 381 (487)
+++. ...++++.+.
T Consensus 204 l~t~-g~~p~~~~~~ 217 (316)
T cd05108 204 LMTF-GSKPYDGIPA 217 (316)
T ss_pred HHcC-CCCCCCCCCH
Confidence 8861 1234444443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=193.13 Aligned_cols=257 Identities=18% Similarity=0.179 Sum_probs=152.6
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+++.|... +.||+|++|.||+|+...+|+.||+|+.......... ..
T Consensus 12 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~------------------------------~~ 59 (307)
T cd06607 12 DPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE------------------------------KW 59 (307)
T ss_pred Ccchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHH------------------------------HH
Confidence 344555555 6799999999999999888999999988532111000 00
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCS 280 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~ 280 (487)
.. +..|...+.+ + +++++.-..-+.......++||||++| ++.+.........+.. ..+..++..+
T Consensus 60 ~~------~~~Ei~~l~~----l-~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~ 127 (307)
T cd06607 60 QD------IIKEVRFLQQ----L-RHPNTIEYKGCYLREHTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQG 127 (307)
T ss_pred HH------HHHHHHHHHh----C-CCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHH
Confidence 01 1112211111 1 122222111122234567899999986 4444433222333333 3345678889
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH---HcCCCCCCCCc
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY---ALDFLSPDVDV 357 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~Di 357 (487)
+.|+|..|++|+|++|+||+++.+|.++|+|||++....+... ..+ .+..++++.. ..+..+.+.|+
T Consensus 128 L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~--~~~--------~~~y~aPE~~~~~~~~~~~~~sDv 197 (307)
T cd06607 128 LAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS--FVG--------TPYWMAPEVILAMDEGQYDGKVDV 197 (307)
T ss_pred HHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCC--ccC--------CccccCceeeeccCCCCCCcccch
Confidence 9999999999999999999999999999999999876643311 111 1122222221 12345778999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++++. .++...+.......+ ... ..|....
T Consensus 198 ~s~G~il~el~tg~--~p~~~~~~~~~~~~~---~~~-------------------------~~~~~~~----------- 236 (307)
T cd06607 198 WSLGITCIELAERK--PPLFNMNAMSALYHI---AQN-------------------------DSPTLSS----------- 236 (307)
T ss_pred HHHHHHHHHHHcCC--CCCCCccHHHHHHHH---hcC-------------------------CCCCCCc-----------
Confidence 99999999998853 233332221111110 000 0011100
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
...+..+++.+.+||..||..|.+..+-+.|+||...
T Consensus 237 --~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 237 --NDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred --hhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 0124567778888888888888888888888887544
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-21 Score=186.89 Aligned_cols=274 Identities=18% Similarity=0.193 Sum_probs=159.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|....+|+.||+|+.+........ ... ..
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~--~~~------------------------------------~~ 46 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ--VNN------------------------------------LR 46 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCchh--hhH------------------------------------HH
Confidence 5699999999999999889999999988643211100 000 01
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecC-CCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++ .++++ +.+...+.+. .+..++||||++| ++.+.........+ ....+..++..+|.++|..|+
T Consensus 47 e~~~l~~l----~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 47 EIQALRRL----SPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred HHHHHhhc----CCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 11111111 11111 1122222221 1567899999986 55444322222233 334455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|++|.||+++. |.++|+|||++..+...... ........+..||.+ ...+..+...|+||+|+.++++++
T Consensus 122 ~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~----~~~~~~~~~~Di~slGv~l~el~~ 194 (282)
T cd07831 122 FHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY--TEYISTRWYRAPECL----LTDGYYGPKMDIWAVGCVFFEILS 194 (282)
T ss_pred eecccCHHHEEEcC-CCeEEEecccccccccCCCc--CCCCCCcccCChhHh----hcCCCCCcchhHHHHHHHHHHHHc
Confidence 99999999999999 99999999999876432110 001112223344432 123456788999999999999997
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+....+..+.... ...++.+ .+.... .-...+.........+ ..+....+..+++.
T Consensus 195 ~~--~p~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 258 (282)
T cd07831 195 LF--PLFPGTNELDQIAKIHDVL----GTPDAEV---LKKFRK------SRHMNYNFPSKKGTGL-RKLLPNASAEGLDL 258 (282)
T ss_pred CC--cCCCCCCHHHHHHHHHHHc----CCCCHHH---HHhhcc------cccccccCcccccccH-HHHcccccHHHHHH
Confidence 43 3444444333232222211 1112221 111100 0000111111100111 22233557899999
Q ss_pred HHHHHhhcCcccccccchhhcccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.+||.++|.+|++..+.+.|+||
T Consensus 259 i~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 259 LKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred HHHHhccCcccccCHHHHhhCCCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-21 Score=188.75 Aligned_cols=255 Identities=16% Similarity=0.125 Sum_probs=150.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.+..+|+.||+|+.+........ .+. ... +..
T Consensus 8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~--~~~--------------------------~~~------~~~ 53 (266)
T cd06651 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPET--SKE--------------------------VSA------LEC 53 (266)
T ss_pred ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchh--HHH--------------------------HHH------HHH
Confidence 7799999999999999888999999988643211000 000 001 122
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecC-CCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ . +++ +.+...+.+. ....+++|||++|++|.+...... ........+..++..++.++|+.|++
T Consensus 54 e~~~l~~l----~-h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~ 128 (266)
T cd06651 54 EIQLLKNL----Q-HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIV 128 (266)
T ss_pred HHHHHHHc----C-CCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 22222222 1 122 1222222221 244679999999999987743221 12223334567888899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|++|+||+++.++.++|+|||++..+........ . .....+....++++.+...-.+.+.|+||+|+.+++++++
T Consensus 129 H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g 205 (266)
T cd06651 129 HRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGT-G--IRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTE 205 (266)
T ss_pred eCCCCHHHEEECCCCCEEEccCCCccccccccccCC-c--cccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHC
Confidence 999999999999999999999999886643211000 0 0000111222333333334446789999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+.... +.. . ......|.+. ...++..+..+
T Consensus 206 ~--~pf~~~~~~~~---~~~-------------------~-----~~~~~~~~~~--------------~~~~~~~~~li 242 (266)
T cd06651 206 K--PPWAEYEAMAA---IFK-------------------I-----ATQPTNPQLP--------------SHISEHARDFL 242 (266)
T ss_pred C--CCccccchHHH---HHH-------------------H-----hcCCCCCCCc--------------hhcCHHHHHHH
Confidence 3 33332211110 000 0 0001112211 12345566666
Q ss_pred HHHHhhcCcccccccchhhccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.++..+|..|.+..+-+.|+||.
T Consensus 243 -~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 243 -GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred -HHhcCChhhCcCHHHHhcCcccc
Confidence 46667999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-21 Score=186.71 Aligned_cols=248 Identities=14% Similarity=0.052 Sum_probs=150.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|+||.++...+|+.|++|.........- -.. ++.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------~~~------~~~~ 48 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK-------------------------------ERR------DALN 48 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchh-------------------------------HHH------HHHH
Confidence 679999999999999988999999998753210000 000 1122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ .+..-+.+...+ ......+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 49 e~~~l~~~----~h~~i~~~~~~~-~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (256)
T cd08221 49 EIVILSLL----QHPNIIAYYNHF-MDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGIL 123 (256)
T ss_pred HHHHHHhC----CCCCeeEEEeEE-ecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 22222222 111112222222 23456789999999999988754331 223333 33446677899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|++|+||+++.++.++|+|||++........ ..... .+.+..++++...-...+...|+||+|+.+++++++
T Consensus 124 h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-~~~~~-----~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g 197 (256)
T cd08221 124 HRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-MAETV-----VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTL 197 (256)
T ss_pred ccCCChHhEEEeCCCCEEECcCcceEEcccccc-ccccc-----CCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHC
Confidence 999999999999999999999999886644321 00001 112222233332222346678999999999999874
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+.......+. .+ ...|. ....+...++.+
T Consensus 198 ~--~~~~~~~~~~~~~~~~------------------------~~---~~~~~---------------~~~~~~~~~~~i 233 (256)
T cd08221 198 K--RTFDATNPLNLVVKIV------------------------QG---NYTPV---------------VSVYSSELISLV 233 (256)
T ss_pred C--CCCCCCCHHHHHHHHH------------------------cC---CCCCC---------------ccccCHHHHHHH
Confidence 3 2333222211111110 00 00000 012356677888
Q ss_pred HHHHhhcCcccccccchhhcccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+||.++|..|.+..+.+.++|+
T Consensus 234 ~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 234 HSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHcccCcccCCCHHHHhhCcCC
Confidence 88998999999888777777663
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-21 Score=186.12 Aligned_cols=191 Identities=14% Similarity=0.051 Sum_probs=121.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|..+.+|+.||||........ +......+......+....|+|++++++.+.
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----------- 72 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM----DAKARADCIKEIDLLKQLNHPNVIKYYASFI----------- 72 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhh----hHHHHHHHHHHHHHHHHccCCchhhhhheeE-----------
Confidence 6799999999999999889999999987532110 0000011111111111223455444443221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHHH--HHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLD--LVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~--~~~~~i~~~l~~lh~~g 288 (487)
.....+++|||++|++|.++..... ...+... .+..++..++.++|+.|
T Consensus 73 --------------------------~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08229 73 --------------------------EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR 126 (267)
T ss_pred --------------------------eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 1245679999999999988754211 1233333 34567888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|+||.||+++.+|.++++|||++..+...... .........+..|+. ......+...|+||+|+.+++++
T Consensus 127 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~ape~-----~~~~~~~~~~Dv~slG~il~~l~ 200 (267)
T cd08229 127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPER-----IHENGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred eecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc-cccccCCcCccCHHH-----hcCCCccchhhHHHHHHHHHHHH
Confidence 999999999999999999999999998766432110 000011112233333 22334467789999999999998
Q ss_pred HHh
Q 011399 369 DDA 371 (487)
Q Consensus 369 ~~~ 371 (487)
++.
T Consensus 201 ~g~ 203 (267)
T cd08229 201 ALQ 203 (267)
T ss_pred hCC
Confidence 753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-21 Score=198.57 Aligned_cols=202 Identities=16% Similarity=0.184 Sum_probs=128.8
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
-++||+|+||+||+|++. -.||||++.-..... +.++.+...+..+.+.+|.||.=+...+.
T Consensus 397 ~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~-----~qlqaFKnEVa~lkkTRH~NIlLFMG~~~---------- 458 (678)
T KOG0193|consen 397 GERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTP-----EQLQAFKNEVAVLKKTRHENILLFMGACM---------- 458 (678)
T ss_pred cceeccccccceeecccc---cceEEEEEecCCCCH-----HHHHHHHHHHHHHhhcchhhheeeehhhc----------
Confidence 378999999999999987 469999986331110 01111111111222222332222222111
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~giv 290 (487)
.....||..||+|-+|....+..+-.++ ....+.+|+..|+.|||..+||
T Consensus 459 ----------------------------~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~II 510 (678)
T KOG0193|consen 459 ----------------------------NPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNII 510 (678)
T ss_pred ----------------------------CCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhh
Confidence 1223689999999999887655443333 3445678899999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHH----HHHHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcchHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEE----ARFAIIGHVVHMVNRDYEAMARDYYALD---FLSPDVDVTPIVPA 363 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~Di~sl~~~ 363 (487)
|+|+|..|||+.++++|||.|||++..-.-- ....-.+- +. +||+++..++ -+++..|+++||++
T Consensus 511 HrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gs---il-----wmAPEvIRmqd~nPfS~qSDVYaFGiV 582 (678)
T KOG0193|consen 511 HRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGS---LL-----WMAPEVIRMQDDNPFSFQSDVYAFGIV 582 (678)
T ss_pred hhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccc---hh-----hhcHHHHhhcccCCCCcccchhhhhHH
Confidence 9999999999999999999999998642211 00111111 22 2333333333 34778999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHH
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGA 390 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~ 390 (487)
+||++++-+ |++.-+-.+++|.+|.
T Consensus 583 ~YELltg~l--Pysi~~~dqIifmVGr 607 (678)
T KOG0193|consen 583 WYELLTGEL--PYSIQNRDQIIFMVGR 607 (678)
T ss_pred HHHHHhCcC--CcCCCChhheEEEecc
Confidence 999999654 4444445567777664
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-21 Score=190.27 Aligned_cols=194 Identities=18% Similarity=0.211 Sum_probs=126.6
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
.+.|+.. +.+|+|++|.||+|.+..+++.|++|+....... ...
T Consensus 18 ~~~~~~~--~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----------------------------------~~~ 61 (286)
T cd06614 18 RELYKNL--EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQN----------------------------------KEL 61 (286)
T ss_pred cccchHh--HhccCCCCeEEEEEEEccCCcEEEEEEEecCchh----------------------------------HHH
Confidence 3345444 6899999999999999888999999998754220 001
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLR 282 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~ 282 (487)
+..|...+.++ . ++++.-..-........+++|||++|++|.++........+. ...+..++..++.
T Consensus 62 ------~~~e~~~l~~l----~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~ 130 (286)
T cd06614 62 ------IINEILIMKDC----K-HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLE 130 (286)
T ss_pred ------HHHHHHHHHHC----C-CCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 11111111111 1 122211111222346779999999999999886554313333 3345577888999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
++|..|++|+|++|+||+++.+|.++|+|||++..+....... ....+.+..++++....+..+.+.|+||+|+
T Consensus 131 ~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGv 204 (286)
T cd06614 131 YLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKR------NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGI 204 (286)
T ss_pred HHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhh------ccccCCcccCCHhHhcCCCCCCccccHHHHH
Confidence 9999999999999999999999999999999887654332110 0011112223333333344577899999999
Q ss_pred HHHHHHHHh
Q 011399 363 ALRNFFDDA 371 (487)
Q Consensus 363 ~l~~~~~~~ 371 (487)
.+++++++.
T Consensus 205 il~~l~~g~ 213 (286)
T cd06614 205 MCIEMAEGE 213 (286)
T ss_pred HHHHHHhCC
Confidence 999999743
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.6e-21 Score=184.77 Aligned_cols=248 Identities=14% Similarity=0.124 Sum_probs=154.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.+..+|+.||+|+........ .+... +....+.+....|+++..+.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~---~~~e~~~l~~l~~~~~~~~~~-------------- 66 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE--KERED---ALNEVKILKKLNHPNIIKYYE-------------- 66 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh--HHHHH---HHHHHHHHHhcCCCChhheEE--------------
Confidence 67999999999999998889999999986432110 00000 000000000111222222211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
........+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|
T Consensus 67 -----------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 123 (258)
T cd08215 67 -----------------------SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK 123 (258)
T ss_pred -----------------------EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1112356789999999999987754332 233333 344566778999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|++|.||++++++.++|+|||++........ ... ...+.+..++++.......+...|+|++|+.+++++
T Consensus 124 ~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~--~~~----~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 197 (258)
T cd08215 124 ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD--LAK----TVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELC 197 (258)
T ss_pred EecccCChHHeEEcCCCcEEECCccceeecccCcc--eec----ceeeeecccChhHhccCCCCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999887644320 000 011122223333333344577899999999999988
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
.+. .++...+...+...+. . ... +. +....+..+++
T Consensus 198 ~g~--~p~~~~~~~~~~~~~~---~------------------------~~~-~~--------------~~~~~~~~~~~ 233 (258)
T cd08215 198 TLK--HPFEGENLLELALKIL---K------------------------GQY-PP--------------IPSQYSSELRN 233 (258)
T ss_pred cCC--CCCCCCcHHHHHHHHh---c------------------------CCC-CC--------------CCCCCCHHHHH
Confidence 632 3433333222111110 0 000 00 01134567888
Q ss_pred HHHHHHhhcCcccccccchhhcccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
.+.+||..+|..|++..+.+.|+||
T Consensus 234 ~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 234 LVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHcCCChhhCcCHHHHhcCCCC
Confidence 9999999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-21 Score=188.52 Aligned_cols=141 Identities=15% Similarity=0.114 Sum_probs=94.8
Q ss_pred CCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
...+++|||+++++|.++..... ...+....+..++..++.++|+.|++|+|+||.||++++++.++|+|||++..+..
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~ 147 (257)
T cd05116 68 ESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCC
Confidence 34589999999999988754321 22333444557788899999999999999999999999999999999999987643
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH-HhccCCCCcCcHHHHHHH
Q 011399 321 EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD-DALNSSVSELNFKTIVDG 387 (487)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 387 (487)
......... .....+..++++....+..+.+.|+||+|+.++++++ + ..|+...+...+...
T Consensus 148 ~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g--~~p~~~~~~~~~~~~ 210 (257)
T cd05116 148 DENYYKAKT---HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYG--QKPYKGMKGNEVTQM 210 (257)
T ss_pred CCCeeeecC---CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCC--CCCCCCCCHHHHHHH
Confidence 321100000 0001122333334444556778999999999999986 3 235555444444433
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-21 Score=190.76 Aligned_cols=249 Identities=19% Similarity=0.179 Sum_probs=148.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||++.+..+|+.||||.......... .. .+..
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~--------------------------------~~------~~~~ 51 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKE--------------------------------QK------RLLM 51 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHH--------------------------------HH------HHHH
Confidence 679999999999999998999999998864321100 00 1112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHH---HH-hcCCC--HHHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVA---IE-SQGLK--VLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~---~~-~~~~~--~~~~~~~~i~~~l~~lh 285 (487)
|...+.++ .+++. +++++. ......+++|||+.+ ++.++.. .. ....+ ....+..++..+++|+|
T Consensus 52 e~~~l~~~----~~~~~--iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh 124 (288)
T cd06616 52 DLDVVMRS----SDCPY--IVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK 124 (288)
T ss_pred HHHHHHHh----cCCCC--EeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 22222211 11121 222221 123567899999875 4443321 11 12233 33445567788999999
Q ss_pred H-CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcchH
Q 011399 286 E-YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALD---FLSPDVDVTPI 360 (487)
Q Consensus 286 ~-~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~Di~sl 360 (487)
+ .|++|+|+||+||+++.+|.++|+|||+++.+..... ....+ +..+..||.+ ..+ ..+++.|+||+
T Consensus 125 ~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~---~~~y~aPE~~-----~~~~~~~~~~~~Di~sl 196 (288)
T cd06616 125 EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAG---CRPYMAPERI-----DPSARDGYDVRSDVWSL 196 (288)
T ss_pred hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccC---ccCccCHHHh-----ccccccCCcchhhhhHH
Confidence 7 4999999999999999999999999999876532210 00011 1122334433 222 45778999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
|+.+++++++. .|+...+ .....+..... ..+ |... .....
T Consensus 197 G~il~el~~g~--~p~~~~~--~~~~~~~~~~~----~~~---------------------~~~~----------~~~~~ 237 (288)
T cd06616 197 GITLYEVATGK--FPYPKWN--SVFDQLTQVVK----GDP---------------------PILS----------NSEER 237 (288)
T ss_pred HHHHHHHHhCC--CCchhcc--hHHHHHhhhcC----CCC---------------------CcCC----------CcCCC
Confidence 99999998743 2332221 11111111110 111 1100 00001
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
..++.+.+.+.+||.+||..|.+..+-+.|+||.
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 271 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence 3467788899999999999999999999999984
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-21 Score=186.36 Aligned_cols=189 Identities=12% Similarity=0.058 Sum_probs=121.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+...+|+.||||..++........ ..++..
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~------------------------------------~~~~~~ 51 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKA------------------------------------RQDCVK 51 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHH------------------------------------HHHHHH
Confidence 67999999999999998899999999875321100000 001112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHH--HHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVL--DLVNTGIQCSLRQLLE 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~--~~~~~~i~~~l~~lh~ 286 (487)
|...+.++ +++. +++++ .......+++|||++|++|.++..... ...+.. ..+..++..++.|+|+
T Consensus 52 e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 124 (267)
T cd08228 52 EIDLLKQL-----NHPN--VIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS 124 (267)
T ss_pred HHHHHHhC-----CCcc--eeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 22221211 1111 11111 112356789999999999987654211 112332 3445678889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|+|+||+||+++.+|.++|+|||++..+...... .. ...+.+..++++.....-.+.+.|+||+|+.+++
T Consensus 125 ~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~-~~-----~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~e 198 (267)
T cd08228 125 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-AH-----SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 198 (267)
T ss_pred CCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH-Hh-----cCCCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence 99999999999999999999999999998877543211 00 1112222333333333334677899999999999
Q ss_pred HHHHh
Q 011399 367 FFDDA 371 (487)
Q Consensus 367 ~~~~~ 371 (487)
++++.
T Consensus 199 l~~g~ 203 (267)
T cd08228 199 MAALQ 203 (267)
T ss_pred HhcCC
Confidence 99743
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.3e-22 Score=190.61 Aligned_cols=185 Identities=18% Similarity=0.199 Sum_probs=120.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.+. +++.||||..+++.... + ++..
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~----------------------------------~------~~~~ 50 (261)
T cd05068 12 RKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDP----------------------------------K------DFLA 50 (261)
T ss_pred EEecccCCccEEEEEec-CCeEEEEEeeCCCcccH----------------------------------H------HHHH
Confidence 78999999999999986 67889999987542110 0 0122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++. ++.+.-..-+.......+++|||++|++|.++..... ...+. ...+..++..++.++|+.|++
T Consensus 51 e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 125 (261)
T cd05068 51 EAQIMKKLR-----HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYI 125 (261)
T ss_pred HHHHHHHCC-----CCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 222222221 1111111112233456789999999999988754322 12333 334456788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||+||+++++|.++|+|||++..+.........+......+..|+ ....+..+.+.|+||+|+.++++++
T Consensus 126 H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~~l~el~t 199 (261)
T cd05068 126 HRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPE-----AALYNRFSIKSDVWSFGILLTEIVT 199 (261)
T ss_pred eccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCcc-----ccccCCCCchhhHHHHHHHHHHHHh
Confidence 9999999999999999999999999876532111111110011122333 3333445778999999999999997
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-21 Score=184.52 Aligned_cols=197 Identities=16% Similarity=0.211 Sum_probs=126.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.+. +++.||||...++.... +. +..
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~----------------------------------~~------~~~ 50 (261)
T cd05034 12 RKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSP----------------------------------EA------FLQ 50 (261)
T ss_pred eeeccCcceEEEEEEEc-CCceEEEEEecCCccCH----------------------------------HH------HHH
Confidence 67999999999999987 77899999987542110 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
|...+.++. ++. +++++ .......+++|||++|++|.+...... ...+. ...+..++..++.++|+.|
T Consensus 51 e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~ 123 (261)
T cd05034 51 EAQIMKKLR-----HDK--LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN 123 (261)
T ss_pred HHHHHhhCC-----CCC--EeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 222222111 122 22222 222356789999999999988754322 12233 3445567888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|+||+||++++++.++|+|||++..+.........+......+..|+ ....+..++..|+||+|+.+++++
T Consensus 124 i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE-----~~~~~~~~~~~Di~slG~il~~l~ 198 (261)
T cd05034 124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPE-----AANYGRFTIKSDVWSFGILLTEIV 198 (261)
T ss_pred cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHH-----HhccCCcCchhHHHHHHHHHHHHH
Confidence 999999999999999999999999999877643221111111112233444 333345577899999999999999
Q ss_pred H-HhccCCCCcCcHHHHH
Q 011399 369 D-DALNSSVSELNFKTIV 385 (487)
Q Consensus 369 ~-~~~~~~~~~~~~~~~~ 385 (487)
+ +. .++...+.....
T Consensus 199 t~g~--~p~~~~~~~~~~ 214 (261)
T cd05034 199 TYGR--VPYPGMTNREVL 214 (261)
T ss_pred hCCC--CCCCCCCHHHHH
Confidence 7 32 344444433333
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-21 Score=185.24 Aligned_cols=204 Identities=14% Similarity=0.179 Sum_probs=126.1
Q ss_pred cccccccccEEEEEEEccCC-----cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSG-----QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g-----~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|.....+ ..||+|..+....... ...
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~--------------------------------~~~---- 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKV--------------------------------QQE---- 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHH--------------------------------HHH----
Confidence 67999999999999986444 6899998864422111 011
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---------------CCCH--HH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------GLKV--LD 271 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~--~~ 271 (487)
+.+|...+.++. ++++.-..-+.......+++|||++|++|.++...... ..+. ..
T Consensus 55 --~~~ei~~l~~l~-----h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 127 (283)
T cd05048 55 --FRQEAELMSDLQ-----HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFL 127 (283)
T ss_pred --HHHHHHHHHhcC-----CcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHH
Confidence 122222222221 12211111112233567899999999999877543211 1222 23
Q ss_pred HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 272 ~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
.+..++..++.|||+.|++|+|+||+||++++++.++|+|||++..+.......... .....+..++++....+..
T Consensus 128 ~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~ 203 (283)
T cd05048 128 HIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQS----KSLLPVRWMPPEAILYGKF 203 (283)
T ss_pred HHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccC----CCcccccccCHHHhccCcC
Confidence 455778889999999999999999999999999999999999987653321110000 0001122344444444556
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 011399 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (487)
+++.|+||+|+.++++++. ...++...+...+.
T Consensus 204 ~~~sDv~slG~il~el~~~-g~~p~~~~~~~~~~ 236 (283)
T cd05048 204 TTESDIWSFGVVLWEIFSY-GLQPYYGFSNQEVI 236 (283)
T ss_pred chhhhHHHHHHHHHHHHcC-CCCCCCCCCHHHHH
Confidence 8889999999999999861 12344444444433
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.9e-22 Score=192.50 Aligned_cols=192 Identities=19% Similarity=0.173 Sum_probs=120.7
Q ss_pred cccccccccEEEEEEE----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQL----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~----~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||+||++.. ..+|+.||+|+.+....... ..
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~--------------------------------~~------ 51 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQN--------------------------------TS------ 51 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHH--------------------------------HH------
Confidence 6799999999988653 34788999999875421110 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCe-EeceeeecC-CCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKEDV-LVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
.+..|...+.++ +++++ .+...+... ....+++|||++|++|.+..............+..++..++.++|+.
T Consensus 52 ~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~ 126 (283)
T cd05080 52 GWKKEINILKTL-----YHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ 126 (283)
T ss_pred HHHHHHHHHHhC-----CCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 112222222222 12221 111111111 23468999999999998875433333333444557788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.++.++|+|||++..+.......... .........++++....+..+++.|+||+|+.++++
T Consensus 127 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el 203 (283)
T cd05080 127 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR---EDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYEL 203 (283)
T ss_pred CeeccccChheEEEcCCCcEEEeecccccccCCcchhhccC---CCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHH
Confidence 99999999999999999999999999998765432110000 000001112233333345567889999999999999
Q ss_pred HHHh
Q 011399 368 FDDA 371 (487)
Q Consensus 368 ~~~~ 371 (487)
+++.
T Consensus 204 ~tg~ 207 (283)
T cd05080 204 LTHC 207 (283)
T ss_pred HhCC
Confidence 9854
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-21 Score=186.84 Aligned_cols=200 Identities=15% Similarity=0.153 Sum_probs=124.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|..+ ++..+|+|..+.+.... + ++..
T Consensus 10 ~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~----------------------------------~------~~~~ 48 (256)
T cd05114 10 KELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSE----------------------------------E------DFIE 48 (256)
T ss_pred eEecCCcCceEEEEEec-cCceEEEEecccCCccH----------------------------------H------HHHH
Confidence 67999999999999987 77789999876431110 0 1122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
|+..+.++. ++++.-..-+.......++||||++|++|.+.........+. ...+..++..++.|+|..|++|
T Consensus 49 e~~~l~~l~-----h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 123 (256)
T cd05114 49 EAKVMMKLS-----HPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIH 123 (256)
T ss_pred HHHHHHHCC-----CCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 222222221 122211111223345678999999999998775432222333 3344567888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|+||+||+++.++.++++|||++..+.........+......+..||. ....-.+.+.|+||+|+.++++++.
T Consensus 124 ~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~s~G~~l~el~~~- 197 (256)
T cd05114 124 RDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEV-----FNFSKYSSKSDVWSFGVLMWEVFTE- 197 (256)
T ss_pred cccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhh-----cccCccchhhhhHHHHHHHHHHHcC-
Confidence 9999999999999999999999988664321110011111112233333 3333446789999999999999872
Q ss_pred ccCCCCcCcHHHHH
Q 011399 372 LNSSVSELNFKTIV 385 (487)
Q Consensus 372 ~~~~~~~~~~~~~~ 385 (487)
...++...+.....
T Consensus 198 g~~p~~~~~~~~~~ 211 (256)
T cd05114 198 GKMPFEKKSNYEVV 211 (256)
T ss_pred CCCCCCCCCHHHHH
Confidence 12344444433333
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-21 Score=188.08 Aligned_cols=284 Identities=17% Similarity=0.176 Sum_probs=176.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..+|+|.||+|-.+.++.++..||||+++.- +.+.+.. +.
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----------------------------------~kYreAa------~i 134 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKNV----------------------------------DKYREAA------LI 134 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHHH----------------------------------HHHhhHH------HH
Confidence 5699999999999999989999999998621 1111111 12
Q ss_pred HHHHHHHHHHHh-CCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH---hcCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLY-ADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~-~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
|.+.+.++.+.- .+......-.-+.+|.+..+||.|.+ |.++.+....+ ..+.+..+.+..|++.++.+||+.++
T Consensus 135 Ei~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl 213 (415)
T KOG0671|consen 135 EIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKL 213 (415)
T ss_pred HHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcce
Confidence 233333333321 11222333344678889999999988 55666663321 23456778888999999999999999
Q ss_pred cccCCCCCCeEEcCC--------------------CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 011399 290 FHADPHPGNLLATPE--------------------GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349 (487)
Q Consensus 290 vH~Dlkp~Nili~~~--------------------g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (487)
+|-|+||+|||+... -.|+++|||.+..-.+.. ...+.+.-++.||.+ ..+|
T Consensus 214 ~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEVi----LgLG 285 (415)
T KOG0671|consen 214 THTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVI----LGLG 285 (415)
T ss_pred eecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchhe----eccC
Confidence 999999999998531 238999999998766553 122334556666654 4567
Q ss_pred CCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhC-CCCCh--
Q 011399 350 FLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYAD-PNFKV-- 426 (487)
Q Consensus 350 ~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ld-P~~~~-- 426 (487)
+ +...|+||+||.|.|++++..-...-+ +...+ .++....-.+|..+..=.++--... -+ .+| |+...
T Consensus 286 w-S~pCDvWSiGCIL~ElytG~~LFqtHe-n~EHL-----aMMerIlGp~P~~mi~r~~~~Kyf~-~~-rldw~e~~~~~ 356 (415)
T KOG0671|consen 286 W-SQPCDVWSIGCILVELYTGETLFQTHE-NLEHL-----AMMERILGPIPSRMIKKTRKEKYFR-RG-RLDWPEVSSKG 356 (415)
T ss_pred c-CCccCceeeeeEEEEeeccceecccCC-cHHHH-----HHHHHhhCCCcHHHhhhhhhHhhhh-cc-cccCccccccc
Confidence 6 778899999999999987543211111 33332 1222222245665533221111100 01 233 32221
Q ss_pred -----HHhHhHHHHHHhccC-CCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 427 -----LAASYPYFAKRLLTD-PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 427 -----~~~~~p~~~~~l~~~-~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
....+|.-..+...+ .--++-+.++.||..||.+|.+.-+++.|+||+.
T Consensus 357 ~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 357 KSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFAR 411 (415)
T ss_pred cchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhc
Confidence 112333321111111 1225668899999999999999999999999964
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-21 Score=187.62 Aligned_cols=199 Identities=16% Similarity=0.190 Sum_probs=127.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|... ++..||+|..+++.... +. +.+
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~----------------------------------~~------~~~ 50 (260)
T cd05070 12 KKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSP----------------------------------ES------FLE 50 (260)
T ss_pred heeccccCceEEEEEec-CCceeEEEEecCCCCCH----------------------------------HH------HHH
Confidence 67999999999999887 78889999987642110 00 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ .+...+.+...+ .....+++|||++|++|.++..... ...+. ...+..++..++.|+|+.|++
T Consensus 51 E~~~l~~l----~~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~ 124 (260)
T cd05070 51 EAQIMKKL----RHDKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 124 (260)
T ss_pred HHHHHHhc----CCCceEEEEeEE--CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 22222222 112222232222 2355789999999999988754321 12333 344556788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||+||+++.++.++|+|||++..+.........+......+..|| ....+..+.+.|+||+|+.++++++.
T Consensus 125 H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~~l~~l~~~ 199 (260)
T cd05070 125 HRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPE-----AALYGRFTIKSDVWSFGILLTELVTK 199 (260)
T ss_pred cCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChH-----HHhcCCCcchhhhHHHHHHHHHHHhc
Confidence 9999999999999999999999999876433211111111112233344 33344567789999999999999972
Q ss_pred hccCCCCcCcHHHHH
Q 011399 371 ALNSSVSELNFKTIV 385 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~ 385 (487)
...++...+.....
T Consensus 200 -g~~p~~~~~~~~~~ 213 (260)
T cd05070 200 -GRVPYPGMNNREVL 213 (260)
T ss_pred -CCCCCCCCCHHHHH
Confidence 12344444433333
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-21 Score=198.89 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHH-HHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
+..++..++.|+|..|++|+|+||+|||++.++.++|+|||+++.+......... .......+..|| ....+..
T Consensus 242 ~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~ 316 (400)
T cd05105 242 FTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPE-----SIFDNLY 316 (400)
T ss_pred HHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChh-----hhcCCCC
Confidence 4567888999999999999999999999999999999999999866432111000 011111223343 3334556
Q ss_pred CCCCCcchHHHHHHHHHH
Q 011399 352 SPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~ 369 (487)
+++.|+||+|+.++++++
T Consensus 317 ~~~~DiwSlGvil~ellt 334 (400)
T cd05105 317 TTLSDVWSYGILLWEIFS 334 (400)
T ss_pred CchhhHHHHHHHHHHHHH
Confidence 788999999999999986
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-21 Score=196.72 Aligned_cols=214 Identities=19% Similarity=0.229 Sum_probs=158.6
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.+.||+|-||.||+|... .+..||||..||+.......|+ .++++. +...+|||+++++..+..
T Consensus 543 ~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F--~kEIki----LsqLkhPNIveLvGVC~~--------- 606 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDF--LKEIKI----LSRLKHPNIVELLGVCVQ--------- 606 (807)
T ss_pred hhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHH--HHHHHH----HhccCCCCeeEEEeeeec---------
Confidence 377999999999999986 6799999999998655443322 112211 122347777766654321
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC-C--HHHHHHHHHHHHHHHHHHCCc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL-K--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~-~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
..+.+++|||++.|+|.++...+.... + ..--+..+|.++++||.+.+|
T Consensus 607 ----------------------------DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nf 658 (807)
T KOG1094|consen 607 ----------------------------DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNF 658 (807)
T ss_pred ----------------------------CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhch
Confidence 256689999999999999865543222 1 223356889999999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+-+.|+|++.++++|++||||++.+-.......-| .+--...+++.+-+-+|-.+...|+|++|.+++|++.
T Consensus 659 VHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqg----r~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~ 734 (807)
T KOG1094|consen 659 VHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQG----RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFM 734 (807)
T ss_pred hhccccccceeecCcccEEecCcccccccccCCceeeec----ceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHH
Confidence 999999999999999999999999999764432211111 1112244566666678988999999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhh
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQ 394 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~ 394 (487)
.-...|.++..-.++++..+.++..
T Consensus 735 ~C~e~Py~~lt~e~vven~~~~~~~ 759 (807)
T KOG1094|consen 735 LCREQPYSQLTDEQVVENAGEFFRD 759 (807)
T ss_pred HHhhCchhhhhHHHHHHhhhhhcCC
Confidence 8788899999888999988887664
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-21 Score=187.77 Aligned_cols=185 Identities=15% Similarity=0.178 Sum_probs=121.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|... +++.||+|...+..... +. +..
T Consensus 12 ~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~----------------------------------~~------~~~ 50 (261)
T cd05072 12 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSV----------------------------------QA------FLE 50 (261)
T ss_pred eecCCcCCceEEEEEec-CCceEEEEEccCCchhH----------------------------------HH------HHH
Confidence 67999999999999986 78889999876532110 01 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHH--HHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLD--LVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~--~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ +++.+.-..-........+++|||++|++|.++..... ....... .+..++..++.|+|..|++
T Consensus 51 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~ 125 (261)
T cd05072 51 EANLMKTL-----QHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 125 (261)
T ss_pred HHHHHHhC-----CCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 22222221 12222221112233456789999999999988754332 2233333 3456788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||+||+++.++.++|+|||++..+............... ..++++....+..+++.|+||+|+.++++++
T Consensus 126 H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~-----~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t 199 (261)
T cd05072 126 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-----KWTAPEAINFGSFTIKSDVWSFGILLYEIVT 199 (261)
T ss_pred ccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccce-----ecCCHHHhccCCCChhhhhhhhHHHHHHHHc
Confidence 9999999999999999999999999876543211001100111 2233333445556778999999999999996
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-21 Score=186.01 Aligned_cols=195 Identities=16% Similarity=0.108 Sum_probs=119.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+|+.||||+.+......- ....+ .. +.+
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~--~~~~~--------------------------~~------~~~ 53 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPE--TSKEV--------------------------NA------LEC 53 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcc--cHHHH--------------------------HH------HHH
Confidence 679999999999999988899999998763211100 00000 01 122
Q ss_pred HHHHHHHHHHHhCCCCCe-Eeceeeec-CCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++. ++++ .+...+.+ .....+++|||++|++|.+...... ........+..++..++.++|+.|++
T Consensus 54 E~~~l~~l~-----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 128 (265)
T cd06652 54 EIQLLKNLL-----HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIV 128 (265)
T ss_pred HHHHHHhcC-----CCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 223222221 1221 11111111 1234579999999999988743221 12223344557788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||.||+++.+|.++|+|||++..+....... .+. ....+....++++.+...-.+.+.|+||+|+.+++++++
T Consensus 129 H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~-~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g 205 (265)
T cd06652 129 HRDIKGANILRDSVGNVKLGDFGASKRLQTICLSG-TGM--KSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTE 205 (265)
T ss_pred cCCCCHHHEEecCCCCEEECcCccccccccccccc-ccc--ccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhC
Confidence 99999999999999999999999988654211000 000 000111122233333333457789999999999999974
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-21 Score=186.50 Aligned_cols=187 Identities=15% Similarity=0.113 Sum_probs=116.7
Q ss_pred cccccccccEEEEEEEccCCc--EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ--IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~--~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|++|.||+|+++.+|. .+++|..+........ . ++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~--------------------------------~------~~ 42 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--------------------------------R------DF 42 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHH--------------------------------H------HH
Confidence 358999999999999987775 4688877633211100 0 11
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-----------------cCCCHHHHHH
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-----------------QGLKVLDLVN 274 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-----------------~~~~~~~~~~ 274 (487)
..|...+.++. +++++.-..-+....+..+++|||++|++|.++..... ........+.
T Consensus 43 ~~E~~~l~~l~----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 118 (270)
T cd05047 43 AGELEVLCKLG----HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 118 (270)
T ss_pred HHHHHHHHhhc----cCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH
Confidence 22222222221 12222111111222355789999999999988754321 1112233455
Q ss_pred HHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 011399 275 TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (487)
Q Consensus 275 ~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (487)
.++..++.|+|+.|++|+|+||.||+++.++.++++|||++........... .......++++.......+.+
T Consensus 119 ~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~-------~~~~~~y~apE~~~~~~~~~~ 191 (270)
T cd05047 119 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-------GRLPVRWMAIESLNYSVYTTN 191 (270)
T ss_pred HHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhhhccC-------CCCccccCChHHHccCCCCch
Confidence 6778899999999999999999999999999999999999864332111100 000112233333344456788
Q ss_pred CCcchHHHHHHHHHH
Q 011399 355 VDVTPIVPALRNFFD 369 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~ 369 (487)
.|+||+|+.++++++
T Consensus 192 ~Di~slG~il~el~~ 206 (270)
T cd05047 192 SDVWSYGVLLWEIVS 206 (270)
T ss_pred hhHHHHHHHHHHHHc
Confidence 999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-21 Score=186.75 Aligned_cols=250 Identities=14% Similarity=0.101 Sum_probs=153.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.||+|+.......... . ..+....+.+....|++++++.+.+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~--~---~~~~~e~~~l~~l~~~~i~~~~~~~------------ 68 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKE--K---QQLVSEVNILRELKHPNIVRYYDRI------------ 68 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHH--H---HHHHHHHHHHHhcCCCccceeeeee------------
Confidence 6799999999999999889999999988643111100 0 0000011111111233333322211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH---hcCCCHH--HHHHHHHHHHHHHHH---
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKVL--DLVNTGIQCSLRQLL--- 285 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~~--~~~~~~i~~~l~~lh--- 285 (487)
........+++|||++|++|.++.... ....+.. ..+..++..++.++|
T Consensus 69 -----------------------~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 125 (265)
T cd08217 69 -----------------------IDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRS 125 (265)
T ss_pred -----------------------ecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCc
Confidence 011123458999999999998875432 1223333 344567888999999
Q ss_pred --HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 286 --EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 286 --~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
..|++|+|+||+||+++.+|.++|+|||++..+...... .... .+.+..++++....+..+...|+|++|+.
T Consensus 126 ~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-~~~~-----~~~~~~~~pE~~~~~~~~~~~Dv~slG~i 199 (265)
T cd08217 126 DPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSF-AKTY-----VGTPYYMSPEQLNHMSYDEKSDIWSLGCL 199 (265)
T ss_pred cccCcceecCCCHHHEEEecCCCEEEecccccccccCCccc-cccc-----ccCCCccChhhhcCCCCCchhHHHHHHHH
Confidence 999999999999999999999999999999887543210 0001 11222233333344445778999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++. .++...+...+...+. ....|. +....+
T Consensus 200 l~~l~~g~--~p~~~~~~~~~~~~~~----------------------------~~~~~~--------------~~~~~~ 235 (265)
T cd08217 200 IYELCALS--PPFTARNQLQLASKIK----------------------------EGKFRR--------------IPYRYS 235 (265)
T ss_pred HHHHHHCC--CcccCcCHHHHHHHHh----------------------------cCCCCC--------------CccccC
Confidence 99998743 2333333222111110 000010 111345
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+.+++.+.+||..+|..|.+..+-+.|+|.
T Consensus 236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 236 SELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 677888899999999999988888888763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-21 Score=195.88 Aligned_cols=237 Identities=18% Similarity=0.209 Sum_probs=155.6
Q ss_pred cccccccccEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|.||.||+|+++..+. .||||..+-..... -.+-.
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~------------------------------------~~~~~ 206 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELT------------------------------------KEQIK 206 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeeccccccc------------------------------------HHHHH
Confidence 789999999999999974422 38999876311000 00112
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
+|.+||+-+..+. |++|.--.-+.....+.+||||+|.||+|.++.......++..+ .+..+...|++|||..
T Consensus 207 e~m~EArvMr~l~-----H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k 281 (474)
T KOG0194|consen 207 EFMKEARVMRQLN-----HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK 281 (474)
T ss_pred HHHHHHHHHHhCC-----CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC
Confidence 3666776665542 22222111123456888999999999999998554433355444 3446677799999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
+++||||-..|+|++.++.+|++|||+++.-+.- .....+ .-...+++++.+..|..++++|+||+|+.++|
T Consensus 282 ~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~-------klPirWLAPEtl~~~~~s~kTDV~sfGV~~~E 354 (474)
T KOG0194|consen 282 NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLK-------KLPIRWLAPETLNTGIFSFKTDVWSFGVLLWE 354 (474)
T ss_pred CCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccc-------cCcceecChhhhccCccccccchhheeeeEEe
Confidence 9999999999999999999999999998765411 111011 12345677777888889999999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhh--CCCCCChHHHHHHHHHHHHHHhhhhhCCCCCh
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQ--YPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (487)
+++.-.. |..+.....+...+..--+. .+...|+.+..++. -+...+|+.+.
T Consensus 355 if~~g~~-Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~-------~c~~~~p~~R~ 408 (474)
T KOG0194|consen 355 IFENGAE-PYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMK-------QCWKKDPEDRP 408 (474)
T ss_pred eeccCCC-CCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHH-------HhccCChhhcc
Confidence 9985443 77777766666555332222 22334444433333 23556665544
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.4e-21 Score=206.44 Aligned_cols=204 Identities=16% Similarity=0.209 Sum_probs=141.7
Q ss_pred cccccccccEEEEEEEccC-Cc----EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYS-GQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~-g~----~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
..||+|.||.||.|..... |. .||||.+++... ..++
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~--------------------------------------~~~~ 739 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS--------------------------------------EQEV 739 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCC--------------------------------------HHHH
Confidence 6799999999999998632 32 489998875422 2234
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH------hcCCCHHHHHH--HHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE------SQGLKVLDLVN--TGIQCS 280 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~------~~~~~~~~~~~--~~i~~~ 280 (487)
.+|++||..|.+|.+. +-+..-.|-.+ ....+|++|||+||+|..+++.. ...+...+++. .+++.+
T Consensus 740 ~~Fl~Ea~~m~~f~Hp----Niv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G 814 (1025)
T KOG1095|consen 740 SDFLKEALLMSKFDHP----NIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKG 814 (1025)
T ss_pred HHHHHHHHHHhcCCCc----ceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhh
Confidence 4577777776655321 11222222222 57788999999999999886654 33455666554 557779
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
++||+++++|||||-..|+|++....+|++|||||+.+-........+- +.....+|+++...-|+.+.++|+|||
T Consensus 815 ~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~----a~lPvkWm~PEsl~d~iFtskSDvWsF 890 (1025)
T KOG1095|consen 815 MNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGE----AMLPVKWMPPESLKDGIFTSKSDVWSF 890 (1025)
T ss_pred hHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCc----cccceecCCHHHHhhcccccccchhhh
Confidence 9999999999999999999999999999999999996544432211111 111234556666666888999999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHH
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIV 385 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (487)
|+.++|+++.- ..|..+.+..+++
T Consensus 891 GVllWEifslG-~~PY~~~~n~~v~ 914 (1025)
T KOG1095|consen 891 GVLLWEIFSLG-ATPYPSRSNFEVL 914 (1025)
T ss_pred HHHHHHHHhCC-CCCCCCcchHHHH
Confidence 99999999842 2455555544444
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-21 Score=186.71 Aligned_cols=122 Identities=12% Similarity=0.121 Sum_probs=86.0
Q ss_pred ceEEEeecCCCCcCcHHHHHhc-----CCC--HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCC
Q 011399 244 KVLTMEWVEGVKLNEQVAIESQ-----GLK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 316 (487)
Q Consensus 244 ~~LvmE~~~G~~L~~~~~~~~~-----~~~--~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~ 316 (487)
.+++|||+++++|......... ..+ ....+..++..++.|+|+.|++|+|+||+||++++++.++|+|||+++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCcccee
Confidence 5899999999999877543221 122 233455778889999999999999999999999999999999999988
Q ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 317 ETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 317 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
.+......... .........++++....+..+.+.|+||+|+.++++++
T Consensus 162 ~~~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~ 210 (273)
T cd05035 162 KIYSGDYYRQG----RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 210 (273)
T ss_pred ecccccccccc----ccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHh
Confidence 76433111000 00001112233333334556788999999999999987
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-21 Score=186.79 Aligned_cols=201 Identities=13% Similarity=0.136 Sum_probs=128.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|.||++....+|+.||+|..+...... .. +. +..
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~~-----------------------------~~------~~~ 47 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS---AV-----------------------------ED------SRK 47 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH---HH-----------------------------HH------HHH
Confidence 67999999999999999899999999986321110 00 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ +++++.-..-.....+..+++|||++|+++.+...... ...+. ...+..++..++.++|++|++
T Consensus 48 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~ 122 (255)
T cd08219 48 EAVLLAKM-----KHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVL 122 (255)
T ss_pred HHHHHHhC-----CCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 11111111 12222111112233466799999999999977643322 12233 334457788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||.||++++++.++++|||++..+....... . ...+.+..++++.+.....+++.|+||+|+.+++++++
T Consensus 123 H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~-~-----~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g 196 (255)
T cd08219 123 HRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA-C-----TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTL 196 (255)
T ss_pred cCCCCcceEEECCCCcEEEcccCcceeeccccccc-c-----cccCCccccCHHHHccCCcCchhhhhhhchhheehhhc
Confidence 99999999999999999999999987664321110 0 01122223334444444467889999999999999975
Q ss_pred hccCCCCcCcHHHHH
Q 011399 371 ALNSSVSELNFKTIV 385 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~ 385 (487)
. .|+...+.....
T Consensus 197 ~--~p~~~~~~~~~~ 209 (255)
T cd08219 197 K--HPFQANSWKNLI 209 (255)
T ss_pred c--CCCCCCCHHHHH
Confidence 4 355444444433
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-21 Score=185.23 Aligned_cols=198 Identities=14% Similarity=0.131 Sum_probs=125.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|..+ +++.||+|..+...... . ++..
T Consensus 12 ~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~----------------------------------~------~~~~ 50 (260)
T cd05067 12 KKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSP----------------------------------E------AFLA 50 (260)
T ss_pred eeeccCccceEEeeecC-CCceEEEEEecCCCCcH----------------------------------H------HHHH
Confidence 67999999999999987 88999999987542110 0 1122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++. +..-+.+...+ .....+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 51 E~~~l~~l~----h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~ 124 (260)
T cd05067 51 EANLMKQLQ----HPRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYI 124 (260)
T ss_pred HHHHHHhcC----CcCeeeEEEEE--ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 222222221 11111222222 1245789999999999988744322 223333 33456788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||.||+++.++.++|+|||++............+......+..|+ ....+..+++.|+||+|+.++++++.
T Consensus 125 H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe-----~~~~~~~~~~~Di~slG~~l~el~~~ 199 (260)
T cd05067 125 HRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-----AINYGTFTIKSDVWSFGILLTEIVTY 199 (260)
T ss_pred cccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHH-----HhccCCcCcccchHHHHHHHHHHHhC
Confidence 9999999999999999999999999876532111101111112233333 33455567889999999999999872
Q ss_pred hccCCCCcCcHHHH
Q 011399 371 ALNSSVSELNFKTI 384 (487)
Q Consensus 371 ~~~~~~~~~~~~~~ 384 (487)
...|+...+....
T Consensus 200 -g~~p~~~~~~~~~ 212 (260)
T cd05067 200 -GRIPYPGMTNPEV 212 (260)
T ss_pred -CCCCCCCCChHHH
Confidence 2234444443333
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-21 Score=188.20 Aligned_cols=204 Identities=16% Similarity=0.180 Sum_probs=124.2
Q ss_pred cccccccccEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|.... +++.||||+.+.......... +......+....|++++.+++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~------~~~e~~~~~~l~h~~iv~~~~--------- 75 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREE------FKHEAMMRSRLQHPNIVCLLG--------- 75 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHH------HHHHHHHHhcCCCCCcCeEEE---------
Confidence 569999999999998753 357899999874422211000 000000001111222222211
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---------------cCCCH--HH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLKV--LD 271 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~--~~ 271 (487)
. .......++++||+.+++|.++...+. ...+. ..
T Consensus 76 ---------------------------~-~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (283)
T cd05091 76 ---------------------------V-VTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFV 127 (283)
T ss_pred ---------------------------E-EcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHH
Confidence 1 122345689999999999887753221 11222 23
Q ss_pred HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 272 ~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
.+..++..++.|+|++|++|||+||.||++++++.++|+|||+++.+.........+.. ...+..++++....+..
T Consensus 128 ~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~----~~~~~y~aPE~~~~~~~ 203 (283)
T cd05091 128 HIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNS----LLPIRWMSPEAIMYGKF 203 (283)
T ss_pred HHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCc----cCCccccCHHHHhcCCC
Confidence 34567888999999999999999999999999999999999998876443211111100 01122333333345556
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 011399 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (487)
+++.|+||+|+.++++++. ...++...+...+.
T Consensus 204 ~~~~Dv~slG~~l~el~~~-g~~p~~~~~~~~~~ 236 (283)
T cd05091 204 SIDSDIWSYGVVLWEVFSY-GLQPYCGYSNQDVI 236 (283)
T ss_pred CcchhHHHHHHHHHHHHcC-CCCCCCCCCHHHHH
Confidence 8889999999999999862 12344444444333
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.3e-21 Score=184.12 Aligned_cols=204 Identities=16% Similarity=0.196 Sum_probs=125.6
Q ss_pred cccccccccEEEEEEEccC---CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYS---GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~---g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|+++.+ ...||||+.++........++ ++.+. .+....|+++.++.+
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~--~~e~~----~l~~l~h~~i~~~~~----------- 72 (266)
T cd05033 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDF--LTEAS----IMGQFDHPNIIRLEG----------- 72 (266)
T ss_pred eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHH--HHHHH----HHHhCCCCCcceEeE-----------
Confidence 7899999999999998643 468999998755322111110 00000 001111233222221
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~g 288 (487)
.+ ......+++|||++|++|.++........+... .+..++..++.++|+.|
T Consensus 73 -------------------------~~-~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 126 (266)
T cd05033 73 -------------------------VV-TKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN 126 (266)
T ss_pred -------------------------EE-ecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 11 123556899999999999887544332334333 34467788999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|+||.||+++.++.++|+|||++..+...... +... ........++++....+..+++.|+||+|+.+++++
T Consensus 127 i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~---~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~ 202 (266)
T cd05033 127 YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT-YTTK---GGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVM 202 (266)
T ss_pred cccCCCCcceEEEcCCCCEEECccchhhcccccccc-eecc---CCCCCccccChhhhccCCCccccchHHHHHHHHHHH
Confidence 999999999999999999999999999887421110 0000 000112233344444455678899999999999988
Q ss_pred HHhccCCCCcCcHHHHH
Q 011399 369 DDALNSSVSELNFKTIV 385 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~ 385 (487)
.. ...++.......+.
T Consensus 203 ~~-g~~p~~~~~~~~~~ 218 (266)
T cd05033 203 SY-GERPYWDMSNQDVI 218 (266)
T ss_pred cc-CCCCCCCCCHHHHH
Confidence 51 12344444444333
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.9e-21 Score=189.39 Aligned_cols=276 Identities=11% Similarity=0.111 Sum_probs=154.0
Q ss_pred cccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 011399 140 SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNAR 219 (487)
Q Consensus 140 s~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~ 219 (487)
+.|.||.++...+|+.||||+.+...... .+ +..+...++.+....|++++.+++.+.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~--~~---~~~~~~Ei~~l~~l~h~~i~~~~~~~~----------------- 69 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSK--ED---LKLLQQEIITSRQLQHPNILPYVTSFI----------------- 69 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccch--hH---HHHHHHHHHHHHhcCCcchhhhhheee-----------------
Confidence 44555666666589999999987541111 01 111111122222234666666655332
Q ss_pred HHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCC--HHHHHHHHHHHHHHHHHHCCccccCCCC
Q 011399 220 RFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLK--VLDLVNTGIQCSLRQLLEYGYFHADPHP 296 (487)
Q Consensus 220 ~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~--~~~~~~~~i~~~l~~lh~~givH~Dlkp 296 (487)
.....+++|||++++++.++..... .+.+ ....+..++..++.|||++|++|+|+||
T Consensus 70 --------------------~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~ 129 (314)
T cd08216 70 --------------------VDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKA 129 (314)
T ss_pred --------------------cCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCc
Confidence 1245689999999999988754321 2233 3344557888899999999999999999
Q ss_pred CCeEEcCCCcEEEEecCCCCCCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcchHHHHHHHHHHHhc
Q 011399 297 GNLLATPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYAL--DFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 297 ~Nili~~~g~i~l~DFGla~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
+||+++.+|.++++|||.+..+...... ...... .........++++.... .-.+++.|+||+|+.+++++++.
T Consensus 130 ~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~- 207 (314)
T cd08216 130 SHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP-KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGH- 207 (314)
T ss_pred ceEEEecCCceEEecCccceeecccccccccccccc-ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCC-
Confidence 9999999999999999988765432110 000000 00111112233333322 22467899999999999999743
Q ss_pred cCCCCcCcHHHH-HHHHHHHHhhCCCCCChHHHHHHHHHHHHHH-hhh----hhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 373 NSSVSELNFKTI-VDGLGAVLYQYPFNVPAYYALILRSLTVLEG-LAL----YADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 373 ~~~~~~~~~~~~-~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg-~~~----~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
.|+...+.... ...+.. ..|..+. ........+ ... ..++.. ....+ .......+++.
T Consensus 208 -~pf~~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~ 271 (314)
T cd08216 208 -VPFKDMPATQMLLEKVRG-------TVPCLLD--KSTYPLYEDSMSQSRSSNEHPNN---RDSVD---HPYTRTFSEHF 271 (314)
T ss_pred -CCCCCCCHHHHHHHHHhc-------cCccccc--cCchhhhcCCcCcccccccccch---hhhhh---cchhhHHHHHH
Confidence 34443332211 111100 0010000 000000000 000 000000 00000 00111235788
Q ss_pred HHHHHHHHhhcCcccccccchhhcccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
++.+..||..||..|++..+.+.|+||.-
T Consensus 272 ~~li~~~l~~~P~~Rpt~~~ll~~p~~~~ 300 (314)
T cd08216 272 HQFVELCLQRDPESRPSASQLLNHSFFKQ 300 (314)
T ss_pred HHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence 89999999999999999999999999953
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-21 Score=186.64 Aligned_cols=183 Identities=16% Similarity=0.176 Sum_probs=120.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|.+. +++.+|+|.++.+.... -++..
T Consensus 10 ~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~----------------------------------------~~~~~ 48 (256)
T cd05112 10 QEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSE----------------------------------------EDFIE 48 (256)
T ss_pred eeecCcccceEEEEEEe-CCCeEEEEECCCCCCCH----------------------------------------HHHHH
Confidence 67999999999999986 68899999886442110 01222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (487)
|.+.+.++ +++. +.+++ .......+++|||++|++|.++........... ..+..++..++.++|+.|+
T Consensus 49 e~~~l~~l-----~~~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 121 (256)
T cd05112 49 EAQVMMKL-----SHPK--LVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV 121 (256)
T ss_pred HHHHHHhC-----CCCC--eeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 22222222 1222 22222 233456789999999999987754332223333 3344677789999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.++.++|+|||++............+......+..|+ ....+..+...|+||+|+.+++++.
T Consensus 122 ~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe-----~~~~~~~~~~~Dv~slG~~l~el~~ 196 (256)
T cd05112 122 IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPE-----VFSFSKYSSKSDVWSFGVLMWEVFS 196 (256)
T ss_pred cccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHh-----HhccCCcChHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999998765432111101111112223333 3334556778999999999999886
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.4e-21 Score=184.50 Aligned_cols=123 Identities=14% Similarity=0.133 Sum_probs=88.4
Q ss_pred CceEEEeecCCCCcCcHHHHHhc-----CCCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCC
Q 011399 243 GKVLTMEWVEGVKLNEQVAIESQ-----GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMM 315 (487)
Q Consensus 243 ~~~LvmE~~~G~~L~~~~~~~~~-----~~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla 315 (487)
..+++|||++|++|.+....... ..+. ...+..++..++.|+|++|++|+|+||+||++++++.++|+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 46899999999999876432221 1223 3345577888999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 316 SETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 316 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+.+....... . .......++.++++....+..+++.|+||+|+.+++++.
T Consensus 160 ~~~~~~~~~~-~---~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~ 209 (272)
T cd05075 160 KKIYNGDYYR-Q---GRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT 209 (272)
T ss_pred cccCccccee-c---CCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHc
Confidence 8764332100 0 011122334444444444556888999999999999986
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-21 Score=185.23 Aligned_cols=188 Identities=16% Similarity=0.176 Sum_probs=119.2
Q ss_pred ccccccccEEEEEEEc--cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 135 PIAAASLGQVYKAQLK--YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.||+|+||.||+|.++ .++..||||+..+....... +. +.
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~--------------------------------~~------~~ 43 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVR--------------------------------DE------MM 43 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHH--------------------------------HH------HH
Confidence 3899999999999875 34667999998754221110 11 22
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~giv 290 (487)
+|+..+.++ .+..-+.+..+. + ....++||||++|++|.++........+.. ..+..++..++.++|..|++
T Consensus 44 ~E~~~l~~l----~h~~ii~~~~~~-~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 117 (257)
T cd05115 44 REAEIMHQL----DNPYIVRMIGVC-E-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFV 117 (257)
T ss_pred HHHHHHHhc----CCCCeEEEEEEE-c-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCee
Confidence 222222222 111122222222 1 245689999999999988754333334433 34456778899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||+||+++.++.++|+|||++..+........... .....+..++++....+..+.+.|+||+|+.+++++.
T Consensus 118 H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 193 (257)
T cd05115 118 HRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS---AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFS 193 (257)
T ss_pred ecccchheEEEcCCCcEEeccCCccccccCCccceeccC---CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhc
Confidence 999999999999999999999999986543321100000 0000112233333444556778999999999999885
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-20 Score=186.65 Aligned_cols=199 Identities=15% Similarity=0.122 Sum_probs=120.5
Q ss_pred cccccccccEEEEEEEccCCc--EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhc-ccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ--IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~--~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|.++.+|. .+++|..+.........+ +....+.+... .|++++++.+.
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~------~~~E~~~l~~l~~hp~iv~~~~~---------- 71 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRD------FAGELEVLCKLGHHPNIINLLGA---------- 71 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHH------HHHHHHHHHhhcCCCchhheEEE----------
Confidence 679999999999999876665 478887763221110000 00000000011 13333333321
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---------------cCCC--HHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLK--VLDLV 273 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~--~~~~~ 273 (487)
.......+++|||+++++|.++..... .... ....+
T Consensus 72 ---------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 124 (297)
T cd05089 72 ---------------------------CENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQF 124 (297)
T ss_pred ---------------------------EccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHH
Confidence 112345689999999999988753321 0122 23345
Q ss_pred HHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 011399 274 NTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSP 353 (487)
Q Consensus 274 ~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (487)
..++..+++++|+.|++|+|+||+||+++.++.++|+|||++.............. ...+..|+ ....+..+.
T Consensus 125 ~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~--~~~y~aPE-----~~~~~~~~~ 197 (297)
T cd05089 125 ASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRL--PVRWMAIE-----SLNYSVYTT 197 (297)
T ss_pred HHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCc--CccccCch-----hhccCCCCc
Confidence 57788899999999999999999999999999999999999865332111100000 01122333 333444577
Q ss_pred CCCcchHHHHHHHHHHHhccCCCCcCcHHH
Q 011399 354 DVDVTPIVPALRNFFDDALNSSVSELNFKT 383 (487)
Q Consensus 354 ~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~ 383 (487)
++|+||+|+.++++++. ...++...+...
T Consensus 198 ~~DvwSlG~il~el~t~-g~~pf~~~~~~~ 226 (297)
T cd05089 198 KSDVWSFGVLLWEIVSL-GGTPYCGMTCAE 226 (297)
T ss_pred hhhHHHHHHHHHHHHcC-CCCCCCCCCHHH
Confidence 89999999999999861 123444444333
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=190.10 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 272 ~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
.+..++..++.|+|+.||+|||+||+||+++.++.++|+|||++..+.........+. .......++++...-+..
T Consensus 177 ~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~ 252 (337)
T cd05054 177 SYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD----ARLPLKWMAPESIFDKVY 252 (337)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccC----CCCCccccCcHHhcCCCC
Confidence 4457788899999999999999999999999999999999999987643321110000 011112333333334456
Q ss_pred CCCCCcchHHHHHHHHHH
Q 011399 352 SPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~ 369 (487)
+++.|+||+|+.++++++
T Consensus 253 ~~~~Di~SlGv~l~el~t 270 (337)
T cd05054 253 TTQSDVWSFGVLLWEIFS 270 (337)
T ss_pred CccccHHHHHHHHHHHHH
Confidence 788999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.4e-21 Score=183.71 Aligned_cols=191 Identities=16% Similarity=0.134 Sum_probs=124.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.. .|+.||||..+.... . . +.+ ..
T Consensus 12 ~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~-------~--------------------------~~~------~~ 49 (256)
T cd05039 12 ATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-A-------A--------------------------QAF------LA 49 (256)
T ss_pred eeeecCCCceEEEEEe--cCcEEEEEEeccchh-H-------H--------------------------HHH------HH
Confidence 6799999999999987 489999999864421 0 0 111 11
Q ss_pred HHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++ +++.+ .+... ....+..++||||++|++|.++..... ........+..++..++.++|..|+
T Consensus 50 e~~~l~~l-----~~~~i~~~~~~-~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i 123 (256)
T cd05039 50 EASVMTTL-----RHPNLVQLLGV-VLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNF 123 (256)
T ss_pred HHHHHHhc-----CCcceeeeEEE-EcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 11111111 11221 11111 222567799999999999988754332 2233444555778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||.+......... ......+..|+ ....+..+.+.|+||+|+.+++++.
T Consensus 124 ~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~----~~~~~~~~ape-----~~~~~~~~~~~Di~slG~il~~l~~ 194 (256)
T cd05039 124 VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDS----GKLPVKWTAPE-----ALREKKFSTKSDVWSFGILLWEIYS 194 (256)
T ss_pred cchhcccceEEEeCCCCEEEccccccccccccccc----CCCcccccCch-----hhcCCcCCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999887433211 00011122333 3334556778999999999999986
Q ss_pred -HhccCCCCcCcHHH
Q 011399 370 -DALNSSVSELNFKT 383 (487)
Q Consensus 370 -~~~~~~~~~~~~~~ 383 (487)
+. .++...+...
T Consensus 195 ~g~--~p~~~~~~~~ 207 (256)
T cd05039 195 FGR--VPYPRIPLKD 207 (256)
T ss_pred cCC--CCCCCCCHHH
Confidence 32 3444444443
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-20 Score=186.63 Aligned_cols=264 Identities=17% Similarity=0.161 Sum_probs=157.4
Q ss_pred HhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHH
Q 011399 119 ELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALI 198 (487)
Q Consensus 119 ~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~ 198 (487)
-+....+..|+.. +.||.|++|+||+|+.+.+|+.||+|..+......-.
T Consensus 8 ~~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~---------------------------- 57 (308)
T cd06634 8 FFKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE---------------------------- 57 (308)
T ss_pred hhcCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChH----------------------------
Confidence 3444566667665 6799999999999999888999999988632110000
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHH
Q 011399 199 DEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTG 276 (487)
Q Consensus 199 ~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~ 276 (487)
.... +..|...+..+. +...+.+.. +.......++||||+.| ++.+.........+... .+..+
T Consensus 58 --~~~~------~~~e~~~l~~l~----h~~i~~~~~-~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~ 123 (308)
T cd06634 58 --KWQD------IIKEVRFLQKLR----HPNTIQYRG-CYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHG 123 (308)
T ss_pred --HHHH------HHHHHHHHHhCC----CCCcccEEE-EEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHH
Confidence 0000 112222222221 111111111 11224567899999975 66555433333344333 34467
Q ss_pred HHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 277 i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
+..++.++|..|++|+|++|.||+++.+|.++++|||++..+.+... ..+ ...+..||.+.. ...+..+.+.|
T Consensus 124 l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~---~~~y~aPE~~~~--~~~~~~~~~~D 196 (308)
T cd06634 124 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX--FVG---TPYWMAPEVILA--MDEGQYDGKVD 196 (308)
T ss_pred HHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCccc--ccC---CccccCHHHHhh--cccCCCCcccc
Confidence 78899999999999999999999999999999999999887654321 111 122333443211 01244577899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++.. ++...+.......+ . ....|...
T Consensus 197 i~slG~il~el~~g~~--p~~~~~~~~~~~~~---~-------------------------~~~~~~~~----------- 235 (308)
T cd06634 197 VWSLGITCIELAERKP--PLFNMNAMSALYHI---A-------------------------QNESPALQ----------- 235 (308)
T ss_pred hHHHHHHHHHHHcCCC--CCccccHHHHHHHH---h-------------------------hcCCCCcC-----------
Confidence 9999999999987432 32222111101000 0 00001100
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
....+..+++.+.+||..+|..|.+..+-+.|+|+-..
T Consensus 236 --~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 236 --SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred --cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 11235567778888888888888888888888887543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.4e-21 Score=185.54 Aligned_cols=184 Identities=17% Similarity=0.172 Sum_probs=119.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+||+|.+. ++..||+|..+++.... +. +.+
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~lK~~~~~~~~~----------------------------------~~------~~~ 50 (260)
T cd05069 12 VKLGQGCFGEVWMGTWN-GTTKVAIKTLKPGTMMP----------------------------------EA------FLQ 50 (260)
T ss_pred eeecCcCCCeEEEEEEc-CCceEEEEEcccCCccH----------------------------------HH------HHH
Confidence 57999999999999987 55679999887542100 00 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-CCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|.+.+.++ .+...+.+...+ .....+++|||++|++|.++...... ..+. ...+..++..++.|+|+.|++
T Consensus 51 E~~~l~~l----~h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~ 124 (260)
T cd05069 51 EAQIMKKL----RHDKLVPLYAVV--SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYI 124 (260)
T ss_pred HHHHHHhC----CCCCeeeEEEEE--cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 22222221 111222222222 23457899999999999887543211 1232 334456788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||+||++++++.++|+|||++..+.........+......+..|+ ....+..+.+.|+||+|+.++++++
T Consensus 125 H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe-----~~~~~~~~~~~Di~slG~~l~el~t 198 (260)
T cd05069 125 HRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPE-----AALYGRFTIKSDVWSFGILLTELVT 198 (260)
T ss_pred ecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHH-----HhccCCcChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999766432211111111112233344 3334556778999999999999987
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.7e-20 Score=177.91 Aligned_cols=245 Identities=13% Similarity=0.092 Sum_probs=155.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|.||++..+.+|+.+|+|+.......... ....++. .+.+....|++++.+.+.+..
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-~~~~~~e----~~~l~~l~~~~i~~~~~~~~~---------- 70 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKE-REDAVNE----IRILASVNHPNIISYKEAFLD---------- 70 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHH-HHHHHHH----HHHHHhCCCCCchhhhhhhcc----------
Confidence 6799999999999999889999999998653211100 0111111 111222336666665543321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHHH--HHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLD--LVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~--~~~~~i~~~l~~lh~~g 288 (487)
....++||||++|++|.++..... ...+... .+..++..++.++|+.|
T Consensus 71 ---------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~ 123 (256)
T cd08530 71 ---------------------------GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK 123 (256)
T ss_pred ---------------------------CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 245689999999999988744321 2233333 34456788999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|++|.||+++.++.++|+|||++.......... ..+++..++++.+.....+++.|+||+|+.+++++
T Consensus 124 i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~--------~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~ 195 (256)
T cd08530 124 ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT--------QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMA 195 (256)
T ss_pred cccCCCCcceEEEecCCcEEEeeccchhhhccCCccc--------ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999987765431111 11122233333443444567899999999999998
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
.+. .++...+...+...+.. ..-|.. ....+.++++
T Consensus 196 ~g~--~p~~~~~~~~~~~~~~~----------------------------~~~~~~--------------~~~~~~~~~~ 231 (256)
T cd08530 196 TFA--PPFEARSMQDLRYKVQR----------------------------GKYPPI--------------PPIYSQDLQN 231 (256)
T ss_pred hCC--CCCCCCCHHHHHHHHhc----------------------------CCCCCC--------------chhhCHHHHH
Confidence 743 34443332221111100 000000 0123466788
Q ss_pred HHHHHHhhcCcccccccchhhccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINL 472 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~ 472 (487)
.+.+||..+|..|.+..+-+.||.
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhcCCC
Confidence 888999999999999888877764
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.8e-21 Score=185.05 Aligned_cols=183 Identities=17% Similarity=0.190 Sum_probs=119.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|++. ++..||+|+.++..... + ++..
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~valK~~~~~~~~~----------------------------------~------~~~~ 50 (262)
T cd05071 12 VKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP----------------------------------E------AFLQ 50 (262)
T ss_pred eecCCCCCCcEEEEEec-CCceEEEEecccCccCH----------------------------------H------HHHH
Confidence 57999999999999987 45679999987431100 0 1222
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++. ++. +.+...+ .....++||||++|++|.++..... ...+....+..++..++.++|+.|+
T Consensus 51 E~~~l~~l~-----~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 123 (262)
T cd05071 51 EAQVMKKLR-----HEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 123 (262)
T ss_pred HHHHHHhCC-----CCCcceEEEEE--CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 222222221 111 1111111 1245689999999999988754321 1222334455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.++.++|+|||.+..+.........+......+..|| ....+..+...|+||+|+.++++++
T Consensus 124 ~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE-----~~~~~~~~~~~DvwslG~~l~ellt 198 (262)
T cd05071 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-----AALYGRFTIKSDVWSFGILLTELTT 198 (262)
T ss_pred cccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHh-----HhccCCCCchhhHHHHHHHHHHHHc
Confidence 99999999999999999999999999876543211111111112233344 3334455778999999999999987
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=5e-21 Score=185.76 Aligned_cols=189 Identities=18% Similarity=0.255 Sum_probs=121.2
Q ss_pred cccccccccEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|++|+||+|+++.+|+ .||+|..+.+....... +
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~--------------------------------------~ 52 (268)
T cd05063 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQ--------------------------------------D 52 (268)
T ss_pred eEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHH--------------------------------------H
Confidence 789999999999999875554 79999987552211000 0
Q ss_pred HHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
+..|++.+.++ . ++++ .+... .......++||||++|++|.++........+. ...+..++..++.++|+.
T Consensus 53 ~~~e~~~l~~l----~-h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~ 126 (268)
T cd05063 53 FLSEASIMGQF----S-HHNIIRLEGV-VTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM 126 (268)
T ss_pred HHHHHHHHhcC----C-CCCeeEEEEE-EccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 12222221111 1 1221 22122 22335678999999999998875433222333 334456788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.++.++++|||++..+............ ....+..++++....+..+.+.|+||+|+.++++
T Consensus 127 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~---~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~el 203 (268)
T cd05063 127 NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSG---GKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEV 203 (268)
T ss_pred CeeccccchhhEEEcCCCcEEECCCccceecccccccceeccC---CCcCceecCHHHhhcCCcChHhHHHHHHHHHHHH
Confidence 9999999999999999999999999998876433221111100 0001122333444445557889999999999998
Q ss_pred HH
Q 011399 368 FD 369 (487)
Q Consensus 368 ~~ 369 (487)
++
T Consensus 204 l~ 205 (268)
T cd05063 204 MS 205 (268)
T ss_pred Hh
Confidence 76
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.8e-21 Score=183.99 Aligned_cols=185 Identities=17% Similarity=0.124 Sum_probs=120.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|..+ +++.||+|+........... +...+..+....|+++..+++.
T Consensus 12 ~~ig~g~~~~vy~~~~~-~~~~~~~k~~~~~~~~~~~~-------~~~e~~~l~~l~~~~i~~~~~~------------- 70 (261)
T cd05148 12 RKLGSGYFGEVWEGLWK-NRVRVAIKILKSDDLLKQQD-------FQKEVQALKRLRHKHLISLFAV------------- 70 (261)
T ss_pred hhhccCCCccEEEeEec-CCCcEEEEeccccchhhHHH-------HHHHHHHHhcCCCcchhheeee-------------
Confidence 67999999999999998 59999999987542211100 0000011111123333333221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
.......+++|||++|++|.++..... ...+. ...+..++..++.++|+.|++
T Consensus 71 ------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~ 126 (261)
T cd05148 71 ------------------------CSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSI 126 (261)
T ss_pred ------------------------EecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 122345689999999999988754321 12233 334556788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||+||+++.++.++|+|||.+..+....... .+ ....+..++++....+..+.+.|+||+|+.++++++
T Consensus 127 h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~-~~-----~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~ 199 (261)
T cd05148 127 HRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS-SD-----KKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199 (261)
T ss_pred ccccCcceEEEcCCceEEEccccchhhcCCccccc-cC-----CCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHc
Confidence 99999999999999999999999998764331110 00 001112233333344556778999999999999987
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-22 Score=182.93 Aligned_cols=252 Identities=18% Similarity=0.184 Sum_probs=146.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||.|+||.|++..++.+|+..|||.++...... -++++..|+|-..
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k--------------------------------eq~rll~e~d~~m 117 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK--------------------------------EQKRLLMEHDTVM 117 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH--------------------------------HHHHHHHHHHHHH
Confidence 56999999999999999999999999998553211 1122333333333
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH----HhcCCCHHHHHH---HHHHHHHHHHH-
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI----ESQGLKVLDLVN---TGIQCSLRQLL- 285 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~----~~~~~~~~~~~~---~~i~~~l~~lh- 285 (487)
.+.|+..+.+.|+.. + -.+..|+.||.|+- ++..+-.. .+..+++ .++. .....||.||-
T Consensus 118 ks~~cp~IVkfyGa~--------F--~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE-~Ilg~ItvatV~AL~yLK~ 185 (361)
T KOG1006|consen 118 KSSNCPNIVKFYGAL--------F--SEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPE-NILGHITVATVDALDYLKE 185 (361)
T ss_pred hhcCCcHHHHHhhhh--------h--cCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcH-hhhhheeeeehhHHHHHHH
Confidence 333322222222110 0 01556899999964 55443211 1112222 2222 22334888886
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
+..|+|||+||+|||++..|.+||+|||+++++-.+...+ -+|.- -+..||.+.+. .-|| +-.+|+||+|.+|
T Consensus 186 ~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCr---pYmAPERi~p~--~~gy-DiRSDvWSLGITL 259 (361)
T KOG1006|consen 186 ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCR---PYMAPERIDPS--DKGY-DIRSDVWSLGITL 259 (361)
T ss_pred HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCc---cccChhccCCc--cCCc-chhhhhhhhcceE
Confidence 4689999999999999999999999999999886552211 11111 12234443221 1133 4567899999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
+|+.++-+ |... +.++++++..+....+..+- ++.+- ...+.
T Consensus 260 ~EvAtG~f--Pyr~--w~svfeql~~Vv~gdpp~l~---------------------~~~~~-------------~~~s~ 301 (361)
T KOG1006|consen 260 YEVATGNF--PYRK--WDSVFEQLCQVVIGDPPILL---------------------FDKEC-------------VHYSF 301 (361)
T ss_pred eeeecCCC--Ccch--HHHHHHHHHHHHcCCCCeec---------------------Ccccc-------------cccCH
Confidence 88887543 3333 33466666665543332211 11110 02455
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
..+..+.-||.||.+.|..--.-..+|++
T Consensus 302 ~~~~fintCl~Kd~~~Rpky~~Lk~~~fy 330 (361)
T KOG1006|consen 302 SMVRFINTCLIKDRSDRPKYDDLKKFPFY 330 (361)
T ss_pred HHHHHHHHHhhcccccCcchhhhhcCchh
Confidence 56667777777777766665444455544
|
|
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.84 E-value=9e-21 Score=183.53 Aligned_cols=192 Identities=15% Similarity=0.053 Sum_probs=119.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|....+|+.||+|.+++....... ..+.+ .+
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------~~~~~------~~ 51 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAK------------------------------ARQDC------LK 51 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccchh------------------------------hHHHH------HH
Confidence 6799999999999999889999999988632110000 00111 11
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH---hcCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
|...+.++ +++.+.-+.-+.......+++|||++|++|.++.... ....+.. ..+..++..++.++|+.|
T Consensus 52 ei~~l~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 126 (267)
T cd08224 52 EIDLLKQL-----DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR 126 (267)
T ss_pred HHHHHHhC-----CCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 11111111 1111111111112234568999999999998764321 1112332 334566778999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|+||+||+++.+|.++|+|||++..+....... ........+..|+. ......+...|+||+|+.+++++
T Consensus 127 i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~y~apE~-----~~~~~~~~~~Di~slG~il~~l~ 200 (267)
T cd08224 127 IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA-HSLVGTPYYMSPER-----IHENGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred EecCCcChhhEEECCCCcEEEeccceeeeccCCCccc-ceecCCccccCHHH-----hccCCCCchhcHHHHHHHHHHHH
Confidence 9999999999999999999999999987664321110 00011122233443 22333467889999999999999
Q ss_pred HHhc
Q 011399 369 DDAL 372 (487)
Q Consensus 369 ~~~~ 372 (487)
++..
T Consensus 201 ~g~~ 204 (267)
T cd08224 201 ALQS 204 (267)
T ss_pred HCCC
Confidence 8543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=8e-20 Score=176.18 Aligned_cols=180 Identities=16% Similarity=0.185 Sum_probs=118.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.. .|+.||+|..+..... + ++..
T Consensus 12 ~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~-----------------------------------~------~~~~ 48 (256)
T cd05082 12 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATA-----------------------------------Q------AFLA 48 (256)
T ss_pred eeecccCCCeEEEEEE--cCCcEEEEEeCCCchH-----------------------------------H------HHHH
Confidence 6799999999999986 5889999988633110 0 0122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC-CCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG-LKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|+..+.++ .+..-+.+...+....+..+++|||++|++|.++....... .+. ...+..++..++.++|..|++
T Consensus 49 e~~~l~~l----~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 124 (256)
T cd05082 49 EASVMTQL----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFV 124 (256)
T ss_pred HHHHHHhC----CCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 22222222 11112222222233345678999999999998875432221 222 334456788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||+||+++++|.++|+|||++......... . ......++++....+..+...|+||+|+.++++++
T Consensus 125 H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~-~--------~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~ 194 (256)
T cd05082 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-G--------KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194 (256)
T ss_pred ccccchheEEEcCCCcEEecCCccceeccccCCC-C--------ccceeecCHHHHccCCCCchhhhHHHHHHHHHHHh
Confidence 9999999999999999999999998765432110 0 00112233334444556778999999999999986
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=6e-21 Score=183.50 Aligned_cols=186 Identities=19% Similarity=0.246 Sum_probs=122.0
Q ss_pred cccccccccEEEEEEEccCC----cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSG----QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g----~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||.|+||+||+|....++ ..||+|+.++..... .. ..
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~---~~-----------------------------~~----- 47 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ---QI-----------------------------EE----- 47 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH---HH-----------------------------HH-----
Confidence 67999999999999998655 899999987653221 00 01
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHHHHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~l 284 (487)
+..|...+.++ ++++ +.+++ ....+..+++|||++|++|.+...... ........+..++..++.++
T Consensus 48 -~~~e~~~l~~l-----~~~~--i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l 119 (258)
T smart00219 48 -FLREARIMRKL-----DHPN--IVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL 119 (258)
T ss_pred -HHHHHHHHHhc-----CCCc--hheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 11111111111 1121 11222 122356789999999999988754433 22333344456788899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
|+.|++|+|+||+||+++.++.++|+|||++......... .. ......+..++++....+..+.+.|+|++|+.+
T Consensus 120 h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~---~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~ 194 (258)
T smart00219 120 ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY--KK---KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLL 194 (258)
T ss_pred hcCCeeecccccceEEEccCCeEEEcccCCceeccccccc--cc---ccCCCcccccChHHhccCCCCcchhHHHHHHHH
Confidence 9999999999999999999999999999999876543110 00 000011222333333455668899999999999
Q ss_pred HHHHH
Q 011399 365 RNFFD 369 (487)
Q Consensus 365 ~~~~~ 369 (487)
++++.
T Consensus 195 ~~l~~ 199 (258)
T smart00219 195 WEIFT 199 (258)
T ss_pred HHHHh
Confidence 99986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-21 Score=189.11 Aligned_cols=187 Identities=16% Similarity=0.189 Sum_probs=118.6
Q ss_pred cccccccccEEEEEEEc----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLK----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||+||+|... .+++.||+|..+....... ..
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~--------------------------------~~------ 52 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ--------------------------------WG------ 52 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH--------------------------------HH------
Confidence 67999999999999863 3568999999864321110 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhc----------------CCCHH-
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQ----------------GLKVL- 270 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~----------------~~~~~- 270 (487)
++.+|...+.++. +++ +++++ .......+++|||+++++|.++...... ..+..
T Consensus 53 ~~~~E~~~l~~l~-----h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T cd05090 53 EFQQEASLMAELH-----HPN--IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGD 125 (283)
T ss_pred HHHHHHHHHhhCC-----CCC--eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHH
Confidence 1122222222221 222 22222 2234567899999999999887543211 12222
Q ss_pred -HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 011399 271 -DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349 (487)
Q Consensus 271 -~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (487)
..+..++..++.|+|+.|++|+|+||+||+++.++.++|+|||+++.+........... .......++++....+
T Consensus 126 ~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~ 201 (283)
T cd05090 126 FLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK----SLLPIRWMPPEAIMYG 201 (283)
T ss_pred HHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccC----CCccceecChHHhccC
Confidence 23456777899999999999999999999999999999999999987643211000000 0011112333333345
Q ss_pred CCCCCCCcchHHHHHHHHHH
Q 011399 350 FLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 350 ~~~~~~Di~sl~~~l~~~~~ 369 (487)
..+++.|+||+|+.++++++
T Consensus 202 ~~~~~~Dv~slG~il~el~~ 221 (283)
T cd05090 202 KFSSDSDIWSFGVVLWEIFS 221 (283)
T ss_pred CCCchhhhHHHHHHHHHHHc
Confidence 56888999999999999996
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.2e-22 Score=200.98 Aligned_cols=264 Identities=15% Similarity=0.104 Sum_probs=184.0
Q ss_pred CCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 121 g~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
+.+....|-.|+ +.||+|+|-+||+|.+..+|.+||--.++- +.+..+-+.+.++...+..+..+.|+||+.+++.
T Consensus 34 e~~p~gRy~k~~-evLGrGafKtVYka~De~~giEVAWnqvk~---~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~S 109 (632)
T KOG0584|consen 34 EKDPTGRYLKFD-EVLGRGAFKTVYKAFDEEEGIEVAWNQVKI---RDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDS 109 (632)
T ss_pred ccCCCCceeehh-hhcccccceeeeeccccccchhhHHHHHhH---HHhhcChHHHHHHHHHHHHHccCCCCceeeeeeh
Confidence 445566677776 579999999999999998999888543321 1112222233344444444445668888887775
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQC 279 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~ 279 (487)
+.+. ......+|+|.+.+|+|..+.... .......+-+.+||+.
T Consensus 110 W~d~-----------------------------------~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILk 154 (632)
T KOG0584|consen 110 WVDT-----------------------------------DNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILK 154 (632)
T ss_pred eecC-----------------------------------CCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 5432 012346899999999999885432 2334455667789999
Q ss_pred HHHHHHHCC--ccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 280 SLRQLLEYG--YFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 280 ~l~~lh~~g--ivH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
+|.|||++. |+|||||-.||||+ ..|.|||.|.|+|..+....... +-+.|+-||+++|.-+| ...+|
T Consensus 155 GL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks--------vIGTPEFMAPEmYEE~Y-nE~VD 225 (632)
T KOG0584|consen 155 GLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS--------VIGTPEFMAPEMYEENY-NELVD 225 (632)
T ss_pred HhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccce--------eccCccccChHHHhhhc-chhhh
Confidence 999999875 99999999999998 56999999999998776554332 34569999999998655 88999
Q ss_pred cchHHHHHHHHHHHhccCCCCcC-cHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSEL-NFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFA 435 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~ 435 (487)
++|||.+|.||.+.-+ |.++= +-.++...+ -.++.|.
T Consensus 226 VYaFGMCmLEMvT~eY--PYsEC~n~AQIYKKV-------~SGiKP~--------------------------------- 263 (632)
T KOG0584|consen 226 VYAFGMCMLEMVTSEY--PYSECTNPAQIYKKV-------TSGIKPA--------------------------------- 263 (632)
T ss_pred hhhhhHHHHHHHhccC--ChhhhCCHHHHHHHH-------HcCCCHH---------------------------------
Confidence 9999999999998432 32221 112222111 1222222
Q ss_pred HHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 436 KRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 436 ~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.+-+=.+|+.|..+.+||.. .+.|.+..+-+.|+||+.+
T Consensus 264 -sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 264 -ALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -HhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 11122478999999999998 8889999999999999875
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-20 Score=182.58 Aligned_cols=124 Identities=14% Similarity=0.062 Sum_probs=88.7
Q ss_pred CCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCC
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~ 319 (487)
...+++|||+++++|.++........+.. ..+..++..++.|+|+.|++|+|+||.||+++.++.++|+|||+++.+.
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 44579999999999988865433333433 3445778889999999999999999999999999999999999998764
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 320 EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+......... ..+....++++....+..+.+.|+||+|+.++++++
T Consensus 161 ~~~~~~~~~~----~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t 206 (279)
T cd05111 161 PDDKKYFYSE----HKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206 (279)
T ss_pred CCCcccccCC----CCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHc
Confidence 3321111100 011112233333344556888999999999999986
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-20 Score=181.02 Aligned_cols=191 Identities=18% Similarity=0.152 Sum_probs=120.6
Q ss_pred cccccccccEEEEEEE----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQL----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~----~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|.. ..++..||+|..++........ .
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~--------------------------------~----- 52 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--------------------------------D----- 52 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHH--------------------------------H-----
Confidence 6699999999999984 3468899999987553221100 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecC-CCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (487)
+.+|...+.++ .+..-+.+...+... ....++||||++|++|.++........+ ....+..++..++.++|+
T Consensus 53 -~~~e~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~ 127 (284)
T cd05079 53 -LKKEIEILRNL----YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS 127 (284)
T ss_pred -HHHHHHHHHhC----CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11222222211 111111222222221 2446899999999999887543322233 334445678889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|+|+||.||+++.+|.++|+|||++..+....... . ......+....++++...-+..+++.|+||+|+.+++
T Consensus 128 ~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~--~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~e 204 (284)
T cd05079 128 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY--T-VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYE 204 (284)
T ss_pred CCeeecccchheEEEcCCCCEEECCCccccccccCccce--e-ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhh
Confidence 999999999999999999999999999998764321100 0 0000111112233333334556788999999999999
Q ss_pred HHH
Q 011399 367 FFD 369 (487)
Q Consensus 367 ~~~ 369 (487)
+++
T Consensus 205 llt 207 (284)
T cd05079 205 LLT 207 (284)
T ss_pred hhc
Confidence 987
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-21 Score=184.36 Aligned_cols=188 Identities=19% Similarity=0.245 Sum_probs=119.6
Q ss_pred cccccccccEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|.++.+|+ .||||+.......... ..
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------------~~------ 51 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR--------------------------------RD------ 51 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHH--------------------------------HH------
Confidence 679999999999999876664 6999998654221100 00
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
|..|...+.++ +++++.-..-+.......++||||++|++|.++........+.. ..+..++..++.++|+.|
T Consensus 52 ~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g 126 (269)
T cd05065 52 FLSEASIMGQF-----DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN 126 (269)
T ss_pred HHHHHHHHHhC-----CCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 12222222211 11221111111223456789999999999988754433333443 334467788999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHH---HHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVV---HMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
++|+|+||.||+++.++.++|+|||++..+...... ....... ...+..|| ....+..+.+.|+||+|+.+
T Consensus 127 ~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE-----~~~~~~~~~~~DvwslG~~l 201 (269)
T cd05065 127 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPE-----AIAYRKFTSASDVWSYGIVM 201 (269)
T ss_pred EeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHh-----HhccCcccchhhhhhhHHHH
Confidence 999999999999999999999999998765432110 0111000 11223343 33344557789999999999
Q ss_pred HHHHH
Q 011399 365 RNFFD 369 (487)
Q Consensus 365 ~~~~~ 369 (487)
++++.
T Consensus 202 ~e~l~ 206 (269)
T cd05065 202 WEVMS 206 (269)
T ss_pred HHHhc
Confidence 99875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-20 Score=186.76 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=86.0
Q ss_pred CCceEEEeecCCCCcCcHHHHHhc---------------CCCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCC
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIESQ---------------GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE 304 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~ 304 (487)
...+++|||+++++|.++...... ..+. ...+..++..++.|+|++|++|+|+||+||+++.+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~ 173 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN 173 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence 556899999999999887543211 1111 23345678889999999999999999999999999
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 305 GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 305 g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|.++|+|||+++.+.......... .....+..++++....+..+.+.|+||+|+.++++++
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 234 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTT----NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234 (304)
T ss_pred CcEEECCCccceeccccccccccc----CCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHc
Confidence 999999999998765332110000 0000112233333333445778999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-21 Score=184.51 Aligned_cols=129 Identities=15% Similarity=0.094 Sum_probs=87.0
Q ss_pred CCCceEEEeecCCCCcCcHHHHHhcC------CCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCC
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIESQG------LKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~------~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGl 314 (487)
....++||||++|++|.++....... ......+..++..++.|+|+.|++|||+||.||+++.++.++|+|||+
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~ 146 (269)
T cd05042 67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGL 146 (269)
T ss_pred CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEecccc
Confidence 35678999999999998875432211 122334567788899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHH--HcCCCCCCCCcchHHHHHHHHHH
Q 011399 315 MSETPEEARFA-IIGHVVHMVNRDYEAMARDYY--ALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 315 a~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+.......... .........+..||.+..... .....+.+.|+||+|+.++++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 204 (269)
T cd05042 147 ALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFT 204 (269)
T ss_pred ccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHh
Confidence 87643321100 000001112334444321110 11234678999999999999987
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-20 Score=183.89 Aligned_cols=251 Identities=18% Similarity=0.179 Sum_probs=151.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.+..+|+.||||.++...... .....++.+..+.. ...|++++.+++.+.
T Consensus 21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~e~~~~~~---~~~~~~i~~~~~~~~----------- 84 (296)
T cd06618 21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE--ENKRILMDLDVVLK---SHDCPYIVKCYGYFI----------- 84 (296)
T ss_pred eEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH--HHHHHHHHHHHHHh---ccCCCchHhhheeee-----------
Confidence 78999999999999998779999999987432111 00111122111110 112555555554321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH-CCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE-YGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~-~giv 290 (487)
.....+++|||+.+ .+.++........+.. ..+..++..++.|+|. .|++
T Consensus 85 --------------------------~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~ 137 (296)
T cd06618 85 --------------------------TDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVI 137 (296)
T ss_pred --------------------------cCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEe
Confidence 12456899999865 5555433222233333 3456778889999997 6999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc----CCCCCCCCcchHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL----DFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~Di~sl~~~l~~ 366 (487)
|+|++|.||+++.++.++|+|||++..+....... .. .+.+..++++.+.. +-.+.+.|+||+|+.+++
T Consensus 138 H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~--~~-----~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~e 210 (296)
T cd06618 138 HRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT--RS-----AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVE 210 (296)
T ss_pred cCCCcHHHEEEcCCCCEEECccccchhccCCCccc--CC-----CCCccccCHhhcCCCCCccccccchhHHHHHHHHHH
Confidence 99999999999999999999999987764321110 00 01122233333322 224667899999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++.. ++..... ....+...... ..|.... ....++++
T Consensus 211 l~~g~~--p~~~~~~--~~~~~~~~~~~-------------------------~~~~~~~------------~~~~~~~l 249 (296)
T cd06618 211 LATGQF--PYKNCKT--EFEVLTKILQE-------------------------EPPSLPP------------NEGFSPDF 249 (296)
T ss_pred HHhCCC--CCCcchh--HHHHHHHHhcC-------------------------CCCCCCC------------CCCCCHHH
Confidence 997432 3322110 01111111100 0011000 00235677
Q ss_pred HHHHHHHHhhcCcccccccchhhcccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
++.+.+||..||..|.+..+.+.|+||..
T Consensus 250 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 250 CSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred HHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 88888999999999999888888888854
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-20 Score=184.45 Aligned_cols=200 Identities=17% Similarity=0.189 Sum_probs=125.2
Q ss_pred cccccccccEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|.+.. ++..||+|.......... +
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~--------------------------------------~ 53 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQD--------------------------------------E 53 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHH--------------------------------------H
Confidence 679999999999999975 678899998764322110 1
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhc------CCCHHH--HHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQ------GLKVLD--LVNTGIQ 278 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~------~~~~~~--~~~~~i~ 278 (487)
.++..|...+.++. ++++ .+++ .......+++|||++|++|.++...... ..+... .+..++.
T Consensus 54 ~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~ 126 (277)
T cd05036 54 SDFLMEALIMSKFN-----HQNI--VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVA 126 (277)
T ss_pred HHHHHHHHHHHhCC-----CCCE--eeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 11233332222221 1222 1222 2223557899999999999887543321 133333 3456788
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcCCC---cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATPEG---KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV 355 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~~g---~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (487)
.++.|+|+.|++|+|+||+||+++.+| .++|+|||++..+.........+ ........++++....+..+.+.
T Consensus 127 ~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~ 202 (277)
T cd05036 127 KGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGG----RAMLPIKWMPPEAFLDGIFTSKT 202 (277)
T ss_pred HHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCC----CCCccHhhCCHHHHhcCCcCchh
Confidence 899999999999999999999998765 59999999998763321100000 00011223334444445568899
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCcHHH
Q 011399 356 DVTPIVPALRNFFDDALNSSVSELNFKT 383 (487)
Q Consensus 356 Di~sl~~~l~~~~~~~~~~~~~~~~~~~ 383 (487)
|+||+|+.++++++. ...|+...+...
T Consensus 203 DiwslG~il~el~~~-g~~pf~~~~~~~ 229 (277)
T cd05036 203 DVWSFGVLLWEIFSL-GYMPYPGRTNQE 229 (277)
T ss_pred HHHHHHHHHHHHHcC-CCCCCCCCCHHH
Confidence 999999999999852 123444444333
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.9e-21 Score=186.51 Aligned_cols=188 Identities=19% Similarity=0.228 Sum_probs=118.6
Q ss_pred cccccccccEEEEEEE----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQL----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~----~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|.. ..+|+.||||..+....... +.+....+.+....|+|++.+.+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~-------~~~~~e~~~l~~l~h~~iv~~~~---------- 72 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL-------RDFEREIEILKSLQHDNIVKYKG---------- 72 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH-------HHHHHHHHHHHhCCCCCeeEEEE----------
Confidence 6799999999999984 34689999999865432211 00000000011111232222211
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (487)
+.. ......++||||++|++|.++........+ ....+..++..++.|+|+
T Consensus 73 --------------------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~ 126 (284)
T cd05081 73 --------------------------VCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS 126 (284)
T ss_pred --------------------------EEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 111 112346899999999999887543222233 334455778889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHH--HHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHV--VHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
.|++|+|+||+||++++++.++|+|||++..+............ ....+..|| ....+..+.+.|+||+|+.+
T Consensus 127 ~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~~l 201 (284)
T cd05081 127 KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPE-----SLTESKFSVASDVWSFGVVL 201 (284)
T ss_pred CCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHH-----HhccCCcChHHHHHHHHHHH
Confidence 99999999999999999999999999999876433210000000 001122333 33334457789999999999
Q ss_pred HHHHH
Q 011399 365 RNFFD 369 (487)
Q Consensus 365 ~~~~~ 369 (487)
+++++
T Consensus 202 ~el~~ 206 (284)
T cd05081 202 YELFT 206 (284)
T ss_pred HHHhh
Confidence 99987
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-20 Score=179.47 Aligned_cols=189 Identities=15% Similarity=0.115 Sum_probs=119.3
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||.|++|+||+|.++ .+++.||||+.+......- .
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~--~------------------------------------ 53 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRE--R------------------------------------ 53 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHH--H------------------------------------
Confidence 67999999999999864 2457899998754311100 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---------CCCHHH--HHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------GLKVLD--LVNTGI 277 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------~~~~~~--~~~~~i 277 (487)
.++..|...+.++ +++++.-..-+....+..++||||++|++|.++...... ..+... .+..++
T Consensus 54 ~~~~~e~~~l~~l-----~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 128 (277)
T cd05062 54 IEFLNEASVMKEF-----NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEI 128 (277)
T ss_pred HHHHHHHHHHHhC-----CCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHH
Confidence 0122222222111 122221111122334567899999999999887543211 112222 344678
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
..++.|+|+.|++|+|+||.||++++++.++|+|||++..+.......... .....+..++++....+..++..|+
T Consensus 129 ~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di 204 (277)
T cd05062 129 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG----KGLLPVRWMSPESLKDGVFTTYSDV 204 (277)
T ss_pred HHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCC----CCccCHhhcChhHhhcCCcCchhHH
Confidence 889999999999999999999999999999999999987653321100000 0001123344444455667888999
Q ss_pred chHHHHHHHHHH
Q 011399 358 TPIVPALRNFFD 369 (487)
Q Consensus 358 ~sl~~~l~~~~~ 369 (487)
||+|+.++++++
T Consensus 205 ~slG~~l~el~~ 216 (277)
T cd05062 205 WSFGVVLWEIAT 216 (277)
T ss_pred HHHHHHHHHHHc
Confidence 999999999987
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-19 Score=176.19 Aligned_cols=186 Identities=18% Similarity=0.110 Sum_probs=118.7
Q ss_pred cccccccccEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|++..+|+ .||+|+.+.........
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~-------------------------------------- 54 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK-------------------------------------- 54 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHH--------------------------------------
Confidence 789999999999999876776 48999886432211100
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~ 286 (487)
++..|...+.++ +++++ +.++. ......+++|||+++++|.+........... ...+..++..++.|+|+
T Consensus 55 ~~~~e~~~l~~~-----~~~~i--~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~ 127 (279)
T cd05109 55 EILDEAYVMAGV-----GSPYV--CRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE 127 (279)
T ss_pred HHHHHHHHHHhc-----CCCCC--ceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 111222222211 12222 22211 1234567999999999998775432222333 33445778889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
.|++|+|+||+||+++.++.++|+|||+++.+....... ..+......+..|+. ...+-.+.++|+||+|+.++
T Consensus 128 ~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~-----~~~~~~~~~~Di~slG~~l~ 202 (279)
T cd05109 128 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES-----ILHRRFTHQSDVWSYGVTVW 202 (279)
T ss_pred CCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHH-----hccCCCCchhHHHHHHHHHH
Confidence 999999999999999999999999999998765321110 000001112233443 33344577899999999999
Q ss_pred HHHH
Q 011399 366 NFFD 369 (487)
Q Consensus 366 ~~~~ 369 (487)
++++
T Consensus 203 el~t 206 (279)
T cd05109 203 ELMT 206 (279)
T ss_pred HHHc
Confidence 9886
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-20 Score=180.75 Aligned_cols=187 Identities=17% Similarity=0.128 Sum_probs=119.1
Q ss_pred ccccccccEEEEEEEccCC---cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 135 PIAAASLGQVYKAQLKYSG---QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~~g---~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
.||+|+||.||+|....++ ..||+|..+....... .+. +
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~--------------------------------~~~------~ 43 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAG--------------------------------KKE------F 43 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHH--------------------------------HHH------H
Confidence 5899999999999875444 7999999875422100 001 1
Q ss_pred HHHHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 212 VQEGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
..|...+.++ ++++ +.+...+ .....+++|||++|++|.++..... ........+..++..++.++|..|+
T Consensus 44 ~~e~~~l~~l-----~h~~iv~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i 116 (257)
T cd05060 44 LREASVMAQL-----DHPCIVRLIGVC--KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF 116 (257)
T ss_pred HHHHHHHHhc-----CCCCeeeEEEEE--cCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 2222222221 1122 1221111 2345789999999999988754322 2223334455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||.||+++.++.++|+|||++..+....... ...... ......++++....+..+.+.|+||+|+.++++++
T Consensus 117 ~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~-~~~~~~--~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~ 193 (257)
T cd05060 117 VHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY-RATTAG--RWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193 (257)
T ss_pred eccCcccceEEEcCCCcEEeccccccceeecCCccc-ccccCc--cccccccCHHHhcCCCCCccchHHHHHHHHHHHHc
Confidence 999999999999999999999999998764432110 000000 00011233334445556788999999999999986
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.4e-20 Score=177.70 Aligned_cols=248 Identities=14% Similarity=0.105 Sum_probs=153.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHH--HHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIG--LDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~--~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|++|.||+++...++..+++|+.+........ ......+. ...+....|+|+..+.+.+...
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e----~~~l~~l~h~~i~~~~~~~~~~------- 74 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQE----AQLLSKLDHPAIVKFHASFLER------- 74 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHH----HHHHHhCCCCcHHHHHHHHhcC-------
Confidence 6799999999999999867777888876542211110 00111111 1112233478888777654321
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH---hcCCCH--HHHHHHHHHHHHHHHHH
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKV--LDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~--~~~~~~~i~~~l~~lh~ 286 (487)
+..++||||++|++|.+..... ....+. ...+..++..++.++|+
T Consensus 75 ------------------------------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 124 (260)
T cd08222 75 ------------------------------DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ 124 (260)
T ss_pred ------------------------------CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 4457999999999998765421 112333 33445678889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|+|++|.||+++ ++.++|+|||++..+...... . ....+.+..++++.......+.+.|+||+|+.+++
T Consensus 125 ~~i~h~~l~~~nili~-~~~~~l~d~g~~~~~~~~~~~--~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~ 197 (260)
T cd08222 125 RRILHRDLKAKNIFLK-NNLLKIGDFGVSRLLMGSCDL--A----TTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYE 197 (260)
T ss_pred cCccccCCChhheEee-cCCEeecccCceeecCCCccc--c----cCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHH
Confidence 9999999999999996 467999999998765332110 0 00111222233333333334667999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++... .++...+....... .. ....|.+ ....+++.
T Consensus 198 l~~~~--~~~~~~~~~~~~~~---~~-------------------------~~~~~~~--------------~~~~~~~~ 233 (260)
T cd08222 198 MCCLA--HAFEGQNFLSVVLR---IV-------------------------EGPTPSL--------------PETYSRQL 233 (260)
T ss_pred HHhCC--CCCCCccHHHHHHH---HH-------------------------cCCCCCC--------------cchhcHHH
Confidence 88743 23332221111100 00 0011111 01234677
Q ss_pred HHHHHHHHhhcCcccccccchhhcccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
++.+.+||..||..|.+..+.+.|+||
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 234 NSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 889999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.9e-21 Score=194.63 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
+..++..++.|+|..|++|+|+||.|||++.++.++|+|||+++.+...... ...... ..+..++++....+..
T Consensus 244 ~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~-----~~~~y~aPE~~~~~~~ 318 (401)
T cd05107 244 FSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTF-----LPLKWMAPESIFNNLY 318 (401)
T ss_pred HHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcC-----CCCceeChHHhcCCCC
Confidence 3457788999999999999999999999999999999999999865322110 000011 1122233333344556
Q ss_pred CCCCCcchHHHHHHHHHH
Q 011399 352 SPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~ 369 (487)
+++.|+||+|+.++++++
T Consensus 319 ~~~~DvwslGvil~e~l~ 336 (401)
T cd05107 319 TTLSDVWSFGILLWEIFT 336 (401)
T ss_pred CcHhHHHHHHHHHHHHHH
Confidence 788999999999999886
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=177.85 Aligned_cols=189 Identities=15% Similarity=0.126 Sum_probs=118.9
Q ss_pred cccccccccEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|..+. .+..||+|......... ..
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~ 53 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR--------------------------------------ER 53 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH--------------------------------------HH
Confidence 679999999999997652 35689999875331110 00
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc--------C-CC--HHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--------G-LK--VLDLVNTGI 277 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--------~-~~--~~~~~~~~i 277 (487)
.++..|...+.++. ++++....-+.......++||||++|++|.++...... . .. ....+..++
T Consensus 54 ~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 128 (288)
T cd05061 54 IEFLNEASVMKGFT-----CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128 (288)
T ss_pred HHHHHHHHHHHhCC-----CCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHH
Confidence 01222222222221 22222111122334567999999999999988543211 0 11 223355678
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
..++.|+|++|++|+|+||.||+++.++.++|+|||+++.+.........+. .......++++....+..+.+.|+
T Consensus 129 ~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~----~~~~~~y~~pE~~~~~~~~~~~Dv 204 (288)
T cd05061 129 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK----GLLPVRWMAPESLKDGVFTTSSDM 204 (288)
T ss_pred HHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCC----CcccccccCHHHhccCCCChHhHH
Confidence 8899999999999999999999999999999999999886543211000000 000112233333344566888999
Q ss_pred chHHHHHHHHHH
Q 011399 358 TPIVPALRNFFD 369 (487)
Q Consensus 358 ~sl~~~l~~~~~ 369 (487)
||+|+.++++++
T Consensus 205 wslG~~l~el~~ 216 (288)
T cd05061 205 WSFGVVLWEITS 216 (288)
T ss_pred HHHHHHHHHHHh
Confidence 999999999986
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.4e-20 Score=172.73 Aligned_cols=177 Identities=18% Similarity=0.220 Sum_probs=118.3
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|..+ +.+|.|+||.||.+.. ++..+|||+.+|..... .. +......
T Consensus 33 y~~~--~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~--------------------------~~----~~~~f~~ 78 (232)
T PRK10359 33 IKTI--KVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRT--------------------------ER----FLKSFVK 78 (232)
T ss_pred eEEE--EEecCCCceEEEEEec--CCCcEEEEEechhcCch--------------------------HH----HHHhhhh
Confidence 4444 8899999999999765 57789999998763321 00 0011111
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceee---e-----cCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIF---W-----DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQC 279 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~---~-----~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~ 279 (487)
.--+.+|++++.++.+. .+..|..+ . .+++..+|||||++|.+|.++.. .+. -...++..
T Consensus 79 g~~~e~Ea~~l~rL~~~-----GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~--~~~~~i~~ 146 (232)
T PRK10359 79 GDYYENLIVQTDRVRSE-----GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE--DVKAKIKA 146 (232)
T ss_pred hHHHHHHHHHHHHHHHC-----CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH--HHHHHHHH
Confidence 11256778888888543 34444443 1 13567899999999999877622 122 23457778
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
++.++|+.|++||||||+||+++++| ++|+|||.++...++....+ .+. .-.+ .-+.|+|+
T Consensus 147 ~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d~-----~vl------------er~y-~~~~di~~ 207 (232)
T PRK10359 147 SIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKDR-----IDL------------ERHY-GIKNEIKD 207 (232)
T ss_pred HHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhhHHH-----HHH------------HhHh-cccccccc
Confidence 99999999999999999999999999 99999999987754432211 011 0111 23689999
Q ss_pred HHHHHHHHHH
Q 011399 360 IVPALRNFFD 369 (487)
Q Consensus 360 l~~~l~~~~~ 369 (487)
+|..+.-+..
T Consensus 208 lg~~~~~~~~ 217 (232)
T PRK10359 208 LGYYLLIYKK 217 (232)
T ss_pred eeEeehHHHH
Confidence 9877654443
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.4e-21 Score=185.56 Aligned_cols=283 Identities=14% Similarity=0.102 Sum_probs=167.0
Q ss_pred cccccccccEEEEEEEcc---CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKY---SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~---~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
++||+|+|+.||+|++.. .++.||+|-+.+.. || ..+..|+.
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-------------------------~p----------~ri~~El~ 86 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-------------------------SP----------SRILNELE 86 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeeccccc-------------------------Cc----------hHHHHHHH
Confidence 789999999999999876 67899999887542 11 11333444
Q ss_pred HHHHHH---HHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQ---NARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~---~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
++.++. |...+...+... +..++||||++.....++ ....+....+.+.+.+..+|.++|..
T Consensus 87 ~L~~~gG~~ni~~~~~~~rnn-------------d~v~ivlp~~~H~~f~~l--~~~l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 87 MLYRLGGSDNIIKLNGCFRNN-------------DQVAIVLPYFEHDRFRDL--YRSLSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred HHHHhccchhhhcchhhhccC-------------CeeEEEecccCccCHHHH--HhcCCHHHHHHHHHHHHHHhhhhhcc
Confidence 444443 222222333322 455799999999887776 45566777788888899999999999
Q ss_pred CccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHH------------------HHH-----HHh--------
Q 011399 288 GYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGH------------------VVH-----MVN-------- 335 (487)
Q Consensus 288 givH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~------------------~~~-----~~~-------- 335 (487)
||+|||+||+|+|.+ ..++-.|+|||++...+...+..-+.. +.+ ...
T Consensus 152 GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~ 231 (418)
T KOG1167|consen 152 GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRP 231 (418)
T ss_pred CccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCcc
Confidence 999999999999998 457899999999985322211111110 000 000
Q ss_pred -------cCHH-HHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHH---HHHHH-----HhhCCC--
Q 011399 336 -------RDYE-AMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVD---GLGAV-----LYQYPF-- 397 (487)
Q Consensus 336 -------~~~~-~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~---~l~~~-----~~~~~~-- 397 (487)
+.+. ...+.+...+--++.+|+||.|+.+..+++..++.-....+...+.+ -+|.. ..-+.-
T Consensus 232 ~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~ 311 (418)
T KOG1167|consen 232 SERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRIL 311 (418)
T ss_pred ceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCcee
Confidence 0111 11233445555677899999999999888765543333333333222 11111 000000
Q ss_pred -CCChH---HHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh-ccCCCHHHHHHHHHHHhhcCcccccccchhhccc
Q 011399 398 -NVPAY---YALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL-LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINL 472 (487)
Q Consensus 398 -~~p~~---~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l-~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~ 472 (487)
.-+.+ ..-+...+..+. +..+.+... |-....- ..-.++.+-+++.++|..||.+|.++.+++.|+|
T Consensus 312 l~~ksn~~~~~e~~~~f~s~~--~~~~~~~~q------~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpF 383 (418)
T KOG1167|consen 312 LWQKSNIPTIPELRVNFETLH--IESIYKSRQ------PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPF 383 (418)
T ss_pred eeccccccccHHHHhchhccC--hhhcccccc------cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcC
Confidence 00000 011111111110 111111000 0000111 1224558889999999999999999999999999
Q ss_pred cc
Q 011399 473 VD 474 (487)
Q Consensus 473 ~~ 474 (487)
|+
T Consensus 384 F~ 385 (418)
T KOG1167|consen 384 FD 385 (418)
T ss_pred Cc
Confidence 97
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=182.27 Aligned_cols=127 Identities=13% Similarity=0.172 Sum_probs=87.3
Q ss_pred CCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCC
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~ 319 (487)
+..+++|||+.+++|.++............ .+..++..++.|+|+.|++|+|+||+||++++++.++|+|||++..+.
T Consensus 70 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~ 149 (262)
T cd05058 70 GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIY 149 (262)
T ss_pred CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCcccccccc
Confidence 456899999999999887543222223332 334578889999999999999999999999999999999999998654
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 320 EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
.......... ......+..++++.+..+..+.+.|+||+|+.+++++++
T Consensus 150 ~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 198 (262)
T cd05058 150 DKEYYSVHNH--TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 198 (262)
T ss_pred CCcceeeccc--ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcC
Confidence 3211000000 000111223334444444457789999999999999873
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-20 Score=182.93 Aligned_cols=187 Identities=16% Similarity=0.153 Sum_probs=118.9
Q ss_pred cccccccccEEEEEEEccC-----CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYS-----GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~-----g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|..+.. +..||+|....+......
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~-------------------------------------- 53 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRER-------------------------------------- 53 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHH--------------------------------------
Confidence 6799999999999998633 479999997644211100
Q ss_pred hcHHHHHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC---------CCH--HHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG---------LKV--LDLVNTG 276 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~---------~~~--~~~~~~~ 276 (487)
..+..|...+..+ . ++. +.+... .......+++|||+++++|.++....... .+. ...+..+
T Consensus 54 ~~~~~e~~~l~~~----~-~~~i~~~~~~-~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (277)
T cd05032 54 IEFLNEASVMKEF----N-CHHVVRLLGV-VSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAE 127 (277)
T ss_pred HHHHHHHHHHHhC----C-CCceeEEEEE-EcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHH
Confidence 0112222222111 1 111 111111 12236679999999999998875432111 122 2334567
Q ss_pred HHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 011399 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPDV 355 (487)
Q Consensus 277 i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (487)
+..++.|+|+.|++|+|+||+||+++.+|.++|+|||+++.+.........+ ...+..+..|| ....+..+++.
T Consensus 128 i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~ 202 (277)
T cd05032 128 IADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE-----SLKDGVFTTKS 202 (277)
T ss_pred HHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHH-----HHhcCCCCccc
Confidence 8889999999999999999999999999999999999987654321100000 00011223343 33456678889
Q ss_pred CcchHHHHHHHHHH
Q 011399 356 DVTPIVPALRNFFD 369 (487)
Q Consensus 356 Di~sl~~~l~~~~~ 369 (487)
|+||+|+.++++++
T Consensus 203 Di~slG~il~el~t 216 (277)
T cd05032 203 DVWSFGVVLWEMAT 216 (277)
T ss_pred chHHHHHHHHHhhc
Confidence 99999999999986
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-20 Score=180.67 Aligned_cols=194 Identities=15% Similarity=0.087 Sum_probs=120.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|+++.+|+.||+|.......... ..... . .+.+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~--~~~~~--------------------------~------~~~~ 53 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQE--TSKEV--------------------------N------ALEC 53 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccch--hhHHH--------------------------H------HHHH
Confidence 679999999999999988999999998753211100 00000 0 1222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC-CCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++. +..-+.+...+.+. ....+++|||++|++|.+...... ........+..++..++.++|+.|++|
T Consensus 54 ei~~l~~l~----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H 129 (264)
T cd06653 54 EIQLLKNLR----HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVH 129 (264)
T ss_pred HHHHHHHcC----CCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 222222221 11111122222221 234679999999999987643221 122233445578888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+||+||+++.++.++|+|||++..+..... ...........+..|+ .......+.+.|+||+|+.++++++
T Consensus 130 ~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~il~~l~~ 204 (264)
T cd06653 130 RDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPE-----VISGEGYGRKADVWSVACTVVEMLT 204 (264)
T ss_pred CCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHh-----hhcCCCCCccccHHHHHHHHHHHHh
Confidence 99999999999999999999999987642110 0001111112233343 3333345778999999999999997
Q ss_pred H
Q 011399 370 D 370 (487)
Q Consensus 370 ~ 370 (487)
+
T Consensus 205 g 205 (264)
T cd06653 205 E 205 (264)
T ss_pred C
Confidence 4
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-20 Score=184.06 Aligned_cols=190 Identities=19% Similarity=0.197 Sum_probs=120.0
Q ss_pred cccccccccEEEEEEEcc----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKY----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|++.. +++.||||+.++...... ...+...++.+....|++++.+.+
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~------~~~~~~ei~~l~~l~~~~i~~~~~---------- 73 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQH------RSDFEREIEILRTLDHENIVKYKG---------- 73 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHH------HHHHHHHHHHHHhCCCCChheEEe----------
Confidence 679999999999999643 478999999875532200 000000000001111333222211
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecC--CCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLL 285 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh 285 (487)
+... ....+++|||++|++|.++........+. ...+..++..++.++|
T Consensus 74 ---------------------------~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH 126 (284)
T cd05038 74 ---------------------------VCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG 126 (284)
T ss_pred ---------------------------eeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH
Confidence 1111 23568999999999998875443322333 3445577888999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH--HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG--HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+.|++|+|+||.||+++.++.++|+|||++..+.......... ......+..|+ ....+..+.+.|+||+|+.
T Consensus 127 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe-----~~~~~~~~~~~Di~slG~~ 201 (284)
T cd05038 127 SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPE-----CLRTSKFSSASDVWSFGVT 201 (284)
T ss_pred hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcH-----HHccCCCCcccchHHHhhh
Confidence 9999999999999999999999999999998876321110000 00001122333 2233445778999999999
Q ss_pred HHHHHHHh
Q 011399 364 LRNFFDDA 371 (487)
Q Consensus 364 l~~~~~~~ 371 (487)
+++++++.
T Consensus 202 l~el~tg~ 209 (284)
T cd05038 202 LYELFTYG 209 (284)
T ss_pred hheeeccC
Confidence 99998744
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6e-20 Score=181.27 Aligned_cols=133 Identities=11% Similarity=0.107 Sum_probs=86.0
Q ss_pred ceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH
Q 011399 244 KVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 322 (487)
Q Consensus 244 ~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~ 322 (487)
.+++||++.+ ++.+..... ..+......+..++..++.|+|+.|++||||||+|||+++++.++|+|||+++.+....
T Consensus 102 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~ 180 (294)
T PHA02882 102 RFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHG 180 (294)
T ss_pred EEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCC
Confidence 3677887644 333332211 12222333456778889999999999999999999999999999999999998764221
Q ss_pred HH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcC
Q 011399 323 RF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSEL 379 (487)
Q Consensus 323 ~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~ 379 (487)
.. ...........+.+..++++.......+.++|+||+|+.+++++++ ..|+...
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g--~~P~~~~ 236 (294)
T PHA02882 181 KHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGI--KLPWKGF 236 (294)
T ss_pred cccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhC--CCCCCcc
Confidence 10 0000000111233444455555555568889999999999999985 3455444
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-20 Score=184.22 Aligned_cols=125 Identities=16% Similarity=0.179 Sum_probs=88.8
Q ss_pred CCCceEEEeecCCCCcCcHHHHHhc------------CCCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCc
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIESQ------------GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGK 306 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~------------~~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~ 306 (487)
....+++|||++|++|.++...... ..+. ...+..++..++.++|..|++|||+||.||++++++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 4667899999999999877542211 1233 3345577888999999999999999999999999999
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 307 LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 307 i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
++|+|||++..+.........+ .....+..++++....+..+++.|+||+|+.++++++
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t 217 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGG----HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 217 (288)
T ss_pred EEeccCCccccccCCceeecCC----CCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 9999999998664321100000 0001122344444444556788999999999999987
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-20 Score=185.20 Aligned_cols=189 Identities=18% Similarity=0.190 Sum_probs=119.6
Q ss_pred cccccccccEEEEEEEccC-----CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYS-----GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~-----g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|++|.||+|..+.. +..||+|..+...... +. .
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~---~~-----------------------------~----- 60 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK---DL-----------------------------S----- 60 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH---HH-----------------------------H-----
Confidence 6899999999999998633 3789999987542211 00 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHh---------------cCCCH--H
Q 011399 209 LNYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLKV--L 270 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~--~ 270 (487)
++..|...+.++ .+++++ .+.. +.......+++|||++|++|.++..... ...+. .
T Consensus 61 -~~~~E~~~l~~l----~~h~~i~~~~~-~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~ 134 (293)
T cd05053 61 -DLVSEMEMMKMI----GKHKNIINLLG-VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDL 134 (293)
T ss_pred -HHHHHHHHHHhh----cCCCCeeeEEE-EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHH
Confidence 012222222221 112222 2222 2233456789999999999988754211 11222 2
Q ss_pred HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 011399 271 DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF 350 (487)
Q Consensus 271 ~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (487)
..+..++..++.|+|+.|++|+|+||.||+++.++.++|+|||++..+........... ....+..++++.+..+.
T Consensus 135 ~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~ 210 (293)
T cd05053 135 VSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTN----GRLPVKWMAPEALFDRV 210 (293)
T ss_pred HHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCC----CCCCccccCHHHhccCC
Confidence 23456788899999999999999999999999999999999999987653221100000 00011123333334455
Q ss_pred CCCCCCcchHHHHHHHHHH
Q 011399 351 LSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 351 ~~~~~Di~sl~~~l~~~~~ 369 (487)
.+.++|+||+|+.++++++
T Consensus 211 ~~~~~Di~slG~il~el~~ 229 (293)
T cd05053 211 YTHQSDVWSFGVLLWEIFT 229 (293)
T ss_pred cCcccceeehhhHHHHHhc
Confidence 6788999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-20 Score=180.04 Aligned_cols=188 Identities=21% Similarity=0.199 Sum_probs=120.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|++|.||+|.+.. |+.||+|+.+...... .... +..
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~--------------------------------~~~~------~~~ 41 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPD--------------------------------LKRK------FLQ 41 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHH--------------------------------HHHH------HHH
Confidence 369999999999999984 9999999876432110 0011 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ +++.+.-...+....+..++||||++|++|.++........+... .+..++..++.++|+.|++|
T Consensus 42 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h 116 (251)
T cd05041 42 EAEILKQY-----DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIH 116 (251)
T ss_pred HHHHHHhC-----CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeh
Confidence 22222221 233332222233344667999999999999887543333334333 33456777999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|++|.||+++.++.++|+|||++............+. .......++++....+..+.+.|+||+|+.++++++
T Consensus 117 ~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~----~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t 190 (251)
T cd05041 117 RDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL----KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFS 190 (251)
T ss_pred hhcCcceEEEcCCCcEEEeeccccccccCCcceecccc----CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHh
Confidence 99999999999999999999999886542210000000 000111223333344556788999999999999997
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-20 Score=182.85 Aligned_cols=190 Identities=18% Similarity=0.241 Sum_probs=119.8
Q ss_pred cccccccccEEEEEEEccCC---cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSG---QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g---~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|+++.+| ..||+|..++....... . +
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~--------------------------------~------~ 51 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR--------------------------------R------D 51 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHH--------------------------------H------H
Confidence 67999999999999986444 37999998754321100 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
+..|...+.++ .+..-+.+...+ ......+++|||++|++|.++........+.. ..+..++..++.++|+.|
T Consensus 52 ~~~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 126 (267)
T cd05066 52 FLSEASIMGQF----DHPNIIHLEGVV-TKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG 126 (267)
T ss_pred HHHHHHHHHhC----CCCCcceEEEEE-ecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11222222211 111112222222 23456789999999999988754432223333 334467888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|+||+||+++.++.++++|||++..+........... . .......++++....+..+.+.|+|++|+.+++++
T Consensus 127 i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~-~--~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell 203 (267)
T cd05066 127 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR-G--GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 203 (267)
T ss_pred EeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecC-C--CccceeecCHhHhccCccCchhhhHHHHHHHHHHh
Confidence 99999999999999999999999999987653211100000 0 00011123333334455678899999999999987
Q ss_pred H
Q 011399 369 D 369 (487)
Q Consensus 369 ~ 369 (487)
.
T Consensus 204 ~ 204 (267)
T cd05066 204 S 204 (267)
T ss_pred c
Confidence 5
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=180.14 Aligned_cols=125 Identities=14% Similarity=0.115 Sum_probs=88.1
Q ss_pred CCCceEEEeecCCCCcCcHHHHHh---------------cCCCHH--HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcC
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIES---------------QGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATP 303 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~ 303 (487)
....+++|||++|++|.++..... ...... ..+..++..++.|+|++|++|+|+||+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 355789999999999988754321 112222 234567888999999999999999999999999
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 304 EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 304 ~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|.++|+|||+++.+.......... .....+..++++....+..+.+.|+||+|+.++++++
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~ 231 (314)
T cd05099 170 DNVMKIADFGLARGVHDIDYYKKTS----NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231 (314)
T ss_pred CCcEEEccccccccccccccccccc----cCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHh
Confidence 9999999999998765322110000 0001112333444444556788999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-20 Score=182.48 Aligned_cols=118 Identities=17% Similarity=0.121 Sum_probs=81.8
Q ss_pred CCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCC-------cEEEEe
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG-------KLAFLD 311 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g-------~i~l~D 311 (487)
.+..++||||++|++|..+........+ ....+..++..++.|+|+.|++|||+||.||+++++| .++++|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 3567899999999999877543322333 3334557788899999999999999999999998654 389999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcchHHHHHHHHH
Q 011399 312 FGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA-LDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 312 FGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~Di~sl~~~l~~~~ 368 (487)
||++......... . +....++++... ....++++|+||+|+.+++++
T Consensus 168 ~g~~~~~~~~~~~--~--------~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~ 215 (274)
T cd05076 168 PGVSFTALSREER--V--------ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEIC 215 (274)
T ss_pred Ccccccccccccc--c--------cCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 9987654322110 1 111122333222 234577899999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-20 Score=180.10 Aligned_cols=119 Identities=15% Similarity=0.147 Sum_probs=85.0
Q ss_pred CCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCc--------EEEEe
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGK--------LAFLD 311 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~--------i~l~D 311 (487)
...++||||++|++|.++........+... .+..++..++.|+|+.|++|||+||.||+++.++. ++++|
T Consensus 72 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 72 DESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred CCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecc
Confidence 456899999999999887543332334333 34578888999999999999999999999987765 69999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcchHHHHHHHHHHH
Q 011399 312 FGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 312 FGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||.+....... ...+ +...++++.+.- +..+.+.|+||+|+.+++++++
T Consensus 152 ~g~~~~~~~~~--~~~~--------~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g 201 (258)
T cd05078 152 PGISITVLPKE--ILLE--------RIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSG 201 (258)
T ss_pred cccccccCCch--hccc--------cCCccCchhccCCCCCCchhhHHHHHHHHHHHHcC
Confidence 99987654321 1111 112233333322 3357789999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-20 Score=166.13 Aligned_cols=215 Identities=18% Similarity=0.221 Sum_probs=133.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|+|-+-++..+|+..|||.++..+.. ..++++.+|+|...
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~--------------------------------q~q~r~L~dldi~~ 99 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS--------------------------------QEQKRLLMDLDIIM 99 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcCh--------------------------------HHHHHHHHhhhhhc
Confidence 4599999999999999999999999998744322 12233445555432
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec--CCCCceEEEeecCCCCcCcHHH--HHhcC---CCHHHHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGVKLNEQVA--IESQG---LKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~~L~~~~~--~~~~~---~~~~~~~~~~i~~~l~~lh~ 286 (487)
. ..+.-++-..|.. .+...++.||.++- +|+.+.. +...+ ++..-.+...+..|+.+||+
T Consensus 100 r------------~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~ 166 (282)
T KOG0984|consen 100 R------------TVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS 166 (282)
T ss_pred c------------CCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH
Confidence 1 1111112222222 24667899999965 6655432 22222 22222333445569999996
Q ss_pred -CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 287 -YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 287 -~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
..++|||+||+||||+.+|++|+||||+++.+.++...++ +|.- -+..||.+..+.-..|| +-++|+||+|.++
T Consensus 167 kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCk---pYmaPEri~~e~n~~gY-~vksDvWSLGItm 242 (282)
T KOG0984|consen 167 KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCK---PYMAPERINPELNQKGY-SVKSDVWSLGITM 242 (282)
T ss_pred HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCC---ccCChhhcCcccCcccc-eeehhhhhhhhhh
Confidence 5899999999999999999999999999999876643221 1111 12234544444433344 6678999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCCh
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPA 401 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~ 401 (487)
.|+....++.+.....|. .+..+..+-+..+|.
T Consensus 243 iElA~lr~PY~~w~tpF~----qLkqvVeep~P~Lp~ 275 (282)
T KOG0984|consen 243 IEMAILRFPYESWGTPFQ----QLKQVVEEPSPQLPA 275 (282)
T ss_pred hhhhhccccccccCCHHH----HHHHHhcCCCCCCcc
Confidence 998875444333333333 344444444444443
|
|
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.5e-20 Score=180.17 Aligned_cols=200 Identities=15% Similarity=0.109 Sum_probs=123.4
Q ss_pred cccccccccEEEEEEEccC---CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYS---GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~---g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||.|++|.||+|.+..+ ...||||............ .+......+....|++++.+++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~------~~~~e~~~l~~~~h~~i~~~~~----------- 74 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVRE------KFLQEAYIMRQFDHPHIVKLIG----------- 74 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHH------HHHHHHHHHHhCCCCchhceeE-----------
Confidence 6799999999999997633 3579999876443111000 0000001111112333333222
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
++. ....+++|||+++++|.++........+.. ..+..++..++.++|+.|
T Consensus 75 -------------------------~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 127 (270)
T cd05056 75 -------------------------VIT--ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR 127 (270)
T ss_pred -------------------------EEc--CCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 111 245689999999999988754333233433 344567888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|+||+||+++.++.++|+|||++..+....... .. ........++++.......+.+.|+||+|+.+++++
T Consensus 128 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~--~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 202 (270)
T cd05056 128 FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK--AS---KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202 (270)
T ss_pred eeccccChheEEEecCCCeEEccCceeeeccccccee--cC---CCCccccccChhhhccCCCCchhhhHHHHHHHHHHH
Confidence 9999999999999999999999999988765431100 00 000111223333334445577899999999999988
Q ss_pred HHhccCCCCcCcHHH
Q 011399 369 DDALNSSVSELNFKT 383 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~ 383 (487)
.. ...++...+...
T Consensus 203 ~~-g~~pf~~~~~~~ 216 (270)
T cd05056 203 ML-GVKPFQGVKNND 216 (270)
T ss_pred Hc-CCCCCCCCCHHH
Confidence 51 123444444333
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=3e-20 Score=182.76 Aligned_cols=125 Identities=18% Similarity=0.133 Sum_probs=85.4
Q ss_pred CCCceEEEeecCCCCcCcHHHHHhc-----------------------CCCHH--HHHHHHHHHHHHHHHHCCccccCCC
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIESQ-----------------------GLKVL--DLVNTGIQCSLRQLLEYGYFHADPH 295 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~-----------------------~~~~~--~~~~~~i~~~l~~lh~~givH~Dlk 295 (487)
....+++|||+.|++|.++...... ..+.. ..+..++..++.++|+.|++|+|+|
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 4567899999999999876432110 11222 3445678889999999999999999
Q ss_pred CCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 296 PGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 296 p~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|.||++++++.++|+|||++..+.......-.. ........++++...-...+.+.|+||+|+.++++++
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~----~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t 224 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRS----KGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchhccc----CCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHh
Confidence 999999999999999999998653321100000 0001112223333333445778999999999999986
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.2e-20 Score=178.53 Aligned_cols=120 Identities=18% Similarity=0.107 Sum_probs=84.3
Q ss_pred CCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCc-------EEEEe
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGK-------LAFLD 311 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~-------i~l~D 311 (487)
....+++|||++|++|..+........+. ...+..++..++.|+|+.|++|||+||.|||++.+|. ++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 35578999999999987764432222333 3345678889999999999999999999999987664 89999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 312 FGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 312 FGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
||++..+.... ...+ ...+..||.+. ..+..+.++|+||+|+.+++++.
T Consensus 156 ~g~~~~~~~~~--~~~~---~~~y~aPE~~~----~~~~~~~~~DiwslG~~l~el~~ 204 (262)
T cd05077 156 PGIPITVLSRQ--ECVE---RIPWIAPECVE----DSKNLSIAADKWSFGTTLWEICY 204 (262)
T ss_pred CCCCccccCcc--cccc---cccccChhhhc----CCCCCCchhHHHHHHHHHHHHHh
Confidence 99987653221 0111 12233344321 12345778999999999999873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-20 Score=180.72 Aligned_cols=139 Identities=16% Similarity=0.118 Sum_probs=87.3
Q ss_pred CCceEEEeecCCCCcCcHHHHHhcC---CC--HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCC
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIESQG---LK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 316 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~---~~--~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~ 316 (487)
...++||||++|++|.++....... .+ ....+..++..|+.|+|+.|++|+|+||+|||++.++.++|+|||++.
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~ 147 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGP 147 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEeccccccc
Confidence 4568999999999998875432211 12 223445678889999999999999999999999999999999999986
Q ss_pred CCCHHHHHH-HHHHHHHHHhcCHHHHHHHHH--HcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcH
Q 011399 317 ETPEEARFA-IIGHVVHMVNRDYEAMARDYY--ALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNF 381 (487)
Q Consensus 317 ~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~ 381 (487)
......... ..+......+..||.+..... .....+.+.|+||+|+.++++++.. ..++...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~-~~p~~~~~~ 214 (268)
T cd05086 148 SRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENA-AQPYSHLSD 214 (268)
T ss_pred ccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCC-CCCCCCCCH
Confidence 532211100 000011112233433211000 0011256789999999999998632 224444443
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-20 Score=186.36 Aligned_cols=189 Identities=16% Similarity=0.160 Sum_probs=119.5
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||.|+||.||+|+.. .++..||||+.+........ +.
T Consensus 41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------~~---- 84 (302)
T cd05055 41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER--------------------------------EA---- 84 (302)
T ss_pred ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH--------------------------------HH----
Confidence 68999999999999852 34568999988754221100 01
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC-CCH--HHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG-LKV--LDLVNTGIQCSLRQL 284 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-~~~--~~~~~~~i~~~l~~l 284 (487)
+..|...+.++ .+++++ .+.. +.......+++|||+.|++|.++....... .+. ...+..++..++.|+
T Consensus 85 --~~~E~~~l~~l----~~h~~iv~~~~-~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~l 157 (302)
T cd05055 85 --LMSELKIMSHL----GNHENIVNLLG-ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL 157 (302)
T ss_pred --HHHHHHHHHhc----cCCCCcceEEE-EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11222222221 111211 1111 122345678999999999998875432211 333 334456788899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
|+.|++|+|+||+||+++.++.++++|||++..+.........+. ....+..++++....+..+.+.|+||+|+.+
T Consensus 158 H~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 233 (302)
T cd05055 158 ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGN----ARLPVKWMAPESIFNCVYTFESDVWSYGILL 233 (302)
T ss_pred HHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCC----CCcccccCCHhhhccCCCCcHhHHHHHHHHH
Confidence 999999999999999999999999999999987643211100000 0011222333333445567789999999999
Q ss_pred HHHHH
Q 011399 365 RNFFD 369 (487)
Q Consensus 365 ~~~~~ 369 (487)
+++++
T Consensus 234 ~el~t 238 (302)
T cd05055 234 WEIFS 238 (302)
T ss_pred HHHHh
Confidence 99986
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=173.15 Aligned_cols=190 Identities=23% Similarity=0.199 Sum_probs=127.2
Q ss_pred cccccccccEEEEEE-EccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQ-LKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~-~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
++||+|++|+||+|+ +..+|+.||||+.++........+. . ......+ .....++.+... ..+.
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--~---~~~~~~~-~~~~~~~~~~~~---------~~~~ 98 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--Y---VDGDFRF-KYRKINPRKLVR---------LWAE 98 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--h---cccchhh-ccCCCCHHHHHH---------HHHH
Confidence 689999999999999 5558999999999865422100000 0 0000000 000112222111 1245
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCC-c
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYG-Y 289 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~g-i 289 (487)
.|+.++.++.+. .+.+|+++.. +..+|||||++|.++..... ....... ...+..++..++.++|..| +
T Consensus 99 ~E~~~L~~L~~~-----~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~g~i 170 (237)
T smart00090 99 KEFRNLQRLYEA-----GVPVPKPIAW--RRNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDILEEMRKLYKEGEL 170 (237)
T ss_pred HHHHHHHHHHhc-----CCCCCeeeEe--cCceEEEEEecCCccccccc-ccCCcchHHHHHHHHHHHHHHHHHHhcCCE
Confidence 678888888642 4667887753 45699999999988866421 1122222 2345678889999999999 9
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (487)
+|+|+||+||+++ +++++|+|||.+........ .++..+|.+.+...+...|+.+..
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~~~~ 227 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVDELD 227 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCCcCC
Confidence 9999999999998 88999999999998766543 245778888888877778775443
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-20 Score=180.88 Aligned_cols=125 Identities=16% Similarity=0.115 Sum_probs=87.8
Q ss_pred CCCceEEEeecCCCCcCcHHHHHh------cCCCHH--HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCC-----cE
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIES------QGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG-----KL 307 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~------~~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g-----~i 307 (487)
....+++|||++|++|.+...... ...+.. ..+..++..++.|+|+.|++|+|+||+||+++.++ .+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence 355789999999999988754321 112222 23446788899999999999999999999999887 89
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 308 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 308 ~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+++|||++..+.........+ ........++++...-+..+++.|+||+|+.++++++
T Consensus 151 ~l~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt 208 (269)
T cd05044 151 KIGDFGLARDIYKSDYYRKEG----EGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT 208 (269)
T ss_pred EECCcccccccccccccccCc----ccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHH
Confidence 999999998664321110000 0001122333444455667889999999999999986
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-20 Score=178.79 Aligned_cols=178 Identities=18% Similarity=0.198 Sum_probs=116.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||++.. +|+.||+|..+...... . +..
T Consensus 12 ~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~-----------------------------------~------~~~ 48 (254)
T cd05083 12 EIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQ-----------------------------------A------FLE 48 (254)
T ss_pred eeeccCCCCceEeccc--CCCceEEEeecCcchHH-----------------------------------H------HHH
Confidence 6799999999999974 78999999986432110 0 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-CCCHH--HHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKVL--DLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~~--~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ .+..-+.+...+. ....+++|||++|++|.++...... ..+.. ..+..++..++.++|+.|++
T Consensus 49 e~~~l~~~----~~~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ 122 (254)
T cd05083 49 ETAVMTKL----HHKNLVRLLGVIL--HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLV 122 (254)
T ss_pred HHHHHHhC----CCCCcCeEEEEEc--CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 11111111 1111122222221 2446899999999999887543321 23333 33456788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||+||+++.+|.++|+|||++........ .......+..|+ ....+..+.+.|+||+|+.++++++
T Consensus 123 H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~y~~pe-----~~~~~~~~~~~Dv~slG~~l~el~~ 192 (254)
T cd05083 123 HRDLAARNILVSEDGVAKVSDFGLARVGSMGVD----NSKLPVKWTAPE-----ALKHKKFSSKSDVWSYGVLLWEVFS 192 (254)
T ss_pred ccccCcceEEEcCCCcEEECCCccceeccccCC----CCCCCceecCHH-----HhccCCcCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999876432211 000111223343 3334556778999999999999986
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-20 Score=184.85 Aligned_cols=188 Identities=17% Similarity=0.197 Sum_probs=119.3
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||.|++|.||+|... .++..|++|..........
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--------------------------------------- 51 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR--------------------------------------- 51 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHH---------------------------------------
Confidence 67999999999999853 2456799998764322110
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-----------------cCCCHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-----------------QGLKVLD 271 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-----------------~~~~~~~ 271 (487)
-.+.+|...+.++ .++.+.-..-+.......++||||++|++|.++..... .+.....
T Consensus 52 ~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (291)
T cd05094 52 KDFQREAELLTNL-----QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 126 (291)
T ss_pred HHHHHHHHHHhcC-----CCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHH
Confidence 0112222222221 11222111112233456799999999999988754321 1112233
Q ss_pred HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 272 ~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
.+..++..++.++|+.|++|+|+||.||+++.++.++|+|||++............+. ..+....++++....+..
T Consensus 127 ~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~ 202 (291)
T cd05094 127 HIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH----TMLPIRWMPPESIMYRKF 202 (291)
T ss_pred HHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCC----CCcceeecChHHhccCCC
Confidence 4557788899999999999999999999999999999999999876543211100100 001122233333334456
Q ss_pred CCCCCcchHHHHHHHHHH
Q 011399 352 SPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~ 369 (487)
+++.|+||+|+.++++++
T Consensus 203 ~~~~Di~slG~il~el~t 220 (291)
T cd05094 203 TTESDVWSFGVILWEIFT 220 (291)
T ss_pred CchhhHHHHHHHHHHHHh
Confidence 778999999999999987
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-20 Score=182.21 Aligned_cols=186 Identities=16% Similarity=0.193 Sum_probs=117.8
Q ss_pred cccccccccEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||.|+||.||+|+.+. +.+.|++|......... ....
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------~~~~---- 54 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDEN--------------------------------LQSE---- 54 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchH--------------------------------HHHH----
Confidence 679999999999999753 34689999875321110 0001
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHHhc--------CCCH--HHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQ--------GLKV--LDLVNTG 276 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~--------~~~~--~~~~~~~ 276 (487)
+..|++.+.++. +++ +++++. ......++||||++|++|.++...... .... ...+..+
T Consensus 55 --~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 125 (275)
T cd05046 55 --FRRELDMFRKLS-----HKN--VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQ 125 (275)
T ss_pred --HHHHHHHHHhcC-----Ccc--eeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHH
Confidence 222333222221 111 122222 223457899999999999887543320 2233 3345577
Q ss_pred HHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 277 i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
+..++.|+|+.|++|+|+||+||+++.++.+++.|||++...................+..|+.+ ..+..+++.|
T Consensus 126 l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~-----~~~~~~~~~D 200 (275)
T cd05046 126 IALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAV-----QEDDFSTKSD 200 (275)
T ss_pred HHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhh-----ccCCCCchhh
Confidence 88899999999999999999999999999999999999875432211111111111123334432 2334567899
Q ss_pred cchHHHHHHHHHH
Q 011399 357 VTPIVPALRNFFD 369 (487)
Q Consensus 357 i~sl~~~l~~~~~ 369 (487)
+||+|+.++++++
T Consensus 201 i~slG~~l~~l~~ 213 (275)
T cd05046 201 VWSFGVLMWEVFT 213 (275)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999986
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.2e-20 Score=180.22 Aligned_cols=197 Identities=17% Similarity=0.156 Sum_probs=121.6
Q ss_pred cccccccccEEEEEEEcc-CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKY-SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||+|++|.||+|.+.. +++.+|||..+.........+ ... +..... +.
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~------------------~~~-----~~~~~~------~~ 56 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDK------------------RER-----DKSIGD------IV 56 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeecccccccccc------------------ccc-----hHHHHH------HH
Confidence 579999999999999986 578999998864321110000 000 000000 11
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-H--hcCCCHH--HHHHHHHHHHHHHHHH-
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-E--SQGLKVL--DLVNTGIQCSLRQLLE- 286 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~--~~~~~~~--~~~~~~i~~~l~~lh~- 286 (487)
.|..-+. .. .+++++.-+.-+.......+++|||++|++|.+.... . ....+.. ..+..++..++.++|.
T Consensus 57 ~e~~~l~---~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 132 (269)
T cd08528 57 SEVTIIK---EQ-LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE 132 (269)
T ss_pred HHHHHHh---hc-CCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC
Confidence 1111111 11 1223322222222334667899999999999876432 1 1223333 3334578889999995
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|+|+||.||+++.++.++|+|||++........ .........+..|+.+ ..+..+.+.|+||+|+.+++
T Consensus 133 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~Pe~~-----~~~~~~~~~Dv~slG~ll~~ 205 (269)
T cd08528 133 KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK--LTSVVGTILYSCPEIV-----KNEPYGEKADVWAFGCILYQ 205 (269)
T ss_pred CceeecCCCHHHEEECCCCcEEEecccceeecccccc--cccccCcccCcChhhh-----cCCCCchHHHHHHHHHHHHH
Confidence 7899999999999999999999999999987654421 1111112233344433 34455788999999999999
Q ss_pred HHHH
Q 011399 367 FFDD 370 (487)
Q Consensus 367 ~~~~ 370 (487)
++++
T Consensus 206 l~~g 209 (269)
T cd08528 206 MCTL 209 (269)
T ss_pred HHhC
Confidence 9874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.2e-19 Score=171.85 Aligned_cols=203 Identities=16% Similarity=0.074 Sum_probs=128.0
Q ss_pred cccccccccEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|.++.+|+ .||+|+......... ..
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~--------------------------------------~~ 54 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKA--------------------------------------NK 54 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHH--------------------------------------HH
Confidence 679999999999999876665 689998764421100 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~ 287 (487)
.+.+|+..+.++ .+..-+.+..... +...+++|||++|++|.+.........+.. ..+..++..++.++|+.
T Consensus 55 ~~~~e~~~l~~l----~h~~i~~~~~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 128 (279)
T cd05057 55 EILDEAYVMASV----DHPHVVRLLGICL--SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK 128 (279)
T ss_pred HHHHHHHHHHhC----CCCCcceEEEEEe--cCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 122233333322 1111122222222 267789999999999988754433333333 34457788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.++.++|+|||++..+....... .. .........++++....+..+.+.|+||+|+.++++
T Consensus 129 ~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~-~~---~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el 204 (279)
T cd05057 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY-HA---EGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWEL 204 (279)
T ss_pred CEEecccCcceEEEcCCCeEEECCCcccccccCcccce-ec---CCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHH
Confidence 99999999999999999999999999998775332110 00 000001122333333445567889999999999999
Q ss_pred HHHhccCCCCcCcHHHHH
Q 011399 368 FDDALNSSVSELNFKTIV 385 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~ 385 (487)
++. ...++...+...+.
T Consensus 205 ~~~-g~~p~~~~~~~~~~ 221 (279)
T cd05057 205 MTF-GAKPYEGIPAVEIP 221 (279)
T ss_pred hcC-CCCCCCCCCHHHHH
Confidence 861 22345554444433
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-20 Score=183.04 Aligned_cols=188 Identities=15% Similarity=0.184 Sum_probs=117.3
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|... .++..||+|.......... .
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---------------------------------~----- 52 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---------------------------------Q----- 52 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHH---------------------------------H-----
Confidence 67999999999999743 2567899998764321110 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc--------------CCCH--HHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--------------GLKV--LDL 272 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--------------~~~~--~~~ 272 (487)
++..|.+.+.++ +++++.-..-+.......+++|||++|++|.++...... ..+. ...
T Consensus 53 -~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 126 (280)
T cd05092 53 -DFQREAELLTVL-----QHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLA 126 (280)
T ss_pred -HHHHHHHHHhcC-----CCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHH
Confidence 122222222221 112211111122234567899999999999887543211 1222 233
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+..++..++.|+|+.|++|+|+||+||++++++.++|+|||++..+.........+. ....+..++++....+..+
T Consensus 127 ~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~ 202 (280)
T cd05092 127 IASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR----TMLPIRWMPPESILYRKFT 202 (280)
T ss_pred HHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCC----ccccccccCHHHhccCCcC
Confidence 446788899999999999999999999999999999999999876532211100100 0001222333333344567
Q ss_pred CCCCcchHHHHHHHHHH
Q 011399 353 PDVDVTPIVPALRNFFD 369 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~ 369 (487)
.+.|+||+|+.++++++
T Consensus 203 ~~~Di~slG~il~el~~ 219 (280)
T cd05092 203 TESDIWSFGVVLWEIFT 219 (280)
T ss_pred chhhHHHHHHHHHHHHc
Confidence 88999999999999987
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.3e-20 Score=182.17 Aligned_cols=188 Identities=18% Similarity=0.188 Sum_probs=117.8
Q ss_pred cccccccccEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
..||.|+||.||+|.+.. ++..||+|+.+......... .
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~--------------------------------~---- 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA--------------------------------D---- 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHH--------------------------------H----
Confidence 679999999999999742 57899999987542211100 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---------------------CC
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------------GL 267 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------------~~ 267 (487)
+..|...+.++ +++++.-..-+.......+++|||++|++|.++...... ..
T Consensus 55 --~~~ei~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (288)
T cd05050 55 --FQREAALMAEF-----DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPL 127 (288)
T ss_pred --HHHHHHHHHhc-----CCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCcccccccccccccccccccccccc
Confidence 11122211111 111111111112223457899999999999887543211 11
Q ss_pred CH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHH
Q 011399 268 KV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARD 344 (487)
Q Consensus 268 ~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 344 (487)
+. ...+..++..++.++|..|++|+|+||.||+++.+|.++|+|||++..+...... ....... ....++++
T Consensus 128 ~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~-----~~~y~aPE 202 (288)
T cd05050 128 SCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAI-----PIRWMPPE 202 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCcc-----ChhhcCHH
Confidence 11 2345577788999999999999999999999999999999999998765322100 0000000 11233334
Q ss_pred HHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 345 YYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 345 ~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
....+..+.+.|+||+|+.++++++
T Consensus 203 ~~~~~~~~~~~Dv~slG~il~el~~ 227 (288)
T cd05050 203 SIFYNRYTTESDVWAYGVVLWEIFS 227 (288)
T ss_pred HHhcCCCCchhHHHHHHHHHHHHHh
Confidence 4444556788999999999999986
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.3e-21 Score=186.58 Aligned_cols=200 Identities=18% Similarity=0.201 Sum_probs=125.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||.|+|+.||+|.+....+.||||+-.-+ +.+..+- . +.+.+...+|-+...
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN--K~WrdEK-----------------K-------eNYhKHAcREyrIHK 522 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN--KNWRDEK-----------------K-------ENYHKHACREYRIHK 522 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhc--cchhhHh-----------------h-------hhHHHHHHHHHhhhh
Confidence 4599999999999999877899999986522 1110000 0 011111112212111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC---CCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHC--
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY---TSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEY-- 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~-- 287 (487)
| + .+-+|.+.|+.+ +...|-|+|||+|.+|+-+...+ ...+...+-+..+|..+|.||.+.
T Consensus 523 e----------L---DHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikp 589 (775)
T KOG1151|consen 523 E----------L---DHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKP 589 (775)
T ss_pred c----------c---CcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCC
Confidence 1 1 112233333322 35568999999999998775543 345667778888999999999875
Q ss_pred CccccCCCCCCeEEcC---CCcEEEEecCCCCCCCHHHHHHHHHH------HHHHHhcCHHHHHHHHHHcC----CCCCC
Q 011399 288 GYFHADPHPGNLLATP---EGKLAFLDFGMMSETPEEARFAIIGH------VVHMVNRDYEAMARDYYALD----FLSPD 354 (487)
Q Consensus 288 givH~Dlkp~Nili~~---~g~i~l~DFGla~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g----~~~~~ 354 (487)
-|+|-|+||+|||+.. .|.|||.|||+++.++.+......|+ ..+.|+-.|+- +-.| -++.+
T Consensus 590 PIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEc-----FvVgkePPKIsnK 664 (775)
T KOG1151|consen 590 PIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPEC-----FVVGKEPPKISNK 664 (775)
T ss_pred CeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcce-----eecCCCCCccccc
Confidence 5999999999999963 47899999999998876543322221 11223333332 2223 34667
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcC
Q 011399 355 VDVTPIVPALRNFFDDALNSSVSEL 379 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~~~~~~~~~~~ 379 (487)
+|+||+|+.++..+- ...|+...
T Consensus 665 VDVWSvGVIFyQClY--GrKPFGhn 687 (775)
T KOG1151|consen 665 VDVWSVGVIFYQCLY--GRKPFGHN 687 (775)
T ss_pred eeeEeeehhhhhhhc--cCCCCCCc
Confidence 899999999887663 33455443
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-21 Score=197.64 Aligned_cols=242 Identities=17% Similarity=0.234 Sum_probs=163.4
Q ss_pred hhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCC---cEEEEEEecCChHHHHHHHHHHH
Q 011399 100 LQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSG---QIVAVKVQRPGIEEAIGLDFYLI 176 (487)
Q Consensus 100 lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g---~~VAVKv~~p~~~~~~~~dl~~l 176 (487)
...-+.|+.+++--+.+ .|+-++++--+-.++ +.||+|.||.|++|+++..| ..||||.++.+..+.-+
T Consensus 603 ~k~YiDP~TYEDPnqAv-reFakEId~s~i~Ie-~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekqr------ 674 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAV-REFAKEIDPSCVKIE-KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQR------ 674 (996)
T ss_pred ceeecCCccccCccHHH-HHhhhhcChhheEEE-EEEecccccceecccccCCCCcceeEEEeeeccCccHHHH------
Confidence 33445566555433332 223333443344443 78999999999999998766 58999999877544322
Q ss_pred HHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCc
Q 011399 177 RGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKL 256 (487)
Q Consensus 177 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L 256 (487)
.||+.||.-|-+| .+.+-|+.-.|+. -+.+..|+.|||++|+|
T Consensus 675 --------------------------------rdFL~EAsIMGQF----dHPNIIrLEGVVT-ks~PvMIiTEyMENGsL 717 (996)
T KOG0196|consen 675 --------------------------------RDFLSEASIMGQF----DHPNIIRLEGVVT-KSKPVMIITEYMENGSL 717 (996)
T ss_pred --------------------------------hhhhhhhhhcccC----CCCcEEEEEEEEe-cCceeEEEhhhhhCCcH
Confidence 2455565544333 2222233333332 24667899999999999
Q ss_pred CcHHHHHhcCCCHHHHHH--HHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHH
Q 011399 257 NEQVAIESQGLKVLDLVN--TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMV 334 (487)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~--~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~ 334 (487)
+.+.+.+...+...+++. ++|.++++||-++|++||||-..||||+.+-.+|+.|||+++.+.++.-..+... .+-+
T Consensus 718 DsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~-GGKI 796 (996)
T KOG0196|consen 718 DSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTL-GGKI 796 (996)
T ss_pred HHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCcccccc-CCcc
Confidence 999776655566555554 7799999999999999999999999999999999999999998855431111111 1000
Q ss_pred hcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Q 011399 335 NRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGA 390 (487)
Q Consensus 335 ~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 390 (487)
...+.+++.+.....+...|+||+|..|+|.+. |.+.|.-+++.++++.++..
T Consensus 797 --PiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmS-yGERPYWdmSNQdVIkaIe~ 849 (996)
T KOG0196|consen 797 --PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-YGERPYWDMSNQDVIKAIEQ 849 (996)
T ss_pred --ceeecChhHhhhcccCchhhccccceEEEEecc-cCCCcccccchHHHHHHHHh
Confidence 011223333345556888999999999999886 56678888888888877654
|
|
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.4e-19 Score=176.03 Aligned_cols=190 Identities=17% Similarity=0.167 Sum_probs=118.5
Q ss_pred cccccccccEEEEEEEcc-------CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-------SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-------~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
+.||+|+||.||+|.... ++..||+|..++..... +. ..
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~-----------------------------~~-- 69 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---DL-----------------------------SD-- 69 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---HH-----------------------------HH--
Confidence 689999999999998642 23579999987642111 00 00
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---------------CCCH--
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------GLKV-- 269 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~-- 269 (487)
+..|...+.++ ..++++.-..-+.......++||||+++++|.++...... ..+.
T Consensus 70 ----~~~e~~~l~~l----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~ 141 (307)
T cd05098 70 ----LISEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKD 141 (307)
T ss_pred ----HHHHHHHHHHh----cCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHH
Confidence 11122111211 1122221111122234567899999999999887543211 1222
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 011399 270 LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349 (487)
Q Consensus 270 ~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (487)
...+..++..++.|+|+.|++|+|+||+||+++.++.++|+|||.+..+....... ..... ...+..++++....+
T Consensus 142 ~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~--~~~~~--~~~~~y~aPE~~~~~ 217 (307)
T cd05098 142 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK--KTTNG--RLPVKWMAPEALFDR 217 (307)
T ss_pred HHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhh--ccccC--CCccceeChHHhccC
Confidence 23345678889999999999999999999999999999999999988764321110 00000 001122333333344
Q ss_pred CCCCCCCcchHHHHHHHHHH
Q 011399 350 FLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 350 ~~~~~~Di~sl~~~l~~~~~ 369 (487)
..+...|+||+|+.++++++
T Consensus 218 ~~~~~~DvwslG~~l~el~~ 237 (307)
T cd05098 218 IYTHQSDVWSFGVLLWEIFT 237 (307)
T ss_pred CCCcHHHHHHHHHHHHHHHc
Confidence 56788999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.7e-20 Score=183.53 Aligned_cols=225 Identities=16% Similarity=0.184 Sum_probs=159.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..+|-|+||.|-++..+.....+|+|++++. +|+.- .-++.+..|-+.+.
T Consensus 426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~----------------------------hIVdt--kQqeHv~sEr~Im~ 475 (732)
T KOG0614|consen 426 ATLGVGGFGRVELVKVNSQKATFALKILKKK----------------------------HIVDT--KQQEHVFSERNIMM 475 (732)
T ss_pred hhcccCccceEEEEEecccchHHHHHHHhHh----------------------------hccch--hHHHHHHhHHHHHH
Confidence 4699999999999988744445888887632 01110 11233444445555
Q ss_pred HHH--HHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQ--NARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~--~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|.+ -+.++.+.|.+...|| +.||-|=||.+-.+.+.+ ....+..+++..++..|++|||++||+
T Consensus 476 ~~~s~fIvrLYrTfrd~kyvY-------------mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iI 542 (732)
T KOG0614|consen 476 ECRSDFIVRLYRTFRDSKYVY-------------MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGII 542 (732)
T ss_pred hcCchHHHHHHHHhccchhhh-------------hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCce
Confidence 544 4567777787776664 999999999997764322 233556788888899999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
.||+||+|++++.+|-+||.|||.++.+....+ .++||+ ||++++++.-----+..+|.|++|..++|+++
T Consensus 543 YRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGT--------pEYVAPEIILnKGHD~avDyWaLGIli~ELL~ 614 (732)
T KOG0614|consen 543 YRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGT--------PEYVAPEIILNKGHDRAVDYWALGILIYELLT 614 (732)
T ss_pred eccCChhheeeccCCceEEeehhhHHHhccCCceeeecCC--------cccccchhhhccCcchhhHHHHHHHHHHHHHc
Confidence 999999999999999999999999999865533 345554 77777665533333678999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHH--HhhCCCCCChHHHHHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAV--LYQYPFNVPAYYALILRSLT 411 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~p~~~~~l~r~l~ 411 (487)
+ .+|++..+.-.....+.+. ..++|-.++.....++|.+.
T Consensus 615 G--~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LC 656 (732)
T KOG0614|consen 615 G--SPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLC 656 (732)
T ss_pred C--CCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHH
Confidence 4 4677776644333333332 23556667777777777663
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-20 Score=167.32 Aligned_cols=195 Identities=17% Similarity=0.154 Sum_probs=134.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.+|.|+|+-||.++...+++.+|+|.+.....+ |++... +..+....+.|+++..+++.. +..|-|
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~----~~e~~~---rEid~~rkf~s~~vl~l~dh~---l~~~~D--- 93 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQE----DIEEAL---REIDNHRKFNSPNVLRLVDHQ---LREEKD--- 93 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccchH----HHHHHH---HHHHHHHhhCCcchHHHHHHH---HHhhcc---
Confidence 6799999999999998889999999988644322 222222 222233344578888877743 333322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---CCCHHHH--HHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---GLKVLDL--VNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---~~~~~~~--~~~~i~~~l~~lh~~g 288 (487)
.+...||+..|...|+|.+.....+. -.++.++ +..+++.||+++|+..
T Consensus 94 --------------------------~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~ 147 (302)
T KOG2345|consen 94 --------------------------GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE 147 (302)
T ss_pred --------------------------CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC
Confidence 23556899999999998876554322 2455554 4567888999999999
Q ss_pred --ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH---HHH-----HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 289 --YFHADPHPGNLLATPEGKLAFLDFGMMSETPEE---ARF-----AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 289 --ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
+.|||+||+|||++++|.+++.|||.+....-. .+. .-+.--.++.++.||...- -.-..++.++|+|
T Consensus 148 ~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~v--k~~~ti~ertDIW 225 (302)
T KOG2345|consen 148 PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNV--KSHCTITERTDIW 225 (302)
T ss_pred CcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheec--ccCcccccccchh
Confidence 999999999999999999999999999865321 111 1122223445555554321 1223568899999
Q ss_pred hHHHHHHHHHH
Q 011399 359 PIVPALRNFFD 369 (487)
Q Consensus 359 sl~~~l~~~~~ 369 (487)
|+||++|.++-
T Consensus 226 SLGCtLYa~mf 236 (302)
T KOG2345|consen 226 SLGCTLYAMMF 236 (302)
T ss_pred hhhHHHHHHHH
Confidence 99999999874
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.8e-20 Score=181.15 Aligned_cols=187 Identities=15% Similarity=0.144 Sum_probs=118.7
Q ss_pred cccccccccEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|.+..+|+ .||+|...+........+ ..+.+ ..+....|+|++.+++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~--~~~e~----~~~~~l~h~niv~~~~---------- 76 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE--FMDEA----LIMASMDHPHLVRLLG---------- 76 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHH--HHHHH----HHHHhCCCCCcccEEE----------
Confidence 679999999999999876776 578888765422211100 00000 0011112333333222
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
.+ .....+++|||+++++|.+.........+. ...+..++..++.|+|+.
T Consensus 77 --------------------------~~--~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~ 128 (303)
T cd05110 77 --------------------------VC--LSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 128 (303)
T ss_pred --------------------------EE--cCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 11 123456999999999998875433222333 334457788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|++|+|+||+||+++.++.++|+|||++..+....... ..+......+..|+. ......+.+.|+||+|+.+++
T Consensus 129 ~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~-----~~~~~~~~~~DiwslG~~l~e 203 (303)
T cd05110 129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC-----IHYRKFTHQSDVWSYGVTIWE 203 (303)
T ss_pred CeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHH-----hccCCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998765332110 001111122333443 333445778999999999999
Q ss_pred HHH
Q 011399 367 FFD 369 (487)
Q Consensus 367 ~~~ 369 (487)
+++
T Consensus 204 l~t 206 (303)
T cd05110 204 LMT 206 (303)
T ss_pred HHh
Confidence 886
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-21 Score=184.85 Aligned_cols=207 Identities=21% Similarity=0.275 Sum_probs=126.3
Q ss_pred cccccccccEEEEEEEc----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLK----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||.|+||.||+|.++ ..+..|+||++.+...... ..
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~--~~------------------------------------ 46 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEE--EE------------------------------------ 46 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHH--HH------------------------------------
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccccc--ce------------------------------------
Confidence 56999999999999997 3468999999965422210 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHH--HHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDL--VNTGIQCSLRQLLE 286 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~--~~~~i~~~l~~lh~ 286 (487)
++..|.+.+.++ .++.+.-..-+.......++||||+++++|.++.... ....+.... +..++..|+.|||+
T Consensus 47 ~~~~e~~~l~~l-----~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~ 121 (259)
T PF07714_consen 47 EFLNEIQILRKL-----RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS 121 (259)
T ss_dssp HHHHHHHHHHTH-----SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 122222222222 1222211111222345578999999999999885554 234444443 35678889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.+++|+|++|.||+++.++.+||+|||++............ .........++++....+..+.+.|+||||..+++
T Consensus 122 ~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~e 197 (259)
T PF07714_consen 122 NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKND----SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYE 197 (259)
T ss_dssp TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEES----TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998876221000000 00001112223333344446788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGL 388 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l 388 (487)
+++.. ..+..+.+...+...+
T Consensus 198 i~~~~-~~p~~~~~~~~~~~~~ 218 (259)
T PF07714_consen 198 ILTLG-KFPFSDYDNEEIIEKL 218 (259)
T ss_dssp HHTTS-SGTTTTSCHHHHHHHH
T ss_pred ccccc-cccccccccccccccc
Confidence 99831 1345555555444444
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-20 Score=178.41 Aligned_cols=190 Identities=19% Similarity=0.179 Sum_probs=135.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.||++.|-.++++++.+.+|+|++++..... ..|+.-++......+.. .++|-++.+..-|
T Consensus 256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-dedidwvqtek~vfe~a--sn~pflvglhscf------------ 320 (593)
T KOG0695|consen 256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-DEDIDWVQTEKHVFEQA--SNNPFLVGLHSCF------------ 320 (593)
T ss_pred eeecCcchhhhhheehcccceeeehhhHHHHhcCC-cccchhHHhhHHHHHhc--cCCCeEEehhhhh------------
Confidence 78999999999999999999999999987432211 11222122111111110 0122222222222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCc-HHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE-QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~-~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+..++.+.|.||++||+|.- +.+.++.++...+++...|..+|.|+|+.||+.|
T Consensus 321 -------------------------qtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyr 375 (593)
T KOG0695|consen 321 -------------------------QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYR 375 (593)
T ss_pred -------------------------cccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeee
Confidence 12356789999999999864 4345566777788888999999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCC-C-HHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSET-P-EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|..|+|++..|.+||.|+|+++.- . .+...++|++ |.++++++..-.-+...+|.|++|+.+.||+.+
T Consensus 376 dlkldnvlldaeghikltdygmcke~l~~gd~tstfcgt--------pnyiapeilrgeeygfsvdwwalgvlmfemmag 447 (593)
T KOG0695|consen 376 DLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGT--------PNYIAPEILRGEEYGFSVDWWALGVLMFEMMAG 447 (593)
T ss_pred eccccceEEccCCceeecccchhhcCCCCCcccccccCC--------CcccchhhhcccccCceehHHHHHHHHHHHHcC
Confidence 99999999999999999999999863 2 2334445555 555666666555568889999999999999974
Q ss_pred h
Q 011399 371 A 371 (487)
Q Consensus 371 ~ 371 (487)
.
T Consensus 448 r 448 (593)
T KOG0695|consen 448 R 448 (593)
T ss_pred C
Confidence 3
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.5e-19 Score=169.87 Aligned_cols=184 Identities=16% Similarity=0.168 Sum_probs=121.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|.+. ++..||+|..+++.... + ++.+
T Consensus 12 ~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~----------------------------------~------~~~~ 50 (260)
T cd05073 12 KKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSV----------------------------------E------AFLA 50 (260)
T ss_pred eEecCccceEEEEEEec-CCccEEEEecCCChhHH----------------------------------H------HHHH
Confidence 77999999999999876 67789999887542110 0 0122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ .+...+.+...+.+ ...+++|||++|++|.++..... ...+.. ..+..++..++.++|..|++
T Consensus 51 e~~~l~~l----~~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~ 124 (260)
T cd05073 51 EANVMKTL----QHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 124 (260)
T ss_pred HHHHHHhc----CCCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 22222211 12222333333333 55689999999999988754321 112332 33456788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||.||+++.++.++|+|||.+..+.........+......+..|+ ....+..+...|+||+|+.++++++
T Consensus 125 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE-----~~~~~~~~~~~Di~slG~~l~~l~t 198 (260)
T cd05073 125 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-----AINFGSFTIKSDVWSFGILLMEIVT 198 (260)
T ss_pred ccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHh-----HhccCCcCccccchHHHHHHHHHHh
Confidence 9999999999999999999999998776432111111111112233344 3345566888999999999999997
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-19 Score=168.83 Aligned_cols=181 Identities=23% Similarity=0.257 Sum_probs=119.2
Q ss_pred cccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 011399 140 SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNAR 219 (487)
Q Consensus 140 s~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~ 219 (487)
+||+||+|....+|+.||+|+.+....... . ..+...++.+....|+++..+.+.+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~---~---~~~~~e~~~~~~l~~~~i~~~~~~~~----------------- 57 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK---R---ERILREISILKKLKHPNIVRLYDVFE----------------- 57 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH---H---HHHHHHHHHHHhCCCCcHHHHHhhee-----------------
Confidence 589999999987899999999976533211 0 11111111111223566655554321
Q ss_pred HHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 011399 220 RFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGN 298 (487)
Q Consensus 220 ~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~N 298 (487)
.....+++|||+++++|.++..... ........+..++..++.++|..|++|+|++|.|
T Consensus 58 --------------------~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~n 117 (244)
T smart00220 58 --------------------DEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPEN 117 (244)
T ss_pred --------------------eCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHH
Confidence 1145689999999999987744322 1222233344667779999999999999999999
Q ss_pred eEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 299 LLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 299 ili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+++.++.++++|||.+..+...... . .....+..++++....+..+++.|+|++|+.+++++++
T Consensus 118 i~~~~~~~~~l~d~~~~~~~~~~~~~--~-----~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~ 182 (244)
T smart00220 118 ILLDEDGHVKLADFGLARQLDPGGLL--T-----TFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTG 182 (244)
T ss_pred eEECCCCcEEEccccceeeecccccc--c-----cccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 99999999999999999887654200 0 01111222333333345567789999999999999874
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4e-20 Score=194.02 Aligned_cols=200 Identities=21% Similarity=0.258 Sum_probs=126.0
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHH--HHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA--IGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~--~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
..+.|+-+ +.||.|.+|+||+++.+.+|+.+|||++.+..... ++.+..+++... .|+|++.....+
T Consensus 17 p~d~~ei~--evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~---------~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 17 PADIFEII--EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS---------HHPNVATFYGAF 85 (953)
T ss_pred CCCccEEE--EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc---------CCCCcceEEEEE
Confidence 34445544 67999999999999999999999999998764332 222222221111 122222221111
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHHHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQ 278 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~ 278 (487)
.. .-.....+.|||||||.||+..|+..--. ..+.....+.+.++
T Consensus 86 ~k--------------------------------~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~l 133 (953)
T KOG0587|consen 86 IK--------------------------------KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREIL 133 (953)
T ss_pred EE--------------------------------ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHH
Confidence 00 00122466899999999999999854322 12333445556677
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
.++.++|.+.++|||+|-.|||++.+|.|||+|||++.+++.. .|.++.|+..+|+ |+.++.+--.-.-++...|
T Consensus 134 rgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMA---PEViac~e~~d~tyd~R~D 210 (953)
T KOG0587|consen 134 RGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMA---PEVIACDESPDATYDYRSD 210 (953)
T ss_pred HHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCccccc---ceeeecccCCCCCcccccc
Confidence 8999999999999999999999999999999999999999765 3444555544333 2222111000011234456
Q ss_pred cchHHHHHHHHHH
Q 011399 357 VTPIVPALRNFFD 369 (487)
Q Consensus 357 i~sl~~~l~~~~~ 369 (487)
+||||.+--|+-+
T Consensus 211 ~WsLGITaIElad 223 (953)
T KOG0587|consen 211 LWSLGITAIEMAE 223 (953)
T ss_pred hhhccceeehhcC
Confidence 7777766555544
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=175.42 Aligned_cols=139 Identities=15% Similarity=0.138 Sum_probs=91.8
Q ss_pred CCCceEEEeecCCCCcCcHHHHHhc---------------CCCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcC
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIESQ---------------GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATP 303 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~ 303 (487)
....+++|||+.|++|.++...... .... ...+..++..++.|+|+.|++|+|+||.||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 3557899999999999887543210 1122 2234567888999999999999999999999999
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHH-HHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHH
Q 011399 304 EGKLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFK 382 (487)
Q Consensus 304 ~g~i~l~DFGla~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~ 382 (487)
++.++|+|||+++.+......... .......+ ++++.+..+..+.+.|+||+|+.++++++. ...++...+..
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y-----~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~ 243 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKW-----MAPEALFDRVYTHQSDVWSFGVLLWEIFTL-GGSPYPGIPVE 243 (334)
T ss_pred CCcEEECCcccceecccccccccccCCCcCceE-----cCHHHhccCCcCchhhhHHHHHHHHHHHhc-CCCCCCCCCHH
Confidence 999999999999866432111000 00001122 333333344557789999999999999862 11344444444
Q ss_pred HHH
Q 011399 383 TIV 385 (487)
Q Consensus 383 ~~~ 385 (487)
...
T Consensus 244 ~~~ 246 (334)
T cd05100 244 ELF 246 (334)
T ss_pred HHH
Confidence 433
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-18 Score=160.45 Aligned_cols=161 Identities=19% Similarity=0.182 Sum_probs=108.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHH--HHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA--IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~--~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
++||+|++|+||+|... +|+.||||+.+++.... ...+.+.+. ...+.+. ... .+..+
T Consensus 21 ~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~----------~~~~~~~---~~~------~~~~~ 80 (198)
T cd05144 21 NQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLG----------DRKHASW---LYL------SRLAA 80 (198)
T ss_pred CccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHh----------ccccchh---HHH------hHHHH
Confidence 78999999999999986 89999999987653111 000000000 0001111 111 11123
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
..|...+..+.+. .+.+|.++.. ...++||||++|+++.+.... .....+..++..++.++|..|++|
T Consensus 81 ~~E~~~l~~l~~~-----~i~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l~~lh~~gi~H 148 (198)
T cd05144 81 QKEFAALKALYEE-----GFPVPKPIDW--NRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEIVKAYKHGIIH 148 (198)
T ss_pred HHHHHHHHHHHHc-----CCCCCceeec--CCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHHHHHHHCCCCc
Confidence 4455555555432 2456776653 566999999999998765221 223345567778899999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI 326 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~ 326 (487)
+|+||+||++++++.++|+|||++..++.+.+..+
T Consensus 149 ~Dl~p~Nill~~~~~~~liDfg~~~~~~~~~~~~~ 183 (198)
T cd05144 149 GDLSEFNILVDDDEKIYIIDWPQMVSTDHPNAEEL 183 (198)
T ss_pred CCCCcccEEEcCCCcEEEEECCccccCCCccHHHH
Confidence 99999999999999999999999998887766554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-20 Score=196.15 Aligned_cols=227 Identities=16% Similarity=0.218 Sum_probs=155.7
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|.||.||+|+.. .+.+-||||.++.....+.+.|++ +.++.+..+.|+||+.++..+
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~------REaeLla~l~H~nIVrLlGVC------- 558 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFR------REAELLAELQHPNIVRLLGVC------- 558 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHH------HHHHHHHhccCCCeEEEEEEE-------
Confidence 67999999999999874 134689999987654443333321 111111122244444444322
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---------C----CCHHH--HH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------G----LKVLD--LV 273 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------~----~~~~~--~~ 273 (487)
....+.++|.|||+.|+|.++...... . ++..+ .+
T Consensus 559 ------------------------------~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~i 608 (774)
T KOG1026|consen 559 ------------------------------REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHI 608 (774)
T ss_pred ------------------------------ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHH
Confidence 234678999999999999998654321 1 23333 45
Q ss_pred HHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHH-HHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 274 NTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 274 ~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+.||+.|+.||-++.|+||||-..|.||.++-.|||+||||++.+-..+..... .++. ...+|.++-+--|-.+
T Consensus 609 A~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~l-----PIRWMppEsIly~kFT 683 (774)
T KOG1026|consen 609 ATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLL-----PIRWMPPESILYGKFT 683 (774)
T ss_pred HHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCcee-----eeecCCHHHhhcCccc
Confidence 688999999999999999999999999999999999999999987655443322 1111 1234444444567779
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHH--HHHhhCCCCCChHHHHHHHHH
Q 011399 353 PDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLG--AVLYQYPFNVPAYYALILRSL 410 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~p~~~~~l~r~l 410 (487)
.++|+||+|+.|+|+|+-. ..|..+.+..++++-+. .+ -..|-..|+.+-.+++..
T Consensus 684 teSDVWs~GVvLWEIFsyG-~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~C 741 (774)
T KOG1026|consen 684 TESDVWSFGVVLWEIFSYG-KQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLEC 741 (774)
T ss_pred chhhhhhhhhhhhhhhccc-cCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHH
Confidence 9999999999999999833 46777778788776652 23 345667788776665544
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.8e-19 Score=170.28 Aligned_cols=190 Identities=16% Similarity=0.174 Sum_probs=115.7
Q ss_pred ccccccccEEEEEEEc--cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 135 PIAAASLGQVYKAQLK--YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.||+|+||.||+|... .++..+|+|..+...... .+.++.
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~~ 43 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ--------------------------------------EQMKFL 43 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH--------------------------------------HHHHHH
Confidence 5899999999999865 245689999886542111 011122
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhc----CCCH--HHHHHHHHHHHHHHH
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQ----GLKV--LDLVNTGIQCSLRQL 284 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~----~~~~--~~~~~~~i~~~l~~l 284 (487)
.|...+.++. ++. +++++ ....+..++||||++|++|.++...... ..+. ...+..++..++.|+
T Consensus 44 ~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 116 (269)
T cd05087 44 EEAQPYRSLQ-----HSN--LLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHL 116 (269)
T ss_pred HHHHHHHhCC-----CCC--EeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH
Confidence 2332222221 222 22222 1233557899999999999887543221 1222 233456788899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHH--cCCCCCCCCcchHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYA--LDFLSPDVDVTPIV 361 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~Di~sl~ 361 (487)
|+.|++|+|+||.||+++.++.++|+|||++........... ........+..||........ ....+.+.|+||+|
T Consensus 117 H~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05087 117 HKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLG 196 (269)
T ss_pred HHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHH
Confidence 999999999999999999999999999999875432211000 000001112233332110000 01236789999999
Q ss_pred HHHHHHHH
Q 011399 362 PALRNFFD 369 (487)
Q Consensus 362 ~~l~~~~~ 369 (487)
+.++++++
T Consensus 197 ~~l~el~~ 204 (269)
T cd05087 197 VTIWELFE 204 (269)
T ss_pred HHHHHHHh
Confidence 99999985
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.8e-19 Score=170.73 Aligned_cols=193 Identities=17% Similarity=0.154 Sum_probs=116.8
Q ss_pred cccccccccEEEEEEEcc---CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKY---SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~---~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|++|.||+|.++. +|+.||||+...........+ ...+++ ..+....|++++++.+.+..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~-~~~~E~----~~l~~l~h~~i~~~~~~~~~------- 72 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIE-EFLREA----ACMKEFDHPNVIKLIGVSLR------- 72 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHH-HHHHHH----HHHhcCCCCCcceEEEEEcc-------
Confidence 579999999999998753 578999999875432211000 000000 00111123333332221100
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCC---CCceEEEeecCCCCcCcHHHHHhc-----CCC--HHHHHHHHHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYT---SGKVLTMEWVEGVKLNEQVAIESQ-----GLK--VLDLVNTGIQCS 280 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~---~~~~LvmE~~~G~~L~~~~~~~~~-----~~~--~~~~~~~~i~~~ 280 (487)
.... ...++++||+.+++|.+....... ..+ ....+..++..+
T Consensus 73 ---------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~ 125 (273)
T cd05074 73 ---------------------------SRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG 125 (273)
T ss_pred ---------------------------CCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Confidence 0000 123688999999998776433211 122 234455778889
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
+.|+|+.|++|+|+||.||+++.++.++++|||++..+.......... .....+..++++....+..+.+.|+||+
T Consensus 126 l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~~sDi~sl 201 (273)
T cd05074 126 MEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGC----ASKLPVKWLALESLADNVYTTHSDVWAF 201 (273)
T ss_pred HHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCC----CccCchhhcCHhHHhcCccchhhhhHHH
Confidence 999999999999999999999999999999999988764321100000 0001122223333344555778999999
Q ss_pred HHHHHHHHH
Q 011399 361 VPALRNFFD 369 (487)
Q Consensus 361 ~~~l~~~~~ 369 (487)
|+.++++++
T Consensus 202 G~il~el~~ 210 (273)
T cd05074 202 GVTMWEIMT 210 (273)
T ss_pred HHHHHHHhh
Confidence 999999986
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=174.65 Aligned_cols=140 Identities=21% Similarity=0.231 Sum_probs=96.9
Q ss_pred cccccccccEEEEEEEcc-CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKY-SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||+|+||+||+|+++. +|+.||||+..+..... .. +.... .+.
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~---------------------------~~~~~------~~~ 69 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SK---------------------------PLARH------LAA 69 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-cc---------------------------HHHHH------HHH
Confidence 779999999999999875 68888999875321000 00 00011 144
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+|++.+.++. ++.+ +|.++.. ...+|||||++|++|... ... .. ..+..++..++.++|+.||+||
T Consensus 70 ~E~~iL~~L~-----h~~i-v~~l~~~--~~~~LVmE~~~G~~L~~~---~~~--~~-~~~~~~i~~aL~~lH~~gIiHr 135 (365)
T PRK09188 70 REIRALKTVR-----GIGV-VPQLLAT--GKDGLVRGWTEGVPLHLA---RPH--GD-PAWFRSAHRALRDLHRAGITHN 135 (365)
T ss_pred HHHHHHHhcc-----CCCC-CcEEEEc--CCcEEEEEccCCCCHHHh---Ccc--ch-HHHHHHHHHHHHHHHHCCCeeC
Confidence 4555554442 2222 4555543 567999999999988632 111 11 2345677789999999999999
Q ss_pred CC-CCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 293 DP-HPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 293 Dl-kp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
|+ ||+|||++.+|+++|+|||+++.+...
T Consensus 136 DL~KP~NILv~~~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 136 DLAKPQNWLMGPDGEAAVIDFQLASVFRRR 165 (365)
T ss_pred CCCCcceEEEcCCCCEEEEECccceecccC
Confidence 99 999999999999999999999977543
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-19 Score=163.41 Aligned_cols=181 Identities=20% Similarity=0.290 Sum_probs=115.7
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||+|++|+||++....+|+.+++|+..+..... ..+. +.+|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--------------------------------~~~~------~~~e~ 42 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--------------------------------LLEE------LLREI 42 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--------------------------------HHHH------HHHHH
Confidence 689999999999998679999999998653321 0011 22233
Q ss_pred HHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 216 QNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
+.+.++.+ + .++.++ .......+++|||++|++|.++........+. ...+..++..++.++|..|++|
T Consensus 43 ~~~~~l~~-----~--~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H 115 (215)
T cd00180 43 EILKKLNH-----P--NIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIH 115 (215)
T ss_pred HHHHhcCC-----C--CeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 33332221 2 233333 23335789999999999998875433123333 3344567778999999999999
Q ss_pred cCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHH
Q 011399 292 ADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 292 ~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~ 367 (487)
+|++|+||+++. ++.++|+|||.+........ .... .......+.++....+ ..+.+.|+|++|+.++++
T Consensus 116 ~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~-----~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKT-----IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred cCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhc-----ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 999999999999 89999999999987654421 0000 0111111222222222 445667788877777665
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.3e-19 Score=177.03 Aligned_cols=227 Identities=17% Similarity=0.129 Sum_probs=159.8
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
...||-|.||.||.|.++.-.-.||||.++.+.- .+.++......+....|+|+++++..+...
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM--------eveEFLkEAAvMKeikHpNLVqLLGVCT~E-------- 335 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--------EVEEFLKEAAVMKEIKHPNLVQLLGVCTHE-------- 335 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcch--------hHHHHHHHHHHHHhhcCccHHHHhhhhccC--------
Confidence 4679999999999999998888999999874421 222233333333445589999888865421
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-CCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
-..||+.|||..|.|.++.+.... ... ....+..||.++++||...+|
T Consensus 336 -----------------------------pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknF 386 (1157)
T KOG4278|consen 336 -----------------------------PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNF 386 (1157)
T ss_pred -----------------------------CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhh
Confidence 455799999999999988553221 122 223446788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
||||+-..|.|+.++..+|++|||+++.++.++..+-+|.-.-+-.-.|+.++ ..-.+-+.|+|+||+.|+|+.+
T Consensus 387 IHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLA-----yNtFSiKSDVWAFGVLLWEIAT 461 (1157)
T KOG4278|consen 387 IHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA-----YNTFSIKSDVWAFGVLLWEIAT 461 (1157)
T ss_pred hhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCccccc-----ccccccchhhHHHHHHHHHHHh
Confidence 99999999999999999999999999998877544333321112223344433 3334678999999999999987
Q ss_pred HhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSL 410 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l 410 (487)
|.-.|..+++..++..-+.+.. .+.|-++||..-.++++.
T Consensus 462 -YGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraC 502 (1157)
T KOG4278|consen 462 -YGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRAC 502 (1157)
T ss_pred -cCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHH
Confidence 2234666677666554333222 245778999988888876
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.1e-18 Score=155.41 Aligned_cols=165 Identities=23% Similarity=0.228 Sum_probs=108.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|++|+||+|.+. +|+.||||+.+++.......+...+ ...+....+.++..+...+ ...
T Consensus 3 ~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---------~~~ 66 (187)
T cd05119 3 GPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRT------GDYRFGRKKSNWRYLSRLW---------AEK 66 (187)
T ss_pred cccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhH------HHHHhccCCcchhhhhhHH---------HHH
Confidence 57999999999999987 8999999999876433222111110 0111112234443333322 123
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC-CHHHHHHHHHHHHHHHHHH-CCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL-KVLDLVNTGIQCSLRQLLE-YGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~-~~~~~~~~~i~~~l~~lh~-~givH 291 (487)
|..++.++... .+.+|+++.. ...++||||++|+.+.... +..... +....+..++..++.++|. .|++|
T Consensus 67 e~~~l~~l~~~-----~~~~~~~~~~--~~~~lv~e~~~g~~~~~~~-l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH 138 (187)
T cd05119 67 EFRNLKRLYEA-----GVPVPKPIDL--NRHVLVMEFIGGDGIPAPR-LKDVRLLEDPEELYDQILELMRKLYREAGLVH 138 (187)
T ss_pred HHHHHHHHHHc-----CCCCCceEec--CCCEEEEEEeCCCCccChh-hhhhhhcccHHHHHHHHHHHHHHHhhccCcCc
Confidence 44555555432 2456666643 4569999999995543211 111111 3445566778889999999 99999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEAR 323 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~ 323 (487)
+|+||+||+++ ++.++++|||.+........
T Consensus 139 ~Dl~p~Nili~-~~~~~liDfg~a~~~~~~~~ 169 (187)
T cd05119 139 GDLSEYNILVD-DGKVYIIDVPQAVEIDHPNA 169 (187)
T ss_pred CCCChhhEEEE-CCcEEEEECcccccccCcch
Confidence 99999999999 99999999999988766543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.1e-19 Score=181.27 Aligned_cols=205 Identities=18% Similarity=0.167 Sum_probs=143.4
Q ss_pred cccccccccEEEEEEEcc-CC--cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKY-SG--QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-~g--~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.|++|.+.. +| ..||||+++++....+ .+ |
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~----------------------------md----------d 157 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAI----------------------------MD----------D 157 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchh----------------------------HH----------H
Confidence 569999999999999863 23 4899999987633211 11 4
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC---CCHHHHHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG---LKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~---~~~~~~~~~~i~~~l~~lh~~ 287 (487)
|++|+..+-++.+- .-|+.-.|+.+ ....+|||++++|+|.+.......+ ....-.+..||..++.||-..
T Consensus 158 flrEas~M~~L~H~----hliRLyGvVl~--qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk 231 (1039)
T KOG0199|consen 158 FLREASHMLKLQHP----HLIRLYGVVLD--QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK 231 (1039)
T ss_pred HHHHHHHHHhccCc----ceeEEeeeecc--chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh
Confidence 67777777666432 22333333332 5667999999999998764431111 233445678899999999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
++||||+-..|+|+-....|||+|||+++.+...... .+.. -..-.+.+++.+-+..+-.+...|+|++|++++|
T Consensus 232 rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p----~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWE 307 (1039)
T KOG0199|consen 232 RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAP----QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWE 307 (1039)
T ss_pred hhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecC----CCcCcccccCHhHhccccccccchhhhhhhhHHh
Confidence 9999999999999999889999999999998765321 1110 0112345667777778888999999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDG 387 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~ 387 (487)
||+ |...+.-+.+-..++..
T Consensus 308 MFt-yGEePW~G~~g~qIL~~ 327 (1039)
T KOG0199|consen 308 MFT-YGEEPWVGCRGIQILKN 327 (1039)
T ss_pred hhc-cCCCCCCCCCHHHHHHh
Confidence 997 23345444444444433
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-18 Score=166.04 Aligned_cols=189 Identities=15% Similarity=0.100 Sum_probs=119.2
Q ss_pred cccccccccEEEEEEEcc----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKY----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|.+.. ++..|++|........... .
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~---~----------------------------------- 53 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQV---T----------------------------------- 53 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHH---H-----------------------------------
Confidence 679999999999999874 2689999988643221100 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-------cCCCHH--HHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-------QGLKVL--DLVNTGIQC 279 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-------~~~~~~--~~~~~~i~~ 279 (487)
.+..|...+.++ ++++ +.+.....+.....++++||+++++|.++..... ...+.. ..+..++..
T Consensus 54 ~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~ 128 (280)
T cd05043 54 LLLQESCLLYGL-----SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIAC 128 (280)
T ss_pred HHHHHHHHHHhC-----CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHH
Confidence 011222222211 1111 1111112222356789999999999988754322 112332 344567888
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
++.|+|+.|++|+|+||+||+++.++.++++|||+++.+.+......... ..+....++++.......+.+.|+||
T Consensus 129 ~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~----~~~~~~y~apE~~~~~~~~~~~Di~s 204 (280)
T cd05043 129 GMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDN----ENRPVKWMALESLVNKEYSSASDVWS 204 (280)
T ss_pred HHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCC----CCcchhccCHHHHhcCCCCchhhHHH
Confidence 99999999999999999999999999999999999987643211000000 00111223333333444578899999
Q ss_pred HHHHHHHHHH
Q 011399 360 IVPALRNFFD 369 (487)
Q Consensus 360 l~~~l~~~~~ 369 (487)
+|+.++++++
T Consensus 205 lG~~l~el~~ 214 (280)
T cd05043 205 FGVLLWELMT 214 (280)
T ss_pred hHHHHHHHhc
Confidence 9999999987
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-19 Score=181.66 Aligned_cols=184 Identities=17% Similarity=0.239 Sum_probs=129.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCC--hHHHH---------HHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG--IEEAI---------GLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~--~~~~~---------~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.++|+|+||+|+.|.++.+...|+||.+.+. ..+.+ -.++++|..+. .-.|+||+++++-|+
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~-------~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLN-------KHSHENILKLLDFFE 639 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhh-------hcCccchhhhhheee
Confidence 7899999999999999988999999988643 11111 22233333332 223677777777554
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeec-CCCCcCcHHHHH-hcCCCHHHHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWV-EGVKLNEQVAIE-SQGLKVLDLVNTGIQCS 280 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~-~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~ 280 (487)
+. ...||+||-- +|.+|.+++..+ ...+...+++..|+.++
T Consensus 640 dd-------------------------------------d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~ag 682 (772)
T KOG1152|consen 640 DD-------------------------------------DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAG 682 (772)
T ss_pred cC-------------------------------------CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhc
Confidence 32 3446999865 677888876543 34566788999999999
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
+++||..||+|||||-+|+.++.+|-++|+|||.+......--..+.|++.+ ..||.+. .-.|.+.+-|||++
T Consensus 683 i~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~---aapevl~----g~~y~gk~qdiwal 755 (772)
T KOG1152|consen 683 IKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDY---AAPEVLG----GEKYLGKPQDIWAL 755 (772)
T ss_pred cccccccCceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccc---cchhhhC----CCccCCCcchhhhh
Confidence 9999999999999999999999999999999999887654433334444322 2233321 22355667788888
Q ss_pred HHHHHHHH
Q 011399 361 VPALRNFF 368 (487)
Q Consensus 361 ~~~l~~~~ 368 (487)
|..+|.++
T Consensus 756 gillytiv 763 (772)
T KOG1152|consen 756 GILLYTIV 763 (772)
T ss_pred hheeeEEE
Confidence 87766543
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-18 Score=172.47 Aligned_cols=193 Identities=17% Similarity=0.119 Sum_probs=128.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.+|+|.||.||+|.+ +++.||||+......+.+..+-++... ....|+||.+++..=+..
T Consensus 216 eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~l--------p~m~h~nIl~Fi~~ekr~--------- 276 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYSL--------PGMKHENILQFIGAEKRG--------- 276 (534)
T ss_pred HHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHhc--------cCccchhHHHhhchhccC---------
Confidence 5699999999999999 479999999987666655554433321 133577777776531110
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHH-------
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLE------- 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~------- 286 (487)
.......+||+||-+.|+|.++...+.......-.+...+..||.|||+
T Consensus 277 ------------------------t~~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~ 332 (534)
T KOG3653|consen 277 ------------------------TADRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDH 332 (534)
T ss_pred ------------------------CccccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCC
Confidence 0001356899999999999999554444444444455667779999996
Q ss_pred --CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcchHH
Q 011399 287 --YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALD--FLSPDVDVTPIV 361 (487)
Q Consensus 287 --~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~Di~sl~ 361 (487)
.+|.|||+|..||||..|++..|+|||++..+.+... ....+-+++.-|..||.+-..+ .+. -.-..+|++|+|
T Consensus 333 ~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgai-nl~d~~Afkr~DvYamg 411 (534)
T KOG3653|consen 333 HKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAI-NLQDRDAFKRIDVYAMG 411 (534)
T ss_pred CCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhc-ccccHHHHHHHHHHHHH
Confidence 3699999999999999999999999999998865421 1222333333333444432111 010 001246888888
Q ss_pred HHHHHHHHH
Q 011399 362 PALRNFFDD 370 (487)
Q Consensus 362 ~~l~~~~~~ 370 (487)
-.++|++++
T Consensus 412 LVLWEi~SR 420 (534)
T KOG3653|consen 412 LVLWEIASR 420 (534)
T ss_pred HHHHHHHhh
Confidence 888888864
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-19 Score=174.40 Aligned_cols=189 Identities=17% Similarity=0.199 Sum_probs=131.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|-||.||+|.++ |+.||||+....-++.+.++-++.+.+. ++|.||..++..=.
T Consensus 217 e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvm--------LRHENILgFIaaD~----------- 275 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVM--------LRHENILGFIAADN----------- 275 (513)
T ss_pred EEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHH--------hccchhhhhhhccc-----------
Confidence 77999999999999997 9999999998877777777776666554 34777766655210
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHH--HHHHHHHHHHHH-----
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVN--TGIQCSLRQLLE----- 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~--~~i~~~l~~lh~----- 286 (487)
.+. ...++.|||.+|-+.|+|.|+. ....++....+. ..+.++|.+||.
T Consensus 276 ------------~~~----------gs~TQLwLvTdYHe~GSL~DyL--~r~tv~~~~ml~LalS~AsGLaHLH~eI~GT 331 (513)
T KOG2052|consen 276 ------------KDN----------GSWTQLWLVTDYHEHGSLYDYL--NRNTVTTEGMLKLALSIASGLAHLHMEIVGT 331 (513)
T ss_pred ------------cCC----------CceEEEEEeeecccCCcHHHHH--hhccCCHHHHHHHHHHHhhhHHHHHHHHhcC
Confidence 111 1237889999999999999994 445566655544 446679999994
Q ss_pred ---CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH------HHHHHHHHHHhcCHHHHHHHHHHcCCCC-CCCC
Q 011399 287 ---YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF------AIIGHVVHMVNRDYEAMARDYYALDFLS-PDVD 356 (487)
Q Consensus 287 ---~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~D 356 (487)
-.|-|||+|..||||.++|.+.|+|+|+|...+..... .-+|+-.+| .||.+.+.+-.--+-+ ...|
T Consensus 332 qgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYM---APEvLdetin~~~Fesyk~AD 408 (513)
T KOG2052|consen 332 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYM---APEVLDETINMKHFESYKRAD 408 (513)
T ss_pred CCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeecc---ChHHhhhhcChhhhhhhhHHH
Confidence 35999999999999999999999999999876544210 012332222 2333322211001111 2369
Q ss_pred cchHHHHHHHHHHH
Q 011399 357 VTPIVPALRNFFDD 370 (487)
Q Consensus 357 i~sl~~~l~~~~~~ 370 (487)
|||||-.++|+..+
T Consensus 409 IYafgLVlWEiarR 422 (513)
T KOG2052|consen 409 IYAFGLVLWEIARR 422 (513)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998753
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-19 Score=181.14 Aligned_cols=182 Identities=23% Similarity=0.254 Sum_probs=128.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..+|+|++|.||+|+++.+|+..|||+++-...+.+..+ .. ..-....-.|+||+.++..+-..
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~i----qq---ei~~~~dc~h~nivay~gsylr~--------- 84 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGI----QQ---EIGMLRDCRHPNIVAYFGSYLRR--------- 84 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCcccccc----cc---ceeeeecCCCcChHHHHhhhhhh---------
Confidence 579999999999999999999999999974332222111 11 00111234588888888765432
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
...+++||||.||+|.+..... ...+.....+.+....+++|+|+.|=+||
T Consensus 85 ----------------------------dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hR 136 (829)
T KOG0576|consen 85 ----------------------------DKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHR 136 (829)
T ss_pred ----------------------------cCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccc
Confidence 5678999999999999863321 11223334455666679999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHH---HHcCCCCCCCCcchHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDY---YALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|+|-+||++++.|.+++.|||.+..++.. .|..+.|+ +.+|+.++ ..-|-.....|+|++|..--|+
T Consensus 137 diKGanilltd~gDvklaDfgvsaqitati~KrksfiGt--------pywmapEvaaverkggynqlcdiwa~gitAiel 208 (829)
T KOG0576|consen 137 DIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGT--------PYWMAPEVAAVERKGGYNQLCDIWALGITAIEL 208 (829)
T ss_pred cccccceeecccCceeecccCchhhhhhhhhhhhcccCC--------ccccchhHHHHHhcccccccccccccccchhhh
Confidence 99999999999999999999999998654 45555555 33333333 2344446778999988554443
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-18 Score=161.04 Aligned_cols=198 Identities=11% Similarity=0.108 Sum_probs=125.7
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhh-hhhcccCCHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINK-YVDIITTDVVALIDEF 201 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~-~~~~~~~~i~~~~~~~ 201 (487)
.+++.|.-. +.+|.|-||.+-+|+++.+.+.+|+|-........ +.+.+...- +.-..|.+|+.-++.
T Consensus 21 ~l~d~y~I~--k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~--------~dF~rEfhY~~~Ls~H~hIi~tY~v- 89 (378)
T KOG1345|consen 21 DLEDVYTIN--KQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQ--------ADFVREFHYSFFLSPHQHIIDTYEV- 89 (378)
T ss_pred chhhhhhHH--HHhcccceeeEEeeeccCCceEEEeeccCcchhhH--------HHHHHHhccceeeccchhhhHHHHH-
Confidence 345555544 67999999999999999999999999875332111 111111100 000012233322221
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSL 281 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l 281 (487)
.| +-+...+.+|||++-|+|..-......|+...+.+..++.+|+
T Consensus 90 ----------------------aF-------------qt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi 134 (378)
T KOG1345|consen 90 ----------------------AF-------------QTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAI 134 (378)
T ss_pred ----------------------Hh-------------hcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHH
Confidence 11 1123457999999999997654344455666778889999999
Q ss_pred HHHHHCCccccCCCCCCeEEc--CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHcCCCCCCCCcc
Q 011399 282 RQLLEYGYFHADPHPGNLLAT--PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVN-RDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~--~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
.|+|+.+++|||||.+||||- +.-+|||+|||.....+... ....+.++ ..|+.+....-..-.+.|..|+|
T Consensus 135 ~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~W 209 (378)
T KOG1345|consen 135 EFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIW 209 (378)
T ss_pred HHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee-----hhhhhhcccCCcHHHhhccccceEecccccch
Confidence 999999999999999999996 33589999999988764321 11112222 22333222111111347889999
Q ss_pred hHHHHHHHHHHHh
Q 011399 359 PIVPALRNFFDDA 371 (487)
Q Consensus 359 sl~~~l~~~~~~~ 371 (487)
.||..++..+++-
T Consensus 210 qfGIi~f~cltG~ 222 (378)
T KOG1345|consen 210 QFGIIFFYCLTGK 222 (378)
T ss_pred heeeeeeeeecCC
Confidence 9999988777743
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-18 Score=197.00 Aligned_cols=179 Identities=15% Similarity=0.137 Sum_probs=121.5
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.+.||+|+||.||+|+++.+|..||||..+...... ..+++.+ ....|+|++++++.+
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~l----------~~l~HpnIv~~~~~~----------- 752 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP-SSEIADM----------GKLQHPNIVKLIGLC----------- 752 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc-HHHHHHH----------hhCCCCCcceEEEEE-----------
Confidence 367999999999999998799999999886331110 1111111 122355555443321
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHH---HCCc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL---EYGY 289 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~gi 289 (487)
......++||||++|++|.++. +.........+..++..|+.|+| ..++
T Consensus 753 --------------------------~~~~~~~lv~Ey~~~g~L~~~l--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 804 (968)
T PLN00113 753 --------------------------RSEKGAYLIHEYIEGKNLSEVL--RNLSWERRRKIAIGIAKALRFLHCRCSPAV 804 (968)
T ss_pred --------------------------EcCCCCEEEEeCCCCCcHHHHH--hcCCHHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 1234568999999999998874 33444455566788889999999 6699
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+||.||+++.++..++. ||..+........ . +.+.+++++....+.++.++|+||+|+.++|+++
T Consensus 805 iH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~--~--------~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~t 873 (968)
T PLN00113 805 VVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKC--F--------ISSAYVAPETRETKDITEKSDIYGFGLILIELLT 873 (968)
T ss_pred ecCCCCHHhEEECCCCceEEE-eccccccccCCCc--c--------ccccccCcccccCCCCCcccchhhHHHHHHHHHh
Confidence 999999999999988877665 6665543222110 1 1223344444444556888999999999999998
Q ss_pred Hhc
Q 011399 370 DAL 372 (487)
Q Consensus 370 ~~~ 372 (487)
+..
T Consensus 874 g~~ 876 (968)
T PLN00113 874 GKS 876 (968)
T ss_pred CCC
Confidence 543
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.3e-17 Score=152.12 Aligned_cols=144 Identities=21% Similarity=0.332 Sum_probs=104.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|++|.||+|.. +|..|+||+..+.....-..+ .. .....+.+
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~--------------------------~~-----~~~~~~~~ 48 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELD--------------------------ER-----IRRERTRR 48 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHH--------------------------HH-----HHHHHHHH
Confidence 5799999999999987 688999998765422110000 00 01112445
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|+..+..+.+ ..+.+|.++....+..+++|||++|++|.+.... ... ....+..++..++.++|..|++|+|
T Consensus 49 E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--~~~-~~~~i~~~i~~~l~~lH~~~i~H~D 120 (211)
T PRK14879 49 EARIMSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--NGM-EELELSREIGRLVGKLHSAGIIHGD 120 (211)
T ss_pred HHHHHHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--ccH-HHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5555555542 4577888887667888999999999999887432 211 3344556677899999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCC
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETP 319 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~ 319 (487)
+||+|||++ ++.++++|||+++...
T Consensus 121 l~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 121 LTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred CCcccEEEE-CCCEEEEECCcccCCC
Confidence 999999998 8899999999988744
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-17 Score=171.58 Aligned_cols=204 Identities=17% Similarity=0.132 Sum_probs=148.6
Q ss_pred cccccccccEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|.+-..|+ +||||++...... ..-.+++.... ++..+.|+|+++++.....
T Consensus 702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~--~~s~e~LdeAl----~masldHpnl~RLLgvc~~------ 769 (1177)
T KOG1025|consen 702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP--KASIELLDEAL----RMASLDHPNLLRLLGVCML------ 769 (1177)
T ss_pred ceeccccceeEEeeeEecCCceecceeEEEEeeccCCc--hhhHHHHHHHH----HHhcCCCchHHHHhhhccc------
Confidence 679999999999999865564 7899998633221 11222333222 2334568888888875431
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHH--HHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVN--TGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~--~~i~~~l~~lh~~ 287 (487)
+...||++|+++|.|.|+.+.++..+....++. .||..++.|||++
T Consensus 770 --------------------------------s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q 817 (1177)
T KOG1025|consen 770 --------------------------------STLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ 817 (1177)
T ss_pred --------------------------------chHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc
Confidence 224489999999999999877766665555544 6777899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
+++||||-..|+||..-..+|+.|||+++.+.++..+-.. ....-.+.+|+-+.......++..|+|++|+.++|+
T Consensus 818 rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~----~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWEl 893 (1177)
T KOG1025|consen 818 RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSA----PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL 893 (1177)
T ss_pred chhhhhhhhhheeecCCCeEEEEecchhhccCcccccccc----cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence 9999999999999999999999999999988776433111 112234567777777788889999999999999999
Q ss_pred HHHhccCCCCcCcHHHHHH
Q 011399 368 FDDALNSSVSELNFKTIVD 386 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~ 386 (487)
++ +...|...++..++-.
T Consensus 894 mT-FGa~Py~gi~~~eI~d 911 (1177)
T KOG1025|consen 894 MT-FGAKPYDGIPAEEIPD 911 (1177)
T ss_pred Hh-cCCCccCCCCHHHhhH
Confidence 97 2334556666555443
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-17 Score=156.79 Aligned_cols=196 Identities=19% Similarity=0.198 Sum_probs=123.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|++|+||+|....+++.+|+|..+..... ... + ++..
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~-----------------------------~------~~~~ 46 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQR-----------------------------E------EFLR 46 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHH-----------------------------H------HHHH
Confidence 6799999999999999877999999998755322 000 0 0111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh--cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ .++.+.-..-+.......+++|||++|++|.++..... ........+..++..++.++|..|++|
T Consensus 47 e~~~~~~~-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h 121 (225)
T smart00221 47 EIRILKKL-----KHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVH 121 (225)
T ss_pred HHHHHHhC-----CCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 22222222 11111111111122356789999999999988754332 222233344566777999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
+|++|.||+++.++.++|+|||.+..+.............+..+..++... ...-.+++.|+|++|+.+++++++
T Consensus 122 ~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Dv~~lG~~~~~l~~g- 196 (225)
T smart00221 122 RDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLL----GGKGYGEAVDIWSLGVILYELLWG- 196 (225)
T ss_pred CCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhc----CCCCCCchhhHHHHHHHHHHHHHC-
Confidence 999999999999999999999998877543200000111111223333321 233345689999999999999984
Q ss_pred ccCCCCc
Q 011399 372 LNSSVSE 378 (487)
Q Consensus 372 ~~~~~~~ 378 (487)
..++..
T Consensus 197 -~~pf~~ 202 (225)
T smart00221 197 -PEPFSG 202 (225)
T ss_pred -CCCccc
Confidence 345544
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.2e-18 Score=170.94 Aligned_cols=220 Identities=17% Similarity=0.172 Sum_probs=145.9
Q ss_pred cccccccccEEEEEEEcc--CC--cEEEEEEecCChH----HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY--SG--QIVAVKVQRPGIE----EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~--~g--~~VAVKv~~p~~~----~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.||.|-||.||+|.... .| -.||||.-+.+.. +.+-.+..+ +.++.||+|++++..+.
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~i----------MrnfdHphIikLIGv~~--- 461 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASI----------MRNFDHPHIIKLIGVCV--- 461 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHH----------HHhCCCcchhheeeeee---
Confidence 569999999999999752 23 3688898765322 111111111 22334666666665432
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQ 283 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~ 283 (487)
..+.|||||.++-|.|..+...++..++ ...++..|+..++.|
T Consensus 462 -----------------------------------e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaY 506 (974)
T KOG4257|consen 462 -----------------------------------EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAY 506 (974)
T ss_pred -----------------------------------ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHH
Confidence 1466899999999999988776665554 345667889999999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
||+..++||||-..|||+....-+||+|||+++.+..+....-. ...-...+|+++-...--.+...|+|-||++
T Consensus 507 LeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS-----~~kLPIKWmaPESINfRrFTtASDVWMFgVC 581 (974)
T KOG4257|consen 507 LESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS-----RGKLPIKWMAPESINFRRFTTASDVWMFGVC 581 (974)
T ss_pred HHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc-----ccccceeecCccccchhcccchhhHHHHHHH
Confidence 99999999999999999999999999999999999876432211 1112234455544455555778899999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHH
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALIL 407 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~ 407 (487)
++|++.-- -.|+.+....+++-.+...-+ -.|...||.+-.++
T Consensus 582 mWEIl~lG-vkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 582 MWEILSLG-VKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred HHHHHHhc-CCccccccccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 99998732 245555544444432221111 23445666554333
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.5e-18 Score=177.36 Aligned_cols=239 Identities=19% Similarity=0.277 Sum_probs=149.2
Q ss_pred CCcccccccccE-EEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 132 SPSPIAAASLGQ-VYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 132 ~~~~ig~Gs~gq-V~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
.++.+|.|+-|. ||+|.. .|+.||||.+-++ +.+-..+|++
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------------------------------------~~~~A~rEi~ 554 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------------------------------------FFDFAQREIQ 554 (903)
T ss_pred cHHHcccCCCCcEEEEEee--CCceehHHHHhhH------------------------------------hHHHHHHHHH
Confidence 456788998864 699998 6999999965332 3333445555
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCC-----CCceEEEeecCCCCcCcHHHHH-----hcC-CCHHHHHHHHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYT-----SGKVLTMEWVEGVKLNEQVAIE-----SQG-LKVLDLVNTGIQC 279 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~-----~~~~LvmE~~~G~~L~~~~~~~-----~~~-~~~~~~~~~~i~~ 279 (487)
.++|... + |.|+..|| .-.||+.|.|.. +|.++.... ..+ +++. .+..++..
T Consensus 555 lL~eSD~----------H-----~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~~~-~~l~q~~~ 617 (903)
T KOG1027|consen 555 LLQESDE----------H-----PNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDVEMQSDIDPI-SVLSQIAS 617 (903)
T ss_pred HHHhccC----------C-----CceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccchhhcccccHH-HHHHHHHH
Confidence 5555432 2 22222222 336899999976 888775442 111 2332 33466778
Q ss_pred HHHHHHHCCccccCCCCCCeEEcC---CC--cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATP---EG--KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~---~g--~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (487)
|+.+||+.+|+|||+||+||||+. +| +++|.|||+++.++.... .+.. .+-..+...+.+++....+--...
T Consensus 618 GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s-S~~r--~s~~sGt~GW~APE~L~~~~~~~a 694 (903)
T KOG1027|consen 618 GLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS-SFSR--LSGGSGTSGWQAPEQLREDRKTQA 694 (903)
T ss_pred HHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc-hhhc--ccCCCCcccccCHHHHhccccCcc
Confidence 999999999999999999999985 34 589999999999976532 1221 122334455555555555555667
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHH
Q 011399 355 VDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYF 434 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~ 434 (487)
+|+.|+||.++-.+++- .+|+.+. .. |..-++-| .+.+
T Consensus 695 vDiFslGCvfyYvltgG-~HpFGd~-----~~---------------------R~~NIl~~-------~~~L-------- 732 (903)
T KOG1027|consen 695 VDIFSLGCVFYYVLTGG-SHPFGDS-----LE---------------------RQANILTG-------NYTL-------- 732 (903)
T ss_pred cchhhcCceEEEEecCC-ccCCCch-----HH---------------------hhhhhhcC-------ccce--------
Confidence 89999998876555421 1222211 10 10000000 0000
Q ss_pred HHHhccCCCH--HHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 435 AKRLLTDPNP--YLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 435 ~~~l~~~~~p--~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
-.+ .+.+ ++++.+.+||..||..|.++..-+.||+|
T Consensus 733 -~~L--~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlF 770 (903)
T KOG1027|consen 733 -VHL--EPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLF 770 (903)
T ss_pred -eee--ccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence 001 2223 78889999999999999999999999988
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-16 Score=147.81 Aligned_cols=140 Identities=21% Similarity=0.278 Sum_probs=101.0
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
||+|++|.||+|.. +|..|++|+..+..... ..+... .+...+.+|.
T Consensus 2 ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~-----------------------~~~~~~--------~~~~~~~~E~ 48 (199)
T TIGR03724 2 IAKGAEAIIYLGDF--LGLKAVIKERVPKSYRH-----------------------PELDER--------IRRERTRNEA 48 (199)
T ss_pred CCCCceEEEEEeec--CCccEEEEEecCCcCcC-----------------------chHHHH--------HHHHHHHHHH
Confidence 79999999999985 68999999865432110 000000 0011234455
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCC
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPH 295 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlk 295 (487)
+.+.++.+ ..+.+|.++.......+++|||++|++|.+...... . .+..++..++.++|..|++|+|+|
T Consensus 49 ~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~----~--~~~~~i~~~l~~lH~~gi~H~Dl~ 117 (199)
T TIGR03724 49 RLLSRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN----D--ELLREIGRLVGKLHKAGIVHGDLT 117 (199)
T ss_pred HHHHHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH----H--HHHHHHHHHHHHHHHCCeecCCCC
Confidence 55555543 346788888777777899999999999987632211 1 455677889999999999999999
Q ss_pred CCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 296 PGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 296 p~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
|+||+++ +++++++|||+++...+
T Consensus 118 ~~Nil~~-~~~~~liDfg~a~~~~~ 141 (199)
T TIGR03724 118 TSNIIVR-DDKLYLIDFGLGKYSDE 141 (199)
T ss_pred cceEEEE-CCcEEEEECCCCcCCCc
Confidence 9999998 89999999999987544
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.8e-17 Score=147.62 Aligned_cols=137 Identities=22% Similarity=0.346 Sum_probs=101.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+||||.+|.|..-.+|+.||||+-+.... ||.+ ..
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~------------------------hpqL-----------------~y 59 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAK------------------------HPQL-----------------LY 59 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCC------------------------Ccch-----------------hH
Confidence 789999999999999988999999999764422 3321 11
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCC--ceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSG--KVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~--~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
|++ +...+. ..+.+|.+.+..+.. .+|||+.+ |.+|.++...-...++ ...++..|+..-++|+|.+++
T Consensus 60 Esk----vY~iL~--~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~f 132 (341)
T KOG1163|consen 60 ESK----VYRILQ--GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNF 132 (341)
T ss_pred HHH----HHHHhc--cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhcc
Confidence 222 122222 345677777665544 58999998 8899988665444443 444556778888999999999
Q ss_pred cccCCCCCCeEEc---CCCcEEEEecCCCCCC
Q 011399 290 FHADPHPGNLLAT---PEGKLAFLDFGMMSET 318 (487)
Q Consensus 290 vH~Dlkp~Nili~---~~g~i~l~DFGla~~l 318 (487)
+||||||+|+|.. ...++.+||||+++..
T Consensus 133 iHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 133 IHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ccccCCccceeeccccccceEEEEeccchhhh
Confidence 9999999999987 4467999999999865
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.7e-18 Score=184.04 Aligned_cols=144 Identities=22% Similarity=0.272 Sum_probs=98.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|+||.||+|.+..+|+.||||+++...... ......+..
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~------------------------------~~~~~~~~~------ 53 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN------------------------------KNMVHQVQA------ 53 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC------------------------------HHHHHHHHH------
Confidence 78999999999999998889999999986421100 000011111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+..+ .++.+.-...........+|||||+.|++|.++..... ........+..++..+|.|||..||+||
T Consensus 54 E~~~l~~l-----~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHr 128 (669)
T cd05610 54 ERDALALS-----KSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHR 128 (669)
T ss_pred HHHHHHhc-----CCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence 11111111 12222111112223456799999999999988754321 2233445566788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
||||+|||++.+|.++|+|||+++..
T Consensus 129 DLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 129 DLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred CccHHHEEEcCCCCEEEEeCCCCccc
Confidence 99999999999999999999999854
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.7e-16 Score=169.66 Aligned_cols=226 Identities=17% Similarity=0.146 Sum_probs=145.5
Q ss_pred ccccccccEEEEEEEcc-------CCcEEEEEEecCChHH----HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 135 PIAAASLGQVYKAQLKY-------SGQIVAVKVQRPGIEE----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~-------~g~~VAVKv~~p~~~~----~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
++|+|.||+|++|..+. ....||||..+..... .+..++++|+.+ ..|+|++.++..+.+
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~---------g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKEL---------GKHPNIVNLLGACTQ 373 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHh---------cCCcchhhheeeecc
Confidence 89999999999998641 1468999998766443 222222333222 247888877765432
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---------------cCCC
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLK 268 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~ 268 (487)
.+..++|+||++.|+|.++....+ ..+.
T Consensus 374 -------------------------------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~ 416 (609)
T KOG0200|consen 374 -------------------------------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALT 416 (609)
T ss_pred -------------------------------------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcC
Confidence 256789999999999998865544 1134
Q ss_pred HHHH--HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 011399 269 VLDL--VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY 346 (487)
Q Consensus 269 ~~~~--~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (487)
...+ +..||+.+++||.+.+++|||+-..|||+.++..+|++|||+++...........+.... -...+|+.+-+
T Consensus 417 ~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~---LP~kWmApEsl 493 (609)
T KOG0200|consen 417 TKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGT---LPVKWMAPESL 493 (609)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCc---cceeecCHHHh
Confidence 4443 358888999999999999999999999999999999999999996544321110100000 01224444444
Q ss_pred HcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc-HHHHHHHHHHHHh-hCCCCCChHHHHHHHHH
Q 011399 347 ALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN-FKTIVDGLGAVLY-QYPFNVPAYYALILRSL 410 (487)
Q Consensus 347 ~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~-~~~~~~p~~~~~l~r~l 410 (487)
.-...+.++|+||+|..++|+++- ...|..+.. ...+...+...-+ +.|...++++-.+++..
T Consensus 494 ~~~~ft~kSDVWSfGI~L~EifsL-G~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~C 558 (609)
T KOG0200|consen 494 FDRVFTSKSDVWSFGILLWEIFTL-GGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSC 558 (609)
T ss_pred ccCcccccchhhHHHHHHHHHhhC-CCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 445568889999999999998872 334444444 3333222221111 33444556655555544
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-15 Score=140.52 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.+++|+||+||.+.. .+++++.+...-.-. .++.++ .. -+.+
T Consensus 8 ~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~--------~~~~~~---------------------~~------l~~r 50 (218)
T PRK12274 8 EPLKSDTFGRILLVRG--GERKFVRRDLSAAPW--------WLRGVA---------------------WW------LARR 50 (218)
T ss_pred eeecCCCcceEEEeec--CCceeeecccccchh--------hhhhHH---------------------HH------HHHH
Confidence 6799999999997765 677777665532100 000000 00 1344
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|++.+.++.+ ...+|.++.. ...+++|||++|.+|.+.... ... .+..++..++.++|+.|++|||
T Consensus 51 E~~iL~~L~~------~~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~~-----~~~-~~~~qi~~~L~~lH~~GIvHrD 116 (218)
T PRK12274 51 EALALRQLDG------LPRTPRLLHW--DGRHLDRSYLAGAAMYQRPPR-----GDL-AYFRAARRLLQQLHRCGVAHND 116 (218)
T ss_pred HHHHHHhcCC------CCCCCEEEEE--cCEEEEEeeecCccHHhhhhh-----hhH-HHHHHHHHHHHHHHHCcCccCC
Confidence 5555555432 2346777653 557999999999988643211 111 2345677899999999999999
Q ss_pred C-CCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 294 P-HPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 294 l-kp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
+ ||+|||++++|.++|+|||++....+.
T Consensus 117 L~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 117 LAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred CCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 9 799999999999999999999876544
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.1e-16 Score=143.33 Aligned_cols=140 Identities=13% Similarity=0.035 Sum_probs=84.1
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.++||+|++|.||. +..++.. +||+.+++.... .+. +.
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~---------------------------------~~~------~~ 44 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGG---------------------------------DKE------IR 44 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccch---------------------------------HHH------HH
Confidence 47899999999995 6556666 699987541110 011 22
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCC-----ce-EEEee--cCCCCcCcHHHHHhcCCCHHHHHHHHHHH-HHHH
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSG-----KV-LTMEW--VEGVKLNEQVAIESQGLKVLDLVNTGIQC-SLRQ 283 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~-----~~-LvmE~--~~G~~L~~~~~~~~~~~~~~~~~~~~i~~-~l~~ 283 (487)
+|.+.+..+.+.-.+ +-.|+++|..+.+. .+ +|||| +.+++|.++.... ..+.......++.. +++|
T Consensus 45 rEi~~l~~L~~~~~~--h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~~~~~~~~L~~l~~y 120 (210)
T PRK10345 45 RELKYYAHLSRRLID--WSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEEDVAQLRQLLKKLKRY 120 (210)
T ss_pred HHHHHHHHhhccCCC--CcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHhHHHHHHHHHHHHHH
Confidence 222222333221112 22245555433333 12 78999 5578999885432 23332223344444 4599
Q ss_pred HHHCCccccCCCCCCeEEcCC----CcEEEEecCCCCCC
Q 011399 284 LLEYGYFHADPHPGNLLATPE----GKLAFLDFGMMSET 318 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~----g~i~l~DFGla~~l 318 (487)
+|++||+|||+||+|||++.. ++++|+|||-+..+
T Consensus 121 Lh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 121 LLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 999999999999999999743 37999995444443
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.8e-15 Score=156.63 Aligned_cols=143 Identities=17% Similarity=0.207 Sum_probs=100.8
Q ss_pred CCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 132 SPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 132 ~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
..+.||+|+||.||+|.+. +..+++|+..+...... .+-+. ...-.+
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~--------------------------~~~~~-----~~~~~~ 383 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHP--------------------------ELDER-----LRTERT 383 (535)
T ss_pred ccceeccCCcEEEEEEeec--CccceeEEEecccccch--------------------------hHHHH-----HHHHHH
Confidence 3578999999999999874 55666665433211100 00000 001124
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
.+|++.+.++. ++.+..|.++.......++||||++|++|.+... ....+..++..++.++|+.|++|
T Consensus 384 ~~E~~~l~~l~-----~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~-------~~~~~~~~i~~~L~~lH~~giiH 451 (535)
T PRK09605 384 RAEARLLSEAR-----RAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE-------GNPELVRKVGEIVAKLHKAGIVH 451 (535)
T ss_pred HHHHHHHHhhc-----ccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH-------HHHHHHHHHHHHHHHHHhCCCcc
Confidence 45666666554 2456677777766677899999999999987643 12345567888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
||+||+|||+ .++.++|+|||+++..+.
T Consensus 452 rDlkp~NILl-~~~~~~liDFGla~~~~~ 479 (535)
T PRK09605 452 GDLTTSNFIV-RDDRLYLIDFGLGKYSDL 479 (535)
T ss_pred CCCChHHEEE-ECCcEEEEeCcccccCCc
Confidence 9999999999 688999999999987654
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.1e-15 Score=142.23 Aligned_cols=218 Identities=19% Similarity=0.278 Sum_probs=139.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.||||..+.|+..-+++.||||.-.. +....++.+|++
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPr---------------------------kS~APQLrdEYr----------- 75 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPR---------------------------KSEAPQLRDEYR----------- 75 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccc---------------------------cCCcchHHHHHH-----------
Confidence 679999999999999988999999997531 223344445443
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec--CCCCceEEEeecCCCCcCcHHHHHhcC--CCHHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGVKLNEQVAIESQG--LKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~~L~~~~~~~~~~--~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
+.+.+... ..||.+|.- ..-...||||.+ |.+|.|+....... +....+++.|+..-++++|++.+
T Consensus 76 -------~YKlL~g~--~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~L 145 (449)
T KOG1165|consen 76 -------TYKLLGGT--EGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDL 145 (449)
T ss_pred -------HHHHHcCC--CCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcce
Confidence 33444433 346777643 334468999998 88999886654333 44455666788889999999999
Q ss_pred cccCCCCCCeEEcCCC-----cEEEEecCCCCCCC-HH--------HHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCC
Q 011399 290 FHADPHPGNLLATPEG-----KLAFLDFGMMSETP-EE--------ARFAIIGHVVHMVNRDYEAMARDYYALDF-LSPD 354 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g-----~i~l~DFGla~~l~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~ 354 (487)
|.||+||+|+||...| .|.++|||||+..- ++ ++.++.|+..+|.-.. -+|- -+..
T Consensus 146 IYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINT---------HlGrEQSRR 216 (449)
T KOG1165|consen 146 IYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINT---------HLGREQSRR 216 (449)
T ss_pred eecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeec---------cccchhhhh
Confidence 9999999999998544 49999999999752 22 3445566544443211 1121 1344
Q ss_pred CCcchHHHHHHHHHHHhcc-CCCCcCcHHHHHHHHHHHHh-----hCCCCCChHHHHHHH
Q 011399 355 VDVTPIVPALRNFFDDALN-SSVSELNFKTIVDGLGAVLY-----QYPFNVPAYYALILR 408 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~-----~~~~~~p~~~~~l~r 408 (487)
-|+.++|-.+.-|+.+.++ ..+...+.+.-.+.||..-+ ..-.++|.+|..-++
T Consensus 217 DDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~ 276 (449)
T KOG1165|consen 217 DDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLR 276 (449)
T ss_pred hhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHH
Confidence 5788888887777764432 12233344444455543221 122346666554443
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=144.59 Aligned_cols=144 Identities=21% Similarity=0.211 Sum_probs=89.4
Q ss_pred HHhhhc---ccCCcccccccccEEEEEEEccCCcEEEEEEecCC--hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHH
Q 011399 124 LDSIFS---SISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG--IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALI 198 (487)
Q Consensus 124 ~~~~f~---~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~--~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~ 198 (487)
+.++|. +.-.+.||=|-|++||+|.+..+.+.||+||++.. ..+..-.++++|+.++.-=. .......+++++
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp--~~~~~~~VV~Ll 148 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDP--NDPGKKCVVQLL 148 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCC--CCCCCceeeeee
Confidence 445555 22247899999999999999989999999999743 12222223333333321000 000112244444
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcC--CCHHHHHHH
Q 011399 199 DEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQG--LKVLDLVNT 275 (487)
Q Consensus 199 ~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~--~~~~~~~~~ 275 (487)
|.|... ..-....|||.|++ |..|-.++.. .-.| +...+-+.+
T Consensus 149 D~Fkhs---------------------------------GpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~ 194 (590)
T KOG1290|consen 149 DHFKHS---------------------------------GPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICR 194 (590)
T ss_pred ccceec---------------------------------CCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHH
Confidence 433211 00123458999999 6566665433 2223 445666778
Q ss_pred HHHHHHHHHHH-CCccccCCCCCCeEEcC
Q 011399 276 GIQCSLRQLLE-YGYFHADPHPGNLLATP 303 (487)
Q Consensus 276 ~i~~~l~~lh~-~givH~Dlkp~Nili~~ 303 (487)
|++.+|.|||+ .||||-||||+|||+..
T Consensus 195 qvL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 195 QVLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHHHHHhcCccccCCCcceeeeec
Confidence 99999999995 79999999999999953
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.7e-14 Score=128.31 Aligned_cols=162 Identities=20% Similarity=0.251 Sum_probs=107.4
Q ss_pred cccccccccEEEEEEEcc------CCcEEEEEEecCChHHHHHHHHHHHHHHHHHH---hhhhh-cccCCHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY------SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLI---NKYVD-IITTDVVALIDEFAS 203 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~------~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~---~~~~~-~~~~~i~~~~~~~~~ 203 (487)
.+||+|--+.||.|.... ++..+|||+.+.+..+- +.....+ .++.. ..+.|...++..+.
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F--------k~~~~y~~~~~rf~~~~~k~~~~~~~~~wa- 73 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF--------KNRDKYIKDDYRFKDRFSKLNPRKIIRMWA- 73 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE--------cChhhhccCCcccccCcCCCCHHHHHHHHH-
Confidence 469999999999998652 25899999998553221 0111111 01100 11356666666544
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSL 281 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l 281 (487)
.+|.+++.++.+. .+.+|.++.. ...+|||||+.|..+... .+.....+. ...+..++..++
T Consensus 74 --------~kE~r~L~rl~~~-----Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~~~i~~~i~~~l 137 (197)
T cd05146 74 --------EKEMHNLKRMQKA-----GIPCPEVVVL--KKHVLVMSFIGDDQVPAP-KLKDAKLNDEEMKNAYYQVLSMM 137 (197)
T ss_pred --------HHHHHHHHHHHHc-----CCCCCeEEEe--cCCEEEEEEcCCCCccch-hhhccccCHHHHHHHHHHHHHHH
Confidence 3578888888764 5789999864 788999999987544321 122222221 222335566677
Q ss_pred HHH-HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 282 RQL-LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 282 ~~l-h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
..+ |..|++|+||+|.||++. +|+++|+|||.+...+..
T Consensus 138 ~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp 177 (197)
T cd05146 138 KQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTHP 177 (197)
T ss_pred HHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCCC
Confidence 766 899999999999999996 688999999999887643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.5e-14 Score=126.28 Aligned_cols=131 Identities=21% Similarity=0.310 Sum_probs=96.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+|++.|..++||+++. +|+.|++|+..++.. ...++..
T Consensus 4 ~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----------------------------------------~~~~~~~ 41 (170)
T cd05151 4 SPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----------------------------------------LLINREN 41 (170)
T ss_pred eecCCcccCceEEEEE--CCeEEEEEeCCCCcc----------------------------------------cccCHHH
Confidence 7899999999999986 488999999765421 0113445
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCc----
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGY---- 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi---- 289 (487)
|+..+..+.+. ..+|+++....+..++||||++|.++.+.. ... .....++..++..+|..++
T Consensus 42 E~~~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~-----~~~--~~~~~~l~~~l~~LH~~~~~~~~ 108 (170)
T cd05151 42 EAENSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTED-----FSD--PENLEKIAKLLKKLHSSPLPDLV 108 (170)
T ss_pred HHHHHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCcccccc-----ccC--HHHHHHHHHHHHHHhCCCCCCce
Confidence 66666655542 136888877666789999999999887530 011 1233566778999999885
Q ss_pred -cccCCCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 290 -FHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 290 -vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
+|+|+||+||+++ +++++++|||.+..-++
T Consensus 109 ~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~ 139 (170)
T cd05151 109 PCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDP 139 (170)
T ss_pred eecCCCCcCcEEEE-CCeEEEEecccccCCCh
Confidence 9999999999998 77899999999886543
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-13 Score=138.66 Aligned_cols=183 Identities=15% Similarity=0.192 Sum_probs=114.5
Q ss_pred cccccccccEEEEEEEccCC-cEEEEEEecCChHH---HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSG-QIVAVKVQRPGIEE---AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g-~~VAVKv~~p~~~~---~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
..||+|+||+||.+....++ ..+|+|+....... .+..+..
T Consensus 24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~----------------------------------- 68 (322)
T KOG1164|consen 24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQ----------------------------------- 68 (322)
T ss_pred eeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHH-----------------------------------
Confidence 78999999999999987553 68999987643111 1111111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCC---CCceEEEeecCCCCcCcHHHHHh---cCCCHHHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYT---SGKVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~---~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~ 283 (487)
.+..+.. ....-.+|.+++... ...++||+.+ |.+|.++..... ........+..|+..+|++
T Consensus 69 -------vl~~l~~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~ 137 (322)
T KOG1164|consen 69 -------VLKKLEK---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALED 137 (322)
T ss_pred -------HHHHHhh---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHH
Confidence 1111111 112335677776552 3469999988 889988754332 2233444556777789999
Q ss_pred HHHCCccccCCCCCCeEEcCC-----CcEEEEecCCCC--CCCHHH----------HHHHHHHHHHHHhcCHHHHHHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPE-----GKLAFLDFGMMS--ETPEEA----------RFAIIGHVVHMVNRDYEAMARDYY 346 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~-----g~i~l~DFGla~--~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 346 (487)
+|+.|++|||+||+|+++... ..+.++|||+++ ...... +..+.|+ ...+....-
T Consensus 138 lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT--------~ry~S~~~H 209 (322)
T KOG1164|consen 138 LHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGT--------LRYASINVH 209 (322)
T ss_pred HHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCc--------cccccHHHh
Confidence 999999999999999999855 359999999999 321111 1111122 222222221
Q ss_pred HcCCCCCCCCcchHHHHHHHHHHH
Q 011399 347 ALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 347 ~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
...-.+..-|+||+.=.+.+++.+
T Consensus 210 ~~~e~~r~DDles~~Y~l~el~~g 233 (322)
T KOG1164|consen 210 LGIEQGRRDDLESLFYMLLELLKG 233 (322)
T ss_pred CCCccCCchhhhhHHHHHHHHhcC
Confidence 222335667999977777777654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.2e-15 Score=164.26 Aligned_cols=127 Identities=9% Similarity=-0.048 Sum_probs=77.6
Q ss_pred CceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEE------------
Q 011399 243 GKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLA------------ 308 (487)
Q Consensus 243 ~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~------------ 308 (487)
..+.+|||+++ +|.+++......++ ....+..++..||.|||++||+||||||+|||++..|.++
T Consensus 54 ~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 54 SIVRALECEDV-SLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred hhhhhhccCCc-cHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 45688898744 88877543222233 4445668899999999999999999999999997655555
Q ss_pred -------EEecCCCCCCCHHHH---HHH---HHHH----HHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 309 -------FLDFGMMSETPEEAR---FAI---IGHV----VHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 309 -------l~DFGla~~l~~~~~---~~~---~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
++|||+++....... ... .+.. .....+.+.++++++...+-.+.++|+||+||.++|++.+
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhC
Confidence 455555443211000 000 0000 0001122223444443334457889999999999999873
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-13 Score=119.76 Aligned_cols=134 Identities=20% Similarity=0.268 Sum_probs=96.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+++|+|+++.||++... +..++||+.++... +.++..
T Consensus 4 ~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-----------------------------------------~~~~~~ 40 (155)
T cd05120 4 KLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-----------------------------------------GADRER 40 (155)
T ss_pred eecccccccceEEEEec--CCeEEEEecCCCCc-----------------------------------------hhHHHH
Confidence 67999999999999984 48899999865421 011334
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCC--CCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC---C
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY---G 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---g 288 (487)
|...+..+.+. ...+|+++.... +..+++|||++|..+... ...........+..++.++|.. |
T Consensus 41 e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~------~~~~~~~~~~~~~~~l~~lh~~~~~~ 109 (155)
T cd05120 41 EVAILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEV------SEEEKEDIAEQLAELLAKLHQLPLLV 109 (155)
T ss_pred HHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccC------CHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 44444555443 344666665433 468999999999888754 1112233456677789999984 7
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
++|+|+||+||++++++.++++|||.+...++.
T Consensus 110 i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~ 142 (155)
T cd05120 110 LCHGDLHPGNILVDDGKILGIIDWEYAGYGPPA 142 (155)
T ss_pred EEecCCCcceEEEECCcEEEEEecccccCCChH
Confidence 999999999999999899999999999876543
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.5e-13 Score=129.76 Aligned_cols=148 Identities=18% Similarity=0.213 Sum_probs=95.8
Q ss_pred cccc-cccccEEEEEEEccCCcEEEEEEecC-ChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIA-AASLGQVYKAQLKYSGQIVAVKVQRP-GIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig-~Gs~gqV~~a~~~~~g~~VAVKv~~p-~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
..|| .|+.|.||.+.. +|..++||.... +....+..+ ++.-.....-.+
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~---------------------------~~~~~~~~~~r~ 87 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKD---------------------------RYLFTGLERTRA 87 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhh---------------------------cccccchhhhHH
Confidence 4687 899999999987 488999998753 211111000 000000111124
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecC---CC---CceEEEeecCC-CCcCcHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDY---TS---GKVLTMEWVEG-VKLNEQVAIESQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~---~~---~~~LvmE~~~G-~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 284 (487)
.+|...+.++.+ ..+.+|.++... .. ..++||||++| .+|.++.. ....+.. ...++..++.++
T Consensus 88 ~rE~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~--~~~l~~~--~~~~i~~~l~~l 158 (239)
T PRK01723 88 FAEFRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQ--EAPLSEE--QWQAIGQLIARF 158 (239)
T ss_pred HHHHHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHh--cCCCCHH--HHHHHHHHHHHH
Confidence 455556666643 234556554321 11 23599999998 57776632 2233332 235677899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCC
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~ 319 (487)
|..||+|+|+||+|||+++++.++|+|||.+..-.
T Consensus 159 H~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 159 HDAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT 193 (239)
T ss_pred HHCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence 99999999999999999999999999999988754
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-13 Score=125.99 Aligned_cols=174 Identities=22% Similarity=0.258 Sum_probs=100.2
Q ss_pred EEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhh---cc-cCCHHHHHHHHHHHHHHHhcHHHHHHHH
Q 011399 143 QVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVD---II-TTDVVALIDEFASRVYQELNYVQEGQNA 218 (487)
Q Consensus 143 qV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~---~~-~~~i~~~~~~~~~~l~~Eld~~~Ea~~~ 218 (487)
.||.|... +|..||||+-+.+...- +........-.. .. +.+...+.. ....+|++++
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~F--------k~~~~y~~~~~r~~~~~~~~~~~~~~~---------~~~~~E~~~L 62 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSF--------KRRKKYRDYDYRFKKYRHKSSWRYLIR---------EWAKKEFRNL 62 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS---------HHHHHTTTSTTSTTC--G--CHHHHH---------HHHHHHHHHH
T ss_pred CEEEEECC-CCCEEEEEEeccCceEE--------EEeeeeecccchhcccccccCHHHHHH---------HHHHHHHHHH
Confidence 48999986 89999999998663221 111111111110 00 112222222 2345577777
Q ss_pred HHHHHHhCCCCCeEeceeeecCCCCceEEEeecC--CCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 011399 219 RRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVE--GVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHP 296 (487)
Q Consensus 219 ~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~--G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp 296 (487)
.++.. ..+.+|+++.- +..+|||||++ |..+..+............++...+......+|..|++|+|+++
T Consensus 63 ~~l~~-----~Gv~vP~p~~~--~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~ 135 (188)
T PF01163_consen 63 KRLYE-----AGVPVPKPYDY--NRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSE 135 (188)
T ss_dssp HHCCC-----TT-SS--EEEE--ETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-ST
T ss_pred HHHHH-----CCccCCcEEEE--eCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCCh
Confidence 76643 45789999854 67899999999 88887764433223455566665555566678999999999999
Q ss_pred CCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 011399 297 GNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349 (487)
Q Consensus 297 ~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (487)
.||+++++ ++.+||||.+........ ..+..+|.+.+...+-..|
T Consensus 136 ~NIlv~~~-~~~iIDf~qav~~~~p~a-------~~~l~RDi~ni~~fF~~~~ 180 (188)
T PF01163_consen 136 YNILVDDG-KVYIIDFGQAVDSSHPNA-------EELLRRDIENIIRFFKKKG 180 (188)
T ss_dssp TSEEEETT-CEEE--GTTEEETTSTTH-------HHHHHHHHHHHHHHHHCCC
T ss_pred hhEEeecc-eEEEEecCcceecCCccH-------HHHHHHHHHHHHHHHHHhC
Confidence 99999776 999999999887654321 1344456666555554444
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.8e-13 Score=149.75 Aligned_cols=140 Identities=19% Similarity=0.281 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.+|.|++|+||+|... +|+.||+|+.+|...=.+-.-.+++.++. ....+.+..
T Consensus 704 ~e~G~g~y~~vy~a~~~-~~~~~alK~e~P~~~WEfYI~~q~~~RLk-------~~~~~~~~~----------------- 758 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHS-NGKLVALKVEKPPNPWEFYICLQVMERLK-------PQMLPSIMH----------------- 758 (974)
T ss_pred eeeccccceEEEEeecC-CCcEEEEEeecCCCceeeeehHHHHHhhc-------hhhhcchHH-----------------
Confidence 56999999999999998 69999999999863322211112222221 000011111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+...+ -+.+..+||+||.+-|+|-++.... .......-.+..+++..++++|..||||+
T Consensus 759 -------~~~a~-------------~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHg 818 (974)
T KOG1166|consen 759 -------ISSAH-------------VFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHG 818 (974)
T ss_pred -------HHHHH-------------ccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecc
Confidence 11111 1246678999999999999985511 11222334455677779999999999999
Q ss_pred CCCCCCeEEcC-------CCcEEEEecCCCCCC
Q 011399 293 DPHPGNLLATP-------EGKLAFLDFGMMSET 318 (487)
Q Consensus 293 Dlkp~Nili~~-------~g~i~l~DFGla~~l 318 (487)
||||.|+|+.. .-.++|||||.+-.+
T Consensus 819 DiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 819 DIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred cCCcceeEeecccCCCCcccceEEEecccceee
Confidence 99999999972 124999999987654
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.9e-12 Score=114.93 Aligned_cols=140 Identities=19% Similarity=0.282 Sum_probs=100.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
.++++|+-+.++.+... |.++++|..-|..-+ ||.+.+-+.- | .-.+
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR-----------------------~p~LD~klrr-------~-Rt~~ 48 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYR-----------------------HPELDEKLRR-------E-RTRR 48 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccC-----------------------ChHHHHHHHH-------H-HHHH
Confidence 46889999999999774 667888987655322 3322221111 1 1356
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
||+.+.+.+.. .|.+|.+|.-......|+|||++|..|.+..... ..+ +..-+-..+.-||..||+|+|
T Consensus 49 Earil~~a~~~-----GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~--~~~----~~r~vG~~vg~lH~~givHGD 117 (204)
T COG3642 49 EARILAKAREA-----GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA--RPD----LLREVGRLVGKLHKAGIVHGD 117 (204)
T ss_pred HHHHHHHHHHc-----CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc--chH----HHHHHHHHHHHHHhcCeecCC
Confidence 77777777654 6889999998888889999999999888763322 111 223344456779999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l 318 (487)
|.+.||+++. +++.+||||++..-
T Consensus 118 LTtsNiIl~~-~~i~~IDfGLg~~s 141 (204)
T COG3642 118 LTTSNIILSG-GRIYFIDFGLGEFS 141 (204)
T ss_pred CccceEEEeC-CcEEEEECCccccc
Confidence 9999999965 44999999998753
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.6e-14 Score=149.20 Aligned_cols=267 Identities=16% Similarity=0.101 Sum_probs=153.7
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEec----CChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQR----PGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~----p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
...+|+|++|.|+.+......+..+.|..+ +.... ...-..+......-..+.|+++.+.++.+.+.
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~-----~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~---- 393 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESE-----RKYNYNITSEFCIGSSLSHPNIIETLDIVQEI---- 393 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccH-----HHHhhhhhhheeecccccCCchhhhHHHHhhc----
Confidence 367999999988888877566666666544 22111 11111122222222334577766555543322
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
....-+||||++ +|....... ............|+..+++|+|..
T Consensus 394 ---------------------------------~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~ 439 (601)
T KOG0590|consen 394 ---------------------------------DGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM 439 (601)
T ss_pred ---------------------------------ccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc
Confidence 111123999999 887764433 455566778889999999999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA-LDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~Di~sl~~~l~~ 366 (487)
|+-|||+||+|++++.+|.+|++|||.+....-....... ........+|. ++++.+. ..|...-+|+||.+.++..
T Consensus 440 GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~-~~~g~~gS~pY-~apE~~~~~~ydpr~vDiwS~~ii~~~ 517 (601)
T KOG0590|consen 440 GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH-ESSGIVGSDPY-LAPEVLTGKEYDPRAVDVWSCGIIYIC 517 (601)
T ss_pred CceeccCccccEEEecCCceEEeecCcceeeccCcchhhh-hhcCcccCCcC-cCcccccccccCcchhhhhhccceEEE
Confidence 9999999999999999999999999988755322111100 01111222222 2233332 3344455788888776655
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
|..+-+. |..... --+.+ ... ... -.+++... ...+......+.
T Consensus 518 m~~~~~~------------Wk~a~~-------~~~~~----~~~-------~~~-~~~~~~~~-----~~~~~~~lp~~~ 561 (601)
T KOG0590|consen 518 MILGRFP------------WKVAKK-------SDNSF----KTN-------NYS-DQRNIFEG-----PNRLLSLLPRET 561 (601)
T ss_pred EecCCCc------------cccccc-------cccch----hhh-------ccc-cccccccC-----hHHHHHhchhhH
Confidence 5442111 111000 00000 000 000 11122111 122333445678
Q ss_pred HHHHHHHHhhcCcccccccchhhccccc-cccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVD-FEFVVC 480 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~-~~~~~~ 480 (487)
|..+.++|..||.+|.+..+.+.-+||. ++-+.+
T Consensus 562 ~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c~v 596 (601)
T KOG0590|consen 562 RIIIYRMLQLDPTKRITIEQILNDEWIRSIECCHV 596 (601)
T ss_pred HHHHHHHccCChhheecHHHHhhChHhhhcceEEe
Confidence 8999999999999999999999999993 443333
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.7e-13 Score=129.64 Aligned_cols=167 Identities=19% Similarity=0.216 Sum_probs=104.2
Q ss_pred cccccccccEEEEEEEccCCc-----------------------------------EEEEEEecCChHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ-----------------------------------IVAVKVQRPGIEEAIGLDFYLIRG 178 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~-----------------------------------~VAVKv~~p~~~~~~~~dl~~l~~ 178 (487)
++||+|.-+.||.|+...+|. +.|||..-. +... ..|..+++.
T Consensus 163 ~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN-~~~~-s~~~~iL~s 240 (598)
T KOG4158|consen 163 EFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFN-FEHD-SGDAHILKS 240 (598)
T ss_pred chhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcc-cccC-CchHHHHHH
Confidence 689999999999998864321 234443321 1111 346667776
Q ss_pred HHHHHh----------------hhhh------cccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEecee
Q 011399 179 VGFLIN----------------KYVD------IITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDI 236 (487)
Q Consensus 179 ~~~~~~----------------~~~~------~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v 236 (487)
+...+- +..+ ..||||+.+...|.+++. ++.--...| +..---..
T Consensus 241 M~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~----------~lPda~~~Y---Pdalp~R~ 307 (598)
T KOG4158|consen 241 MGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVK----------VLPDAIERY---PDALPARW 307 (598)
T ss_pred hhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhc----------cCCchhhhC---ccccccee
Confidence 665431 1111 258999999888766532 221111111 11111111
Q ss_pred eec---CCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEc--CCC--cEEE
Q 011399 237 FWD---YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLAT--PEG--KLAF 309 (487)
Q Consensus 237 ~~~---~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~--~~g--~i~l 309 (487)
+.+ .....|+||...+. +|.++...+..+.....++..|+..++.|+|.+|+-|||+|..|||+. +|+ .+++
T Consensus 308 ~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVv 386 (598)
T KOG4158|consen 308 YPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVV 386 (598)
T ss_pred cccccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEE
Confidence 221 12346899988765 676665444444555667778888999999999999999999999986 444 4899
Q ss_pred EecCCCC
Q 011399 310 LDFGMMS 316 (487)
Q Consensus 310 ~DFGla~ 316 (487)
+|||++-
T Consensus 387 aDFGCcL 393 (598)
T KOG4158|consen 387 ADFGCCL 393 (598)
T ss_pred cccceee
Confidence 9999874
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.8e-13 Score=130.14 Aligned_cols=191 Identities=20% Similarity=0.236 Sum_probs=118.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..+|.|+||.||++.+. ..+++|.+.+...... ..... +.+
T Consensus 6 ~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~------------------------------~~~~~------~~~ 46 (384)
T COG0515 6 RKLGEGSFGEVYLARDR---KLVALKVLAKKLESKS------------------------------KEVER------FLR 46 (384)
T ss_pred EeecCCCCeEEEEEEec---cEEEEEeechhhccch------------------------------hHHHH------HHH
Confidence 57899999999999986 8899999875432211 00011 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec--CCCCceEEEeecCCCCcCcHHHHH----hcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGVKLNEQVAIE----SQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
|..-. ..+...+ .+...+.. .....+++|+++.|+.+.+..... .........+..++..++.++|..
T Consensus 47 e~~~~----~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~ 120 (384)
T COG0515 47 EIQIL----ASLNHPP--NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120 (384)
T ss_pred HHHHH----HHccCCc--ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22211 1111121 12222221 122258999999999998553332 122334455667788889999999
Q ss_pred CccccCCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHH-----HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 288 GYFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARF-----AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
|++|||+||.||+++..+ .++++|||++..+...... ..........+..|+.+.... .+......|+|++|
T Consensus 121 ~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~--~~~~~~~~D~~s~g 198 (384)
T COG0515 121 GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS--LAYASSSSDIWSLG 198 (384)
T ss_pred CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCC--CCCCCchHhHHHHH
Confidence 999999999999999988 7999999999865443211 112222233344444331100 14667889999999
Q ss_pred HHHHHHHHHh
Q 011399 362 PALRNFFDDA 371 (487)
Q Consensus 362 ~~l~~~~~~~ 371 (487)
+.+++++...
T Consensus 199 ~~~~~~~~~~ 208 (384)
T COG0515 199 ITLYELLTGL 208 (384)
T ss_pred HHHHHHHhCC
Confidence 8888866644
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.7e-11 Score=111.70 Aligned_cols=80 Identities=33% Similarity=0.561 Sum_probs=60.9
Q ss_pred eEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEE
Q 011399 231 VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFL 310 (487)
Q Consensus 231 v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~ 310 (487)
+..-+-.+.+++..+|+|||++|..|.+..... . -....+..++.++|..|++|+||||||+++++ +.++++
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~-----e--~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-~~i~iI 176 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID-----E--DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-NGIRII 176 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchhcC-----H--HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-CcEEEE
Confidence 334444556778889999999999998864322 1 12234556799999999999999999999974 559999
Q ss_pred ecCCCCCC
Q 011399 311 DFGMMSET 318 (487)
Q Consensus 311 DFGla~~l 318 (487)
||+..+..
T Consensus 177 D~~~k~~~ 184 (229)
T PF06176_consen 177 DTQGKRMS 184 (229)
T ss_pred ECcccccc
Confidence 99987754
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.8e-13 Score=127.06 Aligned_cols=243 Identities=16% Similarity=0.151 Sum_probs=119.9
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
..+||.|+++.||.+++..+|+++|||+..-.. +....+++.+++-.-....+... .|...
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~--~~p~~---------------- 77 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGV--KNPKE---------------- 77 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT----SHHH----------------
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccC--CCHHH----------------
Confidence 368999999999999999999999999986333 33333444444333222111100 11111
Q ss_pred HHHHHHHHHHHHhCCCCCeEece---eeecCC-------CCceEEEeecCCCCcCcHHHH-Hhc-CC-CHH-----HHHH
Q 011399 213 QEGQNARRFKKLYADKEDVLVPD---IFWDYT-------SGKVLTMEWVEGVKLNEQVAI-ESQ-GL-KVL-----DLVN 274 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~---v~~~~~-------~~~~LvmE~~~G~~L~~~~~~-~~~-~~-~~~-----~~~~ 274 (487)
|....+|.- ...-+.++. .+..-. -..++.|.-+.+ +|.++... ... .. ... ..+.
T Consensus 78 --a~~~~r~l~---P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT 151 (288)
T PF14531_consen 78 --AYRHLRFLV---PLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLT 151 (288)
T ss_dssp --HHHHH-B------SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHH
T ss_pred --HHHhceEEe---eeEEEEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHH
Confidence 111111111 111122221 010000 133677877755 66655331 111 11 111 2223
Q ss_pred HHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH--H-HcCCC
Q 011399 275 TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDY--Y-ALDFL 351 (487)
Q Consensus 275 ~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~g~~ 351 (487)
.|+...++++|..|++|+|++|.|++++++|.+.|.||+.+...+..... . ........|+...... . ..-.+
T Consensus 152 ~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~---~-~~~~~~~PPe~~~~~~~~~~~~~~~ 227 (288)
T PF14531_consen 152 VQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC---S-EFPVAFTPPELESCAGQFGQNNAPY 227 (288)
T ss_dssp HHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG---G-GS-TTTS-HHHHHHHTSCHHSEEEE
T ss_pred HHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec---c-CCCcccCChhhhhhhcccCccccee
Confidence 55566889999999999999999999999999999999987765543221 0 0012233344322210 0 01123
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 011399 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (487)
+.+.|.|++|+.++.++...++....... ..... ...... .+|..+..+++.+
T Consensus 228 t~~~DaW~LG~~ly~lWC~~lPf~~~~~~--~~~~~---~f~~C~-~~Pe~v~~LI~~l 280 (288)
T PF14531_consen 228 TFATDAWQLGITLYSLWCGRLPFGLSSPE--ADPEW---DFSRCR-DMPEPVQFLIRGL 280 (288)
T ss_dssp -HHHHHHHHHHHHHHHHHSS-STCCCGGG--STSGG---GGTTSS----HHHHHHHHHH
T ss_pred eeccCHHHHHHHHHHHHHccCCCCCCCcc--ccccc---cchhcC-CcCHHHHHHHHHH
Confidence 56779999999999999865433322111 11100 112223 6777777777666
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-10 Score=108.81 Aligned_cols=185 Identities=21% Similarity=0.241 Sum_probs=116.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
-+|.+|--+.||+|... ++..||||+.+.....--..+-.+.. -.++.. ...|..+++..+. ..
T Consensus 54 g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~g-----d~Rf~~-~~~~rr~lv~~W~---------~k 117 (268)
T COG1718 54 GCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQG-----DPRFRN-SRSNRRKLVFAWA---------RK 117 (268)
T ss_pred eeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhc-----Chhhhc-CCCCHHHHHHHHH---------HH
Confidence 37889999999999975 89999999998654332111100000 011111 1235666665554 45
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC---HHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK---VLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~---~~~~~~~~i~~~l~~lh~~giv 290 (487)
|-+|+.++.+ .+|.+|+++.- ...+|||||+... -.-...+...+.. ...++...+...-......|++
T Consensus 118 Ef~NL~R~~e-----AGVrvP~Pi~~--~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LV 189 (268)
T COG1718 118 EFRNLKRAYE-----AGVRVPEPIAF--RNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLV 189 (268)
T ss_pred HHHHHHHHHH-----cCCCCCCceee--cCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcc
Confidence 7788888775 35889998864 5679999999654 1111112222211 2233333333333444559999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF 350 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (487)
|+|+..=|||+. +|.+.+||||.+..+.... ...+..+|...+...+...|+
T Consensus 190 HgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~-------a~e~L~RDv~Ni~~fF~r~gv 241 (268)
T COG1718 190 HGDLSEYNILVH-DGEPYIIDVSQAVTIDHPN-------AFEFLERDVRNIARFFRRKGV 241 (268)
T ss_pred cccchhhheEEE-CCeEEEEECccccccCCCc-------hHHHHHHHHHHHHHHHHHcCC
Confidence 999999999997 8999999999998876432 224556677777666655543
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.5e-11 Score=110.87 Aligned_cols=159 Identities=22% Similarity=0.229 Sum_probs=105.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||-|--|.||.|... .|.++|||.-|-+... + +.+.+.........|.++..+-. ....+
T Consensus 97 ~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~Grts-F-------rkvk~~R~y~~~~~h~sWl~~sR---l~A~r------ 158 (304)
T COG0478 97 TKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTS-F-------RKVKRNRDYLADKEHGSWLYVSR---LAAER------ 158 (304)
T ss_pred cccccCccceEEEEECC-CCCEEEEEEeecCchh-h-------hhhcchhhhhccccCcchhhhHH---HHHHH------
Confidence 67999999999999987 8999999999877322 1 22222111111222433222211 12222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|-..+.++.. ..+.||+++.. +.+++||||++|..|....- ...+...++...+ ..+.-+-+.|++|+|
T Consensus 159 Ef~~L~~L~~-----~G~~VP~P~~~--nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il-~~~~~~~~~GiVHGD 227 (304)
T COG0478 159 EFEALQRLYP-----EGVKVPKPIAW--NRHAVVMEYIEGVELYRLRL---DVENPDEILDKIL-EEVRKAYRRGIVHGD 227 (304)
T ss_pred HHHHHHHhhh-----cCCCCCCcccc--ccceeeeehcccceeecccC---cccCHHHHHHHHH-HHHHHHHHcCccccC
Confidence 3333444432 34678998865 78899999999988876531 2234444444433 334444599999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
+.+=||++++||.+.++||-.+...+..
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v~~~hp 255 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAVPISHP 255 (304)
T ss_pred CchheEEEecCCCEEEEeCcccccCCCC
Confidence 9999999999999999999988877544
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.7e-11 Score=104.71 Aligned_cols=147 Identities=17% Similarity=0.232 Sum_probs=103.7
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
-+++-+|+-|.|+++.. +|+...||...+..- +||-+..-+.- . .-.
T Consensus 12 l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~Y-----------------------RHP~LD~kLtr--~------Rt~ 58 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSF--SGEAAIIKERFSKRY-----------------------RHPALDQKLTR--K------RTK 58 (229)
T ss_pred ceeeeccceeeEeeecc--CCceeEEeecccccc-----------------------cchHHHHHHHH--H------HHH
Confidence 47899999999999998 699999998765422 24333222211 1 135
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCC-CCcCcHHHHHhcC--CCHH-HHHHHHHHHHHHHHHHCC
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEG-VKLNEQVAIESQG--LKVL-DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G-~~L~~~~~~~~~~--~~~~-~~~~~~i~~~l~~lh~~g 288 (487)
+|++.+.+++.. .+.+|.++.--.....|.|||++| .++.++....-.. .+.. .-....+-..+.-||..+
T Consensus 59 ~Ear~l~k~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd 133 (229)
T KOG3087|consen 59 QEARLLAKCRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND 133 (229)
T ss_pred HHHHHHHHHHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC
Confidence 677777777764 688999998777778899999999 3445543322211 2222 233455666788999999
Q ss_pred ccccCCCCCCeEEcCCCc---EEEEecCCCCC
Q 011399 289 YFHADPHPGNLLATPEGK---LAFLDFGMMSE 317 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~---i~l~DFGla~~ 317 (487)
++|+|+..+||++.++|. +.++|||++..
T Consensus 134 iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 134 IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eecccccccceEEecCCCcCceEEEeecchhc
Confidence 999999999999987763 58999998753
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.5e-11 Score=110.00 Aligned_cols=166 Identities=18% Similarity=0.123 Sum_probs=100.1
Q ss_pred CCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHH
Q 011399 254 VKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 331 (487)
Q Consensus 254 ~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~ 331 (487)
|+|.++......+++. ...+..++..||.|+|+.| ||+|||++.++.+++ ||++........
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~-------- 64 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQS-------- 64 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccC--------
Confidence 3555554432333444 3445578888999999999 999999999999999 999887654321
Q ss_pred HHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 011399 332 HMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (487)
Q Consensus 332 ~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (487)
.+++..++++....+-.++++|+||+|+.+++++++.. |+.... ....+..+..
T Consensus 65 ---~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~--p~~~~~~~~~~~~~~~~-------------------- 119 (176)
T smart00750 65 ---RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYEL--PYNEERELSAILEILLN-------------------- 119 (176)
T ss_pred ---CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCC--CccccchhcHHHHHHHH--------------------
Confidence 12233444444444556789999999999999997432 322111 1111111110
Q ss_pred HHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 411 TVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 411 ~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+. ...+|..+.. + ... ...+.+++.+..||..||..|.+..+-+.|.++.
T Consensus 120 ----~~-~~~~~~~~~~----~---~~~--~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 120 ----GM-PADDPRDRSN----L---ESV--SAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred ----Hh-ccCCcccccc----H---HHH--HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 00 0111110000 0 000 0014678899999999999999988888877653
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.2e-11 Score=131.46 Aligned_cols=92 Identities=23% Similarity=0.227 Sum_probs=65.8
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH----HHHH----HHHHHH-HHHhcCHHHHHHHHHHc
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE----ARFA----IIGHVV-HMVNRDYEAMARDYYAL 348 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~----~~~~----~~~~~~-~~~~~~~~~~~~~~~~~ 348 (487)
..+++|+|+.||+|||+||.|++|+.-|++|+.|||+++..-.. .... ...-+. --+.+.|+++++++.-.
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr 232 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR 232 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh
Confidence 46899999999999999999999999999999999998753211 1111 111111 12345667776666544
Q ss_pred CCCCCCCCcchHHHHHHHHHH
Q 011399 349 DFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 349 g~~~~~~Di~sl~~~l~~~~~ 369 (487)
.-++..+|.|++|..+++|+-
T Consensus 233 qgygkpvdwwamGiIlyeFLV 253 (1205)
T KOG0606|consen 233 QGYGKPVDWWAMGIILYEFLV 253 (1205)
T ss_pred hccCCCccHHHHHHHHHHHhe
Confidence 444788999999999998874
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.3e-12 Score=137.87 Aligned_cols=102 Identities=18% Similarity=0.172 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCC--CCHHHHHHHHHHHHH----HHhcCHHHHH
Q 011399 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE--TPEEARFAIIGHVVH----MVNRDYEAMA 342 (487)
Q Consensus 269 ~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~--l~~~~~~~~~~~~~~----~~~~~~~~~~ 342 (487)
+++.++.|+..|+.++|..||+|+|||.+||||+.-+=+.|.||..-+. ++++....+.-++-+ ..+-.||...
T Consensus 121 EKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv 200 (1431)
T KOG1240|consen 121 EKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFV 200 (1431)
T ss_pred HHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhh
Confidence 4567888999999999999999999999999999999999999987764 233222111111000 1122344433
Q ss_pred HHH------HHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 343 RDY------YALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 343 ~~~------~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
... ..-+...|+.||.|+||.+.|++..
T Consensus 201 ~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~E 234 (1431)
T KOG1240|consen 201 SALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLE 234 (1431)
T ss_pred ccccccccCCcccccChhhhhhhhhHHHHHHHhc
Confidence 211 1122357889999999999999873
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-11 Score=127.75 Aligned_cols=162 Identities=16% Similarity=0.139 Sum_probs=113.7
Q ss_pred CCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCc
Q 011399 228 KEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGK 306 (487)
Q Consensus 228 ~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~ 306 (487)
.+.+.-+....+..++.+++++|..|+.+....... .........+...+..+++++|..|++|+|+|+.||+++.+|.
T Consensus 56 ~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Gh 135 (612)
T KOG0603|consen 56 TPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGH 135 (612)
T ss_pred CCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCc
Confidence 445555555566678889999999998886432111 1112233445556667999999999999999999999999999
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHH
Q 011399 307 LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVD 386 (487)
Q Consensus 307 i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~ 386 (487)
+++.|||+++..-+.... .++++++++++.. |. ....|.||+|..+.+++++.. ++..
T Consensus 136 i~~tdfglske~v~~~~~----------cgt~eymApEI~~-gh-~~a~D~ws~gvl~felltg~~--pf~~-------- 193 (612)
T KOG0603|consen 136 IKLTDFGLSKEAVKEKIA----------CGTYEYRAPEIIN-GH-LSAADWWSFGVLAFELLTGTL--PFGG-------- 193 (612)
T ss_pred cccCCchhhhHhHhhhhc----------ccchhhhhhHhhh-cc-CCcccchhhhhhHHHHhhCCC--CCch--------
Confidence 999999999876554432 4457777777776 43 567899999999999998543 2222
Q ss_pred HHHHHHhhCCCCCChHHHHHHHHHH
Q 011399 387 GLGAVLYQYPFNVPAYYALILRSLT 411 (487)
Q Consensus 387 ~l~~~~~~~~~~~p~~~~~l~r~l~ 411 (487)
.+...+-...+.+|.++....+++.
T Consensus 194 ~~~~~Il~~~~~~p~~l~~~a~~~~ 218 (612)
T KOG0603|consen 194 DTMKRILKAELEMPRELSAEARSLF 218 (612)
T ss_pred HHHHHHhhhccCCchhhhHHHHHHH
Confidence 2222333335567888777777663
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.4e-10 Score=109.08 Aligned_cols=144 Identities=20% Similarity=0.244 Sum_probs=88.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++++.|..+.||+++.. +|+.+++|+.+++.... ...++..
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~--------------------------------------~~~~~~~ 44 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLP--------------------------------------SAHDVAR 44 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCc--------------------------------------ccccHHH
Confidence 78999999999999986 57899999976431100 0012344
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCC-----CceEEEeecCCCCcCcHHH----------------------HHhcC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTS-----GKVLTMEWVEGVKLNEQVA----------------------IESQG 266 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~-----~~~LvmE~~~G~~L~~~~~----------------------~~~~~ 266 (487)
|+..+..+.+. .+.+|+++..... ..+++|||++|.++.+... ++...
T Consensus 45 E~~~~~~l~~~-----~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 119 (223)
T cd05154 45 EYRVLRALAGT-----GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVD 119 (223)
T ss_pred HHHHHHHhhCC-----CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 55555555432 4567877654433 4589999999988765320 01000
Q ss_pred CC-------------HHHHHHH--------------HHHHHHHHHH-------HCCccccCCCCCCeEEcC--CCcEEEE
Q 011399 267 LK-------------VLDLVNT--------------GIQCSLRQLL-------EYGYFHADPHPGNLLATP--EGKLAFL 310 (487)
Q Consensus 267 ~~-------------~~~~~~~--------------~i~~~l~~lh-------~~givH~Dlkp~Nili~~--~g~i~l~ 310 (487)
.. ....+.. .+...++.+. ...++|+|+||+||++++ ++.+.|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iI 199 (223)
T cd05154 120 PAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVL 199 (223)
T ss_pred hhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEE
Confidence 00 0000000 0011122221 357899999999999998 5678999
Q ss_pred ecCCCCCCCHH
Q 011399 311 DFGMMSETPEE 321 (487)
Q Consensus 311 DFGla~~l~~~ 321 (487)
||+.++.-++.
T Consensus 200 D~e~~~~g~~~ 210 (223)
T cd05154 200 DWELATLGDPL 210 (223)
T ss_pred eccccccCChH
Confidence 99998865543
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.1e-09 Score=104.06 Aligned_cols=102 Identities=16% Similarity=0.102 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEecee--eecC-----CCCceEEEeecCCC-CcCcHHHHH-hcC--CCHHHHHHHHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDI--FWDY-----TSGKVLTMEWVEGV-KLNEQVAIE-SQG--LKVLDLVNTGIQC 279 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v--~~~~-----~~~~~LvmE~~~G~-~L~~~~~~~-~~~--~~~~~~~~~~i~~ 279 (487)
+.+|.+++.++.+. .|.+|.+ +.+. ....+||||+++|. +|.++.... ... ......+...+..
T Consensus 75 a~rE~~~l~~L~~~-----GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~ 149 (268)
T PRK15123 75 ADREWRAIHRLHEV-----GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVAT 149 (268)
T ss_pred HHHHHHHHHHHHHc-----CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence 45667777777654 5667766 4321 23478999999986 677764311 111 1233345566778
Q ss_pred HHHHHHHCCccccCCCCCCeEEcC-------CCcEEEEecCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATP-------EGKLAFLDFGMMSE 317 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~-------~g~i~l~DFGla~~ 317 (487)
.+..||..|++|+|++|+|||++. ++.+.+|||+.+..
T Consensus 150 ~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 150 MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 899999999999999999999975 46799999998853
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.6e-10 Score=108.75 Aligned_cols=158 Identities=15% Similarity=0.111 Sum_probs=99.9
Q ss_pred ceEEEeecCCCCcCcHHHHHh-------cCCCHHH--HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCC
Q 011399 244 KVLTMEWVEGVKLNEQVAIES-------QGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314 (487)
Q Consensus 244 ~~LvmE~~~G~~L~~~~~~~~-------~~~~~~~--~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGl 314 (487)
.+....+..-|+|..+..+-+ +.....+ .+..|+.+|+.|+|++|++|.||-..|.+|++.-++||+|=.+
T Consensus 363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaL 442 (563)
T KOG1024|consen 363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSAL 442 (563)
T ss_pred ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchh
Confidence 344556665667776655322 1123333 3457788899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHH-HHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHh
Q 011399 315 MSETPEEARFAIIGHVV-HMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLY 393 (487)
Q Consensus 315 a~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 393 (487)
++.+=+.....+.+.-. -+-...+|.+....+ +...|+||||..++|+++- ...|..+++-.+.-.-+....+
T Consensus 443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n~~y-----ssasDvWsfGVllWELmtl-g~~PyaeIDPfEm~~ylkdGyR 516 (563)
T KOG1024|consen 443 SRDLFPGDYHCLGDNENRPVKWMSLEALQNSHY-----SSASDVWSFGVLLWELMTL-GKLPYAEIDPFEMEHYLKDGYR 516 (563)
T ss_pred ccccCcccccccCCCCCCcccccCHHHHhhhhh-----cchhhhHHHHHHHHHHHhc-CCCCccccCHHHHHHHHhccce
Confidence 99875443221111000 011123444544444 7889999999999999973 2345555554332222222111
Q ss_pred -hCCCCCChHHHHHH
Q 011399 394 -QYPFNVPAYYALIL 407 (487)
Q Consensus 394 -~~~~~~p~~~~~l~ 407 (487)
..|+..|.++..++
T Consensus 517 laQP~NCPDeLf~vM 531 (563)
T KOG1024|consen 517 LAQPFNCPDELFTVM 531 (563)
T ss_pred ecCCCCCcHHHHHHH
Confidence 45888998865443
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.9e-10 Score=114.23 Aligned_cols=119 Identities=18% Similarity=0.243 Sum_probs=90.9
Q ss_pred CceEEEeecCCCCcCcHHHHHhcCC----CHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 243 GKVLTMEWVEGVKLNEQVAIESQGL----KVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 243 ~~~LvmE~~~G~~L~~~~~~~~~~~----~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
..++.|++|+-.+|.+++..+..+. ........++.-+++| .|.+|+|+||.||+...++.++|.|||++...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 3579999999999999865333332 2233344555557777 99999999999999999999999999999877
Q ss_pred CHHH-----HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 319 PEEA-----RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 319 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
.... ......-+.+.+|.+||.+...-| +.++||++||..++|++.
T Consensus 407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y-----~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 407 DKDETVAPAAASHTQQVGTLLYMSPEQIRGQQY-----SEKVDIYALGLILAELLI 457 (516)
T ss_pred ccCCcccchhhhhhhcccccccCCHHHHhhhhh-----hhhcchhhHHHHHHHHHH
Confidence 5443 222344455678889999875555 889999999999999886
|
|
| >KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.8e-07 Score=91.62 Aligned_cols=226 Identities=19% Similarity=0.265 Sum_probs=130.7
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhh-cccCCHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVD-IITTDVVALIDEFASRVY 206 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~-~~~~~i~~~~~~~~~~l~ 206 (487)
+.+++ -+|..|--+.||.|+.. +|..+|||+.+..+.---.+|-. +.... ++.. .-..|+..++..+.+.
T Consensus 145 i~~in-GCiSTGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRY----V~GEf-RFRhgyck~NPRKMVk~WAEK-- 215 (520)
T KOG2270|consen 145 IVEIN-GCISTGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRY----VSGEF-RFRHGYCKHNPRKMVKTWAEK-- 215 (520)
T ss_pred eeecc-cccccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhh----cccee-eeecccccCCcHHHHHHHHHH--
Confidence 34443 57888999999999987 99999999987554322122211 00000 0111 1134788888877654
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC---HHHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK---VLDLVNTGIQCSLRQ 283 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~---~~~~~~~~i~~~l~~ 283 (487)
|.+|+.|+... .|.+|+++. -..++|||+|+.+.... ...++...+. ...++...+...-..
T Consensus 216 -------E~RNLkRl~~a-----GIP~PePIl--Lk~hVLVM~FlGrdgw~-aPkLKd~~ls~~ka~~~Y~~~v~~MR~l 280 (520)
T KOG2270|consen 216 -------EMRNLKRLNNA-----GIPCPEPIL--LKNHVLVMEFLGRDGWA-APKLKDASLSTSKARELYQQCVRIMRRL 280 (520)
T ss_pred -------HHHHHHHHHhc-----CCCCCCcee--eecceEeeeeccCCCCc-CcccccccCChHHHHHHHHHHHHHHHHH
Confidence 78888888753 466666653 46789999999643221 1112222232 122333333222334
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
-+..++||+||.-=|+|+ .+|.+.+||-+.+...+......|. ..|...+..-+..+|+..-.
T Consensus 281 Y~~c~LVHADLSEfN~Ly-hdG~lyiIDVSQSVE~DHP~aldFL-------RmDc~NVn~FF~r~gv~v~t--------- 343 (520)
T KOG2270|consen 281 YQKCRLVHADLSEFNLLY-HDGKLYIIDVSQSVEHDHPHALDFL-------RMDCNNVNDFFRRLGVAVMT--------- 343 (520)
T ss_pred HHHhceeccchhhhhheE-ECCEEEEEEccccccCCChhHHHHH-------HHHHHHHHHHHHHcCCeeec---------
Confidence 467899999999999999 8899999999998877654332222 22333344444445532111
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhh
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQ 394 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 394 (487)
+.++|.-..+......++...+..+..+...
T Consensus 344 ~r~LFefI~d~~i~~~nmd~~l~~l~~~~~~ 374 (520)
T KOG2270|consen 344 VRELFEFITDPTITLENMDAYLEELKAIIIS 374 (520)
T ss_pred HHHHHHHhhccccchhhHHHHHHHHHHHHhc
Confidence 2333333334455555555556555554443
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.9e-08 Score=93.91 Aligned_cols=104 Identities=18% Similarity=0.269 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCC------CCceEEEeecCCC-CcCcHHHHH-hcCCCHHHHHHHHHHHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYT------SGKVLTMEWVEGV-KLNEQVAIE-SQGLKVLDLVNTGIQCSLR 282 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LvmE~~~G~-~L~~~~~~~-~~~~~~~~~~~~~i~~~l~ 282 (487)
..+|.+++.++.+ ..|.+|+++.-.. ...+|+||+++|. +|.++.... .........+...+...+.
T Consensus 58 a~~E~~~~~~L~~-----~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 58 AKREWRNLQRLRE-----AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIA 132 (206)
T ss_pred HHHHHHHHHHHHH-----cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHH
Confidence 4556777777765 3567777754322 2348999999984 677764321 1223334555667778899
Q ss_pred HHHHCCccccCCCCCCeEEcCCC---cEEEEecCCCCCCC
Q 011399 283 QLLEYGYFHADPHPGNLLATPEG---KLAFLDFGMMSETP 319 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g---~i~l~DFGla~~l~ 319 (487)
.||..||+|+|++|+|||++.++ ++.+|||+-++.-.
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999999999999999999887 89999999877654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.2e-07 Score=89.77 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=28.3
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
..++|+|+||+||+++++| +.++||+.++.=++
T Consensus 153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gdp 185 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGKG-TYWIDLGDFGYGNP 185 (226)
T ss_pred CceEecCCCCCcEEEcCCC-cEEEechhcCcCCH
Confidence 3578999999999999888 99999998875444
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >PRK05231 homoserine kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.3e-06 Score=87.27 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=27.2
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
.|++|+|+||+||+++.+....++||+.+..-
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~ 218 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACND 218 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccCC
Confidence 48999999999999986555689999988754
|
|
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=3e-06 Score=83.67 Aligned_cols=94 Identities=16% Similarity=0.155 Sum_probs=64.2
Q ss_pred HHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhc
Q 011399 110 AEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI 189 (487)
Q Consensus 110 ~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~ 189 (487)
+.+++.+.+.+|..+.++ ++||.|.+++||+.... +| .+.+|..+......
T Consensus 2 ~~~~~~~~~~~~~~~~~~------~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~~~~~--------------------- 52 (297)
T PRK10593 2 EQLRAELSHLLGEKLSRV------ECISEQPYAALWALYDS-QG-NPMPLMARSFSTPG--------------------- 52 (297)
T ss_pred hHHHHHHHHHhchhhhee------eecCCccceeEEEEEcC-CC-CEEEEEecccccch---------------------
Confidence 345667777777655444 89999999999999764 44 57888864310110
Q ss_pred ccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecC-----CCCceEEEeecCCCCc
Q 011399 190 ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY-----TSGKVLTMEWVEGVKL 256 (487)
Q Consensus 190 ~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~-----~~~~~LvmE~~~G~~L 256 (487)
.+..|+.++..+.+. ..+.||+|+... .+..+||||+++|.++
T Consensus 53 --------------------~~~~Ea~~L~~L~~~----~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 53 --------------------VAQQEAWKLSMLARS----GTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred --------------------HHHHHHHHHHHHccC----CCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 145567777666532 358899999522 3557999999999876
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.1e-07 Score=87.94 Aligned_cols=34 Identities=29% Similarity=0.539 Sum_probs=24.3
Q ss_pred CCccccCCCCCCeEEc-CCCcEEEEecCCCCCCCH
Q 011399 287 YGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 287 ~givH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~ 320 (487)
.+++|+|+||+||+++ .+|++.|+||+.++.-++
T Consensus 166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~ 200 (239)
T PF01636_consen 166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDP 200 (239)
T ss_dssp EEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEET
T ss_pred cEEEEeccccccceeeeccceeEEEecccceECCH
Confidence 5699999999999999 677789999999876543
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=98.51 E-value=9e-07 Score=84.80 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=29.6
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
..++|+|++|+|||+++++.+.|+||+.++.-++.
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~ 197 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRY 197 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccccccHH
Confidence 35899999999999998777889999998865543
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.1e-06 Score=81.77 Aligned_cols=35 Identities=34% Similarity=0.514 Sum_probs=28.4
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
.+++|+|+||+||+++.++...++||+.+..=++.
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~ 198 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPA 198 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChH
Confidence 45899999999999986555679999998765543
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.5e-06 Score=76.50 Aligned_cols=149 Identities=15% Similarity=0.149 Sum_probs=97.9
Q ss_pred ccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 130 SISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 130 ~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
.+|+---|.|+-+.|++-.. .|..+-+|.+....... ..||+-. -
T Consensus 20 wve~pN~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s--------------------~r~P~g~-------------p 64 (216)
T PRK09902 20 WVEEPNYRRNGMSGVQCVER--NGKKLYVKRMTHHLFHS--------------------VRYPFGR-------------P 64 (216)
T ss_pred eecCCCcCCCCcceEEEEEe--CCcEEEEEeccCccccc--------------------ccCCCCc-------------h
Confidence 34444467799999999876 56789999885332221 1122211 1
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecC------CCCceEEEeecCC-CCcCcHHHHHhc---CCCHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDY------TSGKVLTMEWVEG-VKLNEQVAIESQ---GLKVLDLVNTGIQC 279 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LvmE~~~G-~~L~~~~~~~~~---~~~~~~~~~~~i~~ 279 (487)
-|.+|-.++.++.+. .+.+|+++... .-..+||+|-++| .+|.++...... +....+.+...+..
T Consensus 65 tf~rE~~~L~~L~~~-----GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~ 139 (216)
T PRK09902 65 TIVREVAVIKELERA-----GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVAL 139 (216)
T ss_pred HHHHHHHHHHHHHHc-----CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHH
Confidence 145556666666653 45577776321 1225899998876 466665322111 22233455566777
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCc--EEEEecCCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGK--LAFLDFGMMSET 318 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~--i~l~DFGla~~l 318 (487)
.+..+|..|+.|+|+-+.||+++.+|+ +++|||--++..
T Consensus 140 ~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 140 AFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 999999999999999999999987777 999999876653
|
|
| >KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=9.6e-07 Score=85.34 Aligned_cols=157 Identities=18% Similarity=0.231 Sum_probs=101.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||-|.-+.||.+-+. .|++.++|+-|-+... .+.++.=...+.+.. ...|..+-. +.-.+
T Consensus 98 nqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtS-----FR~Vk~kRDY~r~r~---~~sWlyLSR---------laa~k 159 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADE-EGNPLILKLHRLGRTS-----FRNVKNKRDYLRKRK---SGSWLYLSR---------LAATK 159 (465)
T ss_pred cccccccccceEEEecC-CCCchhHHHHhhhhhh-----HHHhhhhhhhHhcCC---ccchhhhHH---------HHHHH
Confidence 56999999999999987 8999999988755221 122221111111100 111111111 11223
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|-..+..+.+ ..+.||+++.. +++++|||+++|-+|..+... .++..++...+ ..+.-|-.+|+||+|
T Consensus 160 EfafmkaL~e-----~gfpVPkpiD~--~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly~~lm-~~Iv~la~~GlIHgD 227 (465)
T KOG2268|consen 160 EFAFMKALYE-----RGFPVPKPIDH--NRHCVVMELVDGYPLRQVRHV----EDPPTLYDDLM-GLIVRLANHGLIHGD 227 (465)
T ss_pred HHHHHHHHHH-----cCCCCCCcccc--cceeeHHHhhcccceeeeeec----CChHHHHHHHH-HHHHHHHHcCceecc
Confidence 3334444443 35678998864 788999999999999876322 34445554433 345567789999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
-.-=||++++++++++|||-.+...+.
T Consensus 228 FNEFNimv~dd~~i~vIDFPQmvS~sh 254 (465)
T KOG2268|consen 228 FNEFNIMVKDDDKIVVIDFPQMVSTSH 254 (465)
T ss_pred cchheeEEecCCCEEEeechHhhccCC
Confidence 999999999999999999987665543
|
|
| >cd05153 HomoserineK_II Homoserine Kinase, type II | Back alignment and domain information |
|---|
Probab=98.33 E-value=1e-05 Score=79.75 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=28.4
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
.+++|+|+||+|+++++++.+.|+||+.+..-
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g 206 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFACTD 206 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhcCc
Confidence 58999999999999998777899999988753
|
Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. |
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1e-05 Score=71.89 Aligned_cols=125 Identities=18% Similarity=0.252 Sum_probs=80.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||.|..|.||++.++ |..+|+|+++++..+. . +..
T Consensus 28 ~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~r~-----------------------------------~------l~k 64 (201)
T COG2112 28 KELAKGTTSVVYLGEWR--GGEVALKVRRRDSPRR-----------------------------------N------LEK 64 (201)
T ss_pred hhhhcccccEEEEeecc--CceEEEEEecCCcchh-----------------------------------h------HHH
Confidence 56999999999999985 7799999998663321 1 233
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
||+-++.+... -..|++|.. +..++.|||++|.+|.+.... .+... +...+.. ---|-..||-|..
T Consensus 65 EakiLeil~g~------~~~p~vy~y--g~~~i~me~i~G~~L~~~~~~----~~rk~-l~~vlE~-a~~LD~~GI~H~E 130 (201)
T COG2112 65 EAKILEILAGE------GVTPEVYFY--GEDFIRMEYIDGRPLGKLEIG----GDRKH-LLRVLEK-AYKLDRLGIEHGE 130 (201)
T ss_pred HHHHHHHhhhc------CCCceEEEe--chhhhhhhhhcCcchhhhhhc----ccHHH-HHHHHHH-HHHHHHhccchhh
Confidence 44444433322 235777654 555677999999998776321 12222 2222222 1224467999999
Q ss_pred CCCC--CeEEcCCCcEEEEecCCCC
Q 011399 294 PHPG--NLLATPEGKLAFLDFGMMS 316 (487)
Q Consensus 294 lkp~--Nili~~~g~i~l~DFGla~ 316 (487)
++-+ ||++ .++++.||||-.|+
T Consensus 131 l~~~~k~vlv-~~~~~~iIDFd~At 154 (201)
T COG2112 131 LSRPWKNVLV-NDRDVYIIDFDSAT 154 (201)
T ss_pred hcCCceeEEe-cCCcEEEEEccchh
Confidence 8753 5555 56699999999887
|
|
| >TIGR00938 thrB_alt homoserine kinase, Neisseria type | Back alignment and domain information |
|---|
Probab=98.25 E-value=3e-05 Score=77.06 Aligned_cols=32 Identities=28% Similarity=0.419 Sum_probs=28.7
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
.+++|+|+|++|+++++++.+.++||+.+..-
T Consensus 187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~ 218 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACTD 218 (307)
T ss_pred CccCCCCCCcCcEEEECCceEEEeecccccCc
Confidence 68999999999999998887799999988753
|
Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.2e-08 Score=109.51 Aligned_cols=125 Identities=18% Similarity=0.219 Sum_probs=90.3
Q ss_pred CCCceEEEeecCCCCcCcHH-HHH--hcCCCHHHHHHHHHHHHHHHHH-HCCccccCCCCCCeEEcCCC-cEEEEecCCC
Q 011399 241 TSGKVLTMEWVEGVKLNEQV-AIE--SQGLKVLDLVNTGIQCSLRQLL-EYGYFHADPHPGNLLATPEG-KLAFLDFGMM 315 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~-~~~--~~~~~~~~~~~~~i~~~l~~lh-~~givH~Dlkp~Nili~~~g-~i~l~DFGla 315 (487)
....++.+||.+|+++.+.. ... .........+..++..++.|+| ..|+.|+|+||.|.+++..| .+++.|||++
T Consensus 93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhh
Confidence 35568999999999998765 222 2334566778888889999999 99999999999999999999 9999999999
Q ss_pred CCCCH-HHHHHHHHHHHHHHhc-CHHHHHHHHH-HcCCCCCCCCcchHHHHHHHHHH
Q 011399 316 SETPE-EARFAIIGHVVHMVNR-DYEAMARDYY-ALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 316 ~~l~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
..... +...... ....+ +++..++++. ..++..+.+|+||.|+.+..++.
T Consensus 173 t~~~~~~g~~~~~----~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~ 225 (601)
T KOG0590|consen 173 TAYRNKNGAERSL----KDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLT 225 (601)
T ss_pred ccccccCCcceee----ecccCCCCCCCCcccccchhhcCCCccccccccccccccc
Confidence 88765 2111100 11112 3444444333 23678899999999988876654
|
|
| >PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein [] | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.7e-05 Score=77.65 Aligned_cols=92 Identities=20% Similarity=0.347 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhCCC--HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhh
Q 011399 109 DAEAFSCIERELGLT--LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKY 186 (487)
Q Consensus 109 ~~~~~~~i~~~lg~~--~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~ 186 (487)
|..+.+.|.+.+|.+ +.++ ++++.|.+.++|+.. .+++.+-||+........
T Consensus 2 w~~i~~~~~~~~~~~~~i~~~------~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~------------------ 55 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKITSI------EPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDM------------------ 55 (288)
T ss_dssp HHHHHHHHHHHHTS-----EE------EEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCH------------------
T ss_pred hHHHHHHHHHHhCCCCceeee------EecCCCChhheEEEE--CCCccEEEEecChhhHHH------------------
Confidence 467788899999876 3333 899999999999988 488999999986332221
Q ss_pred hhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCC
Q 011399 187 VDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGV 254 (487)
Q Consensus 187 ~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~ 254 (487)
|..|+..++.+.+ ...+.+|+|+. .+.+..+|+|||++.+
T Consensus 56 ------------------------f~~Ea~gL~~L~~----~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 56 ------------------------FEGEAEGLKALAE----ANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp ------------------------HHHHHHHHHHHCH----TTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred ------------------------HHHHHHHHHHHHh----cCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 4456666666643 24577899876 3456679999999887
|
Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A. |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.09 E-value=8.3e-06 Score=85.61 Aligned_cols=178 Identities=16% Similarity=0.140 Sum_probs=112.1
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
.+-++.+..+.|..+.+|.+|.|.+..-........-.+.. +++...+||+|..+++.+...
T Consensus 20 ~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~-------k~lKtlRHP~Il~yL~t~e~~----------- 81 (690)
T KOG1243|consen 20 TAFSSEALWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAV-------KRLKTLRHPNILSYLDTTEEE----------- 81 (690)
T ss_pred ccCCCcccccccceeccCCceEEEEEeCCCchhhHHHHHHH-------HHhhhccCchhhhhhhhhccc-----------
Confidence 33344443336777789999999988543331111111112 223345699999998865432
Q ss_pred HHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHH-HCCccccCC
Q 011399 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL-EYGYFHADP 294 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~givH~Dl 294 (487)
+..|||+|.+. +|..+ ++..+.........+|.+||.+|| +.+++|+.+
T Consensus 82 --------------------------~~~ylvTErV~--Pl~~~--lk~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv 131 (690)
T KOG1243|consen 82 --------------------------GTLYLVTERVR--PLETV--LKELGKEEVCLGLFQILAALSFLNDDCNLVHGNV 131 (690)
T ss_pred --------------------------CceEEEeeccc--cHHHH--HHHhHHHHHHHHHHHHHHHHHHHhccCCeeeccE
Confidence 56689999885 45444 333443344556688899999997 678999999
Q ss_pred CCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC---CCcchHHHHHHHHHHHh
Q 011399 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD---VDVTPIVPALRNFFDDA 371 (487)
Q Consensus 295 kp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~Di~sl~~~l~~~~~~~ 371 (487)
.-+-|+|+..|..||.+|-++...+..... --.........+|.. +++. +|.|-|||.+++++++.
T Consensus 132 ~~~SVfVn~~GeWkLggle~v~~~~~~~~~-~~~~~~~~s~~~P~~----------~~~s~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 132 CKDSVFVNESGEWKLGGLELVSKASGFNAP-AKSLYLIESFDDPEE----------IDPSEWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred eeeeEEEcCCCcEEEeeeEEEeccccCCcc-cccchhhhcccChhh----------cCccccchhhhhHHHHHHHHhCcc
Confidence 999999999999999999988654332100 000000011112221 1222 69999999999999874
Q ss_pred c
Q 011399 372 L 372 (487)
Q Consensus 372 ~ 372 (487)
.
T Consensus 201 ~ 201 (690)
T KOG1243|consen 201 L 201 (690)
T ss_pred c
Confidence 3
|
|
| >PLN02756 S-methyl-5-thioribose kinase | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00012 Score=74.48 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=62.9
Q ss_pred CCCCCCHHHHHHHHHHH------hCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHH
Q 011399 103 ALPTFPDAEAFSCIERE------LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLI 176 (487)
Q Consensus 103 ~~~~~~~~~~~~~i~~~------lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l 176 (487)
...+++.+.+..-+.+. +|.. +.....++||-|....||+... ++..|+||...|..+..-.
T Consensus 5 ~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga------ 72 (418)
T PLN02756 5 EFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGE------ 72 (418)
T ss_pred ccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCc------
Confidence 34455555555555443 3321 2233457899999999999886 4567999987755331000
Q ss_pred HHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCC
Q 011399 177 RGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEG 253 (487)
Q Consensus 177 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G 253 (487)
...+. +-.+ ..|+..+....+ ...+.||++|.......+++|||+++
T Consensus 73 -----------~wpl~----~~R~-----------~~Ea~aL~~~~~----~~p~~VPkVy~~ded~~vlvME~L~~ 119 (418)
T PLN02756 73 -----------SWPMT----KERA-----------YFEATALREHGR----LCPDHVPEVYHFDRTMALIGMRYLEP 119 (418)
T ss_pred -----------cccCC----ccHH-----------HHHHHHHHHhhh----cCCCCCCeEEEECCCCCEEEEeecCC
Confidence 00000 0000 112223322222 23468999998877889999999988
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00011 Score=74.89 Aligned_cols=111 Identities=21% Similarity=0.197 Sum_probs=64.0
Q ss_pred CCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCC-cEEEEEEecCChHHHHHHHHHHHHHHHHHHh
Q 011399 106 TFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSG-QIVAVKVQRPGIEEAIGLDFYLIRGVGFLIN 184 (487)
Q Consensus 106 ~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g-~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~ 184 (487)
++..+.+..-+....|.--. -.....++||.|.+..||++... +| +.|+||...|..+..
T Consensus 6 ~l~~~~v~~yl~~~~~~~~~--~~~~~~~elggGn~N~VyrV~~~-~g~~svIVKqa~p~~r~~---------------- 66 (401)
T PRK09550 6 TLTEEDAVEYAALKLGLFDP--KALLTAREIGDGNLNLVFRVSDT-EGGKSVIVKQALPYVRVV---------------- 66 (401)
T ss_pred eCCHhHHHHHHHHhcCCCCC--cccceeeEcCCCceEEEEEEEeC-CCCeEEEEEecCcccccc----------------
Confidence 44445555555333332100 12233478999999999999997 55 699999865442210
Q ss_pred hhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCC
Q 011399 185 KYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVK 255 (487)
Q Consensus 185 ~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~ 255 (487)
..++.--. +. ...|++.+..+... ....+|+||.......++||||+++..
T Consensus 67 ------g~~wpl~~----eR------~~~Eae~L~~l~~~----~p~~VPkV~~~D~~~~~lVME~L~~~~ 117 (401)
T PRK09550 67 ------GESWPLTL----DR------ARIEAEALKIQAKY----VPDLVPKVYHYDEELAVTVMEDLSDHK 117 (401)
T ss_pred ------cccccccH----HH------HHHHHHHHHHHHhh----CCCCCCeEEEECCCCCEEEEecCCCcc
Confidence 00000000 00 23345555544432 334699999877777899999998743
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.3e-05 Score=72.62 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=29.1
Q ss_pred CCccccCCCCCCeEEcC-CCcEEEEecCCCCCCCH
Q 011399 287 YGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPE 320 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~ 320 (487)
.+++|+|++|+|||+++ ++.+.++||-.++.-.+
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~ 204 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR 204 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch
Confidence 36999999999999997 57899999998876443
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >PRK12396 5-methylribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.00 E-value=9.1e-05 Score=74.97 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=38.3
Q ss_pred CCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC
Q 011399 103 ALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (487)
Q Consensus 103 ~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (487)
...++..+.+...+.+.+|. +..- +...-++||-|...-||++.+..+++.|+||--.|-
T Consensus 6 ~y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~ 65 (409)
T PRK12396 6 KYFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDT 65 (409)
T ss_pred cceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHh
Confidence 34456666666666554442 1100 122247899999999999998534678999975543
|
|
| >TIGR02721 ycfN_thiK thiamine kinase | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.2e-05 Score=73.17 Aligned_cols=33 Identities=33% Similarity=0.540 Sum_probs=28.8
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
.++|+|++|+||+++++| ++++||..++.=++.
T Consensus 147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp~ 179 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIA 179 (256)
T ss_pred eeecCCCCcCcEEEeCCC-CEEEeccccCcCCHH
Confidence 589999999999999877 899999998876554
|
Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function. |
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.91 E-value=9.5e-05 Score=83.25 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=63.5
Q ss_pred CCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCC--cEEEEEEecCChHHHHHHHHHHHHHHHHHH
Q 011399 106 TFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSG--QIVAVKVQRPGIEEAIGLDFYLIRGVGFLI 183 (487)
Q Consensus 106 ~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g--~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~ 183 (487)
+++.+.+..-+.+.++. +..-...+.-++++.|..+.+|+.....++ ..+++|+..++....
T Consensus 17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--------------- 80 (822)
T PLN02876 17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--------------- 80 (822)
T ss_pred cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc---------------
Confidence 35666666666655431 111001123378999999999998875222 478888765441100
Q ss_pred hhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCC-----CCceEEEeecCCCCcC
Q 011399 184 NKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYT-----SGKVLTMEWVEGVKLN 257 (487)
Q Consensus 184 ~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~-----~~~~LvmE~~~G~~L~ 257 (487)
. .-++.+|++.+..+.. +..+.+|+++.... +..++||||++|..+.
T Consensus 81 ---------~--------------~~~~~rE~~~l~~L~~----~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~ 132 (822)
T PLN02876 81 ---------S--------------AHAVEREYQVLRALGE----HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFV 132 (822)
T ss_pred ---------c--------------HHHHHHHHHHHHHHhh----cCCCCCCcEEEEecCCCcCCCceEEEEecCCcccC
Confidence 0 0013345555554432 34588999887533 3568999999997653
|
|
| >PRK06148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00023 Score=81.60 Aligned_cols=56 Identities=16% Similarity=0.383 Sum_probs=44.0
Q ss_pred hhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC
Q 011399 100 LQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (487)
Q Consensus 100 lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (487)
+....|.++.+++.+.+++.+|..- .+ ++|++ ..-++|+.... +|+.+++|+.++.
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-----~~--~~L~s-~~d~nf~v~~~-~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-----TA--TPLDG-ERDLNFRLTTD-DGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-----EE--eecCC-cCCceEEEEeC-CCCeEEEEEcCCc
Confidence 4456788999999999999999642 22 67864 56899999875 7889999999875
|
|
| >COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0013 Score=64.94 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=31.4
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
..++|+|.|++|+++++++.+.++||+++..=++.
T Consensus 198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPL 232 (321)
T ss_pred ceeeeCCcccCCEEEeCCCeeEEEeccccccCCcH
Confidence 46899999999999999999999999999876654
|
|
| >cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2') | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0006 Score=66.60 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=29.3
Q ss_pred CCccccCCCCCCeEEcCCCc-EEEEecCCCCCCCHH
Q 011399 287 YGYFHADPHPGNLLATPEGK-LAFLDFGMMSETPEE 321 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~-i~l~DFGla~~l~~~ 321 (487)
..++|+|+||+||+++++|+ ..|+|||.+..-++.
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa 220 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPA 220 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHH
Confidence 35899999999999987566 579999999876654
|
MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported |
| >cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00037 Score=68.96 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=30.2
Q ss_pred CCccccCCCCCCeEEcCC----CcEEEEecCCCCCCCHH
Q 011399 287 YGYFHADPHPGNLLATPE----GKLAFLDFGMMSETPEE 321 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~----g~i~l~DFGla~~l~~~ 321 (487)
.+++|+|++|+||+++++ +.+++|||..++.-.+.
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~ 217 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRG 217 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcH
Confidence 468999999999999975 88999999999875543
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00062 Score=70.71 Aligned_cols=130 Identities=16% Similarity=0.102 Sum_probs=88.9
Q ss_pred CCceEEEeecCCCCcCcHHHHHhcCCCHHHH--HHHHHHHHHHHHHHCCc-cccCCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVLDL--VNTGIQCSLRQLLEYGY-FHADPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~--~~~~i~~~l~~lh~~gi-vH~Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
...+.+-+||.-|+|.|....+....+..-. ..+-+..++.|+|.--+ +|+-+++.|.+++..-.+|+.|||+....
T Consensus 20 ~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~ 99 (484)
T KOG1023|consen 20 PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLL 99 (484)
T ss_pred CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccc
Confidence 4456889999999999987665555554322 23456679999998655 99999999999999999999999998877
Q ss_pred CHH-HHHHHHHHHHHHHhcCHHHHHHHHH-Hc-CCCCCCCCcchHHHHHHHHHHHh
Q 011399 319 PEE-ARFAIIGHVVHMVNRDYEAMARDYY-AL-DFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 319 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
... ....-........+..|+.+..... .. .-.+...|++|++..++|++...
T Consensus 100 ~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 100 EETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred cccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 421 0000111123344455555533211 11 11466789999999999999743
|
|
| >COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0015 Score=65.22 Aligned_cols=29 Identities=31% Similarity=0.525 Sum_probs=26.5
Q ss_pred ccccCCCCCCeEEcCCCc-EEEEecCCCCC
Q 011399 289 YFHADPHPGNLLATPEGK-LAFLDFGMMSE 317 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~-i~l~DFGla~~ 317 (487)
++|+|+||+||+++.++. +.++|||-++.
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 999999999999998885 99999998864
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.58 E-value=4.1e-06 Score=86.81 Aligned_cols=191 Identities=15% Similarity=0.129 Sum_probs=106.7
Q ss_pred ccccc--ccccEEEEEEE--ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAA--ASLGQVYKAQL--KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~--Gs~gqV~~a~~--~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
..+|+ |++|+||.+.. +.++..+|+|..+.-...-. .-.+....+........|.+.+.
T Consensus 120 ~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~----~~~~k~~~~~s~~~i~~~~~~v~------------- 182 (524)
T KOG0601|consen 120 SRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPL----DSKRKLREFLSHHKIDSHENPVR------------- 182 (524)
T ss_pred cccccCCCCCceeecccCCcccCCcccccccccCCCCCcc----ccccccchhhcccccCccccccc-------------
Confidence 67999 99999999998 88999999998642211000 00000000000000001111111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc--CCCHHHHHHHHHHH----HHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--GLKVLDLVNTGIQC----SLRQ 283 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~~~~~~~~i~~----~l~~ 283 (487)
-...|+-++..++-.|+|. .++..+...... ..+...-....... |+.+
T Consensus 183 ------------------------~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~ 237 (524)
T KOG0601|consen 183 ------------------------DSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSH 237 (524)
T ss_pred ------------------------cCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccc
Confidence 1123445566788888886 455554332211 11111111223334 8999
Q ss_pred HHHCCccccCCCCCCeEEcCC-CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~-g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
+|..+++|-|+||.||+...+ ..+++.|||++..+.+..-....... .-..++.-+++... .-|......|+.+++.
T Consensus 238 ~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~-~~~l~~~~~di~sl~e 315 (524)
T KOG0601|consen 238 LHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVS-KRPEGDCIYAAKEL-LNGLATFASDIFSLGE 315 (524)
T ss_pred cCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeee-ecCCCCceEeChhh-hccccchHhhhcchhh
Confidence 999999999999999999999 78999999999988765311100000 01122222333333 2344466677888777
Q ss_pred HHHHHH
Q 011399 363 ALRNFF 368 (487)
Q Consensus 363 ~l~~~~ 368 (487)
.+.+..
T Consensus 316 v~l~~~ 321 (524)
T KOG0601|consen 316 VILEAI 321 (524)
T ss_pred hhHhhH
Confidence 665544
|
|
| >COG3001 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0022 Score=59.68 Aligned_cols=96 Identities=11% Similarity=0.156 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhh
Q 011399 109 DAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVD 188 (487)
Q Consensus 109 ~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~ 188 (487)
|..+...+.+.+|.. ++ -+.+++.-|.+-+.|+..+ +..++-||+.......
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d--g~~~~FvK~n~~~~~~--------------------- 53 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD--GTDPFFVKCNQREQLS--------------------- 53 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec--CCcceEEEecchhhHH---------------------
Confidence 566777888888875 22 1235666666655555543 4578999986522111
Q ss_pred cccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCC--CCceEEEeecCCCCcC
Q 011399 189 IITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLN 257 (487)
Q Consensus 189 ~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~ 257 (487)
-|..|+..++.+.+. ..|.||+|+...+ +..||||||++-+++.
T Consensus 54 ---------------------~f~AEa~gL~~la~s----~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 54 ---------------------MFTAEADGLELLARS----NTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred ---------------------HHHHHHHHHHHHHhc----CCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 155666666666543 5689999997655 4469999999988776
|
|
| >TIGR01767 MTRK 5-methylthioribose kinase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0005 Score=68.86 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=25.3
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCC
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~ 317 (487)
...++|+|+|||||++++++ ++++||-.+..
T Consensus 191 ~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~ 221 (370)
T TIGR01767 191 AETLLHGDLHSGSIFVSEHE-TKVIDPEFAFY 221 (370)
T ss_pred cceeeeccCCcccEEEcCCC-CEEEcCccccc
Confidence 35689999999999997654 78999976554
|
This enzyme is involved in the methionine salvage pathway in certain bacteria. |
| >PRK11768 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0027 Score=63.59 Aligned_cols=30 Identities=30% Similarity=0.423 Sum_probs=25.7
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
.|++|+|+||+||+++ + .+.++||+-++.=
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~g 225 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARMG 225 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCCCCC
Confidence 4799999999999995 4 5889999998753
|
|
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0035 Score=57.86 Aligned_cols=158 Identities=16% Similarity=0.178 Sum_probs=92.1
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
..+||+|+.=.||.- .+....+|||.++....... ....+..++.+. .-... ++
T Consensus 6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~-------~~~~~~k~~~~~----------~~~~~------~~ 59 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRR-------PFKRWLKRLRPK----------SRYRQ------NR 59 (199)
T ss_pred CcccccCCCceEEEC---CCCCCeEEEEEccccccccc-------cchhHHHhhccc----------chhHH------HH
Confidence 378999999888843 36678899999987511100 011111111100 00112 23
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCC--ceEEEeecCC--CCcCc-HHH-HHhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSG--KVLTMEWVEG--VKLNE-QVA-IESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~--~~LvmE~~~G--~~L~~-~~~-~~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
+|...-..+.. -.+.....+|+.|....|. .-+|+|.+.. |.++. +.. ....+.+. .....+....+++.+
T Consensus 60 ~E~~~y~~l~~-~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~--~~~~~L~~f~~~l~~ 136 (199)
T PF10707_consen 60 RELRYYKQLSL-RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE--ELRQALDEFKRYLLD 136 (199)
T ss_pred HHHHHHHHHhh-ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH--HHHHHHHHHHHHHHH
Confidence 33333333332 3445567788888654433 4689998854 23322 111 23334444 455666778899999
Q ss_pred CCccccCCCCCCeEEcCC--C--cEEEEe-cCCCCCCC
Q 011399 287 YGYFHADPHPGNLLATPE--G--KLAFLD-FGMMSETP 319 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~--g--~i~l~D-FGla~~l~ 319 (487)
++|+.+|++|+||++... | ++.++| ||-...++
T Consensus 137 ~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~ip 174 (199)
T PF10707_consen 137 HHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELIP 174 (199)
T ss_pred cCCeecCCCcccEEEEecCCCceEEEEEeCCCCccccc
Confidence 999999999999999743 2 589999 56655544
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.46 E-value=8.7e-05 Score=77.12 Aligned_cols=142 Identities=18% Similarity=0.184 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEEc-cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLK-YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
..||.|.|+.|+....+ .++..+++|....+.... ..|+.-+..+. +....
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~-~~di~sl~ev~----------------l~~~l----------- 322 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF-ASDIFSLGEVI----------------LEAIL----------- 322 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccch-Hhhhcchhhhh----------------HhhHh-----------
Confidence 67999999999988755 578899999876543322 22222111111 00000
Q ss_pred HHHHHHHHHHHHhCCCCCeEece--eeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPD--IFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~--v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
..+..++. .-|..-.+.++--|||+|++....... .....+.......++..++.++|+..+
T Consensus 323 ---------------~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~ 387 (524)
T KOG0601|consen 323 ---------------GSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLF 387 (524)
T ss_pred ---------------hcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhh
Confidence 00111222 234444666799999999887654322 223345556666778889999999999
Q ss_pred cccCCCCCCeEEcCC-CcEEEEecCCCCCC
Q 011399 290 FHADPHPGNLLATPE-GKLAFLDFGMMSET 318 (487)
Q Consensus 290 vH~Dlkp~Nili~~~-g~i~l~DFGla~~l 318 (487)
+|.|++|.||++..+ +-.++.|||+...+
T Consensus 388 ~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 388 VHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred hcccccccceeeccchhhhhcccccccccc
Confidence 999999999999876 77899999988754
|
|
| >PRK06149 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0021 Score=73.62 Aligned_cols=58 Identities=12% Similarity=0.298 Sum_probs=42.0
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC
Q 011399 97 LSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (487)
Q Consensus 97 l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (487)
+..+....|.++.+++.+.+.+.+|.. . .+ .+++++. -.+|+.... +..+++|+.++.
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~-~----~~--~~L~s~~-d~nf~v~t~--~~~yVLKi~~~~ 64 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLS-G----TL--TELGSQQ-DRNFRVDSD--GGRFVLKICHAA 64 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCc-e----EE--EecCCcC-cceEEEEec--CCcEEEEeCCcc
Confidence 445666788899999999999988864 1 12 5676544 478988764 457888998865
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00012 Score=80.64 Aligned_cols=139 Identities=15% Similarity=0.007 Sum_probs=83.5
Q ss_pred cccCCCCC-CeEEcCCCcEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 290 FHADPHPG-NLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 290 vH~Dlkp~-Nili~~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
-|+++.|. |+++++++..++.|||.++.+........ ...+.+..+..||.+ ...-.++.+|+||+||.++++
T Consensus 499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l-----~~~~~~~~~DiwSlG~il~El 573 (669)
T cd05610 499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELL-----LGKPHGPAVDWWALGVCLFEF 573 (669)
T ss_pred CCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHc-----CCCCCCcHHHHHHHHHHHHHH
Confidence 45666666 67778888889999998876543211100 011223334444443 223347789999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+++. .++.......++..+. ...... |-. .....+.+.
T Consensus 574 ltG~--~pf~~~~~~~~~~~il-------------------------------~~~~~~-----p~~----~~~~~~~~~ 611 (669)
T cd05610 574 LTGI--PPFNDETPQQVFQNIL-------------------------------NRDIPW-----PEG----EEKLSVNAQ 611 (669)
T ss_pred HHCC--CCCCCCCHHHHHHHHH-------------------------------hcCCCC-----Ccc----cccCCHHHH
Confidence 9853 3444333322221110 000000 000 012356777
Q ss_pred HHHHHHHhhcCcccccccchhhcccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+..||.+||..|++..+.+.|+||..
T Consensus 612 ~~l~~lL~~dP~~R~ta~e~l~h~~~~~ 639 (669)
T cd05610 612 NAIEILLTMDPTKRAGLKELKQHPLFHG 639 (669)
T ss_pred HHHHHHcccChhHCcCHHHHHhCHhhcC
Confidence 8888999999999999999999999854
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00023 Score=67.07 Aligned_cols=212 Identities=11% Similarity=0.104 Sum_probs=115.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCC-hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
..|+..--|..|+|++. |..+++|++.-. ....+.+|. .....++..+.|||+..++..+...
T Consensus 196 tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdf------neefp~lrifshpnilpvlgacnsp-------- 259 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDF------NEEFPALRIFSHPNILPVLGACNSP-------- 259 (448)
T ss_pred hhhccCCCccccccccc--Ccchhhhhhhhhhcchhhcchh------hhhCcceeeecCCchhhhhhhccCC--------
Confidence 56788888999999995 778888887521 122222222 1122223334588888877754311
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-CCCHHH--HHHHHHHHHHHHHHHCC-
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKVLD--LVNTGIQCSLRQLLEYG- 288 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~~~--~~~~~i~~~l~~lh~~g- 288 (487)
...+++..|++-++|..+...... -.+..+ .....+..++.|+|+..
T Consensus 260 -----------------------------pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep 310 (448)
T KOG0195|consen 260 -----------------------------PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEP 310 (448)
T ss_pred -----------------------------CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcch
Confidence 334689999999999876432111 123223 23344666899999753
Q ss_pred -ccccCCCCCCeEEcCCCc--EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 289 -YFHADPHPGNLLATPEGK--LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 289 -ivH~Dlkp~Nili~~~g~--i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
+----+....++|+++-+ +-..|--++-+- .|-.++.+.-+||.+...--... -...|+|||...++
T Consensus 311 ~ipr~~lns~hvmidedltarismad~kfsfqe--------~gr~y~pawmspealqrkped~n--~raadmwsfaillw 380 (448)
T KOG0195|consen 311 MIPRFYLNSKHVMIDEDLTARISMADTKFSFQE--------VGRAYSPAWMSPEALQRKPEDLN--IRAADMWSFAILLW 380 (448)
T ss_pred hhhhhhcccceEEecchhhhheecccceeeeec--------cccccCcccCCHHHHhcCchhcc--hhhhhHHHHHHHHH
Confidence 222346677888887754 444442222110 11122233334554433211111 23469999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYA 404 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~ 404 (487)
|+.+. +.|+.+++.-+....+ .+......+||..+
T Consensus 381 el~tr--evpfadlspmecgmki--aleglrv~ippgis 415 (448)
T KOG0195|consen 381 ELNTR--EVPFADLSPMECGMKI--ALEGLRVHIPPGIS 415 (448)
T ss_pred Hhhcc--ccccccCCchhhhhhh--hhccccccCCCCcc
Confidence 99874 3566666543322221 22334455565543
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.012 Score=60.84 Aligned_cols=138 Identities=16% Similarity=0.177 Sum_probs=92.4
Q ss_pred cEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHH
Q 011399 142 GQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRF 221 (487)
Q Consensus 142 gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~ 221 (487)
...|+|....||..|++|.++-........|..+.. .+.+..|.|++.+.+.|...
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve-------~wkkl~h~NvV~frevf~t~----------------- 345 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVE-------AWKKLCHTNVVPFREVFLTY----------------- 345 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHH-------HHHHhccCceeehhhhhhhh-----------------
Confidence 467999999999999999985443333344444443 33344588888887766522
Q ss_pred HHHhCCCCCeEeceeeecCCCCceEEEeecCC-CCcCcHHHH--------------HhcCCC--HHHHHHHHHHHHHHHH
Q 011399 222 KKLYADKEDVLVPDIFWDYTSGKVLTMEWVEG-VKLNEQVAI--------------ESQGLK--VLDLVNTGIQCSLRQL 284 (487)
Q Consensus 222 ~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G-~~L~~~~~~--------------~~~~~~--~~~~~~~~i~~~l~~l 284 (487)
.|. ....++|.+|.++ ++|.+.--. ...+.. ..-.+..|+..+|.++
T Consensus 346 --tF~--------------D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sI 409 (655)
T KOG3741|consen 346 --TFG--------------DLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSI 409 (655)
T ss_pred --ccC--------------cceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 111 1445789999887 344332110 001111 2223456777899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCC
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~ 319 (487)
|+.|+--+-+.|.+|+++.+.+|+|.-.|....+.
T Consensus 410 HssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 410 HSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HhcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 99999999999999999988899999888876553
|
|
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0046 Score=56.89 Aligned_cols=54 Identities=20% Similarity=0.293 Sum_probs=37.7
Q ss_pred eEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCC
Q 011399 245 VLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMM 315 (487)
Q Consensus 245 ~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla 315 (487)
-||.||++...-. .... ...+..-+..+|..||+-+|+++.|.. +| +|+|||.+
T Consensus 153 aIVKD~v~~~~~~----------~~~~--~~~~~~dl~~~~k~gI~~~Dv~~~ny~---~G--~lvDfs~~ 206 (207)
T PF13095_consen 153 AIVKDFVPDDPPL----------QIRD--IPQMLRDLKILHKLGIVPRDVKPRNYR---GG--KLVDFSSS 206 (207)
T ss_pred EEEEeecCCcccc----------chhH--HHHHHHHHHHHHHCCeeeccCcccccc---CC--EEEecccC
Confidence 5788888765411 1111 123445677899999999999999985 44 68999965
|
|
| >KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0068 Score=59.19 Aligned_cols=171 Identities=22% Similarity=0.224 Sum_probs=99.8
Q ss_pred hhhcccCCcccccccccEEEEEEEc-------c---CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLK-------Y---SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVV 195 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~-------~---~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~ 195 (487)
.+|+.++ ..|..|.-+.|..|.-- . .-+.+|||+.+....+--++|-. ++-=.++..+++ ..|..
T Consensus 251 gvle~i~-GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~Y-iKDDfRFKDRFS---K~NpR 325 (531)
T KOG2269|consen 251 GVLESID-GIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEY-IKDDFRFKDRFS---KQNPR 325 (531)
T ss_pred hhHHhhh-hhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhh-hccchhhhhhhc---ccCcH
Confidence 3455554 46888888888877431 0 23578888876544433333321 121222233333 23455
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh--cCCCHHHHH
Q 011399 196 ALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLV 273 (487)
Q Consensus 196 ~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~ 273 (487)
.++..+.+ +|..|+.+.... .+.+|.|+.- ...+|||.|+-...+..- .++. ..-+..+.+
T Consensus 326 ~i~~mWAE---------kEmhNL~RMq~~-----GlpcP~vV~l--kkhvLVMsFiGd~~~aAP-kLK~v~l~d~E~~~a 388 (531)
T KOG2269|consen 326 GILKMWAE---------KEMHNLSRMQKH-----GLPCPQVVKL--KKHVLVMSFIGDQGLAAP-KLKNVELTDDERRNA 388 (531)
T ss_pred HHHHHHHH---------HHHHHHHHHHhc-----CCCCCceeee--ecceEEEEeecCCCCCCc-cccccccChHHHHHH
Confidence 55554443 366777777653 4566766643 677999999954333211 1111 222233334
Q ss_pred HHHHHHHHHH-HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCC
Q 011399 274 NTGIQCSLRQ-LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (487)
Q Consensus 274 ~~~i~~~l~~-lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~ 319 (487)
-.+++..+.. -|+.-++|+|+.--|+|+.+ |++.+||-..+...+
T Consensus 389 Y~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~-gKvw~IDVsQsvep~ 434 (531)
T KOG2269|consen 389 YDQVQSIMCRLYKECLLVHADLSEYNLLWTP-GKVWVIDVSQSVEPS 434 (531)
T ss_pred HHHHHHHHHHHHHhhheeecchhhhhheecC-CceEEEechhccCCC
Confidence 4555554444 46889999999999999965 599999987766543
|
|
| >PLN02236 choline kinase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0082 Score=60.62 Aligned_cols=35 Identities=23% Similarity=0.483 Sum_probs=29.6
Q ss_pred CCccccCCCCCCeEEcC-CCcEEEEecCCCCCCCHH
Q 011399 287 YGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~ 321 (487)
..++|+|++++||++++ ++.+.++||..++.-++.
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~ 235 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVA 235 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchH
Confidence 36899999999999986 478999999999865543
|
|
| >PRK10271 thiK thiamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0031 Score=57.41 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=28.9
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
-.+|+|+||+|++++++| ++++||+.++.-++.
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~ 110 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIA 110 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccCCCHH
Confidence 469999999999998777 999999999877665
|
|
| >PLN02421 phosphotransferase, alcohol group as acceptor/kinase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.021 Score=57.26 Aligned_cols=33 Identities=39% Similarity=0.557 Sum_probs=28.6
Q ss_pred ccccCCCCCCeEEcC-CCcEEEEecCCCCCCCHH
Q 011399 289 YFHADPHPGNLLATP-EGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 289 ivH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~ 321 (487)
+.|.|++|+||++++ ++.+++|||..++.-++.
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~ 217 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRG 217 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCCCccH
Confidence 799999999999975 578999999999876554
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.011 Score=54.10 Aligned_cols=85 Identities=15% Similarity=0.205 Sum_probs=57.5
Q ss_pred EeceeeecCCCCceEEEeecCCCCcCc----HHHHHhcCCCHHHHHHHHHHHHHHHHHH---CCccccCCCCCCeEEcCC
Q 011399 232 LVPDIFWDYTSGKVLTMEWVEGVKLNE----QVAIESQGLKVLDLVNTGIQCSLRQLLE---YGYFHADPHPGNLLATPE 304 (487)
Q Consensus 232 ~vP~v~~~~~~~~~LvmE~~~G~~L~~----~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~givH~Dlkp~Nili~~~ 304 (487)
.+|+++.. ...+++.||+..+++.. +............-++.++...+.+++. ..+.-.|++|+|+-++++
T Consensus 21 ~~pk~lG~--CG~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~ 98 (188)
T PF12260_consen 21 PFPKLLGS--CGRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDD 98 (188)
T ss_pred CCCCeeeE--CCCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCC
Confidence 68888864 45678999998765532 1111112222333344555566666665 447779999999999999
Q ss_pred CcEEEEecCCCCCC
Q 011399 305 GKLAFLDFGMMSET 318 (487)
Q Consensus 305 g~i~l~DFGla~~l 318 (487)
|+++++|...+...
T Consensus 99 ~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 99 GRLKLIDLDDVFVE 112 (188)
T ss_pred CcEEEEechhcchh
Confidence 99999999877654
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.0014 Score=72.56 Aligned_cols=76 Identities=22% Similarity=0.190 Sum_probs=58.5
Q ss_pred CCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCC
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 316 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~ 316 (487)
.+..+|+|+|..|+++....+.-. ....+.+.....+....+++|...+.|+|++|.|+++..+|...+.|||...
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccc
Confidence 356789999999988866522211 2233455555666678999999999999999999999999999999998433
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.0083 Score=62.68 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=26.3
Q ss_pred CCcCcHHHHHHHHHHHHhhCCCCCChHHHH
Q 011399 376 VSELNFKTIVDGLGAVLYQYPFNVPAYYAL 405 (487)
Q Consensus 376 ~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~ 405 (487)
-.+.+|..++|++|+++|...++-||+-..
T Consensus 192 k~gHsfEvDiWSlGcvmYtLL~G~PPFetk 221 (592)
T KOG0575|consen 192 KSGHSFEVDIWSLGCVMYTLLVGRPPFETK 221 (592)
T ss_pred cCCCCCchhhhhhhhHHHhhhhCCCCcccc
Confidence 567789999999999999999999998543
|
|
| >COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.041 Score=54.79 Aligned_cols=178 Identities=15% Similarity=0.059 Sum_probs=90.0
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCC-hHHHHHHHHHHHHHHHHHHhh--hhh-------------ccc
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-IEEAIGLDFYLIRGVGFLINK--YVD-------------IIT 191 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-~~~~~~~dl~~l~~~~~~~~~--~~~-------------~~~ 191 (487)
+..++..|++.|..+.++.|+++ +...++=+...-+ -......|..+++.+..+... +.. ..+
T Consensus 154 s~~kk~~pvpDqvs~dk~Q~k~~-~stsl~~l~s~~~l~~n~~d~d~~nl~QI~q~~dvk~fan~~~v~~vlgl~~~ln~ 232 (488)
T COG5072 154 SQTKKICPVPDQVSSDKIQAKLA-DSTSLVSLVSPFGLPGNAQDADVLNLVQILQWCDVKGFANLHQVVVVLGLYPSLNL 232 (488)
T ss_pred ccccccccCcccchhhhhhhhhc-cCcceeeccccccCCCCccccchHHHHHHHHHhhhhhhccccceeEEecccccccc
Confidence 45566789999999999999987 7777777765433 112234455555555544321 100 112
Q ss_pred CCHHHHHHHHHHHHHHHhcHH-------------------HHHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeec
Q 011399 192 TDVVALIDEFASRVYQELNYV-------------------QEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWV 251 (487)
Q Consensus 192 ~~i~~~~~~~~~~l~~Eld~~-------------------~Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~ 251 (487)
+..+++...+. +|+++. .|....+-...........--|.++. +.+.-.|++|++-
T Consensus 233 ~~s~qlssn~~----q~~i~kkvs~g~~~~~~~d~~fls~~ele~l~L~qw~~~g~~~~e~~~vv~~de~~y~yl~~kdh 308 (488)
T COG5072 233 EESDQLSSNNW----QENICKKVSLGSTQDYTVDCLFLSLTELEHLELRQWRECGSVFLETLKVVSLDETLYLYLHFKDH 308 (488)
T ss_pred hhhhHHhhhcc----hheeecccccccchhhhhhhhhhhccccchhhhhhhhhccchhhhcceEEecCCceEEEEEEecC
Confidence 22222222211 121111 01111111111111222233344444 2233346777765
Q ss_pred CCCCcCcHHHHHhcCCCHHHHHHHHH-HHHHHHHHH--CCccccCCCCCCeEEcCCCcEEEEecCCCCC
Q 011399 252 EGVKLNEQVAIESQGLKVLDLVNTGI-QCSLRQLLE--YGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317 (487)
Q Consensus 252 ~G~~L~~~~~~~~~~~~~~~~~~~~i-~~~l~~lh~--~givH~Dlkp~Nili~~~g~i~l~DFGla~~ 317 (487)
|+++.-.... +..+...... +..+-+..+ ..+=|||++-+||||+ +|+|.||||-+++.
T Consensus 309 -gt~is~ik~~-----~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 309 -GTPISIIKAD-----RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred -Cceeeeeecc-----cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 5566543111 1112211111 113333333 4578999999999998 99999999999983
|
|
| >PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties [] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.051 Score=52.15 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=26.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCC
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (487)
.++..|+.+.|+.++.. +|+++++|+..|.
T Consensus 8 ~~~~~g~~s~V~pv~~~-dG~~avLKl~~p~ 37 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRA-DGTPAVLKLAPPH 37 (253)
T ss_pred CCCCCCcceEEEEEEcC-CCCeEEEEecCCc
Confidence 46778999999999977 9999999999876
|
Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process |
| >TIGR02906 spore_CotS spore coat protein, CotS family | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.051 Score=53.78 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=26.6
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCC
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~ 317 (487)
.|++|+|+|++||+++. +.+.++||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 58999999999999987 7799999997654
|
Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.018 Score=56.17 Aligned_cols=88 Identities=17% Similarity=0.227 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHC-
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG-----LKVLDLVNTGIQCSLRQLLEY- 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-----~~~~~~~~~~i~~~l~~lh~~- 287 (487)
.+.|+.+|++...+...--.|++ +.+.||++.|++....+..+.. ....+....+|..||.|||+.
T Consensus 125 vHsnlvkfH~yw~d~K~~e~~rv--------iFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~ 196 (458)
T KOG1266|consen 125 VHSNLVKFHKYWTDKKYEEKPRV--------IFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD 196 (458)
T ss_pred HHHHHHHHHHhhcccccccccce--------EEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC
Confidence 35577888877766554344443 4889999999998875532221 223345557889999999986
Q ss_pred -CccccCCCCCCeEEcCCCcEEE
Q 011399 288 -GYFHADPHPGNLLATPEGKLAF 309 (487)
Q Consensus 288 -givH~Dlkp~Nili~~~g~i~l 309 (487)
-++|+.+.-.-|++.++|-||+
T Consensus 197 PpiihgnlTc~tifiq~ngLIki 219 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKI 219 (458)
T ss_pred CccccCCcchhheeecCCceEEe
Confidence 4999999999999998887764
|
|
| >PTZ00384 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.49 Score=48.46 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=27.0
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
..+.|.|+.++||+.+ ++.+.+|||-.|+.-.+
T Consensus 227 ~VfCHNDL~~gNIL~~-~~~l~lID~EYA~~n~~ 259 (383)
T PTZ00384 227 VLFCHNDLFFTNILDF-NQGIYFIDFDFAGFNYV 259 (383)
T ss_pred eeeeeccCCcccEEec-CCCEEEEEeccccCCch
Confidence 5789999999999875 55699999988875443
|
|
| >PTZ00296 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.65 Score=48.50 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=27.4
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
..+.|.|+.++|||.+. +.+.||||-.++.-.+.
T Consensus 284 ~VfCHNDl~~~NiL~~~-~~l~LIDfEYAg~ndpa 317 (442)
T PTZ00296 284 IVFCHNDLQENNIINTN-KCLRLIDFEYSGYNFLA 317 (442)
T ss_pred eeEEeCCCCccceeecC-CCEEEEeecccccccHH
Confidence 35899999999998764 44999999988865443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 487 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-11 | |
| 4fev_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 8e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.6 bits (159), Expect = 2e-11
Identities = 82/555 (14%), Positives = 160/555 (28%), Gaps = 151/555 (27%)
Query: 40 FSLKLLIDQRNGVLDQ-------NKRKRAAELRRIFTRL--GPT-----FVK-------- 77
F K + D +L + + + R+F L FV+
Sbjct: 33 FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92
Query: 78 -LGQGLSTR---PDICPPEYLEELSELQDALPTFPDAEAFSCIER-ELGLTLDSIFSSIS 132
L + T P + Y+E+ L + F + R + L L +
Sbjct: 93 FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN----VSRLQPYLKLRQALLELR 148
Query: 133 PSPIA-------------AASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGV 179
P+ A + YK Q K +I + ++ E + L+
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV-LE------- 200
Query: 180 GFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD 239
++ K + I + + D +S + ++ +Q RR K + +LV +
Sbjct: 201 --MLQKLLYQIDPNWTSRSD-HSSNIKLRIHSIQA--ELRRLLKSKPYENCLLVLLNVQN 255
Query: 240 YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNL 299
K L+ ++ + ++ +V D ++ + L+ H
Sbjct: 256 ---AKA-----WNAFNLSCKILLTTRFKQVTDFLSAATTTHIS--LD--------HHSMT 297
Query: 300 LATPEGKLAFLDF-GM-MSETPEEAR------FAIIGHVVH-MVNR-------DYEAMA- 342
L E K L + + P E +II + + + + +
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357
Query: 343 --------------RDYY-ALDFLSPDVDVTPIVPAL----------RNFFDDALNSSVS 377
R + L P + I+ +L + S+
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417
Query: 378 ELNFKTIVDGLGAVLYQYPFNVPAYYAL---ILRSLTVLEGLALYADPNFKVLAASYPYF 434
E K + ++ + + YAL I+ + + D + + YF
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF----DSDDLIPPYLDQYF 473
Query: 435 AKRL---LTDPNPYLRDALVELLFKDGRF-----RHV------------------LYSPF 468
+ L + R L ++F D RF RH Y P+
Sbjct: 474 YSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY 533
Query: 469 -TINLVDFEFVVCDI 482
N +E +V I
Sbjct: 534 ICDNDPKYERLVNAI 548
|
| >4fev_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, PP1, protein kinase inhibitor; HET: KAN PP1; 1.89A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4ej7_A* 3r78_A* Length = 272 | Back alignment and structure |
|---|
Score = 40.4 bits (94), Expect = 8e-04
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF 350
H D NL+ + +D G + AI+ + + + + Y +D
Sbjct: 197 HGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGID- 255
Query: 351 LSPDVDVTPIVPALRNFF 368
+PD++ L FF
Sbjct: 256 -NPDMNKLQFHLMLDEFF 272
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 487 | |||
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.97 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.97 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 99.97 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 99.97 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 99.97 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.97 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.96 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 99.96 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.96 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.96 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.96 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.95 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.95 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.95 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.95 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.95 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.95 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.95 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.95 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.95 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.95 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.95 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.95 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.95 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.95 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.95 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.95 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.95 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.95 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.94 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.94 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.94 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.94 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.94 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.94 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.94 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.94 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.94 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.94 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.94 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.94 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.94 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.94 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.94 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.94 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.94 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.94 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.94 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.94 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.94 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.94 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.94 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.94 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.94 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.94 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.94 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.94 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.94 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.94 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.94 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.93 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.93 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.93 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.93 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.93 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.93 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.93 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.93 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.93 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.93 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.93 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.93 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.93 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.93 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.93 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.93 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.93 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.93 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.93 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.93 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.93 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.93 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.93 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.93 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.93 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.93 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.93 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.93 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.93 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.93 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.93 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.93 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.93 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.93 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.93 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.93 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.93 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.93 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.93 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.92 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.92 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.92 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.92 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.92 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.92 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.92 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.92 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.92 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.92 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.92 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.92 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.92 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.92 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.92 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.92 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.92 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.92 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.92 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.92 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.92 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.92 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.92 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.92 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.92 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.92 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.92 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.92 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.92 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.92 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.91 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.91 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.91 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.91 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.91 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.91 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.91 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.91 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.91 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.91 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.91 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.91 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.91 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.91 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.91 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.91 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.91 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.91 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.91 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.91 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.91 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.9 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.9 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.9 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.9 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.9 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.9 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.9 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.9 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.9 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.9 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.9 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.9 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.9 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.9 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.9 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.9 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.9 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.9 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.9 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.9 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.9 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.9 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.89 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.89 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.89 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.89 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.89 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.89 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.89 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.89 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.89 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.89 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.89 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.89 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.89 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.89 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.89 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.89 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.89 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.89 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.89 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.89 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.89 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.89 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.89 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.89 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.89 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.89 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.88 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.88 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.88 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.88 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.88 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.88 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.88 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.88 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.88 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.88 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.88 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.88 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.88 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.88 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.88 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.88 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.88 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.88 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.88 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.88 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.88 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.88 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.88 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.87 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.87 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.87 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.87 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.87 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.87 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.87 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.87 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.87 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.86 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.86 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.86 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.86 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.86 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.86 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.85 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.82 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.82 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.81 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.78 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.75 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.32 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.21 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.16 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 99.0 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.95 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.89 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.82 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.78 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.74 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.72 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.63 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.56 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.51 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.45 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 98.38 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 98.28 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 98.23 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 98.22 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 98.16 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 98.15 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.76 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.68 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.66 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.34 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 97.13 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 96.83 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 87.62 |
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=320.11 Aligned_cols=257 Identities=21% Similarity=0.223 Sum_probs=178.7
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC---hHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG---IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~---~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
..+.|+.+ +.||+|+||+||+|+++.+|+.||||++... ..+.+..++.+|+ ...|+||+++++.
T Consensus 72 p~~~y~~~--~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~----------~l~HpnIV~l~~~ 139 (346)
T 4fih_A 72 PRSYLDNF--IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR----------DYQHENVVEMYNS 139 (346)
T ss_dssp GGGTEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHH----------HCCCTTBCCEEEE
T ss_pred hhHhcEEe--EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHH----------hCCCCCCCcEEEE
Confidence 34567777 6799999999999999999999999998532 1111222222221 1124444443331
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCS 280 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~ 280 (487)
....+..|||||||+||+|.++.......+.....+..+++.|
T Consensus 140 -------------------------------------~~~~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~a 182 (346)
T 4fih_A 140 -------------------------------------YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQA 182 (346)
T ss_dssp -------------------------------------EEETTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------EEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 1224567899999999999988554334444556667889999
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
|.|||++||+||||||+|||++.+|.+||+|||+++.+.... ..+++ +++.+++++++...-+++++|+|
T Consensus 183 L~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~--------GTp~YmAPEvl~~~~y~~~~DiW 254 (346)
T 4fih_A 183 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV--------GTPYWMAPELISRLPYGPEVDIW 254 (346)
T ss_dssp HHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCC--------SCGGGCCHHHHTTCCBCTHHHHH
T ss_pred HHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccc--------cCcCcCCHHHHCCCCCCcHHHHH
Confidence 999999999999999999999999999999999998875431 11222 33444555555545558899999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
|+||.+++|+++. .|+.+.+...++..+. . ...|.+..
T Consensus 255 SlGvilyeml~G~--~PF~~~~~~~~~~~i~---~-------------------------~~~~~~~~------------ 292 (346)
T 4fih_A 255 SLGIMVIEMVDGE--PPYFNEPPLKAMKMIR---D-------------------------NLPPRLKN------------ 292 (346)
T ss_dssp HHHHHHHHHHHSS--CTTTTSCHHHHHHHHH---H-------------------------SSCCCCSC------------
T ss_pred HHHHHHHHHHHCC--CCCCCcCHHHHHHHHH---c-------------------------CCCCCCCc------------
Confidence 9999999999853 4555444333222211 1 11122211
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
....++++++.+.+||.+||++|++..+.+.|+||.-..-|
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p 333 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 333 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence 11357899999999999999999999999999999754433
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=322.32 Aligned_cols=257 Identities=20% Similarity=0.217 Sum_probs=180.3
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCCh---HHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGI---EEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~---~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
..+.|+.+ +.||+|+||.||+|+++.+|+.||||++.... .+.+..++.+|+. +.|+||+++++.
T Consensus 149 p~~~y~~~--~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~----------l~HpnIV~l~~~ 216 (423)
T 4fie_A 149 PRSYLDNF--IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD----------YQHENVVEMYNS 216 (423)
T ss_dssp GGGTEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHH----------CCCTTBCCEEEE
T ss_pred hhHhcEee--eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHh----------CCCCCCCceEEE
Confidence 34557766 67999999999999999999999999986331 1122222222221 224444444332
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCS 280 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~ 280 (487)
+ ...+..|||||||+||+|.++.............+..+++.|
T Consensus 217 ~-------------------------------------~~~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~a 259 (423)
T 4fie_A 217 Y-------------------------------------LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQA 259 (423)
T ss_dssp E-------------------------------------EETTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred E-------------------------------------EECCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 1 223567899999999999988654444444556677889999
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
|.|||++||+||||||+|||++.+|.+||+|||+++.+.... ..+++ +.+.+++++++.-.-+++++|+|
T Consensus 260 L~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~--------GTp~YmAPEvl~~~~y~~~~DiW 331 (423)
T 4fie_A 260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV--------GTPYWMAPELISRLPYGPEVDIW 331 (423)
T ss_dssp HHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCE--------ECTTTCCHHHHTTCCBCTHHHHH
T ss_pred HHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccc--------cCcCcCCHHHHCCCCCCcHHHHH
Confidence 999999999999999999999999999999999998875431 11222 34455555555555568899999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
|+||.+++|+++. .|+.+.+...++..+. ....|.+..
T Consensus 332 SlGvilyeml~G~--~PF~~~~~~~~~~~i~----------------------------~~~~~~~~~------------ 369 (423)
T 4fie_A 332 SLGIMVIEMVDGE--PPYFNEPPLKAMKMIR----------------------------DNLPPRLKN------------ 369 (423)
T ss_dssp HHHHHHHHHHHSS--CTTTTSCHHHHHHHHH----------------------------HSCCCCCSC------------
T ss_pred HHHHHHHHHHHCC--CCCCCcCHHHHHHHHH----------------------------cCCCCCCcc------------
Confidence 9999999999853 4554444333222111 111122111
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
....++++++++.+||.+||++|++..+.+.|+||.-..-|
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p 410 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 410 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCC
Confidence 12457899999999999999999999999999999755443
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=309.06 Aligned_cols=249 Identities=13% Similarity=0.121 Sum_probs=165.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++...... .+.+. +.+.+..+..+.|+||+++++.
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~--~~~~~---~~~E~~il~~l~HpnIV~~~~~------------- 91 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS--KEREE---SRREVAVLANMKHPNIVQYRES------------- 91 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCH--HHHHH---HHHHHHHHHHCCCTTBCCEEEE-------------
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH--HHHHH---HHHHHHHHHHCCCCCCCcEEEE-------------
Confidence 67999999999999999899999999997542111 01111 1111111111224444433321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC-CCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG-LKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
+ +..+..|||||||+||+|.+++...... .+. ...+..+++.||.|||++||+
T Consensus 92 -----------------------~-~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~Ii 147 (350)
T 4b9d_A 92 -----------------------F-EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147 (350)
T ss_dssp -----------------------E-EETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred -----------------------E-EECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 1 2245678999999999999886543322 343 445678899999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||||+|||++.+|.+||+|||+++.+...... ... ..+++.+++++++.-.-+++++|+||+||.+++++++
T Consensus 148 HRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~~~-----~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG 221 (350)
T 4b9d_A 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL-ARA-----CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTL 221 (350)
T ss_dssp ETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH-HHH-----HHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred eccCCHHHEEECCCCCEEEcccccceeecCCccc-ccc-----cCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999999998765321 111 1233444445555444457889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+...++..+.. .. . |.. ....++++++.+
T Consensus 222 ~--~PF~~~~~~~~~~~i~~---~~---~----------------------~~~--------------~~~~s~~~~~li 257 (350)
T 4b9d_A 222 K--HAFEAGSMKNLVLKIIS---GS---F----------------------PPV--------------SLHYSYDLRSLV 257 (350)
T ss_dssp S--CSCCCSSHHHHHHHHHH---TC---C----------------------CCC--------------CTTSCHHHHHHH
T ss_pred C--CCCCCcCHHHHHHHHHc---CC---C----------------------CCC--------------CccCCHHHHHHH
Confidence 3 56666665544433321 00 0 100 113477889999
Q ss_pred HHHHhhcCcccccccchhhccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+||.+||++|++..+.+.|+||.
T Consensus 258 ~~~L~~dP~~R~s~~e~l~hp~~~ 281 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILEKGFIA 281 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred HHHccCChhHCcCHHHHhcCHHhh
Confidence 999999999999999999999984
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-38 Score=308.05 Aligned_cols=255 Identities=14% Similarity=0.056 Sum_probs=171.1
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+-. +.||+|+||+||+|+++.+|+.||||++.+..... -..++.+.+..+.+....|+|++++++.
T Consensus 34 y~i~--~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~----~~~~~~~~~E~~il~~l~HpnIv~l~~~------- 100 (311)
T 4aw0_A 34 FKFG--KILGEGSFSTVVLARELATSREYAIKILEKRHIIK----ENKVPYVTRERDVMSRLDHPFFVKLYFT------- 100 (311)
T ss_dssp EEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHTTCCCTTBCCEEEE-------
T ss_pred cEEE--EEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEE-------
Confidence 5544 78999999999999999999999999986321100 0001111111111112224444333321
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
.+..+..|||||||+||+|.++.... ...+.....+..++..||.|||+
T Consensus 101 ------------------------------~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~ 150 (311)
T 4aw0_A 101 ------------------------------FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150 (311)
T ss_dssp ------------------------------EECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------EEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 12245678999999999999875432 23344566777899999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
+||+||||||+|||++.+|.+||+|||+++.+.......... ...+++.+++++++.-...++++|+||+|+.+++
T Consensus 151 ~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~----~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilye 226 (311)
T 4aw0_A 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN----SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226 (311)
T ss_dssp TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBC----CCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHH
T ss_pred CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccccc----CcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999875432211000 0113344444444444445788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
|+++. .|+...+...+...+.. .++.+. ...++++
T Consensus 227 ml~G~--~PF~~~~~~~~~~~i~~-----------------------------~~~~~p--------------~~~s~~~ 261 (311)
T 4aw0_A 227 LVAGL--PPFRAGNEGLIFAKIIK-----------------------------LEYDFP--------------EKFFPKA 261 (311)
T ss_dssp HHHSS--CSSCCSSHHHHHHHHHH-----------------------------TCCCCC--------------TTCCHHH
T ss_pred HHhCC--CCCCCCCHHHHHHHHHc-----------------------------CCCCCC--------------cccCHHH
Confidence 99854 46655554444333221 111111 1347889
Q ss_pred HHHHHHHHhhcCcccccccch------hhccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSP------FTINLVD 474 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~------~~~~~~~ 474 (487)
++.+.+||.+||++|++..+. ..|+||+
T Consensus 262 ~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~ 295 (311)
T 4aw0_A 262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295 (311)
T ss_dssp HHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGT
T ss_pred HHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcC
Confidence 999999999999999998775 5789984
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=307.80 Aligned_cols=340 Identities=15% Similarity=0.128 Sum_probs=187.5
Q ss_pred hhhhHHHHHHHHHHHhcChHHH-HHHHHhhcCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCC
Q 011399 55 QNKRKRAAELRRIFTRLGPTFV-KLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISP 133 (487)
Q Consensus 55 ~~~~~~~~~l~~~l~~lg~~~i-K~gQ~ls~r~d~~p~~~~~~l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~ 133 (487)
..+.++|+++.+.+.++++.++ +++|.++..++..+ +++.+++++|+.+|+.+.+.+...++.+++.+..+.|..|..
T Consensus 16 ~~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (365)
T 2y7j_A 16 NKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSA-NLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQ 94 (365)
T ss_dssp -------------------------------------------------------------------CBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCccchhcccccccccccCCCchhH-HHHHHHHhhhhcCCCCccccccccCCchhhcccchhhhhhhh
Confidence 3456789999999999999998 88999988887654 467789999999999999999999999999998888877765
Q ss_pred -----cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 -----SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 -----~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
++||+|+||+||+|+++.+|+.||||+++++.......+ ..++.+.+.+|
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~-------------------------~~~~~~~~~~E 149 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQ-------------------------LEEVREATRRE 149 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHH-------------------------HHHHHHHHHHH
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHH-------------------------HHHHHHHHHHH
Confidence 899999999999999988999999999987642211111 12233334444
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (487)
+++..+ + .+++++..+..++..++..++||||++|++|.++.... ...+ ....+..++..+|.|||+
T Consensus 150 ~~~l~~------l----~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~ 218 (365)
T 2y7j_A 150 THILRQ------V----AGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHA 218 (365)
T ss_dssp HHHHHH------H----TTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH------h----cCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 443322 2 24667766777777788899999999999998875432 2333 344566788899999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY-ALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~Di~sl~~~l~ 365 (487)
.|++|+||||+||+++.+|.++|+|||+++.+...... .....+..+..||.+..... .....+.++|+||+|+.++
T Consensus 219 ~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ 296 (365)
T 2y7j_A 219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL--RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296 (365)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCB--CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHH
T ss_pred CCeecCCCCHHHEEECCCCCEEEEecCcccccCCCccc--ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHH
Confidence 99999999999999999999999999999877643211 00111223444554321110 0123467899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++. .|+...+.......+.. + ...+.. | .....++.
T Consensus 297 ell~g~--~pf~~~~~~~~~~~i~~------------------------~-----~~~~~~-----~-----~~~~~~~~ 335 (365)
T 2y7j_A 297 TLLAGS--PPFWHRRQILMLRMIME------------------------G-----QYQFSS-----P-----EWDDRSST 335 (365)
T ss_dssp HHHHSS--CSSCCSSHHHHHHHHHH------------------------T-----CCCCCH-----H-----HHSSSCHH
T ss_pred HHHHCC--CCCCCCCHHHHHHHHHh------------------------C-----CCCCCC-----c-----ccccCCHH
Confidence 999843 34433332221111110 0 001100 0 11245788
Q ss_pred HHHHHHHHHhhcCcccccccchhhccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+++.+.+||..||..|++..+.+.|+||+
T Consensus 336 ~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 336 VKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 99999999999999999999999999996
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=296.13 Aligned_cols=252 Identities=14% Similarity=0.137 Sum_probs=158.5
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+-. +.||+|+||+||+|+++.+|+.||||++++.....-. ....
T Consensus 15 Y~i~--~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~------------------------------~~~~--- 59 (275)
T 3hyh_A 15 YQIV--KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD------------------------------MQGR--- 59 (275)
T ss_dssp CEEE--EEEEC---CCEEEEECTTTCCEEEEEEEECC------------------------------------CHHH---
T ss_pred eEEE--EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHH------------------------------HHHH---
Confidence 4444 7899999999999999989999999999754221100 0011
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh 285 (487)
+.+|.+.+.++ ++++| .+-.+ .+..+..||||||| ||+|.+..... .........+..++..|++|+|
T Consensus 60 ---~~~Ei~il~~l-----~HpnIv~~~~~-~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH 129 (275)
T 3hyh_A 60 ---IEREISYLRLL-----RHPHIIKLYDV-IKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129 (275)
T ss_dssp ---HHHHHHHHHHC-----CCTTBCCEEEE-EECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHC-----CCCCCCeEEEE-EEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22222222222 12221 11111 22345678999999 55776654321 2233455667788999999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
++||+||||||+|||++.+|.+||+|||+++...+... .+.+| +..+..||.+. ..++.++++|+||+|+.+
T Consensus 130 ~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~G---T~~Y~APE~~~----~~~y~~~~~DiwSlGvil 202 (275)
T 3hyh_A 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVIS----GKLYAGPEVDVWSCGVIL 202 (275)
T ss_dssp HTTCCCCCCCTTTEEECTTCCEEECCSSCC------------------CTTSCHHHHS----SSSCCCTHHHHHHHHHHH
T ss_pred HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeE---CcccCChhhhc----CCCCCCChhhhHHHHHHH
Confidence 99999999999999999999999999999988765432 22233 33444444431 234556789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++++++. .|+.+.+...+...+.. .. +.+ ....++
T Consensus 203 y~lltg~--~PF~~~~~~~~~~~i~~----~~-------------------------~~~--------------p~~~s~ 237 (275)
T 3hyh_A 203 YVMLCRR--LPFDDESIPVLFKNISN----GV-------------------------YTL--------------PKFLSP 237 (275)
T ss_dssp HHHHHSS--CSSCCSSHHHHHHHHHH----TC-------------------------CCC--------------CTTSCH
T ss_pred HHHHHCC--CCCCCCCHHHHHHHHHc----CC-------------------------CCC--------------CCCCCH
Confidence 9999854 45555554443322211 00 111 013478
Q ss_pred HHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
++++.+.+||.+||.+|++..+.+.|+||..+
T Consensus 238 ~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 238 GAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 89999999999999999999999999999654
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=301.09 Aligned_cols=296 Identities=15% Similarity=0.136 Sum_probs=178.2
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|+.. +.||+|+||+||+|+++.+|+.||||+++......-. -..+++++ +.+..+.|+|++.+++.+.
T Consensus 54 ~~Y~~~--~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~-~~~~~~Ei----~il~~l~HpnIv~l~~~~~--- 123 (398)
T 4b99_A 54 DEYEII--ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN-AKRTLREL----KILKHFKHDNIIAIKDILR--- 123 (398)
T ss_dssp SSEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHH-HHHHHHHH----HHHHHCCCTTBCCEEEECC---
T ss_pred CCeEEE--EEEecccCeEEEEEEECCCCCEEEEEEECccccchHH-HHHHHHHH----HHHHhcCCCCcceEeeeee---
Confidence 335544 6899999999999999999999999999643211100 00111111 1111122444444332110
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~l 284 (487)
...........|||||||+| +|.++... ..........+..+++.||.||
T Consensus 124 ----------------------------~~~~~~~~~~~~ivmE~~~g-~L~~~i~~~~~l~~~~~~~~~~qil~al~yl 174 (398)
T 4b99_A 124 ----------------------------PTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYM 174 (398)
T ss_dssp ----------------------------CSSCTTTCCCEEEEEECCSE-EHHHHHTSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------cccccccCCEEEEEEeCCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 00000112456899999975 56655321 1223345667788999999999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH---HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA---IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
|++||+||||||+|||++.+|.+||+|||+++.+....... ....+++..+..||.+ ....+.+.++|+||+|
T Consensus 175 H~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~----~~~~~~~~~~DiWSlG 250 (398)
T 4b99_A 175 HSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM----LSLHEYTQAIDLWSVG 250 (398)
T ss_dssp HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHH----TTCSCCCTHHHHHHHH
T ss_pred HHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHh----cCCCCCCChhheehhH
Confidence 99999999999999999999999999999999875432110 0111222334444432 2234668889999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
|.+++|+++. .++.+.+....+..+.......+....... ... ........+ |.... .|+ ..+...
T Consensus 251 ~il~ell~G~--~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~----~~~-~~~~~~~~~-~~~~~----~~~--~~~~~~ 316 (398)
T 4b99_A 251 CIFGEMLARR--QLFPGKNYVHQLQLIMMVLGTPSPAVIQAV----GAE-RVRAYIQSL-PPRQP----VPW--ETVYPG 316 (398)
T ss_dssp HHHHHHHHTS--CSSCCSSHHHHHHHHHHHHCCCCGGGTC----------CHHHHHHSS-CCCCC----CCH--HHHSTT
T ss_pred HHHHHHHHCC--CCCCCCCHHHHHHHHHHhcCCCChHHhhhh----hhh-hhhhhhhcC-CCcCC----CCH--HHhCCC
Confidence 9999999854 466666665555555544432211111110 000 000001111 11111 011 233446
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFV 478 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~ 478 (487)
.++++++++.+||.+||++|++..+.+.|+||.--..
T Consensus 317 ~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 353 (398)
T 4b99_A 317 ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353 (398)
T ss_dssp CCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred CCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence 7899999999999999999999999999999965433
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-36 Score=297.24 Aligned_cols=250 Identities=15% Similarity=0.104 Sum_probs=165.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++..... ..++ ..+..+.||||+++++.+
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--~~E~----------~il~~l~HpnIV~l~~~~------------ 119 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--VEEL----------VACAGLSSPRIVPLYGAV------------ 119 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--THHH----------HTTTTCCCTTBCCEEEEE------------
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--HHHH----------HHHHhCCCCCCCcEEEEE------------
Confidence 5699999999999999999999999999754221 1111 122233466666554422
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+.....|||||||+||+|.++.... .........+..+++.||.|||++||+||
T Consensus 120 -------------------------~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHR 174 (336)
T 4g3f_A 120 -------------------------REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 174 (336)
T ss_dssp -------------------------EETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECS
T ss_pred -------------------------EECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 1234568999999999999986432 22334455667889999999999999999
Q ss_pred CCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 293 DPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 293 Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||||+|||++.+| ++||+|||+++.+.......-. .......+++.+++++++.-.-+++++|+||+||.+++|+++.
T Consensus 175 DlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~ 253 (336)
T 4g3f_A 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL-LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253 (336)
T ss_dssp CCCGGGEEECTTSCCEEECCCTTCEEC-------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccce-ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCc
Confidence 9999999999988 6999999999988654211100 0001123456666666665555688999999999999999854
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.|+.+.+...+...+.. . .|.+ ..+....++.+++.+.
T Consensus 254 --~Pf~~~~~~~~~~~i~~---~--------------------------~~~~-----------~~~~~~~s~~~~~li~ 291 (336)
T 4g3f_A 254 --HPWTQYFRGPLCLKIAS---E--------------------------PPPI-----------REIPPSCAPLTAQAIQ 291 (336)
T ss_dssp --CSSTTTCCSCCHHHHHH---S--------------------------CCGG-----------GGSCTTSCHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHc---C--------------------------CCCc-----------hhcCccCCHHHHHHHH
Confidence 34433322111111110 0 0000 0112245678888888
Q ss_pred HHHhhcCcccccccc-------------hhhcccccc
Q 011399 452 ELLFKDGRFRHVLYS-------------PFTINLVDF 475 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~-------------~~~~~~~~~ 475 (487)
+||.+||..|++..+ ++.|||+.-
T Consensus 292 ~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~ 328 (336)
T 4g3f_A 292 EGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE 328 (336)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred HHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence 888888888887654 567999854
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=290.46 Aligned_cols=265 Identities=18% Similarity=0.127 Sum_probs=168.4
Q ss_pred CCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 121 g~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
|...+..|-.|+ +.||+|+||.||+|+++.+|+.||||++....... .+.+ .+.+.++.+..+.||||+++++.
T Consensus 20 ~~~~~gr~~~~~-~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~~~~---~~~~E~~il~~l~HpnIV~~~~~ 93 (290)
T 3fpq_A 20 GMSNDGRFLKFD-IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SERQ---RFKEEAEMLKGLQHPNIVRFYDS 93 (290)
T ss_dssp EECTTSSEEEEE-EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHHH---HHHHHHHHHHTCCCTTBCCEEEE
T ss_pred CcCCCCceEEee-eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH--HHHH---HHHHHHHHHHhCCCCCCCcEEEE
Confidence 333344444454 46999999999999999899999999986432111 0111 11111111222234444443331
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQC 279 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~ 279 (487)
+.. ........+||||||+||+|.++.... .........+..+++.
T Consensus 94 ~~~---------------------------------~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~ 140 (290)
T 3fpq_A 94 WES---------------------------------TVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILK 140 (290)
T ss_dssp EEE---------------------------------EETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred Eee---------------------------------ccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 100 000112358999999999999885432 1223344456788999
Q ss_pred HHHHHHHCC--ccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 280 SLRQLLEYG--YFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 280 ~l~~lh~~g--ivH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
||.|||++| |+||||||+|||++ ++|.+||+|||+|+........+++| ++.+++++++. +-+++++|
T Consensus 141 aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~G--------Tp~YmAPE~~~-~~y~~~~D 211 (290)
T 3fpq_A 141 GLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIG--------TPEFMAPEMYE-EKYDESVD 211 (290)
T ss_dssp HHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCS--------SCCCCCGGGGG-TCCCTHHH
T ss_pred HHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCccc--------CccccCHHHcC-CCCCcHHH
Confidence 999999999 99999999999998 58999999999998655432222233 33334444443 34588899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFA 435 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~ 435 (487)
+||+|+.+++++++. .|+.+.+ ...+...+ . ....|.
T Consensus 212 iwSlGvilyelltg~--~Pf~~~~~~~~~~~~i----~------------------------~~~~~~------------ 249 (290)
T 3fpq_A 212 VYAFGMCMLEMATSE--YPYSECQNAAQIYRRV----T------------------------SGVKPA------------ 249 (290)
T ss_dssp HHHHHHHHHHHHHSS--CTTTTCSSHHHHHHHH----T------------------------TTCCCG------------
T ss_pred HHHHHHHHHHHHHCC--CCCCCCCcHHHHHHHH----H------------------------cCCCCC------------
Confidence 999999999999853 3443322 22211111 0 000010
Q ss_pred HHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 436 KRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 436 ~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
......+|++++.+.+||.+||+.|++..+.+.|+||.-+
T Consensus 250 -~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 250 -SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp -GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred -CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 0112357889999999999999999999999999999754
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=295.16 Aligned_cols=252 Identities=16% Similarity=0.143 Sum_probs=167.6
Q ss_pred hcccCCcccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
|+-. +.||+|+||+||+|+.. .+|+.||||++++.....- +. ..+....+.+....|||++++++.
T Consensus 26 Y~i~--~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~--~~---~~~~~E~~il~~l~HpnIv~l~~~---- 94 (304)
T 3ubd_A 26 FELL--KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--DR---VRTKMERDILVEVNHPFIVKLHYA---- 94 (304)
T ss_dssp EEEE--EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE--EC---C------CCCCCCCCTTEECEEEE----
T ss_pred cEEE--EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH--HH---HHHHHHHHHHHHCCCCCCCeEEEE----
Confidence 5544 78999999999999874 3678999999864321100 00 001111112222334444443332
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~ 283 (487)
.+..+..|||||||+||+|.++.... .........+..++..||.|
T Consensus 95 ---------------------------------~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~y 141 (304)
T 3ubd_A 95 ---------------------------------FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141 (304)
T ss_dssp ---------------------------------EEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------EEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 12245678999999999998875432 22334455667889999999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+|++||+||||||+|||++.+|.+||+|||+++......... ....+++.+++++.......++++|+||+|+.
T Consensus 142 lH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~------~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvi 215 (304)
T 3ubd_A 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA------YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVL 215 (304)
T ss_dssp HHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCC------CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred HHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccc------cccccCcccCCHHHhccCCCCCCCcccchHHH
Confidence 999999999999999999999999999999998764332110 01223455555555555566889999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++. .|+.+.+...++..+.. .....| ...+
T Consensus 216 lyemltG~--~PF~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~s 250 (304)
T 3ubd_A 216 MFEMLTGT--LPFQGKDRKETMTMILK----AKLGMP---------------------------------------QFLS 250 (304)
T ss_dssp HHHHHHSS--CSSCCSSHHHHHHHHHH----CCCCCC---------------------------------------TTSC
T ss_pred HHHHHhCC--CCCCCcCHHHHHHHHHc----CCCCCC---------------------------------------CcCC
Confidence 99999853 56666555444333211 111111 1347
Q ss_pred HHHHHHHHHHHhhcCccccccc-----chhhccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLY-----SPFTINLVD 474 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~-----~~~~~~~~~ 474 (487)
+++++.+.+||.+||..|++.. +.+.|+||.
T Consensus 251 ~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~ 286 (304)
T 3ubd_A 251 PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS 286 (304)
T ss_dssp HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGT
T ss_pred HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcccc
Confidence 8899999999999999999963 678899994
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=289.36 Aligned_cols=268 Identities=16% Similarity=0.119 Sum_probs=159.9
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|+||+||+|+++.+|+.||||+++....+... ..+.+.+..+....|||++++++.+...-..
T Consensus 7 y~~~--~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~------~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~ 78 (299)
T 4g31_A 7 FEPI--QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR------EKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78 (299)
T ss_dssp EEEE--EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHH------HHHHHHHHHHTTCCCTTBCCEEEEEEEEC--
T ss_pred CEEe--eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHH------HHHHHHHHHHHhCCCCCCCeEEEEEEecCcc
Confidence 4444 7899999999999999989999999998643221110 1111222222334577776665532110000
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc--CCC--HHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--GLK--VLDLVNTGIQCSLRQ 283 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--~~~--~~~~~~~~i~~~l~~ 283 (487)
+ .+. . .......|||||||+|++|.++...... ..+ ....+..++..||.|
T Consensus 79 ~-----------~~~-~-------------~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~y 133 (299)
T 4g31_A 79 E-----------KLQ-P-------------SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEF 133 (299)
T ss_dssp ---------------------------------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred c-----------ccc-c-------------cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHH
Confidence 0 000 0 0001124799999999999887532111 112 234466789999999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH------HHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG------HVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
||++||+||||||+|||++.+|.+||+|||+|+.++......... ...+...+++.+++++.+.-.-+++++|+
T Consensus 134 lH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~Di 213 (299)
T 4g31_A 134 LHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDI 213 (299)
T ss_dssp HHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHH
T ss_pred HHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHH
Confidence 999999999999999999999999999999999886543211100 00111234555566666655556889999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++. |+... ......+..+ . ....|+. .
T Consensus 214 wSlGvilyell~-----Pf~~~--~~~~~~~~~~-~--~~~~p~~-------------------------------~--- 249 (299)
T 4g31_A 214 FSLGLILFELLY-----PFSTQ--MERVRTLTDV-R--NLKFPPL-------------------------------F--- 249 (299)
T ss_dssp HHHHHHHHHHHS-----CCSSH--HHHHHHHHHH-H--TTCCCHH-------------------------------H---
T ss_pred HHHHHHHHHHcc-----CCCCc--cHHHHHHHHH-h--cCCCCCC-------------------------------C---
Confidence 999999999985 32211 0111111110 0 1111211 0
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+.+|..++.+.+||.+||..|++..+.+.|+||+
T Consensus 250 --~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 284 (299)
T 4g31_A 250 --TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE 284 (299)
T ss_dssp --HHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGC
T ss_pred --cccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence 11256778899999999999999999999999995
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=295.29 Aligned_cols=294 Identities=15% Similarity=0.129 Sum_probs=170.2
Q ss_pred HHhhhcccCCcccccccccEEEEEEEc---cCCcEEEEEEecCChH-HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIE-EAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~-~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~ 199 (487)
+.+.|+-. +.||+|+||+||+|+++ .+++.||||++.+... ..+..++++++.+ ..|+|++.+.+
T Consensus 19 l~~~Y~i~--~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~---------~~h~nIv~l~~ 87 (361)
T 4f9c_A 19 LSNVFKIE--DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA---------GGQDNVMGVKY 87 (361)
T ss_dssp GGGTCEEE--EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHT---------CSBTTBCCCSE
T ss_pred ccCcEEEE--EEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHh---------cCCCCCceEEE
Confidence 34456555 68999999999999875 3578999998865421 1111111111110 01333333322
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHH
Q 011399 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQC 279 (487)
Q Consensus 200 ~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~ 279 (487)
+.+..+..|||||||+|++|.++ .+.......+.+..|+..
T Consensus 88 -------------------------------------~~~~~~~~~lvmE~~~g~~L~~~--~~~l~~~~~~~~~~qll~ 128 (361)
T 4f9c_A 88 -------------------------------------CFRKNDHVVIAMPYLEHESFLDI--LNSLSFQEVREYMLNLFK 128 (361)
T ss_dssp -------------------------------------EEEETTEEEEEEECCCCCCHHHH--HTTCCHHHHHHHHHHHHH
T ss_pred -------------------------------------EEEECCEEEEEEeCCCcccHHHH--HcCCCHHHHHHHHHHHHH
Confidence 12234667899999999999887 345556667788899999
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCC-CcEEEEecCCCCCCCHHH--------------H--HHHHH------HHHHHHhc
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEA--------------R--FAIIG------HVVHMVNR 336 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~-g~i~l~DFGla~~l~~~~--------------~--~~~~~------~~~~~~~~ 336 (487)
||+|||++||+||||||+|||++.+ |.+||+|||+|+...+.. + ...+. ...+...+
T Consensus 129 al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 208 (361)
T 4f9c_A 129 ALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAG 208 (361)
T ss_dssp HHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCC
T ss_pred HHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999876 899999999997543210 0 00000 00011123
Q ss_pred CHHHHHHHHHH-cCCCCCCCCcchHHHHHHHHHHHhccCCCC-cCcHHHHHHHHHHHHhh---------------CCCCC
Q 011399 337 DYEAMARDYYA-LDFLSPDVDVTPIVPALRNFFDDALNSSVS-ELNFKTIVDGLGAVLYQ---------------YPFNV 399 (487)
Q Consensus 337 ~~~~~~~~~~~-~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~---------------~~~~~ 399 (487)
++.++++++.. ....+.++|+||+||.+++|+++.. |+. ..+-...+..+..++-. .....
T Consensus 209 T~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~--Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~ 286 (361)
T 4f9c_A 209 TPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY--PFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEV 286 (361)
T ss_dssp CGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS--SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCC
T ss_pred CccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccC
Confidence 44445555442 2346788999999999999998643 331 22222222222221110 00011
Q ss_pred Ch-HHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 400 PA-YYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 400 p~-~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
|. ....+...+ .+. ....|.+....... ..........++++++++.+||..||++|++..+++.||||+
T Consensus 287 p~~~~~~~~~~~---~~~-~~~~p~~~~~~~~~-~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~ 357 (361)
T 4f9c_A 287 PAQDLRKLCERL---RGM-DSSTPKLTSDIQGH-ATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFK 357 (361)
T ss_dssp CCCCHHHHHHHH---C------------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGT
T ss_pred cchhhhHHHHhh---ccc-cccccccccccccc-cccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence 11 111111111 000 00011110000000 000112245789999999999999999999999999999996
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=313.00 Aligned_cols=253 Identities=14% Similarity=0.100 Sum_probs=167.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||++++..... .............+..+....||+|+.+++
T Consensus 195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~-~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~-------------- 259 (689)
T 3v5w_A 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMSY-------------- 259 (689)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHSSSCCTTBCCEEE--------------
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch-hhhHHHHHHHHHHHHHHhhCCCCCEeEEEE--------------
Confidence 77999999999999999999999999996321110 000000011111111111112222222211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
..+..+..|||||||+||+|.+++... .........+..++..||.|||++||+||
T Consensus 260 -----------------------~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHR 316 (689)
T 3v5w_A 260 -----------------------AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316 (689)
T ss_dssp -----------------------EEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred -----------------------EEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 122345679999999999998875432 23345567788999999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHHHHh
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||||+|||++.+|.+||+|||+|+.+......++ .+++.+++++++.-| .++.++|+||+||.+++|+++.
T Consensus 317 DLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~--------~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~ 388 (689)
T 3v5w_A 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388 (689)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECSSCCCCSC--------CSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCchHHeEEeCCCCEEecccceeeecCCCCCCCc--------cCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999988765433222 345666777766443 4588899999999999999854
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.|+.+.+... ...+........ +.+ ....++++++.+.
T Consensus 389 --~PF~~~~~~~-~~~i~~~i~~~~-------------------------~~~--------------p~~~S~~a~dLI~ 426 (689)
T 3v5w_A 389 --SPFRQHKTKD-KHEIDRMTLTMA-------------------------VEL--------------PDSFSPELRSLLE 426 (689)
T ss_dssp --CTTCGGGCCC-HHHHHHHHHHCC-------------------------CCC--------------CTTSCHHHHHHHH
T ss_pred --CCCCCCChHH-HHHHHHhhcCCC-------------------------CCC--------------CccCCHHHHHHHH
Confidence 3443221100 001111111111 111 1135788999999
Q ss_pred HHHhhcCcccccc-----cchhhccccc
Q 011399 452 ELLFKDGRFRHVL-----YSPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~r~~~-----~~~~~~~~~~ 474 (487)
+||.+||++|++. .+...|+||.
T Consensus 427 ~lL~~dP~~Rl~~~~~ga~ei~~HpfF~ 454 (689)
T 3v5w_A 427 GLLQRDVNRRLGCLGRGAQEVKESPFFR 454 (689)
T ss_dssp HHTCSCGGGCTTCSSSTHHHHTTSGGGT
T ss_pred HHccCCHhHCCCCCCCCHHHHhcCcccc
Confidence 9999999999983 5788999994
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-33 Score=294.57 Aligned_cols=305 Identities=15% Similarity=0.120 Sum_probs=200.3
Q ss_pred HHHHhhcCCCCCCH----HHHHHHH---------------------HhhcCCCCCCHHHHHHH----HHHHhCCCHHhhh
Q 011399 78 LGQGLSTRPDICPP----EYLEELS---------------------ELQDALPTFPDAEAFSC----IERELGLTLDSIF 128 (487)
Q Consensus 78 ~gQ~ls~r~d~~p~----~~~~~l~---------------------~lqd~~~~~~~~~~~~~----i~~~lg~~~~~~f 128 (487)
+||+++|++|++|+ +.+++++ +++|.+++++.+.+..+ .+..++..+++++
T Consensus 72 ~~~f~~t~~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v~~~~~~~l~~~~~~~~~ 151 (543)
T 3c4z_A 72 FQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVL 151 (543)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHHHCC---CTTHHHHHHHH
T ss_pred HHHHHhcCCchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhhhcCCCchhhHHHHHHHH
Confidence 48899999999999 7888888 88999999998877666 3333333333333
Q ss_pred cccCC----------------------------------cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHH
Q 011399 129 SSISP----------------------------------SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFY 174 (487)
Q Consensus 129 ~~~~~----------------------------------~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~ 174 (487)
..++. +.||+|+||+||+|+++.+|+.||||++++.....
T Consensus 152 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~------ 225 (543)
T 3c4z_A 152 AHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK------ 225 (543)
T ss_dssp HHHTTHHHHHHHTSHHHHHHHHHHHHHTSCCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH------
T ss_pred HhhhcCchHhhhhhhhhhhhhhhhhhhcccCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh------
Confidence 33333 34999999999999998899999999986321100
Q ss_pred HHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCC
Q 011399 175 LIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGV 254 (487)
Q Consensus 175 ~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~ 254 (487)
... .-.+..|.+.+.++ +++.+.-...+....+..++||||++|+
T Consensus 226 ----------------~~~--------------~~~~~~E~~iL~~l-----~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 226 ----------------RKG--------------YQGAMVEKKILAKV-----HSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp ----------------TTC--------------HHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred ----------------hHH--------------HHHHHHHHHHHHhc-----CCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 000 00123334333333 2344333333344456789999999999
Q ss_pred CcCcHHHHH---hcCCCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHH
Q 011399 255 KLNEQVAIE---SQGLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGH 329 (487)
Q Consensus 255 ~L~~~~~~~---~~~~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~ 329 (487)
+|.+..... ....+. ...+..++..||.|||++||+||||||+|||++.+|.+||+|||+++.+.......
T Consensus 271 ~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~---- 346 (543)
T 3c4z_A 271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT---- 346 (543)
T ss_dssp BHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCB----
T ss_pred CHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCccc----
Confidence 998764321 112443 34556788899999999999999999999999999999999999998765432100
Q ss_pred HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcC----cHHHHHHHHHHHHhhCCCCCChHHHH
Q 011399 330 VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSEL----NFKTIVDGLGAVLYQYPFNVPAYYAL 405 (487)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~p~~~~~ 405 (487)
....+++.++++++..-.-.+.++|+||+|+.+++++++.. |+... +...+...+. ...
T Consensus 347 --~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~--PF~~~~~~~~~~~~~~~i~----~~~--------- 409 (543)
T 3c4z_A 347 --KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG--PFRARGEKVENKELKQRVL----EQA--------- 409 (543)
T ss_dssp --CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC--SSCCTTCCCCHHHHHHHHH----HCC---------
T ss_pred --ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCC--CCCCCccchhHHHHHHHHh----hcc---------
Confidence 00122334444444444455788999999999999998543 33221 1111111110 000
Q ss_pred HHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccc-----cchhhccccc
Q 011399 406 ILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVL-----YSPFTINLVD 474 (487)
Q Consensus 406 l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~-----~~~~~~~~~~ 474 (487)
+.+ ....++.+++.+.+||.+||..|++. .+...|+||.
T Consensus 410 ----------------~~~--------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~ 453 (543)
T 3c4z_A 410 ----------------VTY--------------PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453 (543)
T ss_dssp ----------------CCC--------------CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGT
T ss_pred ----------------cCC--------------CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCcccc
Confidence 111 01346788899999999999999964 4567899985
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=269.91 Aligned_cols=195 Identities=15% Similarity=0.194 Sum_probs=127.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++ ..||||+++...... .+ .+.+.+.+..+....|+|++.+++
T Consensus 42 ~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~--~~---~~~f~~E~~il~~l~HpNIV~l~g-------------- 99 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTP--EQ---FQAFRNEVAVLRKTRHVNILLFMG-------------- 99 (307)
T ss_dssp EECCCCSSSEEEEEESS---SEEEEEECCCSSCCH--HH---HHHHHHHHHHHTTCCCTTBCCEEE--------------
T ss_pred eEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCH--HH---HHHHHHHHHHHHhCCCCCEeeEEE--------------
Confidence 67999999999999875 369999987432110 01 111222222222333555444332
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~givH 291 (487)
+. .....+||||||+||+|.++.......++... .+..+++.||.|||+.||+|
T Consensus 100 ----------------------~~--~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiH 155 (307)
T 3omv_A 100 ----------------------YM--TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155 (307)
T ss_dssp ----------------------EE--CSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred ----------------------EE--ECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 11 12456899999999999987544333455443 45678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc---CCCCCCCCcchHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL---DFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~Di~sl~~~l~~~~ 368 (487)
|||||+|||+++++.+||+|||+++..+........ ....+++.++++++... +.++.++|+||+|+.++|++
T Consensus 156 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~----~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ell 231 (307)
T 3omv_A 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV----EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231 (307)
T ss_dssp SCCCSSSEEEETTEEEEECCCSSCBC----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred CccCHHHEEECCCCcEEEeeccCceecccCCcceee----cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHH
Confidence 999999999999999999999999877543221111 12234455555555542 34577899999999999999
Q ss_pred HHhccCCCCcCc
Q 011399 369 DDALNSSVSELN 380 (487)
Q Consensus 369 ~~~~~~~~~~~~ 380 (487)
++ ..|+.+.+
T Consensus 232 tg--~~Pf~~~~ 241 (307)
T 3omv_A 232 TG--ELPYSHIN 241 (307)
T ss_dssp HS--SCTTTTCC
T ss_pred HC--CCCCCCCC
Confidence 84 34555443
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-32 Score=271.14 Aligned_cols=237 Identities=16% Similarity=0.141 Sum_probs=145.9
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||+||+|+++ .+|+.||||+++...... .+.+.+.++.+..+.|+|++++++.
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~-------~~~f~~E~~il~~l~HpnIV~l~g~-------- 111 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-------RQDFQREAELLTMLQHQHIVRFFGV-------- 111 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHH-------HHHHHHHHHHHTTCCCTTBCCEEEE--------
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHH-------HHHHHHHHHHHHhCCCCCCCcEEEE--------
Confidence 67999999999999875 368999999997543221 1112222222233345555554432
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh--------------cCCCH--HHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--------------QGLKV--LDL 272 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--------------~~~~~--~~~ 272 (487)
.......+||||||+||+|.++..... ..++. ...
T Consensus 112 -----------------------------~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 162 (329)
T 4aoj_A 112 -----------------------------CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162 (329)
T ss_dssp -----------------------------ECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHH
T ss_pred -----------------------------EEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHH
Confidence 122356789999999999988753211 12333 334
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+..+++.|+.|||+.||+||||||+|||++.++.+||+|||+++.+......... ....+.+.+++++....+..+
T Consensus 163 i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~----~~~~gt~~ymAPE~~~~~~~~ 238 (329)
T 4aoj_A 163 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG----GRTMLPIRWMPPESILYRKFT 238 (329)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--------------------CCCCGGGCCHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceec----CcccccccccChhhhcCCCCC
Confidence 5678889999999999999999999999999999999999999987554322111 112344555666666666678
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCCh
Q 011399 353 PDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (487)
.++|+||+|+.++|+++. ...|+.+.+...++..+.... ...|..+|+.+..+++.+ ...||+-++
T Consensus 239 ~~sDvwS~Gvvl~Ellt~-G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c-------l~~dP~~RP 305 (329)
T 4aoj_A 239 TESDVWSFGVVLWEIFTY-GKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGC-------WQREPQQRH 305 (329)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHH-------CCSSTTTSC
T ss_pred ccccccchHHHHHHHHcC-CCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHH-------cCcChhHCc
Confidence 899999999999999972 134666666666555443211 122334455544444333 445555443
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-33 Score=272.90 Aligned_cols=207 Identities=14% Similarity=0.150 Sum_probs=138.0
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||+||+|++. .+|+.||||+++....+. .+.+.+.++.+..+.|+|++++++.
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~-------~~~f~~E~~il~~l~HpnIV~l~g~-------- 83 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA-------RKDFHREAELLTNLQHEHIVKFYGV-------- 83 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHH-------HHHHHHHHHHHTTCCCTTBCCEEEE--------
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHH-------HHHHHHHHHHHHhCCCCCCccEEEE--------
Confidence 67999999999999875 358899999997543221 1111222222223345555554432
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh------------cCCCH--HHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES------------QGLKV--LDLVN 274 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~------------~~~~~--~~~~~ 274 (487)
.......+||||||+||+|.++..... ..++. ...+.
T Consensus 84 -----------------------------~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 134 (299)
T 4asz_A 84 -----------------------------CVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA 134 (299)
T ss_dssp -----------------------------ECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHH
T ss_pred -----------------------------EeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHH
Confidence 122356789999999999998854321 12333 34556
Q ss_pred HHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 011399 275 TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (487)
Q Consensus 275 ~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (487)
.+++.|+.|||++||+||||||+|||++.++.+||+|||+++.+......... ....+.+.+++++....+.++++
T Consensus 135 ~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~----~~~~gt~~ymAPE~~~~~~~~~k 210 (299)
T 4asz_A 135 QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVG----GHTMLPIRWMPPESIMYRKFTTE 210 (299)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEET----TTEEECGGGCCHHHHHHCCCCHH
T ss_pred HHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeec----CceecChhhcCHHHHcCCCCCch
Confidence 88889999999999999999999999999999999999999765433211000 01123344555555566667899
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Q 011399 355 VDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLG 389 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 389 (487)
+|+||+|+.++|+++. ...|+.+.+..+++..+.
T Consensus 211 ~DVwS~Gvvl~Ellt~-G~~Pf~~~~~~~~~~~i~ 244 (299)
T 4asz_A 211 SDVWSLGVVLWEIFTY-GKQPWYQLSNNEVIECIT 244 (299)
T ss_dssp HHHHHHHHHHHHHHTT-TCCTTTTSCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHH
Confidence 9999999999999972 135677777666665543
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=270.14 Aligned_cols=205 Identities=17% Similarity=0.147 Sum_probs=134.3
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||+||+|++. .+++.||||+++......... .+.+.+..+..+.|+|++.+++.
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~------~f~~E~~il~~l~HpNIV~l~g~-------- 97 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE------EFRHEAMLRARLQHPNVVCLLGV-------- 97 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHH------HHHHHHHHHHHCCCTTBCCEEEE--------
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHH------HHHHHHHHHHhCCCCCCCCcceE--------
Confidence 56999999999999974 367899999987542211100 01111111112235555444331
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---------------cCCCHH--H
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLKVL--D 271 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~~--~ 271 (487)
.......+||||||+||+|.++..... ..+++. .
T Consensus 98 -----------------------------~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 148 (308)
T 4gt4_A 98 -----------------------------VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148 (308)
T ss_dssp -----------------------------ECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHH
T ss_pred -----------------------------EEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHH
Confidence 122356789999999999998854321 123333 3
Q ss_pred HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 272 ~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
.+..+++.|+.|||++||+||||||+|||+++++.+||+|||+++.+......... ....+.+.+++++....+.+
T Consensus 149 ~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~----~~~~gt~~ymAPE~l~~~~~ 224 (308)
T 4gt4_A 149 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL----GNSLLPIRWMAPEAIMYGKF 224 (308)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSS----SSSCBCGGGCCHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEe----cccccCCcccCHHHHhCCCC
Confidence 45578889999999999999999999999999999999999999876543211100 01123344555555566777
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHH
Q 011399 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVD 386 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~ 386 (487)
+.++|+||+|+.++|+++. ...|+.+.+...++.
T Consensus 225 s~ksDVwSfGvvl~El~t~-g~~Pf~~~~~~~~~~ 258 (308)
T 4gt4_A 225 SIDSDIWSYGVVLWEVFSY-GLQPYCGYSNQDVVE 258 (308)
T ss_dssp CHHHHHHHHHHHHHHHHTT-TCCTTTTCCHHHHHH
T ss_pred CccchhhhHHHHHHHHHhC-CCCCCCCCCHHHHHH
Confidence 8999999999999999972 124666666555443
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=291.50 Aligned_cols=252 Identities=17% Similarity=0.146 Sum_probs=170.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++...... .+.+.+ .+..+..+.|+|++.+.+
T Consensus 163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~----~~~~~~---Ei~il~~l~hpnIv~l~~-------------- 221 (573)
T 3uto_A 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD----KETVRK---EIQTMSVLRHPTLVNLHD-------------- 221 (573)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----HHHHHH---HHHHHHHTCCTTBCCEEE--------------
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEeccchhh----HHHHHH---HHHHHHhCCCCCCCeEEE--------------
Confidence 67999999999999999999999999986442211 111110 001111122444333322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC--CCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG--LKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~--~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
+ .+..+..|||||||+||+|.+++...... ......+..+++.||.|||++||+|
T Consensus 222 ----------------------~-~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH 278 (573)
T 3uto_A 222 ----------------------A-FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278 (573)
T ss_dssp ----------------------E-EECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ----------------------E-EEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 1 12346678999999999998764322222 3445667789999999999999999
Q ss_pred cCCCCCCeEEcCC--CcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 292 ADPHPGNLLATPE--GKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 292 ~Dlkp~Nili~~~--g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
|||||+|||++.+ |.+||+|||+++.+.+... ...+ +.+.+++++++.-.-++..+|+||+|+.+++|+
T Consensus 279 RDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~--------GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml 350 (573)
T 3uto_A 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--------GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 350 (573)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEEC--------SSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH
T ss_pred ccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeE--------ECccccCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999854 8999999999998865421 1112 234444444444444577899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
.+. .|+.+.+....+..+. ......|+. .....++++++
T Consensus 351 ~G~--~Pf~~~~~~~~~~~i~----~~~~~~~~~-----------------------------------~~~~~s~~~~d 389 (573)
T 3uto_A 351 SGL--SPFGGENDDETLRNVK----SCDWNMDDS-----------------------------------AFSGISEDGKD 389 (573)
T ss_dssp HSC--CSSCCSSHHHHHHHHH----TTCCCCCSG-----------------------------------GGTTSCHHHHH
T ss_pred HCC--CCCCCcCHHHHHHHHH----hCCCCCCcc-----------------------------------cccCCCHHHHH
Confidence 854 4565555443332221 111111110 11245788999
Q ss_pred HHHHHHhhcCcccccccchhhccccccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVDFEFV 478 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~ 478 (487)
++.+||.+||++|++..+.+.|+||.-...
T Consensus 390 li~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 390 FIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 999999999999999999999999975443
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-31 Score=267.85 Aligned_cols=323 Identities=11% Similarity=0.069 Sum_probs=196.0
Q ss_pred hhcCCCCCCHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHhCCCHHhhh----------cccC-CcccccccccEEEEEEE
Q 011399 82 LSTRPDICPPEYLEELSELQ-DALPTFPDAEAFSCIERELGLTLDSIF----------SSIS-PSPIAAASLGQVYKAQL 149 (487)
Q Consensus 82 ls~r~d~~p~~~~~~l~~lq-d~~~~~~~~~~~~~i~~~lg~~~~~~f----------~~~~-~~~ig~Gs~gqV~~a~~ 149 (487)
-|+++|++++++.+++..++ +.+++.+...+...+..++- +.+..+ ..+. .+.||+|+||+||+|++
T Consensus 16 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~ 94 (377)
T 3byv_A 16 FQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLW-NTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATD 94 (377)
T ss_dssp -CCTTHHHHHHHHHHCGGGCCCSTTC-CHHHHHHHHHHHTC-C-CCEEEEEESSSCCCEEEEEEEEEEEETTEEEEEEEC
T ss_pred CCCCchHHHHHHHHhCcccccccccccccchhhhhhHHHhc-CCCCcEEEEeecCCCCceEEEcceeecCCCEEEEEEEE
Confidence 37888999999999999999 99999999988888777652 222222 1111 37899999999999999
Q ss_pred ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCC
Q 011399 150 KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKE 229 (487)
Q Consensus 150 ~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~ 229 (487)
+.+|+.||||+++...... ....+.+......+..+....|+|+++++..+... .++.. ..+...+...+.+..
T Consensus 95 ~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~ 168 (377)
T 3byv_A 95 QETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP----FDLVK-DPQKKKMIRVRLDER 168 (377)
T ss_dssp -CCCCEEEEEEEEECC-CC-TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCC----SEEEE-CTTSCSEEEC-----
T ss_pred CCCCcEEEEEEEeeccccc-hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhh----hhhhh-ccCCccccccccCCC
Confidence 8789999999986431111 01112222222222334444577777766422100 00000 000000000000000
Q ss_pred CeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCC-------CHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEE
Q 011399 230 DVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGL-------KVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLA 301 (487)
Q Consensus 230 ~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~-------~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili 301 (487)
.+++ ...+|||||+ +|+|.++.... .... .....+..++..||.|||++||+||||||+|||+
T Consensus 169 ~~~i--------~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll 239 (377)
T 3byv_A 169 DMWV--------LSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL 239 (377)
T ss_dssp -CEE--------ESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred ceEE--------EEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 1111 1257999999 56888875532 2222 2223366888899999999999999999999999
Q ss_pred cCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH----HHH--cCCCCCCCCcchHHHHHHHHHHHhccCC
Q 011399 302 TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARD----YYA--LDFLSPDVDVTPIVPALRNFFDDALNSS 375 (487)
Q Consensus 302 ~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~g~~~~~~Di~sl~~~l~~~~~~~~~~~ 375 (487)
+.+|.+||+|||+++..+.... ..+ . ..+..||.+... ... ....++++|+||+|+.+++++++. .|
T Consensus 240 ~~~~~~kL~DFG~a~~~~~~~~-~~~---g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~--~P 312 (377)
T 3byv_A 240 DQRGGVFLTGFEHLVRDGARVV-SSV---S-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD--LP 312 (377)
T ss_dssp CTTCCEEECCGGGCEETTCEEE-CCC---C-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS--CC
T ss_pred cCCCCEEEEechhheecCCccc-CCC---C-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC--CC
Confidence 9999999999999986543211 011 1 334556654432 000 013477889999999999998842 23
Q ss_pred CCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHh
Q 011399 376 VSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLF 455 (487)
Q Consensus 376 ~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~ 455 (487)
+...+.. ... ....+ .....++.+++.+.+||.
T Consensus 313 f~~~~~~---------------~~~-----------------~~~~~---------------~~~~~~~~~~~li~~~L~ 345 (377)
T 3byv_A 313 ITKDAAL---------------GGS-----------------EWIFR---------------SCKNIPQPVRALLEGFLR 345 (377)
T ss_dssp C---------------------CCS-----------------GGGGS---------------SCCCCCHHHHHHHHHHTC
T ss_pred Ccccccc---------------cch-----------------hhhhh---------------hccCCCHHHHHHHHHHcC
Confidence 2211100 000 00000 012457889999999999
Q ss_pred hcCcccccccchhhccccc
Q 011399 456 KDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 456 ~d~~~r~~~~~~~~~~~~~ 474 (487)
.||..|++..+.+.|+||.
T Consensus 346 ~dp~~Rpt~~e~l~hp~f~ 364 (377)
T 3byv_A 346 YPKEDRLLPLQAMETPEYE 364 (377)
T ss_dssp SSGGGCCCHHHHHTSHHHH
T ss_pred CCchhCCCHHHHhhChHHH
Confidence 9999999999999999995
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-30 Score=258.62 Aligned_cols=190 Identities=16% Similarity=0.127 Sum_probs=128.3
Q ss_pred cccccccccEEEEEEEccC-----CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYS-----GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~-----g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||+||+|++..+ ++.||||+++.+..... . +
T Consensus 70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~---~-----------------------------~----- 112 (353)
T 4ase_A 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---H-----------------------------R----- 112 (353)
T ss_dssp EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHH---H-----------------------------H-----
T ss_pred eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHH---H-----------------------------H-----
Confidence 6899999999999998643 46899999975432210 0 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---------------CCCH--H
Q 011399 209 LNYVQEGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------GLKV--L 270 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~--~ 270 (487)
+|.+|++.+.++. ++++ |.+-.++.+-.+..+||||||+||+|.+++..... .++. .
T Consensus 113 -~~~~E~~il~~l~----hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~ 187 (353)
T 4ase_A 113 -ALMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187 (353)
T ss_dssp -HHHHHHHHHHHHC----CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHH
T ss_pred -HHHHHHHHHHHcC----CCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHH
Confidence 1333443333332 2222 22222222333557899999999999998653221 1233 3
Q ss_pred HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 011399 271 DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF 350 (487)
Q Consensus 271 ~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (487)
..+..+++.|+.|||++||+||||||+|||++.++.+||+|||+++.+..+...... ....+.+.+++++.+.-+.
T Consensus 188 ~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~----~~~~gt~~ymAPE~l~~~~ 263 (353)
T 4ase_A 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK----GDARLPLKWMAPETIFDRV 263 (353)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEE----TTEEECGGGCCHHHHHHCC
T ss_pred HHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceee----ccccccccccCHHHHhcCC
Confidence 345678999999999999999999999999999999999999999987543210000 0112234445555555566
Q ss_pred CCCCCCcchHHHHHHHHHH
Q 011399 351 LSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 351 ~~~~~Di~sl~~~l~~~~~ 369 (487)
.+.++|+||+|+.++|+++
T Consensus 264 y~~ksDVwS~Gv~l~El~t 282 (353)
T 4ase_A 264 YTIQSDVWSFGVLLWEIFS 282 (353)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred CCCcccEeehHHHHHHHHh
Confidence 7889999999999999986
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-30 Score=257.17 Aligned_cols=190 Identities=16% Similarity=0.098 Sum_probs=122.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++ +|+.||||+++....+....+ ..+..+....|+|++.+++.+.
T Consensus 9 ~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e--------~Ei~~~~~l~HpNIv~l~g~~~----------- 67 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFRE--------AEIYQTVMLRHENILGFIAADN----------- 67 (303)
T ss_dssp EEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHH--------HHHHTSTTCCCTTBCCEEEEEE-----------
T ss_pred EEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHH--------HHHHHHhcCCCCCCCcEEEEEE-----------
Confidence 6799999999999997 699999999975432221111 0111222334666555443210
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC--CCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHC--
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEY-- 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~-- 287 (487)
.+. ....+||||||+||+|.++.. ..+.+.. ..+..+++.|+.|+|++
T Consensus 68 ------------------------~~~~~~~~~~lV~Ey~~~gsL~~~l~--~~~l~~~~~~~i~~~ia~gl~ylH~~~~ 121 (303)
T 3hmm_A 68 ------------------------KDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIV 121 (303)
T ss_dssp ------------------------EECSSSEEEEEEEECCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred ------------------------ecCCCceEEEEEecCCCCCcHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 011 124589999999999999854 3444443 34557788899999987
Q ss_pred ------CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH---HHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCc
Q 011399 288 ------GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF---AIIGHVVHMVNRDYEAMARDYY-ALDFLSPDVDV 357 (487)
Q Consensus 288 ------givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~Di 357 (487)
||+||||||+|||++.+|.+||+|||+++........ .......+..+..||.+..... ..+..++++|+
T Consensus 122 ~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DV 201 (303)
T 3hmm_A 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 201 (303)
T ss_dssp STTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHH
T ss_pred hccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhh
Confidence 9999999999999999999999999999865432110 0111122334445554321000 00012457899
Q ss_pred chHHHHHHHHHHH
Q 011399 358 TPIVPALRNFFDD 370 (487)
Q Consensus 358 ~sl~~~l~~~~~~ 370 (487)
||+|+.++|++++
T Consensus 202 wS~Gvvl~El~tg 214 (303)
T 3hmm_A 202 YAMGLVFWEIARR 214 (303)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHC
Confidence 9999999999985
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=257.45 Aligned_cols=287 Identities=18% Similarity=0.145 Sum_probs=184.6
Q ss_pred HHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhh-hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHH
Q 011399 96 ELSELQDALPTFPDAEAFSCIERELGLTLDSI-FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFY 174 (487)
Q Consensus 96 ~l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~-f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~ 174 (487)
....|.-..++++.+++++.++..++.+.... |+.. ++||+|+||+||+|+++.+|+.||||++++.......
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~---- 87 (321)
T 2c30_A 14 GTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSY--VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE---- 87 (321)
T ss_dssp -----------CCHHHHHHHHHTTSCSSCHHHHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHH----
T ss_pred hccceeecCCcCcHHHHHHHHhhccCCCCchhhhhcc--EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHH----
Confidence 34556666788999999999988887665444 3333 5899999999999999889999999998754221100
Q ss_pred HHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCC
Q 011399 175 LIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGV 254 (487)
Q Consensus 175 ~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~ 254 (487)
. +.+|+..+.++ .++++.-..-++...+..++||||++|+
T Consensus 88 -----------------------------~------~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~ 127 (321)
T 2c30_A 88 -----------------------------L------LFNEVVIMRDY-----QHFNVVEMYKSYLVGEELWVLMEFLQGG 127 (321)
T ss_dssp -----------------------------H------HHHHHHHHTTC-----CCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred -----------------------------H------HHHHHHHHHhC-----CCCCcceEEEEEEECCEEEEEEecCCCC
Confidence 0 12223222222 1233322222334456789999999999
Q ss_pred CcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHH
Q 011399 255 KLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVH 332 (487)
Q Consensus 255 ~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~ 332 (487)
+|.++.. ....+. ...+..++..++.|+|+.|++|||+||+||+++.+|.++|+|||++..+....... .
T Consensus 128 ~L~~~l~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~-~----- 199 (321)
T 2c30_A 128 ALTDIVS--QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR-K----- 199 (321)
T ss_dssp BHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB-C-----
T ss_pred CHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccc-c-----
Confidence 9988743 334443 34455778889999999999999999999999999999999999988765421100 0
Q ss_pred HHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHH
Q 011399 333 MVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTV 412 (487)
Q Consensus 333 ~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~ 412 (487)
...+++..++++....+..++++|+||+|+.+++++++. .++...+.......+
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~--~pf~~~~~~~~~~~~------------------------ 253 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE--PPYFSDSPVQAMKRL------------------------ 253 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CTTTTSCHHHHHHHH------------------------
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHH------------------------
Confidence 011223333444444555678899999999999999843 343333322211111
Q ss_pred HHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccccc
Q 011399 413 LEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFV 478 (487)
Q Consensus 413 leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~ 478 (487)
.....|.+.. ....++.+++.+.+||..||..|++..+.+.|+||.-...
T Consensus 254 ----~~~~~~~~~~------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~ 303 (321)
T 2c30_A 254 ----RDSPPPKLKN------------SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGL 303 (321)
T ss_dssp ----HHSSCCCCTT------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCC
T ss_pred ----hcCCCCCcCc------------cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCCC
Confidence 0111122111 1134678899999999999999999999999999965443
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-28 Score=244.12 Aligned_cols=250 Identities=17% Similarity=0.104 Sum_probs=162.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++......- .. ... +..
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~----------------------~~--------~~~------~~~ 72 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD----------------------DD--------VEC------TMT 72 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHH----------------------TT--------HHH------HHH
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcch----------------------hH--------HHH------HHH
Confidence 789999999999999998999999999874311100 00 001 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|.+.+.. ..+++.+.-..-+.......++||||++|++|.+..... .........+..++..+|.|||++||+||
T Consensus 73 E~~il~~----~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr 148 (353)
T 3txo_A 73 EKRILSL----ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYR 148 (353)
T ss_dssp HHHHHHH----TTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHHh----ccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 2222211 223443322222333456679999999999998775432 22333445667888899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.++|+|||+++........ ......+..+..||.+... ..++++|+||+|+.+++++++.
T Consensus 149 Dlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~ell~G~- 221 (353)
T 3txo_A 149 DLKLDNVLLDHEGHCKLADFGMCKEGICNGVT-TATFCGTPDYIAPEILQEM-----LYGPAVDWWAMGVLLYEMLCGH- 221 (353)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCSCC----------CCGGGCCHHHHHHH-----HCTTHHHHHHHHHHHHHHHHSS-
T ss_pred CCCHHHEEECCCCCEEEccccceeecccCCcc-ccccCCCcCeEChhhcCCC-----CcCCccCCCcchHHHHHHHhCC-
Confidence 99999999999999999999999864332111 1111223345556655432 2377899999999999999843
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+...+...+.. ..... | ...++.+++.+.+
T Consensus 222 -~Pf~~~~~~~~~~~i~~----~~~~~----------------------p-----------------~~~~~~~~~li~~ 257 (353)
T 3txo_A 222 -APFEAENEDDLFEAILN----DEVVY----------------------P-----------------TWLHEDATGILKS 257 (353)
T ss_dssp -CSSCCSSHHHHHHHHHH----CCCCC----------------------C-----------------TTSCHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHc----CCCCC----------------------C-----------------CCCCHHHHHHHHH
Confidence 45555554433332211 01111 1 1246778889999
Q ss_pred HHhhcCcccccc------cchhhccccc
Q 011399 453 LLFKDGRFRHVL------YSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~~------~~~~~~~~~~ 474 (487)
||.+||..|++. .+.+.|+||.
T Consensus 258 lL~~dP~~R~~~~~~~~~~~il~hp~f~ 285 (353)
T 3txo_A 258 FMTKNPTMRLGSLTQGGEHAILRHPFFK 285 (353)
T ss_dssp HTCSSGGGSTTSGGGTCTHHHHTSGGGT
T ss_pred HhhhCHHHccCCcccCCHHHHhhCCccc
Confidence 999999999987 5678899984
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-29 Score=252.10 Aligned_cols=247 Identities=15% Similarity=0.151 Sum_probs=164.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||++....... .+ .+. +.+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~-----------------------------~~~------~~~ 63 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP--TS-----------------------------LQK------LFR 63 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HH-----------------------------HHH------HHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH--HH-----------------------------HHH------HHH
Confidence 78999999999999998899999999986431110 00 011 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|.+.+..+ .++++ ++++ ....+..++||||++|++|.++.... .........+..++..++.|+|+.|++
T Consensus 64 E~~~l~~l-----~hpnI--v~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~iv 136 (328)
T 3fe3_A 64 EVRIMKIL-----NHPNI--VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136 (328)
T ss_dssp HHHHHHHC-----CCTTB--CCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhC-----CCCCE--eeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 22222222 12222 2222 23345679999999999998875432 122333445667888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|||+||+|||++.+|.++|+|||++......... .....+..+..||.+. ...+.++++|+||+|+.+++++++
T Consensus 137 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~----~~~~~~~~~DiwslG~il~ell~g 210 (328)
T 3fe3_A 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DAFCGAPPYAAPELFQ----GKKYDGPEVDVWSLGVILYTLVSG 210 (328)
T ss_dssp CSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG--GTTSSSGGGCCHHHHH----TCCCCSHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc--ccccCCcceeCccccc----CCCcCCchhhhhhhHHHHHHHHhC
Confidence 9999999999999999999999999765433111 1111223344555432 233345679999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+...+...+.. .....| ...++++++.+
T Consensus 211 ~--~pf~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~s~~~~~li 245 (328)
T 3fe3_A 211 S--LPFDGQNLKELRERVLR----GKYRIP---------------------------------------FYMSTDCENLL 245 (328)
T ss_dssp S--CSSCCSSHHHHHHHHHH----CCCCCC---------------------------------------TTSCHHHHHHH
T ss_pred C--CCCCCCCHHHHHHHHHh----CCCCCC---------------------------------------CCCCHHHHHHH
Confidence 3 45555554433322211 011111 12467788899
Q ss_pred HHHHhhcCcccccccchhhcccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.+||..||..|++..+.+.|+||..
T Consensus 246 ~~~L~~dP~~R~t~~eil~h~~~~~ 270 (328)
T 3fe3_A 246 KRFLVLNPIKRGTLEQIMKDRWINA 270 (328)
T ss_dssp HHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred HHHCCCChhHCcCHHHHhcCHhhcC
Confidence 9999999999999999999999964
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-29 Score=246.96 Aligned_cols=256 Identities=16% Similarity=0.126 Sum_probs=166.6
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
...|... +.||+|+||.||+|.+..+|+.||||+......... +.
T Consensus 19 ~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~---------------------------------~~ 63 (297)
T 3fxz_A 19 KKKYTRF--EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---------------------------------EL 63 (297)
T ss_dssp GGTBCCC--EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCH---------------------------------HH
T ss_pred hhceeee--eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHH---------------------------------HH
Confidence 3445554 789999999999999988999999999863311100 00
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLR 282 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~ 282 (487)
+.+|+..+.++ .+++ +++++. ......++||||++|++|.++.............+..++..++.
T Consensus 64 ------~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~ 130 (297)
T 3fxz_A 64 ------IINEILVMREN-----KNPN--IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE 130 (297)
T ss_dssp ------HHHHHHHHHHC-----CCTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHhcC-----CCCC--CCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHH
Confidence 11122222211 1222 222222 23456789999999999998754332223334455678888999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
|||+.|++|||+||+|||++.+|.++|+|||++..+....... . ...+++..++++....+..++++|+||+|+
T Consensus 131 ~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 204 (297)
T 3fxz_A 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-S-----TMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204 (297)
T ss_dssp HHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB-C-----CCCSCGGGCCHHHHHCSCBCTHHHHHHHHH
T ss_pred HHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc-C-----CccCCcCccChhhhcCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999988765432100 0 011222333333444555688899999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+++++++. .|+...+.......+. ....|.+.. ....
T Consensus 205 il~ell~g~--~pf~~~~~~~~~~~~~----------------------------~~~~~~~~~------------~~~~ 242 (297)
T 3fxz_A 205 MAIEMIEGE--PPYLNENPLRALYLIA----------------------------TNGTPELQN------------PEKL 242 (297)
T ss_dssp HHHHHHHSS--CTTTTSCHHHHHHHHH----------------------------HHCSCCCSC------------GGGS
T ss_pred HHHHHHhCC--CCCCCCCHHHHHHHHH----------------------------hCCCCCCCC------------cccc
Confidence 999999843 3443333222111110 001111111 0134
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
++.+++.+.+||..||..|++..+.+.|+||...
T Consensus 243 ~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 243 SAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence 6778899999999999999999999999999754
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=257.23 Aligned_cols=288 Identities=16% Similarity=0.169 Sum_probs=163.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||++......... .....+++ ..+....|+|++.+++.+
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~-~~~~~~E~----~~l~~l~hpnIv~l~~~~------------ 130 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYREL----VLMKCVNHKNIISLLNVF------------ 130 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHH-HHHHHHHH----HHHHHCCCTTBCCCSEEE------------
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHH-HHHHHHHH----HHHHhCCCCCCCcEEEEE------------
Confidence 7899999999999999989999999998743211100 00011111 111111233333332211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.+.-..+.....+|||||++|+.+..+ . ..........+..++..||.|||+.||+|||
T Consensus 131 -------------------~~~~~~~~~~~~~lv~E~~~~~l~~~~-~-~~l~~~~~~~~~~qil~aL~~lH~~~iiHrD 189 (464)
T 3ttj_A 131 -------------------TPQKTLEEFQDVYLVMELMDANLCQVI-Q-MELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189 (464)
T ss_dssp -------------------CSCCSTTTCCEEEEEEECCSEEHHHHH-T-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred -------------------ccCCccccCCeEEEEEeCCCCCHHHHH-h-hcCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 000000112345899999988533222 1 1122223445678889999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
|||+|||++.+|.+||+|||+++....... ......+..+..||.+ .-.-.++++|+||+|+.+++++++.
T Consensus 190 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlG~il~ell~g~-- 260 (464)
T 3ttj_A 190 LKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVI-----LGMGYKENVDIWSVGCIMGEMVRHK-- 260 (464)
T ss_dssp CCGGGEEECTTSCEEECCCCCC-----CCC--C----CCCTTCCHHHH-----TTCCCCTTHHHHHHHHHHHHHHHSS--
T ss_pred CChHhEEEeCCCCEEEEEEEeeeecCCCcc--cCCCcccccccCHHHH-----cCCCCCHHHHHHHHHHHHHHHHhCC--
Confidence 999999999999999999999987654311 1112223345555554 2334578899999999999999753
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc-------CCCHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT-------DPNPYL 446 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~-------~~~p~~ 446 (487)
.++.+.+....+..+...+ ....|..+..+...... . ..-.|.+.-... .......+.. ..++++
T Consensus 261 ~pF~g~~~~~~~~~i~~~l---g~p~~~~~~~~~~~~~~---~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~ 332 (464)
T 3ttj_A 261 ILFPGRDYIDQWNKVIEQL---GTPCPEFMKKLQPTVRN---Y-VENRPKYAGLTF-PKLFPDSLFPADSEHNKLKASQA 332 (464)
T ss_dssp CSSCCSSHHHHHHHHHHHH---CSCCHHHHTTSCHHHHH---H-HTTSCCCCCCCH-HHHSCGGGSCCSSHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhc---CCCCHHHHHHcchhhhh---H-hhcccccCCCCh-HHhCcccccccccccccccCHHH
Confidence 4566555544443333322 22222222111111100 0 001121111000 0000000000 015788
Q ss_pred HHHHHHHHhhcCcccccccchhhccccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
++.+.+||..||.+|++..+.+.|+||..-
T Consensus 333 ~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~ 362 (464)
T 3ttj_A 333 RDLLSKMLVIDPAKRISVDDALQHPYINVW 362 (464)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred HHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence 999999999999999999999999999743
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-29 Score=250.85 Aligned_cols=293 Identities=14% Similarity=0.083 Sum_probs=162.9
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH----
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS---- 203 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~---- 203 (487)
|+.. +.||+|+||+||+|+++.+|+.||||+++....... .+. +.+.+..+....|+|++++++.+.+
T Consensus 8 y~~~--~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~---~~~---~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 79 (332)
T 3qd2_B 8 FEPI--QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA---REK---VMREVKALAKLEHPGIVRYFNAWLETPPE 79 (332)
T ss_dssp EEEE--EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTH---HHH---HHHHHHHHTSCCCTTBCCEEEEEEECCSC
T ss_pred Ccee--eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhH---HHH---HHHHHHHHHhCCCCCEeeEEEEEEEeccc
Confidence 4444 789999999999999998999999999874322111 111 1112222223458888876543210
Q ss_pred ---HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee-------------cCCCCceEEEeecCCCCcCcHHHHHhc--
Q 011399 204 ---RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW-------------DYTSGKVLTMEWVEGVKLNEQVAIESQ-- 265 (487)
Q Consensus 204 ---~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~-------------~~~~~~~LvmE~~~G~~L~~~~~~~~~-- 265 (487)
....++....|..+...........+.+.++.+.. ......++|||||+|++|.++......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~ 159 (332)
T 3qd2_B 80 KWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLE 159 (332)
T ss_dssp HHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGG
T ss_pred hhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCcc
Confidence 00111111112111111111111111111111110 011236899999999999887543211
Q ss_pred CCC--HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHH--HHHH----HHHhcC
Q 011399 266 GLK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII--GHVV----HMVNRD 337 (487)
Q Consensus 266 ~~~--~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~--~~~~----~~~~~~ 337 (487)
... ....+..++..+|.|||+.|++||||||+||+++.+|.++|+|||+++.+......... .... ....++
T Consensus 160 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 160 DREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 112 23456678889999999999999999999999999999999999999887654221110 0000 001123
Q ss_pred HHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhh
Q 011399 338 YEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLA 417 (487)
Q Consensus 338 ~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~ 417 (487)
+..++++....+..++++|+||+|+.+++++++.. ........+.. .
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~-------~~~~~~~~~~~-------------------~------- 286 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS-------TQMERVRIITD-------------------V------- 286 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCC-------CHHHHHHHHHH-------------------H-------
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCC-------ChhHHHHHHHH-------------------h-------
Confidence 33344444445556788999999999999886321 11110000000 0
Q ss_pred hhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 418 LYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 418 ~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
....+.. . ....++..++.+.+||..||..|++..+.+.|+||.
T Consensus 287 --~~~~~~~-------~----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~ 330 (332)
T 3qd2_B 287 --RNLKFPL-------L----FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330 (332)
T ss_dssp --HTTCCCH-------H----HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCC
T ss_pred --hccCCCc-------c----cccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhh
Confidence 0001100 0 011256778899999999999999999999999995
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-29 Score=254.47 Aligned_cols=262 Identities=16% Similarity=0.175 Sum_probs=171.3
Q ss_pred CCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 122 ~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
..+.+.|... +.||+|+||.||+|+++.+|+.||||+++......... ...
T Consensus 8 ~~~~~~y~~~--~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~-------------------~~~-------- 58 (361)
T 2yab_A 8 QKVEDFYDIG--EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR-------------------GVC-------- 58 (361)
T ss_dssp SCGGGTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSS-------------------SBC--------
T ss_pred CChhhceEEe--eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccc-------------------hhH--------
Confidence 3455556655 78999999999999999899999999997542210000 000
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGI 277 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i 277 (487)
.+. +.+|...+.++ .+++ +++++ .+..+..++||||++|++|.++... ....+ ....+..++
T Consensus 59 ~~~------~~~E~~il~~l-----~hpn--Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi 124 (361)
T 2yab_A 59 REE------IEREVSILRQV-----LHPN--IITLHDVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQI 124 (361)
T ss_dssp HHH------HHHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHH
T ss_pred HHH------HHHHHHHHHhC-----CCcC--CCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHH
Confidence 001 11122211111 1222 22222 2334567999999999999887432 12233 344566788
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcCCC----cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATPEG----KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSP 353 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~~g----~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (487)
..++.|||+.|++|||+||+|||++.++ .++|+|||++..+...... . ...+.+..+++++...+..+.
T Consensus 125 ~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~--~-----~~~gt~~y~aPE~~~~~~~~~ 197 (361)
T 2yab_A 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--K-----NIFGTPEFVAPEIVNYEPLGL 197 (361)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCC--C-----CCCSCGGGCCHHHHTTCCCCT
T ss_pred HHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCcc--c-----cCCCCccEECchHHcCCCCCc
Confidence 8999999999999999999999998777 7999999999877543110 0 011334444555555555678
Q ss_pred CCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHH
Q 011399 354 DVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPY 433 (487)
Q Consensus 354 ~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~ 433 (487)
++|+||+|+.+++++++. .|+...+.......+. ......|+.
T Consensus 198 ~~DiwslGvil~~ll~g~--~Pf~~~~~~~~~~~i~----~~~~~~~~~------------------------------- 240 (361)
T 2yab_A 198 EADMWSIGVITYILLSGA--SPFLGDTKQETLANIT----AVSYDFDEE------------------------------- 240 (361)
T ss_dssp HHHHHHHHHHHHHHHHSC--CSSCCSSHHHHHHHHH----TTCCCCCHH-------------------------------
T ss_pred cccHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHH----hcCCCCCch-------------------------------
Confidence 899999999999999853 4554444333332221 111111111
Q ss_pred HHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 434 FAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 434 ~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.....++.+++.+.+||.+||..|++..+.+.|+||.
T Consensus 241 ----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 277 (361)
T 2yab_A 241 ----FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (361)
T ss_dssp ----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred ----hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence 1234678899999999999999999999999999995
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=249.55 Aligned_cols=283 Identities=20% Similarity=0.240 Sum_probs=165.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|+||+||+|++..+|+.||||++........ .. +.+.+.+..+....|+|++.+++.+
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~--~~---~~~~~E~~~l~~l~hpnIv~l~~~~------------ 93 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL--FA---KRAYRELRLLKHMRHENVIGLLDVF------------ 93 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHH--HH---HHHHHHHHHHHHCCBTTBCCCSEEE------------
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHH--HH---HHHHHHHHHHHhCCCcCCCCceeeE------------
Confidence 789999999999999988999999999864321110 00 0000011111111233333222210
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
.+.-.....+..++||||+ |++|.++......+......+..++..||.|||+.|++|||
T Consensus 94 -------------------~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~D 153 (367)
T 1cm8_A 94 -------------------TPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRD 153 (367)
T ss_dssp -------------------CSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred -------------------ecCCccccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 0000000113458999999 77888875433333334455668888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
+||+||+++.+|.+||+|||+++....... +...+..+..||.+. .....+..+|+||+|+.+++++++.
T Consensus 154 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~----~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~ell~g~-- 223 (367)
T 1cm8_A 154 LKPGNLAVNEDCELKILDFGLARQADSEMT----GYVVTRWYRAPEVIL----NWMRYTQTVDIWSVGCIMAEMITGK-- 223 (367)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEECCSSCC----SSCSCGGGCCTHHHH----TTTCCCTTHHHHHHHHHHHHHHHSS--
T ss_pred cCHHHEEEcCCCCEEEEeeecccccccccC----cCcCCCCcCCHHHHh----CCCCCChhhhHHHHHHHHHHHHhCC--
Confidence 999999999999999999999987654311 112233455555442 2244688899999999999999853
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVEL 453 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~ 453 (487)
.++...+....+..+..... ..|+.+..-+.+-. .......+ |.... .++ ..+....++.+++.+.+|
T Consensus 224 ~pf~~~~~~~~l~~i~~~~g----~~~~~~~~~~~~~~-~~~~~~~~-~~~~~----~~~--~~~~~~~~~~~~~ll~~m 291 (367)
T 1cm8_A 224 TLFKGSDHLDQLKEIMKVTG----TPPAEFVQRLQSDE-AKNYMKGL-PELEK----KDF--ASILTNASPLAVNLLEKM 291 (367)
T ss_dssp CSSCCSSHHHHHHHHHHHHC----CCCHHHHHTCSCHH-HHHHHHHS-CCCCC----CCG--GGTCTTCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhcC----CCCHHHHHHhhhHH-HHHHHHhC-CCCCC----CCH--HHHCCCCCHHHHHHHHHH
Confidence 45555554444444433321 12222211000000 00000000 11000 000 122345689999999999
Q ss_pred HhhcCcccccccchhhcccccc
Q 011399 454 LFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 454 L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
|..||.+|++..+.+.|+||.-
T Consensus 292 L~~dP~~R~t~~e~l~hp~f~~ 313 (367)
T 1cm8_A 292 LVLDAEQRVTAGEALAHPYFES 313 (367)
T ss_dssp SCSSTTTSCCHHHHHHSGGGTT
T ss_pred ccCChhHCCCHHHHhcChHHHh
Confidence 9999999999999999999954
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=9.6e-28 Score=243.00 Aligned_cols=284 Identities=19% Similarity=0.205 Sum_probs=158.6
Q ss_pred hhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 127 ~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
.|... +.||+|+||.||+|.+..+|+.||||++......... ....++++ ..+....|+|++.+++.
T Consensus 30 ~y~~~--~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~E~----~~l~~l~hpnIv~~~~~------ 96 (367)
T 2fst_X 30 RYQNL--SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYREL----RLLKHMKHENVIGLLDV------ 96 (367)
T ss_dssp TEEEE--EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHH-HHHHHHHH----HHHHHCCCTTBCCCSEE------
T ss_pred ceEEe--eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHH-HHHHHHHH----HHHHhCCCCCCCcEEEE------
Confidence 34444 7899999999999999889999999998653211100 00000100 01111123333322221
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
..+.-..+.....++||||+ |++|.++.............+..++..+|.|||+
T Consensus 97 -------------------------~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 150 (367)
T 2fst_X 97 -------------------------FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150 (367)
T ss_dssp -------------------------ECSCSSGGGCCCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------EecCCccccCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00000001124568999999 6789887543323333445566888899999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++||||||+|||++.+|.++|+|||+++...... .....+..+..||.+. .....+.++|+||+|+.+++
T Consensus 151 ~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~e 222 (367)
T 2fst_X 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAE 222 (367)
T ss_dssp TTCCCCCCCGGGEEECTTCCEEECC-------------------CCCTTCCHHHHT----TCCSCCTTHHHHHHHHHHHH
T ss_pred CCeeeCCCCHhhEEECCCCCEEEeeccccccccccC----CCcCcCcCccChHHHc----CCcCCCchhhHHHHHHHHHH
Confidence 999999999999999999999999999998765432 1222234455565432 12456788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHH-----HHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYAL-----ILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~-----l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
++++. .++.+.+....+..+...+.. .++.+.. ..+.. +..+ ...|..+. ..+...
T Consensus 223 ll~g~--~pf~~~~~~~~l~~i~~~~g~----p~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~---------~~~~~~ 283 (367)
T 2fst_X 223 LLTGR--TLFPGTDHIDQLKLILRLVGT----PGAELLKKISSESARNY--IQSL--TQMPKMNF---------ANVFIG 283 (367)
T ss_dssp HHHSS--CSCCCSSHHHHHHHHHHHHCS----CCHHHHTTCCCHHHHHH--HHTS--CCCCCCCH---------HHHTTT
T ss_pred HHhCC--CCCCCCCHHHHHHHHHHHhCC----CCHHHHHHhhhHHHHHH--Hhcc--CCCCCCCH---------HHHCCC
Confidence 99853 455555544444444333211 1111100 00000 0000 00111111 122345
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.++.+++.+.+||..||.+|++..+.+.|+||.--
T Consensus 284 ~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~ 318 (367)
T 2fst_X 284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318 (367)
T ss_dssp CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred CCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence 68999999999999999999999999999999643
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.9e-28 Score=240.80 Aligned_cols=248 Identities=17% Similarity=0.140 Sum_probs=163.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++...... .... .. +..
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~~~--------~~------~~~ 66 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM----------------------DDDV--------EC------TMV 66 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH----------------------TTCH--------HH------HHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh----------------------hhhH--------HH------HHH
Confidence 78999999999999999899999999987421100 0000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.. ...++.+.-..-+.......++||||++|++|.++.... .........+..++..||.|||++|++||
T Consensus 67 E~~il~~----~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 142 (345)
T 1xjd_A 67 EKRVLSL----AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142 (345)
T ss_dssp HHHHHHH----HTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHHh----cCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 2211111 112333221112223345679999999999998875432 22334455667888899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||+|||++.+|.++|+|||+++..... ..... .+++..+++++...+-.+.++|+||+|+.+++++++
T Consensus 143 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~--------~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g 214 (345)
T 1xjd_A 143 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTF--------CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214 (345)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCC--------CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred CCChhhEEECCCCCEEEeEChhhhhcccCCCcccCC--------CCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcC
Confidence 99999999999999999999999865321 11111 123334444444444457889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+...+...+.. ..|.+. ...++++++.+
T Consensus 215 ~--~Pf~~~~~~~~~~~i~~-----------------------------~~~~~p--------------~~~s~~~~~li 249 (345)
T 1xjd_A 215 Q--SPFHGQDEEELFHSIRM-----------------------------DNPFYP--------------RWLEKEAKDLL 249 (345)
T ss_dssp S--CSSCCSSHHHHHHHHHH-----------------------------CCCCCC--------------TTSCHHHHHHH
T ss_pred C--CCCCCCCHHHHHHHHHh-----------------------------CCCCCC--------------cccCHHHHHHH
Confidence 3 45554444333322210 011111 12467888999
Q ss_pred HHHHhhcCccccccc-chhhccccc
Q 011399 451 VELLFKDGRFRHVLY-SPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~-~~~~~~~~~ 474 (487)
.+||.+||.+|++.. +...|+||.
T Consensus 250 ~~lL~~dp~~R~~~~~~i~~hp~f~ 274 (345)
T 1xjd_A 250 VKLFVREPEKRLGVRGDIRQHPLFR 274 (345)
T ss_dssp HHHSCSSGGGSBTTBSCGGGSGGGT
T ss_pred HHHhcCCHhHcCCChHHHHcCcccc
Confidence 999999999999987 788899994
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=243.36 Aligned_cols=295 Identities=15% Similarity=0.162 Sum_probs=163.5
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.. +.||+|+||.||+|.++.+|+.||||++........ +. ..
T Consensus 11 y~~~--~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~-----------------------------~~--- 54 (388)
T 3oz6_A 11 YELV--KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST--DA-----------------------------QR--- 54 (388)
T ss_dssp EEEE--EC-------CEEEEEETTTCCEEEEEEECC--CCHH--HH-----------------------------HH---
T ss_pred eEEE--EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChH--HH-----------------------------HH---
Confidence 4444 789999999999999998999999999864321110 00 01
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCe-Eeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDV-LVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh 285 (487)
+.+|...+.+ +.+++++ .+-.++.. -....++||||++| +|.++.............+..++..||.|||
T Consensus 55 ---~~~E~~~l~~----l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH 126 (388)
T 3oz6_A 55 ---TFREIMILTE----LSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVVYQLIKVIKYLH 126 (388)
T ss_dssp ---HHHHHHHHHH----TTTCTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHh----ccCCCCCCeeeeEEecCCCCEEEEEecccCc-CHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1112222221 1222221 11122221 12356999999986 6766643322223334556678899999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCH--------------------HHHHHHHHHHHHHHhcCHHHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE--------------------EARFAIIGHVVHMVNRDYEAMARDY 345 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (487)
+.||+||||||+|||++.+|.+||+|||+++.+.. ...........+..+..||.+.
T Consensus 127 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--- 203 (388)
T 3oz6_A 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL--- 203 (388)
T ss_dssp HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHT---
T ss_pred hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhc---
Confidence 99999999999999999999999999999976532 0111112222334455555432
Q ss_pred HHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCC------CCChHHHHHHHHHHHHHHhhhh
Q 011399 346 YALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPF------NVPAYYALILRSLTVLEGLALY 419 (487)
Q Consensus 346 ~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~p~~~~~l~r~l~~leg~~~~ 419 (487)
.....+.++|+||+|+.+++++++. .++...+....+..+...+. .+. ..++......+++... ....
T Consensus 204 -~~~~~~~~~DiwSlG~il~ell~g~--~pf~~~~~~~~~~~i~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 277 (388)
T 3oz6_A 204 -GSTKYTKGIDMWSLGCILGEILCGK--PIFPGSSTMNQLERIIGVID-FPSNEDVESIQSPFAKTMIESLKEK--VEIR 277 (388)
T ss_dssp -TCCCCCTHHHHHHHHHHHHHHHHSS--CSCCCSSHHHHHHHHHHHHC-CCCHHHHHTSCCSSHHHHHHHHHHH--CC--
T ss_pred -CCCCCCChhhHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHHhcC-CCCHHHHHhccCHHHHHHHHhCccc--cccc
Confidence 1234578899999999999999853 45555554444444433221 010 0011111122222110 0000
Q ss_pred hCCCCChHHhHhHHHHHH-hccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 420 ADPNFKVLAASYPYFAKR-LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 420 ldP~~~~~~~~~p~~~~~-l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
..+............... .....++++++.+.+||..||.+|++..+.+.|+||..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~ 334 (388)
T 3oz6_A 278 QSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI 334 (388)
T ss_dssp ---CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred CCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence 001111111111111111 11256899999999999999999999999999999853
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-29 Score=260.41 Aligned_cols=254 Identities=13% Similarity=0.093 Sum_probs=159.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++...... .... -.+..
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~----------------------~~~~--------------~~~~~ 118 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK----------------------RSDS--------------AFFWE 118 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----------------------TCCC--------------STHHH
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh----------------------hHHH--------------HHHHH
Confidence 78999999999999999899999999986321000 0000 00122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|...+..+ +++.+.-..-+.......++||||++|++|.++.............+..++..||.|||+.||+|||
T Consensus 119 E~~il~~l-----~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrD 193 (410)
T 3v8s_A 119 ERDIMAFA-----NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 193 (410)
T ss_dssp HHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHHHhC-----CCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 22222211 2333221111223345678999999999998875433333344556678888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC----CCCCCCCcchHHHHHHHHHH
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD----FLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~Di~sl~~~l~~~~~ 369 (487)
|||+|||++.+|.+||+|||+++.+........ ....+.+..+++++.... +.+.++|+||+|+.++++++
T Consensus 194 LKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~-----~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~ 268 (410)
T 3v8s_A 194 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC-----DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 268 (410)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEECCTTSEEEC-----CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHH
T ss_pred CCHHHeeECCCCCEEEeccceeEeeccCCcccc-----cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHh
Confidence 999999999999999999999987654311000 001123333444443322 24678999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .|+...+.......+....... ..|.. ...++++++.
T Consensus 269 G~--~Pf~~~~~~~~~~~i~~~~~~~------------------------~~p~~---------------~~~s~~~~~l 307 (410)
T 3v8s_A 269 GD--TPFYADSLVGTYSKIMNHKNSL------------------------TFPDD---------------NDISKEAKNL 307 (410)
T ss_dssp SS--CTTCCSSHHHHHHHHHTHHHHC------------------------CCCTT---------------CCCCHHHHHH
T ss_pred CC--CCCCCCChhhHHHHHHhccccc------------------------cCCCc---------------ccccHHHHHH
Confidence 43 4555444433333222110000 01110 1346777788
Q ss_pred HHHHHhhcCcc--cccccchhhccccc
Q 011399 450 LVELLFKDGRF--RHVLYSPFTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~--r~~~~~~~~~~~~~ 474 (487)
+.+||..++.. |.+..+...|+||.
T Consensus 308 i~~lL~~~~~rlgR~~~~ei~~Hp~f~ 334 (410)
T 3v8s_A 308 ICAFLTDREVRLGRNGVEEIKRHLFFK 334 (410)
T ss_dssp HHHHSSCGGGCTTSSCHHHHHTSGGGC
T ss_pred HHHHccChhhhCCCCCHHHHhcCcccc
Confidence 88888877766 77777778888884
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-29 Score=246.62 Aligned_cols=244 Identities=15% Similarity=0.145 Sum_probs=160.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+.+.+|+.||||++++...... ... +. +..
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------------------~~~--------~~------~~~ 55 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL----------------------KQV--------EH------TND 55 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----------------------TCH--------HH------HHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------------------hHH--------HH------HHH
Confidence 789999999999999998999999999874311100 000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.. + .++. +.+++ .......++||||++|++|.++.... .........+..++..+|.|||++|++
T Consensus 56 E~~~l~~----l-~hp~--Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 128 (318)
T 1fot_A 56 ERLMLSI----V-THPF--IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDII 128 (318)
T ss_dssp HHHHHHS----C-CBTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHhh----C-CCCC--CceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 1111111 1 2222 22222 22345678999999999998875432 122334455667888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|||+||+|||++.+|.++|+|||+++....... . ..+++..+++++...+..+.++|+||+|+.+++++++
T Consensus 129 HrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~-~--------~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g 199 (318)
T 1fot_A 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVTY-T--------LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199 (318)
T ss_dssp CCCCCGGGEEECTTSCEEECCCSSCEECSSCBC-C--------CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHS
T ss_pred ccCCChheEEEcCCCCEEEeecCcceecCCccc-c--------ccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhC
Confidence 999999999999999999999999987654211 1 1223334444444445567889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+.......+.. .....| ...++++++.+
T Consensus 200 ~--~pf~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~~~~~~~li 234 (318)
T 1fot_A 200 Y--TPFYDSNTMKTYEKILN----AELRFP---------------------------------------PFFNEDVKDLL 234 (318)
T ss_dssp S--CTTCCSSHHHHHHHHHH----CCCCCC---------------------------------------TTSCHHHHHHH
T ss_pred C--CCCCCCCHHHHHHHHHh----CCCCCC---------------------------------------CCCCHHHHHHH
Confidence 3 34444333322222211 001111 12467888899
Q ss_pred HHHHhhcCcccc-----cccchhhccccc
Q 011399 451 VELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
.+||.+||..|+ +..+...|+||.
T Consensus 235 ~~lL~~dp~~R~~~~~~~~~~i~~hp~f~ 263 (318)
T 1fot_A 235 SRLITRDLSQRLGNLQNGTEDVKNHPWFK 263 (318)
T ss_dssp HHHTCSCTTTCTTSSTTTTHHHHTSGGGS
T ss_pred HHHhccCHHHcCCCcCCCHHHHhcCcccc
Confidence 999999999999 566778899984
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-28 Score=242.35 Aligned_cols=281 Identities=19% Similarity=0.181 Sum_probs=169.5
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCCh--------HHHHHHHHHHHHHHHHHHhhhhhcccCCHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGI--------EEAIGLDFYLIRGVGFLINKYVDIITTDVV 195 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~--------~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~ 195 (487)
..+.|+.. +.||+|+||.||+|+++.+|+.||||+++... ......++.+++.+.. ..|+|++
T Consensus 7 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-------~~h~niv 77 (308)
T 3g33_A 7 ATSRYEPV--AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA-------FEHPNVV 77 (308)
T ss_dssp ---CCEEE--EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHH-------HCCTTBC
T ss_pred cccceEEE--EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhh-------cCCCCeE
Confidence 34445555 78999999999999998899999999986321 1111222222222111 0122222
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCC----CceEEEeecCCCCcCcHHHHHhc-CCCH-
Q 011399 196 ALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNEQVAIESQ-GLKV- 269 (487)
Q Consensus 196 ~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~----~~~LvmE~~~G~~L~~~~~~~~~-~~~~- 269 (487)
. +-.++....+ ..++||||++| +|.++...... +.+.
T Consensus 78 ~------------------------------------~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~ 120 (308)
T 3g33_A 78 R------------------------------------LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAE 120 (308)
T ss_dssp C------------------------------------EEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHH
T ss_pred E------------------------------------eeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHH
Confidence 2 1122222111 35899999986 77766432211 1333
Q ss_pred -HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc
Q 011399 270 -LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL 348 (487)
Q Consensus 270 -~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (487)
...+..++..+|.|||+.|++|||+||+||+++.+|.++|+|||++..+...... .....+..+..|| ....
T Consensus 121 ~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE-----~~~~ 193 (308)
T 3g33_A 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--TPVVVTLWYRAPE-----VLLQ 193 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCS--GGGGCCCSSCCHH-----HHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCccc--CCccccccccCch-----HHcC
Confidence 4455678889999999999999999999999999999999999999876533211 0111122233444 3445
Q ss_pred CCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCC-CCChHHHHHHHHHHHHHHhhhhhCCCCChH
Q 011399 349 DFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPF-NVPAYYALILRSLTVLEGLALYADPNFKVL 427 (487)
Q Consensus 349 g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (487)
+..++++|+||+|+.+++++++. .++...+.......+.......+. ..|...... . ..+.+..
T Consensus 194 ~~~~~~~DiwslG~il~~l~~g~--~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~--- 258 (308)
T 3g33_A 194 STYATPVDMWSVGCIFAEMFRRK--PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP-------R---GAFPPRG--- 258 (308)
T ss_dssp SCCCSTHHHHHHHHHHHHTTTSS--CSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSC-------G---GGSCCCC---
T ss_pred CCCCchHHHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHHHhCCCChhhccchhhcc-------c---cccCCCC---
Confidence 55688999999999999998743 455555544444444333321111 111110000 0 0000000
Q ss_pred HhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 428 AASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 428 ~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
..+ ...+....++.+++.+.+||..||.+|++..+.+.|+||.-+
T Consensus 259 --~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 259 --PRP--VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303 (308)
T ss_dssp --CCC--HHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred --CCc--HHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence 001 123345678999999999999999999999999999999643
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=248.50 Aligned_cols=302 Identities=15% Similarity=0.105 Sum_probs=164.7
Q ss_pred CCCHHhhhcccCCcccccccccEEEEEEEc--cCCcEEEEEEecCCh-HHHHHHHHHHHHHHHHHHhhhhhcccCCHHHH
Q 011399 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLK--YSGQIVAVKVQRPGI-EEAIGLDFYLIRGVGFLINKYVDIITTDVVAL 197 (487)
Q Consensus 121 g~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~-~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~ 197 (487)
...+.+.|... .+.||+|+||.||+|+++ .+|+.||||++.... ...+..++.+++. ..|+|++.+
T Consensus 15 ~~~~~~~y~~~-g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~----------l~hpniv~~ 83 (405)
T 3rgf_A 15 RERVEDLFEYE-GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRE----------LKHPNVISL 83 (405)
T ss_dssp CCCHHHHEECS-SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHH----------CCCTTBCCC
T ss_pred hhhhhhhhhhc-CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHh----------cCCCCeeeE
Confidence 45677777644 367999999999999976 468999999986431 1111122221111 113333322
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHHHh----------cC
Q 011399 198 IDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIES----------QG 266 (487)
Q Consensus 198 ~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~----------~~ 266 (487)
+ .++. ......++||||++| +|.+...... ..
T Consensus 84 ~------------------------------------~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~ 126 (405)
T 3rgf_A 84 Q------------------------------------KVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP 126 (405)
T ss_dssp C------------------------------------EEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CC
T ss_pred e------------------------------------eEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCC
Confidence 2 1221 224567899999987 5555433221 22
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEE----cCCCcEEEEecCCCCCCCHHHHH--HHHHHHHHHHhcCHHH
Q 011399 267 LKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLA----TPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEA 340 (487)
Q Consensus 267 ~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili----~~~g~i~l~DFGla~~l~~~~~~--~~~~~~~~~~~~~~~~ 340 (487)
......+..++..||.|||+.||+||||||+|||+ +.+|.++|+|||++..+...... .......+..+..||.
T Consensus 127 ~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~ 206 (405)
T 3rgf_A 127 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL 206 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchh
Confidence 22345566788899999999999999999999999 67789999999999887543211 1111112233444544
Q ss_pred HHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcH---------HHHHHHHHHHHhhCCCCCChHHHHHHHHHH
Q 011399 341 MARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNF---------KTIVDGLGAVLYQYPFNVPAYYALILRSLT 411 (487)
Q Consensus 341 ~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~ 411 (487)
+. ..+..+.++|+||+|+.+++++++.. ++...+. ...+..+...+.......-+.+..+.....
T Consensus 207 ~~----~~~~~~~~~DiwSlG~il~ell~g~~--pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~ 280 (405)
T 3rgf_A 207 LL----GARHYTKAIDIWAIGCIFAELLTSEP--IFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHST 280 (405)
T ss_dssp HT----TCCSCCHHHHHHHHHHHHHHHHHSSC--TTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHH
T ss_pred hc----CCCcccchhhhHHHHHHHHHHHhCCC--CCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhh
Confidence 31 12346778999999999999998543 3322111 122222222221100000000000000000
Q ss_pred HHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccccc
Q 011399 412 VLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCD 481 (487)
Q Consensus 412 ~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~ 481 (487)
..........+.... ..++ .......++.+++.+.+||..||.+|++..+.+.|+||.-++.+..
T Consensus 281 ~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~~~ 345 (405)
T 3rgf_A 281 LMKDFRRNTYTNCSL----IKYM-EKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTS 345 (405)
T ss_dssp HHHHCCGGGGTTCCH----HHHH-HTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCCCS
T ss_pred hhhhccccCCCcchh----hhhH-hhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCCcc
Confidence 000000111111111 1111 1122345789999999999999999999999999999987776654
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-29 Score=250.31 Aligned_cols=249 Identities=16% Similarity=0.142 Sum_probs=158.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+.+.+|+.||||++++..... .... .. +..
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~~~--------~~------~~~ 54 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----------------------KDEV--------AH------TVT 54 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----------------------TTCH--------HH------HHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh----------------------hhHH--------HH------HHH
Confidence 78999999999999999899999999986321100 0000 00 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|.+.+.++ .++.+.-..-+.......++||||++|++|.+...... ........+..++..+|.|||++|++||
T Consensus 55 E~~~l~~l-----~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 129 (337)
T 1o6l_A 55 ESRVLQNT-----RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129 (337)
T ss_dssp HHHHHHSC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHHhC-----CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 22222211 23332221222233456799999999999987654321 2233445566788899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.++|+|||+++........ . ....+.+..+++++..-+..+.++|+||+|+.+++++++.
T Consensus 130 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~-~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~- 202 (337)
T 1o6l_A 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGAT-M-----KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR- 202 (337)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCSCCTTCC-B-----CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSS-
T ss_pred cCCHHHEEECCCCCEEEeeccchhhcccCCCc-c-----cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCC-
Confidence 99999999999999999999999864321100 0 0112233344444444444578899999999999999843
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+...+...+.. .....| ...++++++.+.+
T Consensus 203 -~Pf~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~s~~~~~li~~ 238 (337)
T 1o6l_A 203 -LPFYNQDHERLFELILM----EEIRFP---------------------------------------RTLSPEAKSLLAG 238 (337)
T ss_dssp -CSSCCSSHHHHHHHHHH----CCCCCC---------------------------------------TTSCHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHc----CCCCCC---------------------------------------CCCCHHHHHHHHH
Confidence 34544443333222211 011111 1246677788888
Q ss_pred HHhhcCcccc-----cccchhhccccc
Q 011399 453 LLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
||.+||..|+ +..+.+.|+||.
T Consensus 239 lL~~dP~~R~g~~~~~~~ei~~h~~f~ 265 (337)
T 1o6l_A 239 LLKKDPKQRLGGGPSDAKEVMEHRFFL 265 (337)
T ss_dssp HTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred HhhcCHHHhcCCCCCCHHHHHcCCCcC
Confidence 8888888887 566777788873
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.5e-28 Score=239.25 Aligned_cols=257 Identities=16% Similarity=0.180 Sum_probs=155.0
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.+.||+|+||.||+|+++.+|+.||||++..........++.+++.+. .|+|++.++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~---------~h~niv~~~-------------- 72 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE---------GHPNIVKLH-------------- 72 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTT---------TCTTBCCEE--------------
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhc---------CCCCeeEEE--------------
Confidence 478999999999999999899999999987543333222222221110 122222221
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~giv 290 (487)
-+.......++||||++|++|.+..... ...+ ....+..++..++.|||+.|++
T Consensus 73 -----------------------~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iv 128 (325)
T 3kn6_A 73 -----------------------EVFHDQLHTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVGVV 128 (325)
T ss_dssp -----------------------EEEECSSEEEEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred -----------------------EEEEcCCEEEEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 1223345678999999999998875432 2233 3445567888999999999999
Q ss_pred ccCCCCCCeEEcCCC---cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 291 HADPHPGNLLATPEG---KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 291 H~Dlkp~Nili~~~g---~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|||+||+|||++.++ .++|+|||++......... ...... ++..++++.....-.++++|+||+|+.++++
T Consensus 129 H~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~-----t~~y~aPE~~~~~~~~~~~DiwslG~il~~l 202 (325)
T 3kn6_A 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCF-----TLHYAAPELLNQNGYDESCDLWSLGVILYTM 202 (325)
T ss_dssp CCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------------CCCCHHHHHHHHHHHHHHH
T ss_pred ecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-ccccCC-----CcCccCHHHhcCCCCCCccchHHHHHHHHHH
Confidence 999999999998766 7999999999866543211 111111 2333444444444457788999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+++. .|+...+... .... ...+.+.+ ....+.+.. ......+++++
T Consensus 203 l~g~--~pf~~~~~~~--------------~~~~-~~~~~~~i-------~~~~~~~~~----------~~~~~~s~~~~ 248 (325)
T 3kn6_A 203 LSGQ--VPFQSHDRSL--------------TCTS-AVEIMKKI-------KKGDFSFEG----------EAWKNVSQEAK 248 (325)
T ss_dssp HHSS--CTTC---------------------CCC-HHHHHHHH-------TTTCCCCCS----------HHHHTSCHHHH
T ss_pred HhCC--CCCCCCcccc--------------cccc-HHHHHHHH-------HcCCCCCCc----------ccccCCCHHHH
Confidence 9843 3333221100 0000 00001111 000111110 01124578999
Q ss_pred HHHHHHHhhcCcccccccchhhccccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
+.+.+||..||..|++..+.+.|+||.-.
T Consensus 249 ~li~~~L~~dP~~Rpt~~ell~h~w~~~~ 277 (325)
T 3kn6_A 249 DLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277 (325)
T ss_dssp HHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred HHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence 99999999999999999999999999654
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=233.67 Aligned_cols=263 Identities=17% Similarity=0.172 Sum_probs=165.1
Q ss_pred CCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 121 g~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
|..+.+.|+.. +.||+|+||.||+|++..+|+.||||++.......- ...+.
T Consensus 6 g~~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~~~---------------------- 57 (294)
T 4eqm_A 6 GKIINERYKIV--DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE----ETLKR---------------------- 57 (294)
T ss_dssp SSCEETTEEEE--EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCH----HHHHH----------------------
T ss_pred hhHhhccEEEE--EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccH----HHHHH----------------------
Confidence 44555566666 789999999999999988999999999854321110 00011
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTG 276 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~ 276 (487)
+.+|+..+.++ .+++ +++++ ....+..++||||++|++|.++.... ...+. ...+..+
T Consensus 58 ----------~~~e~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~q 119 (294)
T 4eqm_A 58 ----------FEREVHNSSQL-----SHQN--IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-GPLSVDTAINFTNQ 119 (294)
T ss_dssp ----------HHHHHHHHTTC-----CBTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHH
T ss_pred ----------HHHHHHHHhcC-----CCCC--CceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHH
Confidence 12222222221 1222 22222 23345678999999999999875433 23343 4445678
Q ss_pred HHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 277 i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
+..++.|+|+.|++|||+||+||+++.+|.++|+|||++..+.............+..+..||. ...+..++.+|
T Consensus 120 i~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~~~~~D 194 (294)
T 4eqm_A 120 ILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ-----AKGEATDECTD 194 (294)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHH-----HHTCCCCTTHH
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhH-----hcCCCCCchHh
Confidence 8889999999999999999999999999999999999998876543221111222233444543 44455678899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .|+...+...... ..... .. |. ...
T Consensus 195 i~slG~~l~~ll~g~--~pf~~~~~~~~~~---~~~~~---~~----------------------~~----------~~~ 234 (294)
T 4eqm_A 195 IYSIGIVLYEMLVGE--PPFNGETAVSIAI---KHIQD---SV----------------------PN----------VTT 234 (294)
T ss_dssp HHHHHHHHHHHHHSS--CSSCSSCHHHHHH---HHHSS---CC----------------------CC----------HHH
T ss_pred HHHHHHHHHHHHhCC--CCCCCCChHHHHH---HHhhc---cC----------------------CC----------cch
Confidence 999999999999843 4554443222110 00000 00 10 011
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
......++.+++.+.+||.+||..|++..+.+.+.+..
T Consensus 235 ~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 22234567888899999999999999888777776654
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-29 Score=253.39 Aligned_cols=261 Identities=18% Similarity=0.211 Sum_probs=165.8
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+...|.....+.||+|+||+||+|++..+|+.||||+++...... .+
T Consensus 85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~----~~----------------------------- 131 (373)
T 2x4f_A 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD----KE----------------------------- 131 (373)
T ss_dssp GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHH----HH-----------------------------
T ss_pred cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccccc----HH-----------------------------
Confidence 444555444578999999999999998899999999997642211 00
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSL 281 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l 281 (487)
.+.+|...+.++ .++++.-..-+....+..+|||||++|++|.+.........+.. ..+..++..+|
T Consensus 132 ------~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL 200 (373)
T 2x4f_A 132 ------EVKNEISVMNQL-----DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGI 200 (373)
T ss_dssp ------HHHHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHhC-----CCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 012222222222 12222111112333466799999999999987754433334443 34456888999
Q ss_pred HHHHHCCccccCCCCCCeEE--cCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 282 RQLLEYGYFHADPHPGNLLA--TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili--~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
.|||+.|++||||||+|||+ +.++.++|+|||+++.+....... ...+.+..++++....+..+.++|+||
T Consensus 201 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~-------~~~gt~~y~aPE~~~~~~~~~~~Diws 273 (373)
T 2x4f_A 201 RHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK-------VNFGTPEFLAPEVVNYDFVSFPTDMWS 273 (373)
T ss_dssp HHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC-------CCCSSCTTCCHHHHTTCBCCHHHHHHH
T ss_pred HHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc-------cccCCCcEeChhhccCCCCCcHHhHHH
Confidence 99999999999999999999 567889999999998775432110 001222333344444556677899999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+|+.+++++++. .++...+....+..+... ....++ ...
T Consensus 274 lG~il~elltg~--~pf~~~~~~~~~~~i~~~----~~~~~~-----------------------------------~~~ 312 (373)
T 2x4f_A 274 VGVIAYMLLSGL--SPFLGDNDAETLNNILAC----RWDLED-----------------------------------EEF 312 (373)
T ss_dssp HHHHHHHHHHSS--CTTCCSSHHHHHHHHHHT----CCCSCS-----------------------------------GGG
T ss_pred HHHHHHHHHhCC--CCCCCCCHHHHHHHHHhc----cCCCCh-----------------------------------hhh
Confidence 999999999843 344444433222222110 000000 011
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
...++++++.+.+||..||..|++..+.+.|+||.-.
T Consensus 313 ~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 313 QDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred ccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 2457889999999999999999999999999999654
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-28 Score=248.06 Aligned_cols=250 Identities=16% Similarity=0.132 Sum_probs=162.2
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|... +.||+|+||.||+|+++.+|+.||||++++..... .... +.
T Consensus 43 y~~~--~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------~~~~--------~~--- 87 (350)
T 1rdq_E 43 FDRI--KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK----------------------LKQI--------EH--- 87 (350)
T ss_dssp EEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----------------------TTCH--------HH---
T ss_pred CEEE--EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc----------------------HHHH--------HH---
Confidence 4444 78999999999999999899999999986321100 0000 01
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
+.+|.+.+.++ +++.+.-..-+.......++||||++|++|.++.... .........+..++..+|.|||+
T Consensus 88 ---~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~ 159 (350)
T 1rdq_E 88 ---TLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159 (350)
T ss_dssp ---HHHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhC-----CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11222222111 2232221111223345679999999999998875432 12233445566888899999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
+||+||||||+|||++.+|.++|+|||+++.+..... . ..+.+..++++.......++++|+||+|+.+++
T Consensus 160 ~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~-~--------~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 230 (350)
T 1rdq_E 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-T--------LCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230 (350)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC-C--------CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred CCcccccCccceEEECCCCCEEEcccccceeccCCcc-c--------ccCCccccCHHHhcCCCCCCcCCEecccHhHhH
Confidence 9999999999999999999999999999987654321 1 123334444444444455788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++. .|+...+...+...+.. .....| ...++.+
T Consensus 231 ll~g~--~Pf~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~~~~~ 265 (350)
T 1rdq_E 231 MAAGY--PPFFADQPIQIYEKIVS----GKVRFP---------------------------------------SHFSSDL 265 (350)
T ss_dssp HHHSS--CSSCCSSHHHHHHHHHH----CCCCCC---------------------------------------TTCCHHH
T ss_pred HhhCC--CCCCCCCHHHHHHHHHc----CCCCCC---------------------------------------CCCCHHH
Confidence 99853 34444443333222211 001111 1346778
Q ss_pred HHHHHHHHhhcCccccc-----ccchhhccccc
Q 011399 447 RDALVELLFKDGRFRHV-----LYSPFTINLVD 474 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~-----~~~~~~~~~~~ 474 (487)
++.+.+||..||..|++ ..+...|+||.
T Consensus 266 ~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~ 298 (350)
T 1rdq_E 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred HHHHHHHhhcCHHhccCCccCCHHHHHhCcCcC
Confidence 88888889999998887 55667888884
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-28 Score=246.66 Aligned_cols=257 Identities=15% Similarity=0.090 Sum_probs=159.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++......- .+. .. +..
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~-~~~-----------------------------~~------~~~ 101 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-EDI-----------------------------DW------VQT 101 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----C-----------------------------CH------HHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH-HHH-----------------------------HH------HHH
Confidence 789999999999999998999999999874321100 000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.++ .+++.+.-..-+....+..++||||++|++|.+..... .........+..++..+|.|||+.||+||
T Consensus 102 E~~il~~~----~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHr 177 (396)
T 4dc2_A 102 EKHVFEQA----SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 177 (396)
T ss_dssp HHHHHHHH----TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHHhc----CCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 22221111 12333222122223346679999999999998765432 22334455667888999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCC-HHH-HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETP-EEA-RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||+|||++.+|.+||+|||+++... ... ...+ .+.+..+++++..-...+.++|+||+|+.+++++++
T Consensus 178 DLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~--------~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G 249 (396)
T 4dc2_A 178 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF--------CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249 (396)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCC--------CBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred cCCHHHEEECCCCCEEEeecceeeecccCCCccccc--------cCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998632 211 1111 233444444444444557889999999999999985
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+..... ...... .+.+.. ....+.+ ....++++++.+
T Consensus 250 ~--~Pf~~~~~~~~~-----------~~~~~~--~~~~~i-------~~~~~~~--------------p~~~s~~~~~li 293 (396)
T 4dc2_A 250 R--SPFDIVGSSDNP-----------DQNTED--YLFQVI-------LEKQIRI--------------PRSLSVKAASVL 293 (396)
T ss_dssp S--CSSTTTTC-----------------CCHH--HHHHHH-------HHCCCCC--------------CTTSCHHHHHHH
T ss_pred C--CCCccccccccc-----------chhhHH--HHHHHH-------hccccCC--------------CCcCCHHHHHHH
Confidence 3 333221100000 000000 000000 0000110 113477888999
Q ss_pred HHHHhhcCcccccc------cchhhccccc
Q 011399 451 VELLFKDGRFRHVL------YSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~------~~~~~~~~~~ 474 (487)
.+||.+||.+|++. .+...|+||.
T Consensus 294 ~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~ 323 (396)
T 4dc2_A 294 KSFLNKDPKERLGCHPQTGFADIQGHPFFR 323 (396)
T ss_dssp HHHTCSCTTTSTTCSTTTHHHHHHHSTTTT
T ss_pred HHHhcCCHhHcCCCCCCCCHHHHhcCcccc
Confidence 99999999999985 4778899984
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-28 Score=255.04 Aligned_cols=261 Identities=14% Similarity=0.147 Sum_probs=168.0
Q ss_pred CCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 122 ~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
..+.+.|... +.||+|+||.||+|.++.+|+.||+|++....... .+..
T Consensus 7 ~~~~~~Y~i~--~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~--~~~~--------------------------- 55 (444)
T 3soa_A 7 TRFTEEYQLF--EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA--RDHQ--------------------------- 55 (444)
T ss_dssp CHHHHHEEEE--EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH--HHHH---------------------------
T ss_pred ccccCCeEEE--EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH--HHHH---------------------------
Confidence 3455556665 78999999999999999899999999987542211 0111
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQC 279 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~ 279 (487)
. +.+|+..+.++ ++++|.-..-+....+..++||||++|++|.+..... ...+ ....+..++..
T Consensus 56 --~------~~~E~~il~~l-----~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~ 121 (444)
T 3soa_A 56 --K------LEREARICRLL-----KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-EYYSEADASHCIQQILE 121 (444)
T ss_dssp --H------HHHHHHHHHHC-----CBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHH
T ss_pred --H------HHHHHHHHHhC-----CCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 1 12222222222 1222211111223345679999999999997764332 2233 34455678889
Q ss_pred HHHHHHHCCccccCCCCCCeEEc---CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLAT---PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~---~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
++.|||+.||+||||||+|||++ .++.+||+|||++..+...... ..+ ..+++..++++....+..++++|
T Consensus 122 aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~-~~~-----~~gt~~Y~APE~l~~~~~~~~~D 195 (444)
T 3soa_A 122 AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA-WFG-----FAGTPGYLSPEVLRKDPYGKPVD 195 (444)
T ss_dssp HHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB-CCC-----SCSCGGGCCHHHHTTCCBCTHHH
T ss_pred HHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCce-eec-----ccCCcccCCHHHhcCCCCCCccc
Confidence 99999999999999999999998 4678999999999877543210 000 11233334444444445678899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .|+...+...+...+... ....| .|.
T Consensus 196 IwSlGvilyell~G~--~Pf~~~~~~~~~~~i~~~----~~~~~--------------------~~~------------- 236 (444)
T 3soa_A 196 LWACGVILYILLVGY--PPFWDEDQHRLYQQIKAG----AYDFP--------------------SPE------------- 236 (444)
T ss_dssp HHHHHHHHHHHHHSS--CSCCCSSHHHHHHHHHHT----CCCCC--------------------TTT-------------
T ss_pred cHHHHHHHHHHHhCC--CCCCCccHHHHHHHHHhC----CCCCC--------------------ccc-------------
Confidence 999999999999854 344444433333222110 11111 011
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
....++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 237 --~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~ 272 (444)
T 3soa_A 237 --WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272 (444)
T ss_dssp --TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred --cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence 123578899999999999999999999999999995
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-28 Score=250.71 Aligned_cols=260 Identities=13% Similarity=0.114 Sum_probs=161.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++...... .. ..-.+..
T Consensus 80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~----------------------~~--------------~~~~~~~ 123 (437)
T 4aw2_A 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK----------------------RA--------------ETACFRE 123 (437)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH----------------------TT--------------TTCCHHH
T ss_pred EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh----------------------HH--------------HHHHHHH
Confidence 78999999999999999889999999986321000 00 0001222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+..+ +++.+.--.-+.......+|||||++|++|.++........+ ....+..++..||.|||+.||+|
T Consensus 124 E~~il~~~-----~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiH 198 (437)
T 4aw2_A 124 ERDVLVNG-----DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198 (437)
T ss_dssp HHHHHHHS-----CTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHhC-----CCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 33222221 233322222223345667999999999999887543223333 44556788889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
|||||+|||++.+|.+||+|||+++.+.............+..+..||.+...-...+..++++|+||+|+.+++++++.
T Consensus 199 rDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~ 278 (437)
T 4aw2_A 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278 (437)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSS
T ss_pred cccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCC
Confidence 99999999999999999999999976643311000001112234445544321111344578899999999999999843
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.|+...+.......+...... +.. |.. ....++++++.+.
T Consensus 279 --~Pf~~~~~~~~~~~i~~~~~~--~~~----------------------p~~--------------~~~~s~~~~dLi~ 318 (437)
T 4aw2_A 279 --TPFYAESLVETYGKIMNHKER--FQF----------------------PTQ--------------VTDVSENAKDLIR 318 (437)
T ss_dssp --CTTCCSSHHHHHHHHHTHHHH--CCC----------------------CSS--------------CCCSCHHHHHHHH
T ss_pred --CCCCCCChhHHHHhhhhcccc--ccC----------------------Ccc--------------cccCCHHHHHHHH
Confidence 455555544433333211000 000 110 1234677777888
Q ss_pred HHHhhcCcc--cccccchhhccccc
Q 011399 452 ELLFKDGRF--RHVLYSPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~--r~~~~~~~~~~~~~ 474 (487)
+||+.+++. |.+..+.+.|+||.
T Consensus 319 ~lL~~~~~r~~r~~~~eil~Hpff~ 343 (437)
T 4aw2_A 319 RLICSREHRLGQNGIEDFKKHPFFS 343 (437)
T ss_dssp TTSSCGGGCTTTTTTHHHHTSGGGT
T ss_pred HHhcccccccCCCCHHHHhCCCccC
Confidence 888776665 67777778888883
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-27 Score=241.49 Aligned_cols=250 Identities=15% Similarity=0.086 Sum_probs=160.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++...... .... +. +..
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~----------------------~~~~--------~~------~~~ 69 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ----------------------DDDV--------EC------TMV 69 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH----------------------TTCH--------HH------HHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc----------------------chHH--------HH------HHH
Confidence 78999999999999999889999999987431100 0000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|.+.+. ....++.+.-..-+.......++||||++|++|.++.... .........+..++..||.|||+.||+||
T Consensus 70 E~~~l~----~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr 145 (353)
T 2i0e_A 70 EKRVLA----LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145 (353)
T ss_dssp HHHHHT----CTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHH----hcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 111111 1123333322222233446679999999999998875432 22333455667888899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.++|+|||+++........ .....+.+..+++++...+-.+..+|+||+|+.+++++++.
T Consensus 146 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~- 218 (353)
T 2i0e_A 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVT------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ- 218 (353)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCCCCTTCC------BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSS-
T ss_pred cCCHHHEEEcCCCcEEEEeCCcccccccCCcc------cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCC-
Confidence 99999999999999999999999864321100 00112234444444444445578899999999999999843
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+...+...+...+.. .....| ...++++++.+.+
T Consensus 219 -~Pf~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~s~~~~~li~~ 254 (353)
T 2i0e_A 219 -APFEGEDEDELFQSIME----HNVAYP---------------------------------------KSMSKEAVAICKG 254 (353)
T ss_dssp -CSSCCSSHHHHHHHHHH----CCCCCC---------------------------------------TTSCHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHh----CCCCCC---------------------------------------CCCCHHHHHHHHH
Confidence 45554444333322221 011111 1346778888888
Q ss_pred HHhhcCcccccc-----cchhhccccc
Q 011399 453 LLFKDGRFRHVL-----YSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~~-----~~~~~~~~~~ 474 (487)
||.+||..|++. .+...|+||.
T Consensus 255 lL~~dP~~R~~~~~~~~~~i~~h~~f~ 281 (353)
T 2i0e_A 255 LMTKHPGKRLGCGPEGERDIKEHAFFR 281 (353)
T ss_dssp HTCSCTTSCTTCSTTHHHHHHTSGGGT
T ss_pred HhhcCHHHcCCCCCCCHHHHhcCcccc
Confidence 888888888853 5667788884
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-27 Score=250.02 Aligned_cols=252 Identities=17% Similarity=0.165 Sum_probs=161.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++...... ... +..+..
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~----------------------~~~--------------~~~~~~ 233 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------RKG--------------EAMALN 233 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----------------------TTC--------------HHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh----------------------hHH--------------HHHHHH
Confidence 67999999999999999899999999986321100 000 001222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ +++.+.-..-+.......++||||++|++|.+...... .+.+. ...+..++..||.|||++||+
T Consensus 234 E~~iL~~l-----~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIv 308 (576)
T 2acx_A 234 EKQILEKV-----NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIV 308 (576)
T ss_dssp HHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHc-----CCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 33333322 22332211122233456799999999999987643221 12443 445567888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||||+|||++.+|.++|+|||++..+...... .. ..+++..+++++...+..+.++|+||+|+.+++++++
T Consensus 309 HrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~--~~-----~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG 381 (576)
T 2acx_A 309 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI--KG-----RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381 (576)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE--EC-----CCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHS
T ss_pred ccCCchheEEEeCCCCeEEEecccceecccCccc--cc-----cCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhC
Confidence 9999999999999999999999999877543210 00 1223444444444444457889999999999999985
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+.......+...+.. ..+.+ ....++++++.+
T Consensus 382 ~--~PF~~~~~~~~~~~i~~~i~~-------------------------~~~~~--------------p~~~s~~~~dLI 420 (576)
T 2acx_A 382 Q--SPFQQRKKKIKREEVERLVKE-------------------------VPEEY--------------SERFSPQARSLC 420 (576)
T ss_dssp S--CSSSCSSSCCCHHHHHHHHHH-------------------------CCCCC--------------CTTSCHHHHHHH
T ss_pred C--CCCcccccchhHHHHHHHhhc-------------------------ccccC--------------CccCCHHHHHHH
Confidence 4 333322100000011111100 11111 123578889999
Q ss_pred HHHHhhcCcccc-----cccchhhccccc
Q 011399 451 VELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
.+||.+||..|+ +..+...|+||.
T Consensus 421 ~~lL~~dP~~R~g~~~~sa~eil~HpfF~ 449 (576)
T 2acx_A 421 SQLLCKDPAERLGCRGGSAREVKEHPLFK 449 (576)
T ss_dssp HHHTCSSGGGSTTCSSSHHHHHHTSGGGT
T ss_pred HHhccCCHHHcCCCCCCCHHHHHhChhhc
Confidence 999999999999 567888999995
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-28 Score=255.06 Aligned_cols=195 Identities=19% Similarity=0.235 Sum_probs=114.3
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|... +.||+|+||.||+|+++.+|+.||||++........ +. +.
T Consensus 53 ~~y~~~--~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~-----------------------------~~- 98 (458)
T 3rp9_A 53 DRYEIR--HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI--DC-----------------------------KR- 98 (458)
T ss_dssp TTEEEC--CC-------CEEEEEECC--CEEEEEEECSTTSSHH--HH-----------------------------HH-
T ss_pred CCeEEe--eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHH--HH-----------------------------HH-
Confidence 445544 789999999999999998999999999865322110 00 01
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCC-eEeceeee----cCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKED-VLVPDIFW----DYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQC 279 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~-v~vP~v~~----~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~ 279 (487)
+.+|.+.+.++ .+++ +.+-.++. +.....|+||||++| +|.++.... .........+..++..
T Consensus 99 -----~~~E~~~l~~l-----~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~~~~qi~~ 167 (458)
T 3rp9_A 99 -----ILREIAILNRL-----NHDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTELHIKTLLYNLLV 167 (458)
T ss_dssp -----HHHHHHHHHHC-----CCTTBCCEEEECCCSCTTTCCCEEEEECCCSE-EHHHHHHSSCCCCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhC-----CCCCCCceEEEEecCCcccCceEEEEEecccc-chhhhcccCCCCCHHHHHHHHHHHHH
Confidence 11222222222 1111 11111111 112457999999865 666553211 1122344566788999
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH--------------------------HHHHHHHHHHH
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--------------------------RFAIIGHVVHM 333 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~--------------------------~~~~~~~~~~~ 333 (487)
||.|||+.||+||||||+|||++.+|.+||+|||+++.+.... ...+.+.+.+.
T Consensus 168 aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 247 (458)
T 3rp9_A 168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTR 247 (458)
T ss_dssp HHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCC
T ss_pred HHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccc
Confidence 9999999999999999999999999999999999998764210 01122222233
Q ss_pred HhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 334 VNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 334 ~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
.+..||.+ ...+..+.++|+||+||.++++++
T Consensus 248 ~Y~aPE~~----~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 248 WYRAPELI----LLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TTCCHHHH----TTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cccChHHh----hCCCCCCcHhHHHHHHHHHHHHHH
Confidence 44555543 123446788999999999999996
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-28 Score=244.99 Aligned_cols=264 Identities=15% Similarity=0.176 Sum_probs=169.9
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|... +.||+|+||.||+|+++.+|+.||||+++......... ....
T Consensus 8 ~~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~-------------------~~~~-------- 58 (326)
T 2y0a_A 8 NVDDYYDTG--EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR-------------------GVSR-------- 58 (326)
T ss_dssp CHHHHEEEE--EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSS-------------------SBCH--------
T ss_pred CcccceEec--eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccc-------------------hhhH--------
Confidence 345556655 78999999999999999899999999986542110000 0000
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCS 280 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~ 280 (487)
+. +.+|...+.++ .++++.-..-+.......++||||++|++|.++... ....+ ....+..++..+
T Consensus 59 ~~------~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~a 126 (326)
T 2y0a_A 59 ED------IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNG 126 (326)
T ss_dssp HH------HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHhC-----CCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHH
Confidence 01 12222222222 122221111122334567999999999999887432 12233 344556788889
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCC----cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEG----KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g----~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
|.|||+.|++|||+||+||+++.+| .++|+|||++..+...... .. ..+++..++++....+..++++|
T Consensus 127 l~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~-----~~gt~~y~aPE~~~~~~~~~~~D 199 (326)
T 2y0a_A 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN-----IFGTPEFVAPEIVNYEPLGLEAD 199 (326)
T ss_dssp HHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCC--CC-----CCSCTTTCCHHHHTTCCCCTHHH
T ss_pred HHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCcc--cc-----ccCCcCcCCceeecCCCCCcHHH
Confidence 9999999999999999999999887 7999999999876532110 00 11223334444444555678899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .|+...+.......+.. .....|+
T Consensus 200 iwslG~il~~ll~g~--~pf~~~~~~~~~~~~~~----~~~~~~~----------------------------------- 238 (326)
T 2y0a_A 200 MWSIGVITYILLSGA--SPFLGDTKQETLANVSA----VNYEFED----------------------------------- 238 (326)
T ss_dssp HHHHHHHHHHHHHSC--CSSCCSSHHHHHHHHHH----TCCCCCH-----------------------------------
T ss_pred HHHHHHHHHHHHHCc--CCCCCCCHHHHHHHHHh----cCCCcCc-----------------------------------
Confidence 999999999999843 34444333332222211 1111111
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
......++.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 239 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 277 (326)
T 2y0a_A 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277 (326)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred cccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence 112245788899999999999999999999999999963
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-28 Score=241.21 Aligned_cols=255 Identities=18% Similarity=0.186 Sum_probs=158.2
Q ss_pred hhcccCCcccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 127 IFSSISPSPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 127 ~f~~~~~~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
-|+.. +.||+|+||.||+|+.. .+|+.||||+++......-..+. .
T Consensus 18 ~y~~~--~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~-----------------------------~ 66 (327)
T 3a62_A 18 CFELL--RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDT-----------------------------A 66 (327)
T ss_dssp GEEEE--EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------------------------------
T ss_pred HeEEE--EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHH-----------------------------H
Confidence 34444 78999999999999984 58999999999754211100000 0
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLR 282 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~ 282 (487)
.+..|...+.++ .++++.-..-+....+..++||||++|++|.+...... ........+..++..+|.
T Consensus 67 ------~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~ 135 (327)
T 3a62_A 67 ------HTKAERNILEEV-----KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135 (327)
T ss_dssp ----------HHHHHHHC-----CCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHhC-----CCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 012222222222 12322111112233566799999999999987754321 122334455678888999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
|||+.|++||||||+|||++.+|.++|+|||++......... .....+.+..++++....+..+.++|+||+|+
T Consensus 136 ~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 209 (327)
T 3a62_A 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV------THTFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209 (327)
T ss_dssp HHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHH
T ss_pred HHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCcc------ccccCCCcCccCHhhCcCCCCCCcccchhHHH
Confidence 999999999999999999999999999999999765332110 01112233344444444455678899999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+++++++. .++...+.......+.. .....| ...
T Consensus 210 il~el~~g~--~pf~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~ 244 (327)
T 3a62_A 210 LMYDMLTGA--PPFTGENRKKTIDKILK----CKLNLP---------------------------------------PYL 244 (327)
T ss_dssp HHHHHHHSS--CSCCCSSHHHHHHHHHH----TCCCCC---------------------------------------TTS
T ss_pred HHHHHHHCC--CCCCCCCHHHHHHHHHh----CCCCCC---------------------------------------CCC
Confidence 999999843 45544443333222211 011111 124
Q ss_pred CHHHHHHHHHHHhhcCcccc-----cccchhhccccc
Q 011399 443 NPYLRDALVELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
++.+++.+.+||.+||..|+ +..+.+.|+||.
T Consensus 245 ~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~ 281 (327)
T 3a62_A 245 TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281 (327)
T ss_dssp CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGS
T ss_pred CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCccc
Confidence 67788899999999999999 556888999995
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-28 Score=243.24 Aligned_cols=286 Identities=18% Similarity=0.219 Sum_probs=169.0
Q ss_pred hCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHH
Q 011399 120 LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199 (487)
Q Consensus 120 lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~ 199 (487)
.+..+.+.|+.. +.||+|+||.||+|++. +|+.||||+++......
T Consensus 15 ~~q~l~~~y~~~--~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~------------------------------- 60 (311)
T 3niz_A 15 YFQGLMEKYQKL--EKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDE------------------------------- 60 (311)
T ss_dssp CEECSSCEEEEE--EEEEECSSCEEEEEEET-TSCEEEEEEEC-------------------------------------
T ss_pred eecchHhhhHhh--hhccCCCCeEEEEEEEC-CCCEEEEEEEecccccc-------------------------------
Confidence 344444555555 78999999999999997 79999999987432110
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHH
Q 011399 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNT 275 (487)
Q Consensus 200 ~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~ 275 (487)
..... +.+|...+.++ .+++ +.+++ .......++||||++| ++.+.......+.+. ...+..
T Consensus 61 ~~~~~------~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~ 126 (311)
T 3niz_A 61 GIPST------AIREISLLKEL-----HHPN--IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLY 126 (311)
T ss_dssp CHHHH------HHHHHHHHHHC-----CCTT--BCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHH
T ss_pred hhhHH------HHHHHHHHHHc-----CCCC--EeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHH
Confidence 00011 12222222222 1222 22222 2234567899999997 555543322223443 344567
Q ss_pred HHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 011399 276 GIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV 355 (487)
Q Consensus 276 ~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (487)
++..+|.|||+.|++|||+||+|||++.+|.++|+|||++..+...... ......+..+..||.+. .....+.++
T Consensus 127 qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~y~aPE~~~----~~~~~~~~~ 201 (311)
T 3niz_A 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS-YTHEVVTLWYRAPDVLM----GSKKYSTSV 201 (311)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC----CCCCCCTTCCHHHHT----TCCSCCTHH
T ss_pred HHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc-ccCCcccCCcCCHHHhc----CCCCCCchH
Confidence 8889999999999999999999999999999999999999876432111 01111122334444331 123457789
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCC-CCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHH
Q 011399 356 DVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPF-NVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYF 434 (487)
Q Consensus 356 Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~ 434 (487)
|+||+|+.+++++++. .++...+.......+...+..... ..|.. . .+ ....+..+.... ..++
T Consensus 202 DiwslG~il~~ll~g~--~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~----~~------~~~~~~~~~~~~-~~~~- 266 (311)
T 3niz_A 202 DIWSIGCIFAEMITGK--PLFPGVTDDDQLPKIFSILGTPNPREWPQV-Q----EL------PLWKQRTFQVFE-KKPW- 266 (311)
T ss_dssp HHHHHHHHHHHHHHSS--CSCCCSSTTTHHHHHHHHHCCCCTTTSGGG-T----TS------HHHHSCCCCCCC-CCCH-
T ss_pred HhHHHHHHHHHHHhCC--CCCCCCChHHHHHHHHHHHCCCChHHhhhh-h----cc------chhhhccccccc-CCcH-
Confidence 9999999999999854 344333322333333333221111 11110 0 00 000001111100 0111
Q ss_pred HHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 435 AKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 435 ~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.......++++++.+.+||..||++|++..+.+.|+||.
T Consensus 267 -~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~ 305 (311)
T 3niz_A 267 -SSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305 (311)
T ss_dssp -HHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred -HHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence 223345688999999999999999999999999999995
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.8e-29 Score=246.82 Aligned_cols=251 Identities=12% Similarity=0.127 Sum_probs=166.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||+|+++...... . . +.+
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----~-----------------------------~------~~~ 50 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ-----V-----------------------------L------VKK 50 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH-----H-----------------------------H------HHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCcccH-----H-----------------------------H------HHH
Confidence 67999999999999999899999999987542211 0 0 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ .++++.-..-+....+..++||||++|++|.+.........+. ...+..++..++.|||+.|++|
T Consensus 51 E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH 125 (321)
T 1tki_A 51 EISILNIA-----RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125 (321)
T ss_dssp HHHHHHHS-----CCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHhC-----CCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 22222211 1222111111122345678999999999998874332223443 3445678888999999999999
Q ss_pred cCCCCCCeEEcC--CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATP--EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~--~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
||+||+|||++. ++.++|+|||++..+.+.... ....+++..++++....+..++++|+||+|+.++++++
T Consensus 126 ~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~ 198 (321)
T 1tki_A 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF-------RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS 198 (321)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE-------EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc-------ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence 999999999997 789999999999877543210 01112333444444444555778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .|+...+...+...+.. .....|+ ......++++++.
T Consensus 199 g~--~pf~~~~~~~~~~~i~~----~~~~~~~-----------------------------------~~~~~~s~~~~~l 237 (321)
T 1tki_A 199 GI--NPFLAETNQQIIENIMN----AEYTFDE-----------------------------------EAFKEISIEAMDF 237 (321)
T ss_dssp SS--CTTCCSSHHHHHHHHHH----TCCCCCH-----------------------------------HHHTTSCHHHHHH
T ss_pred CC--CCCcCCCHHHHHHHHHc----CCCCCCh-----------------------------------hhhccCCHHHHHH
Confidence 43 35544443333322211 0111111 0112457889999
Q ss_pred HHHHHhhcCcccccccchhhcccccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDFEF 477 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~~~ 477 (487)
+.+||..||..|++..+.+.|+||.-..
T Consensus 238 i~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 238 VDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 9999999999999999999999996543
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-28 Score=246.76 Aligned_cols=295 Identities=17% Similarity=0.154 Sum_probs=170.6
Q ss_pred CCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 121 g~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
|.-..+-|... +.||+|+||.||+|++..+|+.||+|+.+........ +.+......+....|++++.+++
T Consensus 28 ~~~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~- 98 (360)
T 3eqc_A 28 GELKDDDFEKI--SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYG- 98 (360)
T ss_dssp CCCCGGGEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHH------HHHHHHHGGGGGCCCTTBCCEEE-
T ss_pred cccccccceee--eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHH------HHHHHHHHHHHHCCCCCEEEEeE-
Confidence 44444556655 7899999999999999989999999999765322110 11111111111112222222111
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQ 278 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~ 278 (487)
+....+..++||||++|++|.++.... ...+. ...+..++.
T Consensus 99 ------------------------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~ 141 (360)
T 3eqc_A 99 ------------------------------------AFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVI 141 (360)
T ss_dssp ------------------------------------EEEETTEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHH
T ss_pred ------------------------------------EEEECCEEEEEEECCCCCCHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 122345678999999999998875432 23333 345567788
Q ss_pred HHHHHHHHC-CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 279 CSLRQLLEY-GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 279 ~~l~~lh~~-givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
.++.|||+. |++|+|+||+||+++.+|.++|+|||++..+....... ..+++..++++....+..++++|+
T Consensus 142 ~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--------~~gt~~y~aPE~~~~~~~~~~~Di 213 (360)
T 3eqc_A 142 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--------FVGTRSYMSPERLQGTHYSVQSDI 213 (360)
T ss_dssp HHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC------------CCCCTTCCHHHHTTCCCSHHHHH
T ss_pred HHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccC--------CCCCCCeECHHHHcCCCCCchhhH
Confidence 899999985 99999999999999999999999999986543322111 122233334444444455778899
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++++. .|+...+...+...+...........|+......+.+ ........|...............
T Consensus 214 ~slG~il~~l~~g~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 288 (360)
T 3eqc_A 214 WSMGLSLVEMAVGR--YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL---NKFGMDSRPPMAIFELLDYIVNEP 288 (360)
T ss_dssp HHHHHHHHHHHHTS--CCSSCCCHHHHHHHHC---------------------------------CCCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCC--CCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc---cccccCCCCcccchhhhhHHhccC
Confidence 99999999999854 4555555444333222222111111221111111111 111111112222221111111110
Q ss_pred hc----cCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 438 LL----TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 438 l~----~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.. ...++++++.+.+||..||..|++..+.+.|+||.
T Consensus 289 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 329 (360)
T 3eqc_A 289 PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 329 (360)
T ss_dssp CCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred CCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence 00 12477899999999999999999999999999994
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-28 Score=252.63 Aligned_cols=252 Identities=15% Similarity=0.117 Sum_probs=160.8
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.. +.||+|+||.||+|+++.+|+.||||++++..... -.....+......+....|++++.+.
T Consensus 150 y~~~--~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~l~--------- 214 (446)
T 4ejn_A 150 FEYL--KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----KDEVAHTLTENRVLQNSRHPFLTALK--------- 214 (446)
T ss_dssp EEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-----------------CCCCCSCTTSCCEE---------
T ss_pred cEEe--EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh----hHHHHHHHHHHHHHHhCCCCeEeeEE---------
Confidence 4444 78999999999999999899999999987421100 00000000111111111222222111
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh 285 (487)
-+....+..++||||++|++|.+..... ...+ ....+..++..+|.|||
T Consensus 215 ----------------------------~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH 265 (446)
T 4ejn_A 215 ----------------------------YSFQTHDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLH 265 (446)
T ss_dssp ----------------------------EEEEETTEEEEEECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------EEEeeCCEEEEEEeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 1122345678999999999998765432 2333 34455678889999999
Q ss_pred H-CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 286 E-YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 286 ~-~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
+ .||+||||||+|||++.+|.++|+|||+++........ ... ..+++..++++....+..++++|+||+|+.+
T Consensus 266 ~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~-----~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 339 (446)
T 4ejn_A 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT-MKT-----FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 339 (446)
T ss_dssp HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC------CC-----SSSCGGGCCHHHHHTSCCCTHHHHHHHHHHH
T ss_pred hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcc-ccc-----ccCCccccCHhhcCCCCCCCccchhhhHHHH
Confidence 8 99999999999999999999999999999875332111 111 1223333444444455568899999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++++++. .|+...+...+...+.. .....| ...++
T Consensus 340 ~ell~g~--~Pf~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~~~ 374 (446)
T 4ejn_A 340 YEMMCGR--LPFYNQDHEKLFELILM----EEIRFP---------------------------------------RTLGP 374 (446)
T ss_dssp HHHHHSS--CSSCCSSHHHHHHHHHH----CCCCCC---------------------------------------TTSCH
T ss_pred HHHhhCC--CCCCCCCHHHHHHHHHh----CCCCCC---------------------------------------ccCCH
Confidence 9999843 45544443333222210 011111 12467
Q ss_pred HHHHHHHHHHhhcCcccc-----cccchhhccccc
Q 011399 445 YLRDALVELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
++++.+.+||.+||..|+ +..+.+.|+||.
T Consensus 375 ~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~ 409 (446)
T 4ejn_A 375 EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 409 (446)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred HHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcccc
Confidence 888999999999999999 788888999995
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-28 Score=247.03 Aligned_cols=262 Identities=13% Similarity=0.130 Sum_probs=165.8
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|+.. +.||+|+||.||+|+++.+|+.||||+++....... .....
T Consensus 21 ~~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~-------- 70 (351)
T 3c0i_A 21 LFEDVYELC--EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSS--------------------PGLST-------- 70 (351)
T ss_dssp CHHHHEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTS--------------------SSCCH--------
T ss_pred ccccceEEe--eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhcccc--------------------ccchH--------
Confidence 455566665 789999999999999998999999999863211000 00000
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh-c--CCCH--HHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES-Q--GLKV--LDLVNT 275 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~-~--~~~~--~~~~~~ 275 (487)
+. +.+|+..+.++ .+++ |++++ .......++||||++|++|.+...... . ..+. ...+..
T Consensus 71 ~~------~~~E~~~l~~l-----~hpn--Iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~ 137 (351)
T 3c0i_A 71 ED------LKREASICHML-----KHPH--IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137 (351)
T ss_dssp HH------HHHHHHHHHHC-----CCTT--BCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HH------HHHHHHHHHhC-----CCCC--CCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHH
Confidence 01 22233222222 1222 22222 223456799999999999977644322 1 1333 345567
Q ss_pred HHHHHHHHHHHCCccccCCCCCCeEEcCCCc---EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 276 GIQCSLRQLLEYGYFHADPHPGNLLATPEGK---LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 276 ~i~~~l~~lh~~givH~Dlkp~Nili~~~g~---i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
++..+|.|||++|++||||||+|||++.++. ++|+|||++..+...... .. ...+++..++++....+..+
T Consensus 138 qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~-~~-----~~~gt~~y~aPE~~~~~~~~ 211 (351)
T 3c0i_A 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV-AG-----GRVGTPHFMAPEVVKREPYG 211 (351)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCB-CC-----CCCSCGGGCCHHHHTTCCBC
T ss_pred HHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCee-ec-----CCcCCcCccCHHHHcCCCCC
Confidence 8889999999999999999999999987655 999999999876543110 00 01122333344444444557
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhH
Q 011399 353 PDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYP 432 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p 432 (487)
.++|+||+|+.+++++++. .|+...+ ..+...+ .......++
T Consensus 212 ~~~DiwslG~il~~ll~g~--~pf~~~~-~~~~~~i----~~~~~~~~~------------------------------- 253 (351)
T 3c0i_A 212 KPVDVWGCGVILFILLSGC--LPFYGTK-ERLFEGI----IKGKYKMNP------------------------------- 253 (351)
T ss_dssp THHHHHHHHHHHHHHHHSS--CSSCSSH-HHHHHHH----HHTCCCCCH-------------------------------
T ss_pred chHhhHHHHHHHHHHHHCC--CCCCCcH-HHHHHHH----HcCCCCCCc-------------------------------
Confidence 8899999999999999853 3333221 1111111 000111111
Q ss_pred HHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 433 YFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 433 ~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
......++.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 254 ----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~ 292 (351)
T 3c0i_A 254 ----RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292 (351)
T ss_dssp ----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred ----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence 011245788999999999999999999999999999953
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.2e-29 Score=245.98 Aligned_cols=282 Identities=17% Similarity=0.152 Sum_probs=162.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++......... ..+++ +..+....|+|++.+++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~--~~~~E----~~~l~~l~hp~iv~~~~-------------- 70 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPS--TAIRE----ISLMKELKHENIVRLYD-------------- 70 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTCSCH--HHHHH----HHHHTTCCBTTBCCEEE--------------
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHH--HHHHH----HHHHHhcCCCCcceEEE--------------
Confidence 67999999999999998899999999987542110000 00000 00111112333332221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-----CCC--HHHHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-----GLK--VLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-----~~~--~~~~~~~~i~~~l~~lh~ 286 (487)
+....+..++||||++| +|.++...... +.+ ....+..++..+|.|||+
T Consensus 71 -----------------------~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~ 126 (317)
T 2pmi_A 71 -----------------------VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126 (317)
T ss_dssp -----------------------EECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------EEEECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 12223567899999996 77776544331 233 344556788899999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++||||||+|||++.+|.+||+|||++..+...... ......+..+..||.+. .....++++|+||+|+.+++
T Consensus 127 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~e 201 (317)
T 2pmi_A 127 NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT-FSSEVVTLWYRAPDVLM----GSRTYSTSIDIWSCGCILAE 201 (317)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC-CCCCCSCCTTCCHHHHT----TCCCCCTHHHHHHHHHHHHH
T ss_pred CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCccc-CCCCcccccccCchHhh----CCCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999765321100 00001122233444331 12345788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCCh--HHhHhHHHHHHhccCCCH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV--LAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~--~~~~~p~~~~~l~~~~~p 444 (487)
++++. .++...+.......+...+...+...-+... . ....+|.+.. .......+........++
T Consensus 202 l~~g~--~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (317)
T 2pmi_A 202 MITGK--PLFPGTNDEEQLKLIFDIMGTPNESLWPSVT----K-------LPKYNPNIQQRPPRDLRQVLQPHTKEPLDG 268 (317)
T ss_dssp HHHSS--CSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG----G-------CTTCCTTCCCCCCCCSHHHHGGGCSSCCCH
T ss_pred HHhCC--CCCCCCChHHHHHHHHHHhCCCChhHhhhhh----h-------hhhcccccccccchhHHHhhcccccccCCH
Confidence 99853 4555555444444444333221111111100 0 0011111100 000011111122235688
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDFEF 477 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~ 477 (487)
++++.+.+||..||..|++..+.+.|+||.--+
T Consensus 269 ~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 301 (317)
T 2pmi_A 269 NLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY 301 (317)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred HHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence 999999999999999999999999999996543
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-28 Score=246.10 Aligned_cols=251 Identities=14% Similarity=0.109 Sum_probs=154.2
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|... +.||+|+||.||+|+++.+|+.||||++..+.... +.
T Consensus 22 y~~~--~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------~~--- 62 (361)
T 3uc3_A 22 YDFV--KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----------------------------------EN--- 62 (361)
T ss_dssp EEEE--EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC----------------------------------HH---
T ss_pred EEEE--EEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc----------------------------------HH---
Confidence 4444 78999999999999999899999999987542110 00
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
+.+|...+.++ .++++.-..-+....+..++||||++|++|.+..... .........+..++..+|.|||+
T Consensus 63 ---~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~ 134 (361)
T 3uc3_A 63 ---VQREIINHRSL-----RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134 (361)
T ss_dssp ---HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhC-----CCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11122222221 1222211111122345678999999999998775332 12233445566888899999999
Q ss_pred CCccccCCCCCCeEEcCCCc--EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGK--LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~--i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
.|++|||+||+||+++.++. ++|+|||+++....... ......+..+..||.+. ...+.+..+|+||+|+.+
T Consensus 135 ~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~----~~~~~~~~~DiwslG~il 208 (361)
T 3uc3_A 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLL----RQEYDGKIADVWSCGVTL 208 (361)
T ss_dssp TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------------CTTSCHHHHH----CSSCCHHHHHHHHHHHHH
T ss_pred CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC--CCCCcCCCCcCChhhhc----CCCCCCCeeeeehhHHHH
Confidence 99999999999999987765 99999999975433221 11222334455555442 122223347999999999
Q ss_pred HHHHHHhccCCCCcCc----HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 365 RNFFDDALNSSVSELN----FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
++++++. .|+...+ +...+..+ .......|+ ..
T Consensus 209 ~ell~g~--~Pf~~~~~~~~~~~~~~~~----~~~~~~~~~-------------------------------------~~ 245 (361)
T 3uc3_A 209 YVMLVGA--YPFEDPEEPRDYRKTIQRI----LSVKYSIPD-------------------------------------DI 245 (361)
T ss_dssp HHHHHSS--CSCC----CCCHHHHHHHH----HTTCCCCCT-------------------------------------TS
T ss_pred HHHHhCC--CCCCCCccHHHHHHHHHHH----hcCCCCCCC-------------------------------------cC
Confidence 9999843 2332211 11111111 000111110 01
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
..++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 246 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 279 (361)
T 3uc3_A 246 RISPECCHLISRIFVADPATRISIPEIKTHSWFL 279 (361)
T ss_dssp CCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHhCcchh
Confidence 3468889999999999999999999999999993
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-28 Score=244.09 Aligned_cols=289 Identities=16% Similarity=0.121 Sum_probs=172.0
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|... +.||+|+||.||+|++..+|+.||||+++...... ..
T Consensus 35 ~~y~~~--~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------~~- 77 (360)
T 3llt_A 35 NAFLVI--RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT----------------------------------RS- 77 (360)
T ss_dssp TTEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHH----------------------------------HH-
T ss_pred CEEEEE--EEEcccCCeEEEEEEECCCCeEEEEEEeccchhhh----------------------------------hh-
Confidence 344444 78999999999999998899999999987431110 00
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhc-CCCH--HHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKV--LDLVNTGIQCS 280 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~--~~~~~~~i~~~ 280 (487)
+..|...+.++...-..+++ +.+++ .......++||||+ |++|.++...... +.+. ...+..++..|
T Consensus 78 -----~~~e~~~l~~l~~~~~~h~~--iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~a 149 (360)
T 3llt_A 78 -----AKIEADILKKIQNDDINNNN--IVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKA 149 (360)
T ss_dssp -----HHHHHHHHHHTCCCSTTGGG--BCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred -----hHHHHHHHHHhcccCCCCCC--eecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 11112222221110001111 22222 22345678999999 8899887554331 2443 44556788899
Q ss_pred HHHHHHCCccccCCCCCCeEEcC-------------------------CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHh
Q 011399 281 LRQLLEYGYFHADPHPGNLLATP-------------------------EGKLAFLDFGMMSETPEEARFAIIGHVVHMVN 335 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~-------------------------~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~ 335 (487)
|.|||+.|++||||||+|||++. ++.++|+|||++........ ...+ +..+
T Consensus 150 L~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-~~~g---t~~y 225 (360)
T 3llt_A 150 LNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG-SIIN---TRQY 225 (360)
T ss_dssp HHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC-SCCS---CGGG
T ss_pred HHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCc-CccC---cccc
Confidence 99999999999999999999975 78999999999976543211 0111 2233
Q ss_pred cCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHH
Q 011399 336 RDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEG 415 (487)
Q Consensus 336 ~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg 415 (487)
..|| ...-+-.++++|+||+|+.+++++++. .++...+.......+... ....|+.+............
T Consensus 226 ~aPE-----~~~~~~~~~~~DiwslG~il~ell~g~--~pf~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~ 294 (360)
T 3llt_A 226 RAPE-----VILNLGWDVSSDMWSFGCVLAELYTGS--LLFRTHEHMEHLAMMESI----IQPIPKNMLYEATKTNGSKY 294 (360)
T ss_dssp CCHH-----HHTTCCCCTTHHHHHHHHHHHHHHHSS--CSCCCSSHHHHHHHHHHH----TCCCCHHHHHHHTTSGGGGG
T ss_pred cCcH-----HHcCCCCCCccchHHHHHHHHHHHHCC--CCCCCCcHHHHHHHHHHh----cCCCCHHHHhhhhhccCccc
Confidence 3444 444445688999999999999999853 455555544444333332 23444443211110000000
Q ss_pred h----hhhhCCCCChHHhHhHHHHHH---hccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 416 L----ALYADPNFKVLAASYPYFAKR---LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 416 ~----~~~ldP~~~~~~~~~p~~~~~---l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
. .....|...........+... .....++.+++.+.+||..||..|++..+.+.|+||+
T Consensus 295 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 295 VNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp EETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred cCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 0 000001111000111111110 0123468899999999999999999999999999995
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-27 Score=235.16 Aligned_cols=278 Identities=15% Similarity=0.149 Sum_probs=170.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+......... ..+. +.+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~~~~------~~~ 51 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPV-------------------------------IKKI------ALR 51 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HH-------------------------------HHHH------HHH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchH-------------------------------HHHH------HHH
Confidence 679999999999999998899999998865422110 0011 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
|++.+.++. +++ +++++ ....+..++||||++|++|.++... ..+.+ ....+..++..++.|+|+.|+
T Consensus 52 E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~i 123 (311)
T 4agu_A 52 EIRMLKQLK-----HPN--LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCHKHNC 123 (311)
T ss_dssp HHHHHHHCC-----CTT--BCCEEEEEEETTEEEEEEECCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhCC-----CCC--ccchhheeecCCeEEEEEEeCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 233222221 222 22222 2234567899999999988776332 22233 344556788889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++..+...... ......+..+..||.+. .....++++|+||+|+.++++++
T Consensus 124 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~Di~slG~il~~l~~ 198 (311)
T 4agu_A 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY-YDDEVATRWYRSPELLV----GDTQYGPPVDVWAIGCVFAELLS 198 (311)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECC-------------GGGCCHHHHH----TCSCCCTHHHHHHHHHHHHHHHH
T ss_pred cCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc-cCCCcCCccccChHHHh----cCCCCCcchhhHHHHHHHHHHHh
Confidence 99999999999999999999999999887643221 12222344455666542 22445788999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+ ..++...+.......+..... ..++.............+ ...|..... .+. .......++.+++.
T Consensus 199 g--~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~--~~~~~~~~~~~~~l 264 (311)
T 4agu_A 199 G--VPLWPGKSDVDQLYLIRKTLG----DLIPRHQQVFSTNQYFSG---VKIPDPEDM---EPL--ELKFPNISYPALGL 264 (311)
T ss_dssp S--SCSCCCSSHHHHHHHHHHHHC----SCCHHHHHHHHTCGGGTT---CCCCCCSSC---CCH--HHHCTTCCHHHHHH
T ss_pred C--CCCCCCCCHHHHHHHHHHHhc----cccccccccccccccccc---CcCCCcccc---chh--hhhcccccHHHHHH
Confidence 5 345555554444433333222 122222111110000000 001111100 111 11223578899999
Q ss_pred HHHHHhhcCcccccccchhhcccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+||..||..|++..+.+.|+||.-
T Consensus 265 i~~~L~~dP~~Rpt~~ell~hp~f~~ 290 (311)
T 4agu_A 265 LKGCLHMDPTERLTCEQLLHHPYFEN 290 (311)
T ss_dssp HHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred HHHHccCChhhcCCHHHHhcChHHHh
Confidence 99999999999999999999999964
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-27 Score=244.80 Aligned_cols=210 Identities=15% Similarity=0.138 Sum_probs=135.5
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.. +.||+|+||+||+|+++.+|+.||||++++..... . ..
T Consensus 63 f~~~--~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~--~----------------------------------~~ 104 (412)
T 2vd5_A 63 FEIL--KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK--R----------------------------------GE 104 (412)
T ss_dssp EEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--H----------------------------------GG
T ss_pred EEEE--EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--H----------------------------------HH
Confidence 4444 78999999999999999899999999986321000 0 00
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh 285 (487)
.-.+..|...+.++ +++.+.-..-+.......+|||||++|++|.++........+ ....+..++..||.|||
T Consensus 105 ~~~~~~E~~il~~~-----~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH 179 (412)
T 2vd5_A 105 VSCFREERDVLVNG-----DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179 (412)
T ss_dssp GCCHHHHHHHHHHS-----CTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00122233222221 233322222223334567999999999999988654333344 44556778889999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH---HHHHHHHHHHHhcCHHHHHHHHHH--cCCCCCCCCcchH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR---FAIIGHVVHMVNRDYEAMARDYYA--LDFLSPDVDVTPI 360 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~Di~sl 360 (487)
+.||+||||||+|||++.+|.+||+|||+++.+..... ...++ +..+..||.+...-.. .+..+.++|+||+
T Consensus 180 ~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~G---t~~Y~APE~l~~~~~~~~~~~~~~~~DiwSl 256 (412)
T 2vd5_A 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVG---TPDYLSPEILQAVGGGPGTGSYGPECDWWAL 256 (412)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCS---CGGGCCHHHHHHHHTCTTCSEECTHHHHHHH
T ss_pred HCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceecc---ccCcCCHHHHhhcccCcCCCCCChHHhhhHH
Confidence 99999999999999999999999999999987654311 00111 2233444443221000 2345788999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHH
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIV 385 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (487)
|+.+++++++. .|+...+.....
T Consensus 257 GvilyelltG~--~Pf~~~~~~~~~ 279 (412)
T 2vd5_A 257 GVFAYEMFYGQ--TPFYADSTAETY 279 (412)
T ss_dssp HHHHHHHHHSS--CTTCCSSHHHHH
T ss_pred hHHHHHHHhCC--CCCCCCCHHHHH
Confidence 99999999743 455554444333
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-28 Score=247.73 Aligned_cols=259 Identities=15% Similarity=0.169 Sum_probs=166.7
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|... +.||+|+||.||+|.++.+|+.||||+++...... .+.
T Consensus 26 ~~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~----------------------------- 72 (362)
T 2bdw_A 26 KFSDNYDVK--EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDF----------------------------- 72 (362)
T ss_dssp HHHHHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCH--HHH-----------------------------
T ss_pred CcccCeEEe--eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCH--HHH-----------------------------
Confidence 345556655 77999999999999999899999999997542110 010
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCS 280 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~ 280 (487)
+. +.+|+..+.++ +++++.-..-+....+..++||||++|++|.+.... ....+ ....+..++..+
T Consensus 73 ~~------~~~E~~il~~l-----~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~a 140 (362)
T 2bdw_A 73 QK------LEREARICRKL-----QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILES 140 (362)
T ss_dssp HH------HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT-CSCCCHHHHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHhC-----CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 01 12222222222 122221111122334567899999999999766332 12233 334556788889
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCC---cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEG---KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g---~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
+.|||+.|++||||||+|||++.++ .++|+|||++..+...... .. ..+++..++++....+..++++|+
T Consensus 141 l~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~--~~-----~~gt~~y~aPE~~~~~~~~~~~Di 213 (362)
T 2bdw_A 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HG-----FAGTPGYLSPEVLKKDPYSKPVDI 213 (362)
T ss_dssp HHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC--CC-----SCSCTTTCCHHHHTTCCCCTHHHH
T ss_pred HHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc--cc-----CCCCccccCHHHHccCCCCchhhH
Confidence 9999999999999999999998654 5999999999877543210 00 112233344444444456788999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++++. .|+...+...+...+.. .....|. |
T Consensus 214 wslG~il~~ll~g~--~Pf~~~~~~~~~~~i~~----~~~~~~~--------------------~--------------- 252 (362)
T 2bdw_A 214 WACGVILYILLVGY--PPFWDEDQHRLYAQIKA----GAYDYPS--------------------P--------------- 252 (362)
T ss_dssp HHHHHHHHHHHHSS--CSSCCSSHHHHHHHHHH----TCCCCCT--------------------T---------------
T ss_pred HHHHHHHHHHHHCC--CCCCCCCHHHHHHHHHh----CCCCCCc--------------------c---------------
Confidence 99999999999854 34444443332222211 0111110 0
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.....++++++.+.+||..||..|++..+.+.|+||.
T Consensus 253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 289 (362)
T 2bdw_A 253 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 289 (362)
T ss_dssp GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence 0123468889999999999999999999999999995
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.6e-28 Score=238.74 Aligned_cols=254 Identities=15% Similarity=0.125 Sum_probs=158.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||+++...... -.....+......+....|+|++
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv------------------ 75 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD----PSFYLRFRREAQNAAALNHPAIV------------------ 75 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS----HHHHHHHHHHHTTCCCCCCTTBC------------------
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCC----HHHHHHHHHHHHHHHcCCCCCcc------------------
Confidence 78999999999999998899999999997642221 01111111111122222233322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC--CC----CceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY--TS----GKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLL 285 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~--~~----~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh 285 (487)
+++... .. ..++||||++|++|.++.... ...+. ...+..++..+|.|+|
T Consensus 76 ---------------------~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH 133 (311)
T 3ork_A 76 ---------------------AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 133 (311)
T ss_dssp ---------------------CEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------eEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 222211 11 238999999999999875433 23343 3445577888999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
+.|++|+|+||+||+++.+|.++|+|||++..+......... .....+++..++++.+..+..++++|+||+|+.++
T Consensus 134 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~ 210 (311)
T 3ork_A 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210 (311)
T ss_dssp HTTCCCCCCCGGGEEEETTSCEEECCCSCC---------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred HCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccccccccc---ccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHH
Confidence 999999999999999999999999999999877544221100 01111223333334444555677899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++. .++...+......... .. ...|+ .......+++
T Consensus 211 ~ll~g~--~pf~~~~~~~~~~~~~---~~--~~~~~----------------------------------~~~~~~~~~~ 249 (311)
T 3ork_A 211 EVLTGE--PPFTGDSPVSVAYQHV---RE--DPIPP----------------------------------SARHEGLSAD 249 (311)
T ss_dssp HHHHSS--CSCCCSSHHHHHHHHH---HC--CCCCH----------------------------------HHHSTTCCHH
T ss_pred HHHhCC--CCCCCCChHHHHHHHh---cC--CCCCc----------------------------------ccccCCCCHH
Confidence 999843 4554444332221111 00 00010 1112346788
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+++.+.+||.+||..|++..+.+.+.|+..
T Consensus 250 l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 250 LDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 899999999999999999999999999854
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-27 Score=234.99 Aligned_cols=272 Identities=14% Similarity=0.138 Sum_probs=167.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||++++...+.+..++.+++.+. .|++++.
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~---------~~~~i~~----------------- 95 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR---------GGPNIIT----------------- 95 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHT---------TSTTBCC-----------------
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcC---------CCCCEEE-----------------
Confidence 78999999999999998899999999998665444333333322221 0222111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+-.++.+ .....++||||++|++|.++. ..........+..++..++.|||+.|++||
T Consensus 96 -------------------~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 154 (330)
T 3nsz_A 96 -------------------LADIVKDPVSRTPALVFEHVNNTDFKQLY--QTLTDYDIRFYMYEILKALDYCHSMGIMHR 154 (330)
T ss_dssp -------------------EEEEEECTTTCCEEEEEECCCCCCHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred -------------------eeeeeccCCCCceEEEEeccCchhHHHHH--HhCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 1112221 134568999999999987763 334444455667888899999999999999
Q ss_pred CCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 293 DPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 293 Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||||+|||++.++ .++|+|||++..+...... .....+..+..||.+. ..+..+.++|+||+|+.+++++++.
T Consensus 155 Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~il~~ll~g~ 228 (330)
T 3nsz_A 155 DVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY--NVRVASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRK 228 (330)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCEECCTTCCC--CSCCSCGGGCCHHHHT----TCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc--ccccccccccChhhhc----CCCcCCchhhHHHHHHHHHHHHhCC
Confidence 9999999999777 8999999999866433110 0001112233444331 2245678899999999999999854
Q ss_pred ccCCCCcCcHHHHHHHHHH---------HHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 372 LNSSVSELNFKTIVDGLGA---------VLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~---------~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+.. ...+....+..+.. .+.......++.+..... . .+... +.. +.........
T Consensus 229 ~p~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~-~~~---~~~~~~~~~~ 292 (330)
T 3nsz_A 229 EPFF-HGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG---------R--HSRKR-WER---FVHSENQHLV 292 (330)
T ss_dssp SSSS-CCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHC---------C--CCCCC-GGG---GCCTTTGGGC
T ss_pred CCcc-cCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhh---------h--ccccc-hhh---hccccccccC
Confidence 3221 11222222222211 111222222322211100 0 00000 000 0000011125
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
++++++.+.+||..||..|++..+.+.|+||.
T Consensus 293 ~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~ 324 (330)
T 3nsz_A 293 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324 (330)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGT
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcCccHh
Confidence 78999999999999999999999999999996
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9e-29 Score=250.96 Aligned_cols=250 Identities=17% Similarity=0.139 Sum_probs=155.6
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|... +.||+|+||+||+|+++.+|+.||||+++............++++... .+...
T Consensus 40 y~~~--~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~---ll~~~------------------ 96 (373)
T 2r5t_A 40 FHFL--KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV---LLKNV------------------ 96 (373)
T ss_dssp EEEE--EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------C---CBCCC------------------
T ss_pred eEEE--EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHH---HHHhC------------------
Confidence 4444 789999999999999998999999999974321100000000000000 00011
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~l 284 (487)
.++. +.+++ .......|+||||++|++|.+...... ........+..++..+|.||
T Consensus 97 -------------------~hp~--Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~L 155 (373)
T 2r5t_A 97 -------------------KHPF--LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYL 155 (373)
T ss_dssp -------------------CCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCCC--CCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1222 22222 233456799999999999987754321 22334455678888999999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
|++||+||||||+|||++.+|.++|+|||+++..... ....+ .+.+..+++++......+.++|+||+|+
T Consensus 156 H~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~--------~gt~~y~aPE~~~~~~~~~~~DiwslG~ 227 (373)
T 2r5t_A 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF--------CGTPEYLAPEVLHKQPYDRTVDWWCLGA 227 (373)
T ss_dssp HHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSB--------SCCCCCCCHHHHTTCCCCTHHHHHHHHH
T ss_pred HHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccc--------cCCccccCHHHhCCCCCCchhhhHHHHH
Confidence 9999999999999999999999999999998753211 00111 1223334444444445578899999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+++++++. .|+...+...+...+.. .....| ...
T Consensus 228 il~ell~G~--~Pf~~~~~~~~~~~i~~----~~~~~~---------------------------------------~~~ 262 (373)
T 2r5t_A 228 VLYEMLYGL--PPFYSRNTAEMYDNILN----KPLQLK---------------------------------------PNI 262 (373)
T ss_dssp HHHHHHHSS--CTTCCSBHHHHHHHHHH----SCCCCC---------------------------------------SSS
T ss_pred HHHHHHcCC--CCCCCCCHHHHHHHHHh----cccCCC---------------------------------------CCC
Confidence 999999743 45544444333322211 011111 124
Q ss_pred CHHHHHHHHHHHhhcCccccccc----chhhccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLY----SPFTINLVD 474 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~----~~~~~~~~~ 474 (487)
++.+++.+.+||.+||.+|++.. +...|+||.
T Consensus 263 ~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~ 298 (373)
T 2r5t_A 263 TNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFS 298 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGT
T ss_pred CHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcccc
Confidence 56677788888888888888763 556777773
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-27 Score=237.75 Aligned_cols=257 Identities=16% Similarity=0.108 Sum_probs=158.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++...... ..+. +.+.+
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~~~~------ 58 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND-DEDI-----------------------------DWVQT------ 58 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS-HHHH-----------------------------HHHHH------
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc-hHHH-----------------------------HHHHH------
Confidence 78999999999999999899999999997432110 0000 11111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.+ ..+++.+.-..-+....+..++||||++|++|.+..... .........+..++..+|.|||+.|++||
T Consensus 59 E~~~l~~----~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHr 134 (345)
T 3a8x_A 59 EKHVFEQ----ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 134 (345)
T ss_dssp HHHHHHH----TTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHHh----cCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 1111111 122333222122223346679999999999998775432 22233455666888899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||+|||++.+|.++|+|||+++..... ..... .+++..+++++......+.++|+||+|+.+++++++
T Consensus 135 Dlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~--------~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g 206 (345)
T 3a8x_A 135 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF--------CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206 (345)
T ss_dssp CCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCC--------CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEECCCCCEEEEeccccccccCCCCccccc--------CCCccccCccccCCCCCChHHhHHHHHHHHHHHHhC
Confidence 99999999999999999999999864221 11111 122333344444444457889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+......... ..... ..+.+.. ....+.+ ....++.+++.+
T Consensus 207 ~--~pf~~~~~~~~~-----------~~~~~--~~~~~~i-------~~~~~~~--------------p~~~s~~~~~li 250 (345)
T 3a8x_A 207 R--SPFDIVGSSDNP-----------DQNTE--DYLFQVI-------LEKQIRI--------------PRSLSVKAASVL 250 (345)
T ss_dssp S--CTTTTTTC------------------CH--HHHHHHH-------HHCCCCC--------------CTTSCHHHHHHH
T ss_pred C--CCcCCccccccc-----------ccccH--HHHHHHH-------HcCCCCC--------------CCCCCHHHHHHH
Confidence 3 233221100000 00000 0000000 0000111 123578889999
Q ss_pred HHHHhhcCcccccc------cchhhccccc
Q 011399 451 VELLFKDGRFRHVL------YSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~------~~~~~~~~~~ 474 (487)
.+||.+||..|++. .+...|+||.
T Consensus 251 ~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~ 280 (345)
T 3a8x_A 251 KSFLNKDPKERLGCHPQTGFADIQGHPFFR 280 (345)
T ss_dssp HHHTCSSTTTSTTCCTTTHHHHHHTSGGGT
T ss_pred HHHhcCCHhHCCCCCCcCCHHHHhcCCccC
Confidence 99999999999986 4778899994
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-29 Score=243.18 Aligned_cols=275 Identities=15% Similarity=0.109 Sum_probs=164.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++......- .... +.+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~~~~------~~~ 50 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-------------------------------VPSS------ALR 50 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTT-------------------------------HHHH------HHH
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCC-------------------------------cchH------HHH
Confidence 679999999999999998999999999874421110 0000 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++ .+++ +.+++ ....+..++||||++|+.+..+ .......+. ...+..++..++.|+|+.|+
T Consensus 51 E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i 122 (292)
T 3o0g_A 51 EICLLKEL-----KHKN--IVRLHDVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122 (292)
T ss_dssp HHHHHTTC-----CCTT--BCCEEEEEEETTEEEEEEECCSEEHHHHH-HHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHhcC-----CCCC--EeeEEeEEEeCCEEEEEEecCCCCHHHHH-HhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 22222111 1222 12222 2234567899999987444333 222233333 44556788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+||+||+++.+|.++|+|||++..+...... ......+..+..||.+. .....+.++|+||+|+.++++++
T Consensus 123 vH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~~l~~ 197 (292)
T 3o0g_A 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC-YSAEVVTLWYRPPDVLF----GAKLYSTSIDMWSAGCIFAELAN 197 (292)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC-CCSCCSCGGGCCHHHHT----TCSCCCTHHHHHHHHHHHHHHTT
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccceecCCcccc-ccCCccccCCcChHHHc----CCCCcCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999765422110 00001122334444431 12335788999999999999996
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHh--HhHHHHHHhccCCCHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA--SYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~--~~p~~~~~l~~~~~p~~r 447 (487)
...+ .+...+....+..+...........-+.+. -.|++..... .... ........++.++
T Consensus 198 ~~~p-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 260 (292)
T 3o0g_A 198 AGRP-LFPGNDVDDQLKRIFRLLGTPTEEQWPSMT---------------KLPDYKPYPMYPATTS-LVNVVPKLNATGR 260 (292)
T ss_dssp TSCC-SCCCSSHHHHHHHHHHHHCCCCTTTCTTGG---------------GSTTCCCCCCCCTTCC-CTTTSTTCCHHHH
T ss_pred cCCC-CcCCCCHHHHHHHHHHHhCCCChhhhhhhc---------------ccccccccccccCCcc-hhhcccccChHHH
Confidence 4322 234444444444444333221111000000 0011100000 0000 0111234688999
Q ss_pred HHHHHHHhhcCcccccccchhhcccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+.+||..||..|++..+.+.|+||.-
T Consensus 261 ~li~~~L~~dP~~R~t~~e~l~hp~f~~ 288 (292)
T 3o0g_A 261 DLLQNLLKCNPVQRISAEEALQHPYFSD 288 (292)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHHHHHhccChhhCCCHHHHhcCccccc
Confidence 9999999999999999999999999963
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-27 Score=246.25 Aligned_cols=285 Identities=16% Similarity=0.122 Sum_probs=161.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++....... +. +. +.+
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~--~~-----------------------------~~------~~~ 74 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI--DC-----------------------------KR------ILR 74 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHH--HH-----------------------------HH------HHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChH--HH-----------------------------HH------HHH
Confidence 789999999999999998999999999975422211 00 11 122
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecCC----CCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDYT----SGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~----~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
|.+.+.++. +++ +.+-.++.... ...|+||||++| +|.++..... ........+..++..||.|||+.
T Consensus 75 E~~~l~~l~-----h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~ 148 (432)
T 3n9x_A 75 EITILNRLK-----SDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES 148 (432)
T ss_dssp HHHHHHHCC-----CTTBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC-----CCCcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222222221 111 11111111111 457999999976 7766632211 22334456678889999999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH---------------------HHHHHHHHHhcCHHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA---------------------IIGHVVHMVNRDYEAMARDYY 346 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 346 (487)
|++||||||+|||++.+|.+||+|||+++.+....... +.....+..+..||.+ .
T Consensus 149 givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~----~ 224 (432)
T 3n9x_A 149 GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI----L 224 (432)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHH----T
T ss_pred CCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHH----h
Confidence 99999999999999999999999999999875542211 1111112234444432 1
Q ss_pred HcCCCCCCCCcchHHHHHHHHHHHhc--------cCC-CCcCc--------------HHHHHHHHHHHHhhCCCCCChHH
Q 011399 347 ALDFLSPDVDVTPIVPALRNFFDDAL--------NSS-VSELN--------------FKTIVDGLGAVLYQYPFNVPAYY 403 (487)
Q Consensus 347 ~~g~~~~~~Di~sl~~~l~~~~~~~~--------~~~-~~~~~--------------~~~~~~~l~~~~~~~~~~~p~~~ 403 (487)
..+..+.++|+||+||.+++++++.. ..+ +.+.+ .......+..+.... +.|+.-
T Consensus 225 ~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~--g~p~~~ 302 (432)
T 3n9x_A 225 LQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNII--GTPTED 302 (432)
T ss_dssp TCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHH--CSCCHH
T ss_pred cCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhc--CCCCHH
Confidence 33446788999999999999996211 111 11100 011111221111111 122210
Q ss_pred -HHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 404 -ALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 404 -~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
..-+..- ........+ |.... .+ ........++++++.+.+||..||.+|++..+.+.|+||.-
T Consensus 303 ~~~~~~~~-~~~~~~~~~-~~~~~----~~--~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~ 367 (432)
T 3n9x_A 303 DLKNINKP-EVIKYIKLF-PHRKP----IN--LKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367 (432)
T ss_dssp HHHTCCCH-HHHHHHHTS-CCCCC----CC--HHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTT
T ss_pred HHHhccCH-HHHHHHHhC-CCCCC----CC--HHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhh
Confidence 0000000 000000001 10000 00 11222357899999999999999999999999999999953
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-28 Score=245.08 Aligned_cols=263 Identities=13% Similarity=0.097 Sum_probs=159.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+++...... ..+...++.....+..+.. .|++++.++..
T Consensus 68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~------------- 132 (371)
T 3q60_A 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS-RSELERLHEATFAAARLLG-ESPEEARDRRR------------- 132 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH-HHHHHHHHHHHHHHHHHHC-----------C-------------
T ss_pred eeccCCCCEEEEEEEECCCCceeEEEEEEeccccc-ccHHHHHHHHHHHHHHhcc-cChhhhhhcee-------------
Confidence 78999999999999998899999999998653211 1112222222111222222 34444433221
Q ss_pred HHHHHHHHHHHhCCCCCeEec-eeeecC----------------CCCceEEEeecCCCCcCcHHHHHhc--CCCHH----
Q 011399 214 EGQNARRFKKLYADKEDVLVP-DIFWDY----------------TSGKVLTMEWVEGVKLNEQVAIESQ--GLKVL---- 270 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP-~v~~~~----------------~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~~---- 270 (487)
+.+| .++..- ....+|||||++ ++|.++...... .....
T Consensus 133 -----------------~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~ 194 (371)
T 3q60_A 133 -----------------LLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGIL 194 (371)
T ss_dssp -----------------BCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHH
T ss_pred -----------------EEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhh
Confidence 1111 111100 033689999999 699887654322 22333
Q ss_pred --HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc
Q 011399 271 --DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL 348 (487)
Q Consensus 271 --~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (487)
..+..++..||.|||++||+||||||+|||++.+|.+||+|||+++........ ...+..+..||.+ ..
T Consensus 195 vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~----~~~t~~y~aPE~~-----~~ 265 (371)
T 3q60_A 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPA----SSVPVTYAPREFL-----NA 265 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEG----GGSCGGGCCHHHH-----TC
T ss_pred hHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCccC----ccCCcCCcChhhc-----cC
Confidence 344588999999999999999999999999999999999999999877543211 1112344455543 32
Q ss_pred --CCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCCh
Q 011399 349 --DFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (487)
Q Consensus 349 --g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (487)
...++++|+||+|+.+++++++. .|+....... .. ....... .......+..
T Consensus 266 ~~~~~~~~~DiwSlG~il~elltg~--~Pf~~~~~~~---------~~-~~~~~~~--------------~~~~~~~~~~ 319 (371)
T 3q60_A 266 STATFTHALNAWQLGLSIYRVWCLF--LPFGLVTPGI---------KG-SWKRPSL--------------RVPGTDSLAF 319 (371)
T ss_dssp SEEECCHHHHHHHHHHHHHHHHHSS--CSTTBCCTTC---------TT-CCCBCCT--------------TSCCCCSCCC
T ss_pred CCCCcCccccHHHHHHHHHHHHhCC--CCCCCcCccc---------cc-chhhhhh--------------hhccccccch
Confidence 34577899999999999999843 3333221000 00 0000000 0000000000
Q ss_pred HHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 427 LAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 427 ~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
| .....++.+++.+.+||..||+.|++..+.+.|+||.
T Consensus 320 -----~-----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~ 357 (371)
T 3q60_A 320 -----G-----SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL 357 (371)
T ss_dssp -----T-----TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred -----h-----hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence 0 0124578999999999999999999999999999995
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-28 Score=237.14 Aligned_cols=276 Identities=19% Similarity=0.175 Sum_probs=166.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++. +|+.||||+++......- ....+.+....+....|+|++.+++
T Consensus 8 ~~lg~G~~g~V~~~~~~-~~~~~aiK~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~-------------- 67 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEG-----IPSTTIREISILKELKHSNIVKLYD-------------- 67 (288)
T ss_dssp EEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGC-----CCHHHHHHHHGGGGCCCTTBCCEEE--------------
T ss_pred hhcccCCCEEEEEEEcC-CCCEEEEEEEeccccccc-----cchhHHHHHHHHHhcCCCCEeeeee--------------
Confidence 67999999999999995 899999999865422110 0000000111111112333222211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
+....+..++||||++| +|.+.......+.+. ...+..++..+|.|+|+.|++|
T Consensus 68 -----------------------~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 123 (288)
T 1ob3_A 68 -----------------------VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123 (288)
T ss_dssp -----------------------EEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred -----------------------EEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 12234567999999987 666654332233443 3445678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+||+++.+|.++|+|||++..+...... ......+..+..||.+. .....++++|+||+|+.+++++++.
T Consensus 124 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~~l~~g~ 198 (288)
T 1ob3_A 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRK-YTHEIVTLWYRAPDVLM----GSKKYSTTIDIWSVGCIFAEMVNGT 198 (288)
T ss_dssp SCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHHT----TCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCCCHHHEEEcCCCCEEEeECccccccCccccc-cccccccccccCchhee----CCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998654322111 11111223344454431 1234578899999999999999853
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+.......+...........-+... .....+|.+..... .| ........++.+++.+.
T Consensus 199 --~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~li~ 262 (288)
T 1ob3_A 199 --PLFPGVSEADQLMRIFRILGTPNSKNWPNVT-----------ELPKYDPNFTVYEP-LP--WESFLKGLDESGIDLLS 262 (288)
T ss_dssp --CSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG-----------GSTTCCTTCCCCCC-CC--GGGTCCSCCHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHHHCCCChhhchhhh-----------cccccccccccccC-cc--HHHHhhhcCHHHHHHHH
Confidence 4555555444444443332221111101100 00112333322111 01 12233457889999999
Q ss_pred HHHhhcCcccccccchhhccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+||..||+.|++..+.+.|+||.
T Consensus 263 ~~L~~dP~~Rpt~~e~l~hp~f~ 285 (288)
T 1ob3_A 263 KMLKLDPNQRITAKQALEHAYFK 285 (288)
T ss_dssp HHTCSSTTTSCCHHHHHTSGGGG
T ss_pred HHcCCCcccCCCHHHHhcCcchh
Confidence 99999999999999999999996
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-28 Score=240.41 Aligned_cols=274 Identities=16% Similarity=0.107 Sum_probs=157.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||++++.....-. . .-+... ..............-...-.+.+
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~-~--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 85 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQA-G--FPRRPP----------PRGTRPAPGGCIQPRGPIEQVYQ 85 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC--------------------------------------------CHHHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhc-c--cccccc----------cccccccccccccccchHHHHHH
Confidence 7899999999999999889999999999765321100 0 000000 00000000000000000112344
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|+..+.++ .+++ +.+-.++.+ .....++||||++|++|.++.............+..++..+|.|||+.|++|
T Consensus 86 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 160 (298)
T 2zv2_A 86 EIAILKKL-----DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIH 160 (298)
T ss_dssp HHHHHHTC-----CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHhC-----CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 44444433 1232 222222222 1345799999999999988633222223334455678888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcchHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD---FLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~Di~sl~~~l~~~~ 368 (487)
||+||+||+++.+|.++|+|||++..+...... ......+..+..||. ...+ +.++++|+||+|+.+++++
T Consensus 161 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~-----~~~~~~~~~~~~~Di~slG~~l~~l~ 234 (298)
T 2zv2_A 161 RDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPES-----LSETRKIFSGKALDVWAMGVTLYCFV 234 (298)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGG-----CCTTCCCEESHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhh-----hccCCCCCCCchhhhHhHHHHHHHHH
Confidence 999999999999999999999999876432100 000011122233332 2111 1244579999999999998
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
++. .|+...+...+...+. ...... |. ....++.+++
T Consensus 235 ~g~--~pf~~~~~~~~~~~~~----~~~~~~----------------------~~---------------~~~~~~~l~~ 271 (298)
T 2zv2_A 235 FGQ--CPFMDERIMCLHSKIK----SQALEF----------------------PD---------------QPDIAEDLKD 271 (298)
T ss_dssp HSS--CSSCCSSHHHHHHHHH----HCCCCC----------------------CS---------------SSCCCHHHHH
T ss_pred HCC--CCCCCccHHHHHHHHh----cccCCC----------------------CC---------------ccccCHHHHH
Confidence 743 3444333222111110 000000 10 1235678899
Q ss_pred HHHHHHhhcCcccccccchhhccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+.+||..||+.|++..+.+.|+||.
T Consensus 272 li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 272 LITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHhhcChhhCCCHHHHhcCcccc
Confidence 99999999999999999999999984
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-28 Score=248.37 Aligned_cols=245 Identities=16% Similarity=0.153 Sum_probs=154.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||++....... .... .. +.+
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~----------------------~~~~--------~~------~~~ 64 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE----------------------RNEV--------RN------VFK 64 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH----------------------TTCH--------HH------HHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc----------------------HHHH--------HH------HHH
Confidence 78999999999999999899999999986321100 0000 01 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|.+.+.++ .++. +..++ .......++||||++|++|.++.... .........+..++..||.|||+.||+
T Consensus 65 E~~il~~l-----~hp~--Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~giv 137 (384)
T 4fr4_A 65 ELQIMQGL-----EHPF--LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRII 137 (384)
T ss_dssp HHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhC-----CCCC--CCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 22222222 1222 22222 23345679999999999998774321 122234455667888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHc---CCCCCCCCcchHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYAL---DFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~Di~sl~~~l~~ 366 (487)
||||||+|||++.+|.++|+|||++..+..... ...+ +++..++++++.. +..+.++|+||+|+.+++
T Consensus 138 HrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~--------gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~e 209 (384)
T 4fr4_A 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA--------GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYE 209 (384)
T ss_dssp CCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCC--------SCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHH
T ss_pred eccCcHHHeEECCCCCEEEeccceeeeccCCCceeccC--------CCccccCCeeeccCCCCCCCccceeechHHHHHH
Confidence 999999999999999999999999987654321 1111 2233333333321 124678899999999999
Q ss_pred HHHHhccCCCCc---CcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 367 FFDDALNSSVSE---LNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 367 ~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
++++.. |+.. .+...+...+.. .....| ...+
T Consensus 210 lltG~~--Pf~~~~~~~~~~~~~~~~~----~~~~~p---------------------------------------~~~s 244 (384)
T 4fr4_A 210 LLRGRR--PYHIRSSTSSKEIVHTFET----TVVTYP---------------------------------------SAWS 244 (384)
T ss_dssp HHHSSC--SSCCCTTSCHHHHHHHHHH----CCCCCC---------------------------------------TTSC
T ss_pred HHhCCC--CCCCCCCccHHHHHHHHhh----cccCCC---------------------------------------CcCC
Confidence 998543 3321 111111111110 011111 1236
Q ss_pred HHHHHHHHHHHhhcCcccccc-cchhhccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVL-YSPFTINLVD 474 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~-~~~~~~~~~~ 474 (487)
+.+++.+.+||.+||..|++. .+-..|+||.
T Consensus 245 ~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~ 276 (384)
T 4fr4_A 245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMN 276 (384)
T ss_dssp HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGT
T ss_pred HHHHHHHHHHhcCCHhHhcccHHHHHcChhhh
Confidence 778888888999999999884 4455678873
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-27 Score=239.68 Aligned_cols=282 Identities=16% Similarity=0.201 Sum_probs=160.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+++....... . ... +.+
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~-----------------------------~~~------~~~ 73 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT--H-----------------------------AKR------AYR 73 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHH--H-----------------------------HHH------HHH
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChH--H-----------------------------HHH------HHH
Confidence 789999999999999988999999999875321110 0 001 111
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecC-----CCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDY-----TSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLL 285 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~-----~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh 285 (487)
|...+..+ . +++ +.+-.++... ....++||||++| +|.+.. ....+. ...+..++..||.|||
T Consensus 74 E~~~l~~l----~-hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH 144 (371)
T 2xrw_A 74 ELVLMKCV----N-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI---QMELDHERMSYLLYQMLCGIKHLH 144 (371)
T ss_dssp HHHHHHHC----C-CTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc----C-CCCccceEEeeccccccccccceEEEEEcCCC-CHHHHH---hhccCHHHHHHHHHHHHHHHHHHH
Confidence 22222211 1 222 1122222211 1256899999987 454442 123333 3456678889999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
+.|++||||||+|||++.+|.+||+|||++........ ......+..+..||.+ ..+-.++++|+||+|+.++
T Consensus 145 ~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwslG~il~ 217 (371)
T 2xrw_A 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVI-----LGMGYKENVDIWSVGCIMG 217 (371)
T ss_dssp HTTCCCSCCCGGGEEECTTSCEEECCCCC------------------CTTCCHHHH-----TTCCCCTTHHHHHHHHHHH
T ss_pred HCCeecccCCHHHEEEcCCCCEEEEEeecccccccccc--cCCceecCCccCHHHh-----cCCCCCchHhHHHHHHHHH
Confidence 99999999999999999999999999999987654321 1122233445555544 3334578899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc-----
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT----- 440 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~----- 440 (487)
+++++. .++...+....... +........|..+..+....... ..-.|.+.-.... .........
T Consensus 218 el~~g~--~pf~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 287 (371)
T 2xrw_A 218 EMIKGG--VLFPGTDHIDQWNK---VIEQLGTPCPEFMKKLQPTVRTY----VENRPKYAGYSFE-KLFPDVLFPADSEH 287 (371)
T ss_dssp HHHHSS--CSSCCSSHHHHHHH---HHC-CCCCCHHHHTTSCHHHHHH----HHSSCCCCCCCHH-HHSCGGGSCCSSHH
T ss_pred HHHhCC--CCCCCCCHHHHHHH---HHHHhCCCCHHHHHHhhhHHHHH----HhhCccccccchh-hhcccccCcccccc
Confidence 999853 45555554333322 22222222222221111111000 0011221110000 000000000
Q ss_pred --CCCHHHHHHHHHHHhhcCcccccccchhhccccccccc
Q 011399 441 --DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFV 478 (487)
Q Consensus 441 --~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~ 478 (487)
..++.+++.+.+||..||.+|++..+.+.|+||..-+.
T Consensus 288 ~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 327 (371)
T 2xrw_A 288 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYD 327 (371)
T ss_dssp HHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred cccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhcC
Confidence 11467899999999999999999999999999975433
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-27 Score=235.88 Aligned_cols=278 Identities=18% Similarity=0.169 Sum_probs=167.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||++........ .... +.+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~~~~------~~~ 73 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM-------------------------------VKKI------AMR 73 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHH-------------------------------HHHH------HHH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchH-------------------------------HHHH------HHH
Confidence 689999999999999998899999999864422110 0011 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++. +++ +++++ .......++||||++|+.+.++... ..+.+. ...+..++..++.+||+.|+
T Consensus 74 E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i 145 (331)
T 4aaa_A 74 EIKLLKQLR-----HEN--LVNLLEVCKKKKRWYLVFEFVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHSHNI 145 (331)
T ss_dssp HHHHHHHCC-----CTT--BCCEEEEEEETTEEEEEEECCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhCC-----CCC--EeeEEEEeecCCEEEEEEecCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 222222221 222 22222 2234567899999999888776322 223333 34456778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~ 368 (487)
+|+|+||+||+++.+|.++|+|||++..+...... ......+..+..||. ...+ ..++++|+||+|+.+++++
T Consensus 146 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~y~aPE~-----~~~~~~~~~~~Di~slG~il~~l~ 219 (331)
T 4aaa_A 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV-YDDEVATRWYRAPEL-----LVGDVKYGKAVDVWAIGCLVTEMF 219 (331)
T ss_dssp CCCCCCGGGEEECTTSCEEECCCTTC-------------CCCCCTTCCHHH-----HTTCTTCCTHHHHHHHHHHHHHHH
T ss_pred EccCcChheEEEcCCCcEEEEeCCCceeecCCccc-cCCCcCCccccCccc-----ccCCCCcchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876543211 111111222334443 3222 4577889999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
++. .++...+.......+..... ..++.............+ ...|.... ..+. .......++.+++
T Consensus 220 ~g~--~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~--~~~~~~~~~~l~~ 285 (331)
T 4aaa_A 220 MGE--PLFPGDSDIDQLYHIMMCLG----NLIPRHQELFNKNPVFAG---VRLPEIKE---REPL--ERRYPKLSEVVID 285 (331)
T ss_dssp HSS--CSCCCSSHHHHHHHHHHHHC----SCCHHHHHHHHHCGGGTT---CCCCCCSS---CCCH--HHHSTTSCHHHHH
T ss_pred hCC--CCCCCCCcHHHHHHHHHHhC----CCChhhhhHhhhcccccc---ccCccccc---cchh--hhcccchhHHHHH
Confidence 853 45555444433333332221 222322211111100001 01111111 1111 1222356889999
Q ss_pred HHHHHHhhcCcccccccchhhccccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.+.+||..||..|.+..+.+.|+||..+
T Consensus 286 li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 286 LAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred HHHHHhccCcccCCCHHHHhcCchhccC
Confidence 9999999999999999999999999754
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=226.49 Aligned_cols=255 Identities=16% Similarity=0.213 Sum_probs=163.5
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|... +.||+|+||.||+|+.+.+|+.||+|+........ ..
T Consensus 19 ~i~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------~~-------- 64 (285)
T 3is5_A 19 TIDDLFIFK--RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV------------------------PM-------- 64 (285)
T ss_dssp CHHHHEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS------------------------CH--------
T ss_pred Chhhheeec--ceeccCCCeEEEEEEEccCCceEEEEEeeccccch------------------------hH--------
Confidence 355666655 78999999999999999899999999986431110 00
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH---hcCCCH--HHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKV--LDLVNT 275 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~--~~~~~~ 275 (487)
+. +.+|.+.+.++ .++. +++++ .......++||||++|++|.+..... ....+. ...+..
T Consensus 65 ~~------~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~ 131 (285)
T 3is5_A 65 EQ------IEAEIEVLKSL-----DHPN--IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMK 131 (285)
T ss_dssp HH------HHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HH------HHHHHHHHHhC-----CCch--HHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHH
Confidence 00 11222222222 1222 22222 23345679999999999998765432 133443 344567
Q ss_pred HHHHHHHHHHHCCccccCCCCCCeEEc---CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 276 GIQCSLRQLLEYGYFHADPHPGNLLAT---PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 276 ~i~~~l~~lh~~givH~Dlkp~Nili~---~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
++..+|.+||+.|++|+|+||+||+++ .++.++|+|||++..+...... .....+..+..||.+ . +-.+
T Consensus 132 qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~t~~y~aPE~~-----~-~~~~ 203 (285)
T 3is5_A 132 QMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPEVF-----K-RDVT 203 (285)
T ss_dssp HHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------------CTTGGGCCHHHH-----T-TCCC
T ss_pred HHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccC--cCcccccCcCChHHh-----c-cCCC
Confidence 788899999999999999999999994 5678999999999876543221 111123334455543 2 3457
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhH
Q 011399 353 PDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYP 432 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p 432 (487)
.++|+||+|+.+++++++. .|+...+......... ...+.+...
T Consensus 204 ~~~Di~slG~il~~ll~g~--~pf~~~~~~~~~~~~~-----------------------------~~~~~~~~~----- 247 (285)
T 3is5_A 204 FKCDIWSAGVVMYFLLTGC--LPFTGTSLEEVQQKAT-----------------------------YKEPNYAVE----- 247 (285)
T ss_dssp HHHHHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHH-----------------------------HCCCCCCC------
T ss_pred cccCeehHHHHHHHHHhCC--CCCCCCCHHHHHhhhc-----------------------------cCCcccccc-----
Confidence 7889999999999999843 4454444332221110 011111110
Q ss_pred HHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 433 YFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 433 ~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
....++++++.+.+||..||+.|++..+.+.|+||.
T Consensus 248 ------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~ 283 (285)
T 3is5_A 248 ------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283 (285)
T ss_dssp -------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGG
T ss_pred ------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhh
Confidence 113468889999999999999999999999999996
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-27 Score=255.43 Aligned_cols=248 Identities=15% Similarity=0.093 Sum_probs=163.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++...... .... +. +..
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~----------------------~~~~--------~~------~~~ 390 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ----------------------DDDV--------EC------TMV 390 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH----------------------TTTT--------HH------HHH
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEecccccc----------------------HHHH--------HH------HHH
Confidence 68999999999999999899999999987321100 0000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+ .....++.+....-+.+.....+|||||++|++|.++.... .........+..++..||.|||+.||+||
T Consensus 391 E~~~l----~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHr 466 (674)
T 3pfq_A 391 EKRVL----ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 466 (674)
T ss_dssp HHHHH----TCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECC
T ss_pred HHHHH----HhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEec
Confidence 11111 11123333322222233445678999999999998875432 22333455667888899999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||+|||++.+|.+||+|||+++..... ....+ .+.+.+++++++..+-.+.++|+||+|+.+++++++
T Consensus 467 DLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~--------~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG 538 (674)
T 3pfq_A 467 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTF--------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538 (674)
T ss_dssp CCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCC--------CSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHS
T ss_pred cCChhhEEEcCCCcEEEeecceeeccccCCcccccc--------cCCCcccCHhhhcCCCCCccceEechHHHHHHHHcC
Confidence 99999999999999999999999854221 11111 223344445555555568889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+...+...+. ......| ...++++++.+
T Consensus 539 ~--~Pf~~~~~~~~~~~i~----~~~~~~p---------------------------------------~~~s~~~~~li 573 (674)
T 3pfq_A 539 Q--APFEGEDEDELFQSIM----EHNVAYP---------------------------------------KSMSKEAVAIC 573 (674)
T ss_dssp S--CSSCCSSHHHHHHHHH----SSCCCCC---------------------------------------TTSCHHHHHHH
T ss_pred C--CCCCCCCHHHHHHHHH----hCCCCCC---------------------------------------ccCCHHHHHHH
Confidence 3 4555555443333221 1111111 13467888889
Q ss_pred HHHHhhcCcccccc-----cchhhccccc
Q 011399 451 VELLFKDGRFRHVL-----YSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~-----~~~~~~~~~~ 474 (487)
.+||.+||.+|++. .+...|+||.
T Consensus 574 ~~lL~~dP~~R~~~~~~~~~ei~~h~ff~ 602 (674)
T 3pfq_A 574 KGLMTKHPGKRLGCGPEGERDIKEHAFFR 602 (674)
T ss_dssp HHHSCSSSTTCTTCSTTHHHHHHSSGGGS
T ss_pred HHHccCCHHHCCCCCCCcHHHHhcCcccc
Confidence 99999999999887 6777888884
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-28 Score=241.84 Aligned_cols=255 Identities=18% Similarity=0.207 Sum_probs=160.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+++........ ....+. +..
T Consensus 32 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~----------------------------~~~~~~------~~~ 77 (345)
T 3hko_A 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQIN----------------------------PKDVER------IKT 77 (345)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC-------------------------------CHHHH------HHH
T ss_pred ceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccC----------------------------HHHHHH------HHH
Confidence 7899999999999999989999999998633111000 000011 223
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH----------------------------
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE---------------------------- 263 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~---------------------------- 263 (487)
|++.+.++. ++++ ++++ .......++||||++|++|.+.....
T Consensus 78 E~~~l~~l~-----hpni--v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (345)
T 3hko_A 78 EVRLMKKLH-----HPNI--ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150 (345)
T ss_dssp HHHHHHHCC-----CTTB--CCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHH
T ss_pred HHHHHHhCC-----CCCc--ceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccc
Confidence 333333331 2322 2222 23345679999999999997754200
Q ss_pred -------------hcCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCC--cEEEEecCCCCCCCHH---HHHH
Q 011399 264 -------------SQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG--KLAFLDFGMMSETPEE---ARFA 325 (487)
Q Consensus 264 -------------~~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g--~i~l~DFGla~~l~~~---~~~~ 325 (487)
.........+..++..++.|||+.|++|+|+||+||+++.++ .++|+|||++..+... ....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 230 (345)
T 3hko_A 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYG 230 (345)
T ss_dssp HSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC----
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcccccc
Confidence 000112234567888899999999999999999999998777 8999999999865331 1111
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHH
Q 011399 326 IIGHVVHMVNRDYEAMARDYYAL--DFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYY 403 (487)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~ 403 (487)
... ..+.+..++++.+.. +..++++|+||+|+.+++++++. .|+...+.......+.. . ....+
T Consensus 231 ~~~-----~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~--~pf~~~~~~~~~~~~~~---~-~~~~~--- 296 (345)
T 3hko_A 231 MTT-----KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA--VPFPGVNDADTISQVLN---K-KLCFE--- 296 (345)
T ss_dssp ---------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHHH---C-CCCTT---
T ss_pred ccc-----cCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCC--CCCCCCChHHHHHHHHh---c-ccccC---
Confidence 111 122333334444432 45577899999999999999853 45554443332222211 0 00000
Q ss_pred HHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 404 ALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 404 ~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.|. ....++.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 297 -----------------~~~---------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~ 336 (345)
T 3hko_A 297 -----------------NPN---------------YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336 (345)
T ss_dssp -----------------SGG---------------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred -----------------Ccc---------------cccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence 000 1134788999999999999999999999999999954
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.4e-28 Score=238.02 Aligned_cols=251 Identities=18% Similarity=0.165 Sum_probs=158.7
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+-|+.. +.||+|+||+||+|+++.+|+.||||+......... .....
T Consensus 57 ~~y~~~--~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~------------------------------ 103 (311)
T 3p1a_A 57 QSFQRL--SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPK-DRARK------------------------------ 103 (311)
T ss_dssp HHEEEE--EEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHH-HHHHH------------------------------
T ss_pred hheeee--heeccCCCeEEEEEEECCCCeEEEEEEecccccChH-HHHHH------------------------------
Confidence 345555 679999999999999998999999999864322110 00011
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQ 283 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~ 283 (487)
..|...+.+ ...++.+.-..-++...+..++||||+ |++|.+.........+... .+..++..+|.|
T Consensus 104 ------~~e~~~~~~----~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 172 (311)
T 3p1a_A 104 ------LAEVGSHEK----VGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAH 172 (311)
T ss_dssp ------HHHHHHHHH----HCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHH----hcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 111111111 112233221111233356679999999 5577666444433455443 456788889999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
||+.|++|||+||+|||++.+|.+||+|||++........... ...+..+..||. . .|-.++++|+||+|+.
T Consensus 173 LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~--~~gt~~y~aPE~-----~-~~~~~~~~DiwslG~i 244 (311)
T 3p1a_A 173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV--QEGDPRYMAPEL-----L-QGSYGTAADVFSLGLT 244 (311)
T ss_dssp HHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------C--CCCCGGGCCGGG-----G-GTCCSTHHHHHHHHHH
T ss_pred HHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcc--cCCCccccCHhH-----h-cCCCCchhhHHHHHHH
Confidence 9999999999999999999999999999999988765422110 001223334443 2 2445778899999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++.. .+... .....+ .. ...|+ .+....+
T Consensus 245 l~el~~g~~-~~~~~----~~~~~~----~~--~~~~~-----------------------------------~~~~~~~ 278 (311)
T 3p1a_A 245 ILEVACNME-LPHGG----EGWQQL----RQ--GYLPP-----------------------------------EFTAGLS 278 (311)
T ss_dssp HHHHHHTCC-CCSSH----HHHHHH----TT--TCCCH-----------------------------------HHHTTSC
T ss_pred HHHHHhCCC-CCCCc----cHHHHH----hc--cCCCc-----------------------------------ccccCCC
Confidence 999987421 11111 000000 00 00111 1112457
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+.+++.+.+||..||..|++..+.+.|+||.
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~ 309 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLALPVLR 309 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHhCcccc
Confidence 8899999999999999999999999999995
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-27 Score=238.51 Aligned_cols=281 Identities=16% Similarity=0.107 Sum_probs=163.3
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|... +.||+|+||.||+|++..+|+.||||+++......- .. ..
T Consensus 36 y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~--------------------------~~--- 79 (329)
T 3gbz_A 36 YRRI--TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG-----VP--------------------------GT--- 79 (329)
T ss_dssp EEEE--EEEEECSSSEEEEEEETTTTEEEEEEECCCCC------------------------------------------
T ss_pred EEEE--EEEEecCCeEEEEEEECCCCceEEEEEEcccccccc-----cc--------------------------hh---
Confidence 4444 789999999999999998999999999975422110 00 00
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh 285 (487)
+.+|+..+.++ .++++.-..-+.......++||||++| +|.++.... ...+ ....+..++..+|.|||
T Consensus 80 ---~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH 149 (329)
T 3gbz_A 80 ---AIREVSLLKEL-----QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCH 149 (329)
T ss_dssp ---CHHHHHHGGGC-----CCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHc-----CCCCcceEEEEEecCCEEEEEEecCCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 11122211111 112211111112234567899999987 776664322 2233 33455678889999999
Q ss_pred HCCccccCCCCCCeEEc-----CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 286 EYGYFHADPHPGNLLAT-----PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~-----~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
+.|++|||+||+|||++ .++.++|+|||++..+...... ......+..+..||.+. .....++++|+||+
T Consensus 150 ~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~y~aPE~~~----~~~~~~~~~Diwsl 224 (329)
T 3gbz_A 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ-FTHEIITLWYRPPEILL----GSRHYSTSVDIWSI 224 (329)
T ss_dssp HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------------CCTTCCHHHHT----TCCCCCTHHHHHHH
T ss_pred hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccc-cCCCcCCccccCHHHhc----CCCCCCcHHHHHHH
Confidence 99999999999999995 4456999999998765433211 11122233344555431 12345788999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
|+.+++++++. .++...+....+..+............+... .+... ....|.+.. ..+...+..
T Consensus 225 G~il~ell~g~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~-----~~~~~~~~~ 289 (329)
T 3gbz_A 225 ACIWAEMLMKT--PLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT-------ALPDW-KQSFPKFRG-----KTLKRVLGA 289 (329)
T ss_dssp HHHHHHHHHSS--CSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG-------GSTTC-CTTCCCCCC-----CCHHHHHGG
T ss_pred HHHHHHHHHCC--CCcCCCCHHHHHHHHHHHhCCCchhhhhhhh-------hhhhh-hhhhhhhcc-----ccHhhhccc
Confidence 99999999843 4454444433333333322111100000000 00000 001111111 111222333
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
..++++++.+.+||..||.+|++..+.+.|+||.
T Consensus 290 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~ 323 (329)
T 3gbz_A 290 LLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323 (329)
T ss_dssp GSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhCCcccC
Confidence 4689999999999999999999999999999995
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.4e-27 Score=232.18 Aligned_cols=275 Identities=16% Similarity=0.165 Sum_probs=167.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+++........ ..+.+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------------~~~~~ 49 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP--------------------------------------CTAIR 49 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------C--------------------------------------CCCCC
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccc--------------------------------------hhHHH
Confidence 6799999999999999989999999998744221100 00011
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++ .+++ +++++ .......++||||++| +|.+.........+. ...+..++..+|.|||+.|+
T Consensus 50 E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 121 (324)
T 3mtl_A 50 EVSLLKDL-----KHAN--IVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121 (324)
T ss_dssp CHHHHSCC-----CCTT--BCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhc-----CCCC--CCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 11111111 1222 22222 2334667999999986 666654333333443 34456788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+||+||+++.+|.++|+|||++........ .......+..+..||.+. .....++++|+||+|+.++++++
T Consensus 122 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~~l~~ 196 (324)
T 3mtl_A 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTK-TYDNEVVTLWYRPPDILL----GSTDYSTQIDMWGVGCIFYEMAT 196 (324)
T ss_dssp EESSCCGGGEEECTTCCEEECSSSEEECC-------------CGGGCCHHHHT----TCCCCCTHHHHHHHHHHHHHHHH
T ss_pred cCCCcCHHHEEECCCCCEEEccCcccccccCCcc-ccccccCcccccChhhhc----CCCCCCcHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999987654321 112222334455555431 12345778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCC-CCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPF-NVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
+. .++...+.......+...+..... ..|..+. .+.....-.|..... .. .......++++++
T Consensus 197 g~--~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~ 260 (324)
T 3mtl_A 197 GR--PLFPGSTVEEQLHFIFRILGTPTEETWPGILS--------NEEFKTYNYPKYRAE----AL--LSHAPRLDSDGAD 260 (324)
T ss_dssp SS--CSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG--------CHHHHHTCCCCCCCC----CH--HHHCTTSCHHHHH
T ss_pred CC--CCCCCCCHHHHHHHHHHHhCCCChHhchhhhc--------chhhcccccccccch----hh--hhhcCCCCHHHHH
Confidence 53 566666655555444443322111 1121110 000001111211110 00 1122356889999
Q ss_pred HHHHHHhhcCcccccccchhhcccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.+.+||..||..|++..+.+.|+||.-
T Consensus 261 li~~~L~~dP~~R~t~~e~l~hp~f~~ 287 (324)
T 3mtl_A 261 LLTKLLQFEGRNRISAEDAMKHPFFLS 287 (324)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred HHHHHcCcCcccCCCHHHHhcChhhhh
Confidence 999999999999999999999999953
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-28 Score=251.73 Aligned_cols=292 Identities=10% Similarity=0.055 Sum_probs=159.5
Q ss_pred cccccc--cccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAA--SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~G--s~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+| +||.||+|+++.+|+.||||+++...... . ..+. +
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~-----------------------------~~~~------~ 73 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN--E-----------------------------MVTF------L 73 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH--H-----------------------------HHHH------H
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh--H-----------------------------HHHH------H
Confidence 789999 99999999999899999999997432111 0 0011 1
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
.+|...+.++ .+++|.-..-+....+..++||||++|++|.++..... .+.+. ...+..++..||.|||+.|
T Consensus 74 ~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 148 (389)
T 3gni_B 74 QGELHVSKLF-----NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG 148 (389)
T ss_dssp HHHHHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC-----CCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1122222222 12222111111223456789999999999998754421 22333 4455678889999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-HH-----HHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcchH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FA-----IIGHVVHMVNRDYEAMARDYYAL--DFLSPDVDVTPI 360 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~Di~sl 360 (487)
|+||||||+|||++.+|.++|+|||.+..+..... .. ......+..+..||.+ .. ...++++|+||+
T Consensus 149 ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~~~Diwsl 223 (389)
T 3gni_B 149 YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL-----QQNLQGYDAKSDIYSV 223 (389)
T ss_dssp EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHH-----STTSSCBCTHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHH-----hccCCCCCcHhHHHHH
Confidence 99999999999999999999999998754321100 00 0000112223445443 22 345778999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHH-HHHHhhC--CCCCChHH-HHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIVDGL-GAVLYQY--PFNVPAYY-ALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~--~~~~p~~~-~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
|+.+++++++. .++...+........ ....... ....|... ...........+....+...... .........
T Consensus 224 G~il~el~~g~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 300 (389)
T 3gni_B 224 GITACELANGH--VPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPR-PSNGDSPSH 300 (389)
T ss_dssp HHHHHHHHHSS--CTTTTCCSTTHHHHC----------------------------------------------------
T ss_pred HHHHHHHHHCC--CCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccc-cccCCCCCC
Confidence 99999999843 344333221111111 1000000 00011100 00000000000000000000000 000000011
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
......++.+++.+.+||..||+.|++..+.+.|+||+-
T Consensus 301 ~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~ 339 (389)
T 3gni_B 301 PYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339 (389)
T ss_dssp -----CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred ccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence 123356889999999999999999999999999999964
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-27 Score=230.49 Aligned_cols=280 Identities=16% Similarity=0.121 Sum_probs=161.2
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHH
Q 011399 97 LSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLI 176 (487)
Q Consensus 97 l~~lqd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l 176 (487)
|+.+|++.||. ..+.+.-+..++....+.|+.. +.||+|+||.||+|++..+|+.||||+.+.....
T Consensus 2 l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--------- 68 (314)
T 3com_A 2 LETVQLRNPPR--RQLKKLDEDSLTKQPEEVFDVL--EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--------- 68 (314)
T ss_dssp ------------------------------CEEEE--EECC----CEEEEEEETTTCCEEEEEEEETTSCC---------
T ss_pred ccccccCCCCc--cchhhcCchhhhhcchhhhhhh--eeeccCCCeEEEEEEECCCCCEEEEEecCchHHH---------
Confidence 56788888873 4555666777777777777776 7899999999999999888999999998643110
Q ss_pred HHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCC
Q 011399 177 RGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGV 254 (487)
Q Consensus 177 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~ 254 (487)
. . +.+|...+.++ .+++ +++++. ...+..++||||++|+
T Consensus 69 ------------------~--------~------~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~ 109 (314)
T 3com_A 69 ------------------Q--------E------IIKEISIMQQC-----DSPH--VVKYYGSYFKNTDLWIVMEYCGAG 109 (314)
T ss_dssp ------------------H--------H------HHHHHHHHHTC-----CCTT--BCCEEEEEEETTEEEEEEECCTTE
T ss_pred ------------------H--------H------HHHHHHHHHhC-----CCCC--CccEEEEEEeCCEEEEEeecCCCC
Confidence 0 0 11122222211 1222 222222 2245678999999999
Q ss_pred CcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHH
Q 011399 255 KLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVH 332 (487)
Q Consensus 255 ~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~ 332 (487)
+|.++........+.. ..+..++..++.+||+.|++|+|+||.||+++.+|.++|+|||++..+....... .....+
T Consensus 110 ~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~ 188 (314)
T 3com_A 110 SVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR-NTVIGT 188 (314)
T ss_dssp EHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCB-CCCCSC
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcccc-CccCCC
Confidence 9998865444445543 3445778889999999999999999999999999999999999997664321100 000011
Q ss_pred HHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHH
Q 011399 333 MVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTV 412 (487)
Q Consensus 333 ~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~ 412 (487)
..+..|| ....+..+++.|+||+|+.+++++++. .++...+.......+
T Consensus 189 ~~y~aPE-----~~~~~~~~~~~Di~slG~il~~l~~g~--~p~~~~~~~~~~~~~------------------------ 237 (314)
T 3com_A 189 PFWMAPE-----VIQEIGYNCVADIWSLGITAIEMAEGK--PPYADIHPMRAIFMI------------------------ 237 (314)
T ss_dssp GGGCCHH-----HHSSSCBCTTHHHHHHHHHHHHHHHSS--CTTTTSCHHHHHHHH------------------------
T ss_pred CCccChh-----hcCCCCCCccccHHHHHHHHHHHHhCC--CCCCCCChHHHHHHH------------------------
Confidence 2233344 333444578899999999999999843 344333321111100
Q ss_pred HHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 413 LEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 413 leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.....|.+.. ....++.+++.+.+||..||..|++..+.+.|+||.-.
T Consensus 238 ----~~~~~~~~~~------------~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~ 285 (314)
T 3com_A 238 ----PTNPPPTFRK------------PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285 (314)
T ss_dssp ----HHSCCCCCSS------------GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred ----hcCCCcccCC------------cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence 0011122211 11236778899999999999999999999999999644
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-27 Score=229.22 Aligned_cols=246 Identities=17% Similarity=0.206 Sum_probs=160.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+|+.||||+..+....... .... +.+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------~~~~------~~~ 58 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG------------------------------VEHQ------LRR 58 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHT------------------------------CHHH------HHH
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhh------------------------------HHHH------HHH
Confidence 7899999999999999989999999998642111100 0011 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++ .+++ +++++ ....+..++||||++|++|.+..... ...+. ...+..++..++.|||+.|+
T Consensus 59 e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i 130 (279)
T 3fdn_A 59 EVEIQSHL-----RHPN--ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRV 130 (279)
T ss_dssp HHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHcC-----CCCC--CcchhheEecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 22222211 1222 23332 23345679999999999998764332 23343 34455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++........... .+.+..++++....+..+++.|+||+|+.++++++
T Consensus 131 ~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 202 (279)
T 3fdn_A 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL--------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 202 (279)
T ss_dssp EECCCCGGGEEECTTSCEEECSCCEESCC----------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred ecccCChHhEEEcCCCCEEEEeccccccCCccccccc--------CCCCCccCHhHhccCCCCccchhHhHHHHHHHHHH
Confidence 9999999999999999999999999877655432222 22233334444445566788999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+.......+.. .....| ...++.+++.
T Consensus 203 g~--~p~~~~~~~~~~~~~~~----~~~~~~---------------------------------------~~~~~~~~~l 237 (279)
T 3fdn_A 203 GK--PPFEANTYQETYKRISR----VEFTFP---------------------------------------DFVTEGARDL 237 (279)
T ss_dssp SS--CTTCCSSHHHHHHHHHH----TCCCCC---------------------------------------TTSCHHHHHH
T ss_pred CC--CCCCCCcHHHHHHHHHh----CCCCCC---------------------------------------CcCCHHHHHH
Confidence 43 34444443332222111 011111 1245778889
Q ss_pred HHHHHhhcCcccccccchhhccccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
+.+||..||..|++..+.+.|+||.-.
T Consensus 238 i~~~l~~~p~~Rps~~e~l~h~~~~~~ 264 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLEHPWITAN 264 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHhccChhhCCCHHHHhhCccccCC
Confidence 999999999999999999999999543
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-28 Score=244.67 Aligned_cols=255 Identities=14% Similarity=0.184 Sum_probs=165.0
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|... +.||+|+||+||+|+++.+|+.||+|++....... .. .
T Consensus 51 ~~y~i~--~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~----~~-----------------------------~- 94 (387)
T 1kob_A 51 DYYDIL--EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----KY-----------------------------T- 94 (387)
T ss_dssp GTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----HH-----------------------------H-
T ss_pred cceEEE--EEEecCCCEEEEEEEECCCCCEEEEEEecccchhh----HH-----------------------------H-
Confidence 334444 78999999999999999899999999987542211 00 0
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSL 281 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l 281 (487)
+.+|+..+.++ .+++ +.+++ .......++||||++|++|.+.........+. ...+..++..+|
T Consensus 95 -----~~~E~~il~~l-----~hpn--Iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL 162 (387)
T 1kob_A 95 -----VKNEISIMNQL-----HHPK--LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 162 (387)
T ss_dssp -----HHHHHHHHTTC-----CSTT--BCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhC-----CCcC--CCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 11122222111 1222 12222 22345678999999999998764433223343 445567888899
Q ss_pred HHHHHCCccccCCCCCCeEEcC--CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 282 RQLLEYGYFHADPHPGNLLATP--EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~--~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
.|||+.|++||||||+|||++. ++.++|+|||++..+....... ...+.+..++++....+..+.++|+||
T Consensus 163 ~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~-------~~~gt~~y~aPE~~~~~~~~~~~DiwS 235 (387)
T 1kob_A 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK-------VTTATAEFAAPEIVDREPVGFYTDMWA 235 (387)
T ss_dssp HHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE-------EECSSGGGCCHHHHTTCCBCHHHHHHH
T ss_pred HHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCccee-------eeccCCCccCchhccCCCCCCcccEee
Confidence 9999999999999999999984 4779999999998775431100 011223333344444445577889999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+|+.+++++++. .|+...+.......+.. ..... ++. ..
T Consensus 236 lG~il~elltg~--~Pf~~~~~~~~~~~i~~----~~~~~---------------------~~~--------------~~ 274 (387)
T 1kob_A 236 IGVLGYVLLSGL--SPFAGEDDLETLQNVKR----CDWEF---------------------DED--------------AF 274 (387)
T ss_dssp HHHHHHHHHHSC--CSSCCSSHHHHHHHHHH----CCCCC---------------------CSS--------------TT
T ss_pred HhHHHHHHHhCC--CCCCCCCHHHHHHHHHh----CCCCC---------------------Ccc--------------cc
Confidence 999999999843 34444443222221110 00000 010 11
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
...++++++.+.+||..||..|++..+.+.|+||.-.
T Consensus 275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 311 (387)
T 1kob_A 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311 (387)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence 2457888999999999999999999999999999644
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-26 Score=229.80 Aligned_cols=252 Identities=15% Similarity=0.129 Sum_probs=163.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++...... ... .. +.+
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~--------~~------~~~ 77 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-----------------------DCR--------AE------ILH 77 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-----------------------ECH--------HH------HHH
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-----------------------HHH--------HH------HHH
Confidence 67999999999999999899999999986432110 000 01 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~--~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ ..++.+.-..-+.......++||||++|++|.++.... ....+ ....+..++..+|.+||+.|++
T Consensus 78 e~~~l~~l----~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~giv 153 (327)
T 3lm5_A 78 EIAVLELA----KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153 (327)
T ss_dssp HHHHHHHT----TTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhc----cCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 22222222 22233221112233456679999999999998874321 12233 3445567888899999999999
Q ss_pred ccCCCCCCeEEcC---CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 291 HADPHPGNLLATP---EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 291 H~Dlkp~Nili~~---~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|||+||+||+++. +|.++|+|||++..+...... .. ..+.+..++++....+..++++|+||+|+.++++
T Consensus 154 H~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~--~~-----~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l 226 (327)
T 3lm5_A 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL--RE-----IMGTPEYLAPEILNYDPITTATDMWNIGIIAYML 226 (327)
T ss_dssp CSCCCGGGEEESCBTTBCCEEECCGGGCEEC----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred cCcCChHHEEEecCCCCCcEEEeeCccccccCCcccc--cc-----ccCCcCccCCeeecCCCCCchhhHHHHHHHHHHH
Confidence 9999999999997 789999999999887644221 11 1233334444444555567889999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r 447 (487)
+++. .|+...+.......+... ....++ ......++.++
T Consensus 227 l~g~--~pf~~~~~~~~~~~i~~~----~~~~~~-----------------------------------~~~~~~~~~~~ 265 (327)
T 3lm5_A 227 LTHT--SPFVGEDNQETYLNISQV----NVDYSE-----------------------------------ETFSSVSQLAT 265 (327)
T ss_dssp HHSS--CSSCCSSHHHHHHHHHHT----CCCCCT-----------------------------------TTTTTSCHHHH
T ss_pred HhCC--CCCCCCCchHHHHHHHhc----ccccCc-----------------------------------hhhcccCHHHH
Confidence 9853 344444433322222110 111110 01124567888
Q ss_pred HHHHHHHhhcCcccccccchhhccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+.+.+||..||..|++..+.+.|+||.
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~h~~~~ 292 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLSHSWLQ 292 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTCGGGC
T ss_pred HHHHHHcCCChhhCcCHHHHhCCHhhc
Confidence 999999999999999999999999994
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.8e-28 Score=241.34 Aligned_cols=288 Identities=16% Similarity=0.126 Sum_probs=171.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||++....... ... .. +.+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------~~~--------~~------~~~ 65 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-----------------------GFP--------IT------ALR 65 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-----------------------SSC--------HH------HHH
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-----------------------cch--------HH------HHH
Confidence 78999999999999998899999999885432110 000 00 111
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeec-------CCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWD-------YTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQ 283 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~-------~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~ 283 (487)
|...+.++ . +++ +.+-.++.. ..+..++||||++| ++.+.........+ ....+..++..+|.|
T Consensus 66 E~~~l~~l----~-h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 139 (351)
T 3mi9_A 66 EIKILQLL----K-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139 (351)
T ss_dssp HHHHHHHC----C-CTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc----c-CCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 22222221 1 111 111111111 13456899999987 44433222222233 345566788899999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH---HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR---FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
||+.|++|||+||+|||++.+|.++|+|||++..+..... ........+..+..||.+. .....++++|+||+
T Consensus 140 LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~Diwsl 215 (351)
T 3mi9_A 140 IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLL----GERDYGPPIDLWGA 215 (351)
T ss_dssp HHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHT----TCCSCCTHHHHHHH
T ss_pred HHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhc----CCCCCCcHhHHHHH
Confidence 9999999999999999999999999999999876532100 0000011122334444331 12345788999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc-
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL- 439 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~- 439 (487)
|+.+++++++ ..++...+.......+.......+....+.... . .............+.+...+.
T Consensus 216 G~il~ell~g--~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~~~~~~~~~~ 281 (351)
T 3mi9_A 216 GCIMAEMWTR--SPIMQGNTEQHQLALISQLCGSITPEVWPNVDN----Y--------ELYEKLELVKGQKRKVKDRLKA 281 (351)
T ss_dssp HHHHHHHHHS--SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG----C--------GGGTSSCCCSSCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCCCCCChHHHHHHHHHHhCCCChhhcccccc----c--------hhhcccccccccccCHHHHhhh
Confidence 9999999984 345555555555555554444333222222100 0 000000000000000111111
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccccccccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCDI 482 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~ 482 (487)
...++.+++.+.+||..||..|++..+.+.|+||.-.+.+.+.
T Consensus 282 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~ 324 (351)
T 3mi9_A 282 YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDL 324 (351)
T ss_dssp HHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCCCS
T ss_pred ccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCcccc
Confidence 1247899999999999999999999999999999988888764
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=221.93 Aligned_cols=273 Identities=14% Similarity=0.078 Sum_probs=160.2
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.+.||+|+||+||+|++..+|+.||||+++....... .. +.
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---------------------------------~~------~~ 58 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR---------------------------------SR------VF 58 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCH---------------------------------HH------HH
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhH---------------------------------HH------HH
Confidence 3679999999999999988999999999864321100 01 11
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
+|...+.+ ...++++.-..-+.......++||||++|++|.++..... ........+..++..+|.|||+.|++|
T Consensus 59 ~E~~~l~~----~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 134 (316)
T 2ac3_A 59 REVEMLYQ----CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAH 134 (316)
T ss_dssp HHHHHHHH----TCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHH----hcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 12211111 1122222111111223456789999999999988754332 222334456678889999999999999
Q ss_pred cCCCCCCeEEcCCCc---EEEEecCCCCCCCHHHHHH------HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 292 ADPHPGNLLATPEGK---LAFLDFGMMSETPEEARFA------IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~---i~l~DFGla~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
||+||+||+++.++. ++|+|||++..+....... ......+..+..||.+.......+..+.++|+||+|+
T Consensus 135 ~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~ 214 (316)
T 2ac3_A 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV 214 (316)
T ss_dssp CCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHH
T ss_pred CCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHH
Confidence 999999999998776 9999999998764321110 1111123345566655420000122378899999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+++++++.. ++...+.....|.. ....+.....+...+ . ...+.+. .......
T Consensus 215 il~~l~~g~~--pf~~~~~~~~~~~~-------~~~~~~~~~~~~~~i------~-~~~~~~~----------~~~~~~~ 268 (316)
T 2ac3_A 215 ILYILLSGYP--PFVGRCGSDCGWDR-------GEACPACQNMLFESI------Q-EGKYEFP----------DKDWAHI 268 (316)
T ss_dssp HHHHHHHSSC--SCCCCCCSCSCC-----------CCHHHHHHHHHHH------H-HCCCCCC----------HHHHTTS
T ss_pred HHHHHHHCCC--CCcccccccccccc-------cccchhHHHHHHHHH------h-ccCcccC----------chhcccC
Confidence 9999998543 33221100000000 001111111111111 0 0011111 0111245
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 269 ~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~ 300 (316)
T 2ac3_A 269 SCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300 (316)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred CHHHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence 78899999999999999999999999999995
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-28 Score=246.11 Aligned_cols=250 Identities=15% Similarity=0.124 Sum_probs=153.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++... ....++.++... ..|+|++.+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~E~~~~~~~---------~~hp~iv~l---------------- 120 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--KARREVELHWRA---------SQCPHIVRI---------------- 120 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH--HHHHHHHHHHHH---------TTSTTBCCE----------------
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcch--hHHHHHHHHHHh---------cCCCCcceE----------------
Confidence 57999999999999999899999999986431 111111111000 012222221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec---CCCCceEEEeecCCCCcCcHHHHHh-cCCC--HHHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD---YTSGKVLTMEWVEGVKLNEQVAIES-QGLK--VLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~---~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~--~~~~~~~~i~~~l~~lh~~ 287 (487)
-.++.. .....+|||||++|++|.++..... ..++ ....+..++..+|.|||+.
T Consensus 121 --------------------~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 180 (400)
T 1nxk_A 121 --------------------VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 180 (400)
T ss_dssp --------------------EEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------eEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 112211 1234689999999999988754221 1233 3445667888999999999
Q ss_pred CccccCCCCCCeEEcC---CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 288 GYFHADPHPGNLLATP---EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 288 givH~Dlkp~Nili~~---~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
||+||||||+|||++. +|.+||+|||+++........ .....+..+..||. +..+..+.++|+||+|+.+
T Consensus 181 ~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~-----~~~~~~~~~~DiwslG~il 253 (400)
T 1nxk_A 181 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEV-----LGPEKYDKSCDMWSLGVIM 253 (400)
T ss_dssp TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------------CTTCCGGG-----SCCCCSSSHHHHHHHHHHH
T ss_pred CccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc--ccCCCCCCccCHhh-----cCCCCCCCcccHHHHHHHH
Confidence 9999999999999997 788999999999877643221 11122233334443 2334456778999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++++++.. ++...+. ....+.....++ .+ ....|. ......++
T Consensus 254 ~ell~g~~--pf~~~~~---------------~~~~~~~~~~i~-----~~--~~~~~~-------------~~~~~~s~ 296 (400)
T 1nxk_A 254 YILLCGYP--PFYSNHG---------------LAISPGMKTRIR-----MG--QYEFPN-------------PEWSEVSE 296 (400)
T ss_dssp HHHHHSSC--SCCCCTT---------------CSSCCSHHHHHH-----HT--CCCCCT-------------TTTTTSCH
T ss_pred HHHHhCCC--CCCCCcc---------------ccccHHHHHHHH-----cC--cccCCC-------------cccccCCH
Confidence 99998543 3322110 001111000000 00 000010 00123577
Q ss_pred HHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
++++.+.+||..||..|++..+.+.|+||.
T Consensus 297 ~~~~li~~~L~~dP~~Rpt~~eil~hp~~~ 326 (400)
T 1nxk_A 297 EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326 (400)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence 888999999999999999999999999984
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-28 Score=240.57 Aligned_cols=263 Identities=16% Similarity=0.182 Sum_probs=169.1
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|... +.||+|+||.||+|+++.+|+.||||+++........ .....
T Consensus 9 ~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-------------------~~~~~-------- 59 (321)
T 2a2a_A 9 KVEDFYDIG--EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR-------------------RGVSR-------- 59 (321)
T ss_dssp CHHHHEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS-------------------SSBCH--------
T ss_pred hhhccEEEe--eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc-------------------cchhH--------
Confidence 455556655 7899999999999999989999999998754211000 00000
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCS 280 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~ 280 (487)
+. +.+|+..+.++ .++++.-..-+.......++||||++|++|.++... .... .....+..++..+
T Consensus 60 ~~------~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~a 127 (321)
T 2a2a_A 60 EE------IEREVSILRQV-----LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDG 127 (321)
T ss_dssp HH------HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHhC-----CCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 01 22223222222 122221111122334567999999999999887432 1222 3344556788889
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCC----cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEG----KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g----~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
|.|||+.|++|+|+||+||+++.+| .++|+|||++..+...... .. ..+++..++++....+..++++|
T Consensus 128 L~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~--~~-----~~gt~~y~aPE~~~~~~~~~~~D 200 (321)
T 2a2a_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KN-----IFGTPEFVAPEIVNYEPLGLEAD 200 (321)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCC--CC-----CCSCGGGCCHHHHTTCCCCTHHH
T ss_pred HHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccc--cc-----cCCCCCccCcccccCCCCCCccc
Confidence 9999999999999999999999888 7999999999876543110 00 11222333344444455678899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .|+...+.......+. ......|+.
T Consensus 201 i~slG~il~~l~~g~--~pf~~~~~~~~~~~i~----~~~~~~~~~---------------------------------- 240 (321)
T 2a2a_A 201 MWSIGVITYILLSGA--SPFLGDTKQETLANIT----SVSYDFDEE---------------------------------- 240 (321)
T ss_dssp HHHHHHHHHHHHHSC--CSSCCSSHHHHHHHHH----TTCCCCCHH----------------------------------
T ss_pred cHHHHHHHHHHHHCC--CCCCCCCHHHHHHHHH----hcccccChh----------------------------------
Confidence 999999999999843 3444433332222211 111111111
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.....++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 241 -~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~ 277 (321)
T 2a2a_A 241 -FFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (321)
T ss_dssp -HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTS
T ss_pred -hhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence 1224578889999999999999999999999999995
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-26 Score=238.93 Aligned_cols=281 Identities=17% Similarity=0.149 Sum_probs=171.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||+++..... ... +..
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~----------------------------------~~~------~~~ 142 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF----------------------------------HRQ------AAE 142 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHH----------------------------------HHH------HHH
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCccch----------------------------------HHH------HHH
Confidence 7899999999999999989999999999754211 011 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
|.+.+..+++. .......+..++. ......++||||++| +|.++..... .+.+. ...+..++..+|.|||+.|
T Consensus 143 E~~~l~~l~~~-~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 220 (429)
T 3kvw_A 143 EIRILEHLRKQ-DKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220 (429)
T ss_dssp HHHHHHHHHTT-CTTSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhc-cccCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22222222221 1112223333333 234667899999975 6766644332 22443 4456678889999999999
Q ss_pred ccccCCCCCCeEEcCCCc--EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGK--LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~--i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|+||||||+|||++.+|. ++|+|||++........ .. ..+..+..||.+ .-+..++++|+||+|+.+++
T Consensus 221 ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~-~~---~gt~~y~aPE~~-----~~~~~~~~~DiwSlG~il~e 291 (429)
T 3kvw_A 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVY-TY---IQSRFYRAPEVI-----LGARYGMPIDMWSLGCILAE 291 (429)
T ss_dssp EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCC-SS---CSCGGGCCHHHH-----HTBCCCTHHHHHHHHHHHHH
T ss_pred eecCCCCHHHeEEccCCCcceEEeecccceecCCccc-cc---CCCCCccChHHH-----hCCCCCchHHHHhHHHHHHH
Confidence 999999999999999987 99999999976543211 01 112234455543 34445888999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCCh-HHHHHHHHHHHHHHhhhhhCCCCC--------------------
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPA-YYALILRSLTVLEGLALYADPNFK-------------------- 425 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~-~~~~l~r~l~~leg~~~~ldP~~~-------------------- 425 (487)
++++. .++...+....+..+...+ +.|+ .+....+... .-+...-.|.+.
T Consensus 292 lltG~--~pf~~~~~~~~l~~i~~~~-----~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (429)
T 3kvw_A 292 LLTGY--PLLPGEDEGDQLACMIELL-----GMPSQKLLDASKRAK--NFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRG 362 (429)
T ss_dssp HHHSS--CSSCCSSHHHHHHHHHHHH-----CCCCHHHHHTBTTHH--HHBCTTSCBTTSCEECCCC--CEECCEECTTC
T ss_pred HHhCC--CCCCCCCHHHHHHHHHHHc-----CCCCHHHHHhhhhhh--hccCCCCCcccccccccccccccccccccchh
Confidence 99853 4555555444444443322 1222 2111000000 000000000000
Q ss_pred ---hHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 426 ---VLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 426 ---~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.......+ ...+....++.+++.+.+||..||.+|++..+.+.|+||.-
T Consensus 363 ~~~~~~~~~~~-~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~ 414 (429)
T 3kvw_A 363 KLRGPPESREW-GNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414 (429)
T ss_dssp CEECSTTCSCH-HHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-
T ss_pred hccCCccchhh-HhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhcc
Confidence 00001111 22333456899999999999999999999999999999964
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-26 Score=221.07 Aligned_cols=262 Identities=14% Similarity=0.112 Sum_probs=155.7
Q ss_pred HhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHH
Q 011399 119 ELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALI 198 (487)
Q Consensus 119 ~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~ 198 (487)
..|..+++ |... +.||+|+||.||+|++..+|+.||||+..+..... ...
T Consensus 5 ~~g~~~~~-y~~~--~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~~----------------------- 54 (278)
T 3cok_A 5 CIGEKIED-FKVG--NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK----AGM----------------------- 54 (278)
T ss_dssp HHCSSGGG-EEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----TTC-----------------------
T ss_pred cccccccc-ceee--eeecCCCceEEEEEEEccCCceEEEEEeehhhhhh----hhH-----------------------
Confidence 44555554 4443 78999999999999998899999999986321110 000
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHH
Q 011399 199 DEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTG 276 (487)
Q Consensus 199 ~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~ 276 (487)
.+. +.+|+..+.++ .++++.-..-+....+..++||||++|++|.++........+. ...+..+
T Consensus 55 ---~~~------~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~q 120 (278)
T 3cok_A 55 ---VQR------VQNEVKIHCQL-----KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120 (278)
T ss_dssp ---HHH------HHHHHHHHTTB-----CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHH
T ss_pred ---HHH------HHHHHHHHHhC-----CCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHH
Confidence 011 11222222111 1222211111223345678999999999998874432233443 3445577
Q ss_pred HHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 277 i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
+..++.+||+.|++|+|+||+||+++.+|.++|+|||++........... ... +++..++++....+..+++.|
T Consensus 121 i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~-~~~-----~~~~y~aPE~~~~~~~~~~~D 194 (278)
T 3cok_A 121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY-TLC-----GTPNYISPEIATRSAHGLESD 194 (278)
T ss_dssp HHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------------CTH
T ss_pred HHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce-ecc-----CCCCcCCcchhcCCCCCchhh
Confidence 88899999999999999999999999999999999999987754322111 111 122333333333344578899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .++...+....... ....++.
T Consensus 195 i~slG~il~~l~~g~--~p~~~~~~~~~~~~-------------------------------~~~~~~~----------- 230 (278)
T 3cok_A 195 VWSLGCMFYTLLIGR--PPFDTDTVKNTLNK-------------------------------VVLADYE----------- 230 (278)
T ss_dssp HHHHHHHHHHHHHSS--CSSCCCSCC------------------------------------CCSSCCC-----------
T ss_pred HHHHHHHHHHHHhCC--CCCCChhHHHHHHH-------------------------------HhhcccC-----------
Confidence 999999999999743 23322211100000 0001110
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.....++++++.+.+||..||..|++..+.+.|+||.-
T Consensus 231 -~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 268 (278)
T 3cok_A 231 -MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR 268 (278)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred -CccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence 01134678899999999999999999999999999964
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-27 Score=250.20 Aligned_cols=258 Identities=16% Similarity=0.196 Sum_probs=168.2
Q ss_pred CCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 122 ~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
..+.+.|... +.||+|+||.||+|+++.+|+.||||++....... .....
T Consensus 22 ~~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------~~~~~------ 71 (484)
T 3nyv_A 22 AIFSDRYKGQ--RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ----------------------KTDKE------ 71 (484)
T ss_dssp CCHHHHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB----------------------SSCHH------
T ss_pred CcccCceEEe--eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc----------------------chHHH------
Confidence 3455666655 78999999999999999899999999985431100 00000
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGI 277 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i 277 (487)
. +.+|+..+.++ ++++ |++++ ....+..++||||++|++|.+.... ....+. ...+..++
T Consensus 72 --~------~~~E~~~l~~l-----~hpn--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi 135 (484)
T 3nyv_A 72 --S------LLREVQLLKQL-----DHPN--IMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-RKRFSEVDAARIIRQV 135 (484)
T ss_dssp --H------HHHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-CSCCBHHHHHHHHHHH
T ss_pred --H------HHHHHHHHHhC-----CCCC--CCcEEEEEEeCCEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHH
Confidence 0 11122222111 1222 22222 2234567899999999999776432 223333 34456788
Q ss_pred HHHHHHHHHCCccccCCCCCCeEE---cCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLA---TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili---~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (487)
..+|.|||++|++||||||+|||+ +.++.++|+|||++..+..... ......+..+..||.+ .|..+++
T Consensus 136 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~------~~~~~~~ 207 (484)
T 3nyv_A 136 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEVL------HGTYDEK 207 (484)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS--HHHHTTGGGTCCHHHH------HTCCCTH
T ss_pred HHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc--cccCCCCccccCceee------cCCCCCc
Confidence 899999999999999999999999 4678999999999876543321 1122233445556643 2345788
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHH
Q 011399 355 VDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYF 434 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~ 434 (487)
+|+||+|+.+++++++. .|+...+...+...+... ...+..|
T Consensus 208 ~DiwslG~il~~ll~g~--~pf~~~~~~~~~~~i~~~--~~~~~~~---------------------------------- 249 (484)
T 3nyv_A 208 CDVWSTGVILYILLSGC--PPFNGANEYDILKKVEKG--KYTFELP---------------------------------- 249 (484)
T ss_dssp HHHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHHHC--CCCCCSG----------------------------------
T ss_pred ceeHHHHHHHHHHHHCC--CCCCCCCHHHHHHHHHcC--CCCCCCc----------------------------------
Confidence 99999999999999854 455544443333222110 0001100
Q ss_pred HHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 435 AKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 435 ~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.....++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 250 ---~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~ 286 (484)
T 3nyv_A 250 ---QWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286 (484)
T ss_dssp ---GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred ---ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhc
Confidence 0123578899999999999999999999999999994
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-27 Score=240.39 Aligned_cols=283 Identities=16% Similarity=0.116 Sum_probs=168.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+++........ +..... +.+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~----------------------------~~~~~~------~~~ 61 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK----------------------------DGINRT------ALR 61 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC----------------------------------------CTH------HHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhh----------------------------hhhhHH------HHH
Confidence 7899999999999999888999999998754221100 000011 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh--cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ .++++.-..-+.......++||||++| +|.+...... ........+..++..++.|||+.|++|
T Consensus 62 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 135 (346)
T 1ua2_A 62 EIKLLQEL-----SHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135 (346)
T ss_dssp HHHHHHHC-----CCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHhhC-----CCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEEC
Confidence 33332222 123221111122345677999999997 6655432221 334566677788999999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+||+++.+|.++|+|||++..+...... ......+..+..||.+. .....+.++|+||+|+.+++++++.
T Consensus 136 ~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~ell~g~ 210 (346)
T 1ua2_A 136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA-YTHQVVTRWYRAPELLF----GARMYGVGVDMWAVGCILAELLLRV 210 (346)
T ss_dssp CCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC-CCCSCCCCTTCCHHHHT----TCSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred CCCCHHHEEEcCCCCEEEEecccceeccCCccc-CCcccccccccCchHhh----CCCCCCchhhhHhHHHHHHHHHHCC
Confidence 999999999999999999999999876432110 00001112233444331 1233567789999999999999843
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCC-CCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYP-FNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~-~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
.++...+....+..+........ ...|... -.|++.......+.-...+....++.+++.+
T Consensus 211 --~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 272 (346)
T 1ua2_A 211 --PFLPGDSDLDQLTRIFETLGTPTEEQWPDMC----------------SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLI 272 (346)
T ss_dssp --CSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT----------------SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHHcCCCChhhhhhhc----------------cCcccccccccCCCChHHhhccCCHHHHHHH
Confidence 34444443333333332221111 0111100 0011000000000001233456789999999
Q ss_pred HHHHhhcCcccccccchhhcccccccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
.+||..||..|++..+.+.|+||.-.+.+
T Consensus 273 ~~~L~~dP~~Rpt~~ell~h~~f~~~~~~ 301 (346)
T 1ua2_A 273 QGLFLFNPCARITATQALKMKYFSNRPGP 301 (346)
T ss_dssp HHHHCSSTTTSCCHHHHHTSGGGTSSSCC
T ss_pred HHHhccChhhCCCHHHHhcChhhhcCCCC
Confidence 99999999999999999999999755433
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-27 Score=251.77 Aligned_cols=257 Identities=14% Similarity=0.175 Sum_probs=163.0
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|... +.||+|+||.||+|+++.+|+.||||+++......- ..
T Consensus 34 ~~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------~~-------- 80 (494)
T 3lij_A 34 HLSEMYQRV--KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-----------------------SN-------- 80 (494)
T ss_dssp CHHHHEEEE--EEEECC---EEEEEEETTTCCEEEEEEEEC-----C-----------------------TT--------
T ss_pred chhcCeEEe--eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-----------------------HH--------
Confidence 355666666 789999999999999998999999999875421100 00
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQ 278 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~ 278 (487)
.. +.+|...+.++ ++++ |.+++ .......++|||||+|++|.+.... ....+ ....+..++.
T Consensus 81 ~~------~~~E~~~l~~l-----~hpn--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qi~ 146 (494)
T 3lij_A 81 SK------LLEEVAVLKLL-----DHPN--IMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-RMKFNEVDAAVIIKQVL 146 (494)
T ss_dssp HH------HHHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHhC-----CCCC--CCeEEEEEEeCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 00 11122222111 1222 22222 2334567899999999999776432 23333 3445667888
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcCC---CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATPE---GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV 355 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~~---g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (487)
.+|.|||+.|++||||||+|||++.+ +.++|+|||++..+...... .....+..+..||. .. +..++++
T Consensus 147 ~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~--~~~~gt~~y~aPE~-----l~-~~~~~~~ 218 (494)
T 3lij_A 147 SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM--KERLGTAYYIAPEV-----LR-KKYDEKC 218 (494)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCB--CCCCSCTTTCCHHH-----HT-TCBCTHH
T ss_pred HHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccc--cccCCCcCeeCHHH-----Hc-ccCCCch
Confidence 99999999999999999999999864 45999999999876433110 00111223444553 32 4457889
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHH
Q 011399 356 DVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFA 435 (487)
Q Consensus 356 Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~ 435 (487)
|+||+|+.+++++++. .|+...+...+...+... ....++ |
T Consensus 219 DiwslG~il~~ll~g~--~pf~~~~~~~~~~~i~~~----~~~~~~--------------------~------------- 259 (494)
T 3lij_A 219 DVWSIGVILFILLAGY--PPFGGQTDQEILRKVEKG----KYTFDS--------------------P------------- 259 (494)
T ss_dssp HHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHHHT----CCCCCS--------------------G-------------
T ss_pred hHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHhC----CCCCCc--------------------h-------------
Confidence 9999999999999853 455554443333222110 011000 0
Q ss_pred HHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 436 KRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 436 ~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.....++.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 260 --~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~ 297 (494)
T 3lij_A 260 --EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE 297 (494)
T ss_dssp --GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred --hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence 01245788999999999999999999999999999953
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-28 Score=248.18 Aligned_cols=303 Identities=15% Similarity=0.158 Sum_probs=172.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||++..+... ...++.+++ ...|+|++.+++.+...-..+.....
T Consensus 13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-~~~E~~il~----------~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-KNRELDIMK----------VLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp EEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-CCHHHHHHT----------TCCCTTBCCEEEEEEEC---------
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-HHHHHHHHH----------HcCCCCccchhheeeecCcccccccc
Confidence 7899999999999999889999999998755322 223333333 23488887766543111000000000
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHH--H-hcCCC--HHHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAI--E-SQGLK--VLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~--~-~~~~~--~~~~~~~~i~~~l~~lh~~ 287 (487)
.......+............+.++. ......++||||++| +|.+.... . ....+ ....+..++..+|.|||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160 (383)
T ss_dssp ----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0000001110000000000111111 112335799999996 66554332 1 12233 3445667888999999999
Q ss_pred CccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|++|||+||+||+++ .+|.++|+|||++..+...... .....+..+..||.+. .....++++|+||+|+.+++
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS--VAYICSRFYRAPELML----GATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC--CCCCCCSSCCCHHHHT----TCSSCCTHHHHHHHHHHHHH
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC--cCcccCCCccCHHHhc----CCCCCCcchhhhhHHHHHHH
Confidence 999999999999997 6899999999999876433210 0001122244455431 12235788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHH----hHhHHHHHHhccCC
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA----ASYPYFAKRLLTDP 442 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~----~~~p~~~~~l~~~~ 442 (487)
++++. .++...+....+..+...+. .|+.- .+ ...+|.+.-.. ...+ ....+....
T Consensus 235 ll~g~--~pf~~~~~~~~~~~i~~~~g-----~p~~~-----~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 294 (383)
T 3eb0_A 235 LILGK--PLFSGETSIDQLVRIIQIMG-----TPTKE-----QM-------IRMNPHYTEVRFPTLKAKD-WRKILPEGT 294 (383)
T ss_dssp HHHSS--CSSCCSSHHHHHHHHHHHHC-----CCCHH-----HH-------HHHCTTC--CCCCCCCCCC-HHHHSCTTC
T ss_pred HHhCC--CCCCCCChHHHHHHHHHHhC-----CCCHH-----HH-------HHhCcccccccCCccCccc-HHhhCCCCC
Confidence 99843 45555554444444433321 12110 00 11122211100 0111 123334457
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
++.+++.+.+||..||..|++..+.+.|+||+
T Consensus 295 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~ 326 (383)
T 3eb0_A 295 PSLAIDLLEQILRYEPDLRINPYEAMAHPFFD 326 (383)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcCHHHH
Confidence 88999999999999999999999999999995
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-26 Score=226.16 Aligned_cols=269 Identities=14% Similarity=0.129 Sum_probs=159.8
Q ss_pred hhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 127 ~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
-|+.. +.||+|+||+||+|++..+|+.||||+++..... .. .+......+....|++++.+++.+.
T Consensus 7 ~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~---~~~~E~~~l~~l~h~~i~~~~~~~~---- 72 (303)
T 1zy4_A 7 DFEEI--AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-----LS---TILSEVMLLASLNHQYVVRYYAAWL---- 72 (303)
T ss_dssp HEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHH-----HH---HHHHHHHHHTTCCCTTBCCEEEEEE----
T ss_pred cchhh--heeccCCcEEEEEEEEcCCCeEEEEEEEeccHHH-----HH---HHHHHHHHHHhcCchHHHHHHHHHH----
Confidence 34444 7899999999999999889999999998643111 11 1111111111222444333222100
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQL 284 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~l 284 (487)
+...+..+.-.....+..++||||++|++|.++........+. ...+..++..++.+|
T Consensus 73 --------------------~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L 132 (303)
T 1zy4_A 73 --------------------ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132 (303)
T ss_dssp --------------------ECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------hhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHH
Confidence 0000000000001134568999999999999885533323333 334567888899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-------------HHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-------------FAIIGHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
|+.|++|+|+||+||+++.+|.++|+|||++..+..... ........+..+..||.+. ..+..
T Consensus 133 H~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~ 208 (303)
T 1zy4_A 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD----GTGHY 208 (303)
T ss_dssp HHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHT----SCSCC
T ss_pred HhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCccccc----CCCCC
Confidence 999999999999999999999999999999987753211 0111112223344444321 12356
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHh
Q 011399 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASY 431 (487)
Q Consensus 352 ~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~ 431 (487)
++++|+||+|+.+++++.+ +.... . ...+...+.......| |.
T Consensus 209 ~~~~Di~slG~il~~l~~p-----~~~~~--~-~~~~~~~~~~~~~~~~---------------------~~-------- 251 (303)
T 1zy4_A 209 NEKIDMYSLGIIFFEMIYP-----FSTGM--E-RVNILKKLRSVSIEFP---------------------PD-------- 251 (303)
T ss_dssp CTHHHHHHHHHHHHHHHSC-----CSSHH--H-HHHHHHHHHSTTCCCC---------------------TT--------
T ss_pred cchhhHHHHHHHHHHHHhc-----cCCch--h-HHHHHHhccccccccC---------------------cc--------
Confidence 7788999999999998862 11100 0 0011111111111111 11
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 432 PYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 432 p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
+....++.+++.+.+||..||..|++..+.+.|+||...
T Consensus 252 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 252 ------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp ------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred ------ccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 112345678899999999999999999999999999654
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-27 Score=237.65 Aligned_cols=255 Identities=16% Similarity=0.125 Sum_probs=158.9
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.. +.||+|+||.||+|+++.+|+.||||++........ .+
T Consensus 9 y~i~--~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~---- 50 (323)
T 3tki_A 9 WDLV--QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--------------------------------PE---- 50 (323)
T ss_dssp EEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------------------------------
T ss_pred ceee--eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccch--------------------------------HH----
Confidence 4444 789999999999999998999999999864421110 00
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~l 284 (487)
.+.+|+..+..+ .+++ +.+++ ....+..++||||++|++|.+..... .........+..++..+|.||
T Consensus 51 --~~~~E~~~l~~l-----~hpn--Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~L 121 (323)
T 3tki_A 51 --NIKKEICINKML-----NHEN--VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121 (323)
T ss_dssp --CHHHHHHHHHHC-----CCTT--BCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhC-----CCCC--CCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 122222222222 1222 22222 23345678999999999998874322 122334455667888999999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
|+.|++|||+||+|||++.+|.++|+|||++..+....... ......+..+..||.+. ...+.+.++|+||+|+.
T Consensus 122 H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DiwslG~i 197 (323)
T 3tki_A 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIV 197 (323)
T ss_dssp HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHH----CSSBCHHHHHHHHHHHH
T ss_pred HHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhc----cCCCCCCcccHHHHHHH
Confidence 99999999999999999999999999999997653221100 00001112233444331 12233557899999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++.. ++...+..... ... ..... ....| ....+
T Consensus 198 l~~ll~g~~--pf~~~~~~~~~--~~~-~~~~~---------------------~~~~~----------------~~~~~ 235 (323)
T 3tki_A 198 LTAMLAGEL--PWDQPSDSCQE--YSD-WKEKK---------------------TYLNP----------------WKKID 235 (323)
T ss_dssp HHHHHHSSC--SCSSSCTTSHH--HHH-HHTTC---------------------TTSTT----------------GGGSC
T ss_pred HHHHHhCCC--CCCCCchHHHH--HHH-Hhccc---------------------ccCCc----------------cccCC
Confidence 999998433 33222110000 000 00000 00000 12346
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 236 ~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 267 (323)
T 3tki_A 236 SAPLALLHKILVENPSARITIPDIKKDRWYNK 267 (323)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence 78889999999999999999999999999964
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-26 Score=228.97 Aligned_cols=255 Identities=16% Similarity=0.140 Sum_probs=155.4
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+.|... +.||+|+||.||+|+++.+|+.||||+++......
T Consensus 51 ~~~~y~~~--~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----------------------------------- 93 (349)
T 2w4o_A 51 LSDFFEVE--SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKK----------------------------------- 93 (349)
T ss_dssp GGGTEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------------------------------
T ss_pred ccCcEEEe--eEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHH-----------------------------------
Confidence 34445444 78999999999999999889999999987542110
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSL 281 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l 281 (487)
. +.+|...+.++ .++++.-..-+.......++||||++|++|.+..... ...+ ....+..++..+|
T Consensus 94 ~------~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L 161 (349)
T 2w4o_A 94 I------VRTEIGVLLRL-----SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAV 161 (349)
T ss_dssp -----------CHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHH
T ss_pred H------HHHHHHHHHhC-----CCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 0 11122222222 1222211111223345678999999999997764321 1233 3345567888899
Q ss_pred HHHHHCCccccCCCCCCeEEcC---CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 282 RQLLEYGYFHADPHPGNLLATP---EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~---~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
.|||+.|++|||+||+|||++. ++.++|+|||++......... .....+..+..|| ...-+..++++|+|
T Consensus 162 ~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE-----~~~~~~~~~~~Diw 234 (349)
T 2w4o_A 162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM--KTVCGTPGYCAPE-----ILRGCAYGPEVDMW 234 (349)
T ss_dssp HHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------------CGGGSCHH-----HHTTCCCCTHHHHH
T ss_pred HHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc--ccccCCCCccCHH-----HhcCCCCCcccchH
Confidence 9999999999999999999975 889999999999876543211 1111223344444 44444568889999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHH-HHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKT-IVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
|+|+.+++++++.. |+...+... +...+ .. .....+ .|
T Consensus 235 slG~il~ell~g~~--pf~~~~~~~~~~~~i---~~-~~~~~~--------------------~~--------------- 273 (349)
T 2w4o_A 235 SVGIITYILLCGFE--PFYDERGDQFMFRRI---LN-CEYYFI--------------------SP--------------- 273 (349)
T ss_dssp HHHHHHHHHHHSSC--TTCCTTCHHHHHHHH---HT-TCCCCC--------------------TT---------------
T ss_pred HHHHHHHHHHhCCC--CCCCCcccHHHHHHH---Hh-CCCccC--------------------Cc---------------
Confidence 99999999998532 332221111 11111 00 000000 00
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.....++.+++.+.+||..||+.|++..+.+.|+||.-
T Consensus 274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 311 (349)
T 2w4o_A 274 WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG 311 (349)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 11245788899999999999999999999999999954
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-27 Score=230.40 Aligned_cols=256 Identities=16% Similarity=0.186 Sum_probs=164.2
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+-|... +.||+|+||.||+|.++.+|+.||||+........ .+. +.
T Consensus 6 ~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~-----------------------------~~- 51 (284)
T 3kk8_A 6 DNYDVK--EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDF-----------------------------QK- 51 (284)
T ss_dssp TTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCH--HHH-----------------------------HH-
T ss_pred hhhhhh--hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCH--HHH-----------------------------HH-
Confidence 334444 77999999999999999899999999986432110 000 01
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSL 281 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l 281 (487)
+.+|+..+.++ .+++ +++++ ....+..++||||++|++|.+..... ...+ ....+..++..++
T Consensus 52 -----~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l 118 (284)
T 3kk8_A 52 -----LEREARICRKL-----QHPN--IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESI 118 (284)
T ss_dssp -----HHHHHHHHHHC-----CCTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHc-----CCCC--cCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 22233333322 1222 22222 23345568999999999997664332 2233 3344567788899
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCc---EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGK---LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~---i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
.|+|+.|++|+|+||+||+++.++. ++|+|||++......... .. ..+++..++++....+..+++.|+|
T Consensus 119 ~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~--~~-----~~~~~~y~aPE~~~~~~~~~~~Di~ 191 (284)
T 3kk8_A 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HG-----FAGTPGYLSPEVLKKDPYSKPVDIW 191 (284)
T ss_dssp HHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC--CC-----SCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred HHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc--cC-----CCCCcCCcCchhhcCCCCCcccchH
Confidence 9999999999999999999987665 999999999766533110 00 1122223333344444557789999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
|+|+.+++++++. .++...+.......+.. .....| .|.
T Consensus 192 slG~~l~~l~~g~--~pf~~~~~~~~~~~~~~----~~~~~~--------------------~~~--------------- 230 (284)
T 3kk8_A 192 ACGVILYILLVGY--PPFWDEDQHRLYAQIKA----GAYDYP--------------------SPE--------------- 230 (284)
T ss_dssp HHHHHHHHHHHSS--CSSCCSSHHHHHHHHHH----TCCCCC--------------------TTT---------------
T ss_pred HHHHHHHHHHHCC--CCCCCCchhHHHHHHHh----ccccCC--------------------chh---------------
Confidence 9999999999853 34433333322222211 011111 011
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
....++.+++.+.+||..||..|++..+.+.|+||.-.
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (284)
T 3kk8_A 231 WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 268 (284)
T ss_dssp TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred hcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence 12356888999999999999999999999999999543
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=231.66 Aligned_cols=262 Identities=17% Similarity=0.144 Sum_probs=163.0
Q ss_pred CCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 121 g~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
.....+.|... +.||+|+||+||+|++..+|+.||||++.........
T Consensus 49 ~~~~~~~y~~~--~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~------------------------------ 96 (348)
T 1u5q_A 49 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE------------------------------ 96 (348)
T ss_dssp CSCHHHHEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHH------------------------------
T ss_pred ccchhhheeee--eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchH------------------------------
Confidence 44566667766 7799999999999999889999999998654211100
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQ 278 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~ 278 (487)
..+. +.+|.+.+.++ .++++.-..-+....+..++||||++| ++.+.........+.. ..+..++.
T Consensus 97 ~~~~------~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~ 164 (348)
T 1u5q_A 97 KWQD------IIKEVRFLQKL-----RHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGAL 164 (348)
T ss_dssp HHHH------HHHHHHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HHHH------HHHHHHHHHhC-----CCCCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 0011 22222222222 122221111122234567899999986 5655544344444443 34557788
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
.+|.|||+.|++||||||+|||++.+|.++|+|||++..+..... .. .+..+..||.+.. ...+..++++|+|
T Consensus 165 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~--~~---gt~~y~aPE~~~~--~~~~~~~~~~Diw 237 (348)
T 1u5q_A 165 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS--FV---GTPYWMAPEVILA--MDEGQYDGKVDVW 237 (348)
T ss_dssp HHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC--CC---SCGGGCCHHHHHT--TSSCCBCTHHHHH
T ss_pred HHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc--cc---CCcceeCHhhhcc--ccCCCCCcHHHHH
Confidence 899999999999999999999999999999999999987654311 11 1222334443310 0134557789999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
|+|+.+++++++. .++...+....+..+. . ...|...
T Consensus 238 slG~il~ell~g~--~p~~~~~~~~~~~~~~---~-------------------------~~~~~~~------------- 274 (348)
T 1u5q_A 238 SLGITCIELAERK--PPLFNMNAMSALYHIA---Q-------------------------NESPALQ------------- 274 (348)
T ss_dssp HHHHHHHHHHHSS--CTTTTSCHHHHHHHHH---H-------------------------SCCCCCC-------------
T ss_pred HHHHHHHHHHhCC--CCCCCCChHHHHHHHH---h-------------------------cCCCCCC-------------
Confidence 9999999999843 3443333222221111 0 0111110
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
....++.+++.+.+||..||+.|++..+.+.|+||.-+
T Consensus 275 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 275 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 01235667778888888888888888888888887443
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-27 Score=249.97 Aligned_cols=268 Identities=15% Similarity=0.141 Sum_probs=167.6
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|... +.||+|+||.||+|+++.+|+.||||++.......-. ...-........
T Consensus 33 ~i~~~Y~~~--~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~--------------------~~~~~~~~~~~~ 90 (504)
T 3q5i_A 33 KIGESYFKV--RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGR--------------------YSDDNKNIEKFH 90 (504)
T ss_dssp CGGGTEEEE--EEEEC--CEEEEEEEETTTCCEEEEEEEEC------------------------------------CTH
T ss_pred CcccceEEE--eEecccCCeEEEEEEECCCCcEEEEEEEEhhhccccc--------------------ccccchhhHHHH
Confidence 345556655 7899999999999999989999999998754211100 000000000111
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQ 278 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~ 278 (487)
+. +.+|...+.++ ++++ |++++ .......++|||||+|++|.+.... ....+. ...+..++.
T Consensus 91 ~~------~~~E~~~l~~l-----~hpn--iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~ 156 (504)
T 3q5i_A 91 EE------IYNEISLLKSL-----DHPN--IIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN-RHKFDECDAANIMKQIL 156 (504)
T ss_dssp HH------HHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHhC-----CCCC--CCeEEEEEEcCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 12 22233322222 2333 22332 2334567899999999999776433 233443 445567888
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcCCC---cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATPEG---KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV 355 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~~g---~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (487)
.+|.|||+.|++|||+||+|||++.+| .++|+|||++..+...... .....+..+..||. .. +..++++
T Consensus 157 ~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~-----~~-~~~~~~~ 228 (504)
T 3q5i_A 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL--RDRLGTAYYIAPEV-----LK-KKYNEKC 228 (504)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCB--CCCCSCTTTCCHHH-----HT-TCBCTHH
T ss_pred HHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCcc--ccccCCcCCCCHHH-----hc-cCCCchH
Confidence 999999999999999999999999776 6999999999876543110 00111223344443 33 4457889
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHH
Q 011399 356 DVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFA 435 (487)
Q Consensus 356 Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~ 435 (487)
|+||+|+.+++++++. .|+...+...++..+.. ... .+..
T Consensus 229 DiwslG~il~~ll~g~--~pf~~~~~~~~~~~i~~----~~~-------------------------~~~~--------- 268 (504)
T 3q5i_A 229 DVWSCGVIMYILLCGY--PPFGGQNDQDIIKKVEK----GKY-------------------------YFDF--------- 268 (504)
T ss_dssp HHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHHH----CCC-------------------------CCCH---------
T ss_pred HHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHc----CCC-------------------------CCCc---------
Confidence 9999999999999853 45555554433332211 011 1110
Q ss_pred HHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 436 KRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 436 ~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
......++++++.+.+||..||..|++..+.+.|+||.-
T Consensus 269 -~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 307 (504)
T 3q5i_A 269 -NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307 (504)
T ss_dssp -HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred -cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence 011245788999999999999999999999999999953
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=223.88 Aligned_cols=279 Identities=18% Similarity=0.123 Sum_probs=167.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||++++....... .. +.+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------------~~------~~~ 58 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA--------------------------------LR------TLR 58 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHH--------------------------------HH------HHH
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHH--------------------------------HH------HHH
Confidence 7899999999999999889999999999754221110 01 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee-------cCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW-------DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~-------~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
|.+.+.++ .+++ +++++. ......++||||++| +|.+..............+..++..+|.|||+
T Consensus 59 E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~ 130 (353)
T 2b9h_A 59 EIKILKHF-----KHEN--IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130 (353)
T ss_dssp HHHHHHHC-----CCTT--BCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-----cCCC--cCCeeeeecccccCccceEEEEEeccCc-cHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 22222222 1122 222221 112557899999986 67666433222233344556788889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHH--HHHH--HhcCHHHHHHHHHH-cCCCCCCCCcchHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGH--VVHM--VNRDYEAMARDYYA-LDFLSPDVDVTPIV 361 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~-~g~~~~~~Di~sl~ 361 (487)
.|++|||+||+||+++.+|.++|+|||++..+........... .... ..+++..++++.+. .+..++++|+||+|
T Consensus 131 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG 210 (353)
T 2b9h_A 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG 210 (353)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHH
T ss_pred CCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHH
Confidence 9999999999999999999999999999998765422111100 0000 11222333333333 24567789999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCC------CChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHH
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFN------VPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFA 435 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~ 435 (487)
+.+++++++. .++...+.......+.......... ..+......+.+ ...|.-. .
T Consensus 211 ~il~~l~~g~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---------~ 271 (353)
T 2b9h_A 211 CILAELFLRR--PIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSL--------PMYPAAP---------L 271 (353)
T ss_dssp HHHHHHHHSS--CSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTS--------CCCCCCC---------H
T ss_pred HHHHHHHhCC--CCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcc--------cCCCCcc---------h
Confidence 9999999743 4566555544443333332211100 001110000000 0001100 1
Q ss_pred HHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccc
Q 011399 436 KRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEF 477 (487)
Q Consensus 436 ~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~ 477 (487)
..+....++.+++.+.+||..||..|++..+.+.|+||.--.
T Consensus 272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp HHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 123345789999999999999999999999999999996543
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-26 Score=243.01 Aligned_cols=257 Identities=14% Similarity=0.181 Sum_probs=165.1
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+.|... +.||+|+||.||+|+++.+|+.||||++...... .... .
T Consensus 20 ~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------------------~~~~--------~ 66 (486)
T 3mwu_A 20 FAERYNIV--CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-----------------------NKDT--------S 66 (486)
T ss_dssp HHHHEEEE--EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-----------------------CSCH--------H
T ss_pred hhcceEEe--EEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-----------------------chHH--------H
Confidence 34456555 7899999999999999989999999998632110 0000 0
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSL 281 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l 281 (487)
. +.+|...+.++ +++++.-..-+.......++||||++|++|.+..... ...+ ....+..++..++
T Consensus 67 ~------~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al 134 (486)
T 3mwu_A 67 T------ILREVELLKKL-----DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGI 134 (486)
T ss_dssp H------HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHH
T ss_pred H------HHHHHHHHHhC-----CCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 1 12222222222 1232211111223346678999999999997764332 2333 3445567888999
Q ss_pred HHHHHCCccccCCCCCCeEEc---CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 282 RQLLEYGYFHADPHPGNLLAT---PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~---~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
.|||+.||+||||||+|||++ .++.++|+|||++..+...... .....+..+..||.+ .|..++++|+|
T Consensus 135 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~------~~~~~~~~Diw 206 (486)
T 3mwu_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIAPEVL------RGTYDEKCDVW 206 (486)
T ss_dssp HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC------CCTTGGGGCCGGGG------GSCCCHHHHHH
T ss_pred HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc--CCCcCCCCCCCHHHh------CCCCCchhhHH
Confidence 999999999999999999995 4567999999999876543211 111122334444432 24457788999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
|+|+.+++++++. .|+...+...+...+... .+.+..|.
T Consensus 207 slG~il~~ll~g~--~pf~~~~~~~~~~~i~~~--~~~~~~~~------------------------------------- 245 (486)
T 3mwu_A 207 SAGVILYILLSGT--PPFYGKNEYDILKRVETG--KYAFDLPQ------------------------------------- 245 (486)
T ss_dssp HHHHHHHHHHHSS--CSSCCSSHHHHHHHHHHT--CCCSCSGG-------------------------------------
T ss_pred HHHHHHHHHHhCC--CCCCCCCHHHHHHHHHhC--CCCCCCcc-------------------------------------
Confidence 9999999999853 444444433333222110 00111110
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
....++++++.+.+||..||..|++..+.+.|+||.
T Consensus 246 ~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~ 281 (486)
T 3mwu_A 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281 (486)
T ss_dssp GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHH
T ss_pred cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhc
Confidence 123478889999999999999999999999999995
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=234.71 Aligned_cols=271 Identities=19% Similarity=0.215 Sum_probs=161.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||++........ .... +.+
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------~~~~------~~~ 90 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-------------------------------FAKR------AYR 90 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHH-------------------------------HHHH------HHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccccchh-------------------------------HHHH------HHH
Confidence 679999999999999998999999999875422110 0011 112
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecCC-----CCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDYT-----SGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~-----~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh 285 (487)
|+..+.++ . +++ +.+-.++.... ...++||||++| +|.+.. ....+ ....+..++..++.|||
T Consensus 91 E~~~l~~l----~-h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH 161 (371)
T 4exu_A 91 ELLLLKHM----Q-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM---GMEFSEEKIQYLVYQMLKGLKYIH 161 (371)
T ss_dssp HHHHHHHC----C-CTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHT---TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc----C-CCCchhhhhheeccCCcccceeEEEEEccccc-cHHHHh---hcCCCHHHHHHHHHHHHHHHHHHH
Confidence 22222221 1 111 11112221111 123899999985 554432 22233 33455678888999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcchHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDVDVTPIVPAL 364 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~Di~sl~~~l 364 (487)
+.|++|||+||+|||++.+|.++|+|||++........ +...+..+..||. ..- ...++++|+||+|+.+
T Consensus 162 ~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~----~~~~t~~y~aPE~-----~~~~~~~~~~~DiwslG~il 232 (371)
T 4exu_A 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT----GYVVTRWYRAPEV-----ILSWMHYNQTVDIWSVGCIM 232 (371)
T ss_dssp HTTCCCSCCCGGGEEECTTCCEEECSTTCC------------CTTCCCTTSCHHH-----HSCCSCCCTTHHHHHHHHHH
T ss_pred HCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcC----CcccCccccCHHH-----hcCCCCCCcHHhHHHHHHHH
Confidence 99999999999999999999999999999987654321 1111222334443 322 3567889999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhh--CCCCChHHhHhHHHHHHhccCC
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYA--DPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~l--dP~~~~~~~~~p~~~~~l~~~~ 442 (487)
++++++. .++...+....+..+...... .+..+...+..- ........+ .+.... ..+....
T Consensus 233 ~el~~g~--~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~ 296 (371)
T 4exu_A 233 AEMLTGK--TLFKGKDYLDQLTQILKVTGV----PGTEFVQKLNDK-AAKSYIQSLPQTPRKDF---------TQLFPRA 296 (371)
T ss_dssp HHHHHSS--CSCCCSSHHHHHHHHHHHHCC----CCHHHHTTCSCH-HHHHHHHHSCCCCCCCH---------HHHSTTS
T ss_pred HHHHhCC--CCCCCCChHHHHHHHHHHhCC----CcHHHHHHhhhh-hhhhhhhccCCCcchhH---------HHhcccc
Confidence 9999843 466666655544444333211 111111000000 000000011 111110 1223356
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
++.+++.+.+||..||..|++..+.+.|+||+-
T Consensus 297 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 329 (371)
T 4exu_A 297 SPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 329 (371)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred ChHHHHHHHHHCCCChhhcCCHHHHhcCccccc
Confidence 899999999999999999999999999999963
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-28 Score=251.39 Aligned_cols=247 Identities=17% Similarity=0.169 Sum_probs=160.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||++++..... .... .. +.+
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~----~~~~--------------------------~~------~~~ 65 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS----LDVV--------------------------GK------IRR 65 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH----TTTH--------------------------HH------HHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC----HHHH--------------------------HH------HHH
Confidence 78999999999999999899999999986421110 0000 01 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+..+ .+++ +.+++ ....+..++||||++|++|.++.... .........+..++..|+.|||+.|++
T Consensus 66 Ei~~l~~l-----~Hpn--Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv 138 (476)
T 2y94_A 66 EIQNLKLF-----RHPH--IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVV 138 (476)
T ss_dssp HHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHhC-----CCCC--CCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 22222211 1222 22222 23345679999999999998764321 112233445667888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~~ 369 (487)
||||||+|||++.+|.++|+|||++..+...... . ...+++..++++..... +.++++|+||+|+.++++++
T Consensus 139 HrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~--~-----~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt 211 (476)
T 2y94_A 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL--R-----TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC 211 (476)
T ss_dssp CSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB--C-----CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHEEEecCCCeEEEeccchhhccccccc--c-----ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhh
Confidence 9999999999999999999999999876543110 0 01122223333333322 34678999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .|+...+...+...+.. ..+.. | ...++.+++.
T Consensus 212 G~--~Pf~~~~~~~~~~~i~~----~~~~~----------------------p-----------------~~~s~~~~~L 246 (476)
T 2y94_A 212 GT--LPFDDDHVPTLFKKICD----GIFYT----------------------P-----------------QYLNPSVISL 246 (476)
T ss_dssp SS--CSSCCSSSHHHHHHHHT----TCCCC----------------------C-----------------TTCCHHHHHH
T ss_pred CC--CCCCCCCHHHHHHHHhc----CCcCC----------------------C-----------------ccCCHHHHHH
Confidence 43 34444333222222110 00000 1 1246788899
Q ss_pred HHHHHhhcCcccccccchhhcccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+||..||..|++..+.+.|+||.-
T Consensus 247 i~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred HHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 99999999999999999999999954
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-27 Score=230.39 Aligned_cols=257 Identities=18% Similarity=0.178 Sum_probs=162.1
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|... +.||+|+||+||+|++..+|+.||||+++.......
T Consensus 6 ~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------------------------------- 50 (304)
T 2jam_A 6 NIRKTFIFM--EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRD--------------------------------- 50 (304)
T ss_dssp CHHHHEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEECC--------------------------------------
T ss_pred chhccceee--eeccCCCCceEEEEEECCCCCEEEEEEEecccccch---------------------------------
Confidence 344555555 789999999999999988999999999875421100
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCS 280 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~ 280 (487)
.. +.+|...+.++ .++.+.-..-+.......++||||++|++|.+..... ...+ ....+..++..+
T Consensus 51 ~~------~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~ 118 (304)
T 2jam_A 51 SS------LENEIAVLKKI-----KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER-GVYTEKDASLVIQQVLSA 118 (304)
T ss_dssp -H------HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHhC-----CCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHc-CCCCHHHHHHHHHHHHHH
Confidence 00 11222222222 1222211111223346679999999999998764332 2333 334556778889
Q ss_pred HHHHHHCCccccCCCCCCeEE---cCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 281 LRQLLEYGYFHADPHPGNLLA---TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili---~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
+.++|+.|++|+|+||+||++ +.++.++|+|||++............+ +..+..||. ...+..++++|+
T Consensus 119 l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~---~~~y~aPE~-----~~~~~~~~~~Di 190 (304)
T 2jam_A 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACG---TPGYVAPEV-----LAQKPYSKAVDC 190 (304)
T ss_dssp HHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHS---CCCBCCTTT-----BSSCSCCHHHHH
T ss_pred HHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccC---CCCccChHH-----hccCCCCchhhH
Confidence 999999999999999999999 678899999999998765432211111 112222322 222333556789
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++++. .++...+...+...+.. .....+ + .
T Consensus 191 ~slG~il~~l~~g~--~pf~~~~~~~~~~~i~~----~~~~~~---------------------~--------------~ 229 (304)
T 2jam_A 191 WSIGVITYILLCGY--PPFYEETESKLFEKIKE----GYYEFE---------------------S--------------P 229 (304)
T ss_dssp HHHHHHHHHHHHSS--CTTTTSCHHHHHHHHHH----CCCCCC---------------------T--------------T
T ss_pred HHHHHHHHHHHHCC--CCCCCCCHHHHHHHHHc----CCCCCC---------------------c--------------c
Confidence 99999999888743 33333332222221111 000000 0 0
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.....++.+++.+.+||..||+.|++..+.+.|+||+-
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 230 FWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 11245788899999999999999999999999999954
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-27 Score=228.64 Aligned_cols=260 Identities=15% Similarity=0.180 Sum_probs=165.9
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|... +.||+|+||.||+|++..+|+.||||+++........ ..... +.
T Consensus 5 ~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-------------------~~~~~--------~~- 54 (283)
T 3bhy_A 5 DHYEMG--EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR-------------------RGVSR--------EE- 54 (283)
T ss_dssp HHEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS-------------------SSBCH--------HH-
T ss_pred hhhhhH--HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccc-------------------cchHH--------HH-
Confidence 345544 7899999999999999989999999998754211000 00000 01
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQ 283 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~ 283 (487)
+.+|+..+.++. ++++.-..-+....+..++||||++|++|.++... ....+ ....+..++..++.+
T Consensus 55 -----~~~E~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~ 123 (283)
T 3bhy_A 55 -----IEREVNILREIR-----HPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVHY 123 (283)
T ss_dssp -----HHHHHHHHHHCC-----CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhCC-----CCCeeehhheecCCCeEEEEEeecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Confidence 222333333221 22221111122334567999999999999887543 22334 344556778889999
Q ss_pred HHHCCccccCCCCCCeEEcCCC----cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 284 LLEYGYFHADPHPGNLLATPEG----KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g----~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
+|+.|++|+|+||+||+++.++ .++|+|||++..+...... .. ..+.+..++++....+..+++.|+||
T Consensus 124 lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~-----~~~~~~y~aPE~~~~~~~~~~~Di~s 196 (283)
T 3bhy_A 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KN-----IFGTPEFVAPEIVNYEPLGLEADMWS 196 (283)
T ss_dssp HHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---------------CCCGGGCCHHHHTTCCCCTHHHHHH
T ss_pred HHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcc--cc-----cCCCcCccCcceecCCCCCcchhhhh
Confidence 9999999999999999999877 8999999999887654221 11 12233333444444556678899999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+|+.+++++++. .++...+.......+. ......++ ...
T Consensus 197 lG~il~~l~~g~--~p~~~~~~~~~~~~~~----~~~~~~~~-----------------------------------~~~ 235 (283)
T 3bhy_A 197 IGVITYILLSGA--SPFLGETKQETLTNIS----AVNYDFDE-----------------------------------EYF 235 (283)
T ss_dssp HHHHHHHHHHSS--CTTCCSSHHHHHHHHH----TTCCCCCH-----------------------------------HHH
T ss_pred HHHHHHHHHHCC--CCCCCcchHHHHHHhH----hcccCCcc-----------------------------------hhc
Confidence 999999999843 3444433322221111 11111111 111
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
...++.+++.+.+||..||+.|++..+.+.|+||.
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~ 270 (283)
T 3bhy_A 236 SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270 (283)
T ss_dssp TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHH
T ss_pred ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHH
Confidence 24577889999999999999999999999999985
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=8.9e-26 Score=228.08 Aligned_cols=290 Identities=16% Similarity=0.168 Sum_probs=172.9
Q ss_pred hhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 127 ~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
.|... +.||+|+||.||+|++..+|+.||||++.+....... ..
T Consensus 28 ~y~~~--~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------------~~-- 71 (364)
T 3qyz_A 28 RYTNL--SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--------------------------------QR-- 71 (364)
T ss_dssp TEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHH--------------------------------HH--
T ss_pred cEEEE--EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHH--------------------------------HH--
Confidence 34444 7899999999999999989999999999754221100 01
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCe-Eeceeeec----CCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDV-LVPDIFWD----YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSL 281 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~----~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l 281 (487)
+.+|++.+.++. ++++ .+-.++.. .....++||||++| +|.++.............+..++..+|
T Consensus 72 ----~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~~~~~~~~~~~i~~qi~~aL 141 (364)
T 3qyz_A 72 ----TLREIKILLRFR-----HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGL 141 (364)
T ss_dssp ----HHHHHHHHHHCC-----CTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhcC-----CCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 122222222221 1111 11111111 12356899999986 776664332222333445567888999
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
.|||+.|++|||+||+||+++.+|.++|+|||++.......... ......+..+..||.+ ......++++|+||
T Consensus 142 ~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~~Diws 217 (364)
T 3qyz_A 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM----LNSKGYTKSIDIWS 217 (364)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHH----HTBCSCSTHHHHHH
T ss_pred HHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHh----cCCCCCCcchhHHH
Confidence 99999999999999999999999999999999998776442100 0001112234445543 22333578899999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+|+.+++++++. .++...+....+..+...+. ..+........... .......+ |.... .|+ ..+.
T Consensus 218 lG~il~ell~g~--~pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~-~~~~~~~~-~~~~~----~~~--~~~~ 283 (364)
T 3qyz_A 218 VGCILAEMLSNR--PIFPGKHYLDQLNHILGILG----SPSQEDLNCIINLK-ARNYLLSL-PHKNK----VPW--NRLF 283 (364)
T ss_dssp HHHHHHHHHHSS--CSSCCSSGGGHHHHHHHHHC----SCCHHHHHTCCCHH-HHHHHHTS-CCCCC----CCH--HHHC
T ss_pred HHHHHHHHHHCC--CCCCCCChHHHHHHHHHHhC----CCCHHHHHHhhhhh-HHHHHHhc-CCccC----CCH--HHhC
Confidence 999999999853 44544443333333332221 11111100000000 00000011 11000 011 2233
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccccccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVC 480 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~ 480 (487)
...++++++.+.+||..||+.|++..+.+.|+||.--+.+.
T Consensus 284 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~ 324 (364)
T 3qyz_A 284 PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS 324 (364)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccCcc
Confidence 45789999999999999999999999999999997654443
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=227.56 Aligned_cols=264 Identities=18% Similarity=0.158 Sum_probs=166.9
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
...+.|+.. +.||+|+||.||+|++..+|+.||+|+.........
T Consensus 16 ~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------------------------- 60 (302)
T 2j7t_A 16 DPNEVWEIV--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--------------------------------- 60 (302)
T ss_dssp CGGGTEEEE--EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCH---------------------------------
T ss_pred CCccceeec--ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHH---------------------------------
Confidence 455666666 679999999999999998899999999864321110
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCS 280 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~ 280 (487)
+ ++..|...+.++ .++++.-..-+....+..++||||++|++|.++......+.+.. ..+..++..+
T Consensus 61 ~------~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 129 (302)
T 2j7t_A 61 E------DYIVEIEILATC-----DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129 (302)
T ss_dssp H------HHHHHHHHHHHC-----CCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred H------HHHHHHHHHhcC-----CCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence 0 012222222222 12222111112223466799999999999988755444445544 3455778889
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
+.|+|+.|++|+|+||+||+++.+|.++|+|||++........ .......+..+..||.+.......+..+.++|+||+
T Consensus 130 l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 208 (302)
T 2j7t_A 130 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ-KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 208 (302)
T ss_dssp HHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHH
T ss_pred HHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-ccccccCChhhcCCeeeccccCCCCCCchhhhHHHH
Confidence 9999999999999999999999999999999998653221110 001111223455666554333234456778999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
|+.+++++++. .++...+.......+. . ...|.... ..
T Consensus 209 G~il~~l~~g~--~p~~~~~~~~~~~~~~---~-------------------------~~~~~~~~------------~~ 246 (302)
T 2j7t_A 209 GITLIEMAQIE--PPHHELNPMRVLLKIA---K-------------------------SDPPTLLT------------PS 246 (302)
T ss_dssp HHHHHHHHHSS--CTTTTSCHHHHHHHHH---H-------------------------SCCCCCSS------------GG
T ss_pred HHHHHHHhcCC--CCCccCCHHHHHHHHh---c-------------------------cCCcccCC------------cc
Confidence 99999998743 3444333322221111 0 00111000 01
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
..++.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 281 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence 23677889999999999999999999999999963
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-26 Score=229.73 Aligned_cols=296 Identities=18% Similarity=0.171 Sum_probs=168.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+. +|+.||||+++....... ..+... .....+. +.+
T Consensus 28 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~---------------------~~~~~~-~~~~~~~------~~~ 78 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGR---------------------TVNILS-DSFLCKR------VLR 78 (362)
T ss_dssp EEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTS---------------------CEEGGG-SHHHHHH------HHH
T ss_pred EEeccCCCEEEEEEECC-CCCeEEEEeccccCCccc---------------------hhhhhh-hhhHHHH------HHH
Confidence 78999999999999987 699999999864321100 000000 0001111 223
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeec----CCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWD----YTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~----~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~ 286 (487)
|++.+.++. +++ +.+-.++.. .....++||||++| ++.+.........+. ...+..++..+|.|||+
T Consensus 79 E~~~l~~l~-----h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 152 (362)
T 3pg1_A 79 EIRLLNHFH-----HPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE 152 (362)
T ss_dssp HHHHHHHCC-----CTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCC-----CcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333333321 222 222222221 12346899999986 555543322223443 34456778889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.|++|+|+||+||+++.+|.++|+|||++......... .....+..+..||.+. ..+..++++|+||+|+.+++
T Consensus 153 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~~ 226 (362)
T 3pg1_A 153 AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK--THYVTHRWYRAPELVM----QFKGFTKLVDMWSAGCVMAE 226 (362)
T ss_dssp TTCCCCCCCGGGEEECTTCCEEECCTTC-----------------CGGGCCHHHHT----TCTTCCTHHHHHHHHHHHHH
T ss_pred CcCEecCCChHHEEEcCCCCEEEEecCccccccccccc--ceecccceecCcHHhc----CCCCCCcHhHHHhHHHHHHH
Confidence 99999999999999999999999999999865443221 1112223345555432 12446788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++. .++...+.......+...... ....... ....-...+-+.... .... ..+ ........++.+
T Consensus 227 l~~g~--~pf~~~~~~~~~~~i~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~-~~~~----~~~--~~~~~~~~~~~~ 293 (362)
T 3pg1_A 227 MFNRK--ALFRGSTFYNQLNKIVEVVGT---PKIEDVV-MFSSPSARDYLRNSL-SNVP----ARA--WTAVVPTADPVA 293 (362)
T ss_dssp HHHSS--CSCCCSSHHHHHHHHHHHHCC---CCHHHHH-HTSCHHHHHHTTTCC-CCCC----CCC--HHHHSTTSCHHH
T ss_pred HHhCC--CCCCCCCHHHHHHHHHHHcCC---CChHHhh-hccchhhhHHHHhhc-ccCC----hhh--HHhhCCCCCHHH
Confidence 99843 455555555444444333221 1011100 000000000000000 0000 000 112334568899
Q ss_pred HHHHHHHHhhcCcccccccchhhcccccccccccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCDIS 483 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~~ 483 (487)
++.+.+||..||..|++..+.+.|+||.--+.+.|..
T Consensus 294 ~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~ 330 (362)
T 3pg1_A 294 LDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLT 330 (362)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGGGT
T ss_pred HHHHHHHhcCChhhCCCHHHHHcCchhhhccCccccc
Confidence 9999999999999999999999999998777666653
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-28 Score=245.22 Aligned_cols=246 Identities=15% Similarity=0.119 Sum_probs=153.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||++......... .... +.+
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~------------------------------~~~~------~~~ 58 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSD------------------------------MHMR------VER 58 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTT------------------------------CSHH------HHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchh------------------------------HHHH------HHH
Confidence 7899999999999999889999999998632111000 0001 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|...+..+ .+++ +++++ ....+..++||||+ +++|.+..... .........+..++..++.|||+.|++
T Consensus 59 E~~~l~~l-----~hpn--Iv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv 130 (336)
T 3h4j_B 59 EISYLKLL-----RHPH--IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIV 130 (336)
T ss_dssp HHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhC-----CCCC--CCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 22222211 1222 22222 23345679999999 55766653322 222334455667888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~ 368 (487)
|||+||+|||++.+|.++|+|||++........ ...++ +..+..||. +... +.++++|+||+|+.+++++
T Consensus 131 H~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~g---t~~y~aPE~-----~~~~~~~~~~~DiwslG~il~~ll 202 (336)
T 3h4j_B 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEV-----INGKLYAGPEVDVWSCGIVLYVML 202 (336)
T ss_dssp CCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTT---STTTSCGGG-----SCCSGGGCHHHHHHHHHHHHHHHH
T ss_pred ecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccC---CcCcCCHHH-----HcCCCCCCCccchhHHHHHHHHHH
Confidence 999999999999999999999999987654321 11111 122223332 2111 2256789999999999998
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
++. .|+...+...+. . .+ ....+. .....++.+++
T Consensus 203 ~g~--~Pf~~~~~~~~~-------~----~i--------------------~~~~~~------------~p~~~s~~~~~ 237 (336)
T 3h4j_B 203 VGR--LPFDDEFIPNLF-------K----KV--------------------NSCVYV------------MPDFLSPGAQS 237 (336)
T ss_dssp HSS--CSSBCSSSTTCB-------C----CC--------------------CSSCCC------------CCTTSCHHHHH
T ss_pred hCC--CCCCCccHHHHH-------H----HH--------------------HcCCCC------------CcccCCHHHHH
Confidence 743 233322110000 0 00 000000 01235788899
Q ss_pred HHHHHHhhcCcccccccchhhccccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.+.+||..||..|++..+.+.|+||...
T Consensus 238 li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 238 LIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 9999999999999999999999999643
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-27 Score=229.54 Aligned_cols=254 Identities=16% Similarity=0.181 Sum_probs=167.0
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+.|... +.||+|+||+||+|+++.++..||+|++.+...... +
T Consensus 7 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~---------------------------------~ 51 (277)
T 3f3z_A 7 INQYYTLE--NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV---------------------------------D 51 (277)
T ss_dssp HHHHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCH---------------------------------H
T ss_pred hhhhEEee--eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchH---------------------------------H
Confidence 44555555 789999999999999998899999999864321110 0
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQC 279 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~ 279 (487)
. +.+|+..+.++ .+++ +++++ .......++||||++|++|.+..... ...+. ...+..++..
T Consensus 52 ~------~~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~ 117 (277)
T 3f3z_A 52 R------FKQEIEIMKSL-----DHPN--IIRLYETFEDNTDIYLVMELCTGGELFERVVHK-RVFRESDAARIMKDVLS 117 (277)
T ss_dssp H------HHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHH
T ss_pred H------HHHHHHHHHhC-----CCCC--EeeEEEEEecCCeEEEEEeccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 0 11222222222 1222 22222 23345678999999999998764432 22333 4455678888
Q ss_pred HHHHHHHCCccccCCCCCCeEE---cCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLA---TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili---~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
++.++|+.|++|+|+||+||++ +.++.++|+|||++..+...... .....+..+..||.+ .+..++++|
T Consensus 118 ~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~t~~y~aPE~~------~~~~~~~~D 189 (277)
T 3f3z_A 118 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM--RTKVGTPYYVSPQVL------EGLYGPECD 189 (277)
T ss_dssp HHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB--CCCCSCTTTCCHHHH------TTCBCTTHH
T ss_pred HHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch--hccCCCCCccChHHh------cccCCchhh
Confidence 9999999999999999999999 78899999999999876533110 000111223445432 345688999
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .++...+.......+. ......|..
T Consensus 190 i~slG~~l~~l~~g~--~p~~~~~~~~~~~~~~----~~~~~~~~~---------------------------------- 229 (277)
T 3f3z_A 190 EWSAGVMMYVLLCGY--PPFSAPTDSEVMLKIR----EGTFTFPEK---------------------------------- 229 (277)
T ss_dssp HHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHH----HCCCCCCHH----------------------------------
T ss_pred ehhHHHHHHHHHHCC--CCCCCCCHHHHHHHHH----hCCCCCCch----------------------------------
Confidence 999999999999843 3444444333222221 111111111
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.....++.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 230 -~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 267 (277)
T 3f3z_A 230 -DWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267 (277)
T ss_dssp -HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred -hhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 11245788999999999999999999999999999954
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.7e-26 Score=227.40 Aligned_cols=273 Identities=20% Similarity=0.238 Sum_probs=162.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||++........ .... +.+
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------~~~~------~~~ 72 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-------------------------------FAKR------AYR 72 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHH-------------------------------HHHH------HHH
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccchH-------------------------------HHHH------HHH
Confidence 789999999999999988999999999865321110 0011 112
Q ss_pred HHHHHHHHHHHhCCCCCe-EeceeeecCC-----CCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWDYT-----SGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~-----~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
|...+.++ . ++++ .+-.++.... ...++||||++| +|.+.... .........+..++..+|.|||++
T Consensus 73 E~~~l~~l----~-h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~i~~qi~~al~~LH~~ 145 (353)
T 3coi_A 73 ELLLLKHM----Q-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSA 145 (353)
T ss_dssp HHHHHHHC----C-CTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTTS-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhc----C-CCCcccHhheEecccccccceeEEEEeccccC-CHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22222221 1 1111 1111111111 234899999986 66655321 122233445567888899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.+|.++|+|||++........ ....+..+..||.+. ..+..+.++|+||+|+.++++
T Consensus 146 ~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----~~~~t~~y~aPE~~~----~~~~~~~~~Di~slG~il~el 217 (353)
T 3coi_A 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT----GYVVTRWYRAPEVIL----SWMHYNQTVDIWSVGCIMAEM 217 (353)
T ss_dssp TCCCSSCCGGGEEECTTCCEEECSTTCTTC------------CCSBCCSCHHHHS----CCSCCCTTHHHHHHHHHHHHH
T ss_pred CcccCCCCHHHEeECCCCcEEEeecccccCCCCCcc----ccccCcCcCCHHHHh----CcCCCCchhhHHHHHHHHHHH
Confidence 999999999999999999999999999987654321 111122334444331 123557889999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHH---HHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILR---SLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r---~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
+++. .++...+....+..+...... .|..+..-+. ....+..+.....+.+ ..+....++
T Consensus 218 ~~g~--~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 280 (353)
T 3coi_A 218 LTGK--TLFKGKDYLDQLTQILKVTGV----PGTEFVQKLNDKAAKSYIQSLPQTPRKDF-----------TQLFPRASP 280 (353)
T ss_dssp HHSS--CSSBSSCHHHHHHHHHHHHCB----CCHHHHTTCSCHHHHHHHHTSCBCSSCCT-----------TTTCTTSCH
T ss_pred HhCC--CCCCCCCHHHHHHHHHHHhCC----CCHHHHHHHhhHHHHHHHHhCcCCCCccH-----------HHhcCCcCH
Confidence 9843 456555554444443332211 1111110000 0000011100001111 112234688
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 281 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 311 (353)
T 3coi_A 281 QAADLLEKMLELDVDKRLTAAQALTHPFFEP 311 (353)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred HHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 9999999999999999999999999999963
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-26 Score=231.37 Aligned_cols=275 Identities=17% Similarity=0.169 Sum_probs=164.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++..... .... ..
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------------------------------~~~~------~~ 99 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF----------------------------------LNQA------QI 99 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSHHH----------------------------------HHHH------HH
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHH----------------------------------HHHH------HH
Confidence 6899999999999999989999999999754110 0111 11
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh-cCCC--HHHHHHHHHHHHHHHHH--H
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES-QGLK--VLDLVNTGIQCSLRQLL--E 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~--~~~~~~~~i~~~l~~lh--~ 286 (487)
|.+.+..+.+. ......++..++ .......++||||++| +|.++..... .+.+ ....+..++..++.|+| .
T Consensus 100 e~~~l~~l~~~-~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 177 (382)
T 2vx3_A 100 EVRLLELMNKH-DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 177 (382)
T ss_dssp HHHHHHHHHHC-SSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHhc-ccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 22222222211 000011122222 2234667899999976 7777644332 2233 34556678888999999 5
Q ss_pred CCccccCCCCCCeEEc--CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 287 YGYFHADPHPGNLLAT--PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 287 ~givH~Dlkp~Nili~--~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
.||+||||||+|||++ .++.+||+|||++..+..... ....+..+..||. ..-+-.++++|+||+|+.+
T Consensus 178 ~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~----~~~~t~~y~aPE~-----~~~~~~~~~~DiwSlG~il 248 (382)
T 2vx3_A 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY----QYIQSRFYRSPEV-----LLGMPYDLAIDMWSLGCIL 248 (382)
T ss_dssp TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCC----SSCSCGGGCCHHH-----HTTCCCCTHHHHHHHHHHH
T ss_pred CCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccc----cccCCccccChHH-----HcCCCCCcHHHHHHHHHHH
Confidence 7999999999999995 467899999999987643211 0111223444544 3334457889999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChH-HHHH---HHHHHHHHHhh--------------hhhCCCCCh
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAY-YALI---LRSLTVLEGLA--------------LYADPNFKV 426 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~-~~~l---~r~l~~leg~~--------------~~ldP~~~~ 426 (487)
++++++. .++...+....+..+.... +.|+. +... .+.+ .+.+. ....|....
T Consensus 249 ~elltg~--~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (382)
T 2vx3_A 249 VEMHTGE--PLFSGANEVDQMNKIVEVL-----GIPPAHILDQAPKARKF--FEKLPDGTWNLKKTKDGKREYKPPGTRK 319 (382)
T ss_dssp HHHHHSS--CSSCCSSHHHHHHHHHHHH-----CSCCHHHHTTCTTHHHH--EEECTTSCEEECCCCTTCCCSCCTTCSC
T ss_pred HHHHhCC--CCCCCCCHHHHHHHHHHHh-----CCCCHHHHHhhHHHHHH--HHhccccccccccccccccccCCcchhh
Confidence 9999853 5666555544444443332 12221 1100 0000 00000 000011110
Q ss_pred HHhHhHHHHHHhccC-----------------CCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 427 LAASYPYFAKRLLTD-----------------PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 427 ~~~~~p~~~~~l~~~-----------------~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+...+... .++.+++.+.+||..||++|++..+.+.|+||.-
T Consensus 320 -------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~ 378 (382)
T 2vx3_A 320 -------LHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378 (382)
T ss_dssp -------HHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC
T ss_pred -------HHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCccccc
Confidence 01111000 0147899999999999999999999999999964
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-26 Score=231.47 Aligned_cols=251 Identities=14% Similarity=0.157 Sum_probs=155.9
Q ss_pred cccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|+.. .+|+.||||+++...... ...... .
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~--------------~ 104 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ---------------------KAKTTE--------------H 104 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE---------------------EESSGG--------------G
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh---------------------hhhHHH--------------H
Confidence 77999999999999984 479999999986421000 000000 0
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~g 288 (487)
+..|...+.++. +++.+....-+.......++||||++|++|.++.... ...+ ....+..++..+|.|||+.|
T Consensus 105 ~~~E~~~l~~l~----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ 179 (355)
T 1vzo_A 105 TRTERQVLEHIR----QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLG 179 (355)
T ss_dssp CCCHHHHHHHHH----TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcc----CCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 111222222222 2233222222223345678999999999998875432 2333 34445577888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcchHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL--DFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~Di~sl~~~l~~ 366 (487)
++||||||+|||++.+|.++|+|||+++.+.............+..+..||. ... ...++++|+||+|+.+++
T Consensus 180 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~~~~~~~DvwslG~il~e 254 (355)
T 1vzo_A 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI-----VRGGDSGHDKAVDWWSLGVLMYE 254 (355)
T ss_dssp CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHH-----HTTCC---CTHHHHHHHHHHHHH
T ss_pred cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhh-----hcCCCCCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999998765432211111111223334443 322 224677899999999999
Q ss_pred HHHHhccCCCCcC----cHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 367 FFDDALNSSVSEL----NFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 367 ~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
++++.. ++... ....+. +.. ....|.+ ....
T Consensus 255 ll~g~~--pf~~~~~~~~~~~~~----------------------~~~-------~~~~~~~--------------~~~~ 289 (355)
T 1vzo_A 255 LLTGAS--PFTVDGEKNSQAEIS----------------------RRI-------LKSEPPY--------------PQEM 289 (355)
T ss_dssp HHHSSC--TTSCTTSCCCHHHHH----------------------HHH-------HHCCCCC--------------CTTS
T ss_pred HHHCCC--CCccCCccchHHHHH----------------------HHH-------hccCCCC--------------Cccc
Confidence 998532 32211 111111 111 0011111 1234
Q ss_pred CHHHHHHHHHHHhhcCcccc-----cccchhhccccc
Q 011399 443 NPYLRDALVELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
++.+++.+.+||..||+.|+ +..+.+.|+||.
T Consensus 290 ~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~ 326 (355)
T 1vzo_A 290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 326 (355)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchh
Confidence 67788899999999999999 777888999985
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-27 Score=226.78 Aligned_cols=252 Identities=16% Similarity=0.119 Sum_probs=146.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+.+....... ....+......
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~------------------------------- 59 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDIS------------------------------- 59 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHH--HHHHHHHHHHH-------------------------------
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHH--HHHHHHHHHHH-------------------------------
Confidence 789999999999999988999999999875422110 00001110000
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHH---HhcCCCHH--HHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAI---ESQGLKVL--DLVNTGIQCSLRQLLE 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~---~~~~~~~~--~~~~~~i~~~l~~lh~ 286 (487)
... ..+++ +++++ ....+..++||||++| +|.+.... .....+.. ..+..++..++.|||+
T Consensus 60 --------~~~-~~h~~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 127 (290)
T 3fme_A 60 --------MRT-VDCPF--TVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127 (290)
T ss_dssp --------HTT-CCCTT--BCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------HHh-CCCCe--EEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 000 12222 22222 2334667999999986 66554332 12234443 3456788889999999
Q ss_pred C-CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 287 Y-GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~-givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
. |++|+|+||+||+++.++.++|+|||++..+........ ...+..+..||.+... ...+..++++|+||+|+.++
T Consensus 128 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~t~~y~aPE~~~~~-~~~~~~~~~~Di~slG~il~ 204 (290)
T 3fme_A 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI--DAGCKPYMAPERINPE-LNQKGYSVKSDIWSLGITMI 204 (290)
T ss_dssp HSCCCCCCCSGGGCEECTTCCEEBCCC-----------------CCCCCCSCHHHHSCC-TTC--CCHHHHHHHHHHHHH
T ss_pred cCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccccc--cCCCccccChhhcChh-hcCcCCCcHHHHHHHHHHHH
Confidence 8 999999999999999999999999999987755422111 0111223334432100 12223466789999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++. .|+...... ...+..... ...|... ....+++
T Consensus 205 ~l~~g~--~p~~~~~~~--~~~~~~~~~-------------------------~~~~~~~-------------~~~~~~~ 242 (290)
T 3fme_A 205 ELAILR--FPYDSWGTP--FQQLKQVVE-------------------------EPSPQLP-------------ADKFSAE 242 (290)
T ss_dssp HHHHTS--CSSCCCSCH--HHHHHHHHH-------------------------SCCCCCC-------------TTTSCHH
T ss_pred HHHHCC--CCccccCch--HHHHHHHhc-------------------------cCCCCcc-------------cccCCHH
Confidence 998754 333321110 000110000 0111110 0134678
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+++.+.+||..||+.|++..+.+.|+||..
T Consensus 243 ~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~ 272 (290)
T 3fme_A 243 FVDFTSQCLKKNSKERPTYPELMQHPFFTL 272 (290)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence 899999999999999999999999999954
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-26 Score=230.79 Aligned_cols=255 Identities=15% Similarity=0.177 Sum_probs=162.2
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|... +.||+|+||.||+|+++.+|+.||||++....... ..+++++
T Consensus 19 ~~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~E~~~l-------------------------- 69 (342)
T 2qr7_A 19 QFTDGYEVK--EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP-TEEIEIL-------------------------- 69 (342)
T ss_dssp CHHHHEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCC-HHHHHHH--------------------------
T ss_pred CccccEEEE--EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCCh-HHHHHHH--------------------------
Confidence 455556665 78999999999999999899999999987542111 1111111
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSL 281 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l 281 (487)
.++ ..++++.-..-+.+.....++||||++|++|.+..... .........+..++..++
T Consensus 70 ----------------~~~----~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al 129 (342)
T 2qr7_A 70 ----------------LRY----GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTV 129 (342)
T ss_dssp ----------------HHH----TTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHH
T ss_pred ----------------HHh----cCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 111 12222211111223345678999999999998764321 122233445667888999
Q ss_pred HHHHHCCccccCCCCCCeEEcCC-C---cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 282 RQLLEYGYFHADPHPGNLLATPE-G---KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~-g---~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
.|||+.|++|||+||+|||+..+ | .++|+|||++..+...... ......+..+..||.+...-+ ++++|+
T Consensus 130 ~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~-----~~~~Di 203 (342)
T 2qr7_A 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LMTPCYTANFVAPEVLERQGY-----DAACDI 203 (342)
T ss_dssp HHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC-BCCSSCCSSCCCHHHHHHHHH-----HHHHHH
T ss_pred HHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc-eeccCCCccccCHHHhcCCCC-----CCccCe
Confidence 99999999999999999998543 3 5999999999866432100 000011223445665543333 557899
Q ss_pred chHHHHHHHHHHHhccCCCCc---CcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSE---LNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYF 434 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~ 434 (487)
||+|+.+++++++.. |+.. .+...+...+.. ..+..++
T Consensus 204 wslG~il~ell~g~~--Pf~~~~~~~~~~~~~~i~~----~~~~~~~--------------------------------- 244 (342)
T 2qr7_A 204 WSLGVLLYTMLTGYT--PFANGPDDTPEEILARIGS----GKFSLSG--------------------------------- 244 (342)
T ss_dssp HHHHHHHHHHHHSSC--SSCSSTTSCHHHHHHHHHH----CCCCCCS---------------------------------
T ss_pred eeHhHHHHHHhcCCC--CCCCCCcCCHHHHHHHHcc----CCcccCc---------------------------------
Confidence 999999999998543 3322 122222222211 0111100
Q ss_pred HHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 435 AKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 435 ~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
......++.+++.+.+||..||..|++..+.+.|+||
T Consensus 245 --~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~ 281 (342)
T 2qr7_A 245 --GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281 (342)
T ss_dssp --TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred --cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence 0112457889999999999999999999999999999
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-26 Score=227.50 Aligned_cols=251 Identities=17% Similarity=0.154 Sum_probs=146.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++...... +.+..... ...|+++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------~e~~~~~~---~~~h~~i------------------- 84 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR--------QEVDHHWQ---ASGGPHI------------------- 84 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHH--------HHHHHHHH---HTTSTTB-------------------
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHH--------HHHHHHHH---hcCCCCh-------------------
Confidence 46999999999999999899999999987542110 00000000 0012221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC---CCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY---TSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
+.+-.++... ....++||||++|++|.++..... ...+. ...+..++..+|.|||+.
T Consensus 85 -----------------~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~ 147 (336)
T 3fhr_A 85 -----------------VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 147 (336)
T ss_dssp -----------------CCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------HHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1222222221 223689999999999988754322 12343 345567788899999999
Q ss_pred CccccCCCCCCeEEcCC---CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 288 GYFHADPHPGNLLATPE---GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 288 givH~Dlkp~Nili~~~---g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
|++||||||+||+++.+ +.++|+|||++............++ ..+..||.+ ..+..++++|+||+|+.+
T Consensus 148 ~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t---~~y~aPE~~-----~~~~~~~~~Di~slG~il 219 (336)
T 3fhr_A 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT---PYYVAPEVL-----GPEKYDKSCDMWSLGVIM 219 (336)
T ss_dssp TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------------------------------CHHHHHHHHHHHHHHH
T ss_pred CeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCC---cCccChhhh-----CCCCCCchhhHHHHHHHH
Confidence 99999999999999864 4599999999987765433333332 222233332 222235678999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++++++. .++...+.............. + ....|. ......++
T Consensus 220 ~~l~~g~--~pf~~~~~~~~~~~~~~~~~~--------------------~--~~~~~~-------------~~~~~~~~ 262 (336)
T 3fhr_A 220 YILLCGF--PPFYSNTGQAISPGMKRRIRL--------------------G--QYGFPN-------------PEWSEVSE 262 (336)
T ss_dssp HHHHHSS--CCC-------------------------------------------CCCT-------------TTSTTCCH
T ss_pred HHHHHCC--CCCCCccchhhhhhHHHhhhc--------------------c--ccccCc-------------hhhccCCH
Confidence 9999843 233222111110000000000 0 000000 01124578
Q ss_pred HHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.+++.+.+||..||..|++..+.+.|+||.-.
T Consensus 263 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 263 DAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 89999999999999999999999999999543
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-26 Score=227.60 Aligned_cols=192 Identities=16% Similarity=0.119 Sum_probs=126.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||+|++........ +. +.+
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~---------------------------------~~------~~~ 56 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ---------------------------------RT------FLK 56 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHH---------------------------------HH------HHH
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHH---------------------------------HH------HHH
Confidence 789999999999999998999999998864322110 01 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++ .+++ +++++ .......++||||++|++|.++........+. ...+..++..+|.|||+.|+
T Consensus 57 E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i 129 (310)
T 3s95_A 57 EVKVMRCL-----EHPN--VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129 (310)
T ss_dssp HHHHHTTC-----CCTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhC-----CCcC--cccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 22222222 1222 22222 12245678999999999999885543333443 33456788889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHH--HHH------HHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII--GHV------VHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
+|+|+||+||+++.+|.++|+|||++..+......... ... .....+++..++++....+..++++|+||+|
T Consensus 130 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 209 (310)
T 3s95_A 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFG 209 (310)
T ss_dssp ECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred cCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHH
Confidence 99999999999999999999999999877554221100 000 0011223334444445555567889999999
Q ss_pred HHHHHHHHHh
Q 011399 362 PALRNFFDDA 371 (487)
Q Consensus 362 ~~l~~~~~~~ 371 (487)
+.+++++++.
T Consensus 210 ~~l~el~~g~ 219 (310)
T 3s95_A 210 IVLCEIIGRV 219 (310)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhcCC
Confidence 9999999753
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-25 Score=221.88 Aligned_cols=289 Identities=15% Similarity=0.126 Sum_probs=172.6
Q ss_pred HHhhhcccCCcccccccccEEEEEEE-ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQL-KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~-~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
+.+.|+.. +.||+|+||.||+|.+ +.+|+.||||+.+..... .
T Consensus 12 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~----------------------------------~ 55 (339)
T 1z57_A 12 LSARYEIV--DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY----------------------------------C 55 (339)
T ss_dssp ETTTEEEE--EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHH----------------------------------H
T ss_pred ccCceEEE--EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCch----------------------------------h
Confidence 34445555 7899999999999998 457899999998743110 1
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGI 277 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i 277 (487)
+. +.+|...+..+.+.. ......++.++. ......++||||+ |++|.++..... ...+. ...+..++
T Consensus 56 ~~------~~~e~~~l~~l~~~~-~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi 127 (339)
T 1z57_A 56 EA------ARSEIQVLEHLNTTD-PNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQI 127 (339)
T ss_dssp HH------HHHHHHHHHHHHHHC-TTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHHhhhcC-CCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHH
Confidence 11 122333333333321 111222333332 3345679999999 778877644332 12333 34556788
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcC-------------------CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCH
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATP-------------------EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDY 338 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~-------------------~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~ 338 (487)
..+|.|+|++|++|||+||+|||++. ++.++|+|||++........ ... .+..+..|
T Consensus 128 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~---gt~~y~aP 203 (339)
T 1z57_A 128 CKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS-TLV---STRHYRAP 203 (339)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCC-SSC---SCGGGCCH
T ss_pred HHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccccc-ccc---CCccccCh
Confidence 89999999999999999999999987 67899999999986543211 011 12233444
Q ss_pred HHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhh
Q 011399 339 EAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLAL 418 (487)
Q Consensus 339 ~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~ 418 (487)
|. ...+-.++++|+||+|+.+++++++. .++...+.......+..... ..|+.+..-.+.. ....
T Consensus 204 E~-----~~~~~~~~~~Di~slG~il~el~~g~--~pf~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~----~~~~ 268 (339)
T 1z57_A 204 EV-----ILALGWSQPCDVWSIGCILIEYYLGF--TVFPTHDSKEHLAMMERILG----PLPKHMIQKTRKR----KYFH 268 (339)
T ss_dssp HH-----HTTSCCCTHHHHHHHHHHHHHHHHSS--CSCCCSCHHHHHHHHHHHHC----SCCHHHHHHCSCG----GGEE
T ss_pred HH-----hhCCCCCcchhhHHHHHHHHHHHhCC--CCCCCCChHHHHHHHHHHhC----CCCHHHHhhccch----hHHh
Confidence 43 33344578899999999999999853 44555454444433333322 3344322111000 0000
Q ss_pred hhCCCCChHHhHhHHHHHHhc---------cCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 419 YADPNFKVLAASYPYFAKRLL---------TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 419 ~ldP~~~~~~~~~p~~~~~l~---------~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
....++........+..+... ...++.+++.+.+||..||..|++..+.+.|+||+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 269 HDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334 (339)
T ss_dssp TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred hccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence 000011111111111111110 012467889999999999999999999999999963
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-27 Score=242.07 Aligned_cols=268 Identities=20% Similarity=0.210 Sum_probs=164.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||++...... ...++++++ ...|+|++.+.+
T Consensus 60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~E~~il~----------~l~hpniv~l~~-------------- 114 (420)
T 1j1b_A 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-KNRELQIMR----------KLDHCNIVRLRY-------------- 114 (420)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS-CCHHHHHHH----------TCCCTTBCCEEE--------------
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEecccchh-HHHHHHHHH----------HcCCCCccceee--------------
Confidence 7899999999999999888999999998654211 112222221 112444333321
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec---CC--CCceEEEeecCCCCcCcHHH-HH--hcCCCH--HHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD---YT--SGKVLTMEWVEGVKLNEQVA-IE--SQGLKV--LDLVNTGIQCSLRQ 283 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~---~~--~~~~LvmE~~~G~~L~~~~~-~~--~~~~~~--~~~~~~~i~~~l~~ 283 (487)
++.. .. ...++||||++| ++.+... .. ....+. ...+..++..+|.|
T Consensus 115 ----------------------~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~ 171 (420)
T 1j1b_A 115 ----------------------FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171 (420)
T ss_dssp ----------------------EEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------EEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 1111 01 124689999987 3433322 11 222333 44566788899999
Q ss_pred HHHCCccccCCCCCCeEEcCC-CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~-g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
||+.||+||||||+|||++.+ +.+||+|||+++.+...... .....+..+..||.+. .....+.++|+||+|+
T Consensus 172 LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~--~~~~~t~~y~aPE~~~----~~~~~~~~~DiwSlG~ 245 (420)
T 1j1b_A 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIF----GATDYTSSIDVWSAGC 245 (420)
T ss_dssp HHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC--CSCCSCTTSCCHHHHT----TCSSCCTHHHHHHHHH
T ss_pred HHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCc--eeeeeCCCcCCHHHHc----CCCCCCchhhhHHHHH
Confidence 999999999999999999965 56899999999876433110 0111123344555431 1224578899999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChH---H-hHhHHHHHHh
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL---A-ASYPYFAKRL 438 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~---~-~~~p~~~~~l 438 (487)
.+++++++. .++...+....+..+...+ +.|..- .+ ...+|.+.-. . ...|+ ...+
T Consensus 246 il~ell~G~--~pf~~~~~~~~l~~i~~~l-----g~p~~~-----~~-------~~~~~~~~~~~~p~~~~~~~-~~~~ 305 (420)
T 1j1b_A 246 VLAELLLGQ--PIFPGDSGVDQLVEIIKVL-----GTPTRE-----QI-------REMNPNYTEFKFPQIKAHPW-TKVF 305 (420)
T ss_dssp HHHHHHHSS--CSSCCSSHHHHHHHHHHHH-----CSCCHH-----HH-------HHHCSCCCCCCCCCCCCCCH-HHHS
T ss_pred HHHHHHhCC--CCCCCCCHHHHHHHHHHHh-----CCCCHH-----HH-------HhhChhhhhhccCccCCCCH-HHhc
Confidence 999999853 4555544433333333222 112110 00 0112222110 0 11222 2223
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
....++++++.+.+||..||.+|++..+.+.|+||+-
T Consensus 306 ~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~ 342 (420)
T 1j1b_A 306 RPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342 (420)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred CCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence 3456899999999999999999999999999999954
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=221.15 Aligned_cols=253 Identities=15% Similarity=0.139 Sum_probs=157.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+........ .. +.+
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~------~~~ 69 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----------------------------------EE------IKQ 69 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTT----------------------------------HH------HHH
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCcccH----------------------------------HH------HHH
Confidence 78999999999999998899999999986432110 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec--------CCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD--------YTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLR 282 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~--------~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~ 282 (487)
|...+.++ ..+++ +++++.. .....++||||++|++|.++..... ...+. ...+..++..+|.
T Consensus 70 e~~~l~~l----~~h~~--i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 143 (326)
T 2x7f_A 70 EINMLKKY----SHHRN--IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143 (326)
T ss_dssp HHHHHHHH----CCSTT--BCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc----cCCCC--eeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Confidence 22222222 12222 1222211 1356789999999999998855422 23443 3445678888999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
|||+.|++|+|+||+||+++.+|.++|+|||++..+...... ......+..+..||.+.......+..++++|+||+|+
T Consensus 144 ~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~ 222 (326)
T 2x7f_A 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI 222 (326)
T ss_dssp HHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHH
T ss_pred HHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccc-cccccCCccccChhhhccccccCcCCCccchHHHHHH
Confidence 999999999999999999999999999999999877543211 1111223344556554321111344578899999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+++++++. .++...+.......+. ....|.. .....
T Consensus 223 il~~l~~g~--~p~~~~~~~~~~~~~~----------------------------~~~~~~~-------------~~~~~ 259 (326)
T 2x7f_A 223 TAIEMAEGA--PPLCDMHPMRALFLIP----------------------------RNPAPRL-------------KSKKW 259 (326)
T ss_dssp HHHHHHHSS--CTTTTSCHHHHHHHHH----------------------------HSCCCCC-------------SCSCS
T ss_pred HHHHHHhCC--CCCCCCcHHHHHHHhh----------------------------cCccccC-------------Ccccc
Confidence 999999843 3443333221111100 0001111 01234
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
++.+++.+.+||..||..|++..+.+.|+||.-.
T Consensus 260 ~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 260 SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred CHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 6788889999999999999999999999998543
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-26 Score=226.30 Aligned_cols=302 Identities=14% Similarity=0.090 Sum_probs=167.0
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|... +.||+|+||.||+|++..+|+.||||++........ +.+.+....+....|++++.+++.+.
T Consensus 8 ~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~e~~~l~~l~h~~iv~~~~~~~ 78 (320)
T 2i6l_A 8 DLGSRYMDL--KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSV-------KHALREIKIIRRLDHDNIVKVFEILG 78 (320)
T ss_dssp EETTTEEEE--EECC-----CEEEEEETTTTEEEEEEEEECCSHHHH-------HHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred ccCCceeEE--EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHH-------HHHHHHHHHHHhcCCCCeeEEEEecc
Confidence 344445555 789999999999999998899999999875532211 11111111111222444433322100
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEece--eeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPD--IFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQ 278 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~--v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~ 278 (487)
. ... .+.. -........++||||++| +|.++.. ....+. ...+..++.
T Consensus 79 ~------------------------~~~-~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~--~~~~~~~~~~~~~~qi~ 130 (320)
T 2i6l_A 79 P------------------------SGS-QLTDDVGSLTELNSVYIVQEYMET-DLANVLE--QGPLLEEHARLFMYQLL 130 (320)
T ss_dssp T------------------------TSC-BCCC----CCSCSEEEEEEECCSE-EHHHHHT--TCCCCHHHHHHHHHHHH
T ss_pred c------------------------ccc-ccccccccccccCceeEEeeccCC-CHHHHhh--cCCccHHHHHHHHHHHH
Confidence 0 000 0000 000122456899999985 7776633 333333 344567888
Q ss_pred HHHHHHHHCCccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDV 355 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (487)
.++.|||+.|++|+|+||+||+++ .++.++|+|||++..+....... ......+..+..||.+. ..+..++++
T Consensus 131 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~ 206 (320)
T 2i6l_A 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL----SPNNYTKAI 206 (320)
T ss_dssp HHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHH----CTTCCCHHH
T ss_pred HHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhc----CcccCCchh
Confidence 899999999999999999999997 56799999999999875432110 00001112234444331 224557788
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHH
Q 011399 356 DVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFA 435 (487)
Q Consensus 356 Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~ 435 (487)
|+||+|+.+++++++. .++...+.......+ ....+...+.....+...+...- ......|... .
T Consensus 207 Di~slG~il~el~~g~--~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~ 271 (320)
T 2i6l_A 207 DMWAAGCIFAEMLTGK--TLFAGAHELEQMQLI---LESIPVVHEEDRQELLSVIPVYI-RNDMTEPHKP---------L 271 (320)
T ss_dssp HHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHH---HHHSCCCCHHHHHHHHTTSCHHH-HHHTTSCCCC---------H
T ss_pred hhHhHHHHHHHHHhCC--CCCCCCCHHHHHHHH---HHhcCCCchhhhhhhhhcCcccc-cccccCCCCC---------h
Confidence 9999999999999843 455554433333222 22222222211111100000000 0000111111 1
Q ss_pred HHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccccccc
Q 011399 436 KRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVC 480 (487)
Q Consensus 436 ~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~ 480 (487)
..+....++++++.+.+||..||..|++..+.+.|+||.....|.
T Consensus 272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 272 TQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp HHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred hHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence 123345789999999999999999999999999999997665554
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-27 Score=231.16 Aligned_cols=273 Identities=17% Similarity=0.155 Sum_probs=158.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||+++...... .. +. +.+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------~~--------~~------~~~ 56 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR------------------------PV--------DV------QMR 56 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS------------------------CH--------HH------HHH
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccc------------------------hH--------HH------HHH
Confidence 67999999999999999889999999986421110 00 00 112
Q ss_pred HHHHHHHHHHHhCCCCCe-EeceeeecC-CCCceEEEeecCCCCcCcHHHHHhc--CCCH--HHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQ--GLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
|+..+.++ . ++++ .+-.++... ....++||||++|++|.++...... +.+. ...+..++..+|.|||+.
T Consensus 57 E~~~l~~l----~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 131 (319)
T 4euu_A 57 EFEVLKKL----N-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131 (319)
T ss_dssp HHHHHHHC----C-CTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhc----C-CCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22222222 1 2221 111122221 2356899999999999887543322 1343 345567888899999999
Q ss_pred CccccCCCCCCeEE----cCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH---cCCCCCCCCcchH
Q 011399 288 GYFHADPHPGNLLA----TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA---LDFLSPDVDVTPI 360 (487)
Q Consensus 288 givH~Dlkp~Nili----~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~Di~sl 360 (487)
|++|||+||+|||+ +.++.++|+|||++..+...... .....+..+..||.+...... .+..++++|+||+
T Consensus 132 ~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diwsl 209 (319)
T 4euu_A 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209 (319)
T ss_dssp TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCB--CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHH
T ss_pred CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCce--eecccCCCccCHHHhhhccccccccCCCCcHHHHHHH
Confidence 99999999999999 77788999999999876543210 011112334445543221110 2455788999999
Q ss_pred HHHHHHHHHHhccCCCCcC----cHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 361 VPALRNFFDDALNSSVSEL----NFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
|+.+++++++. .|+... ....++. .++...+...++.+... +.-.....+.+....
T Consensus 210 G~il~el~~g~--~pf~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~-------~~~~~~~~~~~~~~~-------- 269 (319)
T 4euu_A 210 GVTFYHAATGS--LPFRPFEGPRRNKEVMY---KIITGKPSGAISGVQKA-------ENGPIDWSGDMPVSC-------- 269 (319)
T ss_dssp HHHHHHHHHSS--CSEECTTCGGGCHHHHH---HHHHHCCTTCCEEEECS-------TTCCEEEESSCCTTC--------
T ss_pred HHHHHHHHhCC--CCCCCCCccchhHHHHH---HHhcCCCcccchhhhcc-------cCCccccCccCCccc--------
Confidence 99999999843 233221 1122222 22222222211110000 000000001111000
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhcc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTIN 471 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~ 471 (487)
.+....++.+++.+.+||..||.+||+..+.+.|+
T Consensus 270 ~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 270 SLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp SSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred ccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 01112245677899999999999999998887765
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.2e-27 Score=238.01 Aligned_cols=272 Identities=18% Similarity=0.204 Sum_probs=164.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++. .+..||+|++...... ...++.+++ ...|+|++.+.+
T Consensus 46 ~~lG~G~~g~V~~a~~~-~~~~~aikk~~~~~~~-~~~E~~il~----------~l~h~niv~l~~-------------- 99 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLV-ESDEVAIKKVLQDKRF-KNRELQIMR----------IVKHPNVVDLKA-------------- 99 (394)
T ss_dssp EEEEEETTEEEEEEEET-TTEEEEEEEEECCTTS-CCHHHHHHH----------TCCCTTBCCEEE--------------
T ss_pred EEEeeCCCeEEEEEEEC-CCCeEEEEEEecCcch-HHHHHHHHH----------hCCCCCcceEEE--------------
Confidence 78999999999999998 4455899887543211 111222221 112444333222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC-----CCCceEEEeecCCCCcCcHHHHH--hcCCC--HHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY-----TSGKVLTMEWVEGVKLNEQVAIE--SQGLK--VLDLVNTGIQCSLRQL 284 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~-----~~~~~LvmE~~~G~~L~~~~~~~--~~~~~--~~~~~~~~i~~~l~~l 284 (487)
++... ....++||||++|+.+....... ....+ ....+..++..+|.||
T Consensus 100 ----------------------~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L 157 (394)
T 4e7w_A 100 ----------------------FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157 (394)
T ss_dssp ----------------------EEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------EEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 11111 11257999999986554433222 12233 3445668888999999
Q ss_pred HHCCccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 285 LEYGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
|+.||+||||||+|||++ .+|.+||+|||+++.+...... .....+..+..||.+. .....+.++|+||+|+.
T Consensus 158 H~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~--~~~~~t~~y~aPE~~~----~~~~~~~~~DiwSlG~i 231 (394)
T 4e7w_A 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSYICSRYYRAPELIF----GATNYTTNIDIWSTGCV 231 (394)
T ss_dssp HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC--CSSCSCGGGCCHHHHT----TCSSCCTHHHHHHHHHH
T ss_pred HHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCC--cccccCcCccCHHHHc----CCCCCCcHHHHHHHHHH
Confidence 999999999999999999 7999999999999876433110 0111123344555431 12245788999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++. .++...+....+..+...+. .|+.- .++.+ ........+... ...|+ ...+....+
T Consensus 232 l~ell~g~--~pf~~~~~~~~l~~i~~~~g-----~p~~~--~~~~~-----~~~~~~~~~~~~-~~~~~-~~~~~~~~~ 295 (394)
T 4e7w_A 232 MAELMQGQ--PLFPGESGIDQLVEIIKVLG-----TPSRE--QIKTM-----NPNYMEHKFPQI-RPHPF-SKVFRPRTP 295 (394)
T ss_dssp HHHHHHSS--CSSCCSSHHHHHHHHHHHHC-----CCCHH--HHHHH-----CGGGSSSCCCCC-CCCCH-HHHSCTTCC
T ss_pred HHHHHhCC--CCCCCCCHHHHHHHHHHHhC-----CCCHH--HHHhh-----Chhhhhhccccc-cCCcH-HHhccccCC
Confidence 99999853 45555554444444433221 22211 00111 000111111000 01122 223334578
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+++++.+.+||..||..|++..+.+.|+||+-
T Consensus 296 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 327 (394)
T 4e7w_A 296 PDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327 (394)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred HHHHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence 99999999999999999999999999999963
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-25 Score=216.95 Aligned_cols=263 Identities=11% Similarity=0.079 Sum_probs=166.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|+++.+|+.||||+++....... . ..-.....+. +.+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------~-~~~~~~~~~~------~~~ 72 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF-----------------------S-AEEVQELREA------TLK 72 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTC-----------------------C-HHHHHHHHHH------HHH
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEeccccccc-----------------------C-HHHHHHHHHH------HHH
Confidence 789999999999999998999999999875421100 0 0000111122 223
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++. +++++.-..-+.......++||||++|++|.++.... ...+ ....+..++..++.++|+.|++|
T Consensus 73 e~~~l~~l~----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 147 (298)
T 1phk_A 73 EVDILRKVS----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNIVH 147 (298)
T ss_dssp HHHHHHHHT----TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhc----CCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 333333332 2333221111223345679999999999998875432 2333 34455677888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcchHHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY-ALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
+|+||+||+++.+|.++|+|||++..+...... .....+..+..||.+..... ..+..+.++|+||+|+.+++++++
T Consensus 148 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g 225 (298)
T 1phk_A 148 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225 (298)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCEECCTTCCB--CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred CCCCcceEEEcCCCcEEEecccchhhcCCCccc--ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHC
Confidence 999999999999999999999999876543110 00011223445555432211 123346788999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .++...+.......+.. .....+ .|. ....++.+++.+
T Consensus 226 ~--~p~~~~~~~~~~~~~~~----~~~~~~--------------------~~~---------------~~~~~~~l~~li 264 (298)
T 1phk_A 226 S--PPFWHRKQMLMLRMIMS----GNYQFG--------------------SPE---------------WDDYSDTVKDLV 264 (298)
T ss_dssp S--CSSCCSSHHHHHHHHHH----TCCCCC--------------------TTT---------------GGGSCHHHHHHH
T ss_pred C--CCCcCccHHHHHHHHhc----CCcccC--------------------ccc---------------ccccCHHHHHHH
Confidence 3 34433332222111110 000000 000 113467889999
Q ss_pred HHHHhhcCcccccccchhhccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+||..||..|++..+.+.|+||.
T Consensus 265 ~~~l~~dp~~Rps~~~ll~h~~~~ 288 (298)
T 1phk_A 265 SRFLVVQPQKRYTAEEALAHPFFQ 288 (298)
T ss_dssp HHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHccCCcccCCCHHHHHhChHhh
Confidence 999999999999999999999995
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-26 Score=232.03 Aligned_cols=254 Identities=12% Similarity=0.076 Sum_probs=164.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||+|+......... ...+. +.+
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~------------------------------~~~~~------~~~ 90 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------------------------------HQREK------MSM 90 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH------------------------------HHHHH------HHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCH------------------------------HHHHH------HHH
Confidence 789999999999999998899999999864311100 00011 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++ .+++ +.+++ .......++||||++|++|.++.... ...+ ....+..++..+|.|||+.|+
T Consensus 91 E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i 162 (335)
T 2owb_A 91 EISIHRSL-----AHQH--VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRV 162 (335)
T ss_dssp HHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhC-----CCCC--CCeEEEEEecCCeEEEEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 22222221 1222 22222 23345678999999999998874432 2333 344556788889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++..+....... .....+..+..||. ......+.+.|+||+|+.++++++
T Consensus 163 vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~gt~~y~aPE~-----~~~~~~~~~~Di~slG~il~~l~~ 236 (335)
T 2owb_A 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEV-----LSKKGHSFEVDVWSIGCIMYTLLV 236 (335)
T ss_dssp ECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB-CCCCSCCSSCCHHH-----HHTSCBCTHHHHHHHHHHHHHHHH
T ss_pred EecCCCchhEEEcCCCCEEEeeccCceecccCcccc-cccCCCccccCHHH-----hccCCCCchhhHHHHHHHHHHHHH
Confidence 999999999999999999999999998664221000 00001112333443 334445778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+.......+. .....+ ....++.+++.
T Consensus 237 g~--~pf~~~~~~~~~~~~~----~~~~~~---------------------------------------~~~~~~~~~~l 271 (335)
T 2owb_A 237 GK--PPFETSCLKETYLRIK----KNEYSI---------------------------------------PKHINPVAASL 271 (335)
T ss_dssp SS--CTTCCSSHHHHHHHHH----HTCCCC---------------------------------------CTTSCHHHHHH
T ss_pred Cc--CCCCCCCHHHHHHHHh----cCCCCC---------------------------------------CccCCHHHHHH
Confidence 43 3444333322211110 000000 11346778889
Q ss_pred HHHHHhhcCcccccccchhhccccccccccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDFEFVVCDI 482 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~ 482 (487)
+.+||..||..|++..+.+.|+||.-.+.+..+
T Consensus 272 i~~~l~~dp~~Rps~~ell~~~~~~~~~~~~~~ 304 (335)
T 2owb_A 272 IQKMLQTDPTARPTINELLNDEFFTSGYIPARL 304 (335)
T ss_dssp HHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCC
T ss_pred HHHHccCChhHCcCHHHHhcCccccCCCccccC
Confidence 999999999999999999999999776665443
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-27 Score=229.07 Aligned_cols=255 Identities=16% Similarity=0.155 Sum_probs=164.5
Q ss_pred CCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 121 g~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
....++.|... +.||+|+||+||+|++..+|+.||||+.+...... .
T Consensus 17 ~~~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------~------- 63 (303)
T 3a7i_A 17 KADPEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED------------------------E------- 63 (303)
T ss_dssp EECGGGTEEEE--EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST------------------------T-------
T ss_pred CCChHHHHHHh--hhhcccCCeEEEEEEECCCCcEEEEEEecccccHH------------------------H-------
Confidence 34556677766 78999999999999998899999999987542110 0
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTG 276 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~ 276 (487)
.+. +.+|...+.++ .++. +++++ .......++||||++|++|.++.. ....+. ...+..+
T Consensus 64 -~~~------~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~q 127 (303)
T 3a7i_A 64 -IED------IQQEITVLSQC-----DSPY--VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILRE 127 (303)
T ss_dssp -HHH------HHHHHHHHHHC-----CCTT--BCCEEEEEEETTEEEEEEECCTTEEHHHHHT--TSCCCHHHHHHHHHH
T ss_pred -HHH------HHHHHHHHHhC-----CCCC--EeEEEEEEecCCeEEEEEEeCCCCcHHHHHh--cCCCCHHHHHHHHHH
Confidence 001 12222222221 1222 22222 222456789999999999988743 333443 3445577
Q ss_pred HHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 277 i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
+..++.++|+.|++|+|+||+||+++.+|.++|+|||++..+....... .....+..+..|| ....+..++++|
T Consensus 128 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~y~aPE-----~~~~~~~~~~~D 201 (303)
T 3a7i_A 128 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPE-----VIKQSAYDSKAD 201 (303)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB-CCCCSCGGGCCHH-----HHTTCCBCTHHH
T ss_pred HHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccccc-CccCCCcCccCHH-----HHhcCCCCchhh
Confidence 8889999999999999999999999999999999999997664321000 0000112233344 334455577899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .++...+.......+. ....|.
T Consensus 202 i~slG~il~~l~~g~--~p~~~~~~~~~~~~~~----------------------------~~~~~~------------- 238 (303)
T 3a7i_A 202 IWSLGITAIELARGE--PPHSELHPMKVLFLIP----------------------------KNNPPT------------- 238 (303)
T ss_dssp HHHHHHHHHHHHHSS--CTTTTSCHHHHHHHHH----------------------------HSCCCC-------------
T ss_pred hHHHHHHHHHHccCC--CCCCCcCHHHHHHHhh----------------------------cCCCCC-------------
Confidence 999999999999843 3333333221111110 000111
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+....++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 239 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~ 275 (303)
T 3a7i_A 239 -LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIL 275 (303)
T ss_dssp -CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHH
T ss_pred -CccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhh
Confidence 1123467788899999999999999999999999984
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-26 Score=225.95 Aligned_cols=264 Identities=16% Similarity=0.129 Sum_probs=162.6
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+-|... +.||+|+||.||+|+++.+|+.||||++.......-.. ...
T Consensus 10 ~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-------------------------------~~~ 56 (322)
T 2ycf_A 10 DEYIMS--KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSA-------------------------------REA 56 (322)
T ss_dssp HHEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEECC------------------------------------------
T ss_pred hceeEe--eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhccc-------------------------------ccc
Confidence 335444 78999999999999999899999999987542110000 000
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLR 282 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~ 282 (487)
....++.+|...+.++ .+++ +.+-.++. ....++||||++|++|.+.... ....+. ...+..++..+|.
T Consensus 57 ~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~ 128 (322)
T 2ycf_A 57 DPALNVETEIEILKKL-----NHPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQ 128 (322)
T ss_dssp ----CHHHHHHHHHHC-----CCTTBCCEEEEEE--SSSEEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHhC-----CCCCCceEeeEEc--CCceEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHH
Confidence 0111233444443333 1222 12222222 2447999999999999776332 223333 3445678888999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCc---EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGK---LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~---i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
|||++|++|+|+||+||+++.++. ++|+|||++..+...... .....+..+..||.+.. ...+..+.++|+||
T Consensus 129 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~gt~~y~aPE~~~~--~~~~~~~~~~Di~s 204 (322)
T 2ycf_A 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM--RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWS 204 (322)
T ss_dssp HHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHH--HHHHSCCTTCCHHHHHH--TTTTTCTTHHHHHH
T ss_pred HHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccccc--ccccCCcCccCchhhcc--CCCCCCCchhhHHH
Confidence 999999999999999999987665 999999999887544221 11122233445554321 01234567899999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHH-HHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 360 IVPALRNFFDDALNSSVSELNFK-TIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
+|+.+++++++.. ++...... .+...+ .......++ ..
T Consensus 205 lG~il~~l~~g~~--pf~~~~~~~~~~~~~----~~~~~~~~~-----------------------------------~~ 243 (322)
T 2ycf_A 205 LGVILFICLSGYP--PFSEHRTQVSLKDQI----TSGKYNFIP-----------------------------------EV 243 (322)
T ss_dssp HHHHHHHHHHSSC--SSCSTTCSSCHHHHH----HHTCCCCCH-----------------------------------HH
T ss_pred HHHHHHHHHhCCC--CCcccchHHHHHHHH----HhCccccCc-----------------------------------hh
Confidence 9999999998543 33221100 000000 000000000 11
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
....++.+++.+.+||..||..|++..+.+.|+||..
T Consensus 244 ~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 1245788899999999999999999999999999964
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=222.40 Aligned_cols=223 Identities=17% Similarity=0.129 Sum_probs=134.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+. +|+.||||++.......- . .+. +.+
T Consensus 43 ~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~--~-----------------------------~~~------~~~ 83 (309)
T 3p86_A 43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAE--R-----------------------------VNE------FLR 83 (309)
T ss_dssp EEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHH--H-----------------------------HHH------HHH
T ss_pred eEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHH--H-----------------------------HHH------HHH
Confidence 6899999999999987 699999999875421110 0 001 223
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh----cCCCHHHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES----QGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
|+..+.++. ++++ ++++ .......++||||++|++|.++..... ........+..++..++.|||+.
T Consensus 84 E~~~l~~l~-----hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 156 (309)
T 3p86_A 84 EVAIMKRLR-----HPNI--VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156 (309)
T ss_dssp HHHHHHHCC-----CTTB--CCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHhCC-----CCCE--eeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 333333331 2222 2222 233456799999999999988744211 22223344567888899999999
Q ss_pred C--ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 288 G--YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 288 g--ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
| ++|||+||+||+++.+|.++|+|||++......... ..... +++..++++....+..++++|+||+|+.++
T Consensus 157 ~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~-----gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 230 (309)
T 3p86_A 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS-SKSAA-----GTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230 (309)
T ss_dssp SSCCCCTTCCGGGEEECTTCCEEECCCC-----------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred CCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccc-cccCC-----CCccccChhhhcCCCCCchhhHHHHHHHHH
Confidence 9 999999999999999999999999999765433211 11111 222333344444455688899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHh--hCCCCCChHHHHHHHHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLY--QYPFNVPAYYALILRSL 410 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~p~~~~~l~r~l 410 (487)
+++++ ..|+...+.......+..... ..+..+|+.+..+++.+
T Consensus 231 elltg--~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 275 (309)
T 3p86_A 231 ELATL--QQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGC 275 (309)
T ss_dssp HHHHC--CCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHHhC--CCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHH
Confidence 99985 456666665554444322111 22334555555444444
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-26 Score=228.50 Aligned_cols=281 Identities=19% Similarity=0.204 Sum_probs=167.1
Q ss_pred HhhhcccCCcccccccccEEEEEEEc-cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLK-YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~-~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
.+.|... +.||+|+||.||+|++. .+|+.||||+.+...... ...
T Consensus 10 ~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~--------- 55 (326)
T 1blx_A 10 DQQYECV--AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-----------------------GMP--------- 55 (326)
T ss_dssp GGTEEEE--EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-----------------------SCB---------
T ss_pred hhceeee--eeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-----------------------cCC---------
Confidence 3445554 78999999999999984 578999999986432110 000
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCe-Eeceeee----cCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDV-LVPDIFW----DYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNT 275 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~----~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~ 275 (487)
..+.+|...+.++.. + .++++ .+-.++. +.....++||||++| +|.++..... .+.+. ...+..
T Consensus 56 -----~~~~~e~~~l~~l~~-~-~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~ 127 (326)
T 1blx_A 56 -----LSTIREVAVLRHLET-F-EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMF 127 (326)
T ss_dssp -----CTHHHHHHHHHHHHH-T-CCTTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHH
T ss_pred -----chhhHHHHHHHhhhc-c-CCCCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHH
Confidence 001112222222211 0 12221 1111111 123557899999986 7777643321 12343 344567
Q ss_pred HHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 011399 276 GIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV 355 (487)
Q Consensus 276 ~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (487)
++..+|.++|+.|++|+|+||+||+++.+|.++|+|||++..+...... .. ..+.+..++++....+..++++
T Consensus 128 qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~~-----~~~~~~y~aPE~~~~~~~~~~~ 200 (326)
T 1blx_A 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TS-----VVVTLWYRAPEVLLQSSYATPV 200 (326)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGG--CC-----CCCCCTTCCHHHHTTCCCCTHH
T ss_pred HHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCc--cc-----cccccceeCHHHHhcCCCCcch
Confidence 7888999999999999999999999999999999999999887644211 00 1112223333344445567889
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhC-CCCCChHHHHHHHHHHHHHHhhhhhCCCCChHH-hHhHH
Q 011399 356 DVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQY-PFNVPAYYALILRSLTVLEGLALYADPNFKVLA-ASYPY 433 (487)
Q Consensus 356 Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~-~~~p~ 433 (487)
|+||+|+.+++++++. .++...+....+..+....... ....|... ..|...... ...+
T Consensus 201 Di~slG~il~~l~~g~--~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~- 261 (326)
T 1blx_A 201 DLWSVGCIFAEMFRRK--PLFRGSSDVDQLGKILDVIGLPGEEDWPRDV----------------ALPRQAFHSKSAQP- 261 (326)
T ss_dssp HHHHHHHHHHHHHHSS--CSCCCSSHHHHHHHHHHHHCCCCGGGSCTTC----------------SSCGGGSCCCCCCC-
T ss_pred hHHHHHHHHHHHHcCC--CCCCCCCHHHHHHHHHHHcCCCCcccCcccc----------------ccchhhhcccCcch-
Confidence 9999999999999743 4555444333333332221100 00011000 000000000 0000
Q ss_pred HHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 434 FAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 434 ~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
...+....++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 262 -~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 301 (326)
T 1blx_A 262 -IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301 (326)
T ss_dssp -GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred -hhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccc
Confidence 1123345788999999999999999999999999999994
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.4e-25 Score=218.30 Aligned_cols=161 Identities=17% Similarity=0.179 Sum_probs=111.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChH-----------HHHHHHHHHHHHHHHHHhh----hh-----------
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE-----------EAIGLDFYLIRGVGFLINK----YV----------- 187 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~-----------~~~~~dl~~l~~~~~~~~~----~~----------- 187 (487)
+.||+|+||+||+|++ +|+.||||+++.... +.+..++.+++.+..+... ..
T Consensus 26 ~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 26 EKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp EEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 7899999999999997 789999999975431 5566777777776543211 00
Q ss_pred -hcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC
Q 011399 188 -DIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG 266 (487)
Q Consensus 188 -~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~ 266 (487)
...|++++++++.+...- .. .-.-|.. ......+|||||++||++.+........
T Consensus 104 ~~~~hp~iv~~~~~~~~~~--------------------~~--~~~~~~~--~~~~~~~lv~E~~~~g~ll~~~~~~~~~ 159 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTK--------------------GS--ANDRPDF--FKDDQLFIVLEFEFGGIDLEQMRTKLSS 159 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHT--------------------CC--SSCCSCC--CCTTCEEEEEEEECCCEETGGGTTTCCC
T ss_pred cCCCcHHHHHHHHHHhhhc--------------------cc--cccCccc--cccCeEEEEEEecCCCccHHHHHhcCCC
Confidence 001577777777654310 00 0000000 0125678999999999665543222223
Q ss_pred CCHHHHHHHHHHHHHHHHH-HCCccccCCCCCCeEEcCCC--------------------cEEEEecCCCCCCCH
Q 011399 267 LKVLDLVNTGIQCSLRQLL-EYGYFHADPHPGNLLATPEG--------------------KLAFLDFGMMSETPE 320 (487)
Q Consensus 267 ~~~~~~~~~~i~~~l~~lh-~~givH~Dlkp~Nili~~~g--------------------~i~l~DFGla~~l~~ 320 (487)
......+..++..||.||| +.||+||||||+|||++.+| .+||+|||+++.+..
T Consensus 160 ~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~ 234 (336)
T 2vuw_A 160 LATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD 234 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC
Confidence 3455666788999999999 99999999999999999887 899999999987653
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-26 Score=222.91 Aligned_cols=183 Identities=16% Similarity=0.167 Sum_probs=125.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++. +++.||||+++...... + ++.+
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----------------------------------~------~~~~ 54 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSE----------------------------------E------DFIE 54 (269)
T ss_dssp EEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCH----------------------------------H------HHHH
T ss_pred heecCCCccEEEEEEec-CCCeEEEEEecccccCH----------------------------------H------HHHH
Confidence 67999999999999997 78899999997542111 0 0222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++. +++ +++++ ....+..++||||++|++|.++........+... .+..++..++.++|+.|+
T Consensus 55 E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (269)
T 4hcu_A 55 EAEVMMKLS-----HPK--LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127 (269)
T ss_dssp HHHHHHTCC-----CTT--BCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCC-----CCC--EeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 333222221 222 22332 2334567999999999999887543333344443 345678889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++............+......+..||. ...+..++++|+||+|+.++++++
T Consensus 128 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~slG~~l~~ll~ 202 (269)
T 4hcu_A 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV-----FSFSRYSSKSDVWSFGVLMWEVFS 202 (269)
T ss_dssp CCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHH-----HHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHH-----hcCCCCCchhhhHHHHHHHHHHhc
Confidence 999999999999999999999999998776543221111111122344443 344556788999999999999986
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=217.55 Aligned_cols=261 Identities=15% Similarity=0.188 Sum_probs=135.8
Q ss_pred cCCCCCCHHHHHHHHHHHhCCCHHhhhcccCC----------cccccccccEEEEEEEccCC----cEEEEEEecCChHH
Q 011399 102 DALPTFPDAEAFSCIERELGLTLDSIFSSISP----------SPIAAASLGQVYKAQLKYSG----QIVAVKVQRPGIEE 167 (487)
Q Consensus 102 d~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~----------~~ig~Gs~gqV~~a~~~~~g----~~VAVKv~~p~~~~ 167 (487)
++.+..+.......++...|....+.+..|.. +.||+|+||+||+|+++.++ ..||||+.+.....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~ 87 (333)
T 1mqb_A 8 HHHDYDIPTTENLYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE 87 (333)
T ss_dssp ------------------------------CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH
T ss_pred cccccCCCCCccccccccccCChhhhhhhccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCH
Confidence 34444445555566666677666666666654 78999999999999987443 46999999755322
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEE
Q 011399 168 AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLT 247 (487)
Q Consensus 168 ~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~Lv 247 (487)
... .++.+|+..+.++ .++++.-..-+.......++|
T Consensus 88 ~~~--------------------------------------~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 88 KQR--------------------------------------VDFLGEAGIMGQF-----SHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp HHH--------------------------------------HHHHHHHHHHHTC-----CCTTBCCEEEEECSSSSEEEE
T ss_pred HHH--------------------------------------HHHHHHHHHHHhC-----CCCCCCcEEEEEecCCCcEEE
Confidence 100 0122333333222 122221111122334667999
Q ss_pred EeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH
Q 011399 248 MEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA 325 (487)
Q Consensus 248 mE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~ 325 (487)
|||++|++|.++........+... .+..++..+|.+||+.|++|+||||+||+++.+|.++|+|||++..+.......
T Consensus 125 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 204 (333)
T 1mqb_A 125 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204 (333)
T ss_dssp EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccc
Confidence 999999999988654333444433 445778889999999999999999999999999999999999998876542211
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH-HhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHH
Q 011399 326 IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD-DALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYY 403 (487)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~ 403 (487)
.... .....+..++++....+..++++|+||+|+.++++++ +. .++...+...+...+.... ...+...|+.+
T Consensus 205 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l 279 (333)
T 1mqb_A 205 YTTS---GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE--RPYWELSNHEVMKAINDGFRLPTPMDCPSAI 279 (333)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC--CTTTTCCHHHHHHHHHTTCCCCCCTTCBHHH
T ss_pred cccC---CCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCC--CCcccCCHHHHHHHHHCCCcCCCcccCCHHH
Confidence 1110 1111122333334445556778999999999999986 32 3555555544443332211 11223345555
Q ss_pred HHHHHHH
Q 011399 404 ALILRSL 410 (487)
Q Consensus 404 ~~l~r~l 410 (487)
..+++.+
T Consensus 280 ~~li~~~ 286 (333)
T 1mqb_A 280 YQLMMQC 286 (333)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554444
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=221.02 Aligned_cols=189 Identities=16% Similarity=0.176 Sum_probs=110.2
Q ss_pred cccccccccEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|+++.+++ .||||+.+...... .+.+ .+.+....+....|++++.+++
T Consensus 29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~---~~~~E~~~l~~l~h~~iv~~~~----------- 92 (323)
T 3qup_A 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS--SDIE---EFLREAACMKEFDHPHVAKLVG----------- 92 (323)
T ss_dssp EEEEEETTEEEEEEEC-------CEEEEEEC------C--HHHH---HHHHHHHHHTTCCCTTBCCCCE-----------
T ss_pred ceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH--HHHH---HHHHHHHHHHHCCCCceehhhc-----------
Confidence 789999999999999876654 89999987542211 0111 1111111111112333222221
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCC------ceEEEeecCCCCcCcHHHHHhc-----CCCH--HHHHHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSG------KVLTMEWVEGVKLNEQVAIESQ-----GLKV--LDLVNTGI 277 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~------~~LvmE~~~G~~L~~~~~~~~~-----~~~~--~~~~~~~i 277 (487)
++. .... .++||||++|++|.++...... ..+. ...+..++
T Consensus 93 -------------------------~~~-~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi 146 (323)
T 3qup_A 93 -------------------------VSL-RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146 (323)
T ss_dssp -------------------------EEE-CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHH
T ss_pred -------------------------eee-ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHH
Confidence 111 1111 2899999999999987654332 2333 34456788
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
..++.|||+.|++|||+||+||+++.+|.++|+|||++..+....... .........+..||.+ ..+..++++|
T Consensus 147 ~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~D 221 (323)
T 3qup_A 147 ACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL-----ADNLYTVHSD 221 (323)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHH-----HHCCCCHHHH
T ss_pred HHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhh-----cCCCCCCccc
Confidence 889999999999999999999999999999999999998775442211 1111111224444443 3445578899
Q ss_pred cchHHHHHHHHHH
Q 011399 357 VTPIVPALRNFFD 369 (487)
Q Consensus 357 i~sl~~~l~~~~~ 369 (487)
+||+|+.++++++
T Consensus 222 i~slG~il~ell~ 234 (323)
T 3qup_A 222 VWAFGVTMWEIMT 234 (323)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHh
Confidence 9999999999987
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-26 Score=230.97 Aligned_cols=275 Identities=15% Similarity=0.111 Sum_probs=156.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||++...... .......++.+.. ..|+|++.+++
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~-------l~h~niv~~~~-------------- 86 (360)
T 3e3p_A 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAV-------LHHPNIVQLQS-------------- 86 (360)
T ss_dssp ----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHH-------HCCTTBCCEEE--------------
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHh-------cCCCCcccHHH--------------
Confidence 7899999999999999889999999988543211 0111111111111 11333322221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCC------CCceEEEeecCCCCcCcHHHHH--hcCCCH--HHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYT------SGKVLTMEWVEGVKLNEQVAIE--SQGLKV--LDLVNTGIQCSLRQ 283 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LvmE~~~G~~L~~~~~~~--~~~~~~--~~~~~~~i~~~l~~ 283 (487)
.+.... ...++||||++|+.+..+.... ....+. ...+..++..++.|
T Consensus 87 ----------------------~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 144 (360)
T 3e3p_A 87 ----------------------YFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144 (360)
T ss_dssp ----------------------EEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------hhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 111111 1157999999985433332211 122333 34456778889999
Q ss_pred HH--HCCccccCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 284 LL--EYGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 284 lh--~~givH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
+| +.|++||||||+|||++. +|.++|+|||++..+...... .....+..+..||.+. .....++++|+||+
T Consensus 145 lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~----~~~~~~~~~Di~sl 218 (360)
T 3e3p_A 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN--VAYICSRYYRAPELIF----GNQHYTTAVDIWSV 218 (360)
T ss_dssp HTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCC--CSTTSCGGGCCHHHHT----TCSSCCTHHHHHHH
T ss_pred HhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCc--ccccCCcceeCHHHHc----CCCCCCcHHHHHHH
Confidence 99 999999999999999996 899999999999877543211 0111122344444431 22335788999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHH---h-HhHHHHH
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA---A-SYPYFAK 436 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~---~-~~p~~~~ 436 (487)
|+.+++++++. .++...+....+..+..... ..+.... + .++|...... . ..++ ..
T Consensus 219 G~il~ell~g~--~pf~~~~~~~~~~~~~~~~~----~~~~~~~---~----------~~~~~~~~~~~~~~~~~~~-~~ 278 (360)
T 3e3p_A 219 GCIFAEMMLGE--PIFRGDNSAGQLHEIVRVLG----CPSREVL---R----------KLNPSHTDVDLYNSKGIPW-SN 278 (360)
T ss_dssp HHHHHHHHHSS--CSSCCSSHHHHHHHHHHHHC----CCCHHHH---H----------HHCTTCCCGGGGCCCCCCH-HH
T ss_pred HHHHHHHHhCC--CCcCCCChHHHHHHHHHHcC----CCCHHHH---H----------hcccchhhccccccccCCc-cc
Confidence 99999999853 56665555554444433221 1112211 1 1112111100 0 0111 11
Q ss_pred Hh---ccCCCHHHHHHHHHHHhhcCcccccccchhhccccccccc
Q 011399 437 RL---LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFV 478 (487)
Q Consensus 437 ~l---~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~ 478 (487)
.. ....++++++.+.+||..||..|++..+.+.|+||.--..
T Consensus 279 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 279 VFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp HTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred ccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 11 1124678999999999999999999999999999965433
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-25 Score=224.00 Aligned_cols=290 Identities=15% Similarity=0.107 Sum_probs=171.1
Q ss_pred CCHHhhhcccCCcccccccccEEEEEEEccCC-cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSG-QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 122 ~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g-~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
..+.+.|... +.||+|+||.||+|+++.+| +.||||+++.....
T Consensus 15 ~~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--------------------------------- 59 (355)
T 2eu9_A 15 DWLQERYEIV--GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY--------------------------------- 59 (355)
T ss_dssp CEETTTEEEE--EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHH---------------------------------
T ss_pred ceecccEEEE--EEeeccCCeEEEEEEecCCCceEEEEEEEcccccc---------------------------------
Confidence 3344445555 77999999999999997666 79999999754111
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEecee--eecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDI--FWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNT 275 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v--~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~ 275 (487)
.+. +..|...+.++.+..... ...+..+ +.......++||||+.| ++.+...... ...+. ...+..
T Consensus 60 -~~~------~~~E~~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~i~~ 130 (355)
T 2eu9_A 60 -REA------ARLEINVLKKIKEKDKEN-KFLCVLMSDWFNFHGHMCIAFELLGK-NTFEFLKENNFQPYPLPHVRHMAY 130 (355)
T ss_dssp -HHH------HHHHHHHHHHHHHHCTTS-CSCBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred -hhH------HHHHHHHHHHHhhcCCCC-ceeEEEeeeeeeeCCeEEEEEeccCC-ChHHHHHhccCCCCCHHHHHHHHH
Confidence 011 223344444444432211 1112222 22345677999999955 4444322222 23443 345567
Q ss_pred HHHHHHHHHHHCCccccCCCCCCeEE-------------------cCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhc
Q 011399 276 GIQCSLRQLLEYGYFHADPHPGNLLA-------------------TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNR 336 (487)
Q Consensus 276 ~i~~~l~~lh~~givH~Dlkp~Nili-------------------~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~ 336 (487)
++..+|.|||+.|++||||||+|||+ +.++.++|+|||++........ ... .+..+.
T Consensus 131 qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~---gt~~y~ 206 (355)
T 2eu9_A 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT-TIV---ATRHYR 206 (355)
T ss_dssp HHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCC-SSC---SCGGGC
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccccc-CCc---CCCccc
Confidence 88899999999999999999999999 5678999999999976543211 011 122333
Q ss_pred CHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHh
Q 011399 337 DYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGL 416 (487)
Q Consensus 337 ~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~ 416 (487)
.|| ...-+-.++++|+||+|+.+++++++. .++...+.......+..... ..|+.+..-.+.. ..
T Consensus 207 aPE-----~~~~~~~~~~~Di~slG~il~el~~g~--~pf~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~----~~ 271 (355)
T 2eu9_A 207 PPE-----VILELGWAQPCDVWSIGCILFEYYRGF--TLFQTHENREHLVMMEKILG----PIPSHMIHRTRKQ----KY 271 (355)
T ss_dssp CHH-----HHTTCCCCTHHHHHHHHHHHHHHHHSS--CSCCCSSHHHHHHHHHHHHC----CCCHHHHHHCSCG----GG
T ss_pred CCe-----eeecCCCCCccchHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHHHcC----CCcHHHhhhccch----hh
Confidence 444 333445578899999999999999853 45555554444444433322 3344332111000 00
Q ss_pred hhhhCCCCChHHhHhHHHHHHhc---------cCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 417 ALYADPNFKVLAASYPYFAKRLL---------TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 417 ~~~ldP~~~~~~~~~p~~~~~l~---------~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
...-...+........+...... ...++++++.+.+||..||..|++..+.+.|+||.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~ 338 (355)
T 2eu9_A 272 FYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 338 (355)
T ss_dssp EETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGG
T ss_pred hcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 00000000000001111111110 01135788999999999999999999999999995
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-26 Score=221.90 Aligned_cols=247 Identities=15% Similarity=0.142 Sum_probs=157.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|++..+|+.||||+.++..... .. ..+. +.+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~--------------------------~~~~------~~~ 60 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS----LD--------------------------VVGK------IKR 60 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----TT--------------------------CHHH------HHH
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccccc----hh--------------------------HHHH------HHH
Confidence 78999999999999998899999999986421110 00 0001 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++ .+++ +++++ ....+..++||||++|++|.++.... ...+ ....+..++..++.++|+.|+
T Consensus 61 e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 132 (276)
T 2h6d_A 61 EIQNLKLF-----RHPH--IIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRHMV 132 (276)
T ss_dssp HHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHhcC-----CCCC--EeEEEEEEecCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 22222222 1222 22222 23345679999999999998875432 2233 334456778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~ 368 (487)
+|+|+||+||+++.+|.++|+|||++......... .....+..+..||.+ ... +.+++.|+||+|+.+++++
T Consensus 133 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~-----~~~~~~~~~~Di~slG~~l~~l~ 205 (276)
T 2h6d_A 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL--RTSCGSPNYAAPEVI-----SGRLYAGPEVDIWSCGVILYALL 205 (276)
T ss_dssp SCCCCCGGGEEECTTSCEEECCCCGGGCCCC---------------CCTGGG-----TTSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCChhhEEECCCCCEEEeecccccccCCCcce--ecccCCccccCHHHH-----cCCCCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999887543211 111112223333332 111 2245689999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHH
Q 011399 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (487)
++. .++...+...+...+.. .. +. .....++.+++
T Consensus 206 ~g~--~p~~~~~~~~~~~~~~~----~~-------------------------~~--------------~~~~~~~~l~~ 240 (276)
T 2h6d_A 206 CGT--LPFDDEHVPTLFKKIRG----GV-------------------------FY--------------IPEYLNRSVAT 240 (276)
T ss_dssp HSS--CSSCCSSHHHHHHHHHH----CC-------------------------CC--------------CCTTSCHHHHH
T ss_pred hCC--CCCCCCcHHHHHHHhhc----Cc-------------------------cc--------------CchhcCHHHHH
Confidence 843 34444333322221110 00 00 00123577888
Q ss_pred HHHHHHhhcCcccccccchhhccccccc
Q 011399 449 ALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 449 ~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.+.+||..||..|++..+.+.|+||.-.
T Consensus 241 li~~~l~~~p~~Rps~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDIREHEWFKQD 268 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHHHHccCChhhCCCHHHHHhChhhccC
Confidence 9999999999999999999999999644
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=217.51 Aligned_cols=251 Identities=13% Similarity=0.107 Sum_probs=155.9
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
.+-|... +.||+|+||+||+|+++.+|+.||||+.+....... ....
T Consensus 10 ~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~------------------------------ 56 (289)
T 1x8b_A 10 TTEFHEL--EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQN------------------------------ 56 (289)
T ss_dssp HHHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH-HHHH------------------------------
T ss_pred cchhhhh--hhhcCCCceEEEEEEEcCCCceEEEEEecccccccH-HHHH------------------------------
Confidence 3445555 789999999999999988999999999875422110 0001
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCC--HHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLK--VLDLVNTGIQC 279 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~--~~~~~~~~i~~ 279 (487)
+.+|...+.+ +..++++.-..-+....+..++||||++|++|.++..... ...+ ....+..++..
T Consensus 57 ------~~~e~~~~~~----l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~ 126 (289)
T 1x8b_A 57 ------ALREVYAHAV----LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126 (289)
T ss_dssp ------HHHHHHHHHH----SCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHH----hCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHH
Confidence 1112221111 1123332111112233466789999999999998765432 2233 34455678888
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCC-------------------cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEG-------------------KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEA 340 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g-------------------~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~ 340 (487)
+|.|+|+.|++|+||||+||+++.+| .++|+|||++......... . .+..+..||.
T Consensus 127 al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~--~---gt~~y~aPE~ 201 (289)
T 1x8b_A 127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE--E---GDSRFLANEV 201 (289)
T ss_dssp HHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCC--C---CCGGGCCHHH
T ss_pred HHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcccc--C---CCccccChhH
Confidence 99999999999999999999998544 7999999998876543111 0 1122334443
Q ss_pred HHHHHHHcC-CCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhh
Q 011399 341 MARDYYALD-FLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALY 419 (487)
Q Consensus 341 ~~~~~~~~g-~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ 419 (487)
...+ ..++++|+||+|+.+++++++.. +....+ ....+ ...
T Consensus 202 -----~~~~~~~~~~~Di~slG~il~~l~~~~~--~~~~~~---~~~~~----------------------------~~~ 243 (289)
T 1x8b_A 202 -----LQENYTHLPKADIFALALTVVCAAGAEP--LPRNGD---QWHEI----------------------------RQG 243 (289)
T ss_dssp -----HTTCCTTHHHHHHHHHHHHHHHHTTCCC--CCSSSH---HHHHH----------------------------HTT
T ss_pred -----hcCCCCCCchhhHHHHHHHHHHHhcCCC--CCcchh---HHHHH----------------------------HcC
Confidence 3222 23457899999999988875321 111100 00000 000
Q ss_pred hCCCCChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 420 ADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 420 ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
..|.+ ....++.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 244 ~~~~~--------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 285 (289)
T 1x8b_A 244 RLPRI--------------PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285 (289)
T ss_dssp CCCCC--------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred CCCCC--------------CcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence 01111 1235788899999999999999999999999999963
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-27 Score=234.76 Aligned_cols=255 Identities=15% Similarity=0.115 Sum_probs=158.8
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+.|... +.||+|+||.||+|+++.+|+.||||+++......-. . .......
T Consensus 22 ~~~~y~~~--~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~---------------~--~~~~~~~-------- 74 (335)
T 3dls_A 22 YSQKYSTM--SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDC---------------W--IEDPKLG-------- 74 (335)
T ss_dssp HHHHEEEE--EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTS---------------E--EEETTTE--------
T ss_pred cccceEEE--eEEEecCCEEEEEEEECCCCcEEEEEEEehhhccccc---------------c--cchHHHH--------
Confidence 44446555 7899999999999999889999999998754210000 0 0000000
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCC-CcCcHHHHHhcCCCH--HHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGV-KLNEQVAIESQGLKV--LDLVNTGIQ 278 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~-~L~~~~~~~~~~~~~--~~~~~~~i~ 278 (487)
.+.+|+..+.++ .+++ +++++ ....+..++||||+.++ +|.++... ....+. ...+..++.
T Consensus 75 ------~~~~E~~~l~~l-----~h~~--Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~-~~~l~~~~~~~i~~qi~ 140 (335)
T 3dls_A 75 ------KVTLEIAILSRV-----EHAN--IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR-HPRLDEPLASYIFRQLV 140 (335)
T ss_dssp ------EEEHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEEECCTTSCBHHHHHHT-CCCCCHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHhC-----CCCC--EeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 011122222211 1222 22222 23345678999999766 77766332 122333 344567888
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
.+|.|||+.|++|||+||+|||++.+|.++|+|||++..+...... .....+..+..||.+. ...+.++++|+|
T Consensus 141 ~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~----~~~~~~~~~Diw 214 (335)
T 3dls_A 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF--YTFCGTIEYCAPEVLM----GNPYRGPELEMW 214 (335)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCB--CEECSCGGGCCHHHHT----TCCBCSHHHHHH
T ss_pred HHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCce--eccCCCccccChhhhc----CCCCCCCcccch
Confidence 8999999999999999999999999999999999999876543110 0000112233444321 122336678999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
|+|+.+++++++. .|+.... . .......+
T Consensus 215 slG~il~el~~g~--~pf~~~~---------------------~------------~~~~~~~~---------------- 243 (335)
T 3dls_A 215 SLGVTLYTLVFEE--NPFCELE---------------------E------------TVEAAIHP---------------- 243 (335)
T ss_dssp HHHHHHHHHHHSS--CSCSSGG---------------------G------------GTTTCCCC----------------
T ss_pred hHHHHHHHHHhCC--CchhhHH---------------------H------------HHhhccCC----------------
Confidence 9999999998743 2332110 0 00000001
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
....++++++.+.+||..||..|++..+.+.|+||.-.
T Consensus 244 ~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 244 PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281 (335)
T ss_dssp SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence 01246788999999999999999999999999999643
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-25 Score=229.55 Aligned_cols=259 Identities=17% Similarity=0.160 Sum_probs=154.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.++.+|+.||||++.+..... ... ........+.+
T Consensus 141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-----------------------~~~--------~~~~~~~~~~~ 189 (419)
T 3i6u_A 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAI-----------------------GSA--------READPALNVET 189 (419)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTT-----------------------C----------------CCHHH
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcc-----------------------ccc--------ccchhHHHHHH
Confidence 67999999999999999899999999986431100 000 00000112334
Q ss_pred HHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~giv 290 (487)
|+..+.++ .++++ .+-.++ + ....++||||++|++|.+.... ....+ ....+..++..+|.|||+.|++
T Consensus 190 E~~~l~~l-----~hpniv~l~~~~-~-~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 261 (419)
T 3i6u_A 190 EIEILKKL-----NHPCIIKIKNFF-D-AEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGII 261 (419)
T ss_dssp HHHHHHHC-----CCTTBCCCCEEE-E-SSEEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhC-----CCCCEeeEEEEE-e-cCceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 44443333 12222 111122 1 2446899999999999876332 12233 3445567888999999999999
Q ss_pred ccCCCCCCeEEcCCC---cEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 291 HADPHPGNLLATPEG---KLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 291 H~Dlkp~Nili~~~g---~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|||+||+|||++.++ .+||+|||+++.+..... ...++ +..+..||.+... ..+..++++|+||+|+.+++
T Consensus 262 HrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~g---t~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~~ 336 (419)
T 3i6u_A 262 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG---TPTYLAPEVLVSV--GTAGYNRAVDCWSLGVILFI 336 (419)
T ss_dssp CSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC------CTTHHHHHHHHHHHHHHH
T ss_pred ccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCC---CCCccCceeeecC--CCCCCCchhhhHhHHHHHHH
Confidence 999999999997654 499999999998865422 11222 2233333332100 01223446789999999998
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++.. |+........ +...........++ ......++.+
T Consensus 337 lltg~~--pf~~~~~~~~---~~~~i~~~~~~~~~-----------------------------------~~~~~~~~~~ 376 (419)
T 3i6u_A 337 CLSGYP--PFSEHRTQVS---LKDQITSGKYNFIP-----------------------------------EVWAEVSEKA 376 (419)
T ss_dssp HHHSSC--SSCCCSSSCC---HHHHHHTTCCCCCH-----------------------------------HHHTTSCHHH
T ss_pred HHHCCC--CCCCCcchHH---HHHHHhcCCCCCCc-----------------------------------hhhcccCHHH
Confidence 887432 3222110000 00000000111111 1122457889
Q ss_pred HHHHHHHHhhcCcccccccchhhccccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
++.+.+||..||..|++..+.+.|+||.-+
T Consensus 377 ~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 377 LDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred HHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 999999999999999999999999999643
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-25 Score=222.48 Aligned_cols=260 Identities=17% Similarity=0.202 Sum_probs=156.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+. +|+.||||+++...... ...+. +.+
T Consensus 15 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------------------------------~~~~~------~~~ 56 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADN-------------------------------QTLDS------YRN 56 (343)
T ss_dssp EEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCH-------------------------------HHHHH------HHH
T ss_pred EEEecCCCeEEEEEEeC-CCCEEEEEEeeccccch-------------------------------HHHHH------HHH
Confidence 78999999999999986 89999999986442110 00011 233
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++.+ ..+. ++.++ .......++||| +.|++|.++... ....+. ...+..++..+|.|||+.||
T Consensus 57 E~~~l~~l~~---~~~~--iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i 129 (343)
T 3dbq_A 57 EIAYLNKLQQ---HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGI 129 (343)
T ss_dssp HHHHHHHHTT---TCTT--BCCEEEEEECSSEEEEEEC-CCSEEHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhhh---cCCc--eEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3333333332 1122 22332 233456789999 557788877443 223343 34556788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHH-HHHHHHHhcCHHHHHHHH------HHcCCCCCCCCcchHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARDY------YALDFLSPDVDVTPIVP 362 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~g~~~~~~Di~sl~~ 362 (487)
+||||||+|||++ +|.++|+|||++..+......... ....+..+..||.+.... ...+..++++|+||+|+
T Consensus 130 iHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~ 208 (343)
T 3dbq_A 130 VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 208 (343)
T ss_dssp CCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHH
T ss_pred ecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHH
Confidence 9999999999996 789999999999988654322111 111223344555543200 01144577889999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+++++++. .|+....-. ...+. ...++.... ......
T Consensus 209 il~ell~g~--~pf~~~~~~--~~~~~----------------------------~~~~~~~~~----------~~~~~~ 246 (343)
T 3dbq_A 209 ILYYMTYGK--TPFQQIINQ--ISKLH----------------------------AIIDPNHEI----------EFPDIP 246 (343)
T ss_dssp HHHHHHHSS--CTTTTCCSH--HHHHH----------------------------HHHCTTSCC----------CCCCCS
T ss_pred HHHHHHhCC--CcchhhhhH--HHHHH----------------------------HHhcCCccc----------CCcccC
Confidence 999998743 233221100 00000 001111100 001134
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhcccccccccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCD 481 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~ 481 (487)
++.+++.+..||..||..|++..+.+.|+||.....+.+
T Consensus 247 ~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~~~~ 285 (343)
T 3dbq_A 247 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 285 (343)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCCC---
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHHhCccccccCCccc
Confidence 567889999999999999999999999999987655543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-25 Score=218.25 Aligned_cols=245 Identities=17% Similarity=0.144 Sum_probs=160.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|+...+|+.||||+..+.....- . .... +.+
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----------------------~-------~~~~------~~~ 63 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-----------------------G-------VEHQ------LRR 63 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHT-----------------------T-------CHHH------HHH
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccchH-----------------------H-------HHHH------HHH
Confidence 789999999999999998899999999863211100 0 0011 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++ .+++ +++++ .......++||||++|++|.+..... ...+. ...+..++..++.++|+.|+
T Consensus 64 e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 135 (284)
T 2vgo_A 64 EIEIQSHL-----RHPN--ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERKV 135 (284)
T ss_dssp HHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHhcC-----CCCC--EeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 22222222 1222 22222 23346678999999999998775432 23333 34456778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++........... .+++..++++....+..+++.|+||+|+.++++++
T Consensus 136 ~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 207 (284)
T 2vgo_A 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM--------CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV 207 (284)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCC--------CSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHH
T ss_pred eecCCCHHHEEEcCCCCEEEecccccccCcccccccc--------cCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHH
Confidence 9999999999999999999999999876543211111 12222333334444556788999999999999997
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+.......+. ..++.+. ...++.+++.
T Consensus 208 g~--~pf~~~~~~~~~~~~~-----------------------------~~~~~~~--------------~~~~~~~~~l 242 (284)
T 2vgo_A 208 GM--PPFDSPSHTETHRRIV-----------------------------NVDLKFP--------------PFLSDGSKDL 242 (284)
T ss_dssp SS--CTTCCSSHHHHHHHHH-----------------------------TTCCCCC--------------TTSCHHHHHH
T ss_pred CC--CCCCCCCHhHHHHHHh-----------------------------ccccCCC--------------CcCCHHHHHH
Confidence 43 3443333222111110 0111110 1346788899
Q ss_pred HHHHHhhcCcccccccchhhcccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+||..||..|++..+.+.|+||.-
T Consensus 243 i~~~l~~~p~~Rps~~~ll~h~~~~~ 268 (284)
T 2vgo_A 243 ISKLLRYHPPQRLPLKGVMEHPWVKA 268 (284)
T ss_dssp HHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred HHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence 99999999999999999999999953
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.7e-26 Score=230.74 Aligned_cols=286 Identities=12% Similarity=0.076 Sum_probs=164.8
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|... +.||+|+||+||+|++..+|+.||||+++..... .+.
T Consensus 37 ~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------------------~~~- 79 (397)
T 1wak_A 37 GRYHVI--RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY----------------------------------TET- 79 (397)
T ss_dssp TTEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH----------------------------------HHH-
T ss_pred CeEEEE--EEeeecCCeeEEEEEecCCCeEEEEEEEecCCcc----------------------------------hHH-
Confidence 344444 6799999999999999889999999999754110 011
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCC-CeEeceeeec------CCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKE-DVLVPDIFWD------YTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTG 276 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~-~v~vP~v~~~------~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~ 276 (487)
+.+|.+.+.++.+....++ +..+.+++.. .....++||||+.|..+..+......+.+ ....+..+
T Consensus 80 -----~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~q 154 (397)
T 1wak_A 80 -----ALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ 154 (397)
T ss_dssp -----HHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHH
Confidence 2233334444433211111 1112333322 23457899999965444443222212344 34456678
Q ss_pred HHHHHHHHHHC-CccccCCCCCCeEEcCCC-------------------------------------------------c
Q 011399 277 IQCSLRQLLEY-GYFHADPHPGNLLATPEG-------------------------------------------------K 306 (487)
Q Consensus 277 i~~~l~~lh~~-givH~Dlkp~Nili~~~g-------------------------------------------------~ 306 (487)
+..||.|||++ ||+||||||+|||++.+| .
T Consensus 155 i~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
T 1wak_A 155 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLK 234 (397)
T ss_dssp HHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCC
T ss_pred HHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccc
Confidence 88999999998 999999999999999776 7
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc------
Q 011399 307 LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN------ 380 (487)
Q Consensus 307 i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~------ 380 (487)
++|+|||++........ ....+..+..||. +.-+..++++|+||+|+.+++++++.. ++...+
T Consensus 235 ~kl~DfG~a~~~~~~~~----~~~gt~~y~aPE~-----~~~~~~~~~~DiwslG~il~elltg~~--pf~~~~~~~~~~ 303 (397)
T 1wak_A 235 VKIADLGNACWVHKHFT----EDIQTRQYRSLEV-----LIGSGYNTPADIWSTACMAFELATGDY--LFEPHSGEEYTR 303 (397)
T ss_dssp EEECCGGGCEETTBCSC----SCCSCGGGCCHHH-----HHTSCCCTHHHHHHHHHHHHHHHHSSC--SCCCCCCSSSCH
T ss_pred eEeccccccccccccCc----cCCCCCcccCChh-----hcCCCCCcHHHHHHHHHHHHHHhhCCC--CCCCCcccccCc
Confidence 99999999986643311 0111233444544 334446788999999999999998543 332211
Q ss_pred HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCC--CCChHHh-----HhHHHHHHh--ccCCCHHHHHHHH
Q 011399 381 FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADP--NFKVLAA-----SYPYFAKRL--LTDPNPYLRDALV 451 (487)
Q Consensus 381 ~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP--~~~~~~~-----~~p~~~~~l--~~~~~p~~r~~l~ 451 (487)
....+..+...+ -..|+.+....+.. ...... ....... ....+.... ....++.+++.+.
T Consensus 304 ~~~~~~~~~~~~----~~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 373 (397)
T 1wak_A 304 DEDHIALIIELL----GKVPRKLIVAGKYS------KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLL 373 (397)
T ss_dssp HHHHHHHHHHHH----CSCCHHHHHHCTTG------GGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHG
T ss_pred hHHHHHHHHHhc----CCCChHHhhccccc------ccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHH
Confidence 111122222221 12333321000000 000000 0000000 000111110 0112456789999
Q ss_pred HHHhhcCcccccccchhhccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+||..||..|++..+.+.|+||.
T Consensus 374 ~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 374 PMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp GGGCSSGGGSCCHHHHHTSGGGG
T ss_pred HHhccChhhcCCHHHHhhCcccc
Confidence 99999999999999999999995
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-25 Score=216.63 Aligned_cols=190 Identities=18% Similarity=0.196 Sum_probs=121.4
Q ss_pred cccccccccEEEEEE----EccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQ----LKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~----~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|+ ...+|+.||||+++........ .+.+....+....|+|++.+++.+.
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~------- 81 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-------DFEREIEILKSLQHDNIVKYKGVCY------- 81 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHH-------HHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHH-------HHHHHHHHHHhCCCCCEeeEEEEEe-------
Confidence 789999999999998 4558999999998755322110 0111111111122333333222110
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
.......++||||++|++|.++........+... .+..++..++.|||+.
T Consensus 82 ----------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 133 (295)
T 3ugc_A 82 ----------------------------SAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133 (295)
T ss_dssp ----------------------------HHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----------------------------cCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC
Confidence 0111346899999999999988654433344433 4457788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHH--HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGH--VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
|++|+|+||+||+++.+|.++|+|||++..+........... .....+..||.+ ..+..++++|+||+|+.++
T Consensus 134 ~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~~l~ 208 (295)
T 3ugc_A 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLY 208 (295)
T ss_dssp TCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHH-----HHCCCCHHHHHHHHHHHHH
T ss_pred CcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHh-----cCCCCChHHHHHHHHHHHH
Confidence 999999999999999999999999999988755422111100 011124445543 3444578899999999999
Q ss_pred HHHHH
Q 011399 366 NFFDD 370 (487)
Q Consensus 366 ~~~~~ 370 (487)
++++.
T Consensus 209 ~l~~g 213 (295)
T 3ugc_A 209 ELFTY 213 (295)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99984
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-26 Score=223.17 Aligned_cols=254 Identities=12% Similarity=0.074 Sum_probs=163.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|.+..+|+.||+|+......... ...+. +..
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~------------------------------~~~~~------~~~ 64 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------------------------------HQREK------MSM 64 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH------------------------------HHHHH------HHH
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhhccCH------------------------------HHHHH------HHH
Confidence 789999999999999998899999999864311100 00011 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++ .+++ +++++ .......++||||++|++|.++.... ...+ ....+..++..++.++|+.|+
T Consensus 65 e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i 136 (294)
T 2rku_A 65 EISIHRSL-----AHQH--VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRV 136 (294)
T ss_dssp HHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhC-----CCCC--EeeeeeeeccCCEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 22222211 1222 22222 22345578999999999998874432 2333 344556778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++..+....... .....+..+..|| .......+.+.|+||+|+.++++++
T Consensus 137 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~~l~~l~~ 210 (294)
T 2rku_A 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPE-----VLSKKGHSFEVDVWSIGCIMYTLLV 210 (294)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB-CCCCSCCSSCCHH-----HHTTSCBCTHHHHHHHHHHHHHHHH
T ss_pred cccCCChHhEEEcCCCCEEEEeccCceecccCcccc-ccccCCCCcCCcc-----hhccCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999997654221000 0000011223344 3333445778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .++...+.......+. ...... ....++.+++.
T Consensus 211 g~--~p~~~~~~~~~~~~~~----~~~~~~---------------------------------------~~~~~~~~~~l 245 (294)
T 2rku_A 211 GK--PPFETSCLKETYLRIK----KNEYSI---------------------------------------PKHINPVAASL 245 (294)
T ss_dssp SS--CTTCCSSHHHHHHHHH----TTCCCC---------------------------------------CTTSCHHHHHH
T ss_pred CC--CCCCCCCHHHHHHHHh----hccCCC---------------------------------------ccccCHHHHHH
Confidence 43 3444433322211110 000000 11346778889
Q ss_pred HHHHHhhcCcccccccchhhccccccccccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDFEFVVCDI 482 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~ 482 (487)
+.+||..||..|++..+.+.|+||.-.+.|...
T Consensus 246 i~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~~~ 278 (294)
T 2rku_A 246 IQKMLQTDPTARPTINELLNDEFFTSGYIPARL 278 (294)
T ss_dssp HHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCC
T ss_pred HHHHcccChhhCcCHHHHhhChheecCCcCCCC
Confidence 999999999999999999999999776665543
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-25 Score=217.82 Aligned_cols=230 Identities=15% Similarity=0.124 Sum_probs=150.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.++.+|+.||||+++... ....++.++... ..|+|++.+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~e~~~~~~~---------~~h~~i~~~---------------- 76 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--KARREVELHWRA---------SQCPHIVRI---------------- 76 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH--HHHHHHHHHHHH---------TTSTTBCCE----------------
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecccH--HHHHHHHHHHHh---------ccCCCchhH----------------
Confidence 56999999999999998899999999986431 111111111000 012222211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec---CCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD---YTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~---~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
-.++.. .....++||||++|++|.++..... ...+. ...+..++..++.|||+.
T Consensus 77 --------------------~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 136 (299)
T 3m2w_A 77 --------------------VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136 (299)
T ss_dssp --------------------EEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------HhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111211 1345689999999999988754432 12333 345567788899999999
Q ss_pred CccccCCCCCCeEEcC---CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 288 GYFHADPHPGNLLATP---EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 288 givH~Dlkp~Nili~~---~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
|++|+|+||+||+++. ++.++|+|||++...... ..++++|+||+|+.+
T Consensus 137 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~----------------------------~~~~~~DiwslG~il 188 (299)
T 3m2w_A 137 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE----------------------------KYDKSCDMWSLGVIM 188 (299)
T ss_dssp TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTC----------------------------GGGGHHHHHHHHHHH
T ss_pred CcccCCCCHHHEEEecCCCCCcEEEeccccccccccc----------------------------cCCchhhHHHHHHHH
Confidence 9999999999999997 788999999999876532 125678999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++++++. .++...+..... ...... ........ | .......++
T Consensus 189 ~el~tg~--~pf~~~~~~~~~-------~~~~~~--------------------~~~~~~~~-----~---~~~~~~~~~ 231 (299)
T 3m2w_A 189 YILLCGY--PPFYSNHGLAIS-------PGMKTR--------------------IRMGQYEF-----P---NPEWSEVSE 231 (299)
T ss_dssp HHHHHSS--CSCCC--------------CCSCCS--------------------SCTTCCSS-----C---HHHHTTSCH
T ss_pred HHHHHCC--CCCCCCcchhhh-------HHHHHH--------------------HhhccccC-----C---chhcccCCH
Confidence 9999843 333322211000 000000 00000000 0 011134678
Q ss_pred HHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
++++.+.+||..||..|++..+.+.|+||.-
T Consensus 232 ~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~ 262 (299)
T 3m2w_A 232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262 (299)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred HHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence 9999999999999999999999999999943
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-25 Score=217.29 Aligned_cols=249 Identities=16% Similarity=0.137 Sum_probs=160.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||+|+......... + .+. +..
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~-----------------------------~~~------~~~ 54 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--E-----------------------------KQM------LVS 54 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHH--H-----------------------------HHH------HHH
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHH--H-----------------------------HHH------HHH
Confidence 789999999999999998999999999875421110 0 011 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee----cCCCCceEEEeecCCCCcCcHHHHHhc---CCCH--HHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW----DYTSGKVLTMEWVEGVKLNEQVAIESQ---GLKV--LDLVNTGIQCSLRQL 284 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~----~~~~~~~LvmE~~~G~~L~~~~~~~~~---~~~~--~~~~~~~i~~~l~~l 284 (487)
|...+.++ .+++ +.+++. ......++||||++|++|.++...... ..+. ...+..++..++.++
T Consensus 55 e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l 127 (279)
T 2w5a_A 55 EVNLLREL-----KHPN--IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127 (279)
T ss_dssp HHHHHHHC-----CCTT--BCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-----CCCC--CCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 33322222 1222 222222 223557899999999999987654321 1343 345567788899999
Q ss_pred HHCC-----ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 285 LEYG-----YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 285 h~~g-----ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
|+.| ++|+|+||+||+++.+|.++|+|||++..+...... ......+..+..||. ...+..+++.|+||
T Consensus 128 H~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~s 201 (279)
T 2w5a_A 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKTFVGTPYYMSPEQ-----MNRMSYNEKSDIWS 201 (279)
T ss_dssp HHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHH-HHHHHSCCTTCCHHH-----HHCC-CCHHHHHHH
T ss_pred hcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccccc-ccccCCCccccChHH-----hccCCCCchhhHHH
Confidence 9999 999999999999999999999999998776543211 011111222334443 34444567789999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhc
Q 011399 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+|+.+++++++. .++...+...+...+.. + ..+.+ .
T Consensus 202 lG~il~~l~~g~--~p~~~~~~~~~~~~i~~------------------------~----~~~~~--------------~ 237 (279)
T 2w5a_A 202 LGCLLYELCALM--PPFTAFSQKELAGKIRE------------------------G----KFRRI--------------P 237 (279)
T ss_dssp HHHHHHHHHHSS--CSSCCSSHHHHHHHHHH------------------------T----CCCCC--------------C
T ss_pred HHHHHHHHHHCC--CCCcccCHHHHHHHHhh------------------------c----ccccC--------------C
Confidence 999999999843 44544443332222111 0 00000 1
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
...++.+++.+.+||..||..|++..+.+.|+|+.-.
T Consensus 238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 1346788889999999999999999999999888544
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-26 Score=222.37 Aligned_cols=183 Identities=13% Similarity=0.174 Sum_probs=122.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+. ++..||||+++...... + ++.+
T Consensus 30 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----------------------------------~------~~~~ 68 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE----------------------------------D------EFIE 68 (283)
T ss_dssp EECC---CEEEEEEEET-TTEEEEEEEECTTSBCH----------------------------------H------HHHH
T ss_pred hhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCH----------------------------------H------HHHH
Confidence 78999999999999987 88899999997542110 0 0122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (487)
|++.+.++. +++ +++++ .......++||||++|++|.++........+.. ..+..++..++.+||+.|+
T Consensus 69 E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 141 (283)
T 3gen_A 69 EAKVMMNLS-----HEK--LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141 (283)
T ss_dssp HHHHHHTCC-----CTT--BCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCC-----CCC--EeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 222222221 222 22332 233456799999999999988754433444443 3445778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++..+.........+...+..+..||. ...+..++++|+||+|+.++++++
T Consensus 142 ~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Dv~slG~~l~~l~t 216 (283)
T 3gen_A 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV-----LMYSKFSSKSDIWAFGVLMWEIYS 216 (283)
T ss_dssp CCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHH-----HHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred cCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHH-----hccCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999998775543221111111122334444 344455778999999999999986
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.9e-26 Score=221.13 Aligned_cols=246 Identities=17% Similarity=0.121 Sum_probs=155.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..++..||+|+........ .+. +. +..
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~--~~~-----------------------------~~------~~~ 74 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SER-----------------------------QR------FKE 74 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHH-----------------------------HH------HHH
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCH--HHH-----------------------------HH------HHH
Confidence 57999999999999999899999999986432111 000 11 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee---c---CCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW---D---YTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLL 285 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~---~---~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh 285 (487)
|+..+.++ .+++ +.+++. . .....++||||++|++|.++.... ...+. ...+..++..++.|||
T Consensus 75 e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH 146 (290)
T 1t4h_A 75 EAEMLKGL-----QHPN--IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH 146 (290)
T ss_dssp HHHHHTTC-----CCTT--BCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-----CCCC--eeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 22222111 1122 222221 1 123368999999999998875432 23343 3445678888999999
Q ss_pred HCC--ccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 011399 286 EYG--YFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 286 ~~g--ivH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~ 362 (487)
+.| ++|+|+||+||+++ .+|.++|+|||++............+ +..+..||. .. +..+++.|+||+|+
T Consensus 147 ~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~---t~~y~aPE~-----~~-~~~~~~~Di~slG~ 217 (290)
T 1t4h_A 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIG---TPEFMAPEM-----YE-EKYDESVDVYAFGM 217 (290)
T ss_dssp TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCS---SCCCCCGGG-----GG-TCCCTHHHHHHHHH
T ss_pred cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccC---CcCcCCHHH-----Hh-ccCCCcchHHHHHH
Confidence 999 99999999999998 78999999999987554332111111 112233332 22 34577889999999
Q ss_pred HHHHHHHHhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 363 ALRNFFDDALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
.+++++++. .|+.... .......+ .....| ......
T Consensus 218 ~l~~l~~g~--~pf~~~~~~~~~~~~~----------------------------~~~~~~-------------~~~~~~ 254 (290)
T 1t4h_A 218 CMLEMATSE--YPYSECQNAAQIYRRV----------------------------TSGVKP-------------ASFDKV 254 (290)
T ss_dssp HHHHHHHSS--CTTTTCSSHHHHHHHH----------------------------TTTCCC-------------GGGGGC
T ss_pred HHHHHHhCC--CCCCCcCcHHHHHHHH----------------------------hccCCc-------------cccCCC
Confidence 999998843 2332211 11111000 000001 001123
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.++.+++.+.+||..||..|++..+.+.|+||.-+
T Consensus 255 ~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 255 AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 46789999999999999999999999999999753
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=222.02 Aligned_cols=258 Identities=17% Similarity=0.198 Sum_probs=156.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+. +|+.||||++....... ...+. +.+
T Consensus 62 ~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~-------------------------------~~~~~------~~~ 103 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADN-------------------------------QTLDS------YRN 103 (390)
T ss_dssp EEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCH-------------------------------HHHHH------HHH
T ss_pred EEEccCCCeEEEEEEcC-CCCEEEEEEEecccccH-------------------------------HHHHH------HHH
Confidence 78999999999999987 69999999986442110 00011 233
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++.+ .++. +.+++ .......++||| +.|++|.++.... ...+. ...+..++..+|.|||+.||
T Consensus 104 Ei~~l~~l~~---~~~~--iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i 176 (390)
T 2zmd_A 104 EIAYLNKLQQ---HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGI 176 (390)
T ss_dssp HHHHHHHHTT---TCTT--BCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHccc---CCCe--EEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3333333322 1222 23333 334456799999 5677888774432 23443 34556788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHH-HHHHHHHhcCHHHHHHHH------HHcCCCCCCCCcchHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARDY------YALDFLSPDVDVTPIVP 362 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~g~~~~~~Di~sl~~ 362 (487)
+||||||+|||++ +|.+||+|||+++.+......... ....+..+..||.+.... ...+..++++|+||+|+
T Consensus 177 vHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGv 255 (390)
T 2zmd_A 177 VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255 (390)
T ss_dssp CCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHH
T ss_pred eecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHH
Confidence 9999999999995 689999999999987654321110 111223344455432100 00134577889999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+++++++. .|+...... ...+. ..+++..... .....
T Consensus 256 il~ell~G~--~Pf~~~~~~--~~~~~----------------------------~~~~~~~~~~----------~~~~~ 293 (390)
T 2zmd_A 256 ILYYMTYGK--TPFQQIINQ--ISKLH----------------------------AIIDPNHEIE----------FPDIP 293 (390)
T ss_dssp HHHHHHHSS--CTTTTCCCH--HHHHH----------------------------HHHCTTSCCC----------CCCCS
T ss_pred HHHHHHHCC--CcchhhhHH--HHHHH----------------------------HHhCccccCC----------CCccc
Confidence 999998743 233221100 00000 0011111100 01123
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
++.+++.+.+||..||..|++..+.+.|+||.....+
T Consensus 294 ~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~ 330 (390)
T 2zmd_A 294 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330 (390)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC--
T ss_pred hHHHHHHHHHHcccChhhCCCHHHHhhCcCccccCcc
Confidence 5778899999999999999999999999999765544
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.5e-26 Score=224.39 Aligned_cols=226 Identities=17% Similarity=0.243 Sum_probs=138.7
Q ss_pred cccccccccEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|++..+|+ .||||+++........ + +
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------~------~ 96 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--------------------------------R------D 96 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHH--------------------------------H------H
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHH--------------------------------H------H
Confidence 789999999999999975554 5999999754322110 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE 286 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~ 286 (487)
+.+|+..+.++ .+++ +++++ .......++||||++|++|.++........+.. ..+..++..+|.|||+
T Consensus 97 ~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~ 169 (325)
T 3kul_A 97 FLSEASIMGQF-----DHPN--IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169 (325)
T ss_dssp HHHHHHHHTTC-----CCTT--BCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-----CCCC--CCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222 1222 22222 223456789999999999988854333344443 3445778889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
.|++||||||+|||++.+|.++|+|||++..+....... ..+...+..+..||.+ ..+..++++|+||+|+.+
T Consensus 170 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~-----~~~~~~~~~Di~slG~il 244 (325)
T 3kul_A 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI-----AFRTFSSASDVWSFGVVM 244 (325)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHH-----HHCEECHHHHHHHHHHHH
T ss_pred CCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHh-----cCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999998775542110 0011111224445543 344457789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSL 410 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l 410 (487)
+++++. ...++...+...+...+.... ...+...|+.+..+++.+
T Consensus 245 ~ell~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 290 (325)
T 3kul_A 245 WEVLAY-GERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDC 290 (325)
T ss_dssp HHHHTT-SCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred HHHHcC-CCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHH
Confidence 999871 124555555555444433211 112233455554444433
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-25 Score=213.97 Aligned_cols=193 Identities=20% Similarity=0.208 Sum_probs=116.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++ +|+.||||+.+........... +. +.+
T Consensus 13 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~-----------------------------~~------~~~ 55 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTI-----------------------------EN------VRQ 55 (271)
T ss_dssp EEEEEETTEEEEEEEE--TTEEEEEEEC----------CH-----------------------------HH------HHH
T ss_pred eeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHH-----------------------------HH------HHH
Confidence 6899999999999997 5899999998744222110000 11 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCC---
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYG--- 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~g--- 288 (487)
|...+..+ .++++.-..-+.......++||||++|++|.++.. ....+. ...+..++..++.+||+.|
T Consensus 56 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~ 128 (271)
T 3dtc_A 56 EAKLFAML-----KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVP 128 (271)
T ss_dssp HHHHHHHC-----CCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHhc-----CCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 22222222 12332211112233456799999999999987743 334443 3445577888999999999
Q ss_pred ccccCCCCCCeEEcC--------CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 289 YFHADPHPGNLLATP--------EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 289 ivH~Dlkp~Nili~~--------~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
++|+|+||+||+++. ++.++|+|||++..+......... .+..+..||. ...+..+++.|+||+
T Consensus 129 i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~---~~~~y~aPE~-----~~~~~~~~~~Di~sl 200 (271)
T 3dtc_A 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA---GAYAWMAPEV-----IRASMFSKGSDVWSY 200 (271)
T ss_dssp CCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------CCGGGSCHHH-----HHHCCCSHHHHHHHH
T ss_pred eeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCC---CccceeCHHH-----hccCCCCchhhHHHH
Confidence 899999999999986 678999999999877654332222 1223344444 334455778999999
Q ss_pred HHHHHHHHHHhccCCCCcCc
Q 011399 361 VPALRNFFDDALNSSVSELN 380 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~ 380 (487)
|+.+++++++. .|+...+
T Consensus 201 G~~l~~l~~g~--~p~~~~~ 218 (271)
T 3dtc_A 201 GVLLWELLTGE--VPFRGID 218 (271)
T ss_dssp HHHHHHHHHCC--CTTTTSC
T ss_pred HHHHHHHHhCC--CCCCCCC
Confidence 99999999843 3444433
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-26 Score=222.56 Aligned_cols=257 Identities=15% Similarity=0.111 Sum_probs=149.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|++..+|+.||||+........ ....+...+..+....|++
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~e~~~l~~l~h~~-------------------- 74 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT------SMDELLKEIQAMSQCHHPN-------------------- 74 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC----------------------CCCCCCCTT--------------------
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcch------hHHHHHHHHHHHhhcCCCC--------------------
Confidence 78999999999999988889999999986432110 0001111111111112222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-------hcCCCH--HHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-------SQGLKV--LDLVNTGIQCSLR 282 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-------~~~~~~--~~~~~~~i~~~l~ 282 (487)
+++++ .......++||||++|++|.++.... ....+. ...+..++..++.
T Consensus 75 -------------------i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 135 (303)
T 2vwi_A 75 -------------------IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135 (303)
T ss_dssp -------------------BCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHH
T ss_pred -------------------EeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHH
Confidence 22222 23345678999999999998875431 112333 3445578888999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH---HH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF---AI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
+||+.|++|+|+||+||+++.+|.++|+|||++..+...... .. .....+..+..||.+.. .+..+++.|+|
T Consensus 136 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~Di~ 211 (303)
T 2vwi_A 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ----VRGYDFKADIW 211 (303)
T ss_dssp HHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHH----HHCCCTHHHHH
T ss_pred HHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhcc----ccCCCchhhHH
Confidence 999999999999999999999999999999998766433110 00 01111222445554322 12347789999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
|+|+.+++++++. .++...+..... .......+ |.... .......
T Consensus 212 slG~il~~l~~g~--~pf~~~~~~~~~---~~~~~~~~-------------------------~~~~~-----~~~~~~~ 256 (303)
T 2vwi_A 212 SFGITAIELATGA--APYHKYPPMKVL---MLTLQNDP-------------------------PSLET-----GVQDKEM 256 (303)
T ss_dssp HHHHHHHHHHHSS--CTTTTSCGGGHH---HHHHTSSC-------------------------CCTTC----------CC
T ss_pred HHHHHHHHHHhCC--CCCccCchhhHH---HHHhccCC-------------------------Ccccc-----ccccchh
Confidence 9999999999843 333332211111 00111100 10000 0001122
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
....++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 257 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~ 292 (303)
T 2vwi_A 257 LKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292 (303)
T ss_dssp CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-
T ss_pred hhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhh
Confidence 345678899999999999999999999999999995
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-25 Score=225.64 Aligned_cols=201 Identities=13% Similarity=0.097 Sum_probs=134.3
Q ss_pred cccccccccEEEEEEEcc--------CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY--------SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~--------~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.||+|+||.||+|++.. +|+.||||+.+.. +.+..++.+++.+ .|+|++.+++
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l----------~h~niv~~~~------ 109 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRA----------AKPLQVNKWK------ 109 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHH----------CCHHHHHHHH------
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHh----------cccchhhhhh------
Confidence 789999999999999986 3899999999754 2233344433332 2555555444
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecC---CCCceEEEeecCCCCcCcHHHHH-hcCCCH--HHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY---TSGKVLTMEWVEGVKLNEQVAIE-SQGLKV--LDLVNTGIQC 279 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~--~~~~~~~i~~ 279 (487)
.+...+...+|.++... ....++||||+ |++|.++.... ....+. ...+..++..
T Consensus 110 ------------------~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 170 (352)
T 2jii_A 110 ------------------KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLD 170 (352)
T ss_dssp ------------------HHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHH
T ss_pred ------------------hhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHH
Confidence 33344555566665422 45679999999 99999886542 133443 3455678888
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCC--cEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEG--KLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g--~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
+|.|||+.|++|||+||+||+++.++ .++|+|||++..+........ .........+++..++++...-+..++++|
T Consensus 171 ~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 250 (352)
T 2jii_A 171 ALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSD 250 (352)
T ss_dssp HHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHH
T ss_pred HHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhh
Confidence 99999999999999999999999998 899999999987754321000 000000012223334444444445677899
Q ss_pred cchHHHHHHHHHHHh
Q 011399 357 VTPIVPALRNFFDDA 371 (487)
Q Consensus 357 i~sl~~~l~~~~~~~ 371 (487)
+||+|+.+++++++.
T Consensus 251 i~slG~il~el~~g~ 265 (352)
T 2jii_A 251 LQSLGYCMLKWLYGF 265 (352)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999843
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-26 Score=228.77 Aligned_cols=290 Identities=14% Similarity=0.095 Sum_probs=159.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH--HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE--AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~--~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|+||+||+|++..+|+.||||+++..... ....++.+++.+.
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~------------------------------- 73 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVN------------------------------- 73 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHH-------------------------------
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhh-------------------------------
Confidence 7899999999999999889999999999754211 1111111111111
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecC------CCCceEEEeecCCCCcCcHHHHH-hcCCCH--HHHHHHHHHHHHH
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDY------TSGKVLTMEWVEGVKLNEQVAIE-SQGLKV--LDLVNTGIQCSLR 282 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~--~~~~~~~i~~~l~ 282 (487)
+..........+++ +++++..+ ....++||||+ |++|.++.... ..+.+. ...+..++..+|.
T Consensus 74 -----~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 145 (373)
T 1q8y_A 74 -----DADNTKEDSMGANH--ILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145 (373)
T ss_dssp -----HTCCSHHHHHHHTT--BCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred -----cccccchhccccch--HHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHH
Confidence 00000000000111 12222111 12568999999 88888775432 223443 3445678888999
Q ss_pred HHHHC-CccccCCCCCCeEEcC------CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 011399 283 QLLEY-GYFHADPHPGNLLATP------EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV 355 (487)
Q Consensus 283 ~lh~~-givH~Dlkp~Nili~~------~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (487)
|||+. |++||||||+|||++. .+.++|+|||++..+...... ...+..+..||. ..-+..++++
T Consensus 146 ~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~t~~y~aPE~-----~~~~~~~~~~ 216 (373)
T 1q8y_A 146 YMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTN----SIQTREYRSPEV-----LLGAPWGCGA 216 (373)
T ss_dssp HHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCS----CCSCGGGCCHHH-----HHTCCCCTHH
T ss_pred HHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCC----CCCCccccCcHH-----HhCCCCCchH
Confidence 99998 9999999999999953 347999999999876543110 011223344444 4445568889
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCc---HHHHHHHHHHHHhhCCCCCChHHHHHHHHH---HHHHHhhhhhCCCCChHHh
Q 011399 356 DVTPIVPALRNFFDDALNSSVSELN---FKTIVDGLGAVLYQYPFNVPAYYALILRSL---TVLEGLALYADPNFKVLAA 429 (487)
Q Consensus 356 Di~sl~~~l~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l---~~leg~~~~ldP~~~~~~~ 429 (487)
|+||+|+.+++++++. .++...+ +......+..+... .-..|+.+..-.+.. ..-.+..... ........
T Consensus 217 Di~slG~il~el~~g~--~pf~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 292 (373)
T 1q8y_A 217 DIWSTACLIFELITGD--FLFEPDEGHSYTKDDDHIAQIIEL-LGELPSYLLRNGKYTRTFFNSRGLLRNI-SKLKFWPL 292 (373)
T ss_dssp HHHHHHHHHHHHHHSS--CCC---------CHHHHHHHHHHH-HCSCCHHHHHHCTTHHHHBCC--CBSSC-CCCCBCCH
T ss_pred hHHHHHHHHHHHHhCC--CCCCCCcccccCChHHHHHHHHHh-cCCCCHHHHhccchhhhhcCCcchhccc-ccccccch
Confidence 9999999999999854 3333221 11111111111111 123444332111100 0000000000 00000000
Q ss_pred HhHHHHHHhc--cCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 430 SYPYFAKRLL--TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 430 ~~p~~~~~l~--~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
...+..... ...++++++.+.+||..||..|++..+.+.|+||.-.
T Consensus 293 -~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 293 -EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340 (373)
T ss_dssp -HHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred -hhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence 001111110 1224678899999999999999999999999999643
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-26 Score=236.52 Aligned_cols=252 Identities=13% Similarity=0.069 Sum_probs=147.4
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.+.||+|+||+||.+... +|+.||||++.....+....++.+++.+. .|+|++.++
T Consensus 20 ~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~~~~~~~~E~~~l~~l~---------~HpnIv~~~-------------- 75 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESD---------DHPNVIRYY-------------- 75 (434)
T ss_dssp EEEEEECSTTCEEEEEES-SSSEEEEEEEEGGGHHHHHHHHHHHHHHT---------TSTTBCCEE--------------
T ss_pred cCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHHHHHHHHHHHHHHHhcc---------CCCCcCeEE--------------
Confidence 477999999999876554 89999999987543222222221111100 122222211
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--------HHHHHHHHHHHHHHHH
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--------VLDLVNTGIQCSLRQL 284 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--------~~~~~~~~i~~~l~~l 284 (487)
-+.......++|||||+| +|.++......... ....+..++..||.||
T Consensus 76 -----------------------~~~~~~~~~~lv~E~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 131 (434)
T 2rio_A 76 -----------------------CSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131 (434)
T ss_dssp -----------------------EEEECSSEEEEEECCCSE-EHHHHHHTC------------CCHHHHHHHHHHHHHHH
T ss_pred -----------------------EEEecCCeEEEEEecCCC-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH
Confidence 112233556899999975 88877432211111 1123667888999999
Q ss_pred HHCCccccCCCCCCeEEcCC-------------CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc---
Q 011399 285 LEYGYFHADPHPGNLLATPE-------------GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL--- 348 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~-------------g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 348 (487)
|+.|++|||+||+|||++.+ +.++|+|||++..+......... ......+++..+++++...
T Consensus 132 H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~ 209 (434)
T 2rio_A 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT--NLNNPSGTSGWRAPELLEESNN 209 (434)
T ss_dssp HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC----------------CCTTSCHHHHSCCCT
T ss_pred HHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCcccee--eecCCCCCCCccCHHHhccccc
Confidence 99999999999999999754 47999999999987654211000 0011112233334444322
Q ss_pred ----CCCCCCCCcchHHHHHHHHHH-HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCC
Q 011399 349 ----DFLSPDVDVTPIVPALRNFFD-DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPN 423 (487)
Q Consensus 349 ----g~~~~~~Di~sl~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~ 423 (487)
+..++++|+||+|+.++++++ +. .|+....... ..+... .... +.
T Consensus 210 ~~~~~~~~~~~DiwSlG~il~ellt~g~--~Pf~~~~~~~-----~~i~~~-~~~~----------------------~~ 259 (434)
T 2rio_A 210 LQTKRRLTRSIDIFSMGCVFYYILSKGK--HPFGDKYSRE-----SNIIRG-IFSL----------------------DE 259 (434)
T ss_dssp TSCCCCCCTHHHHHHHHHHHHHHHTTSC--CTTCSTTTHH-----HHHHHT-CCCC----------------------CC
T ss_pred cccccCcchhhhhHhHHHHHHHHHhCCC--CCCCCchhhH-----HHHhcC-CCCc----------------------cc
Confidence 445778999999999999987 32 2332211110 000000 0000 00
Q ss_pred CChHHhHhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 424 FKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 424 ~~~~~~~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
..... .+ ..++++++.+.+||..||..|++..+.+.|+||.
T Consensus 260 ~~~~~--~~--------~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~ 300 (434)
T 2rio_A 260 MKCLH--DR--------SLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300 (434)
T ss_dssp CTTCC--CH--------HHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred ccccc--cc--------cchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence 00000 00 1136778899999999999999999999999994
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=219.93 Aligned_cols=227 Identities=18% Similarity=0.235 Sum_probs=133.2
Q ss_pred CcccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 133 PSPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
.+.||+|+||+||+|+++ .+|..||||+.+.+...... +
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------------~------ 91 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--------------------------------R------ 91 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHH--------------------------------H------
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHH--------------------------------H------
Confidence 378999999999999986 46788999998754322100 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLL 285 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh 285 (487)
++.+|+..+.++ .+++ +++++ .......++||||++|++|.++........+... .+..++..+|.|||
T Consensus 92 ~~~~E~~~l~~l-----~h~n--iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH 164 (373)
T 2qol_A 92 DFLGEASIMGQF-----DHPN--IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164 (373)
T ss_dssp HHHHHHHHHTTC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-----CCCC--CCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 122233222222 1222 22222 2334567999999999999988543333344433 44577888999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH--HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI--IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+.|++|||+||+|||++.+|.+||+|||+++.+........ .+......+..||.+ ..+..++++|+||+|+.
T Consensus 165 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Dv~SlG~i 239 (373)
T 2qol_A 165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI-----AYRKFTSASDVWSYGIV 239 (373)
T ss_dssp HTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHH-----HHCCCCHHHHHHHHHHH
T ss_pred HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhh-----ccCCcCchhcHHHHHHH
Confidence 99999999999999999999999999999988755422111 111111234455543 34555778999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHHHHH
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALILRSL 410 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~r~l 410 (487)
++++++. ...|+...+...+...+..... ..+...|+.+..+++.+
T Consensus 240 l~ellt~-g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~c 286 (373)
T 2qol_A 240 LWEVMSY-GERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286 (373)
T ss_dssp HHHHHTT-C-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHH
T ss_pred HHHHHhC-CCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHH
Confidence 9998861 1245555555554443322111 12234555555554444
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.9e-25 Score=216.09 Aligned_cols=254 Identities=16% Similarity=0.119 Sum_probs=143.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++....... ..+.+..+..+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~------------------------------- 77 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEE--NKRILMDLDVV------------------------------- 77 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHH--HHHHHHHHHHH-------------------------------
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchH--HHHHHHHHHHH-------------------------------
Confidence 689999999999999988999999999975422110 01111111100
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC-Ccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY-GYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~-giv 290 (487)
.... .++++.-..-+.......++||||+ |+.+..+........+... .+..++..++.|+|+. |++
T Consensus 78 --------~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~ 147 (318)
T 2dyl_A 78 --------LKSH-DCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVI 147 (318)
T ss_dssp --------HHTT-TCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred --------HHhc-CCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEE
Confidence 1111 2222211111223345679999999 5455544333233444433 4557788899999995 999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|+|+||+||+++.+|.++|+|||++..+...... .....+..+..||.+.......+..++++|+||+|+.+++++++
T Consensus 148 H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g 225 (318)
T 2dyl_A 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK--DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225 (318)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTC----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHS
T ss_pred eCCCCHHHEEECCCCCEEEEECCCchhccCCccc--cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhC
Confidence 9999999999999999999999999876543221 11122334455665432111233457789999999999999984
Q ss_pred hccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 371 ALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 371 ~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
. .|+.... ...... ...... .|.+. .....++.+++.
T Consensus 226 ~--~pf~~~~~~~~~~~---~~~~~~-------------------------~~~~~------------~~~~~~~~l~~l 263 (318)
T 2dyl_A 226 Q--FPYKNCKTDFEVLT---KVLQEE-------------------------PPLLP------------GHMGFSGDFQSF 263 (318)
T ss_dssp S--CTTTTCCSHHHHHH---HHHHSC-------------------------CCCCC------------SSSCCCHHHHHH
T ss_pred C--CCCCCCCccHHHHH---HHhccC-------------------------CCCCC------------ccCCCCHHHHHH
Confidence 3 3333211 111111 111110 01100 001346788889
Q ss_pred HHHHHhhcCcccccccchhhccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+.+||..||..|++..+.+.|+||.
T Consensus 264 i~~~l~~dp~~Rps~~~ll~h~~~~ 288 (318)
T 2dyl_A 264 VKDCLTKDHRKRPKYNKLLEHSFIK 288 (318)
T ss_dssp HHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred HHHHccCChhHCcCHHHHhhCHHHH
Confidence 9999999999999999999999983
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-25 Score=219.81 Aligned_cols=250 Identities=12% Similarity=0.078 Sum_probs=156.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..||+|+||+||+|++..+|+.||||+.+....... +. +..
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---------------------------------~~------~~~ 68 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---------------------------------QP------LHE 68 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------------------------------------HH------HHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHH---------------------------------HH------HHH
Confidence 479999999999999988999999999865421110 00 111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhc--CCCHH--HHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQ--GLKVL--DLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~~--~~~~~~i~~~l~~lh~~ 287 (487)
|...+.++ .+++ +++++ ....+..++||||++|++|.++...... ..+.. ..+..++..++.++|+.
T Consensus 69 e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 141 (295)
T 2clq_A 69 EIALHKHL-----KHKN--IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141 (295)
T ss_dssp HHHHHHTC-----CCTT--BCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhC-----CCCC--EeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 12111111 1222 12222 2234567899999999999888554322 22333 33567888999999999
Q ss_pred CccccCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|++|+|+||+||+++. +|.++|+|||++..+....... .....+..+..||.+... ....+.+.|+||+|+.+++
T Consensus 142 ~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~---~~~~~~~~Di~slG~il~~ 217 (295)
T 2clq_A 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT-ETFTGTLQYMAPEIIDKG---PRGYGKAADIWSLGCTIIE 217 (295)
T ss_dssp TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCCCCCGGGCCHHHHHHG---GGGCSHHHHHHHHHHHHHH
T ss_pred CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc-cccCCCccccChhhhcCC---CCCCCcHHHHHHHHHHHHH
Confidence 9999999999999987 8999999999998765321100 000112234445544221 1114677899999999999
Q ss_pred HHHHhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 367 FFDDALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 367 ~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
++++. .++...+ ......... .....|.+ ....++.
T Consensus 218 l~~g~--~pf~~~~~~~~~~~~~~---------------------------~~~~~~~~--------------~~~~~~~ 254 (295)
T 2clq_A 218 MATGK--PPFYELGEPQAAMFKVG---------------------------MFKVHPEI--------------PESMSAE 254 (295)
T ss_dssp HHHTS--CTTGGGSSHHHHHHHHH---------------------------HHCCCCCC--------------CTTSCHH
T ss_pred HHHCC--CCccCCCchhHHHHhhc---------------------------cccccccc--------------cccCCHH
Confidence 99843 2332211 110000000 00111211 1235678
Q ss_pred HHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
+++.+.+||..||..|++..+.+.|+||...
T Consensus 255 ~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 285 (295)
T 2clq_A 255 AKAFILKCFEPDPDKRACANDLLVDEFLKVS 285 (295)
T ss_dssp HHHHHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred HHHHHHHHccCChhhCCCHHHHhcChhhhhc
Confidence 8899999999999999999999999999754
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-25 Score=215.14 Aligned_cols=183 Identities=16% Similarity=0.160 Sum_probs=124.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.++ ++..||||+++...... + ++.+
T Consensus 14 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----------------------------------~------~~~~ 52 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSE----------------------------------D------EFFQ 52 (268)
T ss_dssp EEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCH----------------------------------H------HHHH
T ss_pred eeeccCCCceEEEEEec-CceeEEEEEeccCCCcH----------------------------------H------HHHH
Confidence 78999999999999987 78899999997542111 0 0222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++. +++ +++++ .......++||||++|++|.++........+.. ..+..++..++.++|+.|+
T Consensus 53 E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 125 (268)
T 3sxs_A 53 EAQTMMKLS-----HPK--LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF 125 (268)
T ss_dssp HHHHHHHCC-----CTT--BCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhCC-----CCC--EeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 333333221 222 22222 233456789999999999998865544334443 4455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++............+......+..||.+ ..+..++++|+||+|+.++++++
T Consensus 126 ~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~ 200 (268)
T 3sxs_A 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVF-----HYFKYSSKSDVWAFGILMWEVFS 200 (268)
T ss_dssp EESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHH-----HHSEEETTHHHHHHHHHHHHHHT
T ss_pred ecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHH-----hccCCchhhhhHHHHHHHHHHHc
Confidence 9999999999999999999999999976643311000011011123445543 33345788999999999999986
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9e-25 Score=212.76 Aligned_cols=191 Identities=14% Similarity=0.139 Sum_probs=122.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+.+.............+ + .+.+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~--------------------------~------~~~~ 72 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF--------------------------Q------EFQR 72 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCS--------------------------H------HHHH
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHH--------------------------H------HHHH
Confidence 7899999999999999889999999998654221100000000 0 1222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCC--c
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYG--Y 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~g--i 289 (487)
|...+.++ .++ .+++++..+.+..++||||++|++|.+.........+.. ..+..++..++.|+|++| +
T Consensus 73 E~~~l~~l-----~h~--~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~i 145 (287)
T 4f0f_A 73 EVFIMSNL-----NHP--NIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145 (287)
T ss_dssp HHHHHTTC-----CCT--TBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHhC-----CCC--CchhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 22222222 122 244555555566789999999999977643333334443 345577888999999999 9
Q ss_pred cccCCCCCCeEEcCCCc-----EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 011399 290 FHADPHPGNLLATPEGK-----LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~-----i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l 364 (487)
+|+|+||+||+++.++. ++|+|||++......... ..+ +..+..||.+.. ..+..++++|+||+|+.+
T Consensus 146 vH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~g---~~~y~aPE~~~~---~~~~~~~~~Di~slG~~l 218 (287)
T 4f0f_A 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG-LLG---NFQWMAPETIGA---EEESYTEKADTYSFAMIL 218 (287)
T ss_dssp BCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEEC-CCC---CCTTSCGGGSSC---SSCEECHHHHHHHHHHHH
T ss_pred ecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccc-cCC---CccccCchhhcc---CCCCcCchhhHHHHHHHH
Confidence 99999999999998876 999999999865443110 011 111222322100 111234567999999999
Q ss_pred HHHHHH
Q 011399 365 RNFFDD 370 (487)
Q Consensus 365 ~~~~~~ 370 (487)
++++++
T Consensus 219 ~~l~~g 224 (287)
T 4f0f_A 219 YTILTG 224 (287)
T ss_dssp HHHHHS
T ss_pred HHHHcC
Confidence 999884
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-25 Score=217.68 Aligned_cols=194 Identities=20% Similarity=0.258 Sum_probs=120.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||+.+...... ....+. +.+
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------~~~~~~------~~~ 83 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD------------------------------PVFRTR------MQR 83 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS------------------------------HHHHHH------HHH
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC------------------------------HHHHHH------HHH
Confidence 78999999999999998899999999987442211 001111 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++ .+++ +++++ ....+..++||||++|++|.++.... ...+. ...+..++..++.|+|+.|+
T Consensus 84 e~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i 155 (309)
T 2h34_A 84 EARTAGRL-----QEPH--VVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAAGA 155 (309)
T ss_dssp HHHHHTTC-----CCTT--BCCEEEEEEETTEEEEEEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhc-----CCCC--eeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 22222211 1222 22222 23346678999999999998875432 23343 34556778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++................+..+..||. ..-+..+++.|+||+|+.++++++
T Consensus 156 ~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~slG~il~~l~~ 230 (309)
T 2h34_A 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPER-----FSESHATYRADIYALTCVLYECLT 230 (309)
T ss_dssp CCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGG-----TCC----CCCHHHHHHHHHHHHHH
T ss_pred CcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHH-----HcCCCCCchHhHHHHHHHHHHHHH
Confidence 999999999999999999999999998775543222212222223334443 333445778999999999999998
Q ss_pred HhccCCCCc
Q 011399 370 DALNSSVSE 378 (487)
Q Consensus 370 ~~~~~~~~~ 378 (487)
+. .++..
T Consensus 231 g~--~pf~~ 237 (309)
T 2h34_A 231 GS--PPYQG 237 (309)
T ss_dssp SS--CSSCS
T ss_pred CC--CCCCC
Confidence 43 34443
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-25 Score=223.13 Aligned_cols=188 Identities=20% Similarity=0.207 Sum_probs=119.3
Q ss_pred cccccccccEEEEEEE-----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQL-----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~-----~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|++ ..+++.||||+++........
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------- 118 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE-------------------------------------- 118 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHH--------------------------------------
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhH--------------------------------------
Confidence 6799999999999994 346789999998643222110
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh------cCCCH--HHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES------QGLKV--LDLVNTGIQCS 280 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~------~~~~~--~~~~~~~i~~~ 280 (487)
.++.+|+..+.++ .++++.-..-+.......++||||++|++|.++..... ...+. ...+..++..+
T Consensus 119 ~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a 193 (367)
T 3l9p_A 119 LDFLMEALIISKF-----NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193 (367)
T ss_dssp HHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----CCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHH
Confidence 0122233322222 12222111112233456799999999999998865432 12333 33456788889
Q ss_pred HHHHHHCCccccCCCCCCeEEcCCC---cEEEEecCCCCCCCHHHHHHHH-HHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPEG---KLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~g---~i~l~DFGla~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
|.|||+.||+||||||+|||++.+| .++|+|||+++.+......... ....+..+..|| ...-+..++++|
T Consensus 194 L~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE-----~~~~~~~~~~~D 268 (367)
T 3l9p_A 194 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE-----AFMEGIFTSKTD 268 (367)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHH-----HHHHCCCCHHHH
T ss_pred HHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHH-----HhcCCCCCcHHH
Confidence 9999999999999999999999665 4999999998643221000000 000012233444 334455678899
Q ss_pred cchHHHHHHHHHH
Q 011399 357 VTPIVPALRNFFD 369 (487)
Q Consensus 357 i~sl~~~l~~~~~ 369 (487)
+||+|+.++++++
T Consensus 269 vwslG~il~ellt 281 (367)
T 3l9p_A 269 TWSFGVLLWEIFS 281 (367)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999986
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-25 Score=221.05 Aligned_cols=256 Identities=18% Similarity=0.135 Sum_probs=147.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.++.+|+.||||+++....... ....++.+..+. ....|+|++.+++
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~e~~~~~---~~~~h~niv~~~~-------------- 88 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKE--QKQLLMDLDVVM---RSSDCPYIVQFYG-------------- 88 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHH--HHHHHHHHHHHH---SSCCCTTBCCEEE--------------
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchH--HHHHHHHHHHHH---HcCCCCcEeeeee--------------
Confidence 679999999999999988999999999976532211 001111111110 0111222222111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH----hcCCCH--HHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE----SQGLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~----~~~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
+....+..++||||++| +|.++.... ....+. ...+..++..++.++|+.
T Consensus 89 -----------------------~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 144 (327)
T 3aln_A 89 -----------------------ALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144 (327)
T ss_dssp -----------------------EEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------EEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc
Confidence 12234567899999997 665543321 122333 334557788899999999
Q ss_pred -CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 -GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 -givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|++|+|+||+||+++.+|.++|+|||++..+....... ....+..+..||.+.... ..+..++++|+||+|+.+++
T Consensus 145 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~-~~~~~~~~~Di~slG~il~~ 221 (327)
T 3aln_A 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT--RDAGCRPYMAPERIDPSA-SRQGYDVRSDVWSLGITLYE 221 (327)
T ss_dssp HSCCCSCCCGGGEEEETTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHH
T ss_pred CCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccc--cCCCCccccCceeecccc-CcCCCCchhhHHHHHHHHHH
Confidence 99999999999999999999999999998875542211 111122233333331110 22334778899999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++. .++...+. .. ..........+ |.+. .......++.+
T Consensus 222 l~~g~--~pf~~~~~--~~----~~~~~~~~~~~---------------------~~~~----------~~~~~~~~~~l 262 (327)
T 3aln_A 222 LATGR--FPYPKWNS--VF----DQLTQVVKGDP---------------------PQLS----------NSEEREFSPSF 262 (327)
T ss_dssp HHHSC--CCSSCC-------------CCCCCSCC---------------------CCCC----------CCSSCCCCHHH
T ss_pred HHHCC--CCCCCcch--HH----HHHHHHhcCCC---------------------CCCC----------CcccccCCHHH
Confidence 99843 34333211 00 00000000111 1110 00112457888
Q ss_pred HHHHHHHHhhcCcccccccchhhccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
++.+.+||..||..|++..+.+.|+||.
T Consensus 263 ~~li~~~l~~dp~~Rps~~ell~hp~~~ 290 (327)
T 3aln_A 263 INFVNLCLTKDESKRPKYKELLKHPFIL 290 (327)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred HHHHHHHhhCChhhCcCHHHHHhChHHH
Confidence 9999999999999999999999999994
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-25 Score=215.24 Aligned_cols=253 Identities=14% Similarity=0.173 Sum_probs=163.4
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|... +.||+|++|.||+|++..+|+.||||+.+...... .... .
T Consensus 22 ~~y~i~--~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~-----------------------~~~~--------~- 67 (287)
T 2wei_A 22 ERYNIV--CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-----------------------KDTS--------T- 67 (287)
T ss_dssp HHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS-----------------------SCHH--------H-
T ss_pred hcceee--EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch-----------------------HHHH--------H-
Confidence 445555 78999999999999998899999999986431110 0000 1
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSL 281 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l 281 (487)
+.+|...+.++ .++. +++++ .......++||||++|++|.+.... ....+. ...+..++..++
T Consensus 68 -----~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l 134 (287)
T 2wei_A 68 -----ILREVELLKKL-----DHPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGI 134 (287)
T ss_dssp -----HHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhc-----cCCC--ccEEEEEEeCCCeEEEEEEccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 11222222222 1222 22222 2234567899999999999776432 223443 344557788899
Q ss_pred HHHHHCCccccCCCCCCeEEcCC---CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 282 RQLLEYGYFHADPHPGNLLATPE---GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~---g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
.+||+.|++|+|+||+||+++.+ +.++|+|||++......... .....+..+..||.+ .|..+++.|+|
T Consensus 135 ~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~------~~~~~~~~Di~ 206 (287)
T 2wei_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIAPEVL------RGTYDEKCDVW 206 (287)
T ss_dssp HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC--SCHHHHHTTCCHHHH------TTCCCTHHHHH
T ss_pred HHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc--ccccCcccccChHHh------cCCCCCchhhH
Confidence 99999999999999999999764 46999999998765432110 111223445566643 24467889999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
|+|+.+++++++. .++...+...+...+.. .... +.. ..
T Consensus 207 slG~~l~~l~~g~--~p~~~~~~~~~~~~~~~----~~~~-------------------------~~~----------~~ 245 (287)
T 2wei_A 207 SAGVILYILLSGT--PPFYGKNEYDILKRVET----GKYA-------------------------FDL----------PQ 245 (287)
T ss_dssp HHHHHHHHHHHSS--CSSCCSSHHHHHHHHHH----CCCC-------------------------CCS----------GG
T ss_pred hHHHHHHHHHhCC--CCCCCCCHHHHHHHHHc----CCCC-------------------------CCc----------hh
Confidence 9999999999843 34444443322222111 0000 000 00
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
....++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 246 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~ 281 (287)
T 2wei_A 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281 (287)
T ss_dssp GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred hhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHh
Confidence 123567889999999999999999999999999984
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-26 Score=229.26 Aligned_cols=279 Identities=12% Similarity=0.043 Sum_probs=160.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++ +|+.||||+.+.......... .............. +. +.+
T Consensus 37 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~------------~~~~~~~~~~~~~~----~~------~~~ 92 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDF------------TKSNNDKISIKSKY----DD------FKN 92 (348)
T ss_dssp EEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEE------------CCCSSSSCCEEEHH----HH------HHH
T ss_pred EEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhh------------ccccchhhhHHhHH----HH------HHH
Confidence 6799999999999998 899999999873311100000 00000000000000 11 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcH------HHHH-hcCCCH--HHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ------VAIE-SQGLKV--LDLVNTGIQCSLRQL 284 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~------~~~~-~~~~~~--~~~~~~~i~~~l~~l 284 (487)
|+..+.++ .++++.-..-+.......++||||++|++|.++ .... ....+. ...+..++..++.|+
T Consensus 93 E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l 167 (348)
T 2pml_X 93 ELQIITDI-----KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI 167 (348)
T ss_dssp HHHHHTTC-----CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-----CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 22222222 122222111122334667999999999999886 3221 222333 344567888899999
Q ss_pred HH-CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCC-CCCcchHH
Q 011399 285 LE-YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSP-DVDVTPIV 361 (487)
Q Consensus 285 h~-~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~-~~Di~sl~ 361 (487)
|+ .|++|+|+||+||+++.+|.++|+|||++............+ +..+..||. ...+ ..+. ++|+||+|
T Consensus 168 H~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~---~~~y~aPE~-----~~~~~~~~~~~~Di~slG 239 (348)
T 2pml_X 168 HNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRG---TYEFMPPEF-----FSNESSYNGAKVDIWSLG 239 (348)
T ss_dssp HHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCS---CGGGCCGGG-----GSSCCCEEHHHHHHHHHH
T ss_pred hccCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCC---CcCccCchh-----hcCCCCCCcchhhHHHHH
Confidence 99 999999999999999999999999999998764331111111 122333332 2222 2223 78999999
Q ss_pred HHHHHHHHHhccCCCCcCcH-HHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 362 PALRNFFDDALNSSVSELNF-KTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
+.+++++++. .++...+. ......+ .......|.... ....+... ........
T Consensus 240 ~il~~l~~g~--~pf~~~~~~~~~~~~i----~~~~~~~~~~~~-------------~~~~~~~~-------~~~~~~~~ 293 (348)
T 2pml_X 240 ICLYVMFYNV--VPFSLKISLVELFNNI----RTKNIEYPLDRN-------------HFLYPLTN-------KKSTCSNN 293 (348)
T ss_dssp HHHHHHHHSS--CSSCCSSCSHHHHHHH----TSCCCCCCCSSS-------------SSTTTTCC---------------
T ss_pred HHHHHHHhCC--CCCCCCCcHHHHHHHH----hccCcCCccchh-------------hhhccccc-------cccccchh
Confidence 9999999853 33333222 2222222 222222221100 00001000 00112224
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
..++.+++.+.+||..||..|++..+.+.|+||.-
T Consensus 294 ~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 328 (348)
T 2pml_X 294 FLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328 (348)
T ss_dssp CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred hcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence 56889999999999999999999999999999964
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-25 Score=213.24 Aligned_cols=186 Identities=15% Similarity=0.180 Sum_probs=114.6
Q ss_pred cccccccccEEEEEEEccC---CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYS---GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~---g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|++..+ +..||||+.+....... .+.
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~--------------------------------~~~------ 62 (281)
T 1mp8_A 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--------------------------------REK------ 62 (281)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHH--------------------------------HHH------
T ss_pred eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHH--------------------------------HHH------
Confidence 7899999999999998643 56799999865322110 011
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
+.+|+..+.++ .+++ +++++.. ..+..++||||++|++|.++........+... .+..++..++.|+|+.
T Consensus 63 ~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 135 (281)
T 1mp8_A 63 FLQEALTMRQF-----DHPH--IVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 135 (281)
T ss_dssp HHHHHHHHHTC-----CCTT--BCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-----CCCc--cceEEEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22222222222 1222 2222221 23567899999999999988654443455444 4457788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.+|.++|+|||++..+................+..||. ...+..++++|+||+|+.++++
T Consensus 136 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~slG~~l~el 210 (281)
T 1mp8_A 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-----INFRRFTSASDVWMFGVCMWEI 210 (281)
T ss_dssp TCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHH-----HHHCCCSHHHHHHHHHHHHHHH
T ss_pred CeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhh-----cccCCCCCccCchHHHHHHHHH
Confidence 99999999999999999999999999998875442211111111122444444 3445557789999999999999
Q ss_pred HH
Q 011399 368 FD 369 (487)
Q Consensus 368 ~~ 369 (487)
++
T Consensus 211 l~ 212 (281)
T 1mp8_A 211 LM 212 (281)
T ss_dssp HT
T ss_pred Hh
Confidence 85
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-25 Score=219.67 Aligned_cols=253 Identities=19% Similarity=0.125 Sum_probs=153.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+|+.||||+.+.........+. . .+.+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~-----------------------------~------~~~~ 55 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGE-----------------------------A------NVKK 55 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHH-----------------------------H------HHHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhH-----------------------------H------HHHH
Confidence 7899999999999999889999999998733111100000 1 1222
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeee-cCCCCceEEEeecCCCCcCcHHHH-HhcCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
|...+.++ . +++ +.+-.++. +.....++||||++|+ +.+.... .....+. ...+..++..++.+||+.|
T Consensus 56 E~~~l~~l----~-h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 129 (305)
T 2wtk_C 56 EIQLLRRL----R-HKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG 129 (305)
T ss_dssp HHHHHTTC----C-CTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhc----C-CCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33222222 1 122 11112221 2234679999999987 4443222 1223443 3345577888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcchHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYAL--DFLSPDVDVTPIVPALR 365 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~Di~sl~~~l~ 365 (487)
++|+|+||+||+++.+|.++|+|||++..+.+..... ......+..+..||. ... ...+.++|+||+|+.++
T Consensus 130 i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~~~Di~slG~il~ 204 (305)
T 2wtk_C 130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI-----ANGLDTFSGFKVDIWSAGVTLY 204 (305)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHH-----HTCCSCEESHHHHHHHHHHHHH
T ss_pred eeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhh-----ccCcccCCcchhhHHHHHHHHH
Confidence 9999999999999999999999999997654211000 000001122334443 321 12245789999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++. .++...+.......+... ... +....++.
T Consensus 205 ~l~~g~--~p~~~~~~~~~~~~i~~~----~~~---------------------------------------~~~~~~~~ 239 (305)
T 2wtk_C 205 NITTGL--YPFEGDNIYKLFENIGKG----SYA---------------------------------------IPGDCGPP 239 (305)
T ss_dssp HHHHSS--CSCCCSSHHHHHHHHHHC----CCC---------------------------------------CCSSSCHH
T ss_pred HHHhCC--CCCCCchHHHHHHHHhcC----CCC---------------------------------------CCCccCHH
Confidence 999843 344444433332222110 000 01134567
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVDFEF 477 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~ 477 (487)
+++.+.+||..||..|++..+.+.|+||.-..
T Consensus 240 l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 271 (305)
T 2wtk_C 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271 (305)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred HHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence 77888889999999999888888888885443
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-26 Score=222.34 Aligned_cols=256 Identities=15% Similarity=0.110 Sum_probs=157.0
Q ss_pred hhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 127 ~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
-|+.. +.||+|++|+||+|+++.+|+.||||+......... .+.
T Consensus 8 ~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~~-- 51 (276)
T 2yex_A 8 DWDLV--QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--------------------------------PEN-- 51 (276)
T ss_dssp HEEEE--EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTH--------------------------------HHH--
T ss_pred ceEEE--EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhh--------------------------------hHH--
Confidence 35544 789999999999999988999999999864311100 011
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLR 282 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~ 282 (487)
+.+|...+.++ .+++ +++++. ...+..++||||++|++|.+..... ...+ ....+..++..++.
T Consensus 52 ----~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ 119 (276)
T 2yex_A 52 ----IKKEICINKML-----NHEN--VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVV 119 (276)
T ss_dssp ----HHHHHHHHHTC-----CCTT--BCCEEEEEEETTEEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhc-----CCCC--ceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHH
Confidence 11122222111 1222 222222 2345668999999999998874321 1233 34455678888999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
++|+.|++|+|+||+||+++.+|.++|+|||++..+....... ......+..+..||.+. ...+.+.++|+||+|
T Consensus 120 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~Di~slG 195 (276)
T 2yex_A 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCG 195 (276)
T ss_dssp HHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGT----CSSBCHHHHHHHHHH
T ss_pred HHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHh----cCCCCCCcchHHHHH
Confidence 9999999999999999999999999999999997653221000 00000111223333221 112224568999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
+.+++++++. .++...+.... .+ ... . . ...... ....
T Consensus 196 ~il~~l~~g~--~p~~~~~~~~~-----------------~~----~~~---~---~-~~~~~~------------~~~~ 233 (276)
T 2yex_A 196 IVLTAMLAGE--LPWDQPSDSCQ-----------------EY----SDW---K---E-KKTYLN------------PWKK 233 (276)
T ss_dssp HHHHHHHHSS--CCCSCSCTTSH-----------------HH----HHH---H---T-TCTTST------------TGGG
T ss_pred HHHHHHHhCC--CCCCCCchHHH-----------------HH----HHh---h---h-cccccC------------chhh
Confidence 9999998843 23322211000 00 000 0 0 000000 0123
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.++.+++.+.+||..||..|++..+.+.|+||.-.
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (276)
T 2yex_A 234 IDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (276)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred cCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence 46788899999999999999999999999999643
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-25 Score=213.73 Aligned_cols=185 Identities=16% Similarity=0.128 Sum_probs=124.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++. +++.||||+.++..... +. +.+
T Consensus 14 ~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~----------------------------------~~------~~~ 52 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSE----------------------------------ED------FIE 52 (267)
T ss_dssp EEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCH----------------------------------HH------HHH
T ss_pred eEecCCCceeEEEEEec-CCCeEEEEEccccCCCH----------------------------------HH------HHH
Confidence 67999999999999997 88999999997542110 00 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++ .++++.-..-+....+..++||||++|++|.++........+... .+..++..++.++|+.|++|
T Consensus 53 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 127 (267)
T 3t9t_A 53 EAEVMMKL-----SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 127 (267)
T ss_dssp HHHHHHTC-----CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhC-----CCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 22222222 122221111122334667999999999999988654333344443 34577888999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+||+||+++.+|.++|+|||++............+......+..||. ...+..++++|+||+|+.++++++
T Consensus 128 ~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~slG~il~~l~~ 200 (267)
T 3t9t_A 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV-----FSFSRYSSKSDVWSFGVLMWEVFS 200 (267)
T ss_dssp SSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHH-----HHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhh-----hcCCCccchhchhhhHHHHHHHhc
Confidence 9999999999999999999999998765432211111111112334444 334455778999999999999987
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.4e-26 Score=223.28 Aligned_cols=256 Identities=13% Similarity=0.068 Sum_probs=158.1
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+.|... +.||+|+||.||+|++..+|+.||||+++........
T Consensus 29 ~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------- 73 (312)
T 2iwi_A 29 FEAEYRLG--PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWS--------------------------------- 73 (312)
T ss_dssp ----CEEE--EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC------------------------------------
T ss_pred hhhceEEe--eEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccc---------------------------------
Confidence 33445544 7899999999999999889999999998654211100
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEee-cCCCCcCcHHHHHhcCCCH--HHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEW-VEGVKLNEQVAIESQGLKV--LDLVNTGIQ 278 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~-~~G~~L~~~~~~~~~~~~~--~~~~~~~i~ 278 (487)
.......+..|...+.++.... .+++ +++++. ......++|||| +.|++|.++.... ...+. ...+..++.
T Consensus 74 ~~~~~~~~~~e~~~l~~l~~~~-~h~~--i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~ 149 (312)
T 2iwi_A 74 PLSDSVTCPLEVALLWKVGAGG-GHPG--VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVV 149 (312)
T ss_dssp -----CCCCHHHHHHHHHHSSC-CCSS--BCCEEEEC-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHhhcccC-CCCC--eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHH
Confidence 0001112223333333332111 1222 233322 223567899999 7899998875432 22333 344567788
Q ss_pred HHHHHHHHCCccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
.+|.|+|+.|++|+|+||+||+++ .+|.++|+|||++..+......... .+..+..||.+. ...+.+.++|+
T Consensus 150 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~---~~~~y~aPE~~~----~~~~~~~~~Di 222 (312)
T 2iwi_A 150 AAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD---GTRVYSPPEWIS----RHQYHALPATV 222 (312)
T ss_dssp HHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCC---SCTTTSCHHHHH----HSCBCHHHHHH
T ss_pred HHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccC---CcccccCceeee----cCCCCCccchH
Confidence 899999999999999999999999 8899999999998876543211111 122234444432 12233346899
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++++. .++... .. + . + ....
T Consensus 223 ~slG~il~~l~~g~--~pf~~~--~~----~---~---------------------~-----~~~~-------------- 251 (312)
T 2iwi_A 223 WSLGILLYDMVCGD--IPFERD--QE----I---L---------------------E-----AELH-------------- 251 (312)
T ss_dssp HHHHHHHHHHHHSS--CSCCSH--HH----H---H---------------------H-----TCCC--------------
T ss_pred HHHHHHHHHHHHCC--CCCCCh--HH----H---h---------------------h-----hccC--------------
Confidence 99999999999843 232211 00 0 0 0 0000
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
.....++.+++.+.+||..||..|++..+.+.|+||...
T Consensus 252 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~ 290 (312)
T 2iwi_A 252 FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP 290 (312)
T ss_dssp CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred CcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence 012346788899999999999999999999999999654
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-24 Score=211.43 Aligned_cols=186 Identities=16% Similarity=0.142 Sum_probs=121.2
Q ss_pred cccccccccEEEEEEEcc---CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKY---SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~---~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|++.. ++..||||+.++...... .+ .
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~------~ 59 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN--------------------------------KE------K 59 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHH--------------------------------HH------H
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchH--------------------------------HH------H
Confidence 789999999999999753 245699999875421110 01 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
+.+|+..+.++. +++ +++++.- .....++||||++|++|.++........+... .+..++..++.++|+.
T Consensus 60 ~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 132 (281)
T 3cc6_A 60 FMSEAVIMKNLD-----HPH--IVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132 (281)
T ss_dssp HHHHHHHHHHHC-----CTT--BCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCC-----CCC--cceEEEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 223333333331 222 2222211 13456899999999999988655444455443 3456788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.+|.++|+|||++...................+..||. ...+..++++|+||+|+.++++
T Consensus 133 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~slG~il~~l 207 (281)
T 3cc6_A 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES-----INFRRFTTASDVWMFAVCMWEI 207 (281)
T ss_dssp TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHH-----HHHCCCCHHHHHHHHHHHHHHH
T ss_pred CcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchh-----hccCCCCchhccHHHHHHHHHH
Confidence 99999999999999999999999999998876542211110001112344443 3445557789999999999999
Q ss_pred HH
Q 011399 368 FD 369 (487)
Q Consensus 368 ~~ 369 (487)
++
T Consensus 208 lt 209 (281)
T 3cc6_A 208 LS 209 (281)
T ss_dssp HT
T ss_pred Hh
Confidence 86
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.90 E-value=8.2e-25 Score=227.73 Aligned_cols=201 Identities=15% Similarity=0.179 Sum_probs=133.9
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|.++ +++.||||+++++.... + +|.+
T Consensus 194 ~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~----------------------------------~------~~~~ 232 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSV----------------------------------E------AFLA 232 (454)
T ss_dssp EEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCH----------------------------------H------HHHH
T ss_pred EEcccCCceEEEEEEEC-CccEEEEEEecCCCccH----------------------------------H------HHHH
Confidence 68999999999999997 78999999998642110 0 1222
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHH--HHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLD--LVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~--~~~~~i~~~l~~lh~~gi 289 (487)
|++.+.++. +++ +.+-.++. ....++||||++|++|.++.... ....+... .+..++..+|.|||+.|+
T Consensus 233 E~~~l~~l~-----h~~iv~l~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i 305 (454)
T 1qcf_A 233 EANVMKTLQ-----HDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 305 (454)
T ss_dssp HHHHHTTCC-----CTTBCCEEEEEC--SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhCC-----CCCEeeEEEEEe--CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 333222221 121 11112221 35678999999999999886532 22344433 456788899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+||||||+|||++.++.+||+|||+++.+.........+. ...+..++++....+..+.++|+||+|+.++++++
T Consensus 306 vHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t 380 (454)
T 1qcf_A 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA-----KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380 (454)
T ss_dssp CCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSS-----SSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCC-----cccccccCHHHhccCCCCcHHHHHhHHHHHHHHHh
Confidence 9999999999999999999999999988764422111111 11122334444445666888999999999999997
Q ss_pred HhccCCCCcCcHHHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGL 388 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l 388 (487)
. ...|+...+...+...+
T Consensus 381 ~-g~~P~~~~~~~~~~~~i 398 (454)
T 1qcf_A 381 Y-GRIPYPGMSNPEVIRAL 398 (454)
T ss_dssp T-SCCSSTTCCHHHHHHHH
T ss_pred C-CCCCCCCCCHHHHHHHH
Confidence 1 12455555655555443
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-25 Score=235.21 Aligned_cols=184 Identities=17% Similarity=0.184 Sum_probs=125.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++.+.... + +|.+
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~----------------------------------~------~~~~ 265 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV----------------------------------E------EFLK 265 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCH----------------------------------H------HHHH
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCcccch----------------------------------H------HHHH
Confidence 67999999999999999789999999987542110 0 1223
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHH--HHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLD--LVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~--~~~~~i~~~l~~lh~~g 288 (487)
|+..+.++. ++++ .+++ .......+|||||++|++|.++.... ....+... .+..++..+|.|||++|
T Consensus 266 E~~~l~~l~-----hpni--v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 338 (495)
T 1opk_A 266 EAAVMKEIK-----HPNL--VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 338 (495)
T ss_dssp HHHHHHHCC-----CTTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcC-----CCCE--eeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 333333321 2222 2222 22345679999999999999885432 12244433 44578888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
|+||||||+|||++.++.+||+|||+++.+.........+......+..||.+ ..+..+.++|+||+|+.+++++
T Consensus 339 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~sDvwSlG~~l~el~ 413 (495)
T 1opk_A 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKFSIKSDVWAFGVLLWEIA 413 (495)
T ss_dssp EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHH-----HHCEECHHHHHHHHHHHHHHHH
T ss_pred cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHH-----hcCCCCcHHhHHhHHHHHHHHH
Confidence 99999999999999999999999999987643211000010001223344443 3445577899999999999999
Q ss_pred H
Q 011399 369 D 369 (487)
Q Consensus 369 ~ 369 (487)
+
T Consensus 414 t 414 (495)
T 1opk_A 414 T 414 (495)
T ss_dssp T
T ss_pred h
Confidence 7
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-24 Score=216.85 Aligned_cols=201 Identities=16% Similarity=0.200 Sum_probs=128.5
Q ss_pred cccccccccEEEEEEEc-------cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-------YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-------~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
+.||+|+||+||+|++. .++..||||+++...... +. +.
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~-----------------------------~~-- 132 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DL-----------------------------SD-- 132 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHH---HH-----------------------------HH--
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHH---HH-----------------------------HH--
Confidence 68999999999999974 256789999997542211 00 01
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhc---------------CCCH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------GLKV 269 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~ 269 (487)
+.+|...+.++ ..+++ |++++ .......++||||++|++|.++...... ..+.
T Consensus 133 ----~~~E~~~l~~l----~~hpn--Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 202 (370)
T 2psq_A 133 ----LVSEMEMMKMI----GKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202 (370)
T ss_dssp ----HHHHHHHHHHS----CCCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCH
T ss_pred ----HHHHHHHHHHh----cCCCC--EeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCH
Confidence 22222222222 12232 22222 2334667999999999999887543221 1233
Q ss_pred --HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHH
Q 011399 270 --LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYY 346 (487)
Q Consensus 270 --~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 346 (487)
...+..++..||.|||+.|++||||||+|||++.+|.+||+|||+++.+...... ..........+..||. .
T Consensus 203 ~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~-----~ 277 (370)
T 2psq_A 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA-----L 277 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHH-----H
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhH-----h
Confidence 2345578889999999999999999999999999999999999999865432100 0000001122344443 3
Q ss_pred HcCCCCCCCCcchHHHHHHHHHH-HhccCCCCcCcHHHHH
Q 011399 347 ALDFLSPDVDVTPIVPALRNFFD-DALNSSVSELNFKTIV 385 (487)
Q Consensus 347 ~~g~~~~~~Di~sl~~~l~~~~~-~~~~~~~~~~~~~~~~ 385 (487)
.-+..++++|+||+|+.++++++ +. .++...+...+.
T Consensus 278 ~~~~~~~~~DvwslG~il~ellt~g~--~p~~~~~~~~~~ 315 (370)
T 2psq_A 278 FDRVYTHQSDVWSFGVLMWEIFTLGG--SPYPGIPVEELF 315 (370)
T ss_dssp HTCCCCHHHHHHHHHHHHHHHHTTSC--CSSTTCCGGGHH
T ss_pred cCCCCCcHHHHHHHHHHHHHHHcCCC--CCCCCCCHHHHH
Confidence 44556788999999999999997 32 344444433333
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=212.05 Aligned_cols=202 Identities=16% Similarity=0.143 Sum_probs=125.9
Q ss_pred cccccccccEEEEEEEccC-----CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYS-----GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~-----g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|.++.+ ++.||||+....... ...+++.++.+.. .
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~e~~~~~~~~~----------~---------------- 93 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAK----------P---------------- 93 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHH-HHHHHHHHHHHCC----------H----------------
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccchh-HHHHHHHHHhhhh----------h----------------
Confidence 7899999999999998743 589999998765322 2222222222210 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCC------CCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYT------SGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCS 280 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~ 280 (487)
++..|...+ ....+..+++++.... ...+|||||+ |++|.++.......++. ...+..++..+
T Consensus 94 -~~~~e~~~~-------~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~ 164 (364)
T 3op5_A 94 -EQIQKWIRT-------RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDI 164 (364)
T ss_dssp -HHHHHHHHH-------TTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHH-------hhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 001111111 1112233444443221 2368999999 99999886543334444 34456778889
Q ss_pred HHHHHHCCccccCCCCCCeEEc--CCCcEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 281 LRQLLEYGYFHADPHPGNLLAT--PEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~--~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
|.|||+.||+||||||+|||++ .++.++|+|||+++.+........ .........+++..++++...-...++++|+
T Consensus 165 l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 244 (364)
T 3op5_A 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDL 244 (364)
T ss_dssp HHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHH
T ss_pred HHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhH
Confidence 9999999999999999999999 889999999999987654321000 0000000012233334444444446778899
Q ss_pred chHHHHHHHHHHHh
Q 011399 358 TPIVPALRNFFDDA 371 (487)
Q Consensus 358 ~sl~~~l~~~~~~~ 371 (487)
||+|+.+++++++.
T Consensus 245 ~slG~~l~el~~g~ 258 (364)
T 3op5_A 245 EILGYCMIQWLTGH 258 (364)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999843
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-24 Score=212.48 Aligned_cols=184 Identities=13% Similarity=0.136 Sum_probs=125.4
Q ss_pred cccccccccEEEEEEEccCC-------cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSG-------QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g-------~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
+.||+|+||.||+|+++.+| ..||+|+......... +.
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~---------------------------------~~-- 58 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS---------------------------------ES-- 58 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGH---------------------------------HH--
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHH---------------------------------HH--
Confidence 67999999999999998766 5799999864321110 01
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQL 284 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~l 284 (487)
+.+|+..+.++ .++++.-..-+.......++||||++|++|.++........+.. ..+..++..+|.||
T Consensus 59 ----~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L 129 (289)
T 4fvq_A 59 ----FFEAASMMSKL-----SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129 (289)
T ss_dssp ----HHHHHHHHHTS-----CCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhC-----CCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12222222222 12222111112233466789999999999998865544334443 34567888899999
Q ss_pred HHCCccccCCCCCCeEEcCCCc--------EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 285 LEYGYFHADPHPGNLLATPEGK--------LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~--------i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
|+.|++|||+||+|||++.++. ++|+|||++........ ..+ +..+..||.+.. .+..++++|
T Consensus 130 H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~---~~~y~aPE~~~~----~~~~~~~~D 200 (289)
T 4fvq_A 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI--LQE---RIPWVPPECIEN----PKNLNLATD 200 (289)
T ss_dssp HHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHH--HHH---TTTTSCHHHHHC----GGGCCHHHH
T ss_pred hhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCccc--cCC---cCcccCHHHhCC----CCCCCchhH
Confidence 9999999999999999998887 99999999987765422 122 233455554421 144577899
Q ss_pred cchHHHHHHHHHHH
Q 011399 357 VTPIVPALRNFFDD 370 (487)
Q Consensus 357 i~sl~~~l~~~~~~ 370 (487)
+||+|+.+++++++
T Consensus 201 iwslG~il~el~~g 214 (289)
T 4fvq_A 201 KWSFGTTLWEICSG 214 (289)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999974
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-25 Score=227.11 Aligned_cols=189 Identities=14% Similarity=0.110 Sum_probs=123.5
Q ss_pred cccccccccEEEEEE-----EccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQ-----LKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~-----~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|+ ...+|+.||||+.++...........+++.+. ...|++++.+
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~-------~~~~~~iv~~----------- 132 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLK-------PSMQHMFMKF----------- 132 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSC-------GGGGGGBCCE-----------
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhh-------hhhhhhhhhh-----------
Confidence 579999999999994 55589999999998765443332222222111 1112111111
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh----cCCCH--HHHHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES----QGLKV--LDLVNTGIQCSLR 282 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~----~~~~~--~~~~~~~i~~~l~ 282 (487)
.-+....+..+|||||++|++|.++..... ...+. ...+..++..||.
T Consensus 133 --------------------------~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~ 186 (365)
T 3e7e_A 133 --------------------------YSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIE 186 (365)
T ss_dssp --------------------------EEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHH
T ss_pred --------------------------heeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHH
Confidence 112223466799999999999998865422 22343 4456678889999
Q ss_pred HHHHCCccccCCCCCCeEEcC-----------CCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCC
Q 011399 283 QLLEYGYFHADPHPGNLLATP-----------EGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDF 350 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~-----------~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (487)
|||+.||+||||||+|||++. ++.+||+|||++..+...... .......+..+..|| +...+.
T Consensus 187 ~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE-----~~~~~~ 261 (365)
T 3e7e_A 187 QVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVE-----MLSNKP 261 (365)
T ss_dssp HHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHH-----HHTTCC
T ss_pred HHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChH-----HhcCCC
Confidence 999999999999999999998 899999999999654211000 000011122333444 444444
Q ss_pred CCCCCCcchHHHHHHHHHHHh
Q 011399 351 LSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 351 ~~~~~Di~sl~~~l~~~~~~~ 371 (487)
.++++|+||+|+.+++++++.
T Consensus 262 ~~~~~DiwslG~il~elltg~ 282 (365)
T 3e7e_A 262 WNYQIDYFGVAATVYCMLFGT 282 (365)
T ss_dssp BSTHHHHHHHHHHHHHHHHSS
T ss_pred CCccccHHHHHHHHHHHHhCC
Confidence 578899999999999999854
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=218.75 Aligned_cols=200 Identities=17% Similarity=0.200 Sum_probs=128.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++ ++..||||+++++.... + +|.+
T Consensus 190 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----------------------------------~------~~~~ 228 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP----------------------------------E------AFLQ 228 (452)
T ss_dssp EEEEECSSCEEEEEEET-TTEEEEEEECCTTSSCH----------------------------------H------HHHH
T ss_pred eeecCCCCeEEEEEEEC-CCceEEEEEeccCCCCH----------------------------------H------HHHH
Confidence 67999999999999997 67889999997642110 0 1233
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|++.+.++. +++ +.+-.++. ....++||||++|++|.++..... ...+. ...+..++..++.|||+.|+
T Consensus 229 E~~~l~~l~-----hp~iv~~~~~~~--~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 301 (452)
T 1fmk_A 229 EAQVMKKLR-----HEKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301 (452)
T ss_dssp HHHHHHHCC-----CTTBCCEEEEEC--SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCC-----CCCEeeEEEEEc--CCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 444333331 222 11112222 256789999999999998865432 22443 33455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+||||||+|||++.++.+||+|||+++.+.........+......+..||. ...+..++++|+||+|+.++++++
T Consensus 302 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~sDvwslG~~l~el~t 376 (452)
T 1fmk_A 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-----ALYGRFTIKSDVWSFGILLTELTT 376 (452)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHH-----HHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred eCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhH-----HhcCCCCccccHHhHHHHHHHHHh
Confidence 999999999999999999999999998876442211111111122344443 344556888999999999999997
Q ss_pred HhccCCCCcCcHHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDG 387 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~ 387 (487)
. ...|+...+...+...
T Consensus 377 ~-g~~P~~~~~~~~~~~~ 393 (452)
T 1fmk_A 377 K-GRVPYPGMVNREVLDQ 393 (452)
T ss_dssp T-TCCSSTTCCHHHHHHH
T ss_pred C-CCCCCCCCCHHHHHHH
Confidence 2 1245555555444433
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-26 Score=231.22 Aligned_cols=193 Identities=19% Similarity=0.213 Sum_probs=122.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++...... .. +. +.+
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------~~--------~~------~~~ 56 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR------------------------PV--------DV------QMR 56 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS------------------------CH--------HH------HHH
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc------------------------hH--------HH------HHH
Confidence 67999999999999999889999999986421110 00 00 112
Q ss_pred HHHHHHHHHHHhCCCCCe-EeceeeecC-CCCceEEEeecCCCCcCcHHHHHhc--CCCH--HHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQ--GLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
|+..+.++ . ++++ .+-.++.+. ....++||||++|++|.++...... +.+. ...+..++..+|.|||+.
T Consensus 57 E~~~l~~l----~-hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 131 (396)
T 4eut_A 57 EFEVLKKL----N-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131 (396)
T ss_dssp HHHHHHHC----C-CTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhc----C-CCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22222222 1 2221 111122221 2356899999999999887543221 1343 345567888899999999
Q ss_pred CccccCCCCCCeEE----cCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH---cCCCCCCCCcchH
Q 011399 288 GYFHADPHPGNLLA----TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA---LDFLSPDVDVTPI 360 (487)
Q Consensus 288 givH~Dlkp~Nili----~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~Di~sl 360 (487)
|++|||+||+|||+ +.++.+||+|||++..+...... .....+..+..||.+...... .+..++++|+||+
T Consensus 132 ~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSl 209 (396)
T 4eut_A 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209 (396)
T ss_dssp TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGS--SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHH
T ss_pred CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCcc--ccccCCccccCHHHhhccccccccccCCCcHHHHHHH
Confidence 99999999999999 67778999999999877544211 111112334455544321000 0112557899999
Q ss_pred HHHHHHHHHHh
Q 011399 361 VPALRNFFDDA 371 (487)
Q Consensus 361 ~~~l~~~~~~~ 371 (487)
|+.+++++++.
T Consensus 210 G~il~el~tg~ 220 (396)
T 4eut_A 210 GVTFYHAATGS 220 (396)
T ss_dssp HHHHHHHHHSS
T ss_pred HHHHHHHHHCC
Confidence 99999999853
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-25 Score=218.12 Aligned_cols=195 Identities=15% Similarity=0.104 Sum_probs=121.2
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+-|... +.||+|+||+||+|++ +|+.||||+..+........+.+++.. ....|+|++.+++.+
T Consensus 6 ~~~~y~~~--~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~--------~~l~h~niv~~~~~~-- 71 (301)
T 3q4u_A 6 VARDITLL--ECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNT--------VMLRHENILGFIASD-- 71 (301)
T ss_dssp CGGGCEEE--EEEEECSSEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHH--------TCCCCTTBCCEEEEE--
T ss_pred ccCcEEEE--EeeccCCCcEEEEEEE--CCEEEEEEEeccccchhhHHHHHHHHH--------hhccCcCeeeEEEee--
Confidence 33445544 7899999999999987 699999999875432221111111100 001233322211100
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSL 281 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l 281 (487)
..........++||||++|++|.++.. ....+. ...+..++..++
T Consensus 72 -------------------------------~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l 118 (301)
T 3q4u_A 72 -------------------------------MTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGL 118 (301)
T ss_dssp -------------------------------EEEETTEEEEEEEECCCTTCBHHHHHT--TCCBCHHHHHHHHHHHHHHH
T ss_pred -------------------------------ccccCCCceeEEehhhccCCCHHHHHh--hcccCHHHHHHHHHHHHHHH
Confidence 000111234689999999999988853 333443 344567788899
Q ss_pred HHHH--------HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH---HHHHHHHHHhcCHHHHHHHHHHcCC
Q 011399 282 RQLL--------EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA---IIGHVVHMVNRDYEAMARDYYALDF 350 (487)
Q Consensus 282 ~~lh--------~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (487)
.|+| +.|++|||+||+|||++.+|.+||+|||++.......... ......+..+..||.+ ..+.
T Consensus 119 ~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~ 193 (301)
T 3q4u_A 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL-----DETI 193 (301)
T ss_dssp HHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHH-----TTCC
T ss_pred HHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhh-----cCcC
Confidence 9999 9999999999999999999999999999986543221100 0000112233444443 2221
Q ss_pred ------CCCCCCcchHHHHHHHHHHH
Q 011399 351 ------LSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 351 ------~~~~~Di~sl~~~l~~~~~~ 370 (487)
.++++|+||+|+.+++++++
T Consensus 194 ~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 194 QVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcccCCchhhHHHHHHHHHHHHhh
Confidence 12468999999999999975
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-23 Score=209.93 Aligned_cols=197 Identities=15% Similarity=0.109 Sum_probs=123.2
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+-|... +.||+|+||.||+|++ +|+.||||+...........+.+++ ......|+|++.++
T Consensus 35 ~~~~y~~~--~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~--------~~~~~~h~~i~~~~----- 97 (337)
T 3mdy_A 35 IAKQIQMV--KQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRETEIY--------QTVLMRHENILGFI----- 97 (337)
T ss_dssp HHHHCEEE--EEEEEETTEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHH--------TSTTCCCTTBCCEE-----
T ss_pred cccceEEE--eEeecCCCeEEEEEEE--CCceEEEEEEeccccchhhhHHHHH--------HHHhhcCCCeeeEE-----
Confidence 33445555 7899999999999997 4999999998644222111110000 00001233322211
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCC---CCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYT---SGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCS 280 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~---~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~ 280 (487)
..+.... ...++||||++|++|.++.............+..++..+
T Consensus 98 -------------------------------~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~ 146 (337)
T 3mdy_A 98 -------------------------------AADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSG 146 (337)
T ss_dssp -------------------------------EEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHH
T ss_pred -------------------------------EEEccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHH
Confidence 1111111 456899999999999988543322233334556778889
Q ss_pred HHHHHHC--------CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 281 LRQLLEY--------GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 281 l~~lh~~--------givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+.|+|.. |++|||+||+|||++.+|.+||+|||++..+......... ......+.+..++++.+..+...
T Consensus 147 l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~ 224 (337)
T 3mdy_A 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI--PPNTRVGTKRYMPPEVLDESLNR 224 (337)
T ss_dssp HHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-----------CCSSCSCGGGCCHHHHTTCCCT
T ss_pred HHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccC--CCCCCccCcceeChhhcccccCC
Confidence 9999998 9999999999999999999999999999877554321100 00011123333444444444444
Q ss_pred CC------CCcchHHHHHHHHHHH
Q 011399 353 PD------VDVTPIVPALRNFFDD 370 (487)
Q Consensus 353 ~~------~Di~sl~~~l~~~~~~ 370 (487)
.. +|+||+|+.+++++++
T Consensus 225 ~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 225 NHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp TCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccCccccchHHHHHHHHHHHhc
Confidence 44 7999999999999975
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-24 Score=212.05 Aligned_cols=201 Identities=16% Similarity=0.190 Sum_probs=129.9
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|++. .+|+.||||+.++...... .+.
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~~---- 96 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM--------------------------------QAD---- 96 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHH--------------------------------HHH----
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHH--------------------------------HHH----
Confidence 78999999999999986 3458999999975432210 011
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh----------------------
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES---------------------- 264 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------------- 264 (487)
+.+|+..+.++ .+++ +++++ .......++||||++|++|.++.....
T Consensus 97 --~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T 1luf_A 97 --FQREAALMAEF-----DNPN--IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167 (343)
T ss_dssp --HHHHHHHHHTC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC---------------------
T ss_pred --HHHHHHHHHhC-----CCCC--EEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccC
Confidence 22233322222 1222 22222 233466799999999999998754321
Q ss_pred -cCCCHH--HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHH
Q 011399 265 -QGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEA 340 (487)
Q Consensus 265 -~~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~ 340 (487)
...+.. ..+..++..++.|||++|++|+|+||+||+++.+|.++|+|||++..+....... ......+..+..||.
T Consensus 168 ~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~ 247 (343)
T 1luf_A 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES 247 (343)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhh
Confidence 223333 3456788889999999999999999999999999999999999987554321100 000001122334443
Q ss_pred HHHHHHHcCCCCCCCCcchHHHHHHHHHH-HhccCCCCcCcHHHHHH
Q 011399 341 MARDYYALDFLSPDVDVTPIVPALRNFFD-DALNSSVSELNFKTIVD 386 (487)
Q Consensus 341 ~~~~~~~~g~~~~~~Di~sl~~~l~~~~~-~~~~~~~~~~~~~~~~~ 386 (487)
...+..++++|+||+|+.++++++ +. .++...+...+..
T Consensus 248 -----~~~~~~~~~~Di~slG~il~el~t~g~--~p~~~~~~~~~~~ 287 (343)
T 1luf_A 248 -----IFYNRYTTESDVWAYGVVLWEIFSYGL--QPYYGMAHEEVIY 287 (343)
T ss_dssp -----HHHCCCCHHHHHHHHHHHHHHHHTTTC--CTTTTSCHHHHHH
T ss_pred -----hccCCcCcccccHHHHHHHHHHHhcCC--CcCCCCChHHHHH
Confidence 344556788999999999999997 32 3455555444443
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-25 Score=223.24 Aligned_cols=188 Identities=20% Similarity=0.175 Sum_probs=122.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++ +|+.||||+..+...... ..+......+....|+|++.+++
T Consensus 45 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~-------------- 102 (321)
T 2qkw_B 45 FLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGI-------EEFETEIETLSFCRHPHLVSLIG-------------- 102 (321)
T ss_dssp CCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHH-------HHHHHHHHGGGSCCCTTBCCEEE--------------
T ss_pred ceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHH-------HHHHHHHHHHHhCCCCCEeeEEE--------------
Confidence 67999999999999986 899999999876532211 01111111111122333222221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
+....+..++||||++|++|.++..... ...+. ...+..++..++.|+|+.|
T Consensus 103 -----------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 159 (321)
T 2qkw_B 103 -----------------------FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA 159 (321)
T ss_dssp -----------------------ECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------EEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 1223456799999999999988743221 12333 3345577888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
++|+|+||+||+++.+|.++|+|||++........... .....+..+..||.+ ..+..++++|+||+|+.++++
T Consensus 160 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Di~slG~il~el 234 (321)
T 2qkw_B 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYF-----IKGRLTEKSDVYSFGVVLFEV 234 (321)
T ss_dssp EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHH-----HHCBCCTHHHHHHHHHHHHHH
T ss_pred eecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHh-----cCCCCCcccchHhHHHHHHHH
Confidence 99999999999999999999999999875432110000 000011223444443 345568889999999999999
Q ss_pred HHHh
Q 011399 368 FDDA 371 (487)
Q Consensus 368 ~~~~ 371 (487)
+++.
T Consensus 235 l~g~ 238 (321)
T 2qkw_B 235 LCAR 238 (321)
T ss_dssp HHCC
T ss_pred HhCC
Confidence 9853
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-24 Score=220.66 Aligned_cols=201 Identities=21% Similarity=0.225 Sum_probs=132.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+.+....... .-++.+
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------------~~~~~~ 161 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--------------------------------------KAKFLQ 161 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHH--------------------------------------HTTTTH
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHH--------------------------------------HHHHHH
Confidence 689999999999999988999999999875422110 001223
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (487)
|++.+.++ .+++ +.+++ .......++||||++|++|.++........+.. ..+..++..|+.|||+.|+
T Consensus 162 E~~~l~~l-----~hpn--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i 234 (377)
T 3cbl_A 162 EARILKQY-----SHPN--IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234 (377)
T ss_dssp HHHHHTTC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhC-----CCCC--EEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 33333222 1222 22222 223456799999999999998865544334443 3455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHH-HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGH-VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
+|||+||+|||++.+|.+||+|||+++...........+. .....+..||. ...+..+.++|+||+|+.+++++
T Consensus 235 vHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~DvwslG~il~el~ 309 (377)
T 3cbl_A 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEA-----LNYGRYSSESDVWSFGILLWETF 309 (377)
T ss_dssp ECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHH-----HHHCEEEHHHHHHHHHHHHHHHH
T ss_pred CCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhH-----hccCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999876543210000000 00112334443 34455577899999999999999
Q ss_pred HHhccCCCCcCcHHHHH
Q 011399 369 DDALNSSVSELNFKTIV 385 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~ 385 (487)
+. ...|+...+...+.
T Consensus 310 t~-g~~p~~~~~~~~~~ 325 (377)
T 3cbl_A 310 SL-GASPYPNLSNQQTR 325 (377)
T ss_dssp TT-SCCSSTTSCHHHHH
T ss_pred hC-CCCCCCCCCHHHHH
Confidence 72 12355555544433
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-24 Score=213.34 Aligned_cols=201 Identities=13% Similarity=0.052 Sum_probs=120.6
Q ss_pred hCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHH
Q 011399 120 LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199 (487)
Q Consensus 120 lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~ 199 (487)
.|...-+-|... +.||+|+||.||+|....+|+.||||+++........
T Consensus 26 ~~~~~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~----------------------------- 74 (310)
T 2wqm_A 26 MGYNTLANFRIE--KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK----------------------------- 74 (310)
T ss_dssp GTTSSGGGEEEE--EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHH-----------------------------
T ss_pred cccccccceEEE--EeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHH-----------------------------
Confidence 343333334444 7899999999999999889999999998743110000
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHH---hcCCCHH--HH
Q 011399 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKVL--DL 272 (487)
Q Consensus 200 ~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~~--~~ 272 (487)
.... +.+|+..+.++ .+++ +++++. ......++||||++|++|.++.... ....+.. ..
T Consensus 75 -~~~~------~~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 140 (310)
T 2wqm_A 75 -ARAD------CIKEIDLLKQL-----NHPN--VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140 (310)
T ss_dssp -HHHH------HHHHHHHHHTC-----CCTT--BCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHH
T ss_pred -HHHH------HHHHHHHHHhC-----CCCC--EeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHH
Confidence 0011 22233322222 1222 222222 2245678999999999998875432 1223433 34
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+..++..++.++|+.|++|+|+||+||+++.+|.++|+|||++..+...... .........+..||. ...+..+
T Consensus 141 i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~-----~~~~~~~ 214 (310)
T 2wqm_A 141 YFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPER-----IHENGYN 214 (310)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-------------------CCSSCCHHH-----HTTCCCC
T ss_pred HHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc-ccccCCCeeEeChHH-----hCCCCCC
Confidence 5577888999999999999999999999999999999999999876543211 111111223344443 3344557
Q ss_pred CCCCcchHHHHHHHHHHHh
Q 011399 353 PDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~~~ 371 (487)
.+.|+||+|+.+++++++.
T Consensus 215 ~~~Dv~slG~il~~l~~g~ 233 (310)
T 2wqm_A 215 FKSDIWSLGCLLYEMAALQ 233 (310)
T ss_dssp HHHHHHHHHHHHHHHHHSS
T ss_pred chhhHHHHHHHHHHHHhCC
Confidence 7889999999999999854
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=8e-25 Score=218.04 Aligned_cols=195 Identities=17% Similarity=0.139 Sum_probs=119.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+. +|+.||||+++.........+..+ .......|+|++.+++.
T Consensus 19 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~--------~~~~~~~h~~i~~~~~~------------- 75 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNI--------YRVPLMEHDNIARFIVG------------- 75 (336)
T ss_dssp EEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHH--------HTSTTCCCTTBCCEEEE-------------
T ss_pred eecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHH--------HHHHhccCcchhhheec-------------
Confidence 7899999999999976 799999999875432221111000 00001122222221100
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC------
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY------ 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~------ 287 (487)
...+..+.....++||||++|++|.++.............+..++..+|.|||+.
T Consensus 76 -------------------~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~ 136 (336)
T 3g2f_A 76 -------------------DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDH 136 (336)
T ss_dssp -------------------EEEECTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGG
T ss_pred -------------------ccccccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccc
Confidence 0000111122458999999999999885433332233344567888899999999
Q ss_pred ---CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHH-------HHHHHHHHHHHHhcCHHHHHHHHH--HcCCCCCCC
Q 011399 288 ---GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA-------RFAIIGHVVHMVNRDYEAMARDYY--ALDFLSPDV 355 (487)
Q Consensus 288 ---givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~ 355 (487)
|++||||||+|||++.+|.+||+|||++..+.... .........+..+..||.+..... .....++++
T Consensus 137 ~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~ 216 (336)
T 3g2f_A 137 YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV 216 (336)
T ss_dssp CBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHH
T ss_pred cccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccccccccccc
Confidence 99999999999999999999999999998764321 000111112234445554421000 001124568
Q ss_pred CcchHHHHHHHHHHH
Q 011399 356 DVTPIVPALRNFFDD 370 (487)
Q Consensus 356 Di~sl~~~l~~~~~~ 370 (487)
|+||+|+.+++++++
T Consensus 217 DiwslG~il~ell~g 231 (336)
T 3g2f_A 217 DMYALGLIYWEIFMR 231 (336)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHhc
Confidence 999999999999964
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-23 Score=202.01 Aligned_cols=199 Identities=15% Similarity=0.127 Sum_probs=127.6
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
.+.|... +.||+|+||.||+|++..+|+.||||+....... .
T Consensus 8 ~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------------------~------------ 49 (296)
T 4hgt_A 8 GNRYRLG--RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------------------------P------------ 49 (296)
T ss_dssp ---CEEE--EEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------------------------C------------
T ss_pred CCceEEe--eeecCCCCeEEEEEEEcCCCceEEEEeecccccc------------------------h------------
Confidence 3445544 7899999999999999889999999986533110 0
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLR 282 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~ 282 (487)
.+..|...+.++ .+.+.+.....+.......++||||+ |++|.++........+.. ..+..++..++.
T Consensus 50 -----~~~~e~~~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 119 (296)
T 4hgt_A 50 -----QLHIESKIYKMM----QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIE 119 (296)
T ss_dssp -----CHHHHHHHHHHH----TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHh----cCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 122223222222 22333333333444456679999999 889988755433444443 445577888999
Q ss_pred HHHHCCccccCCCCCCeEE---cCCCcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 283 QLLEYGYFHADPHPGNLLA---TPEGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili---~~~g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
|+|++|++|||+||+|||+ +.++.++|+|||++..+.......... .......+.+..++++....+..++++|+|
T Consensus 120 ~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 199 (296)
T 4hgt_A 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE 199 (296)
T ss_dssp HHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHH
T ss_pred HHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHH
Confidence 9999999999999999999 788999999999998664321100000 000001112223333344444457788999
Q ss_pred hHHHHHHHHHHHh
Q 011399 359 PIVPALRNFFDDA 371 (487)
Q Consensus 359 sl~~~l~~~~~~~ 371 (487)
|+|+.+++++++.
T Consensus 200 slG~il~~l~~g~ 212 (296)
T 4hgt_A 200 SLGYVLMYFNLGS 212 (296)
T ss_dssp HHHHHHHHHHHSS
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999854
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-24 Score=216.01 Aligned_cols=189 Identities=15% Similarity=0.147 Sum_probs=122.5
Q ss_pred cccccccccEEEEEE-----EccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQ-----LKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~-----~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|+ ...+|+.||||+++....... .+.
T Consensus 28 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~~---- 71 (359)
T 3vhe_A 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--------------------------------HRA---- 71 (359)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH--------------------------------HHH----
T ss_pred eeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHH--------------------------------HHH----
Confidence 789999999999998 445679999999975422110 001
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC---------------------
Q 011399 209 LNYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG--------------------- 266 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~--------------------- 266 (487)
+.+|.+.+.++ .+++++ .+-..+.+.....++||||++|++|.++.......
T Consensus 72 --~~~E~~~l~~l----~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (359)
T 3vhe_A 72 --LMSELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 145 (359)
T ss_dssp --HHHHHHHHHHH----CCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------
T ss_pred --HHHHHHHHHhh----cCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhccccccccc
Confidence 22233333332 122221 11122222234578999999999998875432110
Q ss_pred --------------------------------------------CCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeE
Q 011399 267 --------------------------------------------LKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLL 300 (487)
Q Consensus 267 --------------------------------------------~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nil 300 (487)
.+. ...+..++..+|.|||+.|++|||+||+|||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIl 225 (359)
T 3vhe_A 146 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 225 (359)
T ss_dssp --------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred chhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEE
Confidence 222 3345577888999999999999999999999
Q ss_pred EcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 301 ATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 301 i~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
++.+|.++|+|||++..+....... ......+..+..||.+ ..+..++++|+||+|+.++++++
T Consensus 226 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-----~~~~~~~~~Di~slG~il~ellt 290 (359)
T 3vhe_A 226 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFS 290 (359)
T ss_dssp ECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHH-----HHCCCCHHHHHHHHHHHHHHHTT
T ss_pred EcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhh-----cCCCCCchhhhhhHHHHHHHHHh
Confidence 9999999999999998763321100 0000011223444443 34556788999999999999986
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-24 Score=210.20 Aligned_cols=186 Identities=16% Similarity=0.145 Sum_probs=122.5
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|+++ .+++.||||+.+........
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~-------------------------------------- 72 (322)
T 1p4o_A 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------------------------------------- 72 (322)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHH--------------------------------------
T ss_pred eEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHH--------------------------------------
Confidence 78999999999999886 35789999998743211100
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh---------cCCCHH--HHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES---------QGLKVL--DLVNT 275 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~---------~~~~~~--~~~~~ 275 (487)
..+.+|...+.++ .+++ +++++ .......++||||++|++|.++..... ...+.. ..+..
T Consensus 73 ~~~~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 145 (322)
T 1p4o_A 73 IEFLNEASVMKEF-----NCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145 (322)
T ss_dssp HHHHHHHHHGGGC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCC--EeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHH
Confidence 0122222222222 1222 22222 233456799999999999998755322 122333 34457
Q ss_pred HHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCC
Q 011399 276 GIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPD 354 (487)
Q Consensus 276 ~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (487)
++..+|.++|+.|++|+|+||+||+++.+|.++|+|||++..+.......... ...+..+..||. ...+..+++
T Consensus 146 qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~ 220 (322)
T 1p4o_A 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES-----LKDGVFTTY 220 (322)
T ss_dssp HHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHH-----HHHCCCCHH
T ss_pred HHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhh-----hccCCCCch
Confidence 78889999999999999999999999999999999999998764432100000 000112334443 334556778
Q ss_pred CCcchHHHHHHHHHH
Q 011399 355 VDVTPIVPALRNFFD 369 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~ 369 (487)
+|+||+|+.++++++
T Consensus 221 ~Di~slG~il~el~~ 235 (322)
T 1p4o_A 221 SDVWSFGVVLWEIAT 235 (322)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHh
Confidence 999999999999987
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-24 Score=215.32 Aligned_cols=193 Identities=15% Similarity=0.116 Sum_probs=114.9
Q ss_pred cccccccccEEEEEEEccCC---cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSG---QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g---~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|++..++ ..||||..+...... ..+.+......+....|+|++.++
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~E~~il~~l~hpnIv~~~------------ 156 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG------EVSQFLTEGIIMKDFSHPNVLSLL------------ 156 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSH------HHHHHHHHHTTSTTCCCTTBCCCC------------
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHH------HHHHHHHHHHHHHhCCCCCcceEE------------
Confidence 67999999999999986332 468999886432111 001111111111122233332222
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~g 288 (487)
.++.+..+..++||||++|++|.++........+... .+..++..++.|||+.|
T Consensus 157 ------------------------~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 212 (373)
T 3c1x_A 157 ------------------------GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212 (373)
T ss_dssp ------------------------EEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ------------------------EEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 1122233567899999999999988543333344433 34567888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|||+||+|||++.+|.+||+|||+++.+........... ......+..++++....+..++++|+||+|+.+++++
T Consensus 213 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ell 290 (373)
T 3c1x_A 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK--TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 290 (373)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC-----------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred EecCccchheEEECCCCCEEEeecccccccccccccccccc--CCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987754422111111 1111122233333344455678899999999999999
Q ss_pred HH
Q 011399 369 DD 370 (487)
Q Consensus 369 ~~ 370 (487)
+.
T Consensus 291 t~ 292 (373)
T 3c1x_A 291 TR 292 (373)
T ss_dssp TT
T ss_pred hC
Confidence 73
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-23 Score=204.83 Aligned_cols=179 Identities=19% Similarity=0.199 Sum_probs=118.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+. .|+.||||+........ .+.+
T Consensus 14 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~-----------------------------------------~~~~ 50 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKW--RAKDVAIKQIESESERK-----------------------------------------AFIV 50 (307)
T ss_dssp EEEECCSSSEEEEEEE--TTEEEEEEECSSTTHHH-----------------------------------------HHHH
T ss_pred eEeecCCCceEEEEEE--CCeeEEEEEecChhHHH-----------------------------------------HHHH
Confidence 6799999999999997 48999999986432110 0222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc--CCCHHH--HHHHHHHHHHHHHHH---
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--GLKVLD--LVNTGIQCSLRQLLE--- 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~~~--~~~~~i~~~l~~lh~--- 286 (487)
|.+.+.++ .+++ +.+++....+..++||||++|++|.++...... ..+... .+..++..++.|||+
T Consensus 51 E~~~l~~l-----~hp~--iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~ 123 (307)
T 2eva_A 51 ELRQLSRV-----NHPN--IVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123 (307)
T ss_dssp HHHHHHHC-----CCTT--BCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHhcC-----CCCC--cCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22222222 1222 344455455678999999999999887432211 133333 334678889999999
Q ss_pred CCccccCCCCCCeEEcCCCc-EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGK-LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~-i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
.|++|||+||+||+++.+|. ++|+|||++..+...... . .+++..++++....+..++++|+||+|+.++
T Consensus 124 ~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~----~-----~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 194 (307)
T 2eva_A 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN----N-----KGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194 (307)
T ss_dssp SCCCCCCCSGGGEEEETTTTEEEECCCCC---------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHH
T ss_pred CCeecCCCChhHEEEeCCCCEEEEccccccccccccccc----C-----CCCCceEChhhhCCCCCCcHHHHHHHHHHHH
Confidence 89999999999999998887 799999999866543211 1 1233334444444555678899999999999
Q ss_pred HHHHHh
Q 011399 366 NFFDDA 371 (487)
Q Consensus 366 ~~~~~~ 371 (487)
+++++.
T Consensus 195 el~~g~ 200 (307)
T 2eva_A 195 EVITRR 200 (307)
T ss_dssp HHHHTC
T ss_pred HHHHCC
Confidence 999853
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-24 Score=209.82 Aligned_cols=204 Identities=14% Similarity=0.194 Sum_probs=127.2
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
..-|... +.||+|+||+||+|++..+|+.||||+.+.... ....++.+++. ..|++++.+.+.+..
T Consensus 10 ~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~l~~----------l~h~~i~~~~~~~~~- 75 (284)
T 2a19_B 10 GMDFKEI--ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-KAEREVKALAK----------LDHVNIVHYNGCWDG- 75 (284)
T ss_dssp HHHEEEE--EEEECSSSCCEEEEEETTTCCEEEEEEEECCSG-GGHHHHHHHHH----------CCCTTBCCEEEEEEE-
T ss_pred cccccee--eeeccCCceEEEEEEEcCCCeEEEEEEeccccH-HHHHHHHHHHh----------CCCCCEEEEeeeEec-
Confidence 3345555 789999999999999988999999999975532 12222222211 124443333221000
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHH--HHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSL 281 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l 281 (487)
.++. +...............++||||++|++|.++..... ...+.. ..+..++..++
T Consensus 76 ----~~~~----------------~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l 135 (284)
T 2a19_B 76 ----FDYD----------------PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135 (284)
T ss_dssp ----EEEC-------------------------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHH
T ss_pred ----cccC----------------cccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence 0000 000000000001233689999999999998865432 334443 34557788899
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
.+||+.|++|+|+||+||+++.+|.++|+|||++..+...... . ...+++..++++....+..++++|+||+|
T Consensus 136 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG 208 (284)
T 2a19_B 136 DYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--T-----RSKGTLRYMSPEQISSQDYGKEVDLYALG 208 (284)
T ss_dssp HHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCC--C-----CCCSCCTTSCHHHHHCSCCCTHHHHHHHH
T ss_pred HHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccc--c-----ccCCcccccChhhhccCCCcchhhhHHHH
Confidence 9999999999999999999999999999999998776432110 0 00112222333334445567788999999
Q ss_pred HHHHHHHH
Q 011399 362 PALRNFFD 369 (487)
Q Consensus 362 ~~l~~~~~ 369 (487)
+.++++++
T Consensus 209 ~il~~l~~ 216 (284)
T 2a19_B 209 LILAELLH 216 (284)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 99999886
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.3e-24 Score=210.94 Aligned_cols=190 Identities=13% Similarity=0.190 Sum_probs=124.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+........ .+..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------------~~~~ 53 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-----------------------------------------QLHL 53 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSC-----------------------------------------CHHH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccchH-----------------------------------------HHHH
Confidence 78999999999999998899999999986331100 1222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|...+.++ ..+++ ++.++ .......++||||+ |++|.++........+. ...+..++..+|.|||+.|+
T Consensus 54 E~~~l~~l----~~h~~--i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 126 (330)
T 2izr_A 54 EYRFYKQL----GSGDG--IPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126 (330)
T ss_dssp HHHHHHHH----CSCTT--SCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHh----hCCCC--CCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 33333332 12232 22332 23345678999999 88999886543334444 34556788889999999999
Q ss_pred cccCCCCCCeEEcCCCc-----EEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 290 FHADPHPGNLLATPEGK-----LAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~-----i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+||||||+|||++.+|. ++|+|||++..+.......... .......+++..++++...-+..++++|+||+|+.
T Consensus 127 iHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 206 (330)
T 2izr_A 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHM 206 (330)
T ss_dssp ECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred eccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHH
Confidence 99999999999998887 9999999998653321100000 00000112233333444444445778899999999
Q ss_pred HHHHHHHh
Q 011399 364 LRNFFDDA 371 (487)
Q Consensus 364 l~~~~~~~ 371 (487)
+++++++.
T Consensus 207 l~ell~g~ 214 (330)
T 2izr_A 207 FMYFLRGS 214 (330)
T ss_dssp HHHHHHSS
T ss_pred HHHHhcCC
Confidence 99999853
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-24 Score=212.63 Aligned_cols=165 Identities=15% Similarity=0.157 Sum_probs=116.3
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
..|... +.||+|+||+||+|++..+|+.||||++++.....- +....
T Consensus 31 ~~y~i~--~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~------------------------------~~~~~- 77 (286)
T 3uqc_A 31 GRYRLL--IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPD------------------------------DVLQE- 77 (286)
T ss_dssp TTEEEE--EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCH------------------------------HHHHH-
T ss_pred CcEEEE--EEEcccCCeEEEEEEecCCCceEEEEEECcccccCH------------------------------HHHHH-
Confidence 345544 789999999999999988899999999976522110 00001
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSL 281 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l 281 (487)
+.+|+..+.++ .+++ +++++ ....+..++||||++|++|.++.. . +... ...+..++..+|
T Consensus 78 -----~~~e~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~--~-~~~~~~~~~i~~ql~~aL 142 (286)
T 3uqc_A 78 -----TLSRTLRLSRI-----DKPG--VARVLDVVHTRAGGLVVAEWIRGGSLQEVAD--T-SPSPVGAIRAMQSLAAAA 142 (286)
T ss_dssp -----HHHHHHHHHTC-----CCTT--BCCEEEEEEETTEEEEEEECCCEEEHHHHHT--T-CCCHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHhcC-----CCCC--cceeeEEEEECCcEEEEEEecCCCCHHHHHh--c-CCChHHHHHHHHHHHHHH
Confidence 22222222211 2222 22322 233466799999999999988742 2 2232 233457788899
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
.|+|++|++||||||+|||++.+|.++|+++|.... .++++|+||+|
T Consensus 143 ~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~---------------------------------~~~~~Di~slG 189 (286)
T 3uqc_A 143 DAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPD---------------------------------ANPQDDIRGIG 189 (286)
T ss_dssp HHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTT---------------------------------CCHHHHHHHHH
T ss_pred HHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCC---------------------------------CCchhHHHHHH
Confidence 999999999999999999999999999997776531 26678999999
Q ss_pred HHHHHHHHHh
Q 011399 362 PALRNFFDDA 371 (487)
Q Consensus 362 ~~l~~~~~~~ 371 (487)
+.+++++++.
T Consensus 190 ~il~elltg~ 199 (286)
T 3uqc_A 190 ASLYALLVNR 199 (286)
T ss_dssp HHHHHHHHSE
T ss_pred HHHHHHHHCC
Confidence 9999999854
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-25 Score=216.42 Aligned_cols=215 Identities=17% Similarity=0.173 Sum_probs=132.9
Q ss_pred hcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHH
Q 011399 101 QDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVG 180 (487)
Q Consensus 101 qd~~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~ 180 (487)
+...+.+++.++..+... +++...+...+.||+|+||.||+|+. +|+.||||+.........
T Consensus 9 ~~~~~~~~~~~l~~~~~~-----f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~----------- 70 (307)
T 2nru_A 9 DTRFHSFSFYELKNVTNN-----FDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITT----------- 70 (307)
T ss_dssp --CCEECCHHHHHHHTTT-----TCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCT-----------
T ss_pred CCCCCcccHHHHHHHHcc-----cccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcch-----------
Confidence 345566777766544321 11111222337899999999999986 689999999865321100
Q ss_pred HHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCc
Q 011399 181 FLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNE 258 (487)
Q Consensus 181 ~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~ 258 (487)
. +..+. +.+|...+.++ .+++ +++++ .......++||||++|++|.+
T Consensus 71 --------------~----~~~~~------~~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 119 (307)
T 2nru_A 71 --------------E----ELKQQ------FDQEIKVMAKC-----QHEN--LVELLGFSSDGDDLCLVYVYMPNGSLLD 119 (307)
T ss_dssp --------------T----THHHH------HHHHHHHHHHC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred --------------H----HHHHH------HHHHHHHHHhc-----CCCC--eEEEEEEEecCCceEEEEEecCCCcHHH
Confidence 0 00011 22222222222 1222 22222 233466799999999999988
Q ss_pred HHHHHh--cCCCHH--HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH-HHHHHHH
Q 011399 259 QVAIES--QGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHM 333 (487)
Q Consensus 259 ~~~~~~--~~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~ 333 (487)
+..... ...+.. ..+..++..+|.|||+.|++|+|+||+||+++.+|.++|+|||++........... .....+.
T Consensus 120 ~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~ 199 (307)
T 2nru_A 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTT 199 (307)
T ss_dssp HHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCG
T ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCc
Confidence 754322 224433 34557788899999999999999999999999999999999999876543110000 0001122
Q ss_pred HhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 334 VNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 334 ~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
.+..||.+ .|..+++.|+||+|+.+++++++
T Consensus 200 ~y~aPE~~------~~~~~~~~Dv~slG~il~~l~~g 230 (307)
T 2nru_A 200 AYMAPEAL------RGEITPKSDIYSFGVVLLEIITG 230 (307)
T ss_dssp GGCCHHHH------TTEECTHHHHHHHHHHHHHHHHC
T ss_pred CcCChHHh------cCCCCccchhHHHHHHHHHHHHC
Confidence 33445533 23457789999999999999985
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-23 Score=217.01 Aligned_cols=194 Identities=16% Similarity=0.204 Sum_probs=128.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+. |+.||||+++...... +|.+
T Consensus 199 ~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~-----------------------------------------~~~~ 235 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQ-----------------------------------------AFLA 235 (450)
T ss_dssp EEEEECSSEEEEEEEET--TEEEEEEEESSCTTSH-----------------------------------------HHHH
T ss_pred eeecCcCCeeEEEEEec--CCeEEEEEeCCchHHH-----------------------------------------HHHH
Confidence 68999999999999984 8899999997542110 1223
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC-CCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG-LKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
|++.+.++ .+..-+.+-.++.+.....++||||++|++|.++....... .+. ...+..++..++.|||++|++
T Consensus 236 E~~~l~~l----~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 311 (450)
T 1k9a_A 236 EASVMTQL----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311 (450)
T ss_dssp HHHHHHTC----CCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhc----cCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 33333322 11111222222223334679999999999999886543322 343 344567888899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH-
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD- 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~- 369 (487)
||||||+|||++.+|.+||+|||+++......... ...+..++++....+..+.++|+||+|+.++++++
T Consensus 312 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~---------~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~ 382 (450)
T 1k9a_A 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG---------KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 382 (450)
T ss_dssp CSCCCGGGEEECTTSCEEECCCTTCEECC---------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCHhhEEECCCCCEEEeeCCCcccccccccCC---------CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999998765432110 11223344444455666888999999999999997
Q ss_pred HhccCCCCcCcHHHHH
Q 011399 370 DALNSSVSELNFKTIV 385 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~ 385 (487)
+. .|+...+...+.
T Consensus 383 g~--~P~~~~~~~~~~ 396 (450)
T 1k9a_A 383 GR--VPYPRIPLKDVV 396 (450)
T ss_dssp TC--CSSTTSCTTTHH
T ss_pred CC--CCCCCCCHHHHH
Confidence 33 344444433333
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-24 Score=234.62 Aligned_cols=234 Identities=15% Similarity=0.129 Sum_probs=142.4
Q ss_pred cccccccccEEEEEEE--ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQL--KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~--~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|+||.||+|.+ +.+++.||||+++....... ..+ ++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~-------------------------------~~~------~~ 417 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-------------------------------LKD------EL 417 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGG-------------------------------GHH------HH
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHH-------------------------------HHH------HH
Confidence 4799999999999965 34678999999875422110 000 12
Q ss_pred HHHHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 212 VQEGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
.+|+..+.++. +++ +.+-.++ + ....++||||++|++|.++.... ...+. ...+..++..+|.|||++|
T Consensus 418 ~~E~~il~~l~-----hpnIv~l~~~~-~-~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~ 489 (635)
T 4fl3_A 418 LAEANVMQQLD-----NPYIVRMIGIC-E-AESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN 489 (635)
T ss_dssp HHHHHHHHHCC-----CTTBCCEEEEE-E-SSSEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC-----CCCEeeEEEEE-e-cCCEEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22333333321 222 1111122 1 34568999999999998875422 22333 3455678888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHH--HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGH--VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|+||||||+|||++.+|.+||+|||+++.+........... .....+..|| ....+..+.++|+||+|+.+++
T Consensus 490 iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE-----~~~~~~~~~~sDvwSlGv~l~e 564 (635)
T 4fl3_A 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-----CINYYKFSSKSDVWSFGVLMWE 564 (635)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHH-----HHHHCCCCHHHHHHHHHHHHHH
T ss_pred EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChh-----hhcCCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999987654321111111 0112233444 4445556888999999999999
Q ss_pred HHH-HhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCCh
Q 011399 367 FFD-DALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (487)
Q Consensus 367 ~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (487)
+++ +. .|+...+...+...+.... ...+..+|+.+..+++.+ ...||.-++
T Consensus 565 llt~G~--~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c-------l~~dP~~RP 617 (635)
T 4fl3_A 565 AFSYGQ--KPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC-------WTYDVENRP 617 (635)
T ss_dssp HHTTTC--CSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH-------TCSSTTTSC
T ss_pred HHhCCC--CCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH-------cCCCHhHCc
Confidence 997 33 4555555554444332211 122334556655555544 445555443
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-23 Score=202.41 Aligned_cols=192 Identities=15% Similarity=0.138 Sum_probs=125.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||+........ ++..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------------~~~~ 53 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP-----------------------------------------QLHI 53 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCC-----------------------------------------HHHH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchh-----------------------------------------HHHH
Confidence 78999999999999998899999999986432110 0222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH 291 (487)
|...+.++. +.+.+.....+.......++||||+ |++|.++........+.. ..+..++..++.|+|++|++|
T Consensus 54 e~~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 128 (296)
T 3uzp_A 54 ESKIYKMMQ----GGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 128 (296)
T ss_dssp HHHHHHHHT----TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhh----cCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 233333222 2222222223334455678999999 889988865433344443 445678888999999999999
Q ss_pred cCCCCCCeEEc---CCCcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 292 ADPHPGNLLAT---PEGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 292 ~Dlkp~Nili~---~~g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
+|+||+||+++ .++.++|+|||++..+.......... .......+++..++++....+..++++|+||+|+.++++
T Consensus 129 ~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l 208 (296)
T 3uzp_A 129 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYF 208 (296)
T ss_dssp SCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHH
Confidence 99999999994 78899999999998664331100000 000001122223333444444557788999999999999
Q ss_pred HHHh
Q 011399 368 FDDA 371 (487)
Q Consensus 368 ~~~~ 371 (487)
+++.
T Consensus 209 ~~g~ 212 (296)
T 3uzp_A 209 NLGS 212 (296)
T ss_dssp HHSS
T ss_pred HhCC
Confidence 9843
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.5e-23 Score=201.58 Aligned_cols=190 Identities=15% Similarity=0.201 Sum_probs=124.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|++..+|+.||||+........ .+.+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------------~~~~ 54 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP-----------------------------------------QLRD 54 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSC-----------------------------------------CHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCccH-----------------------------------------HHHH
Confidence 78999999999999998899999999886431110 1122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|.+.+.++. .++. +|.++ .......++||||+ |++|.++........+. ...+..++..++.|||+.|+
T Consensus 55 e~~~~~~l~----~~~~--i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 127 (298)
T 1csn_A 55 EYRTYKLLA----GCTG--IPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 127 (298)
T ss_dssp HHHHHHHTT----TCTT--CCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHHh----cCCC--CCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 222222221 1222 23332 23345678999999 98999886543333444 34556788889999999999
Q ss_pred cccCCCCCCeEEcCCCc-----EEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 290 FHADPHPGNLLATPEGK-----LAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~-----i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+|||+||+||+++.+|. ++|+|||++..+.......... .......+++..++++....+..++++|+||+|+.
T Consensus 128 vH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 207 (298)
T 1csn_A 128 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHV 207 (298)
T ss_dssp ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHH
Confidence 99999999999987776 9999999998664321100000 00000111222333334444455778999999999
Q ss_pred HHHHHHHh
Q 011399 364 LRNFFDDA 371 (487)
Q Consensus 364 l~~~~~~~ 371 (487)
+++++++.
T Consensus 208 l~el~~g~ 215 (298)
T 1csn_A 208 FMYFLRGS 215 (298)
T ss_dssp HHHHHHSS
T ss_pred HHHHHcCC
Confidence 99999753
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-24 Score=216.51 Aligned_cols=186 Identities=17% Similarity=0.121 Sum_probs=116.8
Q ss_pred cccccccccEEEEEEEccCCcEE----EEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIV----AVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~V----AVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|++..+|+.| |+|..+....... ..
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~--------------------------------~~------ 62 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--------------------------------NK------ 62 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------C--------------------------------HH------
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHH--------------------------------HH------
Confidence 78999999999999987777654 7777653211100 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE 286 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~ 286 (487)
.+.+|+..+.++. +++ +++++.. .....+++|||+++++|.++........+.. ..+..++..+|.|||+
T Consensus 63 ~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 135 (327)
T 3poz_A 63 EILDEAYVMASVD-----NPH--VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135 (327)
T ss_dssp HHHHHHHHHHHCC-----BTT--BCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-----CCC--EeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 1223333333321 222 2222221 1245789999999999988755433344443 3455778889999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
.|++|||+||+|||++.+|.++|+|||+++.+...... ...+...+..+..||.+ .-+..++++|+||+|+.++
T Consensus 136 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-----~~~~~~~~~Di~slG~il~ 210 (327)
T 3poz_A 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI-----LHRIYTHQSDVWSYGVTVW 210 (327)
T ss_dssp TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHH-----HHCCCCHHHHHHHHHHHHH
T ss_pred CCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHh-----ccCCCCchhhhhhhHHHHH
Confidence 99999999999999999999999999998765432111 11111111234445443 3455678899999999999
Q ss_pred HHHH
Q 011399 366 NFFD 369 (487)
Q Consensus 366 ~~~~ 369 (487)
++++
T Consensus 211 ellt 214 (327)
T 3poz_A 211 ELMT 214 (327)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9987
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-24 Score=223.60 Aligned_cols=261 Identities=11% Similarity=0.010 Sum_probs=150.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhccc-CCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIIT-TDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~-~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||+|+||.||+|++..+|+.||||+.+...... ..+++.++....... .+.| .++..+....
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~-~~~~~~~~~E~~~~~---~l~~~~~~~~~~~~~----------- 148 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLR---LLRGIKNQKQAKVHL----------- 148 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGG---GSTTCCSHHHHHHHT-----------
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCCcc-HHHHHHHHHHHHHHH---hhccCCCHHHHHHhc-----------
Confidence 67999999999999998899999999987432221 111222222222211 1122 2222221110
Q ss_pred HHHHHHHHHHHHhCCCCCeEecee---ee-------cCCCCceEEEeecCCCCcCcHHHHH---h-----cCCCHHHHHH
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDI---FW-------DYTSGKVLTMEWVEGVKLNEQVAIE---S-----QGLKVLDLVN 274 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v---~~-------~~~~~~~LvmE~~~G~~L~~~~~~~---~-----~~~~~~~~~~ 274 (487)
..+.....+.++.. +. ......+++|+++ +++|.++...- . ........+.
T Consensus 149 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~ 217 (413)
T 3dzo_A 149 ----------RFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLT 217 (413)
T ss_dssp ----------CBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHH
T ss_pred ----------ccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHH
Confidence 00000000111100 00 0012346777766 45787765311 0 0111223444
Q ss_pred HHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH-----HcC
Q 011399 275 TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY-----ALD 349 (487)
Q Consensus 275 ~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g 349 (487)
.++..+|.|||+.||+||||||+|||++.+|.+||+|||+++....... ..++ ..+..||.+..... ...
T Consensus 218 ~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~-~~~g----~~y~aPE~~~~~~~~~~~~~~~ 292 (413)
T 3dzo_A 218 LQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAV-SPIG----RGFAPPETTAERMLPFGQHHPT 292 (413)
T ss_dssp HHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEEEC-CCCC----TTTCCHHHHHHHTSTTGGGCCE
T ss_pred HHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCccc-cCCC----CceeCchhhhccccccccccCc
Confidence 7888999999999999999999999999999999999999887654311 1111 34455555432110 111
Q ss_pred CCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHh
Q 011399 350 FLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA 429 (487)
Q Consensus 350 ~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~ 429 (487)
..++++|+||+|+.+++++++. .|+...+... . ..+.+.
T Consensus 293 ~~~~~~DvwSlGvil~elltg~--~Pf~~~~~~~---------------~--------------------~~~~~~---- 331 (413)
T 3dzo_A 293 LMTFAFDTWTLGLAIYWIWCAD--LPNTDDAALG---------------G--------------------SEWIFR---- 331 (413)
T ss_dssp EECHHHHHHHHHHHHHHHHHSS--CCCCTTGGGS---------------C--------------------SGGGGS----
T ss_pred CCCchhhHHHHHHHHHHHHHCC--CCCCCcchhh---------------h--------------------HHHHHh----
Confidence 2355789999999999999843 2332221000 0 000000
Q ss_pred HhHHHHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 430 SYPYFAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 430 ~~p~~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.....++.+++.+.+||..||+.|++..+.+.|+||.
T Consensus 332 --------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~ 368 (413)
T 3dzo_A 332 --------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 368 (413)
T ss_dssp --------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred --------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence 0013467888999999999999999999999999984
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-25 Score=228.55 Aligned_cols=248 Identities=14% Similarity=0.088 Sum_probs=143.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+|+..... +|+.||||++.+........++.+++.+. .|+|++.+++
T Consensus 30 ~~LG~G~~G~V~~~~~~-~~~~vAvK~~~~~~~~~~~~E~~~l~~l~---------~HpnIv~l~~-------------- 85 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESD---------EHPNVIRYFC-------------- 85 (432)
T ss_dssp EEEEECGGGCEEEEEES-SSSEEEEEEECTTTEEECHHHHHHHHHSC---------CCTTBCCEEE--------------
T ss_pred CeeecCcCEEEEEEEEe-CCeEEEEEEECHHHHHHHHHHHHHHHhcc---------CCCCcCeEEE--------------
Confidence 68999999997654444 89999999987653332222332222110 1333333221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~l~~lh~~givH 291 (487)
+.......+||||||+| +|.++........ .....+..++..||.|||+.||+|
T Consensus 86 -----------------------~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 141 (432)
T 3p23_A 86 -----------------------TEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVH 141 (432)
T ss_dssp -----------------------EEEETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred -----------------------EEecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEe
Confidence 12223456899999976 7776643322221 223456678899999999999999
Q ss_pred cCCCCCCeEEcC---CC--cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH---cCCCCCCCCcchHHHH
Q 011399 292 ADPHPGNLLATP---EG--KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA---LDFLSPDVDVTPIVPA 363 (487)
Q Consensus 292 ~Dlkp~Nili~~---~g--~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~Di~sl~~~ 363 (487)
|||||+|||++. +| +++|+|||+++.+...... ... .....+++..+++++.. .+..+.++|+||+|+.
T Consensus 142 rDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~-~~~--~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~i 218 (432)
T 3p23_A 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS-FSR--RSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV 218 (432)
T ss_dssp CCCSTTSEEECCCBTTTBCCEEECCTTEEECC---------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHH
T ss_pred CCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc-eee--ccccCCCcCccChhhhhcccccCCCcHHHHHHHHHH
Confidence 999999999953 33 5889999999887644211 000 01111223333333322 1223456899999999
Q ss_pred HHHHHH-HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 364 LRNFFD-DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 364 l~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
++++++ +. .++....... ........... ...|. ...
T Consensus 219 l~ellt~g~--~pf~~~~~~~----~~~~~~~~~~~--------------------~~~~~----------------~~~ 256 (432)
T 3p23_A 219 FYYVISEGS--HPFGKSLQRQ----ANILLGACSLD--------------------CLHPE----------------KHE 256 (432)
T ss_dssp HHHHHTTSC--BTTBSTTTHH----HHHHTTCCCCT--------------------TSCTT----------------CHH
T ss_pred HHHHHcCCC--CCcchhhHHH----HHHHhccCCcc--------------------ccCcc----------------ccc
Confidence 999987 32 2222211110 00000000000 00010 011
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
++.+++.+.+||..||..|++..+.+.|+||.
T Consensus 257 ~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~ 288 (432)
T 3p23_A 257 DVIARELIEKMIAMDPQKRPSAKHVLKHPFFW 288 (432)
T ss_dssp HHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTC
T ss_pred cHHHHHHHHHHHhCCHhhCCCHHHHHhCcccc
Confidence 34567899999999999999999999999994
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-25 Score=215.98 Aligned_cols=187 Identities=17% Similarity=0.178 Sum_probs=120.3
Q ss_pred cccccccccEEEEEE----EccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQ----LKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~----~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|+ ...+|+.||||+.++..... .. +.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------~~--------~~----- 69 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN------------------------HI--------AD----- 69 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----C------------------------CH--------HH-----
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccch------------------------hH--------HH-----
Confidence 779999999999999 45589999999997542110 00 01
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceee---ec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIF---WD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQ 283 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~---~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~ 283 (487)
+.+|...+.++ . +++ +++++ .. .....++||||++|++|.++........+... .+..++..++.+
T Consensus 70 -~~~E~~~l~~l----~-h~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 141 (302)
T 4e5w_A 70 -LKKEIEILRNL----Y-HEN--IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141 (302)
T ss_dssp -HHHHHHHHHTC----C-CTT--BCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhC----C-CCC--eeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 11222222222 1 222 22222 11 12446899999999999988654444455433 445778889999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
||+.|++|+|+||+||+++.+|.++|+|||++..+...... .......+..+..||.+ ..+..++++|+||+|
T Consensus 142 lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG 216 (302)
T 4e5w_A 142 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECL-----MQSKFYIASDVWSFG 216 (302)
T ss_dssp HHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHH-----HHCEEEHHHHHHHHH
T ss_pred hhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeee-----cCCCCCcchhHHHHH
Confidence 99999999999999999999999999999999876433100 00000011123445443 233345678999999
Q ss_pred HHHHHHHHH
Q 011399 362 PALRNFFDD 370 (487)
Q Consensus 362 ~~l~~~~~~ 370 (487)
+.+++++++
T Consensus 217 ~il~~l~~g 225 (302)
T 4e5w_A 217 VTLHELLTY 225 (302)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHc
Confidence 999999874
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-24 Score=230.46 Aligned_cols=225 Identities=14% Similarity=0.128 Sum_probs=135.4
Q ss_pred ccccccccEEEEEEEc--cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 135 PIAAASLGQVYKAQLK--YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.||+|+||+||+|.++ .++..||||+++....... .+. +...+..+....|+|++.++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~---~~~---~~~E~~il~~l~hpniv~l~-------------- 402 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD---TEE---MMREAQIMHQLDNPYIVRLI-------------- 402 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTT---HHH---HHHHHHHHTTCCCTTBCCEE--------------
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHH---HHH---HHHHHHHHHhCCCCCEeeEE--------------
Confidence 6999999999999875 3567899999976422110 000 00000011111233333222
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
.++. ....++||||++|++|.++........+. ...+..++..||.|||+.||+
T Consensus 403 ----------------------~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ii 458 (613)
T 2ozo_A 403 ----------------------GVCQ--AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458 (613)
T ss_dssp ----------------------EEEE--SSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ----------------------EEec--cCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 1121 24578999999999998875333333443 344567788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHH--HHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV--HMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
||||||+|||++.+|.+||+|||+++.+............. ...+..|| ....+..+.++|+||+|+.+++++
T Consensus 459 HrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE-----~~~~~~~~~~sDvwSlGv~l~ell 533 (613)
T 2ozo_A 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE-----CINFRKFSSRSDVWSYGVTMWEAL 533 (613)
T ss_dssp CSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHH-----HHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred cCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHh-----hhcCCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876542211111000 11233444 344456688899999999999999
Q ss_pred H-HhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHH
Q 011399 369 D-DALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSL 410 (487)
Q Consensus 369 ~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l 410 (487)
+ +. .|+...+...+...+.... ...+...|+.+..+++.+
T Consensus 534 t~G~--~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c 575 (613)
T 2ozo_A 534 SYGQ--KPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDC 575 (613)
T ss_dssp TTSC--CTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHT
T ss_pred HCCC--CCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence 6 32 3555544444443332211 122334555555444433
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-25 Score=218.81 Aligned_cols=192 Identities=16% Similarity=0.067 Sum_probs=120.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++. |+.||||+++......... .+ .+..+....|+|++++++
T Consensus 30 ~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~----~~----E~~~l~~l~hpniv~~~~-------------- 85 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQN----EY----EVYSLPGMKHENILQFIG-------------- 85 (322)
T ss_dssp EEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHH----HH----HHHTSTTCCCTTBCCEEE--------------
T ss_pred heecccCceEEEEEEEC--CCEEEEEEeecCchHHHHH----HH----HHHHHhcCCCCCchhhcc--------------
Confidence 67999999999999874 8999999986442221100 00 111111223444333222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC---CCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC---
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY---TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY--- 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--- 287 (487)
++... ....++||||++|++|.++.............+..++..++.|||+.
T Consensus 86 ----------------------~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~ 143 (322)
T 3soc_A 86 ----------------------AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPG 143 (322)
T ss_dssp ----------------------EEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred ----------------------eeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccc
Confidence 11111 12358999999999999885443333334455667888999999999
Q ss_pred -------CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 288 -------GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 288 -------givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
|++|||+||+|||++.++.+||+|||++..+...... .......+..+..||.+..........+.++|+||
T Consensus 144 l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws 223 (322)
T 3soc_A 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYA 223 (322)
T ss_dssp ETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHH
T ss_pred cccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHH
Confidence 9999999999999999999999999999765432110 00001112334455543210000001134569999
Q ss_pred HHHHHHHHHHHh
Q 011399 360 IVPALRNFFDDA 371 (487)
Q Consensus 360 l~~~l~~~~~~~ 371 (487)
+|+.+++++++.
T Consensus 224 lG~il~el~tg~ 235 (322)
T 3soc_A 224 MGLVLWELASRC 235 (322)
T ss_dssp HHHHHHHHHTTB
T ss_pred HHHHHHHHHhCC
Confidence 999999999853
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-23 Score=203.65 Aligned_cols=260 Identities=17% Similarity=0.196 Sum_probs=153.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++. +|+.||||+++......- ..+. +.+
T Consensus 34 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-------------------------------~~~~------~~~ 75 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQ-------------------------------TLDS------YRN 75 (313)
T ss_dssp EEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHH-------------------------------HHHH------HHH
T ss_pred EEecCCCCEEEEEEEcC-CCcEEEEEEecccccccc-------------------------------chHH------HHH
Confidence 68999999999999987 799999999864321100 0011 233
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++.+. ++. +.+++ .......++||| +.|++|.++.... ...+. ...+..++..+|.|||+.|+
T Consensus 76 E~~~l~~l~~~---~~~--iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i 148 (313)
T 3cek_A 76 EIAYLNKLQQH---SDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGI 148 (313)
T ss_dssp HHHHHHHHGGG---CTT--BCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcccc---CCc--eEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 34444444321 122 22222 233456789999 5677888774432 23343 34456788889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHH-HHHHHHHhcCHHHHHHH------HHHcCCCCCCCCcchHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARD------YYALDFLSPDVDVTPIVP 362 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~g~~~~~~Di~sl~~ 362 (487)
+|+|+||+||+++ +|.++|+|||++..+......... ....+..+..||.+... -...+..+.++|+||+|+
T Consensus 149 vH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~ 227 (313)
T 3cek_A 149 VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 227 (313)
T ss_dssp CCCCCCGGGEEEE-TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHH
T ss_pred eecCCCcccEEEE-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHH
Confidence 9999999999995 589999999999987654321111 11122334444443210 001134566789999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCC
Q 011399 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDP 442 (487)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~ 442 (487)
.+++++++. .++...... ...+ . ...++.... ......
T Consensus 228 il~el~~g~--~pf~~~~~~--~~~~-------------------~---------~~~~~~~~~----------~~~~~~ 265 (313)
T 3cek_A 228 ILYYMTYGK--TPFQQIINQ--ISKL-------------------H---------AIIDPNHEI----------EFPDIP 265 (313)
T ss_dssp HHHHHHHSS--CTTTTCCSH--HHHH-------------------H---------HHHCTTSCC----------CCCCCS
T ss_pred HHHHHHhCC--CchhhHHHH--HHHH-------------------H---------HHHhccccc----------CCcccc
Confidence 999998743 233221100 0000 0 001111110 001134
Q ss_pred CHHHHHHHHHHHhhcCcccccccchhhcccccccccccc
Q 011399 443 NPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCD 481 (487)
Q Consensus 443 ~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~ 481 (487)
++.+++.+.+||..||..|++..+.+.|+||.....++.
T Consensus 266 ~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 304 (313)
T 3cek_A 266 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304 (313)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-----
T ss_pred hHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCchh
Confidence 678889999999999999999999999999987666553
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-23 Score=205.87 Aligned_cols=188 Identities=15% Similarity=0.165 Sum_probs=110.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++. ..||||+.+...... .+. +. +.+
T Consensus 30 ~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~--~~~-----------------------------~~------~~~ 69 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTP--QQL-----------------------------QA------FKN 69 (289)
T ss_dssp EEEEECSSEEEEEEESS---SEEEEEEESCSSCCH--HHH-----------------------------HH------HHH
T ss_pred eEecCCCCeEEEEEEEc---CceEEEEEeccCCCH--HHH-----------------------------HH------HHH
Confidence 78999999999999864 469999987442211 000 01 112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~giv 290 (487)
|...+.++ .+++ +..++. ......++||||++|++|.+.........+.. ..+..++..+|.+||+.|++
T Consensus 70 E~~~l~~l-----~h~~--iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~ 142 (289)
T 3og7_A 70 EVGVLRKT-----RHVN--ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 142 (289)
T ss_dssp HHHHHTTC-----CCTT--BCCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhC-----CCCc--EEEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 22222211 1222 122222 23355789999999999987653333334433 34557788899999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|+|+||+||+++.+|.++|+|||++......... .......+..+..||.+... ..+..+.+.|+||+|+.++++++
T Consensus 143 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~Di~slG~il~el~~ 220 (289)
T 3og7_A 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ--DSNPYSFQSDVYAFGIVLYELMT 220 (289)
T ss_dssp CSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC------CCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhccc--CCCCCCcccchHHHHHHHHHHHH
Confidence 9999999999999999999999999866532111 11111112233444433110 12334567899999999999998
Q ss_pred H
Q 011399 370 D 370 (487)
Q Consensus 370 ~ 370 (487)
+
T Consensus 221 g 221 (289)
T 3og7_A 221 G 221 (289)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-24 Score=216.80 Aligned_cols=186 Identities=15% Similarity=0.135 Sum_probs=122.4
Q ss_pred cccccccccEEEEEEEccCCcE----EEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSGQI----VAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~----VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|++..+|+. ||+|+........ ...
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~------------------------~~~-------------- 60 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ------------------------SFQ-------------- 60 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCS------------------------CBC--------------
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHH------------------------HHH--------------
Confidence 6899999999999999877765 7777764321100 000
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecC-CCCceEEEeecCCCCcCcHHHHH--hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIE--SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
.+..|...+.++ .+++ +++++.-. ....++||||++|++|.+..... .........+..++..+|.|||+
T Consensus 61 ~~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 133 (325)
T 3kex_A 61 AVTDHMLAIGSL-----DHAH--IVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133 (325)
T ss_dssp SCCHHHHHHHTC-----CCTT--BCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-----CCCC--cCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 011111111111 1222 22222211 35578999999999998875432 34455666677889999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
.|++|||+||+|||++.+|.++|+|||+++.+........ ........+..||. ...+..++++|+||+|+.++
T Consensus 134 ~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~slG~~l~ 208 (325)
T 3kex_A 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES-----IHFGKYTHQSDVWSYGVTVW 208 (325)
T ss_dssp TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHH-----HHHCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHH-----hccCCCChhhHhHHhHHHHH
Confidence 9999999999999999999999999999987644321100 11111122334443 34455678899999999999
Q ss_pred HHHH
Q 011399 366 NFFD 369 (487)
Q Consensus 366 ~~~~ 369 (487)
++++
T Consensus 209 el~~ 212 (325)
T 3kex_A 209 ELMT 212 (325)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9997
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-24 Score=212.00 Aligned_cols=260 Identities=13% Similarity=0.049 Sum_probs=164.4
Q ss_pred CCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 121 g~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
+..+.+.|... +.||+|+||.||+|++..+|+.||||+++...... ...
T Consensus 38 ~~~~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------------~~~--------- 86 (320)
T 3a99_A 38 KEPLESQYQVG--PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD--------------------WGE--------- 86 (320)
T ss_dssp --CCTTTEEEE--EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCC--------------------EEE---------
T ss_pred cCCccCceEEE--EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchh--------------------hhh---------
Confidence 33445556555 78999999999999998899999999986431110 000
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCC-CCcCcHHHHHhcCCCH--HHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEG-VKLNEQVAIESQGLKV--LDLVNT 275 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G-~~L~~~~~~~~~~~~~--~~~~~~ 275 (487)
+..+-.+..|...+.++.. .++. +++++ .......++|||++.+ ++|.++.... ...+. ...+..
T Consensus 87 ----~~~~~~~~~E~~~l~~l~~---~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~ 156 (320)
T 3a99_A 87 ----LPNGTRVPMEVVLLKKVSS---GFSG--VIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFW 156 (320)
T ss_dssp ----CTTCCEEEHHHHHHHHHCS---SSCS--BCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHH
T ss_pred ----hhhhhHHHHHHHHHHhhcc---CCCC--ceEEEEEEecCCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHH
Confidence 0000012223333333221 1222 22332 2334567899999986 7888774432 23343 344567
Q ss_pred HHHHHHHHHHHCCccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 011399 276 GIQCSLRQLLEYGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (487)
Q Consensus 276 ~i~~~l~~lh~~givH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (487)
++..+|.|||+.|++|||+||+|||++ .+|.++|+|||++..+......... .+..+..||.+. ...+.+++
T Consensus 157 qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~---gt~~y~aPE~~~----~~~~~~~~ 229 (320)
T 3a99_A 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPPEWIR----YHRYHGRS 229 (320)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCC---SCGGGSCHHHHH----HSCBCHHH
T ss_pred HHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCC---CCccCCChHHhc----cCCCCCcc
Confidence 888899999999999999999999999 7899999999999876543211111 122344455432 22333567
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHH
Q 011399 355 VDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYF 434 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~ 434 (487)
+|+||+|+.+++++++. .++...+ . + .. + ...
T Consensus 230 ~Di~slG~il~el~~g~--~pf~~~~--~----~---~~---------------------~-----~~~----------- 261 (320)
T 3a99_A 230 AAVWSLGILLYDMVCGD--IPFEHDE--E----I---IR---------------------G-----QVF----------- 261 (320)
T ss_dssp HHHHHHHHHHHHHHHSS--CSCCSHH--H----H---HH---------------------C-----CCC-----------
T ss_pred chHHhHHHHHHHHHHCC--CCCCChh--h----h---hc---------------------c-----ccc-----------
Confidence 89999999999999843 2322110 0 0 00 0 000
Q ss_pred HHHhccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 435 AKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 435 ~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
.....++.+++.+.+||..||..|++..+.+.|+||.-...+
T Consensus 262 ---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 262 ---FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303 (320)
T ss_dssp ---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred ---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence 012356788899999999999999999999999999765443
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-24 Score=222.44 Aligned_cols=192 Identities=16% Similarity=0.172 Sum_probs=127.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||+....... . ++..
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------------------------~-----------------~~~~ 51 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------------------------P-----------------QLLY 51 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------------------------C-----------------CHHH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------------------------H-----------------HHHH
Confidence 7799999999999999889999999987633110 0 1122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
|.+.+.. +.+.+.+.....+.......+|||||+ |++|.++.......++. ...+..++..+|.|||+.||+|
T Consensus 52 E~~il~~----L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH 126 (483)
T 3sv0_A 52 ESKIYRI----LQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 126 (483)
T ss_dssp HHHHHHH----TTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHH----hcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 2222222 223333333344445566779999999 88999886543334444 3445678888999999999999
Q ss_pred cCCCCCCeEE---cCCCcEEEEecCCCCCCCHHHHHHHHHH-HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 292 ADPHPGNLLA---TPEGKLAFLDFGMMSETPEEARFAIIGH-VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 292 ~Dlkp~Nili---~~~g~i~l~DFGla~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|||||+|||+ +.++.++|+|||+++.+........... ......+.+.+++++...-...+.++|+||+|+.++++
T Consensus 127 rDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~el 206 (483)
T 3sv0_A 127 RDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYF 206 (483)
T ss_dssp CCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHH
Confidence 9999999999 5889999999999986643211000000 00001122233333444444457788999999999999
Q ss_pred HHHh
Q 011399 368 FDDA 371 (487)
Q Consensus 368 ~~~~ 371 (487)
+++.
T Consensus 207 ltG~ 210 (483)
T 3sv0_A 207 LRGS 210 (483)
T ss_dssp HHSS
T ss_pred HhCC
Confidence 9853
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-23 Score=210.63 Aligned_cols=228 Identities=16% Similarity=0.148 Sum_probs=139.2
Q ss_pred cccccccccEEEEEEEcc-------CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-------SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-------~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
+.||+|+||.||+|++.. ++..||||+++....... . ..
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~-----------------------------~~-- 120 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD---L-----------------------------SD-- 120 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHH---H-----------------------------HH--
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHH---H-----------------------------HH--
Confidence 789999999999999753 346899999975422210 0 01
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---------------cCCCH--
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLKV-- 269 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~-- 269 (487)
+.+|.+.+.++ ..++.|.-..-+....+..++||||++|++|.++..... ...+.
T Consensus 121 ----~~~E~~~l~~l----~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 192 (382)
T 3tt0_A 121 ----LISEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192 (382)
T ss_dssp ----HHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHH
T ss_pred ----HHHHHHHHHHh----cCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHH
Confidence 12222222222 122322111112233456799999999999998855432 11333
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHc
Q 011399 270 LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYAL 348 (487)
Q Consensus 270 ~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 348 (487)
...+..++..+|.|||+.|++||||||+|||++.+|.++|+|||++..+...... .......+..+..||. ..-
T Consensus 193 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~-----~~~ 267 (382)
T 3tt0_A 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEA-----LFD 267 (382)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHH-----HHS
T ss_pred HHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHH-----hcC
Confidence 3445678888999999999999999999999999999999999999866432100 0000000122344443 344
Q ss_pred CCCCCCCCcchHHHHHHHHHH-HhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHH
Q 011399 349 DFLSPDVDVTPIVPALRNFFD-DALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSL 410 (487)
Q Consensus 349 g~~~~~~Di~sl~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l 410 (487)
+..++++|+||+|+.++++++ +. .++...+...+...+.... ...+...|+.+..+++.+
T Consensus 268 ~~~~~~~DiwslG~il~ellt~g~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 329 (382)
T 3tt0_A 268 RIYTHQSDVWSFGVLLWEIFTLGG--SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 329 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSC--CSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence 556788999999999999997 32 3555555554443332211 122334455554444443
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=8.7e-25 Score=211.97 Aligned_cols=198 Identities=16% Similarity=0.193 Sum_probs=128.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+.. +++.||||+.+.+.... +. +.+
T Consensus 19 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----------------------------------~~------~~~ 57 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSP----------------------------------DA------FLA 57 (279)
T ss_dssp EEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCH----------------------------------HH------HHH
T ss_pred eeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccH----------------------------------HH------HHH
Confidence 68999999999999987 78899999987542110 00 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++. +++ +++++.. ..+..++||||++|++|.++..... ...+. ...+..++..++.++|+.|+
T Consensus 58 E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 130 (279)
T 1qpc_A 58 EANLMKQLQ-----HQR--LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130 (279)
T ss_dssp HHHHHHHCC-----CTT--BCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhCC-----CcC--cceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 333322221 222 1222221 1355789999999999988754321 13443 34456788889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++..+.........+......+..||.+ ..+..++++|+||+|+.++++++
T Consensus 131 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~el~~ 205 (279)
T 1qpc_A 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-----NYGTFTIKSDVWSFGILLTEIVT 205 (279)
T ss_dssp ECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHH-----HHCEECHHHHHHHHHHHHHHHHT
T ss_pred eccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhh-----ccCCCCchhhhHHHHHHHHHHHh
Confidence 9999999999999999999999999987643211000000001123344433 33445778899999999999997
Q ss_pred -HhccCCCCcCcHHHHHH
Q 011399 370 -DALNSSVSELNFKTIVD 386 (487)
Q Consensus 370 -~~~~~~~~~~~~~~~~~ 386 (487)
+. .++...+...+..
T Consensus 206 ~g~--~p~~~~~~~~~~~ 221 (279)
T 1qpc_A 206 HGR--IPYPGMTNPEVIQ 221 (279)
T ss_dssp TTC--CSSTTCCHHHHHH
T ss_pred CCC--CCCcccCHHHHHH
Confidence 33 3444445444443
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-24 Score=212.41 Aligned_cols=223 Identities=17% Similarity=0.185 Sum_probs=139.8
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+.+...... +. +.+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~------~~~ 58 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV----------------------------------EE------FLK 58 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHH----------------------------------HH------HHH
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCHHHH----------------------------------HH------HHH
Confidence 67999999999999999889999999987542211 00 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
|...+.++. +++ +++++ .......++||||++|++|.++.... ....+.. ..+..++..++.++|+.|
T Consensus 59 E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 131 (288)
T 3kfa_A 59 EAAVMKEIK-----HPN--LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131 (288)
T ss_dssp HHHHHHHCC-----CTT--BCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCC-----CCC--EeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC
Confidence 222222221 222 22222 23345679999999999998875432 1223433 344577888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++|+|+||+||+++.+|.++|+|||++............+......+..||.+ ..+..+++.|+||+|+.+++++
T Consensus 132 i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~ll 206 (288)
T 3kfa_A 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKFSIKSDVWAFGVLLWEIA 206 (288)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHH-----HHCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhh-----ccCCCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999987653311000000001123444443 3445577899999999999999
Q ss_pred H-HhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHH
Q 011399 369 D-DALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSL 410 (487)
Q Consensus 369 ~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l 410 (487)
+ +. .++...+...+...+.... ...+...|+.+..+++.+
T Consensus 207 ~~g~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 248 (288)
T 3kfa_A 207 TYGM--SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 248 (288)
T ss_dssp TTSC--CSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred hCCC--CCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHH
Confidence 7 33 2333333333333222111 122344566665555554
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-24 Score=211.15 Aligned_cols=193 Identities=16% Similarity=0.129 Sum_probs=118.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+...+|+.||||++........ .. +.+
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----~~-----------------------------------~~~ 75 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR----EE-----------------------------------AQR 75 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHH----HH-----------------------------------HHH
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHH----HH-----------------------------------HHH
Confidence 789999999999999988999999998864322110 00 111
Q ss_pred HHHHHHHHHHHhCCCCCe-Eeceeee---cCCCCceEEEeecCCCCcCcHHHHH---hcCCCHH--HHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFW---DYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKVL--DLVNTGIQCSLRQL 284 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~---~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~~--~~~~~~i~~~l~~l 284 (487)
|+..+.++ .++++ .+-..+. ......++||||++|++|.++.... ....+.. ..+..++..+|.||
T Consensus 76 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L 150 (317)
T 2buj_A 76 EADMHRLF-----NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150 (317)
T ss_dssp HHHHHHTC-----CCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhc-----CCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22222211 11211 1111111 1223568999999999998875542 2224443 34557788899999
Q ss_pred HHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH---HHHHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcc
Q 011399 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE---ARFAIIGHVVHMVNRDYEAMARDYYALD---FLSPDVDVT 358 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~Di~ 358 (487)
|+.|++|+|+||+||+++.+|.++|+|||++...... ..............+.+..++++.+... ..++++|+|
T Consensus 151 H~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~ 230 (317)
T 2buj_A 151 HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVW 230 (317)
T ss_dssp HHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHH
T ss_pred HhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHH
Confidence 9999999999999999999999999999998876421 1111110001111122222333222111 135678999
Q ss_pred hHHHHHHHHHHH
Q 011399 359 PIVPALRNFFDD 370 (487)
Q Consensus 359 sl~~~l~~~~~~ 370 (487)
|+|+.+++++++
T Consensus 231 slG~il~el~~g 242 (317)
T 2buj_A 231 SLGCVLYAMMFG 242 (317)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhC
Confidence 999999998873
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-23 Score=205.17 Aligned_cols=189 Identities=15% Similarity=0.125 Sum_probs=125.4
Q ss_pred cccccccccEEEEEEE-----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQL-----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~-----~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|++ ..+|+.||||+.++...... .+.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~~---- 72 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE--------------------------------REA---- 72 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH--------------------------------HHH----
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHH--------------------------------HHH----
Confidence 6799999999999985 34678999999975422110 011
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-----------------CCCHH-
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-----------------GLKVL- 270 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-----------------~~~~~- 270 (487)
+.+|...+.++ ..++++.-..-+....+..++||||++|++|.++...... ..+..
T Consensus 73 --~~~E~~~l~~l----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (313)
T 1t46_A 73 --LMSELKVLSYL----GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146 (313)
T ss_dssp --HHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHH
T ss_pred --HHHHHHHHhhc----ccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHH
Confidence 22333333333 2233322111223345667999999999999987554321 13333
Q ss_pred -HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHc
Q 011399 271 -DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYAL 348 (487)
Q Consensus 271 -~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 348 (487)
..+..++..++.|+|+.|++|+|+||+||+++.+|.++|+|||++..+.........+ ...+..+..||.+ ..
T Consensus 147 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~ 221 (313)
T 1t46_A 147 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-----FN 221 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH-----HH
T ss_pred HHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHh-----cC
Confidence 3445778889999999999999999999999999999999999998765432100000 0001123445543 34
Q ss_pred CCCCCCCCcchHHHHHHHHHH
Q 011399 349 DFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 349 g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+..++++|+||+|+.++++++
T Consensus 222 ~~~~~~~Di~slG~il~ellt 242 (313)
T 1t46_A 222 CVYTFESDVWSYGIFLWELFS 242 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHHHHHh
Confidence 456788999999999999997
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-23 Score=220.63 Aligned_cols=200 Identities=17% Similarity=0.192 Sum_probs=133.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++. ++..||||+++++.... + +|.+
T Consensus 273 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----------------------------------~------~~~~ 311 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP----------------------------------E------AFLQ 311 (535)
T ss_dssp EEEEECSSEEEEEEEET-TTEEEEEEEECTTSSCH----------------------------------H------HHHH
T ss_pred eecccCCCeEEEEEEEC-CCceEEEEEeCCCCCCH----------------------------------H------HHHH
Confidence 67999999999999997 67889999997642110 0 1233
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|++.+.++. +++ +.+-.++. ....+|||||++|++|.++..... ...+. ...+..++..+|.|||++||
T Consensus 312 E~~~l~~l~-----hpniv~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 384 (535)
T 2h8h_A 312 EAQVMKKLR-----HEKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 384 (535)
T ss_dssp HHHHHHHCC-----CTTBCCEEEEEC--SSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCC-----CCCEeeEEEEEe--eccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 444333331 122 11112222 256789999999999998865432 22443 33455778889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+||||||+|||++.++.+||+|||+++.+.........+......+..|| ....+..+.++|+||+|+.++++++
T Consensus 385 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~sDvwSlGv~l~el~t 459 (535)
T 2h8h_A 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-----AALYGRFTIKSDVWSFGILLTELTT 459 (535)
T ss_dssp CCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHH-----HHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHH-----HhccCCCCchhhHHHHHHHHHHHHh
Confidence 99999999999999999999999999987654221111111112233444 3445566888999999999999987
Q ss_pred HhccCCCCcCcHHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDG 387 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~ 387 (487)
. ...++...+...+...
T Consensus 460 ~-g~~P~~~~~~~~~~~~ 476 (535)
T 2h8h_A 460 K-GRVPYPGMVNREVLDQ 476 (535)
T ss_dssp T-TCCSSTTCCHHHHHHH
T ss_pred C-CCCCCCCCCHHHHHHH
Confidence 2 1235555555444443
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.2e-25 Score=216.00 Aligned_cols=186 Identities=18% Similarity=0.190 Sum_probs=121.3
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|++. .+|+.||||+.+...... +. +.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~---~~------------------------------ 72 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS---EL---RD------------------------------ 72 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHH---HH---HH------------------------------
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHH---HH---HH------------------------------
Confidence 67999999999999973 356899999997543211 00 00
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHhc---------------------
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQ--------------------- 265 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~--------------------- 265 (487)
+.+|.+.+.++ .+++ +.+++ ....+..++||||++|++|.++......
T Consensus 73 --~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (314)
T 2ivs_A 73 --LLSEFNVLKQV-----NHPH--VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143 (314)
T ss_dssp --HHHHHHHHTTC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC---------------
T ss_pred --HHHHHHHHhhC-----CCCc--eeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCccccccccccccccccc
Confidence 11222222211 1222 22222 2334667999999999999887543221
Q ss_pred --CCC--HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHH
Q 011399 266 --GLK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEA 340 (487)
Q Consensus 266 --~~~--~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~ 340 (487)
..+ ....+..++..++.|||++|++|+|+||+||+++.+|.++|+|||++..+....... .........+..||.
T Consensus 144 ~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 223 (314)
T 2ivs_A 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIES 223 (314)
T ss_dssp -CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHH
T ss_pred ccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhh
Confidence 122 234456788889999999999999999999999999999999999997664321000 000000122344444
Q ss_pred HHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 341 MARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 341 ~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+ .-+..++++|+||+|+.++++++
T Consensus 224 ~-----~~~~~~~~~Di~slG~il~el~t 247 (314)
T 2ivs_A 224 L-----FDHIYTTQSDVWSFGVLLWEIVT 247 (314)
T ss_dssp H-----HHCEECHHHHHHHHHHHHHHHHT
T ss_pred h-----cCCCcCchhhHHHHHHHHHHHHh
Confidence 3 33445778999999999999997
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-25 Score=219.80 Aligned_cols=189 Identities=16% Similarity=0.148 Sum_probs=121.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++. +|+.||||+++......... . +......+....|+|++.+++
T Consensus 36 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~--~----~~~e~~~l~~l~h~~iv~~~~-------------- 94 (326)
T 3uim_A 36 NILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGEL--Q----FQTEVEMISMAVHRNLLRLRG-------------- 94 (326)
T ss_dssp TEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCC--H----HHHHHHGGGTCCCTTBCCCCE--------------
T ss_pred eeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHH--H----HHHHHHHHHhccCCCccceEE--------------
Confidence 78999999999999976 89999999987542211000 0 000111111112332222211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---CCC--HHHHHHHHHHHHHHHHHHC-
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---GLK--VLDLVNTGIQCSLRQLLEY- 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---~~~--~~~~~~~~i~~~l~~lh~~- 287 (487)
+....+..++||||++|++|.++...... ..+ ....+..++..++.|||+.
T Consensus 95 -----------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 151 (326)
T 3uim_A 95 -----------------------FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 151 (326)
T ss_dssp -----------------------EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred -----------------------EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 22334667899999999999887543211 133 3345567788899999999
Q ss_pred --CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 288 --GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 288 --givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
|++|+||||+|||++.+|.++|+|||++..+.............+..+..||. ...+..++++|+||+|+.++
T Consensus 152 ~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~~~~~Di~slG~il~ 226 (326)
T 3uim_A 152 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY-----LSTGKSSEKTDVFGYGVMLL 226 (326)
T ss_dssp SSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHH-----HHHSEECHHHHHHHHHHHHH
T ss_pred CCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHH-----hccCCCCccccchhHHHHHH
Confidence 99999999999999999999999999998654321100000001223344443 33444577899999999999
Q ss_pred HHHHHh
Q 011399 366 NFFDDA 371 (487)
Q Consensus 366 ~~~~~~ 371 (487)
+++++.
T Consensus 227 ~l~~g~ 232 (326)
T 3uim_A 227 ELITGQ 232 (326)
T ss_dssp HHHHCC
T ss_pred HHHhCC
Confidence 999843
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-23 Score=199.38 Aligned_cols=195 Identities=10% Similarity=0.031 Sum_probs=121.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++ +|+.||||+.+......- ..+.+......+....|+|++++++
T Consensus 16 ~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~-------------- 74 (271)
T 3kmu_A 16 TKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTR-----KSRDFNEECPRLRIFSHPNVLPVLG-------------- 74 (271)
T ss_dssp EEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHH-----HHHHHHHHGGGGCCCSCTTEECEEE--------------
T ss_pred HHhcCCCcceEEEEEE--CCeeEEEEEecccccCHH-----HHHHHHHHHHHHHhcCCCchhheEE--------------
Confidence 7899999999999998 499999999975421110 0011111111111222332222211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC-CCCceEEEeecCCCCcCcHHHHHhc-CCCH--HHHHHHHHHHHHHHHHHCC-
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQ-GLKV--LDLVNTGIQCSLRQLLEYG- 288 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~--~~~~~~~i~~~l~~lh~~g- 288 (487)
++.+. ....++||||++|++|.++...... ..+. ...+..++..++.|||+.|
T Consensus 75 ----------------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~ 132 (271)
T 3kmu_A 75 ----------------------ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEP 132 (271)
T ss_dssp ----------------------EECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred ----------------------EEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 11111 2456899999999999887543221 2343 3445677888999999999
Q ss_pred -ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 289 -YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 289 -ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
++|+|+||+||+++.+|.+++.|||+......... ..+..+..||.+.... .+..+.++|+||+|+.++++
T Consensus 133 ~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~------~~t~~y~aPE~~~~~~--~~~~~~~~Di~slG~il~el 204 (271)
T 3kmu_A 133 LIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR------MYAPAWVAPEALQKKP--EDTNRRSADMWSFAVLLWEL 204 (271)
T ss_dssp CCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTC------BSCGGGSCHHHHHSCG--GGSCHHHHHHHHHHHHHHHH
T ss_pred ceecCCCccceEEEcCCcceeEEeccceeeecccCc------cCCccccChhhhccCC--CCCCCchhhHHHHHHHHHHH
Confidence 99999999999999999999998887765433211 1122334444432110 11112258999999999999
Q ss_pred HHHhccCCCCcCcH
Q 011399 368 FDDALNSSVSELNF 381 (487)
Q Consensus 368 ~~~~~~~~~~~~~~ 381 (487)
+++ ..|+...+.
T Consensus 205 ~~g--~~p~~~~~~ 216 (271)
T 3kmu_A 205 VTR--EVPFADLSN 216 (271)
T ss_dssp HHC--SCTTTTSCH
T ss_pred HhC--CCCccccCh
Confidence 983 345544443
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-24 Score=209.65 Aligned_cols=191 Identities=13% Similarity=0.143 Sum_probs=113.7
Q ss_pred cccccccccEEEEEEEcc---CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKY---SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~---~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|++.. +++.||||+.+...... ...+ .+......+....|++++.+++
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~---~~~~e~~~l~~l~h~~iv~~~~----------- 103 (313)
T 3brb_A 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ--REIE---EFLSEAACMKDFSHPNVIRLLG----------- 103 (313)
T ss_dssp EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCH--HHHH---HHHHHHHHHHTCCCTTBCCCCE-----------
T ss_pred cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccch--hHHH---HHHHHHHHHhcCCCCCeeeeeE-----------
Confidence 679999999999998864 45689999987442111 0000 0111111111112333322221
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCC----CCceEEEeecCCCCcCcHHHHHh-----cCCCH--HHHHHHHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYT----SGKVLTMEWVEGVKLNEQVAIES-----QGLKV--LDLVNTGIQC 279 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~----~~~~LvmE~~~G~~L~~~~~~~~-----~~~~~--~~~~~~~i~~ 279 (487)
++.+.. ...++||||++|++|.++..... ...+. ...+..++..
T Consensus 104 -------------------------~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~ 158 (313)
T 3brb_A 104 -------------------------VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158 (313)
T ss_dssp -------------------------EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHH
T ss_pred -------------------------EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHH
Confidence 111111 23489999999999988754321 12333 3445577888
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
+|.|||+.|++|+|+||+||+++.+|.++|+|||++..+........ .......+..++++....+..++++|+||
T Consensus 159 aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 234 (313)
T 3brb_A 159 GMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQ----GRIAKMPVKWIAIESLADRVYTSKSDVWA 234 (313)
T ss_dssp HHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC--------------------CCGGGSCHHHHHSSCCCHHHHHHH
T ss_pred HHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCc----ccccCCCccccCchhhcCCCccchhhhHH
Confidence 99999999999999999999999999999999999987754321110 11112223333444444555677899999
Q ss_pred HHHHHHHHHH
Q 011399 360 IVPALRNFFD 369 (487)
Q Consensus 360 l~~~l~~~~~ 369 (487)
+|+.++++++
T Consensus 235 lG~il~el~~ 244 (313)
T 3brb_A 235 FGVTMWEIAT 244 (313)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999997
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-23 Score=209.72 Aligned_cols=189 Identities=15% Similarity=0.120 Sum_probs=122.7
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|++. .+++.||||+.+....... .+.
T Consensus 51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~~---- 94 (344)
T 1rjb_A 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE--------------------------------REA---- 94 (344)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------------------------------------CHH----
T ss_pred eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHH--------------------------------HHH----
Confidence 68999999999999973 3567999999975421110 011
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC----------------------
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG---------------------- 266 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~---------------------- 266 (487)
+.+|...+.++ ..++++.-..-+....+..++||||++|++|.++.......
T Consensus 95 --~~~E~~~l~~l----~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (344)
T 1rjb_A 95 --LMSELKMMTQL----GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168 (344)
T ss_dssp --HHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------
T ss_pred --HHHHHHHHHhh----cCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhccccccccccc
Confidence 22233333332 22333222222233456789999999999998875432211
Q ss_pred CCH--HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHH
Q 011399 267 LKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMAR 343 (487)
Q Consensus 267 ~~~--~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 343 (487)
.+. ...+..++..+|.|||+.|++|+||||+||+++.+|.++|+|||++..+.........+ ...+..+..||.
T Consensus 169 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~--- 245 (344)
T 1rjb_A 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPES--- 245 (344)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHH---
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHH---
Confidence 222 33455778889999999999999999999999999999999999998764331100000 000112334443
Q ss_pred HHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 344 DYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 344 ~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
...+..++++|+||+|+.++++++
T Consensus 246 --~~~~~~~~~~Di~slG~il~el~t 269 (344)
T 1rjb_A 246 --LFEGIYTIKSDVWSYGILLWEIFS 269 (344)
T ss_dssp --HHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred --hccCCCChhHhHHHHHHHHHHHHc
Confidence 334556788999999999999986
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-23 Score=209.77 Aligned_cols=123 Identities=15% Similarity=0.069 Sum_probs=84.8
Q ss_pred CCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCC
Q 011399 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (487)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~ 319 (487)
...+++|||++|++|.++........+.. ..+..++..+|.|||+.|++||||||+|||++.+|.++|+|||++..+.
T Consensus 89 ~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 89 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 45789999999999988755443344443 3455778889999999999999999999999999999999999998875
Q ss_pred HHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 320 EEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 320 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
...... ..+...+..+..||.+ .-+..++++|+||+|+.++++++
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~-----~~~~~~~~~Di~slG~il~ell~ 214 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMT 214 (327)
T ss_dssp -----------CCCGGGSCHHHH-----HHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CccccccccCCCccccccCHHHH-----cCCCCChHHHHHHHHHHHHHHHH
Confidence 443211 1111111224444443 34455788999999999999997
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-23 Score=201.43 Aligned_cols=192 Identities=15% Similarity=0.182 Sum_probs=121.8
Q ss_pred cccccccccEEEEEEEccC---CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYS---GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~---g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|++..+ +..||||+.+....... . +.
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~---~-----------------------------~~------ 72 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE---V-----------------------------SQ------ 72 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHH---H-----------------------------HH------
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHH---H-----------------------------HH------
Confidence 7899999999999997533 34689999864321110 0 01
Q ss_pred HHHHHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
+.+|+..+.++ . +++ +.+-.++.+..+..++||||++|++|.++........+... .+..++..++.+||+.
T Consensus 73 ~~~E~~~l~~l----~-h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~ 147 (298)
T 3f66_A 73 FLTEGIIMKDF----S-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147 (298)
T ss_dssp HHHHHHHHHTC----C-CTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC----C-CCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22222222222 1 222 11222223334567899999999999888543333344443 3446788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.+|.++|+|||++..+........... ....+.+..++++....+..+++.|+||+|+.++++
T Consensus 148 ~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 225 (298)
T 3f66_A 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK--TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 225 (298)
T ss_dssp TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-------CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred CccCCCCchheEEECCCCCEEECcccccccccccchhccccc--cCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987754321100000 111112223333333445567789999999999999
Q ss_pred HHH
Q 011399 368 FDD 370 (487)
Q Consensus 368 ~~~ 370 (487)
+++
T Consensus 226 ~~~ 228 (298)
T 3f66_A 226 MTR 228 (298)
T ss_dssp HTT
T ss_pred HhC
Confidence 973
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-24 Score=216.52 Aligned_cols=189 Identities=16% Similarity=0.113 Sum_probs=123.6
Q ss_pred cccccccccEEEEEEEccCCc-----EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ-----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~-----~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|++..+|+ .||||+.+....... .+.
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~~---- 95 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--------------------------------KEA---- 95 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHH--------------------------------HHH----
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHH--------------------------------HHH----
Confidence 679999999999999876554 899999875422110 011
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-------------cCCCH--HHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-------------QGLKV--LDLV 273 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-------------~~~~~--~~~~ 273 (487)
+.+|...+.++ ..++++.-..-+....+..++||||++|++|.++..... ...+. ...+
T Consensus 96 --~~~E~~~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (333)
T 2i1m_A 96 --LMSELKIMSHL----GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169 (333)
T ss_dssp --HHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHH
T ss_pred --HHHHHHHHHhh----cCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHH
Confidence 22233333322 123332211112334567899999999999988755332 12233 3344
Q ss_pred HHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 274 NTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 274 ~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
..++..+|.|||+.|++|+|+||+||+++.+|.++|+|||++..+.........+ ...+..+..||.+ .-+..+
T Consensus 170 ~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~ 244 (333)
T 2i1m_A 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI-----FDCVYT 244 (333)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH-----HHCCCC
T ss_pred HHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHh-----ccCCCC
Confidence 5778889999999999999999999999999999999999998654321100000 0001123444433 344567
Q ss_pred CCCCcchHHHHHHHHHH
Q 011399 353 PDVDVTPIVPALRNFFD 369 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~ 369 (487)
+++|+||+|+.++++++
T Consensus 245 ~~~Di~slG~il~el~t 261 (333)
T 2i1m_A 245 VQSDVWSYGILLWEIFS 261 (333)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHc
Confidence 88999999999999986
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-24 Score=238.18 Aligned_cols=182 Identities=18% Similarity=0.148 Sum_probs=112.7
Q ss_pred cccccccccEEEEEEEcc-CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKY-SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||+|+||.||+|+++. +|+.||||++.+...... ...+......+....|+|++.+++
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~------~~~~~~E~~~l~~l~hp~iv~~~~------------- 146 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEA------QAMAMAERQFLAEVVHPSIVQIFN------------- 146 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHH------HHHHHHHHGGGGGCCCTTBCCEEE-------------
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHH------HHHHHHHHHHHHhcCCCCcCeEee-------------
Confidence 689999999999999975 799999999864321110 001111111111222333332221
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCC----ceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCC
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSG----KVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~----~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~g 288 (487)
++...... .+|||||++|++|.+.... .........+..++..+|.|+|++|
T Consensus 147 -----------------------~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~g 202 (681)
T 2pzi_A 147 -----------------------FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ-KLPVAEAIAYLLEILPALSYLHSIG 202 (681)
T ss_dssp -----------------------EEEEECTTSCEEEEEEEECCCCEECC----C-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------eEeecCCCCCceeEEEEEeCCCCcHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11111111 4899999999999876322 2222233445678888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
|+||||||+|||++.+ .+||+|||+++.+.... ...+ +..+..||. ...+. +.++|+||+|+.+++++
T Consensus 203 iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~--~~~g---t~~y~aPE~-----~~~~~-~~~sDi~slG~~l~~l~ 270 (681)
T 2pzi_A 203 LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG--YLYG---TPGFQAPEI-----VRTGP-TVATDIYTVGRTLAALT 270 (681)
T ss_dssp EECCCCSGGGEEECSS-CEEECCCTTCEETTCCS--CCCC---CTTTSCTTH-----HHHCS-CHHHHHHHHHHHHHHHH
T ss_pred CeecccChHHeEEeCC-cEEEEecccchhcccCC--ccCC---CccccCHHH-----HcCCC-CCceehhhhHHHHHHHH
Confidence 9999999999999874 89999999998765431 0111 122333333 22333 56678888888888877
Q ss_pred HH
Q 011399 369 DD 370 (487)
Q Consensus 369 ~~ 370 (487)
.+
T Consensus 271 ~g 272 (681)
T 2pzi_A 271 LD 272 (681)
T ss_dssp SC
T ss_pred hC
Confidence 53
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-24 Score=210.50 Aligned_cols=234 Identities=15% Similarity=0.120 Sum_probs=139.8
Q ss_pred cccccccccEEEEEEE--ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQL--KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~--~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|+||.||+|.+ ..+++.||||+.+...... . ..+. +
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-----~--------------------------~~~~------~ 65 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-----A--------------------------LKDE------L 65 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----C-----H--------------------------HHHH------H
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCH-----H--------------------------HHHH------H
Confidence 4899999999999954 4568999999987542110 0 0011 2
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
.+|.+.+.++ .+++ +++++.. .....++||||++|++|.++.... ...+. ...+..++..++.+||+.|
T Consensus 66 ~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 137 (291)
T 1xbb_A 66 LAEANVMQQL-----DNPY--IVRMIGICEAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN 137 (291)
T ss_dssp HHHHHHHHTC-----CCTT--BCCEEEEEESSSEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC-----CCCC--EEEEEEEECCCCcEEEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2222222222 1222 2222221 235578999999999998875432 22333 3445677888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
++|+|+||+||+++.+|.++|+|||++..+....... .........+..||.+ ..+..++++|+||+|+.+++
T Consensus 138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~ 212 (291)
T 1xbb_A 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWE 212 (291)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH-----HHCEEEHHHHHHHHHHHHHH
T ss_pred eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHh-----ccCCCChhhhHHHHHHHHHH
Confidence 9999999999999999999999999998764331100 0000001223445543 23334667899999999999
Q ss_pred HHH-HhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCCh
Q 011399 367 FFD-DALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (487)
Q Consensus 367 ~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (487)
+++ +. .++...+...+...+.... ...+...|+.+..+++.+ ...||.-++
T Consensus 213 l~~~g~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~-------l~~dp~~Rp 265 (291)
T 1xbb_A 213 AFSYGQ--KPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC-------WTYDVENRP 265 (291)
T ss_dssp HHTTTC--CSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH-------TCSSTTTSC
T ss_pred HHhcCC--CCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH-------cCCChhhCc
Confidence 997 43 3555555444333322111 112334556655555544 445565543
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-23 Score=198.99 Aligned_cols=179 Identities=17% Similarity=0.211 Sum_probs=115.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|++|.||+|+. +|+.||||+.+..... +. +.+
T Consensus 27 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~-----------------------------------~~------~~~ 63 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATA-----------------------------------QA------FLA 63 (278)
T ss_dssp EEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------------------------------------HH------HHH
T ss_pred eEEecCCCceEEEEEE--cCCEEEEEEecchhHH-----------------------------------HH------HHH
Confidence 7899999999999987 5899999998754211 00 111
Q ss_pred HHHHHHHHHHHhCCCCC-eEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++ . +++ +.+-..+.+.....++||||++|++|.++..... ........+..++..++.++|+.|+
T Consensus 64 E~~~l~~l----~-h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 138 (278)
T 1byg_A 64 EASVMTQL----R-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 138 (278)
T ss_dssp THHHHTTC----C-CTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhC----C-CCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 22222211 1 121 1122222233346799999999999988765432 2223334556788889999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|+|+||+||+++.+|.++|+|||++.......... .....+..||.+ ..+..++++|+||+|+.++++++
T Consensus 139 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~----~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~t 209 (278)
T 1byg_A 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG----KLPVKWTAPEAL-----REKKFSTKSDVWSFGILLWEIYS 209 (278)
T ss_dssp CCSCCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHH-----HHCCCCHHHHHHHHHHHHHHHHT
T ss_pred cccCCCcceEEEeCCCcEEEeeccccccccccccCC----CccccccCHHHh-----CCCCCCchhcHHHHHHHHHHHHh
Confidence 999999999999999999999999998665432110 111223444443 34455778999999999999986
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.7e-24 Score=211.37 Aligned_cols=186 Identities=18% Similarity=0.186 Sum_probs=124.0
Q ss_pred cccccccccEEEEEEE----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQL----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~----~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|++ ..+|+.||||+++....... +.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------------------~~----- 70 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---------------------------------RD----- 70 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHH---------------------------------HH-----
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHH---------------------------------HH-----
Confidence 7899999999999994 55899999999975532211 01
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceee---e-cCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIF---W-DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQ 283 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~---~-~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~ 283 (487)
+.+|+..+.++ .++. ++.++ . +.....++||||++|++|.++........+.. ..+..++..+|.|
T Consensus 71 -~~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~ 142 (327)
T 3lxl_A 71 -FQREIQILKAL-----HSDF--IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142 (327)
T ss_dssp -HHHHHHHHHTC-----CCTT--BCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhc-----CCCc--eeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 22233322222 1222 22221 1 22345789999999999998865544444443 3445788889999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH--HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI--IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
||+.|++|+|+||+||+++.+|.++|+|||++..+........ ........+..||.+ ..+..++++|+||+|
T Consensus 143 lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG 217 (327)
T 3lxl_A 143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL-----SDNIFSRQSDVWSFG 217 (327)
T ss_dssp HHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHH-----HHCEEEHHHHHHHHH
T ss_pred HHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHh-----ccCCCChHHhHHHHH
Confidence 9999999999999999999999999999999986643211000 000001123444443 333446788999999
Q ss_pred HHHHHHHHH
Q 011399 362 PALRNFFDD 370 (487)
Q Consensus 362 ~~l~~~~~~ 370 (487)
+.+++++++
T Consensus 218 ~il~~ll~g 226 (327)
T 3lxl_A 218 VVLYELFTY 226 (327)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhC
Confidence 999999974
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-23 Score=210.85 Aligned_cols=202 Identities=16% Similarity=0.120 Sum_probs=120.6
Q ss_pred cccccccccEEEEEEEcc---CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKY---SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~---~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|++.. ++..||||+....... ...+...++.+.. .+
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~e~~~~~~~~~---------------------------~~ 94 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP-LFSELKFYQRVAK---------------------------KD 94 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CH-HHHHHHHHHHHCC---------------------------HH
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcc-hHHHHHHHHHHhh---------------------------hH
Confidence 689999999999999986 7889999998765221 1222222222110 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecC------CCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDY------TSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~ 283 (487)
+..|...+.. + .++ .+++++... ....++||||+ |++|.++..... ........+..++..+|.|
T Consensus 95 ~~~e~~~~~~----l-~h~--ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~ 166 (345)
T 2v62_A 95 CIKKWIERKQ----L-DYL--GIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEY 166 (345)
T ss_dssp HHHHHHHHHT----C-SCC--CCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcc----c-ccc--CcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 1222222111 1 122 233443321 35579999999 989987744322 2223344556788889999
Q ss_pred HHHCCccccCCCCCCeEEcCCC--cEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 284 LLEYGYFHADPHPGNLLATPEG--KLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g--~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
||+.|++|||+||+|||++.++ .++|+|||+++.+....... ..........+.+..++++...-+..++++|+||+
T Consensus 167 LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 246 (345)
T 2v62_A 167 IHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEIL 246 (345)
T ss_dssp HHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHH
T ss_pred HHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHH
Confidence 9999999999999999999887 99999999998764431100 00000000112223333444444556788999999
Q ss_pred HHHHHHHHHHh
Q 011399 361 VPALRNFFDDA 371 (487)
Q Consensus 361 ~~~l~~~~~~~ 371 (487)
|+.+++++++.
T Consensus 247 G~il~ell~g~ 257 (345)
T 2v62_A 247 GYCMLRWLCGK 257 (345)
T ss_dssp HHHHHHHHHSS
T ss_pred HHHHHHHHhCC
Confidence 99999999843
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-23 Score=207.25 Aligned_cols=188 Identities=21% Similarity=0.220 Sum_probs=115.4
Q ss_pred cccccccccEEEEEE-----EccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQ-----LKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~-----~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|+ ...+|+.||||+++....... +
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------------~ 77 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD--------------------------------------E 77 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHH--------------------------------------H
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhh--------------------------------------H
Confidence 679999999999999 445788999999864321110 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh------cCCCH--HHHHHHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES------QGLKV--LDLVNTGIQCS 280 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~------~~~~~--~~~~~~~i~~~ 280 (487)
.++.+|+..+.++ .++++.-..-+.......++||||++|++|.++..... ...+. ...+..++..+
T Consensus 78 ~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a 152 (327)
T 2yfx_A 78 LDFLMEALIISKF-----NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152 (327)
T ss_dssp HHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhC-----CCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHH
Confidence 1122333333322 12222111112233456799999999999998855432 12333 33455778889
Q ss_pred HHHHHHCCccccCCCCCCeEEcCC---CcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 281 LRQLLEYGYFHADPHPGNLLATPE---GKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~~~---g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
+.|||+.|++|+|+||+||+++.+ +.++|+|||++..+.........+ ......+..||. ...+..++++|
T Consensus 153 l~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~D 227 (327)
T 2yfx_A 153 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA-----FMEGIFTSKTD 227 (327)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHH-----HHHCCCCHHHH
T ss_pred HHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhH-----hcCCCCCchhh
Confidence 999999999999999999999954 459999999876432111000000 001122344443 33455678899
Q ss_pred cchHHHHHHHHHH
Q 011399 357 VTPIVPALRNFFD 369 (487)
Q Consensus 357 i~sl~~~l~~~~~ 369 (487)
+||+|+.++++++
T Consensus 228 i~slG~il~ellt 240 (327)
T 2yfx_A 228 TWSFGVLLWEIFS 240 (327)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999986
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-23 Score=205.61 Aligned_cols=197 Identities=14% Similarity=0.156 Sum_probs=124.5
Q ss_pred cccccccccEEEEEEEccCCcEE--EEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIV--AVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~V--AVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|+||.||+|+++.+|..+ |||..+....... . .. +
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~---~-----------------------------~~------~ 72 (327)
T 1fvr_A 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD---H-----------------------------RD------F 72 (327)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------------------------------------CH------H
T ss_pred eeeecCCCceEEEEEEccCCcccceeeeeeccccchHH---H-----------------------------HH------H
Confidence 68999999999999998888865 9998864321110 0 00 1
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHHh---------------cCCCH--HHH
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLKV--LDL 272 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~--~~~ 272 (487)
.+|...+.++ ..+++ +++++ .......++||||++|++|.++..... ...+. ...
T Consensus 73 ~~E~~~l~~l----~~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (327)
T 1fvr_A 73 AGELEVLCKL----GHHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146 (327)
T ss_dssp HHHHHHHTTC----CCCTT--BCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred HHHHHHHHhc----cCCCc--hhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHH
Confidence 1222222111 12232 22222 233456789999999999988754221 12333 344
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 011399 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (487)
Q Consensus 273 ~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (487)
+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++............ .....+..||.+ ..+..+
T Consensus 147 i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~--~~~~~y~aPE~~-----~~~~~~ 219 (327)
T 1fvr_A 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG--RLPVRWMAIESL-----NYSVYT 219 (327)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC------CCTTTCCHHHH-----HHCEEC
T ss_pred HHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCC--CCCccccChhhh-----ccccCC
Confidence 5677888999999999999999999999999999999999998754332111000 011223445543 334447
Q ss_pred CCCCcchHHHHHHHHHH-HhccCCCCcCcHHH
Q 011399 353 PDVDVTPIVPALRNFFD-DALNSSVSELNFKT 383 (487)
Q Consensus 353 ~~~Di~sl~~~l~~~~~-~~~~~~~~~~~~~~ 383 (487)
+++|+||+|+.++++++ +. .|+...+...
T Consensus 220 ~~~Di~slG~il~ellt~g~--~pf~~~~~~~ 249 (327)
T 1fvr_A 220 TNSDVWSYGVLLWEIVSLGG--TPYCGMTCAE 249 (327)
T ss_dssp HHHHHHHHHHHHHHHHTTSC--CTTTTCCHHH
T ss_pred chhcchHHHHHHHHHHcCCC--CCCCCCcHHH
Confidence 78899999999999986 32 3444444333
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-24 Score=210.53 Aligned_cols=186 Identities=17% Similarity=0.189 Sum_probs=120.3
Q ss_pred cccccccccEEEEEEEc--cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLK--YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|+||+||+|+++ .+|+.||||+.+...... +. +. +
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~---~~-----------------------------~~------~ 57 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---DT-----------------------------EE------M 57 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---HH-----------------------------HH------H
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchh---HH-----------------------------HH------H
Confidence 47999999999999864 368899999998642211 00 01 1
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
.+|+..+.++ .+++ +++++.. .....++||||++|++|.++........+. ...+..++..++.+||+.|
T Consensus 58 ~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 130 (287)
T 1u59_A 58 MREAQIMHQL-----DNPY--IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130 (287)
T ss_dssp HHHHHHHHHC-----CCTT--BCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC-----CCCC--EeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 2222222222 1222 2222211 235578999999999998875322233443 3445677888999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
++|+|+||+||+++.+|.++|+|||++..+....... .........+..||.+ ..+..++++|+||+|+.+++
T Consensus 131 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~e 205 (287)
T 1u59_A 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI-----NFRKFSSRSDVWSYGVTMWE 205 (287)
T ss_dssp EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHH-----HHCEECHHHHHHHHHHHHHH
T ss_pred EeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHh-----ccCCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999998764321000 0000001223344443 33445778899999999999
Q ss_pred HHH
Q 011399 367 FFD 369 (487)
Q Consensus 367 ~~~ 369 (487)
+++
T Consensus 206 llt 208 (287)
T 1u59_A 206 ALS 208 (287)
T ss_dssp HHT
T ss_pred HHc
Confidence 986
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.87 E-value=7.5e-24 Score=206.37 Aligned_cols=188 Identities=18% Similarity=0.204 Sum_probs=113.7
Q ss_pred cccccccccEEEEEEEcc-CCc--EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKY-SGQ--IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-~g~--~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|++.. +|+ .||||+.++.....- +..+.
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------~~~~~------ 67 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP------------------------------EAMDD------ 67 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------C------------------------------HHHHH------
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCH------------------------------HHHHH------
Confidence 679999999999998642 333 699999875421110 00011
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~ 287 (487)
+.+|.+.+.++ .+++ +++++.. .....++||||++|++|.+.........+. ...+..++..++.++|+.
T Consensus 68 ~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 140 (291)
T 1u46_A 68 FIREVNAMHSL-----DHRN--LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 140 (291)
T ss_dssp HHHHHHHHHHC-----CCTT--BCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-----CCCC--cccEEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 22333333332 1222 2222221 234578999999999998876544333443 344567888899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
|++|+|+||+||+++.+|.++|+|||++..+....... ......+..+..||.+ ..+..+++.|+||+|+.++
T Consensus 141 ~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~ 215 (291)
T 1u46_A 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL-----KTRTFSHASDTWMFGVTLW 215 (291)
T ss_dssp TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHH-----HHCEEEHHHHHHHHHHHHH
T ss_pred CcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhh-----cCCCCCchhhHHHHHHHHH
Confidence 99999999999999999999999999998764331100 0000111234455544 2333466789999999999
Q ss_pred HHHH
Q 011399 366 NFFD 369 (487)
Q Consensus 366 ~~~~ 369 (487)
++++
T Consensus 216 ~l~~ 219 (291)
T 1u46_A 216 EMFT 219 (291)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9987
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.87 E-value=5.9e-23 Score=204.69 Aligned_cols=205 Identities=16% Similarity=0.168 Sum_probs=128.3
Q ss_pred cccccccccEEEEEEEc-------cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-------YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-------~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
+.||+|+||+||+|++. .+++.||||+.+...... +. ..
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~-----------------------------~~-- 86 (334)
T 2pvf_A 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DL-----------------------------SD-- 86 (334)
T ss_dssp EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHH---HH-----------------------------HH--
T ss_pred eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHH---HH-----------------------------HH--
Confidence 78999999999999975 367899999987542211 00 01
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---------------CCCH--
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------GLKV-- 269 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~-- 269 (487)
+.+|...+.++ ..++++.-..-+.......++||||++|++|.++...... ..+.
T Consensus 87 ----~~~E~~~l~~l----~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
T 2pvf_A 87 ----LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158 (334)
T ss_dssp ----HHHHHHHHHHH----CCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHH
T ss_pred ----HHHHHHHHHHh----hcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHH
Confidence 22223222222 1233321111122334567999999999999887543211 1333
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHc
Q 011399 270 LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYAL 348 (487)
Q Consensus 270 ~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 348 (487)
...+..++..+|.|||+.|++|+|+||+||+++.+|.++|+|||++..+....... .........+..||.+ ..
T Consensus 159 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~ 233 (334)
T 2pvf_A 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-----FD 233 (334)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH-----HH
T ss_pred HHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHh-----cC
Confidence 33445778889999999999999999999999999999999999998664321000 0000001123444443 33
Q ss_pred CCCCCCCCcchHHHHHHHHHH-HhccCCCCcCcHHHHHHH
Q 011399 349 DFLSPDVDVTPIVPALRNFFD-DALNSSVSELNFKTIVDG 387 (487)
Q Consensus 349 g~~~~~~Di~sl~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 387 (487)
+..++++|+||+|+.++++++ +. .++...+...+...
T Consensus 234 ~~~~~~~Di~slG~il~ellt~g~--~p~~~~~~~~~~~~ 271 (334)
T 2pvf_A 234 RVYTHQSDVWSFGVLMWEIFTLGG--SPYPGIPVEELFKL 271 (334)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSC--CSSTTCCHHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHHHhCCC--CCcCcCCHHHHHHH
Confidence 445778999999999999997 32 35555555544433
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-23 Score=204.98 Aligned_cols=189 Identities=15% Similarity=0.136 Sum_probs=123.0
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|++. .+|+.||||+.+....... ..
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~----- 75 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--------------------------------HR----- 75 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH--------------------------------HH-----
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHH--------------------------------HH-----
Confidence 78999999999999853 4679999999975422110 00
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHhcC---------------CC--HH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG---------------LK--VL 270 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~---------------~~--~~ 270 (487)
.+.+|...+.++ ..++++ .+-..+.......++||||++|++|.++....... .+ ..
T Consensus 76 -~~~~E~~~l~~l----~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (316)
T 2xir_A 76 -ALMSELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150 (316)
T ss_dssp -HHHHHHHHHHHH----CCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHH
T ss_pred -HHHHHHHHHHhc----ccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHH
Confidence 122233333332 122222 11112222234579999999999998875432210 22 33
Q ss_pred HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcC
Q 011399 271 DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALD 349 (487)
Q Consensus 271 ~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g 349 (487)
..+..++..++.|+|+.|++|+|+||+||+++.+|.++|+|||++..+........ .....+..+..||.+ ..+
T Consensus 151 ~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-----~~~ 225 (316)
T 2xir_A 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-----FDR 225 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH-----HHC
T ss_pred HHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhh-----ccc
Confidence 44557888899999999999999999999999999999999999987643211000 000001223444443 344
Q ss_pred CCCCCCCcchHHHHHHHHHH
Q 011399 350 FLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 350 ~~~~~~Di~sl~~~l~~~~~ 369 (487)
..+.++|+||+|+.++++++
T Consensus 226 ~~~~~~Di~slG~il~~l~t 245 (316)
T 2xir_A 226 VYTIQSDVWSFGVLLWEIFS 245 (316)
T ss_dssp CCCHHHHHHHHHHHHHHHHT
T ss_pred cccchhHHHHHHHHHHHHHh
Confidence 55778999999999999996
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-22 Score=198.68 Aligned_cols=192 Identities=15% Similarity=0.160 Sum_probs=120.7
Q ss_pred cccccccccEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|++..+++ .||+|+........ +. +.
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~---~~-----------------------------~~------ 68 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ---QV-----------------------------EA------ 68 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHH---HH-----------------------------HH------
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHH---HH-----------------------------HH------
Confidence 679999999999999764444 89999986432211 00 00
Q ss_pred HHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
+.+|...+.++ .++++ .+-.++.+.....+++|||+.|++|.++........+... .+..++..++.|||+.
T Consensus 69 ~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 143 (298)
T 3pls_A 69 FLREGLLMRGL-----NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143 (298)
T ss_dssp HHHHHHHHHTC-----CCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-----CCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 12222222221 12221 1111222222334899999999999887543333344433 4456788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|+|+||+||+++.+|.++|+|||++..+........... ......+..++++....+..++++|+||+|+.++++
T Consensus 144 ~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 221 (298)
T 3pls_A 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQH--RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWEL 221 (298)
T ss_dssp TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCS--SCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccC--cCCCCCccccChhhhccCCCChhhchhhHHHHHHHH
Confidence 999999999999999999999999999987654321000000 000111222333333344457789999999999999
Q ss_pred HHH
Q 011399 368 FDD 370 (487)
Q Consensus 368 ~~~ 370 (487)
+++
T Consensus 222 ~~g 224 (298)
T 3pls_A 222 LTR 224 (298)
T ss_dssp HHT
T ss_pred hhC
Confidence 984
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-23 Score=205.50 Aligned_cols=189 Identities=21% Similarity=0.174 Sum_probs=120.4
Q ss_pred cccccccccEEEEEEE----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQL----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~----~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|.. ..+|+.||||+++....... .+.
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------~~~----- 79 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQH--------------------------------RSG----- 79 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHH--------------------------------HHH-----
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHH--------------------------------HHH-----
Confidence 7899999999988864 34789999999975422110 011
Q ss_pred cHHHHHHHHHHHHHHhCCCCC-eEeceeeecC-CCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKED-VLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~-v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
+.+|...+.++. +++ +.+-.++.+. ....++||||++|++|.++......+......+..++..++.+||+.
T Consensus 80 -~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~ 153 (318)
T 3lxp_A 80 -WKQEIDILRTLY-----HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 153 (318)
T ss_dssp -HHHHHHHHHHCC-----CTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHhCC-----CcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 222332222221 222 1111222222 24568999999999998874332222333344557788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
|++|+|+||+||+++.+|.++|+|||++..+...... ..........+..||.+ ..+..++++|+||+|+.++
T Consensus 154 ~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~ 228 (318)
T 3lxp_A 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL-----KEYKFYYASDVWSFGVTLY 228 (318)
T ss_dssp TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHH-----HHCEEEHHHHHHHHHHHHH
T ss_pred CccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHh-----cCCCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999876543110 00000011223445543 2333456789999999999
Q ss_pred HHHHH
Q 011399 366 NFFDD 370 (487)
Q Consensus 366 ~~~~~ 370 (487)
+++++
T Consensus 229 ~ll~g 233 (318)
T 3lxp_A 229 ELLTH 233 (318)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 99974
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.8e-24 Score=212.78 Aligned_cols=190 Identities=14% Similarity=0.103 Sum_probs=119.5
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|... +.||+|+||.||+|++ +|+.||||++++........+.++++.. ...|+|++.++
T Consensus 44 y~~~--~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~--------~l~h~ni~~~~--------- 102 (342)
T 1b6c_B 44 IVLQ--ESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTV--------MLRHENILGFI--------- 102 (342)
T ss_dssp CEEE--EEEEEETTEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHS--------CCCCTTBCCEE---------
T ss_pred EEEE--eeecCCCCcEEEEEEE--cCccEEEEEeCchhHHHHHHHHHHHHHh--------hcCCCcEEEEE---------
Confidence 4444 7899999999999997 5999999998754322211111111100 01122222211
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCC---CCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYT---SGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~---~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 284 (487)
..+.... ...++||||++|++|.++.............+..++..++.|+
T Consensus 103 ---------------------------~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~l 155 (342)
T 1b6c_B 103 ---------------------------AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 155 (342)
T ss_dssp ---------------------------EEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------eeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHH
Confidence 1111111 2578999999999999885432222233344557788899999
Q ss_pred H--------HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH---HHHHHHHHHHhcCHHHHHHHHHHcCCC--
Q 011399 285 L--------EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF---AIIGHVVHMVNRDYEAMARDYYALDFL-- 351 (487)
Q Consensus 285 h--------~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~-- 351 (487)
| +.|++|+|+||+||+++.+|.++|+|||++......... .......+..+..||.+ ..+..
T Consensus 156 H~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~ 230 (342)
T 1b6c_B 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL-----DDSINMK 230 (342)
T ss_dssp HCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHH-----TSCCCTT
T ss_pred HHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhh-----ccccccc
Confidence 9 899999999999999999999999999999765432100 00000112233444433 22211
Q ss_pred ----CCCCCcchHHHHHHHHHHH
Q 011399 352 ----SPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 352 ----~~~~Di~sl~~~l~~~~~~ 370 (487)
++++|+||+|+.+++++++
T Consensus 231 ~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 231 HFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccCCcccHHHHHHHHHHHHhc
Confidence 1468999999999999975
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-22 Score=200.56 Aligned_cols=193 Identities=17% Similarity=0.096 Sum_probs=115.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|++..+|+.||||++........ .. +.+
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---------------------------------~~------~~~ 74 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN---------------------------------RA------IIQ 74 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHH---------------------------------HH------HHH
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHH---------------------------------HH------HHH
Confidence 789999999999999988999999998864422211 01 122
Q ss_pred HHHHHHHHHHHhCCCCCeE-eceee-------ecCCCCceEEEeecCCCCcCcHHHH-H-hcCCCH--HHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVL-VPDIF-------WDYTSGKVLTMEWVEGVKLNEQVAI-E-SQGLKV--LDLVNTGIQCSL 281 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~-vP~v~-------~~~~~~~~LvmE~~~G~~L~~~~~~-~-~~~~~~--~~~~~~~i~~~l 281 (487)
|...+.++. +++++. +-..+ .......+++|||++| +|.++... . ....+. ...+..++..+|
T Consensus 75 e~~~l~~l~----~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l 149 (337)
T 3ll6_A 75 EVCFMKKLS----GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149 (337)
T ss_dssp HHHHHHHHT----TSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----cCCChhhccccccccccccccCCceEEEEEEecCC-CHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence 222222221 122211 11111 0122336899999975 67665432 1 122443 344557788899
Q ss_pred HHHHHCC--ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHH------HHHHHhcCHHHHHHHHH---HcCC
Q 011399 282 RQLLEYG--YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGH------VVHMVNRDYEAMARDYY---ALDF 350 (487)
Q Consensus 282 ~~lh~~g--ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~---~~g~ 350 (487)
.|||+.| ++|+||||.|||++.+|.++|+|||++..+........... ......+++..++++.. ..+.
T Consensus 150 ~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ 229 (337)
T 3ll6_A 150 QHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFP 229 (337)
T ss_dssp HHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSC
T ss_pred HHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCC
Confidence 9999999 99999999999999999999999999987754311110000 00011123334444444 2233
Q ss_pred CCCCCCcchHHHHHHHHHHH
Q 011399 351 LSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 351 ~~~~~Di~sl~~~l~~~~~~ 370 (487)
.++++|+||+|+.+++++++
T Consensus 230 ~~~~~Dv~slG~il~el~~g 249 (337)
T 3ll6_A 230 IGEKQDIWALGCILYLLCFR 249 (337)
T ss_dssp SSHHHHHHHHHHHHHHHHHS
T ss_pred CChHHhHHHHHHHHHHHHhC
Confidence 45678999999999999874
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.2e-24 Score=210.22 Aligned_cols=186 Identities=17% Similarity=0.210 Sum_probs=121.5
Q ss_pred cccccccccEEEEEEE----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQL----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~----~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||+||+|+. ..+|+.||||++++...... +.
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------------------~~----- 88 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---------------------------------RD----- 88 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHH---------------------------------HH-----
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHH---------------------------------HH-----
Confidence 7799999999999984 45899999999976422211 01
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeee---c-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHH
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFW---D-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQ 283 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~---~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~ 283 (487)
+.+|...+.++ .++. +++++. . .....++||||++|++|.++........+... .+..++..+|.+
T Consensus 89 -~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~ 160 (326)
T 2w1i_A 89 -FEREIEILKSL-----QHDN--IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160 (326)
T ss_dssp -HHHHHHHHHTC-----CCTT--BCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhC-----CCCC--eeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 12222222222 1222 122221 1 12356899999999999988554333345444 345678889999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
||+.|++|+|+||+||+++.+|.++|+|||++..+....... .........+..||.+. .+..++++|+||+|
T Consensus 161 LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG 235 (326)
T 2w1i_A 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT-----ESKFSVASDVWSFG 235 (326)
T ss_dssp HHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHH-----HCEEEHHHHHHHHH
T ss_pred HHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhc-----CCCCCchhhHHHHH
Confidence 999999999999999999999999999999998764321000 00000011234455432 23346778999999
Q ss_pred HHHHHHHHH
Q 011399 362 PALRNFFDD 370 (487)
Q Consensus 362 ~~l~~~~~~ 370 (487)
+.+++++++
T Consensus 236 ~il~el~tg 244 (326)
T 2w1i_A 236 VVLYELFTY 244 (326)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999999984
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=212.78 Aligned_cols=204 Identities=14% Similarity=0.167 Sum_probs=131.2
Q ss_pred cccccccccEEEEEEEccC---CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYS---GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~---g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|++..+ +..||||+.+....... .+.
T Consensus 396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~--------------------------------~~~------ 437 (656)
T 2j0j_A 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--------------------------------REK------ 437 (656)
T ss_dssp EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHH--------------------------------HHH------
T ss_pred eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHH--------------------------------HHH------
Confidence 5699999999999998643 56899999865422111 011
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
+..|+..+.++ .+++ +.+++.. ..+..++||||++|++|.++........+... .+..++..||.|||+.
T Consensus 438 ~~~E~~~l~~l-----~Hpn--Iv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 510 (656)
T 2j0j_A 438 FLQEALTMRQF-----DHPH--IVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 510 (656)
T ss_dssp HHHHHHHHHHC-----CCTT--BCCEEEEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-----CCCC--CCeEEEEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22233333222 1222 1222211 23557899999999999988654444455544 4457888899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
|++|||+||+|||++.+|.++|+|||+++.+................+..||. ...+..++++|+||+|+.++++
T Consensus 511 givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~-----~~~~~~~~~~DiwSlG~il~el 585 (656)
T 2j0j_A 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-----INFRRFTSASDVWMFGVCMWEI 585 (656)
T ss_dssp TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHH-----HHHCCCCHHHHHHHHHHHHHHH
T ss_pred CccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHH-----hcCCCCCchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999876543211111111123444554 3445567889999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGL 388 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l 388 (487)
+.. ...|+...+.......+
T Consensus 586 lt~-g~~Pf~~~~~~~~~~~i 605 (656)
T 2j0j_A 586 LMH-GVKPFQGVKNNDVIGRI 605 (656)
T ss_dssp HTT-SCCTTTTCCHHHHHHHH
T ss_pred HHc-CCCCCCCCCHHHHHHHH
Confidence 852 12355555554444333
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=7.7e-24 Score=227.36 Aligned_cols=271 Identities=15% Similarity=0.070 Sum_probs=155.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|.+..+|+.||||+.++...... . +. +.+
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~---~-----------------------------~~------~~~ 61 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN---R-----------------------------ER------WCL 61 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHH---H-----------------------------HH------HHH
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHH---H-----------------------------HH------HHH
Confidence 789999999999999988999999999875422210 0 00 222
Q ss_pred HHHHHHHHHHHhCCCCCe-Eeceeeec-----CCCCceEEEeecCCCCcCcHHHHHh----cCCCHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWD-----YTSGKVLTMEWVEGVKLNEQVAIES----QGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~-----~~~~~~LvmE~~~G~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~ 283 (487)
|+..+.++ .++++ .+-.++.. .....++||||++|++|.++..... ........+..++..++.|
T Consensus 62 Ei~iL~~L-----~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~y 136 (676)
T 3qa8_A 62 EIQIMKKL-----NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136 (676)
T ss_dssp HHHHHHHC-----CBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-----CCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 22222222 11221 11111111 1355689999999999988754321 3355666777889999999
Q ss_pred HHHCCccccCCCCCCeEEcCCCc---EEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGK---LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~---i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl 360 (487)
+|+.|++|+|+||+||+++.+|. ++|+|||++..+...... . ...+.+..++++....+..++++|+||+
T Consensus 137 LHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~--~-----~~~gt~~Y~APE~l~~~~~s~ksDIwSL 209 (676)
T 3qa8_A 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC--T-----EFVGTLQYLAPELLEQKKYTVTVDYWSF 209 (676)
T ss_dssp HHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCC--C-----CCCSCCTTCSSCSSCCSCCSTTHHHHHH
T ss_pred HHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccccc--c-----cccCCcccCChHHhccCCCCchhHHHHH
Confidence 99999999999999999997775 999999999876543110 0 0011112222222233445677899999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhcc
Q 011399 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLT 440 (487)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~ 440 (487)
|+.+++++++. .|+......... ........+... .............. ..|. ...+..
T Consensus 210 GviLyeLltG~--~Pf~~~~~~~~~------~~~i~~~~~~~~-----------~~~~~l~g~~~~~~-~lp~-p~~l~~ 268 (676)
T 3qa8_A 210 GTLAFECITGF--RPFLPNWQPVQW------HGKVREKSNEHI-----------VVYDDLTGAVKFSS-VLPT-PNHLSG 268 (676)
T ss_dssp HHHHHHHHSSC--SSCCSSCHHHHS------STTCC------C-----------CSCCCCSSSCCCCS-SSCC-SCCCCG
T ss_pred HHHHHHHHHCC--CCCCcccchhhh------hhhhhcccchhh-----------hhhhhhcccccccc-ccCC-chhhch
Confidence 99999999753 333322111000 000000000000 00000000000000 0000 001111
Q ss_pred CCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 441 DPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 441 ~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
..++.+++.+..||..||..|++..+.+.|+||..
T Consensus 269 ~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 269 ILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303 (676)
T ss_dssp GGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred hhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence 23567889999999999999999999999999853
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-22 Score=213.55 Aligned_cols=185 Identities=15% Similarity=0.124 Sum_probs=103.6
Q ss_pred cccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 011399 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (487)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea 215 (487)
.++|+.|+++.++....|+.||||++......... + .+-.+.-.+ +|.+|+
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~----------------------~-~~~~~~~~~------~~~~E~ 292 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGIL----------------------T-AEESQRNKY------ELHNEI 292 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCS----------------------C-HHHHHHHHH------HHHHHH
T ss_pred cccCCcccccccccccccceeEEEEEecccccccc----------------------h-hhhhHHHHH------HHHHHH
Confidence 56777888887777778999999999754211000 0 000000011 134444
Q ss_pred HHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 216 QNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
..+.++ . .+..||+++. +.....|||||||+|++|.+.+.. ....+..+ +..+++.||.|+|++||+|||
T Consensus 293 ~~l~~~----~--~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~-~~~l~~~~-I~~QIl~AL~ylH~~GIIHRD 364 (569)
T 4azs_A 293 KFLTQP----P--AGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA-GEEIDREK-ILGSLLRSLAALEKQGFWHDD 364 (569)
T ss_dssp HHHHSC----C--TTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHT-TCCCCHHH-HHHHHHHHHHHHHHTTCEESC
T ss_pred HHHHhc----C--CCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHh-CCCCCHHH-HHHHHHHHHHHHHHCCceecc
Confidence 443332 1 2345777665 345668999999999999998532 23355544 567999999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
|||+|||++++|++||+|||+++.+... ...+.+++..+++ ++.. .|......|+|++++.+++
T Consensus 365 IKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmA--------PE~l-~g~~~~~~d~~s~g~~~~~ 430 (569)
T 4azs_A 365 VRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFV--------NELF-AENKSWNGFWRSAPVHPFN 430 (569)
T ss_dssp CCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHH--------HHHC------------------CC
T ss_pred CchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhcc--------HHHh-CCCCCCcccccccccchhh
Confidence 9999999999999999999999987654 2334555544443 3332 2334567788888876544
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.7e-23 Score=201.63 Aligned_cols=145 Identities=14% Similarity=0.057 Sum_probs=90.9
Q ss_pred CCCceEEEeecCCCCcCcHHHHHh--cCCCHHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 241 TSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
....+++|||++|++|.++..... ........+..++..++.++|+.|++|+|+||+||+++ +|.++|+|||++...
T Consensus 101 ~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 456789999999999988754322 22334455667888999999999999999999999997 789999999998765
Q ss_pred CHHHHHHHH----HHHHHHHhcCHHHHHHHH----HHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHH
Q 011399 319 PEEARFAII----GHVVHMVNRDYEAMARDY----YALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGL 388 (487)
Q Consensus 319 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l 388 (487)
......... ....+..+..||.+.... ...+..++++|+||+|+.+++++++. .++...+.....+.+
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~--~p~~~~~~~~~~~~~ 255 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE--WPFKTQPAEAIIWQM 255 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSS--CSSSSCCHHHHHHHH
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHh
Confidence 322111000 000112233444321000 00123466789999999999999843 456665655555444
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.9e-20 Score=178.88 Aligned_cols=149 Identities=18% Similarity=0.176 Sum_probs=103.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHH-HHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVAL-IDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~-~~~~~~~l~~Eld~~ 212 (487)
+.||+|+||+||+|++ .+|+.||||+.+++....- + ....... ...+ .......+.
T Consensus 96 ~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~--~------------------~~~~~~~~~~~w--~~~~~~~~~ 152 (282)
T 1zar_A 96 KLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFK--K------------------VKEKRDYGDLHF--SVLAIRSAR 152 (282)
T ss_dssp EEEEECSSEEEEEEEE-TTTEEEEEEEECC--------C------------------CCC-------CH--HHHHHHHHH
T ss_pred CEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchh--h------------------hhhhhhhcchhh--HHHHHHHHH
Confidence 6899999999999999 5999999999975422100 0 0000000 0000 000112355
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+|...+.++. . +.+|.++.. +..++||||++|++|.++ ..+....+..++..++.++|+.|++||
T Consensus 153 ~E~~~l~~l~------~-~~v~~~~~~--~~~~lvmE~~~g~~L~~l------~~~~~~~i~~qi~~~l~~lH~~giiHr 217 (282)
T 1zar_A 153 NEFRALQKLQ------G-LAVPKVYAW--EGNAVLMELIDAKELYRV------RVENPDEVLDMILEEVAKFYHRGIVHG 217 (282)
T ss_dssp HHHHHHHHTT------T-SSSCCEEEE--ETTEEEEECCCCEEGGGC------CCSCHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHHHHhcc------C-CCcCeEEec--cceEEEEEecCCCcHHHc------chhhHHHHHHHHHHHHHHHHHCCCEeC
Confidence 6666666654 1 556666643 567999999999999873 122334577888999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
|+||+|||++ +|.++|+|||+++..+..
T Consensus 218 Dlkp~NILl~-~~~vkl~DFG~a~~~~~~ 245 (282)
T 1zar_A 218 DLSQYNVLVS-EEGIWIIDFPQSVEVGEE 245 (282)
T ss_dssp CCSTTSEEEE-TTEEEECCCTTCEETTST
T ss_pred CCCHHHEEEE-CCcEEEEECCCCeECCCC
Confidence 9999999999 999999999999877543
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6.5e-20 Score=176.22 Aligned_cols=185 Identities=19% Similarity=0.174 Sum_probs=116.7
Q ss_pred cccccccccEEEEEEEccCCcE--EEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQI--VAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~--VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
++||+|+||+||+|.+..+|+. ||||+.++....... ...+... .+.+..+. ....-..+..+
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~------------~~~~~~~-~~~~~~~~--~~~~~~~~~~~ 117 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDK------------MDEYLYG-DERFDMRR--ISPKEKVFIWT 117 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------------------GGGTTT-CTTSCC------CHHHHHHHH
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhh------------HHHhhcc-cchhhhhc--cChHHHHHHHH
Confidence 6899999999999999658999 999998765321100 0000000 00000000 00001122346
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCC-C----CcCcHHHHHhcCCCHHHHHHHHHHHHHHHHH-
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEG-V----KLNEQVAIESQGLKVLDLVNTGIQCSLRQLL- 285 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G-~----~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh- 285 (487)
.+|++++.++.+. .+.+|.++.. ...+|||||+.+ | .|.+.. ...+......+..++..++.++|
T Consensus 118 ~~E~~~l~~l~~~-----~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~--~~~~~~~~~~i~~qi~~~l~~lH~ 188 (258)
T 1zth_A 118 EKEFRNLERAKEA-----GVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELG--RELKELDVEGIFNDVVENVKRLYQ 188 (258)
T ss_dssp HHHHHHHHHHHHT-----TCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHG--GGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----CCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHh--hccChHHHHHHHHHHHHHHHHHHH
Confidence 6788888888753 3567777753 577999999942 3 333221 11112234556678889999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (487)
+.|++|||+||+|||+++ .++|+|||++...+..... ....+|.+.+...+...|+.
T Consensus 189 ~~givHrDlkp~NILl~~--~~~liDFG~a~~~~~~~~~-------~~l~rd~~~~~~~f~~~g~~ 245 (258)
T 1zth_A 189 EAELVHADLSEYNIMYID--KVYFIDMGQAVTLRHPMAE-------SYLERDVRNIIRFFSKYGVK 245 (258)
T ss_dssp TSCEECSSCSTTSEEESS--SEEECCCTTCEETTSTTHH-------HHHHHHHHHHHHHHHTTTCC
T ss_pred HCCEEeCCCCHHHEEEcC--cEEEEECcccccCCCccHH-------HHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999988 9999999999887544321 23455666666666566654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-19 Score=189.83 Aligned_cols=143 Identities=16% Similarity=0.116 Sum_probs=99.5
Q ss_pred cCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH-HHHHHHHHh
Q 011399 131 ISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE-FASRVYQEL 209 (487)
Q Consensus 131 ~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~El 209 (487)
+..+.||+|+||+||+|.. .++.+++|+..+.....- ...+. ..+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~--------------------------~~~~~~~~~------ 384 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDE--------------------------RLDENIRKS------ 384 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCH--------------------------HHHHHHHHH------
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccch--------------------------hhhhHHHHH------
Confidence 4457899999999999954 689999998764321110 00000 011
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
.+.+|.+.+.++. ++++..|..+.......+|||||++|++|.++... ...+..++..++.|||++||
T Consensus 385 ~~~~E~~il~~l~-----h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~-------~~~i~~qi~~aL~~LH~~gI 452 (540)
T 3en9_A 385 RTAREARYLALVK-----DFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED-------NLDIAYKIGEIVGKLHKNDV 452 (540)
T ss_dssp HHHHHHHHHHHGG-----GGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT-------CTHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHhcC-----CCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH-------HHHHHHHHHHHHHHHHHCcC
Confidence 2455555555552 45666667777777788999999999999876332 33566888899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
+|||+||+|||++. ++||+|||+++.++..
T Consensus 453 iHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 453 IHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp ECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred ccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 99999999999988 9999999999988764
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.75 E-value=5.3e-19 Score=177.65 Aligned_cols=156 Identities=17% Similarity=0.145 Sum_probs=105.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
.+||+|++|.||+|... +|+.||||+.+++.... +.+...........+.++..+. .+...+
T Consensus 101 ~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sf--------r~v~~~r~~~~~~~~~~~~~~~---------rl~A~k 162 (397)
T 4gyi_A 101 SRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISF--------RTVKANRDYLRNRSTGSWMYLS---------RLAAIK 162 (397)
T ss_dssp EEEEECSSEEEEEEECT-TCCEEEEEEECTTEECC--------CCCC--CEECTTSCHHHHHHHH---------HHHHHH
T ss_pred CEeeeCCceEEEEEECC-CCCEEEEEEEecccccH--------HHHHHHHHHHHhhccccHHHHH---------HHHHHH
Confidence 68999999999999987 89999999988653210 0000000000000011111111 122346
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|.+|+.++... .+.+|.++.. ...+|||||++|.++.++.. ..+. ..+..++..++.++|++|+||||
T Consensus 163 E~~nL~rL~~~-----gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~----~~~~-~~l~~qll~~l~~lH~~gIVHrD 230 (397)
T 4gyi_A 163 EFAFMKALYEE-----GFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS----VPDP-ASLYADLIALILRLAKHGLIHGD 230 (397)
T ss_dssp HHHHHHHHHHT-----TCSCCCEEEE--ETTEEEEECCSCEEGGGCCC----CSCH-HHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHHHHHhc-----CCCCCeeeec--cCceEEEEecCCccHhhhcc----cHHH-HHHHHHHHHHHHHHHHCCCcCCC
Confidence 78888888654 3567777653 45689999999998866521 1233 34557888899999999999999
Q ss_pred CCCCCeEEcCCC----------cEEEEecCCCCCCC
Q 011399 294 PHPGNLLATPEG----------KLAFLDFGMMSETP 319 (487)
Q Consensus 294 lkp~Nili~~~g----------~i~l~DFGla~~l~ 319 (487)
+||.|||++++| .+.+|||+.+...+
T Consensus 231 LKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 231 FNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 999999999877 38999999887654
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-12 Score=122.97 Aligned_cols=143 Identities=14% Similarity=0.088 Sum_probs=90.8
Q ss_pred HHhhhcccCCcccc-cccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIA-AASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 124 ~~~~f~~~~~~~ig-~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
+.+.+..++-++++ .|+.++||++... +|+.++||+.++....
T Consensus 15 l~~~~~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~~~~----------------------------------- 58 (264)
T 1nd4_A 15 WVERLFGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGALN----------------------------------- 58 (264)
T ss_dssp GTTTTTTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSCTTS-----------------------------------
T ss_pred HHHhcCCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcccch-----------------------------------
Confidence 34444445557776 5667999999764 7889999997643111
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecC--CCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCS 280 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~ 280 (487)
++..|+..+..+.+ . .+.+|+++... .+..+++|||++|.++. .. ..+.. .+..++...
T Consensus 59 -------~~~~E~~~l~~l~~----~-~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-~~-----~~~~~-~~~~~l~~~ 119 (264)
T 1nd4_A 59 -------ELQDEAARLSWLAT----T-GVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-SS-----HLAPA-EKVSIMADA 119 (264)
T ss_dssp -------CHHHHHHHHHHHHT----T-TCCBCCEEEEEECSSCEEEEEECCSSEETT-TS-----CCCHH-HHHHHHHHH
T ss_pred -------hhhHHHHHHHHHHh----C-CCCCCeEEEeccCCCCCEEEEEecCCcccC-cC-----cCCHh-HHHHHHHHH
Confidence 13345555555433 1 46688877543 34569999999999885 10 01111 122233334
Q ss_pred HHHHHHC----------------------------------------------------------CccccCCCCCCeEEc
Q 011399 281 LRQLLEY----------------------------------------------------------GYFHADPHPGNLLAT 302 (487)
Q Consensus 281 l~~lh~~----------------------------------------------------------givH~Dlkp~Nili~ 302 (487)
+..+|.. +++|+|+||+||+++
T Consensus 120 l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~ 199 (264)
T 1nd4_A 120 MRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVE 199 (264)
T ss_dssp HHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE
T ss_pred HHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE
Confidence 4444432 399999999999997
Q ss_pred CCCcEEEEecCCCCCCCHH
Q 011399 303 PEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 303 ~~g~i~l~DFGla~~l~~~ 321 (487)
+++.++|+|||.++.-++.
T Consensus 200 ~~~~~~liD~~~a~~g~~~ 218 (264)
T 1nd4_A 200 NGRFSGFIDCGRLGVADRY 218 (264)
T ss_dssp TTEEEEECCCTTCEEEETH
T ss_pred CCcEEEEEcchhcccCChH
Confidence 6655679999998865443
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-11 Score=116.66 Aligned_cols=137 Identities=15% Similarity=0.137 Sum_probs=92.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
..++.||.+.||++.. +|+.+++|+.+++.... .-++..
T Consensus 20 ~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~---------------------------------------~~~~~~ 58 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGT---------------------------------------TYDVER 58 (263)
T ss_dssp ECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTS---------------------------------------TTCHHH
T ss_pred eeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCC---------------------------------------HHHHHH
Confidence 4577788899999975 47899999987431100 002445
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec--CCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHH-----
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLE----- 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~----- 286 (487)
|++.+..+.+ .+.+|+++.. ..+..++||||++|.++.+.. ........+..++..++..||+
T Consensus 59 E~~~l~~l~~------~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~----~~~~~~~~~~~~l~~~l~~LH~~~~~~ 128 (263)
T 3tm0_A 59 EKDMMLWLEG------KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY----EDEQSPEKIIELYAECIRLFHSIDISD 128 (263)
T ss_dssp HHHHHHHHTT------TSCCCCEEEEEEETTEEEEEEECCSSEEHHHHC----CTTTCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHHHhc------CCCCCeEEEEEecCCceEEEEEecCCeehhhcc----CCcccHHHHHHHHHHHHHHHhCCCccc
Confidence 5555555532 3668888753 345578999999998876531 0111122344566677888887
Q ss_pred ------------------------------------------------------CCccccCCCCCCeEEcCCCcEEEEec
Q 011399 287 ------------------------------------------------------YGYFHADPHPGNLLATPEGKLAFLDF 312 (487)
Q Consensus 287 ------------------------------------------------------~givH~Dlkp~Nili~~~g~i~l~DF 312 (487)
.+++|+|+||+||++++++.+.|+||
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDw 208 (263)
T 3tm0_A 129 CPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDL 208 (263)
T ss_dssp CSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCC
T ss_pred CCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEc
Confidence 55899999999999976555679999
Q ss_pred CCCCCCCHH
Q 011399 313 GMMSETPEE 321 (487)
Q Consensus 313 Gla~~l~~~ 321 (487)
+.++.-++.
T Consensus 209 e~a~~gd~~ 217 (263)
T 3tm0_A 209 GRSGRADKW 217 (263)
T ss_dssp TTCEEEEHH
T ss_pred hhcccCCHH
Confidence 998765543
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.16 E-value=7.4e-11 Score=118.28 Aligned_cols=166 Identities=14% Similarity=0.142 Sum_probs=103.1
Q ss_pred CCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEec--CChHHHHHHHHHHHHHHHHH
Q 011399 105 PTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQR--PGIEEAIGLDFYLIRGVGFL 182 (487)
Q Consensus 105 ~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~--p~~~~~~~~dl~~l~~~~~~ 182 (487)
..++.+.+...+.+.++.. . ...+-++++.|.++.||+.... +..+++|+.+ ++....
T Consensus 19 ~~ld~~~l~~~l~~~~~~~-~---~~~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~-------------- 78 (359)
T 3dxp_A 19 QRFDTEALEAWMRQHVEGF-A---GPLSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLP-------------- 78 (359)
T ss_dssp -CCCHHHHHHHHHHHSTTC-C---CCCEEEECCC-CCSCEEEEECS--SCEEEEECCCC---------------------
T ss_pred cCCCHHHHHHHHHHhCCCC-C---CCceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCC--------------
Confidence 3567778888888776421 1 1123378999999999998864 5789999876 442100
Q ss_pred HhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCC-----CceEEEeecCCCCcC
Q 011399 183 INKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS-----GKVLTMEWVEGVKLN 257 (487)
Q Consensus 183 ~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~-----~~~LvmE~~~G~~L~ 257 (487)
..-++..|++.+..+.+ ..+.+|+++..... ..++||||++|..+.
T Consensus 79 ------------------------~~~~~~~E~~~l~~L~~-----~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~ 129 (359)
T 3dxp_A 79 ------------------------SAHAIEREYRVMDALAG-----TDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLW 129 (359)
T ss_dssp ---------------------------CHHHHHHHHHHHTT-----SSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCC
T ss_pred ------------------------cHHHHHHHHHHHHHhhc-----CCCCCCcEEEECCCCCccCCeEEEEEecCCeecC
Confidence 01134445555554433 34678988865433 378999999998885
Q ss_pred cHHHHHhcCCCHHHHHHHHHHHHHHHHHH---------------------------------------------------
Q 011399 258 EQVAIESQGLKVLDLVNTGIQCSLRQLLE--------------------------------------------------- 286 (487)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~--------------------------------------------------- 286 (487)
+.. ...........+..++...|..+|.
T Consensus 130 ~~~-~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 208 (359)
T 3dxp_A 130 DQS-LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHI 208 (359)
T ss_dssp CTT-CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCC
T ss_pred CCc-cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcC
Confidence 410 0111111112233445556666665
Q ss_pred -------CCccccCCCCCCeEEcCCCc--EEEEecCCCCCCCH
Q 011399 287 -------YGYFHADPHPGNLLATPEGK--LAFLDFGMMSETPE 320 (487)
Q Consensus 287 -------~givH~Dlkp~Nili~~~g~--i~l~DFGla~~l~~ 320 (487)
.+++|+|+||+||++++++. +.++||+.++.-++
T Consensus 209 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p 251 (359)
T 3dxp_A 209 PQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHP 251 (359)
T ss_dssp CSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECH
T ss_pred CCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCH
Confidence 46999999999999998764 69999999876544
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2.1e-09 Score=102.91 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=28.3
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
++|+|++|+|||+++++.+.|+||+.+..-++.
T Consensus 195 l~HGDl~~~Nil~~~~~~~~viDwe~a~~gdp~ 227 (272)
T 4gkh_A 195 VTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRY 227 (272)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTCEEEETH
T ss_pred EEcCCCCCCeEEEECCeEEEEEECcccccCCHH
Confidence 799999999999987777789999999865443
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.3e-08 Score=99.49 Aligned_cols=159 Identities=14% Similarity=0.141 Sum_probs=93.1
Q ss_pred CCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhh
Q 011399 106 TFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINK 185 (487)
Q Consensus 106 ~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~ 185 (487)
.++.+.+.+.+.+.+.. +....-++++.|....||+.. ..+++|+.++...
T Consensus 3 ~~~~~~l~~~l~~~~p~-----~~~~~i~~~~~G~~n~v~~v~-----~~~vlR~~~~~~~------------------- 53 (304)
T 3sg8_A 3 TYTFDQVEKAIEQLYPD-----FTINTIEISGEGNDCIAYEIN-----RDFIFKFPKHSRG------------------- 53 (304)
T ss_dssp CCCHHHHHHHHHHHCTT-----CCCCCCCEEEECSSEEEEEST-----TSEEEEEESSHHH-------------------
T ss_pred cCCHHHHHHHHHHhCCC-----ccceeeEecCCCCcceEEEEC-----CEEEEEecCCcch-------------------
Confidence 34566777777776632 112223679999999999863 4699998653200
Q ss_pred hhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCC-----CceEEEeecCCCCcCcHH
Q 011399 186 YVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS-----GKVLTMEWVEGVKLNEQV 260 (487)
Q Consensus 186 ~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~-----~~~LvmE~~~G~~L~~~~ 260 (487)
.. .+..|++.+..+. ....+.+|.++..... ..|+||||++|.++.+..
T Consensus 54 ----------------~~------~~~~E~~~l~~l~----~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~ 107 (304)
T 3sg8_A 54 ----------------ST------NLFNEVNILKRIH----NKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLL 107 (304)
T ss_dssp ----------------HH------HHHHHHHHHHHHT----TSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHH
T ss_pred ----------------HH------HHHHHHHHHHHHH----hcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCccc
Confidence 00 1233444444432 2345778888765322 348899999999887521
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHH------------------------------------------------------
Q 011399 261 AIESQGLKVLDLVNTGIQCSLRQLLE------------------------------------------------------ 286 (487)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~l~~lh~------------------------------------------------------ 286 (487)
. ...+......+..++...+..+|.
T Consensus 108 ~-~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 186 (304)
T 3sg8_A 108 L-NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIY 186 (304)
T ss_dssp H-HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGG
T ss_pred c-ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhcccc
Confidence 1 000000011111222222222221
Q ss_pred ----CCccccCCCCCCeEEcC--CCcEEEEecCCCCCCCH
Q 011399 287 ----YGYFHADPHPGNLLATP--EGKLAFLDFGMMSETPE 320 (487)
Q Consensus 287 ----~givH~Dlkp~Nili~~--~g~i~l~DFGla~~l~~ 320 (487)
..++|+|+||+||++++ ++.+.++||+.+..-++
T Consensus 187 ~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~ 226 (304)
T 3sg8_A 187 FKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226 (304)
T ss_dssp TCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT
T ss_pred ccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh
Confidence 35899999999999998 45578999999875443
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=6e-08 Score=98.34 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=35.3
Q ss_pred CCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC
Q 011399 105 PTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (487)
Q Consensus 105 ~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (487)
-+++.+.+.+.+. .+|.-.... .++.+++|.|..+.||+++...+|+.|+||...|.
T Consensus 10 ~~l~~~~v~~~l~-~~~~~~~~~--~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~ 66 (397)
T 2olc_A 10 ETLNESSAVALAV-KLGLFPSKS--TLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPY 66 (397)
T ss_dssp CCCCHHHHHHHHH-HTTC-------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC
T ss_pred ccCCHHHHHHHHH-hcCcCCCCC--ceEEEECCCCceEEEEEEEECCCCcEEEEEecchh
Confidence 3456666666665 444211110 13347899999999999987656789999998765
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.72 E-value=6e-08 Score=95.81 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=30.4
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
..+++|+|+||+||+++.++.+.++||+.++.-.+
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~~ 255 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLP 255 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEECCT
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcccCCh
Confidence 36899999999999998888999999998875443
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.1e-07 Score=93.01 Aligned_cols=34 Identities=24% Similarity=0.459 Sum_probs=28.1
Q ss_pred CccccCCCCCCeEEcC---CCcE-EEEecCCCCCCCHH
Q 011399 288 GYFHADPHPGNLLATP---EGKL-AFLDFGMMSETPEE 321 (487)
Q Consensus 288 givH~Dlkp~Nili~~---~g~i-~l~DFGla~~l~~~ 321 (487)
.++|+|+||+||++++ +|++ .|+||+.+..-++.
T Consensus 191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~ 228 (306)
T 3tdw_A 191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPD 228 (306)
T ss_dssp EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGG
T ss_pred eeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHH
Confidence 6899999999999987 4665 89999988765443
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.56 E-value=2.1e-07 Score=89.97 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=68.9
Q ss_pred HHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhc
Q 011399 110 AEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI 189 (487)
Q Consensus 110 ~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~ 189 (487)
+.+.+.+.+.+|.++.++ +++|.|..+.||+.++. +|+.|+||+..++...
T Consensus 3 ~~v~a~~~~l~G~~v~~v------~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~---------------------- 53 (288)
T 3f7w_A 3 NSVAARVTELTGREVAAV------AERGHSHRWHLYRVELA-DGTPLFVKALPDDAPA---------------------- 53 (288)
T ss_dssp HHHHHHHHHHHCCCEEEE------EEEEEETTEEEEEEEET-TSCEEEEEECCTTCCC----------------------
T ss_pred HHHHHHHHHhcCCCeEEE------EecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcc----------------------
Confidence 456778888899876554 88999999999999987 9999999987543111
Q ss_pred ccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCc
Q 011399 190 ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258 (487)
Q Consensus 190 ~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~ 258 (487)
... .|..|++.+..+. ....+.+|+++.. +..+++|||++++....
T Consensus 54 ----~~~-------------~~~~Ea~~L~~L~----~~~~vpvP~v~~~--~~~~lv~e~l~~~~~~~ 99 (288)
T 3f7w_A 54 ----LDG-------------LFRAEALGLDWLG----RSFGSPVPQVAGW--DDRTLAMEWVDERPPTP 99 (288)
T ss_dssp ----CTT-------------HHHHHHHHHHHHT----CSTTCCSCCEEEE--ETTEEEEECCCCCCCCH
T ss_pred ----hhh-------------HHHHHHHHHHHHH----hhCCCCcceEEec--cCceEEEEeecccCCCh
Confidence 000 0334555554443 3346889999875 45689999999877653
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.51 E-value=6.9e-07 Score=87.47 Aligned_cols=98 Identities=12% Similarity=0.124 Sum_probs=67.3
Q ss_pred CHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhh
Q 011399 108 PDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYV 187 (487)
Q Consensus 108 ~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~ 187 (487)
.++.+.+.+.+.+|.+ +...+-++|+.|.+.++|+... +++.++||+..+.....
T Consensus 20 ~~~~l~~~L~~~lg~~----~~i~~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~~~~~------------------- 74 (312)
T 3jr1_A 20 MWKSISQVLAEQFGAY----YFIKHKEKLYSGEMNEIWLIND--EVQTVFVKINERSYRSM------------------- 74 (312)
T ss_dssp HHHHHHHHHHHHHSSC----CCCCEEEEECCSSSSEEEEEES--SSCEEEEEEEEGGGHHH-------------------
T ss_pred cHHHHHHHHHHHhCCC----cceeeeEEeCCccceeeeEEEE--CCCeEEEEeCCcccHHH-------------------
Confidence 3466777888888864 1222338899999999999875 57889999876432111
Q ss_pred hcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeec--CCCCceEEEeecCCCCcC
Q 011399 188 DIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGVKLN 257 (487)
Q Consensus 188 ~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~~L~ 257 (487)
+..|++.+..+... ..+.+|+++.. ..+..++||||++|..+.
T Consensus 75 -----------------------~~~E~~~L~~L~~~----~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~ 119 (312)
T 3jr1_A 75 -----------------------FRAEADQLALLAKT----NSINVPLVYGIGNSQGHSFLLLEALNKSKNK 119 (312)
T ss_dssp -----------------------HHHHHHHHHHHHHT----TSSBCCCEEEEEECSSEEEEEEECCCCCCCC
T ss_pred -----------------------HHHHHHHHHHHHhh----CCCCcceEEEEeecCCceEEEEEeccCCCCC
Confidence 34455555555542 24778998753 345689999999998774
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=3.1e-07 Score=91.53 Aligned_cols=36 Identities=31% Similarity=0.379 Sum_probs=29.3
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
..+++|+|+||+||++++++.+.|+||+.+..-++.
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g~p~ 256 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRE 256 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCEEECHH
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEcccccccCCcH
Confidence 357999999999999985445799999998865543
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.38 E-value=8.9e-07 Score=86.79 Aligned_cols=159 Identities=14% Similarity=0.144 Sum_probs=89.5
Q ss_pred CCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCCh-HHHHHHHHHHHHHHHHHH
Q 011399 105 PTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGI-EEAIGLDFYLIRGVGFLI 183 (487)
Q Consensus 105 ~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~-~~~~~~dl~~l~~~~~~~ 183 (487)
++++.+++...++. +|. .++ ..+ ++++.|....+|+.... +| .+++|+.++.. ...
T Consensus 5 ~~~~~~~l~~~l~~-~~~--~~~-~~~--~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~~~~~--------------- 61 (322)
T 2ppq_A 5 TDITEDELRNFLTQ-YDV--GSL-TSY--KGIAEGVENSNFLLHTT-KD-PLILTLYEKRVEKND--------------- 61 (322)
T ss_dssp CCCCHHHHHHHHTT-BCC--CCE-EEE--EEECC---EEEEEEEES-SC-CEEEEEECC---CCH---------------
T ss_pred ccCCHHHHHHHHHh-CCC--Ccc-eEe--eccCCCcccceEEEEeC-Cc-cEEEEEeCCCCCHHH---------------
Confidence 45667777777765 554 111 122 78999999999999864 44 68899987531 111
Q ss_pred hhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecC--------CCCceEEEeecCCCC
Q 011399 184 NKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY--------TSGKVLTMEWVEGVK 255 (487)
Q Consensus 184 ~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~--------~~~~~LvmE~~~G~~ 255 (487)
+..|...+..+.+. .+.+|+++... .+..+++|+|++|..
T Consensus 62 ---------------------------l~~e~~~l~~L~~~-----g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~ 109 (322)
T 2ppq_A 62 ---------------------------LPFFLGLMQHLAAK-----GLSCPLPLPRKDGELLGELSGRPAALISFLEGMW 109 (322)
T ss_dssp ---------------------------HHHHHHHHHHHHHT-----TCCCCCBCCBTTCCSCEEETTEEEEEEECCCCBC
T ss_pred ---------------------------HHHHHHHHHHHHHC-----CCCCCcccCCCCCCEEEEECCEEEEEEEeCCCcC
Confidence 11222333333332 35678877532 234589999999987
Q ss_pred cCcH------------HHHHhc--C--C------CHH---HHH--------------HHHHHHHHHHHH-------HCCc
Q 011399 256 LNEQ------------VAIESQ--G--L------KVL---DLV--------------NTGIQCSLRQLL-------EYGY 289 (487)
Q Consensus 256 L~~~------------~~~~~~--~--~------~~~---~~~--------------~~~i~~~l~~lh-------~~gi 289 (487)
+... ..++.. + . ... ..+ ...+...+..+. ..++
T Consensus 110 ~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~l 189 (322)
T 2ppq_A 110 LRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPAGV 189 (322)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCCccc
Confidence 6431 011111 1 0 100 000 001223344444 2479
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCC
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSET 318 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l 318 (487)
+|+|+||+||++++++.+.++||+.+..-
T Consensus 190 iHgDl~~~Nil~~~~~~~~lIDf~~a~~g 218 (322)
T 2ppq_A 190 IHADLFQDNVFFLGDELSGLIDFYFACND 218 (322)
T ss_dssp ECSCCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred CCCCCCccCEEEeCCceEEEecchhccCc
Confidence 99999999999987665689999988753
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.28 E-value=7.2e-06 Score=80.45 Aligned_cols=53 Identities=25% Similarity=0.370 Sum_probs=37.4
Q ss_pred CCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC
Q 011399 104 LPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (487)
Q Consensus 104 ~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (487)
.+.++.+.+...+ +.+|...+. .-++++ |....||+.... +|+.+++|+.+|+
T Consensus 8 ~~~l~~~~i~~~l-~~~g~~~~~-----~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~ 60 (328)
T 1zyl_A 8 FQTLHPDTIMDAL-FEHGIRVDS-----GLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPE 60 (328)
T ss_dssp CCCCCHHHHHHHH-HHTTCCCCS-----CCEEEC-CSSSEEEEECCT-TCCCEEEEEECTT
T ss_pred CCCCCHHHHHHHH-HHcCCCCCc-----eEEeec-CcccceEEEEcC-CCCEEEEEEcCCC
Confidence 4456777888888 456654321 125777 888999988764 6778999998765
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.23 E-value=2.8e-06 Score=86.74 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=30.6
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
...++|+|+||+|||+++++ ++++||+.+..-++.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~ 265 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG 265 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH
Confidence 56899999999999998776 999999999876654
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=4.6e-06 Score=82.60 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=39.5
Q ss_pred CCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCC
Q 011399 105 PTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (487)
Q Consensus 105 ~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (487)
|+++.+.+...+.+.+|..... +...+.|.|....||+.... +| .+++|+.++.
T Consensus 4 p~l~~~~l~~~l~~~ygl~~~~----~~~l~~G~g~~N~vy~v~~~-~g-~~vLK~~~~~ 57 (339)
T 3i1a_A 4 QPIQAQQLIELLKVHYGIDIHT----AQFIQGGADTNAFAYQADSE-SK-SYFIKLKYGY 57 (339)
T ss_dssp CSSCTTHHHHHHHHHHCCCCSE----EEEETTTSCSSCEEEEEECS-SC-EEEEEEEECS
T ss_pred CCCCHHHHHHHHHHHcCCCcce----eEEeeccCccccceEEEEeC-CC-CEEEEEecCc
Confidence 5677788888888888875432 32244566668999999865 56 9999988754
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=98.16 E-value=3.9e-06 Score=82.73 Aligned_cols=34 Identities=29% Similarity=0.416 Sum_probs=28.9
Q ss_pred CCccccCCCCCCeEEcCC----CcEEEEecCCCCCCCH
Q 011399 287 YGYFHADPHPGNLLATPE----GKLAFLDFGMMSETPE 320 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~----g~i~l~DFGla~~l~~ 320 (487)
.+++|+|+||+||+++++ +.+.++||+.+..-++
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~ 220 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR 220 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence 579999999999999875 6899999998875443
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.15 E-value=4.4e-06 Score=81.17 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=27.7
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~ 321 (487)
.++|+|++|+||+ ..+|++.++||..++.-++.
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~~~ 206 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGMNDPL 206 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEEECTH
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccCCCHH
Confidence 4899999999999 56788999999988764443
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00013 Score=74.52 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=33.5
Q ss_pred HHHHHHHHHhCCCHHhh-hcccCCcccccccccEEEEEEEcc-------CCcEEEEEEecC
Q 011399 111 EAFSCIERELGLTLDSI-FSSISPSPIAAASLGQVYKAQLKY-------SGQIVAVKVQRP 163 (487)
Q Consensus 111 ~~~~~i~~~lg~~~~~~-f~~~~~~~ig~Gs~gqV~~a~~~~-------~g~~VAVKv~~p 163 (487)
.+..++.+-++..|..+ -..+.-++|+.|-...||++.... +++.+++|+-.+
T Consensus 55 ~a~~l~~~~l~~~w~~~~~~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~ 115 (429)
T 1nw1_A 55 RAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN 115 (429)
T ss_dssp HHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred HHHHHHHHhccCCcCCCCccceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC
Confidence 34444555455545422 012333789999999999998752 257899999754
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=9.9e-05 Score=73.70 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=26.2
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCC
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~ 319 (487)
.+++|+|+||+|||++.+ .+.++||..++.-+
T Consensus 212 ~~l~HgDl~~~Nil~~~~-~~~lID~e~a~~g~ 243 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNK-CLRLIDFEYSGFNF 243 (369)
T ss_dssp EEEECSCCCGGGEEECC--CEEECCCTTCEEEE
T ss_pred eEEEeCCCCcccEEecCC-cEEEEEecCCCCCc
Confidence 368999999999999754 49999999887543
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00025 Score=71.13 Aligned_cols=162 Identities=15% Similarity=0.199 Sum_probs=89.2
Q ss_pred HHHHHHHHHhCCCHHhh-hcccCCcccccccccEEEEEEEcc-------CCcEEEEEEecCChHHHHHHHHHHHHHHHHH
Q 011399 111 EAFSCIERELGLTLDSI-FSSISPSPIAAASLGQVYKAQLKY-------SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFL 182 (487)
Q Consensus 111 ~~~~~i~~~lg~~~~~~-f~~~~~~~ig~Gs~gqV~~a~~~~-------~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~ 182 (487)
.+..++.+-++..|..+ -..+.-+++..|--..+|++.... +++.|++|+-.+...
T Consensus 32 ~~~~~~~~~l~~~W~~~~~~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~---------------- 95 (379)
T 3feg_A 32 RAYQWCREYLGGAWRRVQPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQ---------------- 95 (379)
T ss_dssp HHHHHHHHHHCGGGGGCCGGGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---C----------------
T ss_pred HHHHHHHHHccCcCCCCCcCceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccc----------------
Confidence 34455556566555542 134555789889899999998742 357899998532100
Q ss_pred HhhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcH---
Q 011399 183 INKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ--- 259 (487)
Q Consensus 183 ~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~--- 259 (487)
.. .+..+|.+++..+... .+ .|+++....+ .+||||++|..+..-
T Consensus 96 ----------~~--------------~~~~rE~~vl~~L~~~-----gv-~P~ll~~~~~--g~v~e~i~G~~l~~~~l~ 143 (379)
T 3feg_A 96 ----------GV--------------DSLVLESVMFAILAER-----SL-GPQLYGVFPE--GRLEQYIPSRPLKTQELR 143 (379)
T ss_dssp ----------CH--------------HHHHHHHHHHHHHHHT-----TS-SCCEEEEETT--EEEEECCSEEECCGGGGG
T ss_pred ----------hH--------------HHHHHHHHHHHHHHhc-----CC-CCeEEEEcCC--ccEEEEecCccCChhHhC
Confidence 00 0123455666555542 22 4777765443 499999999777531
Q ss_pred ------------HHHHhcC------CC-HHHHHH---HHH-------------------HHHHHHH----H----HCCcc
Q 011399 260 ------------VAIESQG------LK-VLDLVN---TGI-------------------QCSLRQL----L----EYGYF 290 (487)
Q Consensus 260 ------------~~~~~~~------~~-~~~~~~---~~i-------------------~~~l~~l----h----~~giv 290 (487)
..++... .. ..+.+. .++ ...+..+ - ...++
T Consensus 144 ~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~ 223 (379)
T 3feg_A 144 EPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFC 223 (379)
T ss_dssp CHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEE
Confidence 0112211 11 111111 111 0111222 1 13689
Q ss_pred ccCCCCCCeEEcCC----CcEEEEecCCCCCCCH
Q 011399 291 HADPHPGNLLATPE----GKLAFLDFGMMSETPE 320 (487)
Q Consensus 291 H~Dlkp~Nili~~~----g~i~l~DFGla~~l~~ 320 (487)
|+|++++||+++++ +.+.++||..++.-++
T Consensus 224 H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~ 257 (379)
T 3feg_A 224 HNDIQEGNILLLSEPENADSLMLVDFEYSSYNYR 257 (379)
T ss_dssp CSCCCGGGEEEESCC---CCEEECCCTTCEEEEH
T ss_pred cCCCCCCeEEEcCCCCccCcEEEEecccCCcCCh
Confidence 99999999999876 7899999999986544
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0006 Score=70.10 Aligned_cols=32 Identities=9% Similarity=-0.014 Sum_probs=23.1
Q ss_pred CcccccccccEEEEEEEccCCcEEEEEEecCC
Q 011399 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (487)
Q Consensus 133 ~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (487)
-++|+.|-...+|+.....++..+++|+..++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~ 144 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPK 144 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCC
Confidence 37899999999999987533588999987543
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0025 Score=64.72 Aligned_cols=32 Identities=19% Similarity=0.341 Sum_probs=28.1
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
.++|+|++++||+ +.++.+.++||..++.-.+
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~~ 294 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAINFA 294 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEEEEH
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCcCCh
Confidence 5899999999999 7888999999999986544
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=87.62 E-value=0.2 Score=50.17 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=27.2
Q ss_pred CccccCCCCCCeEEc------CCCcEEEEecCCCCCCCH
Q 011399 288 GYFHADPHPGNLLAT------PEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 288 givH~Dlkp~Nili~------~~g~i~l~DFGla~~l~~ 320 (487)
.++|+|++++|||+. +++.++++||-.++.-.+
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~ 283 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYR 283 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEH
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCc
Confidence 368999999999993 457799999999886444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 487 | ||||
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 5e-06 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-05 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-05 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-05 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-04 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-04 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-04 | |
| d1zyla1 | 325 | d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: | 6e-04 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 7e-04 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 7e-04 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 8e-04 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 0.001 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 0.001 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 0.001 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 0.001 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 0.002 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 0.002 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 0.002 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 0.002 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 0.004 |
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (108), Expect = 5e-06
Identities = 39/199 (19%), Positives = 64/199 (32%), Gaps = 40/199 (20%)
Query: 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDV 194
P+ G VY A+ K S I+A+KV E G++ L R V + + ++
Sbjct: 13 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNI 68
Query: 195 VALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGV 254
+ L + + V + +Y + E +
Sbjct: 69 LRLYG-----YFHDATRVY----------------------LILEYAPLGTVYRELQKLS 101
Query: 255 KLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
K +EQ T + +L H D P NLL G+L DFG
Sbjct: 102 KFDEQRTAT---------YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 152
Query: 315 MSETPEEARFAIIGHVVHM 333
P R + G + ++
Sbjct: 153 SVHAPSSRRTTLCGTLDYL 171
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 43.9 bits (103), Expect = 2e-05
Identities = 30/215 (13%), Positives = 61/215 (28%), Gaps = 34/215 (15%)
Query: 142 GQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201
V + K + + AVK+ + + E
Sbjct: 17 SVVRRCIHKPTCKEYAVKIIDV------------------------TGGGSFSAEEVQEL 52
Query: 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA 261
+E++ +++ +L E + +D L E V L+E+
Sbjct: 53 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 112
Query: 262 IESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE-TPE 320
+ + + + L + H D P N+L + + DFG + P
Sbjct: 113 RK---------IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 163
Query: 321 EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV 355
E + G ++ E D + D+
Sbjct: 164 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 198
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (103), Expect = 3e-05
Identities = 30/186 (16%), Positives = 51/186 (27%), Gaps = 39/186 (20%)
Query: 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVV 195
+ S G+V+ A+ K + Q A+K + V
Sbjct: 10 LGKGSFGKVFLAEFKKTNQFFAIKALKKD------------------------------V 39
Query: 196 ALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVK 255
L+D+ E + ++ + +Y +G L K
Sbjct: 40 VLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK 99
Query: 256 LNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMM 315
+ A I L+ L G + D N+L +G + DFGM
Sbjct: 100 FDLSRATF---------YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 150
Query: 316 SETPEE 321
E
Sbjct: 151 KENMLG 156
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.5 bits (102), Expect = 3e-05
Identities = 36/223 (16%), Positives = 69/223 (30%), Gaps = 63/223 (28%)
Query: 142 GQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201
G V+K K SG ++A K+ I+
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKP--------------------------------AI 47
Query: 202 ASRVYQELNYVQE--GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 259
+++ +EL + E F + ++ I ++ G L + ++ EQ
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS---ICMEHMDGGSLDQVLKKAGRIPEQ 104
Query: 260 VAIE-----SQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
+ + +GL L + H D P N+L G++ DFG+
Sbjct: 105 ILGKVSIAVIKGLTYLREKH-------------KIMHRDVKPSNILVNSRGEIKLCDFGV 151
Query: 315 MSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357
+ + + +G R Y M+ + S D+
Sbjct: 152 SGQLIDSMANSFVGT------RSY--MSPERLQGTHYSVQSDI 186
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 1e-04
Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 51/216 (23%)
Query: 142 GQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201
G VYKA+ K +G++VA+K R E +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTET-------------------------------EGV 44
Query: 202 ASRVYQELNYVQE--GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 259
S +E++ ++E N + + + + + F K + + G+ L
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI 104
Query: 260 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS--E 317
+ Q L+ L + H D P NLL EG + DFG+
Sbjct: 105 KSYLFQLLQ-----------GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 318 TPEEARFAIIGHVVHM-----VNRDYEAMARDYYAL 348
P + + + + Y + A D ++L
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 2e-04
Identities = 37/225 (16%), Positives = 66/225 (29%), Gaps = 46/225 (20%)
Query: 140 SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199
+ G+V+KA+ + +GQ VA+K E+ +
Sbjct: 22 TFGEVFKARHRKTGQKVALKKVLMENEK-------------------------------E 50
Query: 200 EFASRVYQELNYVQE--GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLN 257
F +E+ +Q +N ++ K Y L ++ E
Sbjct: 51 GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY-----LVFDFCEHDLAG 105
Query: 258 EQV-AIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 316
+ L + V + L + H D N+L T +G L DFG+
Sbjct: 106 LLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL-- 163
Query: 317 ETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361
AR + + Y + L + D P +
Sbjct: 164 -----ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPI 203
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (94), Expect = 3e-04
Identities = 36/221 (16%), Positives = 65/221 (29%), Gaps = 44/221 (19%)
Query: 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVV 195
+ + G VY VA+K I+ + ++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKD-----------------RISDWGEL------ 48
Query: 196 ALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVK 255
+RV E KK+ + V+ +++ VL +E E V+
Sbjct: 49 ----PNGTRVPME---------VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 95
Query: 256 LNEQVAIESQGLKVLDLVNTGIQ--CSLRQLLEYGYFHADPHPGN-LLATPEGKLAFLDF 312
E L+ + Q ++R G H D N L+ G+L +DF
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Query: 313 GMMSETPEEARFAIIGHVVHM-----VNRDYEAMARDYYAL 348
G + + G V+ Y + ++L
Sbjct: 156 GSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (93), Expect = 3e-04
Identities = 54/326 (16%), Positives = 96/326 (29%), Gaps = 46/326 (14%)
Query: 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDV 194
PI + + G V A + VA+K +
Sbjct: 24 PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN--------------------------- 56
Query: 195 VALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGV 254
A R Y+EL ++ N + L +V P + L ME ++
Sbjct: 57 ----QTHAKRAYRELVLMKC-VNHKNIISLL----NVFTPQKTLEEFQDVYLVMELMDAN 107
Query: 255 KLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
QV + + + + C ++ L G H D P N++ + L LDFG+
Sbjct: 108 LC--QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165
Query: 315 MSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV----DVTPIVPALRNFFDD 370
+ + +D S V + + D
Sbjct: 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
Query: 371 ALNSSVSELNFKT--IVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA 428
N + +L + L + Y N P Y L L + L + K+ A
Sbjct: 226 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL-FPDSLFPADSEHNKLKA 284
Query: 429 ASYPYFAKRLLTDPNPYLRDALVELL 454
+ ++L +P R ++ + L
Sbjct: 285 SQARDLLSKMLV-IDPAKRISVDDAL 309
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Score = 39.4 bits (91), Expect = 6e-04
Identities = 36/232 (15%), Positives = 64/232 (27%), Gaps = 34/232 (14%)
Query: 128 FSSISPSPI--AAASLG---------------QVYKAQLKYSGQIVAVKVQRPG------ 164
F ++ P I A G +VY+ Q + + VK RP
Sbjct: 5 FQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDE-DRRRFVVKFYRPERWTADQ 63
Query: 165 IEEAIGLDFYLIRG------VGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNA 218
I E L+ + + A+ R ++ N Q
Sbjct: 64 ILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVG 123
Query: 219 RRFKKLYADKEDVLVPDIF-WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGI 277
R +++ L + + E L +++ LK D + +
Sbjct: 124 RYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS-GLKAAFLKATDELIAAV 182
Query: 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGH 329
R+ H D H GN+L F+D P ++ +
Sbjct: 183 TAHWREDFTVLRLHGDCHAGNILWRDGPM--FVDLDDARNGPAVQDLWMLLN 232
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (91), Expect = 7e-04
Identities = 31/227 (13%), Positives = 64/227 (28%), Gaps = 58/227 (25%)
Query: 142 GQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201
G+ K + K G+I+ K G ++ +
Sbjct: 18 GRCQKIRRKSDGKILVWKELDYG-------------------------------SMTEAE 46
Query: 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKV-LTMEWVEGVKLNEQV 260
+ E+N ++E ++ + D T+ + + ME+ EG L +
Sbjct: 47 KQMLVSEVNLLRELKHPNIVRYYDR----------IIDRTNTTLYIVMEYCEGGDLASVI 96
Query: 261 AIESQGLKVLD----------LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFL 310
++ + LD L +C R + H D P N+ + +
Sbjct: 97 TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 156
Query: 311 DFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357
DFG+ + M+ + + D+
Sbjct: 157 DFGLARILNHD------TSFAKAFVGTPYYMSPEQMNRMSYNEKSDI 197
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (91), Expect = 7e-04
Identities = 37/222 (16%), Positives = 68/222 (30%), Gaps = 55/222 (24%)
Query: 142 GQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201
G+VYKAQ K + + A KV EE +
Sbjct: 26 GKVYKAQNKETSVLAAAKVIDTKSEEEL-------------------------------- 53
Query: 202 ASRVYQELNYVQEGQ--NARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 259
E++ + N + + + ++ + +E+ G ++
Sbjct: 54 -EDYMVEIDILASCDHPNIVKLLDAFYYENNLW-------------ILIEFCAGGAVDAV 99
Query: 260 VAIESQGLKVLDLVNTGIQ--CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM--M 315
+ + L + Q +L L + H D GN+L T +G + DFG+
Sbjct: 100 MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 159
Query: 316 SETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357
+ + R + IG M E + + DV
Sbjct: 160 NTRTIQRRDSFIGTPYWM---APEVVMCETSKDRPYDYKADV 198
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.3 bits (91), Expect = 8e-04
Identities = 31/234 (13%), Positives = 68/234 (29%), Gaps = 46/234 (19%)
Query: 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGF 181
LT++ FS I G+VY + +G++ A+K + + +
Sbjct: 1 LTMND-FSVHRI--IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER-I 56
Query: 182 LINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYT 241
+++ +V + F + KL
Sbjct: 57 MLSLVSTGDCPFIVCMSYAFHTP-----------------DKLS---------------- 83
Query: 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL---EYGYFHADPHPGN 298
++ + G L+ + G+ + + L + D P N
Sbjct: 84 ----FILDLMNGGDLHYH--LSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 137
Query: 299 LLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352
+L G + D G+ + ++ A +G +M + + D+ S
Sbjct: 138 ILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 191
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.7 bits (89), Expect = 0.001
Identities = 19/183 (10%), Positives = 47/183 (25%), Gaps = 47/183 (25%)
Query: 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVV 195
I + S G +Y +G+ VA+K++
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLEC--------------------------------- 41
Query: 196 ALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVK 255
+ +++ E + Q + + + + + + K
Sbjct: 42 --VKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK 99
Query: 256 LNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG---KLAFLDF 312
+ + + + + + + H D P N L + +DF
Sbjct: 100 FSLKTVLLLA---------DQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 150
Query: 313 GMM 315
G+
Sbjct: 151 GLA 153
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.7 bits (89), Expect = 0.001
Identities = 42/289 (14%), Positives = 78/289 (26%), Gaps = 50/289 (17%)
Query: 140 SLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFL--------INKY 186
+ G+V++A+ +VAVK+ + + DF R + +
Sbjct: 25 AFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF--QREAALMAEFDNPNIVKLL 82
Query: 187 VDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVL 246
+ L+ E+ + Y +LN + L +S
Sbjct: 83 GVCAVGKPMCLLFEYMA--YGDLNEFLRSMSPHTVCSLSHSDLSTR-----ARVSSPGPP 135
Query: 247 TMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGK 306
+ E + + QVA + L E + H D N L
Sbjct: 136 PLSCAEQLCIARQVA-----------------AGMAYLSERKFVHRDLATRNCLVGENMV 178
Query: 307 LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDY---YALDFLSPDVDVTPIVPA 363
+ DFG+ + G+ + D + V + I
Sbjct: 179 VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY 238
Query: 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVP-AYYALILRSLT 411
+ + V + DG + P N P Y L+ +
Sbjct: 239 GLQPYYGMAHEEV----IYYVRDGN---ILACPENCPLELYNLMRLCWS 280
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.4 bits (89), Expect = 0.001
Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 44/187 (23%)
Query: 140 SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199
S G VY A+ + ++VA+K +++ +
Sbjct: 27 SFGAVYFARDVRNSEVVAIKKMSYSGKQS------------------------------N 56
Query: 200 EFASRVYQELNYVQEGQ--NARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLN 257
E + +E+ ++Q+ + N +++ Y + + +Y G + V L
Sbjct: 57 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW---LVMEYCLGSASDLLEVHKKPLQ 113
Query: 258 EQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317
E V G L L + H D GN+L + G + DFG S
Sbjct: 114 EVEIAA---------VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 164
Query: 318 TPEEARF 324
F
Sbjct: 165 MAPANSF 171
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 38.5 bits (89), Expect = 0.001
Identities = 36/229 (15%), Positives = 67/229 (29%), Gaps = 55/229 (24%)
Query: 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVV 195
+ + G V++ + +G A K E D
Sbjct: 34 LGTGAFGVVHRVTERATGNNFAAKFVMTPHES-------------------------DKE 68
Query: 196 ALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVK 255
+ E + L + + D ++ V+ E++ G +
Sbjct: 69 TVRKEI--QTMSVLRH----PTLVNLHDAFEDDNEM-------------VMIYEFMSGGE 109
Query: 256 LNEQVAIESQGLKVLDLVNTGIQC--SLRQLLEYGYFHADPHPGNLLATPE--GKLAFLD 311
L E+VA E + + V Q L + E Y H D P N++ T + +L +D
Sbjct: 110 LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLID 169
Query: 312 FGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360
FG+ V + E A + + D+ +
Sbjct: 170 FGL-------TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 211
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (87), Expect = 0.002
Identities = 31/182 (17%), Positives = 47/182 (25%), Gaps = 38/182 (20%)
Query: 140 SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199
VYKA+ K + QIVA+K I D
Sbjct: 10 QFATVYKARDKNTNQIVAIKK----------------------------IKLGHRSEAKD 41
Query: 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 259
+E+ +QE + L + +D+ + + + L
Sbjct: 42 GINRTALREIKLLQELSH-PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPS 100
Query: 260 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319
L L ++ H D P NLL G L DFG+
Sbjct: 101 HIK---------AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG 151
Query: 320 EE 321
Sbjct: 152 SP 153
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.7 bits (87), Expect = 0.002
Identities = 32/218 (14%), Positives = 57/218 (26%), Gaps = 44/218 (20%)
Query: 140 SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199
S V A+ + + A+K+ + K I V +
Sbjct: 20 SFSTVVLARELATSREYAIKI----------------------LEKRHIIKENKVPYVTR 57
Query: 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 259
E V L++ + + D E + Y L + +E
Sbjct: 58 ER--DVMSRLDH----PFFVKLYFTFQDDEKLY---FGLSYAKNGELLKYIRKIGSFDET 108
Query: 260 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319
I +L L G H D P N+L + + DFG
Sbjct: 109 CTR---------FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 159
Query: 320 EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357
E++ A V + ++ + D+
Sbjct: 160 PESKQARANSFVGT----AQYVSPELLTEKSACKSSDL 193
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (86), Expect = 0.002
Identities = 29/225 (12%), Positives = 64/225 (28%), Gaps = 44/225 (19%)
Query: 136 IAAASLGQVYKAQL---KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITT 192
+ + G+V+ + +G++ A+KV +
Sbjct: 32 LGTGAYGKVFLVRKISGHDTGKLYAMKV-----------------------------LKK 62
Query: 193 DVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVE 252
+ + E ++ + + L+ + + DY +G L +
Sbjct: 63 ATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ 122
Query: 253 GVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDF 312
+ E + V ++V +L L + G + D N+L G + DF
Sbjct: 123 RERFTEHEVQ----IYVGEIV-----LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDF 173
Query: 313 GMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357
G+ E + + + + D VD
Sbjct: 174 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD---KAVDW 215
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 37.7 bits (87), Expect = 0.002
Identities = 33/226 (14%), Positives = 75/226 (33%), Gaps = 55/226 (24%)
Query: 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVV 195
+ + + G V++ K +G++ K D
Sbjct: 37 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPL-------------------------DKY 71
Query: 196 ALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVK 255
+ +E + +L++ + DK ++ VL +E++ G +
Sbjct: 72 TVKNEI--SIMNQLHH----PKLINLHDAFEDKYEM-------------VLILEFLSGGE 112
Query: 256 LNEQVAIESQGLKVLDLVNTGIQC--SLRQLLEYGYFHADPHPGNLL--ATPEGKLAFLD 311
L +++A E + +++N Q L+ + E+ H D P N++ + +D
Sbjct: 113 LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIID 172
Query: 312 FGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357
FG+ A +V + E A + + + D+
Sbjct: 173 FGL-------ATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDM 211
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 36.3 bits (83), Expect = 0.004
Identities = 30/228 (13%), Positives = 66/228 (28%), Gaps = 47/228 (20%)
Query: 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTD 193
+ V+ + VK + G + G D+ +
Sbjct: 6 KLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYG---------DLHFSV 55
Query: 194 VVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEG 253
+ R Q+L + K+YA + + ++ ++ +V E
Sbjct: 56 LAIRSARNEFRALQKLQGL-------AVPKVYAWEGNAVLMELIDAKELYRVRVENPDE- 107
Query: 254 VKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFG 313
+ + + + + G H D N+L + EG + +DF
Sbjct: 108 --VLDMIL-----------------EEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFP 147
Query: 314 MMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361
E EE ++ RD + Y++ + + D+ +
Sbjct: 148 QSVEVGEE-------GWREILERDVRNIIT-YFSRTY-RTEKDINSAI 186
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 487 | |||
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.98 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.98 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.98 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.98 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.98 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.98 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.97 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.97 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.97 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.97 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.97 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.97 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.97 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.97 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.97 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.97 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.97 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.97 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.97 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.96 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.96 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.96 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.96 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.96 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.96 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.96 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.96 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.96 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.96 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.96 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.96 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.96 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.95 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.95 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.95 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.95 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.94 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.94 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.94 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.94 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.94 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.94 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.94 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.93 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.93 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.92 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.92 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.92 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.89 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.74 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.39 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 98.22 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.21 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.61 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.01 |
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-37 Score=302.97 Aligned_cols=290 Identities=18% Similarity=0.169 Sum_probs=172.3
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+-|+.+ +.||+|+||.||+|+++.+|+.||||+++........ ..+.+.+..+....|+|++++++.+
T Consensus 6 d~y~~~--~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~------~~~~~Ei~il~~l~HpnIv~l~~~~---- 73 (322)
T d1s9ja_ 6 DDFEKI--SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAF---- 73 (322)
T ss_dssp GGEEEE--EEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHH------HHHHHHGGGGGGCCCTTBCCEEEEE----
T ss_pred cCCEEE--EEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHH------HHHHHHHHHHHhCCCCCCCcEEEEE----
Confidence 335555 6799999999999999989999999998754322111 1111222222233455555544321
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQL 284 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~l 284 (487)
...+..+|||||++|++|.++.... .........+..++..|+.|+
T Consensus 74 ---------------------------------~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yL 120 (322)
T d1s9ja_ 74 ---------------------------------YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120 (322)
T ss_dssp ---------------------------------ECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------EECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 2235578999999999999875432 222334455678899999999
Q ss_pred HH-CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 285 LE-YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 285 h~-~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
|+ +||+||||||+|||++.+|.+||+|||+|+.+.+....+++| +..+..||. ..-+..++++|+||+||.
T Consensus 121 H~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~G---T~~Y~APEv-----l~~~~y~~~~DiWSlGvi 192 (322)
T d1s9ja_ 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPER-----LQGTHYSVQSDIWSMGLS 192 (322)
T ss_dssp HHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CC---SSCCCCHHH-----HHCSCCCTTHHHHHHHHH
T ss_pred HHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccC---CccccCchH-----HcCCCCCcHHHHHHHHHH
Confidence 97 699999999999999999999999999998765443322222 334445554 444556899999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh-----
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL----- 438 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l----- 438 (487)
+++++++.. |+...+...................|+......+.. ........|.......... +....
T Consensus 193 l~ell~G~~--Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 266 (322)
T d1s9ja_ 193 LVEMAVGRY--PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL---SSYGMDSRPPMAIFELLDY-IVNEPPPKLP 266 (322)
T ss_dssp HHHHHHSSC--CSSCCCTTHHHHHC---------------------------------CCCCHHHHHHH-HHTSCCCCCC
T ss_pred HHHHHHCCC--CCCCCCHHHHHHHHHHHhcCCcccCCcccccccccc---cccccccccchhHHHHHhh-hhccCCccCc
Confidence 999998543 333222111111111111111111222211111111 0011111222222221111 11000
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
....++++++.+.+||..||++|++..+.+.|+||.
T Consensus 267 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~ 302 (322)
T d1s9ja_ 267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302 (322)
T ss_dssp BTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhC
Confidence 012478999999999999999999999999999994
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-36 Score=291.17 Aligned_cols=245 Identities=17% Similarity=0.192 Sum_probs=168.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||++.+....... .... +.+
T Consensus 12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~------------------------------~~~~------~~~ 55 (263)
T d2j4za1 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG------------------------------VEHQ------LRR 55 (263)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTT------------------------------CHHH------HHH
T ss_pred EEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChH------------------------------HHHH------HHH
Confidence 6899999999999999989999999998632111000 0011 122
Q ss_pred HHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|++.+.++ ++++ |.+++ ....+..++|||||+||+|.+..... .........+..++..||.|||+.||+
T Consensus 56 E~~il~~l-----~hpn--Iv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~iv 128 (263)
T d2j4za1 56 EVEIQSHL-----RHPN--ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 128 (263)
T ss_dssp HHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhc-----CCCC--CCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 22222221 1222 12222 22345678999999999998875432 223334556678899999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
|||+||+|||++.+|.+||+|||++...+........ +++..++++.+.-...++++|+||+|+.+++++++
T Consensus 129 HrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~--------Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G 200 (263)
T d2j4za1 129 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 200 (263)
T ss_dssp CCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETT--------EEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred eeeeccccceecCCCCEeecccceeeecCCCcccccC--------CCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcC
Confidence 9999999999999999999999999887654222122 33444455555555568899999999999999985
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+...+...+. .. .+.+ ....++++++.+
T Consensus 201 ~--~Pf~~~~~~~~~~~i~----~~-------------------------~~~~--------------p~~~s~~~~~li 235 (263)
T d2j4za1 201 K--PPFEANTYQETYKRIS----RV-------------------------EFTF--------------PDFVTEGARDLI 235 (263)
T ss_dssp S--CTTCCSSHHHHHHHHH----TT-------------------------CCCC--------------CTTSCHHHHHHH
T ss_pred C--CCCCCCCHHHHHHHHH----cC-------------------------CCCC--------------CccCCHHHHHHH
Confidence 4 4565555444332221 11 1111 013468899999
Q ss_pred HHHHhhcCcccccccchhhccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+||.+||.+|++..+.+.||||.
T Consensus 236 ~~~L~~dp~~R~t~~eil~hp~~~ 259 (263)
T d2j4za1 236 SRLLKHNPSQRPMLREVLEHPWIT 259 (263)
T ss_dssp HHHTCSSGGGSCCHHHHHTCHHHH
T ss_pred HHHccCCHhHCcCHHHHHcCcCcC
Confidence 999999999999999999999985
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-36 Score=293.55 Aligned_cols=254 Identities=17% Similarity=0.167 Sum_probs=172.3
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChH---HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE---EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~---~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
.+.|+.+ +.||+|+||.||+|+++.+|+.||||+++.... +.+..++.+++ ...|+|++++++
T Consensus 19 ~~~Y~~~--~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~----------~l~HpnIv~~~~-- 84 (293)
T d1yhwa1 19 KKKYTRF--EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR----------ENKNPNIVNYLD-- 84 (293)
T ss_dssp TTTBCSC--EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHH----------HCCCTTBCCEEE--
T ss_pred ccccEEE--EEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHH----------hCCCCCEeeEeE--
Confidence 3446666 679999999999999988999999999863211 11111111111 112333333222
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSL 281 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l 281 (487)
+....+..|||||||+|++|.++.............+..++..||
T Consensus 85 -----------------------------------~~~~~~~~~ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL 129 (293)
T d1yhwa1 85 -----------------------------------SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQAL 129 (293)
T ss_dssp -----------------------------------EEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------EEEECCEEEEEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 122345678999999999998874433233334556778899999
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
.|||++||+||||||+|||++.+|.+||+|||+++.+..+.... ....+++..++++.+..+..++++|+||+|
T Consensus 130 ~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~------~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 203 (293)
T d1yhwa1 130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203 (293)
T ss_dssp HHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB------CCCCSCGGGCCHHHHSSSCBCTHHHHHHHH
T ss_pred HHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccc------cccccCCCccChhhhcCCCCCchhceehHh
Confidence 99999999999999999999999999999999998875432100 011233444555555556668899999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
+.+++++++. .|+.+.+....+..+. . .-.|.+.. ...
T Consensus 204 vilyemltG~--~Pf~~~~~~~~~~~~~---~-------------------------~~~~~~~~------------~~~ 241 (293)
T d1yhwa1 204 IMAIEMIEGE--PPYLNENPLRALYLIA---T-------------------------NGTPELQN------------PEK 241 (293)
T ss_dssp HHHHHHHHSS--CTTTTSCHHHHHHHHH---H-------------------------HCSCCCSS------------GGG
T ss_pred HHHHHHhhCC--CCCCCCCHHHHHHHHH---h-------------------------CCCCCCCC------------ccc
Confidence 9999999854 4554444322222111 1 01122111 013
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
.++.+++.+.+||.+||++|++..+.+.|+||+.
T Consensus 242 ~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~ 275 (293)
T d1yhwa1 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (293)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence 4788999999999999999999999999999964
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-36 Score=289.91 Aligned_cols=256 Identities=19% Similarity=0.202 Sum_probs=172.2
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHH---HHHHHHHHHHHHHHHhhhhhcccCCHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA---IGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~---~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (487)
+++.|+-+ +.||+|+||.||+|+++.+|+.||||+++....+. +..++++++ ...|+|++++++
T Consensus 10 p~d~Y~i~--~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~----------~l~HpnIv~l~~- 76 (288)
T d2jfla1 10 PEDFWEII--GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA----------SCDHPNIVKLLD- 76 (288)
T ss_dssp GGGTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHH----------HCCCTTBCCEEE-
T ss_pred cccCeEEe--EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHH----------hCCCCCCCeEEE-
Confidence 45667665 67999999999999999899999999986542221 111111111 112333333322
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHH
Q 011399 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQ 278 (487)
Q Consensus 201 ~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~ 278 (487)
+ ....+..+||||||+||+|.++......+++. ...+..++.
T Consensus 77 -----------------------------------~-~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~ 120 (288)
T d2jfla1 77 -----------------------------------A-FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 120 (288)
T ss_dssp -----------------------------------E-EEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred -----------------------------------E-EeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 1 12245678999999999998875444444444 556678899
Q ss_pred HHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH-----HcCCCCC
Q 011399 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY-----ALDFLSP 353 (487)
Q Consensus 279 ~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~ 353 (487)
.||.|||++||+||||||+|||++.+|.+||+|||++..+...... .. ...+++..++++++ ..+..++
T Consensus 121 ~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~-~~-----~~~Gt~~y~APE~l~~~~~~~~~y~~ 194 (288)
T d2jfla1 121 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR-RD-----SFIGTPYWMAPEVVMCETSKDRPYDY 194 (288)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHH-HT-----CCCSCCTTCCHHHHTTCSTTTSSTTT
T ss_pred HHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCccc-cc-----ccccccccCCHHHHhhcccCCCCCCh
Confidence 9999999999999999999999999999999999999877544221 11 11223333444443 2233467
Q ss_pred CCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHH
Q 011399 354 DVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPY 433 (487)
Q Consensus 354 ~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~ 433 (487)
++|+||+|+.+++++++. .|+.+.+...++..+. .. -.|.+..
T Consensus 195 k~DiwSlGvilyemltg~--~Pf~~~~~~~~~~~i~---~~-------------------------~~~~~~~------- 237 (288)
T d2jfla1 195 KADVWSLGITLIEMAEIE--PPHHELNPMRVLLKIA---KS-------------------------EPPTLAQ------- 237 (288)
T ss_dssp HHHHHHHHHHHHHHHHSS--CTTTTSCGGGHHHHHH---HS-------------------------CCCCCSS-------
T ss_pred hhhHHHHHHHHHHHhhCC--CCCCCCCHHHHHHHHH---cC-------------------------CCCCCCc-------
Confidence 789999999999999853 3554433222221111 10 0111110
Q ss_pred HHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 434 FAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 434 ~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
....++++++.+.+||.+||++|++..+.+.|+||..+
T Consensus 238 -----~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~ 275 (288)
T d2jfla1 238 -----PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275 (288)
T ss_dssp -----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred -----cccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 01347889999999999999999999999999999754
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-35 Score=290.01 Aligned_cols=259 Identities=17% Similarity=0.123 Sum_probs=162.4
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
.+.+.|+.. +.||+|+||+||+|+++.+|+.||||++......... ....++ +..+....|+|++++++
T Consensus 6 di~d~Y~~~--~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~--~~~~~E----i~il~~l~HpnIv~l~~--- 74 (307)
T d1a06a_ 6 DIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENE----IAVLHKIKHPNIVALDD--- 74 (307)
T ss_dssp CGGGTEEEE--EESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHH----HHHHHTCCCTTBCCEEE---
T ss_pred CCccceEEE--EEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHH--HHHHHH----HHHHHhCCCCCCCcEEE---
Confidence 455666655 6799999999999999989999999998754221100 000000 00111112333333222
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCS 280 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~ 280 (487)
+.+..+..|||||||+|++|.++... ...++ ....+..++..|
T Consensus 75 ----------------------------------~~~~~~~~~lvmE~~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~a 119 (307)
T d1a06a_ 75 ----------------------------------IYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDA 119 (307)
T ss_dssp ----------------------------------EEECSSEEEEEECCCCSCBHHHHHHT-CSCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------EEEECCEEEEEEeccCCCcHHHhhhc-ccCCCHHHHHHHHHHHHHH
Confidence 12234567899999999999887432 22333 445667889999
Q ss_pred HHHHHHCCccccCCCCCCeEEc---CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 281 LRQLLEYGYFHADPHPGNLLAT---PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 281 l~~lh~~givH~Dlkp~Nili~---~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
|.|||++|++|||+||+|||+. ++|.+||+|||+++..+..... ....++..+..|| .+.-+..++++|+
T Consensus 120 l~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~--~~~~GT~~y~APE-----~~~~~~~~~~~Di 192 (307)
T d1a06a_ 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL--STACGTPGYVAPE-----VLAQKPYSKAVDC 192 (307)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC--------------------CTTSCHH-----HHTTCCCCTHHHH
T ss_pred HHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCee--eeeeeCccccCcH-----HHcCCCCCcHHHh
Confidence 9999999999999999999995 5789999999999877654321 1122233344444 4445556889999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++++. .|+.+.+...+...+.. .....|+ .
T Consensus 193 wSlGvilyell~g~--~Pf~~~~~~~~~~~i~~----~~~~~~~-----------------------------------~ 231 (307)
T d1a06a_ 193 WSIGVIAYILLCGY--PPFYDENDAKLFEQILK----AEYEFDS-----------------------------------P 231 (307)
T ss_dssp HHHHHHHHHHHHSS--CSCCCSSHHHHHHHHHT----TCCCCCT-----------------------------------T
T ss_pred hhhhHHHHHHHhCC--CCCCCCCHHHHHHHHhc----cCCCCCC-----------------------------------c
Confidence 99999999999853 45655554443332221 0111110 0
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
...+.++++++.+.+||.+||..|++..+.+.|+||.-
T Consensus 232 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~ 269 (307)
T d1a06a_ 232 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 269 (307)
T ss_dssp TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred cccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence 11245788999999999999999999999999999963
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-35 Score=283.91 Aligned_cols=249 Identities=14% Similarity=0.102 Sum_probs=163.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++...... + . . .+. +.+
T Consensus 14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~---~-~------------------~--------~~~------~~~ 57 (288)
T d1uu3a_ 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIK---E-N------------------K--------VPY------VTR 57 (288)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH---T-T------------------C--------HHH------HHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccC---H-H------------------H--------HHH------HHH
Confidence 78999999999999998899999999986321100 0 0 0 001 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~giv 290 (487)
|.+.+.++ ++++| .+++. +..+..|+|||||+||+|.++.... .........+..++..||.|+|+.||+
T Consensus 58 E~~il~~l-----~HpnI--v~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~ii 130 (288)
T d1uu3a_ 58 ERDVMSRL-----DHPFF--VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 130 (288)
T ss_dssp HHHHHHHC-----CSTTB--CCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHc-----CCCCe--eEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEE
Confidence 22222222 12221 22222 2345678999999999998874432 223344556678889999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||||+|||++.+|.++|+|||+++.++......... ...+++..++++++.-...+.++|+||+|+.+++++++
T Consensus 131 HrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~----~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g 206 (288)
T d1uu3a_ 131 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN----SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206 (288)
T ss_dssp CSCCSGGGEEECTTSCEEECCCTTCEECC--------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred cCcCCccccccCCCceEEecccccceecccCCcccccc----cccCCccccCceeeccCCCCcccceehhhHHHHHHhhC
Confidence 99999999999999999999999999886543322111 12234444555555555568889999999999999985
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+...+...+...+. ...+.+. ...++++++.+
T Consensus 207 ~--~Pf~~~~~~~~~~~i~-----------------------------~~~~~~p--------------~~~s~~~~~li 241 (288)
T d1uu3a_ 207 L--PPFRAGNEYLIFQKII-----------------------------KLEYDFP--------------EKFFPKARDLV 241 (288)
T ss_dssp S--CSSCCSSHHHHHHHHH-----------------------------TTCCCCC--------------TTCCHHHHHHH
T ss_pred C--CCCCCcCHHHHHHHHH-----------------------------cCCCCCC--------------ccCCHHHHHHH
Confidence 3 4555544333322221 0111111 13578899999
Q ss_pred HHHHhhcCcccccccch------hhccccc
Q 011399 451 VELLFKDGRFRHVLYSP------FTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~------~~~~~~~ 474 (487)
.+||.+||+.|++..+. ..|+||+
T Consensus 242 ~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~ 271 (288)
T d1uu3a_ 242 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271 (288)
T ss_dssp HTTSCSSGGGSTTSGGGTCHHHHHTSGGGT
T ss_pred HHHccCCHhHCcCHHHHcCCHHHHcCCccC
Confidence 99999999999998764 4688884
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.2e-35 Score=285.63 Aligned_cols=258 Identities=17% Similarity=0.131 Sum_probs=173.1
Q ss_pred CCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 122 ~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
.++++.|+.+ +.||+|+||.||+|+++.+|+.||||+++......- .. .+.+.+..+.+....|+|++++++.
T Consensus 11 ~dp~~~y~~l--~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~-~~---~~~~~~Ei~il~~l~HpnIv~~~~~- 83 (309)
T d1u5ra_ 11 DDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN-EK---WQDIIKEVRFLQKLRHPNTIQYRGC- 83 (309)
T ss_dssp SCHHHHEEEE--EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHH-HH---HHHHHHHHHHHTTCCCTTBCCEEEE-
T ss_pred cCcHHhcEee--EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCH-HH---HHHHHHHHHHHHHCCCCCEeeEEEE-
Confidence 3567788888 789999999999999998999999999875422110 00 1111111111222234444443321
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQC 279 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~ 279 (487)
....+..+||||||+|+++..+. ....+.+. ...+..++..
T Consensus 84 ------------------------------------~~~~~~~~iv~E~~~~g~l~~~~-~~~~~l~e~~~~~i~~qi~~ 126 (309)
T d1u5ra_ 84 ------------------------------------YLREHTAWLVMEYCLGSASDLLE-VHKKPLQEVEIAAVTHGALQ 126 (309)
T ss_dssp ------------------------------------EEETTEEEEEEECCSEEHHHHHH-HHTSCCCHHHHHHHHHHHHH
T ss_pred ------------------------------------EEECCEEEEEEEecCCCchHHHH-HhCCCCCHHHHHHHHHHHHH
Confidence 12235678999999999886543 23334444 4556788999
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH---cCCCCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA---LDFLSPDVD 356 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~D 356 (487)
||.|||++||+||||||+|||++.+|.+||+|||++........ . .+++.+++++++. .+.+++++|
T Consensus 127 aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~--~--------~GT~~Y~APE~~~~~~~~~y~~~~D 196 (309)
T d1u5ra_ 127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS--F--------VGTPYWMAPEVILAMDEGQYDGKVD 196 (309)
T ss_dssp HHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC--C--------CSCGGGCCHHHHTTTTSCCBCTHHH
T ss_pred HHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCc--c--------ccCccccCHHHHhccCCCCcCchhh
Confidence 99999999999999999999999999999999999998764321 1 2334444444442 234577899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .|+.+.+....+..+. . .-.|.+.
T Consensus 197 iwSlGvilyel~~g~--~Pf~~~~~~~~~~~i~---~-------------------------~~~~~~~----------- 235 (309)
T d1u5ra_ 197 VWSLGITCIELAERK--PPLFNMNAMSALYHIA---Q-------------------------NESPALQ----------- 235 (309)
T ss_dssp HHHHHHHHHHHHHSS--CTTTTSCHHHHHHHHH---H-------------------------SCCCCCS-----------
T ss_pred hhhHHHHHHHHHHCC--CCCCCCCHHHHHHHHH---h-------------------------CCCCCCC-----------
Confidence 999999999999843 3444444332222211 1 0111110
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
....++++++.+..||.+||..|++..+.+.|+||.-+
T Consensus 236 --~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~ 273 (309)
T d1u5ra_ 236 --SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (309)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred --CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence 01346788999999999999999999999999999644
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=3.4e-35 Score=293.07 Aligned_cols=251 Identities=15% Similarity=0.178 Sum_probs=171.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||+++...... ...+. +.+..+....|+|++++++.
T Consensus 35 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~----~~~~~---~Ei~il~~l~HpnIv~~~~~------------- 94 (352)
T d1koba_ 35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----KYTVK---NEISIMNQLHHPKLINLHDA------------- 94 (352)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----HHHHH---HHHHHHTTCCSTTBCCEEEE-------------
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECCcchhH----HHHHH---HHHHHHHhCCCCCCCcEEEE-------------
Confidence 78999999999999998899999999987543211 11111 11111112234444443331
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~givH 291 (487)
++.....+||||||+|++|.+.......+++ ....+..+++.||.|||++||+|
T Consensus 95 ------------------------~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiH 150 (352)
T d1koba_ 95 ------------------------FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 150 (352)
T ss_dssp ------------------------EECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ------------------------EEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 2234567899999999999775433333334 44556788999999999999999
Q ss_pred cCCCCCCeEEc--CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLAT--PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~--~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|||||+|||++ .+|.+||+|||+++.+.+.... ....+.+..+++++..-...++++|+||+||.++++++
T Consensus 151 RDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyellt 223 (352)
T d1koba_ 151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV-------KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS 223 (352)
T ss_dssp CCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE-------EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCeEEEeecccceecCCCCce-------eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHh
Confidence 99999999998 5789999999999987654211 01112333344444445556888999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .|+.+.+....+..+.. .....|+. .....++++++.
T Consensus 224 G~--~Pf~~~~~~~~~~~i~~----~~~~~~~~-----------------------------------~~~~~s~~~~~l 262 (352)
T d1koba_ 224 GL--SPFAGEDDLETLQNVKR----CDWEFDED-----------------------------------AFSSVSPEAKDF 262 (352)
T ss_dssp SC--CSSCCSSHHHHHHHHHH----CCCCCCSS-----------------------------------TTTTSCHHHHHH
T ss_pred CC--CCCCCCCHHHHHHHHHh----CCCCCCcc-----------------------------------cccCCCHHHHHH
Confidence 53 46666555444433321 11111110 112457889999
Q ss_pred HHHHHhhcCcccccccchhhccccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
+.+||.+||..|++..+.+.|+||.-.
T Consensus 263 i~~~L~~dp~~R~s~~eil~Hp~~~~~ 289 (352)
T d1koba_ 263 IKNLLQKEPRKRLTVHDALEHPWLKGD 289 (352)
T ss_dssp HHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred HHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 999999999999999999999999643
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-35 Score=288.71 Aligned_cols=286 Identities=16% Similarity=0.098 Sum_probs=176.1
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++........ +.+.+. +.+
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~----------------------------~~~~~~------~~~ 49 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK----------------------------DGINRT------ALR 49 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC----------------------------------------CTH------HHH
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhh----------------------------HHHHHH------HHH
Confidence 5699999999999999989999999998644221100 001111 222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+.++ ++++|.--.-+....+..+|||||++|+.+..+... ..........+..++..||+|+|++|++||
T Consensus 50 Ei~il~~l-----~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHr 124 (299)
T d1ua2a_ 50 EIKLLQEL-----SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 124 (299)
T ss_dssp HHHHHHHC-----CCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHhC-----CCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecc
Confidence 22222222 122221111122334667999999999876554221 123456777888999999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.+||+|||+++.+....... .....+..+..||.+. .....++++|+||+|+.+++++++.
T Consensus 125 DiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~-~~~~gt~~y~aPE~~~----~~~~~~~~~DiwSlGvil~el~~g~- 198 (299)
T d1ua2a_ 125 DLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY-THQVVTRWYRAPELLF----GARMYGVGVDMWAVGCILAELLLRV- 198 (299)
T ss_dssp CCCGGGEEECTTCCEEECCCGGGSTTTSCCCCC-CCSCCCCTTCCHHHHT----TCSCCCHHHHHHHHHHHHHHHHHSS-
T ss_pred cCCcceEEecCCCccccccCccccccCCCcccc-cceecChhhccHHHHc----cCCCCChhhhhhhcchHHHHHHhCc-
Confidence 999999999999999999999998765432110 0111123344454431 2234577899999999999999853
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCC-CChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFN-VPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~-~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.++...+-...+..+...+...... .|.... . .........|. .| ........++++++.+.
T Consensus 199 -~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~-------~~--~~~~~~~~s~~~~dll~ 261 (299)
T d1ua2a_ 199 -PFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS-----L--PDYVTFKSFPG-------IP--LHHIFSAAGDDLLDLIQ 261 (299)
T ss_dssp -CSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS-----S--TTCCCCCCCCC-------CC--HHHHCTTCCHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHhcCCCChhhccchhc-----c--chhhhhccCCC-------CC--hHHhcccCCHHHHHHHH
Confidence 4555555444444444333211110 110000 0 00000000011 11 12334467899999999
Q ss_pred HHHhhcCcccccccchhhcccccccccccc
Q 011399 452 ELLFKDGRFRHVLYSPFTINLVDFEFVVCD 481 (487)
Q Consensus 452 ~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~ 481 (487)
+||..||++|++..+.+.|+||.-++.|+.
T Consensus 262 ~~L~~dP~~R~sa~e~L~Hp~f~~~p~p~~ 291 (299)
T d1ua2a_ 262 GLFLFNPCARITATQALKMKYFSNRPGPTP 291 (299)
T ss_dssp HHHCSSTTTSCCHHHHHTSGGGTSSSCCCC
T ss_pred HHccCChhhCcCHHHHhCCHhhCCCCCCCC
Confidence 999999999999999999999988877654
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-35 Score=285.78 Aligned_cols=264 Identities=15% Similarity=0.166 Sum_probs=175.0
Q ss_pred CHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 123 ~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
++++.|+-. +.||+|+||.||+|+++.+|+.||||++.......... ... .
T Consensus 7 ~i~d~Y~~~--~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~-------------------~~~--------~ 57 (293)
T d1jksa_ 7 NVDDYYDTG--EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR-------------------GVS--------R 57 (293)
T ss_dssp CGGGTEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSS-------------------SBC--------H
T ss_pred CcccCEEEe--EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhh-------------------hHH--------H
Confidence 456666665 67999999999999998899999999986431110000 000 0
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHH
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSL 281 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l 281 (487)
+. +.+|+..+.++ ++++|.--.-+.+..+..+||||||+|++|.++.... .........+..++..||
T Consensus 58 ~~------~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al 126 (293)
T d1jksa_ 58 ED------IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126 (293)
T ss_dssp HH------HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHhC-----CCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHH
Confidence 01 12222222222 1222111111123346678999999999999875432 223334455678888999
Q ss_pred HHHHHCCccccCCCCCCeEEcCCC----cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEG----KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g----~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
.|||+.|++|||+||+|||++.+| .+|++|||++..+...... ....+.+..++++....+..++++|+
T Consensus 127 ~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~-------~~~~~t~~y~APE~~~~~~~~~~~Di 199 (293)
T d1jksa_ 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-------KNIFGTPEFVAPEIVNYEPLGLEADM 199 (293)
T ss_dssp HHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBC-------SCCCCCGGGCCHHHHTTCCBCTHHHH
T ss_pred HhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccc-------cccCCCCcccCHHHHcCCCCCCcccc
Confidence 999999999999999999999776 4999999999877543211 01122344455555555667889999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++++ ..|+.+.+.......+.. .....|+.
T Consensus 200 wSlGvilyell~g--~~Pf~~~~~~~~~~~i~~----~~~~~~~~----------------------------------- 238 (293)
T d1jksa_ 200 WSIGVITYILLSG--ASPFLGDTKQETLANVSA----VNYEFEDE----------------------------------- 238 (293)
T ss_dssp HHHHHHHHHHHHS--SCSSCCSSHHHHHHHHHT----TCCCCCHH-----------------------------------
T ss_pred hhhhHHHHHHHcC--CCCCCCCCHHHHHHHHHh----cCCCCCch-----------------------------------
Confidence 9999999999985 356655554444433321 11111111
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.....++.+++.+.+||.+||.+|++..+.+.|+||.
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~ 275 (293)
T d1jksa_ 239 YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275 (293)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTC
T ss_pred hcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence 1124578899999999999999999999999999996
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-35 Score=284.79 Aligned_cols=256 Identities=14% Similarity=0.100 Sum_probs=162.6
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.. +.||+|+||+||+|+++.+|+.||||+++........ +.+.+..+.+....|+|++++++.
T Consensus 7 y~~~--~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~------~~~~~Ei~~l~~l~HpnIv~~~~~------- 71 (271)
T d1nvra_ 7 WDLV--QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINKMLNHENVVKFYGH------- 71 (271)
T ss_dssp EEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------CHHHHHHHHHTCCCTTBCCEEEE-------
T ss_pred eEEE--EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHH------HHHHHHHHHHHhCCCCCEeeEeee-------
Confidence 4444 7899999999999999989999999998643211100 000111111111224443333221
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
....+..+||||||+|++|.++.... .........+..++..|+.|||+
T Consensus 72 ------------------------------~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~ 121 (271)
T d1nvra_ 72 ------------------------------RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121 (271)
T ss_dssp ------------------------------EEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------eccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 12235678999999999998875322 22334455677899999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~Di~sl~~~l~ 365 (487)
+||+||||||+|||++.+|.+||+|||+++.+......... ....+++..++++++.. .+.+.++|+||+|+.++
T Consensus 122 ~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~----~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvily 197 (271)
T d1nvra_ 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 197 (271)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCB----CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHH
T ss_pred cCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccc----cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHH
Confidence 99999999999999999999999999999876433211000 00112333444444433 34456789999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++.. |+...+..... .. ...... +... .....+++
T Consensus 198 eml~G~~--pf~~~~~~~~~--~~-~~~~~~-------------------------~~~~------------~~~~~s~~ 235 (271)
T d1nvra_ 198 AMLAGEL--PWDQPSDSCQE--YS-DWKEKK-------------------------TYLN------------PWKKIDSA 235 (271)
T ss_dssp HHHHSSC--SCSSSSTTSHH--HH-HHHTTC-------------------------TTST------------TGGGSCHH
T ss_pred HHHhCCC--CCCCCChHHHH--HH-HHhcCC-------------------------CCCC------------ccccCCHH
Confidence 9998532 33222110000 00 000000 0000 01134788
Q ss_pred HHHHHHHHHhhcCcccccccchhhccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+++.+.+||.+||+.|++..+.+.|+||.
T Consensus 236 ~~~li~~~L~~dP~~R~t~~eil~hpwf~ 264 (271)
T d1nvra_ 236 PLALLHKILVENPSARITIPDIKKDRWYN 264 (271)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence 89999999999999999999999999996
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=2.8e-34 Score=276.05 Aligned_cols=253 Identities=15% Similarity=0.147 Sum_probs=161.1
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.. +.||+|+||+||+|+++.+|+.||||+++...... .+.+ .+.+..+.+....|+|++++++.
T Consensus 6 y~~~--~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~---~~~~E~~il~~l~HpnIv~~~~~------- 71 (269)
T d2java1 6 YEVL--YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQ---MLVSEVNLLRELKHPNIVRYYDR------- 71 (269)
T ss_dssp EEEE--EEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCH--HHHH---HHHHHHHHTTSCCCTTBCCEEEE-------
T ss_pred CEEe--EEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCH--HHHH---HHHHHHHHHHHCCCCCEeeEEEE-------
Confidence 4444 78999999999999999899999999987542211 1111 11111122222334444433321
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHHH---hcCCC--HHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIE---SQGLK--VLDLVNTGIQCSL 281 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~--~~~~~~~~i~~~l 281 (487)
+. +..+..++|||||+||+|.++.... ...++ ....+..+++.||
T Consensus 72 -----------------------------~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al 122 (269)
T d2java1 72 -----------------------------IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122 (269)
T ss_dssp -----------------------------EEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------EEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHH
Confidence 11 1234568999999999999875432 22344 3445668888999
Q ss_pred HHHHHCC-----ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 282 RQLLEYG-----YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 282 ~~lh~~g-----ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
.|+|+.| |+||||||+|||++.+|.+||+|||+++.+...... . ....+++..++++.+..+-.++++|
T Consensus 123 ~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~--~----~~~~gt~~Y~APE~l~~~~~~~~~D 196 (269)
T d2java1 123 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF--A----KAFVGTPYYMSPEQMNRMSYNEKSD 196 (269)
T ss_dssp HHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------------CCCSCCCHHHHTTCCCCHHHH
T ss_pred HHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCc--c----ccCCCCcccCCHHHHcCCCCChHHH
Confidence 9999976 999999999999999999999999999887654221 1 1112333444455555555688899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .|+...+...+...+.. . . . +.
T Consensus 197 IwSlGvilyel~tg~--~Pf~~~~~~~~~~~i~~---~-~-----------------------~-~~------------- 233 (269)
T d2java1 197 IWSLGCLLYELCALM--PPFTAFSQKELAGKIRE---G-K-----------------------F-RR------------- 233 (269)
T ss_dssp HHHHHHHHHHHHHSS--CSCCCSSHHHHHHHHHH---T-C-----------------------C-CC-------------
T ss_pred HHhhCHHHHHHhhCC--CCCCCCCHHHHHHHHHc---C-C-----------------------C-CC-------------
Confidence 999999999999843 46665554443322211 0 0 0 00
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhcccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLV 473 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~ 473 (487)
+....++++++.+.+||..||+.|++..+.+.|||.
T Consensus 234 -~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 234 -IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -CCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 011346788999999999999999999999999984
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.98 E-value=3.6e-34 Score=276.40 Aligned_cols=263 Identities=11% Similarity=0.075 Sum_probs=175.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++....... +. .-.....+. +.+
T Consensus 9 ~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~-----------------------~~-~~~~~~~~~------~~~ 58 (277)
T d1phka_ 9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF-----------------------SA-EEVQELREA------TLK 58 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTC-----------------------CH-HHHHHHHHH------HHH
T ss_pred eEEecCcCeEEEEEEECCCCCEEEEEEEecccccch-----------------------hH-HHHHHHHHH------HHH
Confidence 789999999999999988999999999864321110 00 000111122 334
Q ss_pred HHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
|+..+.++. .+++| .+-.+ .......|||||||+|++|.++.... ..+.+....+..|+..||.|||++|++|
T Consensus 59 E~~~l~~l~----~hpnIv~~~~~-~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivH 133 (277)
T d1phka_ 59 EVDILRKVS----GHPNIIQLKDT-YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 133 (277)
T ss_dssp HHHHHHHHT----TCTTBCCEEEE-EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhc----CCCCeEEEEee-cccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 444444443 23332 22222 23345679999999999999886432 2233455667788999999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcchHHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA-LDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||+||+|||++.+|.+||+|||+++.+++.... .....+..+..|+.+...... ....++++|+||+|+.+++++++
T Consensus 134 rDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g 211 (277)
T d1phka_ 134 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 211 (277)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCEECCTTCCB--CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred cccccceEEEcCCCCeEEccchheeEccCCCce--eeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccC
Confidence 999999999999999999999999887654221 111123345566666543321 12246778999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHH
Q 011399 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l 450 (487)
. .|+.+.+.......+... ....|.. .....++++++.+
T Consensus 212 ~--~Pf~~~~~~~~~~~i~~~----~~~~~~~-----------------------------------~~~~~s~~~~~li 250 (277)
T d1phka_ 212 S--PPFWHRKQMLMLRMIMSG----NYQFGSP-----------------------------------EWDDYSDTVKDLV 250 (277)
T ss_dssp S--CSSCCSSHHHHHHHHHHT----CCCCCTT-----------------------------------TGGGSCHHHHHHH
T ss_pred C--CCCCCCCHHHHHHHHHhC----CCCCCCc-----------------------------------ccccCCHHHHHHH
Confidence 3 466555543333222110 1111100 0124578999999
Q ss_pred HHHHhhcCcccccccchhhccccc
Q 011399 451 VELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 451 ~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+||.+||..||+..+.+.|+||.
T Consensus 251 ~~~L~~~p~~R~s~~eil~h~~~~ 274 (277)
T d1phka_ 251 SRFLVVQPQKRYTAEEALAHPFFQ 274 (277)
T ss_dssp HHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHccCChhHCcCHHHHHcCHHHH
Confidence 999999999999999999999995
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=3.3e-34 Score=281.87 Aligned_cols=246 Identities=14% Similarity=0.128 Sum_probs=162.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++...... ....+.+......+....|||++++++
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~----~~~~~~~~~E~~il~~l~HpnIv~~~~-------------- 71 (316)
T d1fota_ 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR----LKQVEHTNDERLMLSIVTHPFIIRMWG-------------- 71 (316)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHSCCBTTBCCEEE--------------
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEchHHccC----HHHHHHHHHHHHHHHhccCcChhheee--------------
Confidence 78999999999999998899999999986431110 000011111111111112333322222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-CCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
+.......++|||||+|+++......... .......+..++..|+.|+|++||+||
T Consensus 72 -----------------------~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHr 128 (316)
T d1fota_ 72 -----------------------TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 128 (316)
T ss_dssp -----------------------EEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred -----------------------eEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEcc
Confidence 12234667999999999998876443221 223344567889999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
||||+|||++.+|.+||+|||+++.+..... . ..+++..++++.+.-...++++|+||+|+.+++++++.
T Consensus 129 DiKp~NILl~~~g~vkL~DFG~a~~~~~~~~-~--------~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~- 198 (316)
T d1fota_ 129 DLKPENILLDKNGHIKITDFGFAKYVPDVTY-T--------LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY- 198 (316)
T ss_dssp CCCGGGEEECTTSCEEECCCSSCEECSSCBC-C--------CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSS-
T ss_pred ccCchheeEcCCCCEEEecCccceEeccccc-c--------ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCC-
Confidence 9999999999999999999999988754321 1 22344455555555555688999999999999999853
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
.|+.+.+...+...+.. .....| ...++++++.+.+
T Consensus 199 -~Pf~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~s~~~~~li~~ 234 (316)
T d1fota_ 199 -TPFYDSNTMKTYEKILN----AELRFP---------------------------------------PFFNEDVKDLLSR 234 (316)
T ss_dssp -CTTCCSSHHHHHHHHHH----CCCCCC---------------------------------------TTSCHHHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHc----CCCCCC---------------------------------------CCCCHHHHHHHHH
Confidence 45555554433322211 011111 1236778888889
Q ss_pred HHhhcCcccc-----cccchhhccccc
Q 011399 453 LLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
||.+||.+|+ +..+.+.|+||.
T Consensus 235 ~L~~dp~~R~~~~r~t~~~il~Hp~f~ 261 (316)
T d1fota_ 235 LITRDLSQRLGNLQNGTEDVKNHPWFK 261 (316)
T ss_dssp HTCSCTTTCTTSSTTTTHHHHTSGGGS
T ss_pred HhhhCHHhccccchhhHHHHHcCcccc
Confidence 9999998887 455677888884
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.98 E-value=1.2e-34 Score=290.48 Aligned_cols=253 Identities=14% Similarity=0.095 Sum_probs=163.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++.+|+.||||++.+.....-..+. .+..
T Consensus 10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~------------------------------------~~~~ 53 (364)
T d1omwa3 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET------------------------------------LALN 53 (364)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHH------------------------------------HHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHH------------------------------------HHHH
Confidence 6899999999999999989999999998632111000000 0111
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+..+. . .+++.|.--.-+....+..|+|||||+|++|.++..... ........+..+++.||.|+|++|++||
T Consensus 54 e~~~~~~l~-~-~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHr 131 (364)
T d1omwa3 54 ERIMLSLVS-T-GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 131 (364)
T ss_dssp HHHHHHHHS-S-SCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHHHh-c-CCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccce
Confidence 111111110 0 122222111112233466799999999999988754332 2233455667889999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHHHHh
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||||+|||++.+|.+||+|||+++.+........ .+++..++++++..+ ..++++|+||+|+.+++++++.
T Consensus 132 DlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~--------~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~ 203 (364)
T d1omwa3 132 DLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 203 (364)
T ss_dssp CCSGGGEEECSSSCEEECCCTTCEECSSSCCCSC--------CSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eeccceeEEcCCCcEEEeeeceeeecCCCccccc--------ccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCC
Confidence 9999999999999999999999988765422111 234455555555444 4688899999999999999854
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHH
Q 011399 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~ 451 (487)
.|+...+..... .+...... ..+.+ ....++++++.+.
T Consensus 204 --~Pf~~~~~~~~~-~~~~~~~~-------------------------~~~~~--------------~~~~s~~~~~li~ 241 (364)
T d1omwa3 204 --SPFRQHKTKDKH-EIDRMTLT-------------------------MAVEL--------------PDSFSPELRSLLE 241 (364)
T ss_dssp --CSSCSSCSSCHH-HHHHHSSS-------------------------CCCCC--------------CSSSCHHHHHHHH
T ss_pred --CCCCCCCHHHHH-HHHHhccc-------------------------CCCCC--------------CCCCCHHHHHHHH
Confidence 344332211100 01100000 00110 1235788999999
Q ss_pred HHHhhcCccccc-----ccchhhccccc
Q 011399 452 ELLFKDGRFRHV-----LYSPFTINLVD 474 (487)
Q Consensus 452 ~~L~~d~~~r~~-----~~~~~~~~~~~ 474 (487)
+||.+||++|++ +.+.+.|+||.
T Consensus 242 ~~L~~dP~~R~t~~~~~a~eil~Hp~f~ 269 (364)
T d1omwa3 242 GLLQRDVNRRLGCLGRGAQEVKESPFFR 269 (364)
T ss_dssp HHTCSSTTTSTTTSSSTHHHHHTSGGGT
T ss_pred HHcccCHHHhCCCcccCHHHHHcCcccc
Confidence 999999999999 46788999994
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=2.5e-34 Score=284.90 Aligned_cols=253 Identities=15% Similarity=0.144 Sum_probs=167.1
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|+||+||+|+++.+|+.||||+++...... ... .+.
T Consensus 7 y~~~--~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~----------------------~~~--------~~~--- 51 (337)
T d1o6la_ 7 FDYL--KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----------------------KDE--------VAH--- 51 (337)
T ss_dssp EEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----------------------TTC--------HHH---
T ss_pred cEEE--EEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC----------------------HHH--------HHH---
Confidence 4444 78999999999999999899999999986321100 000 001
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
+.+|...+.++ +++.|.--.-+.......|+|||||+||+|.++..... ..++....+..++..||.|+|+
T Consensus 52 ---~~~E~~il~~l-----~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~ 123 (337)
T d1o6la_ 52 ---TVTESRVLQNT-----RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123 (337)
T ss_dssp ---HHHHHHHHHSC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhC-----CCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhh
Confidence 11222222211 12222111112233456789999999999988754322 2334566777899999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
+||+||||||+|||++.+|.+||+|||+++.+...... .....+++..+++++..-.-.++++|+||+|+.+++
T Consensus 124 ~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~------~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilye 197 (337)
T d1o6la_ 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197 (337)
T ss_dssp TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC------BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHH
T ss_pred cCccccccCHHHeEecCCCCEEEeecccccccccCCcc------cccceeCHHHhhhhhccCCCCChhhcccchhhHHHH
Confidence 99999999999999999999999999999876432110 001123444455555544445889999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
|+++. .|+...+...+...+. ......| ...++++
T Consensus 198 ml~G~--~pf~~~~~~~~~~~i~----~~~~~~p---------------------------------------~~~s~~~ 232 (337)
T d1o6la_ 198 MMCGR--LPFYNQDHERLFELIL----MEEIRFP---------------------------------------RTLSPEA 232 (337)
T ss_dssp HHHSS--CSSCCSSHHHHHHHHH----HCCCCCC---------------------------------------TTSCHHH
T ss_pred HHHCC--CCCCCcCHHHHHHHHh----cCCCCCC---------------------------------------ccCCHHH
Confidence 99853 4555555443332211 1111111 1347888
Q ss_pred HHHHHHHHhhcCccccc-----ccchhhccccc
Q 011399 447 RDALVELLFKDGRFRHV-----LYSPFTINLVD 474 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~-----~~~~~~~~~~~ 474 (487)
++.+.+||.+||..|++ ..+.+.|+||.
T Consensus 233 ~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~ 265 (337)
T d1o6la_ 233 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265 (337)
T ss_dssp HHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred HHHHHhhccCCchhhcccccccHHHHHcCcccc
Confidence 89999999999999986 45678899984
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.98 E-value=2.8e-34 Score=286.16 Aligned_cols=251 Identities=17% Similarity=0.162 Sum_probs=168.0
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||++....... .+.+... +..+....|+|++++++
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~----~~~~~~E---~~il~~l~HpnIv~~~~-------------- 90 (350)
T d1koaa2 32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD----KETVRKE---IQTMSVLRHPTLVNLHD-------------- 90 (350)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHH----HHHHHHH---HHHHHHTCCTTBCCEEE--------------
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEcccchhh----HHHHHHH---HHHHHhCCCCCCCcEEE--------------
Confidence 67999999999999999899999999987542221 1111111 11111112333333322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc--CCCHHHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--GLKVLDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~~~~~~~~i~~~l~~lh~~givH 291 (487)
+ .+..+..|||||||+||+|.+....... .......+..++..||.|||++|++|
T Consensus 91 ----------------------~-~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiH 147 (350)
T d1koaa2 91 ----------------------A-FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 147 (350)
T ss_dssp ----------------------E-EEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ----------------------E-EEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 1 1234667899999999999877432322 33445566788999999999999999
Q ss_pred cCCCCCCeEEcC--CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATP--EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~--~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|||||+|||++. +|.+||+|||+++.++...... ...+++..++++++.-.-.+.++|+||+|+.+++|++
T Consensus 148 rDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~-------~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~ 220 (350)
T d1koaa2 148 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-------VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 220 (350)
T ss_dssp CCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE-------EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHH
T ss_pred eeechhHeeeccCCCCeEEEeecchheecccccccc-------eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHh
Confidence 999999999964 5789999999998876542110 0112333344444444445778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .|+...+....+..+... ....|+. .....++++++.
T Consensus 221 G~--~Pf~~~~~~~~~~~i~~~----~~~~~~~-----------------------------------~~~~~s~~~~~l 259 (350)
T d1koaa2 221 GL--SPFGGENDDETLRNVKSC----DWNMDDS-----------------------------------AFSGISEDGKDF 259 (350)
T ss_dssp SS--CSSCCSSHHHHHHHHHHT----CCCSCCG-----------------------------------GGGGCCHHHHHH
T ss_pred CC--CCCCCCCHHHHHHHHHhC----CCCCCcc-----------------------------------cccCCCHHHHHH
Confidence 53 455555544433333211 1111110 112357889999
Q ss_pred HHHHHhhcCcccccccchhhccccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDFE 476 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~~ 476 (487)
+.+||.+||++|++..+.+.|+||...
T Consensus 260 i~~~L~~dP~~R~t~~eil~hp~~~~~ 286 (350)
T d1koaa2 260 IRKLLLADPNTRMTIHQALEHPWLTPG 286 (350)
T ss_dssp HHHHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred HHHHccCChhHCcCHHHHhcCcccCCC
Confidence 999999999999999999999999644
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=8.5e-34 Score=282.75 Aligned_cols=250 Identities=17% Similarity=0.131 Sum_probs=166.3
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|+||+||+|+++.+|+.||||++...... +...+. .
T Consensus 43 y~i~--~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~----~~~~~~--------------------------~--- 87 (350)
T d1rdqe_ 43 FDRI--KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV----KLKQIE--------------------------H--- 87 (350)
T ss_dssp EEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH----HTTCHH--------------------------H---
T ss_pred eEEE--EEeecCcCcEEEEEEECCCCCEEEEEEEchHHcc----CHHHHH--------------------------H---
Confidence 5555 7899999999999999989999999998632111 000000 1
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
+.+|.+.+.++ ++++|.--.-+.......++||||+.|++|.+..... .........+..++..||.|||+
T Consensus 88 ---~~~E~~il~~l-----~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~ 159 (350)
T d1rdqe_ 88 ---TLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159 (350)
T ss_dssp ---HHHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHc-----CCCcEeecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 12222222211 2232211111223345678999999999998764332 22333455677889999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
+||+||||||+|||++.+|.+||+|||+++.+..... ...+.+..++++++.-...++++|+||+|+.+++
T Consensus 160 ~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~---------~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilye 230 (350)
T d1rdqe_ 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230 (350)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC---------CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred CCEecCcCCHHHcccCCCCCEEeeeceeeeecccccc---------cccCccccCCHHHHcCCCCCccccccchhHHHHH
Confidence 9999999999999999999999999999998764321 1234455555655555556888999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++. .|+...+...+...+.. .....| ...++++
T Consensus 231 mltG~--~Pf~~~~~~~~~~~i~~----~~~~~p---------------------------------------~~~s~~~ 265 (350)
T d1rdqe_ 231 MAAGY--PPFFADQPIQIYEKIVS----GKVRFP---------------------------------------SHFSSDL 265 (350)
T ss_dssp HHHSS--CSSCCSSHHHHHHHHHH----CCCCCC---------------------------------------TTCCHHH
T ss_pred HHhCC--CCCCCcCHHHHHHHHhc----CCCCCC---------------------------------------ccCCHHH
Confidence 99854 45555554333332211 111111 1246778
Q ss_pred HHHHHHHHhhcCcccc-----cccchhhccccc
Q 011399 447 RDALVELLFKDGRFRH-----VLYSPFTINLVD 474 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~-----~~~~~~~~~~~~ 474 (487)
++.+.+||.+||.+|+ +..+.+.|+||.
T Consensus 266 ~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~ 298 (350)
T d1rdqe_ 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred HHHHHHHhhhCHHhccccccccHHHHHcCcccc
Confidence 8888888888888885 566777888883
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.4e-34 Score=275.50 Aligned_cols=259 Identities=17% Similarity=0.118 Sum_probs=166.7
Q ss_pred CCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 122 ~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
...+..|-.|+ +.||+|+||.||+|+++.+|+.||||++....... .+.+. +.+.++.+....|+|++++++.
T Consensus 4 ~~~~gry~~~~-~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~--~~~~~---~~~E~~il~~l~HpnIv~~~~~- 76 (270)
T d1t4ha_ 4 MSNDGRFLKFD-IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SERQR---FKEEAEMLKGLQHPNIVRFYDS- 76 (270)
T ss_dssp ECTTSCEEEEE-EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHHHH---HHHHHHHHTTCCCTTBCCEEEE-
T ss_pred cCCCCCEEEee-eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH--HHHHH---HHHHHHHHHhCCCCCeeeEEEE-
Confidence 33444455554 46999999999999999899999999986431110 11111 1111111122234444433321
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeec---CCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD---YTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGI 277 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~---~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i 277 (487)
+.. .....++|||||+|++|.++.... ....+....+..++
T Consensus 77 -----------------------------------~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi 121 (270)
T d1t4ha_ 77 -----------------------------------WESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQI 121 (270)
T ss_dssp -----------------------------------EEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred -----------------------------------EeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHH
Confidence 111 123358999999999998875432 12233344567889
Q ss_pred HHHHHHHHHCC--ccccCCCCCCeEEc-CCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 011399 278 QCSLRQLLEYG--YFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (487)
Q Consensus 278 ~~~l~~lh~~g--ivH~Dlkp~Nili~-~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (487)
+.||.|||++| |+||||||+|||++ ++|.+||+|||+++..........+| ++..++++++. +-.+++
T Consensus 122 ~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~G--------T~~Y~aPE~~~-~~~~~~ 192 (270)
T d1t4ha_ 122 LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIG--------TPEFMAPEMYE-EKYDES 192 (270)
T ss_dssp HHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCS--------SCCCCCGGGGG-TCCCTH
T ss_pred HHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCccc--------CccccCHHHhC-CCCCCc
Confidence 99999999999 99999999999997 58999999999998665442222222 23333333443 335888
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcCc-HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHH
Q 011399 355 VDVTPIVPALRNFFDDALNSSVSELN-FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPY 433 (487)
Q Consensus 355 ~Di~sl~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~ 433 (487)
+|+||+|+.+++++++. .|+.+.+ ...+...+ . ....|.
T Consensus 193 ~DIwSlGvilyel~~g~--~Pf~~~~~~~~~~~~i----~------------------------~~~~~~---------- 232 (270)
T d1t4ha_ 193 VDVYAFGMCMLEMATSE--YPYSECQNAAQIYRRV----T------------------------SGVKPA---------- 232 (270)
T ss_dssp HHHHHHHHHHHHHHHSS--CTTTTCSSHHHHHHHH----T------------------------TTCCCG----------
T ss_pred CchhhHHHHHHHHHHCC--CCCCCcccHHHHHHHH----H------------------------cCCCCc----------
Confidence 99999999999999853 3443322 22211111 0 000000
Q ss_pred HHHHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 434 FAKRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 434 ~~~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
......+|++++.+.+||.+||+.|++..+.+.|+||+
T Consensus 233 ---~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 233 ---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp ---GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred ---ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 01124578899999999999999999999999999995
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-33 Score=277.73 Aligned_cols=250 Identities=17% Similarity=0.147 Sum_probs=167.5
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++++.... + ..... +..
T Consensus 8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~---~-------------------~~~~~--------------~~~ 51 (320)
T d1xjda_ 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM---D-------------------DDVEC--------------TMV 51 (320)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH---T-------------------TCHHH--------------HHH
T ss_pred eEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC---h-------------------HHHHH--------------HHH
Confidence 78999999999999999999999999997431110 0 00000 011
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~givH~ 292 (487)
|...+. .. -++++|.--.-+.......||||||++||+|.++.... ..+.+....+..+++.||.|||++|++||
T Consensus 52 e~~~l~---~~-~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHr 127 (320)
T d1xjda_ 52 EKRVLS---LA-WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 127 (320)
T ss_dssp HHHHHH---HH-TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHH---Hh-CCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 111100 01 12232211111223346679999999999999875432 22334556677889999999999999999
Q ss_pred CCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 011399 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (487)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~ 372 (487)
|+||+|||++++|.+||+|||+++.+....... ....+.+..+++++...+..++++|+||+||.+++++++
T Consensus 128 Dikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG-- 199 (320)
T d1xjda_ 128 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKT------NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG-- 199 (320)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB------CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS--
T ss_pred cCcccceeecCCCceeccccchhhhcccccccc------cccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhC--
Confidence 999999999999999999999998764321100 111233444555555566678899999999999999984
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHHHHH
Q 011399 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 452 (487)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~l~~ 452 (487)
..|+.+.+...+...+.. -.|.+. ...++++++.+.+
T Consensus 200 ~~PF~~~~~~~~~~~i~~-----------------------------~~~~~p--------------~~~s~~~~dli~~ 236 (320)
T d1xjda_ 200 QSPFHGQDEEELFHSIRM-----------------------------DNPFYP--------------RWLEKEAKDLLVK 236 (320)
T ss_dssp SCSSCCSSHHHHHHHHHH-----------------------------CCCCCC--------------TTSCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHc-----------------------------CCCCCC--------------ccCCHHHHHHHHH
Confidence 356665554443322210 111111 1347889999999
Q ss_pred HHhhcCccccccc-chhhccccc
Q 011399 453 LLFKDGRFRHVLY-SPFTINLVD 474 (487)
Q Consensus 453 ~L~~d~~~r~~~~-~~~~~~~~~ 474 (487)
||.+||..|++.. +-+.|+||.
T Consensus 237 ~L~~dP~~R~s~~~~l~~hpff~ 259 (320)
T d1xjda_ 237 LFVREPEKRLGVRGDIRQHPLFR 259 (320)
T ss_dssp HSCSSGGGSBTTBSCGGGSGGGT
T ss_pred hcccCCCCCcCHHHHHHhCchhc
Confidence 9999999999985 677899994
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.3e-34 Score=282.53 Aligned_cols=249 Identities=12% Similarity=0.150 Sum_probs=167.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++....+.. .+.+++. .+....|+|++++++
T Consensus 11 ~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~----~~~~Ei~----il~~l~HpnIv~~~~-------------- 68 (321)
T d1tkia_ 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV----LVKKEIS----ILNIARHRNILHLHE-------------- 68 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHH----HHHHHHH----HHHHSCCTTBCCEEE--------------
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHH----HHHHHHH----HHHhCCCCCCCeEEE--------------
Confidence 689999999999999998999999999976532210 0011110 001112333333222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
+ .+..+..|||||||+|++|.+........++. ...+..++..|+.|||++||+|
T Consensus 69 ----------------------~-~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiH 125 (321)
T d1tkia_ 69 ----------------------S-FESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125 (321)
T ss_dssp ----------------------E-EEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ----------------------E-EEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 1 22346679999999999998874333223444 4456688999999999999999
Q ss_pred cCCCCCCeEEcCC--CcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 292 ADPHPGNLLATPE--GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 292 ~Dlkp~Nili~~~--g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
|||||+|||++.+ +.++|+|||++......... ....+.+..++++...-...++++|+||+|+.++++++
T Consensus 126 rDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~-------~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~ 198 (321)
T d1tkia_ 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF-------RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS 198 (321)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE-------EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH
T ss_pred ccccccceeecCCCceEEEEcccchhhccccCCcc-------cccccccccccchhccCCCCCchhhcccHHHHHHHHHh
Confidence 9999999999854 47999999999877543210 01122344445555555556788999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+. .|+...+...+...+.. .....|. ......++++++.
T Consensus 199 G~--~Pf~~~~~~~~~~~i~~----~~~~~~~-----------------------------------~~~~~~s~~~~~l 237 (321)
T d1tkia_ 199 GI--NPFLAETNQQIIENIMN----AEYTFDE-----------------------------------EAFKEISIEAMDF 237 (321)
T ss_dssp SS--CTTCCSSHHHHHHHHHH----TCCCCCH-----------------------------------HHHTTSCHHHHHH
T ss_pred CC--CCCCCCCHHHHHHHHHh----CCCCCCh-----------------------------------hhccCCCHHHHHH
Confidence 53 45555554433333211 1111111 1112457889999
Q ss_pred HHHHHhhcCcccccccchhhcccccc
Q 011399 450 LVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+||.+||+.|++..+.+.|+||.-
T Consensus 238 i~~~L~~dp~~R~s~~eil~hp~~~~ 263 (321)
T d1tkia_ 238 VDRLLVKERKSRMTASEALQHPWLKQ 263 (321)
T ss_dssp HHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred HHHHccCChhHCcCHHHHhcCHhhcc
Confidence 99999999999999999999999953
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-32 Score=273.74 Aligned_cols=291 Identities=20% Similarity=0.250 Sum_probs=172.6
Q ss_pred HHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 124 ~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
+.+.|+.+ +.||+|+||.||+|+++.+|+.||||+++......... -..++++ +.+....|+|++++.+.+.
T Consensus 16 ~~~~Y~~i--~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~-~~~~~Ei----~il~~l~hpniv~l~~~~~- 87 (346)
T d1cm8a_ 16 VRAVYRDL--QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA-KRAYREL----RLLKHMRHENVIGLLDVFT- 87 (346)
T ss_dssp CBSSEEEE--EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHH-HHHHHHH----HHHHHCCBTTBCCCSEEEC-
T ss_pred cCCcEEEE--EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHH-HHHHHHH----HHHHhcCCCCeeEEEEEec-
Confidence 44556666 78999999999999999899999999997542211000 0011111 1111112333333322110
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (487)
..-........++||||+ |.++..+.............+..++..||.|
T Consensus 88 ------------------------------~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~ 136 (346)
T d1cm8a_ 88 ------------------------------PDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRY 136 (346)
T ss_dssp ------------------------------SCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------cCccccccceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 000001123468999999 5566665433333344455677889999999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
||++||+||||||+|||++.+|.++++|||++...+.... ....+..+..||.+ ......+.++|+||+|+.
T Consensus 137 LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~----~~~~t~~y~aPE~~----~~~~~~~~~~DiwSlGvi 208 (346)
T d1cm8a_ 137 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT----GYVVTRWYRAPEVI----LNWMRYTQTVDIWSVGCI 208 (346)
T ss_dssp HHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC----SSCSCGGGCCTHHH----HTTTCCCTTHHHHHHHHH
T ss_pred HHhCCCcccccCcchhhcccccccccccccceeccCCccc----cccccccccCHHHH----cCCCCCCccchhhcchHH
Confidence 9999999999999999999999999999999998765421 11122334455543 234466889999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++. .|+...+....+..+...... .|..+........ ...... ..|..... + ........+
T Consensus 209 l~ell~g~--~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~-~~~~~~~~----~--~~~~~~~~s 274 (346)
T d1cm8a_ 209 MAEMITGK--TLFKGSDHLDQLKEIMKVTGT----PPAEFVQRLQSDE-AKNYMK-GLPELEKK----D--FASILTNAS 274 (346)
T ss_dssp HHHHHHSS--CSSCCSSHHHHHHHHHHHHCC----CCHHHHHTCSCHH-HHHHHH-HSCCCCCC----C--GGGTCTTCC
T ss_pred HHHHHHCc--CCCCCCChHHHHHHHHhccCC----CcHHHHhhhcchh-hhhhhc-cCCccccc----c--hHHhccCCC
Confidence 99999853 455555555555444443321 2222211000000 000001 11111100 0 012234568
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+.+++.+.+||..||.+|++..+.+.||||+-
T Consensus 275 ~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~ 306 (346)
T d1cm8a_ 275 PLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 306 (346)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred HHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence 99999999999999999999999999999964
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.5e-33 Score=274.26 Aligned_cols=295 Identities=17% Similarity=0.145 Sum_probs=174.7
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|+||+||+|+++.+|+.||||+++...... . ....
T Consensus 12 Y~i~--~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-----------------------~--------~~~~--- 55 (318)
T d3blha1 12 YEKL--AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-----------------------G--------FPIT--- 55 (318)
T ss_dssp EEEE--EEEEECSSSEEEEEEETTTCCEEEEEEC----CTT-----------------------S--------SCHH---
T ss_pred EEEE--EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch-----------------------H--------HHHH---
Confidence 5555 78999999999999998899999999975321100 0 0001
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeee-------cCCCCceEEEeecCCCCcCcHHHH-HhcCCCHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFW-------DYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQC 279 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~-------~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~ 279 (487)
+.+|...+.++ .+...+.+..++. ......++||||++++.+...... ..........+..++..
T Consensus 56 ---~~~E~~il~~l----~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~ 128 (318)
T d3blha1 56 ---ALREIKILQLL----KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 128 (318)
T ss_dssp ---HHHHHHHHHHC----CCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHh----cCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHH
Confidence 11122222221 1111112222221 112456899999988766433111 11223345566788999
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHH---HHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI---IGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
|+.|+|+.||+||||||+|||++.+|.++++|||++..+........ .+...+..+..||.+. .....++++|
T Consensus 129 ~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~----~~~~~~~k~D 204 (318)
T d3blha1 129 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLL----GERDYGPPID 204 (318)
T ss_dssp HHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHT----TCSSCCTHHH
T ss_pred HHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHc----CCCCCCcHHH
Confidence 99999999999999999999999999999999999987754322110 0011233445555432 1224578899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 436 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~ 436 (487)
+||+|+.+++++++. .++...+.......+................ .....+.......+.... .+.+..
T Consensus 205 iwSlGvil~el~~g~--~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~ 274 (318)
T d3blha1 205 LWGAGCIMAEMWTRS--PIMQGNTEQHQLALISQLCGSITPEVWPNVD----NYELYEKLELVKGQKRKV----KDRLKA 274 (318)
T ss_dssp HHHHHHHHHHHHHSS--CSCCCSSHHHHHHHHHHHHCCCCTTTSTTCC----CC-------CCSSCCBCH----HHHHHH
T ss_pred cccCCceeeeHhhCC--CCCCCCCHHHHHHHHHHhcCCCChhhccccc----hhhhhhhhcccccccccc----hhhhcc
Confidence 999999999999853 4555555444444444443322211111100 000000000001111111 111111
Q ss_pred HhccCCCHHHHHHHHHHHhhcCcccccccchhhccccccccccccc
Q 011399 437 RLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCDI 482 (487)
Q Consensus 437 ~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~ 482 (487)
...++.+++.+.+||..||++|++..+.+.||||..+++|.|+
T Consensus 275 ---~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~p~~~ 317 (318)
T d3blha1 275 ---YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDL 317 (318)
T ss_dssp ---HHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSCCCCC
T ss_pred ---ccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCCCCCCC
Confidence 1347899999999999999999999999999999999999987
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.97 E-value=1e-32 Score=272.90 Aligned_cols=279 Identities=15% Similarity=0.154 Sum_probs=171.4
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|+||+||+|+++.+|+.||||++++...+.+..++.+|+.+. .|+|++.++
T Consensus 37 y~i~--~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~---------~hpnIv~~~--------- 96 (328)
T d3bqca1 37 YQLV--RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR---------GGPNIITLA--------- 96 (328)
T ss_dssp EEEE--EEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHT---------TSTTBCCEE---------
T ss_pred eEEE--EEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhcc---------CCCCCcEEE---------
Confidence 4444 78999999999999998899999999998664443333332222211 022222211
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeee-cCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
.++. ......++|||||+|++|... .+.........+..++..||.|||+
T Consensus 97 ---------------------------~~~~~~~~~~~~~v~e~~~~~~L~~~--~~~l~e~~i~~i~~qil~aL~~LH~ 147 (328)
T d3bqca1 97 ---------------------------DIVKDPVSRTPALVFEHVNNTDFKQL--YQTLTDYDIRFYMYEILKALDYCHS 147 (328)
T ss_dssp ---------------------------EEEECTTTCSEEEEEECCCSCBGGGT--TTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------EEEEecCCCceeEEEeecCCCcHHHH--hcCCCHHHHHHHHHHHHHHHHHHhh
Confidence 1221 223457899999999999776 3344455567778999999999999
Q ss_pred CCccccCCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
+||+|||+||+|||++.++ .++|+|||++..+.+.... .....+..+..||... .....+.++|+||+|+.++
T Consensus 148 ~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~--~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~~l~ 221 (328)
T d3bqca1 148 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY--NVRVASRYFKGPELLV----DYQMYDYSLDMWSLGCMLA 221 (328)
T ss_dssp TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCC--CSCCSCGGGCCHHHHT----TCCCCCTHHHHHHHHHHHH
T ss_pred cccccccccccceEEcCCCCeeeecccccceeccCCCcc--cccccCccccCccccc----CCCCCCcccchhhhhhhhH
Confidence 9999999999999998655 6999999999876543211 1111123445555431 1223577899999999999
Q ss_pred HHHHHhccCCCCcC-cHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHH------hHhHHHHHHh
Q 011399 366 NFFDDALNSSVSEL-NFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA------ASYPYFAKRL 438 (487)
Q Consensus 366 ~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~------~~~p~~~~~l 438 (487)
+++.+.. |+... +.......+...+. .|...... .......++.+.... ....+.....
T Consensus 222 e~~~g~~--pf~~~~~~~~~~~~i~~~~g-----~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (328)
T d3bqca1 222 SMIFRKE--PFFHGHDNYDQLVRIAKVLG-----TEDLYDYI-------DKYNIELDPRFNDILGRHSRKRWERFVHSEN 287 (328)
T ss_dssp HHHHTCS--SSSCCSSHHHHHHHHHHHHC-----HHHHHHHH-------HHTTCCCCGGGGGTCCCCCCCCGGGGCCTTT
T ss_pred HhccCCC--CCCCCchhHHHHHHHHHHHC-----Cchhhhhh-------hhcccccCcccchhcccccccchhhcccccc
Confidence 9998543 33221 11112222222111 11110000 001111111111000 0000111111
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
....++++++.+.+||..||++|++..+.+.||||..
T Consensus 288 ~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~ 324 (328)
T d3bqca1 288 QHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324 (328)
T ss_dssp GGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 2246789999999999999999999999999999953
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.97 E-value=3.2e-33 Score=271.21 Aligned_cols=281 Identities=18% Similarity=0.148 Sum_probs=174.2
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|+||.||+|+++ +|+.||||+++...... .....+.+.+..+....|+|++.+++
T Consensus 4 Y~~~--~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~~~~-------- 67 (286)
T d1ob3a_ 4 YHGL--EKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDE-----GIPSTTIREISILKELKHSNIVKLYD-------- 67 (286)
T ss_dssp EEEE--EEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGG-----CCCHHHHHHHHGGGGCCCTTBCCEEE--------
T ss_pred ceec--cEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcCh-----HHHHHHHHHHHHHHhCCCCcEEeeee--------
Confidence 5555 78999999999999997 89999999986442111 00000111111111122333332221
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (487)
.....+..+++|||+.|+.+..+.... .........+..++..||+|+|+
T Consensus 68 -----------------------------~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~ 118 (286)
T d1ob3a_ 68 -----------------------------VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118 (286)
T ss_dssp -----------------------------EEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------ecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhcc
Confidence 233456778999999987766553211 12334455667889999999999
Q ss_pred CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 287 ~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
.||+||||||+|||++.+|.+|++|||++......... .........+..|+.+ ......++++|+||+|+.+++
T Consensus 119 ~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~y~~pE~~----~~~~~~~~~~DiwslGv~l~e 193 (286)
T d1ob3a_ 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-YTHEIVTLWYRAPDVL----MGSKKYSTTIDIWSVGCIFAE 193 (286)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHH----TTCCSCCTHHHHHHHHHHHHH
T ss_pred CcEEecCCCCceeeEcCCCCEEecccccceecccCccc-cceecccchhhhHHHH----hCCCCCCcceeehhcCcHHHH
Confidence 99999999999999999999999999998765433211 1111112233444433 234566889999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
++++. .|+.+.+....+..+............+..... ...++.+..... .| ........++.+
T Consensus 194 l~~G~--~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~~--~~~~~~~~s~~~ 257 (286)
T d1ob3a_ 194 MVNGT--PLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL-----------PKYDPNFTVYEP-LP--WESFLKGLDESG 257 (286)
T ss_dssp HHHSS--CSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS-----------TTCCTTCCCCCC-CC--GGGTCCSCCHHH
T ss_pred HHHCC--CCCCCCCHHHHHHHHHHhhCCCChhhccchhhh-----------hhcccccccccC-cc--hhhhcccCCHHH
Confidence 99853 566666655555554444332221111111000 011111111110 11 122344678999
Q ss_pred HHHHHHHHhhcCcccccccchhhccccc
Q 011399 447 RDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
++.+.+||..||++|++..+.+.|+||.
T Consensus 258 ~dli~~~L~~dP~~R~s~~ell~Hp~f~ 285 (286)
T d1ob3a_ 258 IDLLSKMLKLDPNQRITAKQALEHAYFK 285 (286)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred HHHHHHHccCChhHCcCHHHHhcCcccC
Confidence 9999999999999999999999999996
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.1e-33 Score=272.09 Aligned_cols=287 Identities=18% Similarity=0.147 Sum_probs=171.2
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|+||+||+|+++.+|+.||||+++......- ....+.+..+.+....|++++++.+
T Consensus 4 Y~~~--~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~-----~~~~~~~Ei~il~~l~Hp~Iv~~~~-------- 68 (298)
T d1gz8a_ 4 FQKV--EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-----VPSTAIREISLLKELNHPNIVKLLD-------- 68 (298)
T ss_dssp EEEE--EEEEECSSSEEEEEEETTTCCEEEEEEEC------------CCHHHHHHHHHHTTCCCTTBCCEEE--------
T ss_pred CEec--cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChH-----HHHHHHHHHHHHHhCCCCcEEEecc--------
Confidence 4444 679999999999999988999999999864321100 0000000001111112333332222
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCC--HHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh 285 (487)
++...+..|+||||+.|+.+.........+++ ....+..++..||.|||
T Consensus 69 -----------------------------~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH 119 (298)
T d1gz8a_ 69 -----------------------------VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119 (298)
T ss_dssp -----------------------------EEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------ccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh
Confidence 12334667999999988655443222233344 44566788999999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
+.||+||||||+|||++.++.+||+|||+++........ ......+..+..||.. ...++.+.++|+||+|+.++
T Consensus 120 ~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~-~~~~~gt~~y~apE~~----~~~~~~~~~~DiwSlGvily 194 (298)
T d1gz8a_ 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT-YTHEVVTLWYRAPEIL----LGCKYYSTAVDIWSLGCIFA 194 (298)
T ss_dssp HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC-TTCCBCCCTTCCHHHH----TTCSSCCTHHHHHHHHHHHH
T ss_pred cCCEEccccCchheeecccCcceeccCCcceeccCCccc-ceeecccceeeehhhh----ccccCCCccccccccchhhh
Confidence 999999999999999999999999999988654322100 0001112223333332 23455678899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
+++++. .|+...+-...+..+............+... .. ....+.+.... ..++ .......+++
T Consensus 195 ~m~~G~--~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~-~~~~--~~~~~~~s~~ 258 (298)
T d1gz8a_ 195 EMVTRR--ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT----SM-------PDYKPSFPKWA-RQDF--SKVVPPLDED 258 (298)
T ss_dssp HHHHSS--CSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG----GS-------TTCCTTSCCCC-CCCH--HHHSTTCCHH
T ss_pred HHhhCC--CCCCCCCHHHHHHHHHHhcCCCchhhccccc----cc-------ccccccccccc-ccch--hhhccCCCHH
Confidence 999854 4565555444444444333221111111100 00 00011110000 0111 1233357899
Q ss_pred HHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 446 LRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
+++.+.+||..||++||+..+.+.|+||+--..|
T Consensus 259 ~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p 292 (298)
T d1gz8a_ 259 GRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292 (298)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred HHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence 9999999999999999999999999999644333
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.97 E-value=6.3e-32 Score=260.79 Aligned_cols=259 Identities=18% Similarity=0.146 Sum_probs=164.3
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|+-. +.||+|+||.||+|+++.+|+.||||++++.....-. .. ..
T Consensus 7 drY~i~--~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~----~~--------------------------~~- 53 (277)
T d1o6ya_ 7 DRYELG--EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPS----FY--------------------------LR- 53 (277)
T ss_dssp TTEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHH----HH--------------------------HH-
T ss_pred ceeEEe--EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHH----HH--------------------------HH-
Confidence 445444 7899999999999999889999999999765322110 00 11
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCe-EeceeeecC---CCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDV-LVPDIFWDY---TSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQC 279 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~---~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~ 279 (487)
+.+|.+.+.++ +++++ .+-.++... ....|||||||+|++|.+..... ...+. ...+..+++.
T Consensus 54 -----~~~E~~~l~~~-----~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~-~~l~~~~~~~i~~qi~~ 122 (277)
T d1o6ya_ 54 -----FRREAQNAAAL-----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQ 122 (277)
T ss_dssp -----HHHHHHHHHTC-----CCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhc-----CCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhccc-CCCCHHHHHHHHHHHHH
Confidence 22222222211 12211 111112111 12368999999999998764332 23443 4456688999
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
|+.|+|++|++||||||+|||++.++.++++|||.+........ ........+..+..|| .+.-+..++++|+
T Consensus 123 al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE-----~~~~~~~~~~~Di 197 (277)
T d1o6ya_ 123 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-----QARGDSVDARSDV 197 (277)
T ss_dssp HHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHH-----HHTTCCCCHHHHH
T ss_pred HHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHH-----HHcCCCCCcceec
Confidence 99999999999999999999999999999999999876644321 1112222233444444 4444556888999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKR 437 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~ 437 (487)
||+|+.+++++++. .|+...+........ +.. +|.. ...
T Consensus 198 wSlGvilyelltG~--~Pf~~~~~~~~~~~~---~~~--------------------------~~~~----------~~~ 236 (277)
T d1o6ya_ 198 YSLGCVLYEVLTGE--PPFTGDSPVSVAYQH---VRE--------------------------DPIP----------PSA 236 (277)
T ss_dssp HHHHHHHHHHHHSS--CSCCCSSHHHHHHHH---HHC--------------------------CCCC----------GGG
T ss_pred ccchHHHHHHHhCC--CCCCCcCHHHHHHHH---Hhc--------------------------CCCC----------Cch
Confidence 99999999999853 455555433332221 111 1110 011
Q ss_pred hccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 438 LLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 438 l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
...+.++++++.+.+||.+||..|++..+.+.+.|..
T Consensus 237 ~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 237 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp TSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred hccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 1234678899999999999999999888888887764
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=6.3e-33 Score=269.09 Aligned_cols=185 Identities=18% Similarity=0.154 Sum_probs=127.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH--HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE--AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~--~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~ 211 (487)
+.||+|+||+||+|+++.+|+.||||+++.+... .+..+++++ ....|+|++++++
T Consensus 23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il----------~~l~HpnIv~~~~------------ 80 (287)
T d1opja_ 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----------KEIKHPNLVQLLG------------ 80 (287)
T ss_dssp EETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHH----------HHCCCTTBCCEEE------------
T ss_pred eEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHH----------HhCCCCCEecCCc------------
Confidence 6799999999999999988999999998754221 111111111 1112444333322
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH-hcCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 212 ~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
++......+||||||+||+|.++.... ....+.. ..+..+++.||.|||++|
T Consensus 81 -------------------------~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~ 135 (287)
T d1opja_ 81 -------------------------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 135 (287)
T ss_dssp -------------------------EECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------cEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence 122345678999999999998875432 2234443 345678999999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
|+||||||+|||++.+|.+||+|||+++.++........+...+..+..||. +..+..++++|+||+|+.+++++
T Consensus 136 iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~-----~~~~~~~~k~DiwS~Gv~l~ell 210 (287)
T d1opja_ 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-----LAYNKFSIKSDVWAFGVLLWEIA 210 (287)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHH-----HHHCCCSHHHHHHHHHHHHHHHH
T ss_pred cccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHH-----HcCCCCCchhhhhhHHHHHHHHH
Confidence 9999999999999999999999999999875542211111111223334443 44455688999999999999999
Q ss_pred HH
Q 011399 369 DD 370 (487)
Q Consensus 369 ~~ 370 (487)
+.
T Consensus 211 ~~ 212 (287)
T d1opja_ 211 TY 212 (287)
T ss_dssp TT
T ss_pred hC
Confidence 73
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.9e-32 Score=272.91 Aligned_cols=296 Identities=15% Similarity=0.108 Sum_probs=175.6
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|+.+ +.||+|+||+||+|+++.+|+.||||++++...... .+.
T Consensus 8 ~rY~~~--~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--------------------------------~~~- 52 (345)
T d1pmea_ 8 PRYTNL--SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY--------------------------------CQR- 52 (345)
T ss_dssp TTEEEE--EECC---CCCEEEEEETTTCSEEEEEEECCTTCHHH--------------------------------HHH-
T ss_pred CCeEEE--EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHH--------------------------------HHH-
Confidence 446555 789999999999999988999999999875421110 011
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecC---CCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY---TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLR 282 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~ 282 (487)
+.+|...+.++ .+...+.+..++... ....+++|+|+.|++|.++.............+..++..||+
T Consensus 53 -----~~~Ei~il~~l----~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~ 123 (345)
T d1pmea_ 53 -----TLREIKILLRF----RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLK 123 (345)
T ss_dssp -----HHHHHHHHHHC----CCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHc----CCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHH
Confidence 12222222222 111112222222211 123456667778999998854433333444567788999999
Q ss_pred HHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcchHH
Q 011399 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY-ALDFLSPDVDVTPIV 361 (487)
Q Consensus 283 ~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~Di~sl~ 361 (487)
|||++||+||||||+|||++.+|.+||+|||++............ .....+.+..+++++. .....++++|+||+|
T Consensus 124 yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG 200 (345)
T d1pmea_ 124 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF---LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 200 (345)
T ss_dssp HHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCT---TCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHH
T ss_pred HHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCcccee---eccccccceechHHHhhcCCCCCchhhhhccC
Confidence 999999999999999999999999999999999876554211000 0001122233333332 233457789999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccC
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTD 441 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~ 441 (487)
+.+++++++. .++...+.....+......... +..... .......... ....|.... .| ...+...
T Consensus 201 ~il~eml~g~--~pf~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~-~~~~~~~~~----~~--~~~~~~~ 266 (345)
T d1pmea_ 201 CILAEMLSNR--PIFPGKHYLDQLNHILGILGSP----SQEDLN-CIINLKARNY-LLSLPHKNK----VP--WNRLFPN 266 (345)
T ss_dssp HHHHHHHHSS--CSCCCSSHHHHHHHHHHHHCSC----CHHHHH-TCCCHHHHHH-HHTSCCCCC----CC--HHHHCTT
T ss_pred ceehHHhhCC--CCCCCCCHHHHHHHHhhhccCC----Chhhhh-hhhhhhhhcc-cccCCccCC----CC--HHHhCCC
Confidence 9999999853 4555555444444433332211 111000 0000000000 001111110 11 1233446
Q ss_pred CCHHHHHHHHHHHhhcCcccccccchhhccccccccccccc
Q 011399 442 PNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVVCDI 482 (487)
Q Consensus 442 ~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~~~~ 482 (487)
.++++++.+.+||..||..||+..+.+.|+||+....+.|.
T Consensus 267 ~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~~ 307 (345)
T d1pmea_ 267 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 307 (345)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGGS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCccC
Confidence 78999999999999999999999999999999866655443
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9e-32 Score=263.24 Aligned_cols=283 Identities=19% Similarity=0.163 Sum_probs=174.5
Q ss_pred HhhhcccCCcccccccccEEEEEEEccC-CcEEEEEEecCChH-----HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYS-GQIVAVKVQRPGIE-----EAIGLDFYLIRGVGFLINKYVDIITTDVVALI 198 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~-g~~VAVKv~~p~~~-----~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~ 198 (487)
++.|+-+ +.||+|+||.||+|++..+ |+.||||+++.... .....++.+++.+. ...|+|+++++
T Consensus 6 ~~~Y~i~--~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~-------~~~HpnIv~~~ 76 (305)
T d1blxa_ 6 DQQYECV--AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE-------TFEHPNVVRLF 76 (305)
T ss_dssp GGTEEEE--EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHH-------HTCCTTBCCEE
T ss_pred cCCEEEE--EEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHh-------hcCCCCcceee
Confidence 4556666 6799999999999998655 67899999864311 11122222222221 11234333322
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHH
Q 011399 199 DEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTG 276 (487)
Q Consensus 199 ~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~ 276 (487)
+.+. . ...+.....+++|||++|+.+.........+.+. ...+..+
T Consensus 77 ~~~~------------------------------~--~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 124 (305)
T d1blxa_ 77 DVCT------------------------------V--SRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124 (305)
T ss_dssp EEEE------------------------------E--EECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHH
T ss_pred eeec------------------------------c--cccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHH
Confidence 2100 0 0011224568999999998765443333333443 4456788
Q ss_pred HHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 011399 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (487)
Q Consensus 277 i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (487)
+..||+|||++||+|||+||+|||++.+|.+||+|||++......... ....+++..+++++..-.-.++++|
T Consensus 125 i~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~-------~~~~gT~~Y~APE~~~~~~y~~~~D 197 (305)
T d1blxa_ 125 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-------TSVVVTLWYRAPEVLLQSSYATPVD 197 (305)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGG-------CCCCCCCTTCCHHHHTTCCCCTHHH
T ss_pred HHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccC-------CCcccChhhcCcchhcCCCCChheh
Confidence 999999999999999999999999999999999999999877654321 1112233344444444455688999
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCC-CCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHH
Q 011399 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYP-FNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFA 435 (487)
Q Consensus 357 i~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~ 435 (487)
+||+|+.+++++++. .|+...+....+..+...+.... ...|.... ......... ...| .
T Consensus 198 iwSlG~il~ell~g~--~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~--~ 258 (305)
T d1blxa_ 198 LWSVGCIFAEMFRRK--PLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA-----------LPRQAFHSK----SAQP--I 258 (305)
T ss_dssp HHHHHHHHHHHHHSS--CSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS-----------SCGGGSCCC----CCCC--G
T ss_pred hhchHHHHHHHHHCC--CCCCCCCHHHHHHHHHHhhCCCchhccccccc-----------chhhhhccc----cccc--h
Confidence 999999999999854 45655554444444333221100 00010000 000000000 0000 1
Q ss_pred HHhccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 436 KRLLTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 436 ~~l~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.......++.+++.+.+||.+||..|++..+.+.||||+
T Consensus 259 ~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~ 297 (305)
T d1blxa_ 259 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297 (305)
T ss_dssp GGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred hhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhc
Confidence 223346789999999999999999999999999999995
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=1.3e-31 Score=261.31 Aligned_cols=209 Identities=16% Similarity=0.177 Sum_probs=129.7
Q ss_pred cccccccccEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|+++.+|+ .||||.+......... +.+.+.++.+....|+|++++++.
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~E~~~l~~l~HpnIv~l~g~---------- 95 (299)
T d1jpaa_ 32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR------RDFLSEASIMGQFDHPNVIHLEGV---------- 95 (299)
T ss_dssp EEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHH------HHHHHHHHHHTTCCCTTBCCEEEE----------
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHH------HHHHHHHHHHHhCCCCCCccEEEE----------
Confidence 689999999999999976664 6899988755332211 111111122222335554444331
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (487)
....+..++|||||+||+|.++........+.. ..+..+++.||.|||++|
T Consensus 96 ---------------------------~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~ 148 (299)
T d1jpaa_ 96 ---------------------------VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 148 (299)
T ss_dssp ---------------------------ECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---------------------------EeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 223466799999999999988754433334543 345678889999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
++||||||+|||++.+|.+||+|||+++.+...... ...+.. ...+.+.+++++....+..++++|+||+|+.++|+
T Consensus 149 iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el 226 (299)
T d1jpaa_ 149 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL--GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 226 (299)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC-------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred CccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecc--cccCCccccCHHHHhcCCCCcccccccchHHHHHH
Confidence 999999999999999999999999999987654321 111111 11233445555566667778889999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHH
Q 011399 368 FDDALNSSVSELNFKTIVDGL 388 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l 388 (487)
++. ...|+.+.+...+...+
T Consensus 227 ~t~-g~~Pf~~~~~~~~~~~i 246 (299)
T d1jpaa_ 227 MSY-GERPYWDMTNQDVINAI 246 (299)
T ss_dssp HTT-SCCTTTTCCHHHHHHHH
T ss_pred HhC-CCCCCCCCCHHHHHHHH
Confidence 962 13466666665555444
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.3e-31 Score=252.94 Aligned_cols=200 Identities=16% Similarity=0.117 Sum_probs=125.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++ +|+.||||+++.+.... -..++++ +.+....|+|++++++
T Consensus 11 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~----~~~~~E~----~~l~~l~HpnIv~~~g-------------- 67 (263)
T d1sm2a_ 11 QEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSE----EDFIEEA----EVMMKLSHPKLVQLYG-------------- 67 (263)
T ss_dssp EEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCH----HHHHHHH----HHHHHCCCTTBCCEEE--------------
T ss_pred EEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcH----HHHHHHH----HHHHhcCCCCcccccc--------------
Confidence 67999999999999997 88899999987542211 0011111 1111122444333322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~givH 291 (487)
+....+..++||||++||+|.++........+.. ..+..+++.|+.|+|++|++|
T Consensus 68 -----------------------~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiH 124 (263)
T d1sm2a_ 68 -----------------------VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124 (263)
T ss_dssp -----------------------EECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred -----------------------eeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceee
Confidence 1223466799999999999988754333334433 346688889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+|||++.++.+||+|||+++.+.........+...+..+..|| .+..+..++++|+||+|+.++++++.-
T Consensus 125 rDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE-----~l~~~~~~~k~DVwS~Gvil~el~t~~ 199 (263)
T d1sm2a_ 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-----VFSFSRYSSKSDVWSFGVLMWEVFSEG 199 (263)
T ss_dssp TTCSGGGEEECGGGCEEECSCC------------------CTTSCCHH-----HHTTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChH-----HhcCCCCCchhhhcchHHHHHHHHHCC
Confidence 999999999999999999999999887655333222222223334444 445566688899999999999999732
Q ss_pred ccCCCCcCcHHHHH
Q 011399 372 LNSSVSELNFKTIV 385 (487)
Q Consensus 372 ~~~~~~~~~~~~~~ 385 (487)
. .+....+...+.
T Consensus 200 ~-~~~~~~~~~~~~ 212 (263)
T d1sm2a_ 200 K-IPYENRSNSEVV 212 (263)
T ss_dssp C-CTTCSCCHHHHH
T ss_pred C-CCCCCCCHHHHH
Confidence 1 233444444433
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.5e-31 Score=264.93 Aligned_cols=282 Identities=18% Similarity=0.179 Sum_probs=174.4
Q ss_pred hhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 126 ~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
+.|+.+ +.||+|+||.||+|+++.+|+.||||+++........ .+.
T Consensus 18 ~rY~i~--~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~-------------------------------~~~- 63 (348)
T d2gfsa1 18 ERYQNL--SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-------------------------------AKR- 63 (348)
T ss_dssp TTEEEE--EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHH-------------------------------HHH-
T ss_pred CCeEEE--EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHH-------------------------------HHH-
Confidence 345555 7899999999999999889999999998754221100 011
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeec----CCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD----YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSL 281 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l 281 (487)
+.+|...+.++ .+...+.+..++.. .....+++|||+.|++|.++...+.........+..++..||
T Consensus 64 -----~~~Ei~il~~l----~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL 134 (348)
T d2gfsa1 64 -----TYRELRLLKHM----KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134 (348)
T ss_dssp -----HHHHHHHHHHC----CCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhc----CCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHH
Confidence 12222222222 11111222222211 123346778888999998875433334445666778999999
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
.|||++||+|||+||+|||++.+|.++++|||++......... ...+..+..|+.. ....+.+.++|+||+|
T Consensus 135 ~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~----~~g~~~y~apE~~----~~~~~~~~~~DiwSlG 206 (348)
T d2gfsa1 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG----YVATRWYRAPEIM----LNWMHYNQTVDIWSVG 206 (348)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSS----SCHHHHTSCHHHH----TTCSCCCTTHHHHHHH
T ss_pred HHHHhCCCcccccCCccccccccccccccccchhcccCccccc----ccccccccCchhh----cCCccCCcccchhhhh
Confidence 9999999999999999999999999999999999887654321 1223344445542 2344568899999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhh--hhCCCCChHHhHhHHHHHHhc
Q 011399 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLAL--YADPNFKVLAASYPYFAKRLL 439 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~--~ldP~~~~~~~~~p~~~~~l~ 439 (487)
+.+++++++. .++...+.......+...... .+........... ...... .-.|.... ....
T Consensus 207 v~l~~ll~g~--~pF~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~ 270 (348)
T d2gfsa1 207 CIMAELLTGR--TLFPGTDHIDQLKLILRLVGT----PGAELLKKISSES-ARNYIQSLTQMPKMNF---------ANVF 270 (348)
T ss_dssp HHHHHHHHSS--CSCCCSSHHHHHHHHHHHHCC----CCHHHHTTCCCHH-HHHHHTTSCCCCCCCH---------HHHS
T ss_pred HHHHHHHhCC--CCCCCCCHHHHHHHHHHhcCC----CChHHhhhccchh-hhhhhhhcccCCCcch---------hhhc
Confidence 9999999853 455555554444444333221 1111110000000 000000 01111111 1223
Q ss_pred cCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 440 TDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 440 ~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
...++++++.+.+||..||++|++..+.+.|+||.
T Consensus 271 ~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~ 305 (348)
T d2gfsa1 271 IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305 (348)
T ss_dssp TTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred CCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhC
Confidence 46789999999999999999999999999999996
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.7e-32 Score=272.22 Aligned_cols=273 Identities=19% Similarity=0.183 Sum_probs=168.4
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++.+... ...++++++. ..|+|++++.+
T Consensus 26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~Ei~il~~----------l~h~niv~~~~-------------- 80 (350)
T d1q5ka_ 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-KNRELQIMRK----------LDHCNIVRLRY-------------- 80 (350)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS-CCHHHHHHHH----------CCCTTBCCEEE--------------
T ss_pred eEEeeCcCeEEEEEEECCCCCEEEEEEECccchH-HHHHHHHHHh----------cCCCCCCcEEE--------------
Confidence 6799999999999999989999999998754211 1222222221 12333333222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec-----CCCCceEEEeecCCCCcCcHHHHH--hcCCC--HHHHHHHHHHHHHHHH
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD-----YTSGKVLTMEWVEGVKLNEQVAIE--SQGLK--VLDLVNTGIQCSLRQL 284 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~-----~~~~~~LvmE~~~G~~L~~~~~~~--~~~~~--~~~~~~~~i~~~l~~l 284 (487)
++.. .....+||||||+|+.+..+.... ...++ ....+..++..||+||
T Consensus 81 ----------------------~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yL 138 (350)
T d1q5ka_ 81 ----------------------FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138 (350)
T ss_dssp ----------------------EEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------EEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1111 112257999999887555443322 22343 4456778999999999
Q ss_pred HHCCccccCCCCCCeEEcCCC-cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 285 LEYGYFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 285 h~~givH~Dlkp~Nili~~~g-~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
|++||+||||||+|||++.+| .+||+|||++..+...... .....+..+..|+.+ ......++++|+||+||.
T Consensus 139 H~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~~DIwSlG~i 212 (350)
T d1q5ka_ 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELI----FGATDYTSSIDVWSAGCV 212 (350)
T ss_dssp HTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCC--CSCCSCTTSCCHHHH----TTCSSCCTHHHHHHHHHH
T ss_pred HhcCCcccCCCcceEEEecCCCceeEecccchhhccCCccc--ccccccccccChHHh----hcccCCCcceeecccceE
Confidence 999999999999999999776 8999999999877543211 111122233444432 222345888999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++. .++...+....+..+...+. . .+.+. .+.. .....+..+.-. ...|+ .+......+
T Consensus 213 l~el~~g~--~pf~~~~~~~~l~~i~~~~g---~-~~~~~---~~~~-----~~~~~~~~~~~~-~~~~~-~~~~~~~~s 276 (350)
T d1q5ka_ 213 LAELLLGQ--PIFPGDSGVDQLVEIIKVLG---T-PTREQ---IREM-----NPNYTEFKFPQI-KAHPW-TKVFRPRTP 276 (350)
T ss_dssp HHHHHHTS--CSSCCSSHHHHHHHHHHHHC---C-CCHHH---HHHH-----CC---CCCCCCC-CCCCG-GGTSCTTSC
T ss_pred EEehhhCC--CCCCCCCHHHHHHHHHHHhC---C-ChHHh---hhhh-----ccchhhcccccc-ccCch-hhhcccCCC
Confidence 99999853 45555554444444433321 1 11111 0100 000011111000 00111 111223568
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhcccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVDF 475 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~ 475 (487)
+++++.+.+||..||++|++..+.+.|+||+-
T Consensus 277 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~ 308 (350)
T d1q5ka_ 277 PEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308 (350)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence 99999999999999999999999999999964
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.8e-32 Score=262.20 Aligned_cols=246 Identities=15% Similarity=0.104 Sum_probs=151.5
Q ss_pred ccCCcccccccccEEEEEEEcc--CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 130 SISPSPIAAASLGQVYKAQLKY--SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 130 ~~~~~~ig~Gs~gqV~~a~~~~--~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
.++++.||+|+||+||+|.++. +++.||||+++....+. ...+.+.+.+..+....|+|++++++
T Consensus 9 ~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~-----~~~~~~~~E~~il~~l~HpnIv~~~g-------- 75 (277)
T d1xbba_ 9 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-----ALKDELLAEANVMQQLDNPYIVRMIG-------- 75 (277)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----C-----HHHHHHHHHHHHHHTCCCTTBCCEEE--------
T ss_pred eecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCH-----HHHHHHHHHHHHHHhCCCCCCceEEE--------
Confidence 4566789999999999998753 45789999986432211 00011111111111222333333222
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh 285 (487)
++ + ....+||||||+||+|.++... ....+.. ..+..+++.||.|+|
T Consensus 76 ----------------------------~~-~-~~~~~lvmE~~~~g~L~~~l~~-~~~l~~~~~~~i~~qi~~gl~ylH 124 (277)
T d1xbba_ 76 ----------------------------IC-E-AESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLE 124 (277)
T ss_dssp ----------------------------EE-E-SSSEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------Ee-c-cCCEEEEEEcCCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHhhHH
Confidence 11 1 3456899999999999887543 2234443 445578889999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
++||+|||+||+|||++.+|.+|++|||+++.+.......... ....+.+.+++++....+..++++|+||+|+.++
T Consensus 125 ~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~---~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ 201 (277)
T d1xbba_ 125 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 201 (277)
T ss_dssp HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-------CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred hCCcccCCCcchhhcccccCcccccchhhhhhccccccccccc---cccCCCceecCchhhcCCCCCchhhhccchhhhh
Confidence 9999999999999999999999999999998764331100000 1112233344444445555678899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHH
Q 011399 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (487)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (487)
++++. ...|+.+.+...+...+. .......| ...+++
T Consensus 202 ellt~-g~~Pf~~~~~~~~~~~i~---~~~~~~~p---------------------------------------~~~~~~ 238 (277)
T d1xbba_ 202 EAFSY-GQKPYRGMKGSEVTAMLE---KGERMGCP---------------------------------------AGCPRE 238 (277)
T ss_dssp HHHTT-TCCSSTTCCHHHHHHHHH---TTCCCCCC---------------------------------------TTCCHH
T ss_pred HHhhC-CCCCCCCCCHHHHHHHHH---cCCCCCCC---------------------------------------cccCHH
Confidence 99862 134555555444332221 11111111 123567
Q ss_pred HHHHHHHHHhhcCccccccc
Q 011399 446 LRDALVELLFKDGRFRHVLY 465 (487)
Q Consensus 446 ~r~~l~~~L~~d~~~r~~~~ 465 (487)
+++.+.+|+..||..|++..
T Consensus 239 ~~~li~~cl~~dp~~RPs~~ 258 (277)
T d1xbba_ 239 MYDLMNLCWTYDVENRPGFA 258 (277)
T ss_dssp HHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHHHHcCCCHhHCcCHH
Confidence 77888888888888887653
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.8e-33 Score=275.73 Aligned_cols=249 Identities=14% Similarity=0.110 Sum_probs=150.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++.. .....++.++..+ ..|+|++++++
T Consensus 18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--~~~~~E~~~~~~~---------~~hpnIv~l~~-------------- 72 (335)
T d2ozaa1 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWRA---------SQCPHIVRIVD-------------- 72 (335)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHHH---------TTSTTBCCEEE--------------
T ss_pred EEeeeccCeEEEEEEECCCCCEEEEEEECCc--HHHHHHHHHHHHh---------cCCCCCCeEEE--------------
Confidence 4699999999999999889999999998643 1112222111100 01333332222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec---CCCCceEEEeecCCCCcCcHHHHHh---cCCCHHHHHHHHHHHHHHHHHHC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD---YTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQLLEY 287 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~---~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~lh~~ 287 (487)
++.+ ..+..|||||||+||+|.++..... ..+.....+..++..|+.|||+.
T Consensus 73 ----------------------~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~ 130 (335)
T d2ozaa1 73 ----------------------VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 130 (335)
T ss_dssp ----------------------EEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----------------------EEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc
Confidence 2211 1244689999999999998754321 22344567778899999999999
Q ss_pred CccccCCCCCCeEEcC---CCcEEEEecCCCCCCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 288 GYFHADPHPGNLLATP---EGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 288 givH~Dlkp~Nili~~---~g~i~l~DFGla~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
||+||||||+|||++. ++.+||+|||+++....... ...++ .+..++++++.....++++|+||+|+.
T Consensus 131 ~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~g--------t~~y~aPE~~~~~~y~~~~DiwSlGvi 202 (335)
T d2ozaa1 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--------TPYYVAPEVLGPEKYDKSCDMWSLGVI 202 (335)
T ss_dssp TEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSC--------CCSSCCCCCCCGGGGSHHHHHHHHHHH
T ss_pred CCccccccccccccccccccccccccccceeeeccCCCccccccC--------CcccCCcHHHcCCCCCHHHHHHhhchh
Confidence 9999999999999985 46799999999987644321 11111 111222211111122445677777777
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++. .|+.+.+.......+... .....++... |. ....+
T Consensus 203 ly~lltg~--~Pf~~~~~~~~~~~~~~~---------------------------i~~~~~~~~~---~~-----~~~~s 245 (335)
T d2ozaa1 203 MYILLCGY--PPFYSNHGLAISPGMKTR---------------------------IRMGQYEFPN---PE-----WSEVS 245 (335)
T ss_dssp HHHHTTSS--CSCEETTCC--------C---------------------------CCSCSSSCCT---TH-----HHHSC
T ss_pred HHHHhhCC--CCCCCCCHHHHHHHHHHH---------------------------HhcCCCCCCC---cc-----cccCC
Confidence 77777632 233222111111111100 0001111100 00 01357
Q ss_pred HHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 444 PYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
+++++.+.+||.+||..|++..+.+.|+||.
T Consensus 246 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~ 276 (335)
T d2ozaa1 246 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 276 (335)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHHSHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHcCHHhh
Confidence 8899999999999999999999999999994
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.3e-31 Score=254.96 Aligned_cols=244 Identities=16% Similarity=0.199 Sum_probs=154.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++ +++.||||+++.+.... + +|.+
T Consensus 23 ~~iG~G~fg~Vy~~~~~-~~~~vAiK~l~~~~~~~----------------------------------~------~~~~ 61 (285)
T d1fmka3 23 VKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP----------------------------------E------AFLQ 61 (285)
T ss_dssp EEEEECSSCEEEEEEET-TTEEEEEEECCTTSSCH----------------------------------H------HHHH
T ss_pred eEEeeCCCeEEEEEEEC-CCCEEEEEEECcccCCH----------------------------------H------HHHH
Confidence 67999999999999998 67789999987542210 0 1233
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++. +++ |.+++.- .....++||||++||++..+..... ...+. ...+..+++.|+.|||+.|+
T Consensus 62 E~~~l~~l~-----h~n--Iv~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~i 134 (285)
T d1fmka3 62 EAQVMKKLR-----HEK--LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 134 (285)
T ss_dssp HHHHHHHCC-----CTT--BCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcc-----cCC--EeEEEEEEecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhhe
Confidence 333333321 111 1122211 2356789999999999887654432 23444 44566888899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+||+|||++.+|.+||+|||+++.+.+......... .+.+..++++.+..+..++++|+||+|+.++++++
T Consensus 135 vH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t 209 (285)
T d1fmka3 135 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA-----KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 209 (285)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCCTTC-------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ecccccceEEEECCCCcEEEcccchhhhccCCCceeeccc-----cccccccChHHHhCCCCCcHHhhhcchHHHHHHHh
Confidence 9999999999999999999999999988765432222222 23333444445556667889999999999999997
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHHHHH
Q 011399 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (487)
+-. .+....+...++..+. .......| ...++++++.
T Consensus 210 ~~~-p~~~~~~~~~~~~~i~---~~~~~~~~---------------------------------------~~~~~~l~~l 246 (285)
T d1fmka3 210 KGR-VPYPGMVNREVLDQVE---RGYRMPCP---------------------------------------PECPESLHDL 246 (285)
T ss_dssp TTC-CSSTTCCHHHHHHHHH---TTCCCCCC---------------------------------------TTSCHHHHHH
T ss_pred CCC-CCCCCCCHHHHHHHHH---hcCCCCCC---------------------------------------cccCHHHHHH
Confidence 421 2333334333332221 11111111 1235677888
Q ss_pred HHHHHhhcCcccccccc--hhhcccc
Q 011399 450 LVELLFKDGRFRHVLYS--PFTINLV 473 (487)
Q Consensus 450 l~~~L~~d~~~r~~~~~--~~~~~~~ 473 (487)
+.+||..||+.|++..+ .+.++||
T Consensus 247 i~~cl~~dP~~Rps~~~i~~~L~~~~ 272 (285)
T d1fmka3 247 MCQCWRKEPEERPTFEYLQAFLEDYF 272 (285)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HHHHcccCHhHCcCHHHHHHHHhhhh
Confidence 89999999999987655 4557777
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.3e-32 Score=265.59 Aligned_cols=281 Identities=14% Similarity=0.093 Sum_probs=171.9
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+.+ +.||+|+||.||+|+++.+|+.||||+++...... .....+.+
T Consensus 4 y~~i--~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~-------------------------------~~~~~~~~ 50 (292)
T d1unla_ 4 YEKL--EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-------------------------------GVPSSALR 50 (292)
T ss_dssp EEEE--EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST-------------------------------THHHHHHH
T ss_pred CEee--eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCCh-------------------------------HHHHHHHH
Confidence 5555 67999999999999999899999999986432110 00011112
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCC--CHHHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~~~~~~~~i~~~l~~lh 285 (487)
| ...+.++ +++++.-..-+.......++|||++.|+.+..+... .... .....+..++..||+|||
T Consensus 51 E------~~il~~l-----~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~q~~~aL~~lH 118 (292)
T d1unla_ 51 E------ICLLKEL-----KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCH 118 (292)
T ss_dssp H------HHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred H------HHHHHhc-----CcCCEEeeccccccccceeEEeeecccccccccccc-ccccchhHHHHHHHHHHHHHHHhh
Confidence 2 2221111 122222222233345667899999999888766332 2223 344566788889999999
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcchHHHHH
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY-ALDFLSPDVDVTPIVPAL 364 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~Di~sl~~~l 364 (487)
++||+||||||+|||++.++.+|++|||.+........... .....+...+++.. ...+.++++|+||+|+.+
T Consensus 119 ~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il 192 (292)
T d1unla_ 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS------AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 192 (292)
T ss_dssp HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCC------SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred cCCEeeecccCcccccccCCceeeeecchhhcccCCCccce------eeccccchhhhhHhccCCCCCchhhccccchHH
Confidence 99999999999999999999999999999987654311000 00111222223333 233467889999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCH
Q 011399 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNP 444 (487)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p 444 (487)
++++++..+ .+...+....+..+............+..... ......+...... . ........++
T Consensus 193 ~ell~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~---~--~~~~~~~~s~ 257 (292)
T d1unla_ 193 AELANAGRP-LFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL---------PDYKPYPMYPATT---S--LVNVVPKLNA 257 (292)
T ss_dssp HHHTTTSCC-SCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS---------TTCCCCCCCCTTC---C--CTTTSTTCCH
T ss_pred HHHhhCCCC-CCCCCCHHHHHHHHHhhcCCCChhhhhhhhhc---------ccccccccccccc---h--hhhccccCCH
Confidence 999875432 23344444445444444332222111111000 0000001100000 0 0112235688
Q ss_pred HHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 445 YLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 445 ~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
.+++.+.+||..||+.||+..+.+.|+||+
T Consensus 258 ~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~ 287 (292)
T d1unla_ 258 TGRDLLQNLLKCNPVQRISAEEALQHPYFS 287 (292)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHTTSGGGS
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcChhhc
Confidence 999999999999999999999999999996
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.4e-32 Score=261.17 Aligned_cols=184 Identities=16% Similarity=0.192 Sum_probs=123.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++ +++.||||+++.+.... + .|.+
T Consensus 19 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~----------------------------------~------~~~~ 57 (272)
T d1qpca_ 19 ERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSP----------------------------------D------AFLA 57 (272)
T ss_dssp EEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCH----------------------------------H------HHHH
T ss_pred EEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCH----------------------------------H------HHHH
Confidence 67999999999999987 88999999987542110 0 0222
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHH-HhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAI-ESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (487)
|+..+.++. +++ |.+++.- .....++||||++||+|.+.... ....++. ...+..+++.|+.|||++||
T Consensus 58 E~~~l~~l~-----Hpn--Iv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~i 130 (272)
T d1qpca_ 58 EANLMKQLQ-----HQR--LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130 (272)
T ss_dssp HHHHHHHCC-----CTT--BCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhCC-----CCC--EeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 333322221 111 1111211 13456899999999999875432 2223443 34556888899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+||||||+|||++.++.+||+|||+++.+.........+. .+.+..++++....+..++++|+||+|+.++++++
T Consensus 131 vHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~-----~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt 205 (272)
T d1qpca_ 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA-----KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205 (272)
T ss_dssp ECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTC-----CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred ccCccchhheeeecccceeeccccceEEccCCcccccccc-----CCcccccChHHHhCCCCCchhhhhhhHHHHHHHHh
Confidence 9999999999999999999999999987754311100111 12222333444445556888999999999999997
Q ss_pred H
Q 011399 370 D 370 (487)
Q Consensus 370 ~ 370 (487)
.
T Consensus 206 ~ 206 (272)
T d1qpca_ 206 H 206 (272)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.7e-30 Score=250.34 Aligned_cols=195 Identities=15% Similarity=0.207 Sum_probs=123.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++ ..||||+++...... ... +.+.+.++.+....|+|++.+++
T Consensus 14 ~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~--~~~---~~~~~E~~~l~~l~HpnIv~~~~-------------- 71 (276)
T d1uwha_ 14 QRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTP--QQL---QAFKNEVGVLRKTRHVNILLFMG-------------- 71 (276)
T ss_dssp SEEEECSSCEEEEEESS---SEEEEEECCCSSCCT--THH---HHHHHHHHHHTTCCCTTBCCEEE--------------
T ss_pred EEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCH--HHH---HHHHHHHHHHHhCCCCCEeeeeE--------------
Confidence 67999999999999864 369999987432110 001 11111111111222444333221
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~givH 291 (487)
+ ......+||||||+||+|.++........+... .+..+++.|+.|||++||+|
T Consensus 72 -----------------------~-~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivH 127 (276)
T d1uwha_ 72 -----------------------Y-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127 (276)
T ss_dssp -----------------------E-ECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred -----------------------E-EeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEec
Confidence 1 123457899999999999887543333355443 45678889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc---CCCCCCCCcchHHHHHHHHH
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL---DFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~Di~sl~~~l~~~~ 368 (487)
|||||+|||++.++.+||+|||+++..+........ ....+++.+++++++.. +.++.++|+||+|+.+++++
T Consensus 128 rDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~----~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~ 203 (276)
T d1uwha_ 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF----EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203 (276)
T ss_dssp SCCCGGGEEEETTSSEEECCCCCSCC----------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred cccCHHHEEEcCCCCEEEccccceeeccccCCcccc----cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHH
Confidence 999999999999999999999999887654322111 11233444555555432 33467789999999999999
Q ss_pred HHhccCCCCcCc
Q 011399 369 DDALNSSVSELN 380 (487)
Q Consensus 369 ~~~~~~~~~~~~ 380 (487)
++ ..|+.+.+
T Consensus 204 tg--~~Pf~~~~ 213 (276)
T d1uwha_ 204 TG--QLPYSNIN 213 (276)
T ss_dssp HS--SCTTTTCC
T ss_pred HC--CCCCCCCC
Confidence 84 34555443
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.6e-30 Score=259.73 Aligned_cols=291 Identities=14% Similarity=0.136 Sum_probs=165.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|+++.+|+.||||+++......-.. .++++++. .+....|+|++.+.+.|.
T Consensus 23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~-~~~~~Ei~----il~~l~hpnIv~~~~~f~----------- 86 (355)
T d2b1pa1 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA-KRAYRELV----LMKCVNHKNIISLLNVFT----------- 86 (355)
T ss_dssp EECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHH-HHHHHHHH----HHHHCCCTTBCCCSEEEC-----------
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHH-HHHHHHHH----HHHhcCCCCeeEEEEEEe-----------
Confidence 68999999999999999899999999997542221000 00111111 011112343333322110
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
..-..+..+..|+|||||.|+.+... ...........+..++..|+.|||+.||+|||
T Consensus 87 --------------------~~~~~~~~~~~~iv~Ey~~~~l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrD 144 (355)
T d2b1pa1 87 --------------------PQKTLEEFQDVYLVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 144 (355)
T ss_dssp --------------------SCCSTTTCCEEEEEEECCSEEHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred --------------------cccccccCceeEEEEeccchHHHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 00011223567899999988766543 22333445566778899999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~ 373 (487)
+||+|||++.++.++++|||+++........ .....+..+..||.+. -...++++|+||+||.+++++.+.
T Consensus 145 lKP~Nil~~~~~~~kl~df~~~~~~~~~~~~--~~~~~t~~y~aPE~l~-----~~~~~~~~DiwSlG~~l~ell~g~-- 215 (355)
T d2b1pa1 145 LKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMVRHK-- 215 (355)
T ss_dssp CCGGGEEECTTCCEEECCCCC-----------------CCTTCCHHHHT-----TCCCCTTHHHHHHHHHHHHHHHSS--
T ss_pred CCccccccccccceeeechhhhhcccccccc--ccccccccccChhhhc-----CCCCCCCcccccccchHHHHhhCC--
Confidence 9999999999999999999998877654322 1222334556666542 234588899999999999999854
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCC--CCChHHhH----hHHHHHHhccCCCHHHH
Q 011399 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADP--NFKVLAAS----YPYFAKRLLTDPNPYLR 447 (487)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP--~~~~~~~~----~p~~~~~l~~~~~p~~r 447 (487)
.++...+.......+.... ....|..+....... ........+ ........ .+.. .......+++++
T Consensus 216 ~pF~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~ 288 (355)
T d2b1pa1 216 ILFPGRDYIDQWNKVIEQL---GTPCPEFMKKLQPTV---RNYVENRPKYAGLTFPKLFPDSLFPAD-SEHNKLKASQAR 288 (355)
T ss_dssp CSSCCSSHHHHHHHHHHHH---CCCCHHHHTTSCHHH---HHHHHTSCCCCCCCHHHHSCGGGSCCS-SHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhc---cCCCHHHHHHhhhhH---HHHhhcCcccccccccccccccccccc-ccccccCCHHHH
Confidence 4555555443333332222 222222211111111 111111111 11100000 0000 000011357889
Q ss_pred HHHHHHHhhcCcccccccchhhccccccccc
Q 011399 448 DALVELLFKDGRFRHVLYSPFTINLVDFEFV 478 (487)
Q Consensus 448 ~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~ 478 (487)
+++.+||..||+.|+++.+.+.|+||+..+.
T Consensus 289 dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~ 319 (355)
T d2b1pa1 289 DLLSKMLVIDPAKRISVDDALQHPYINVWYD 319 (355)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred HHHHHHCcCChhHCcCHHHHhcCcccCCCCC
Confidence 9999999999999999999999999976443
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=9.9e-32 Score=258.83 Aligned_cols=256 Identities=14% Similarity=0.076 Sum_probs=162.9
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
+..|+-. +.||+|+||.||+|+++.+|+.||||+++....... ....+.
T Consensus 3 ~~~Y~i~--~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~-------------------~~~~~~---------- 51 (273)
T d1xwsa_ 3 ESQYQVG--PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-------------------GELPNG---------- 51 (273)
T ss_dssp TTTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCE-------------------EECTTC----------
T ss_pred CCeEEEe--EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccch-------------------hhhhHH----------
Confidence 3445433 689999999999999998999999999864311000 000000
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceee--ecCCCCceEEEeecCC-CCcCcHHHHHhcCCC--HHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEG-VKLNEQVAIESQGLK--VLDLVNTGIQC 279 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G-~~L~~~~~~~~~~~~--~~~~~~~~i~~ 279 (487)
..+.+|...+.++. ..+++| .+++ .+..+..++||||++| +++.++.. .....+ ....+..++..
T Consensus 52 ----~~~~~E~~il~~l~---~~h~nI--v~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~-~~~~l~e~~~~~~~~qi~~ 121 (273)
T d1xwsa_ 52 ----TRVPMEVVLLKKVS---SGFSGV--IRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLE 121 (273)
T ss_dssp ----CEEEHHHHHHHHHC---SSSCSB--CCEEEEEECSSEEEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhc---cCCCCc--cEEEEEEeeCCeEEEEEEeccCcchHHHHHh-ccCCCCHHHHHHHHHHHHH
Confidence 00112222222221 112222 2222 2334567999999987 45555432 233344 44556788999
Q ss_pred HHHHHHHCCccccCCCCCCeEEcC-CCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~-~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~ 358 (487)
||.|+|+.||+|||+||+|||++. ++.+||+|||++............| +..+..||.+. ...+.+.++|+|
T Consensus 122 al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~G---T~~y~aPE~~~----~~~~~~~~~Diw 194 (273)
T d1xwsa_ 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG---TRVYSPPEWIR----YHRYHGRSAAVW 194 (273)
T ss_dssp HHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCS---CGGGSCHHHHH----HSCBCHHHHHHH
T ss_pred HHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccccccccccc---CCCcCCHHHHc----CCCCCCcccccc
Confidence 999999999999999999999985 4799999999998765443222222 23334455432 233445678999
Q ss_pred hHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHh
Q 011399 359 PIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRL 438 (487)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l 438 (487)
|+|+.+++++++. .|+...+ . + .. + ...+
T Consensus 195 SlGvilyell~g~--~Pf~~~~--~----i---~~---------------------~-----~~~~-------------- 223 (273)
T d1xwsa_ 195 SLGILLYDMVCGD--IPFEHDE--E----I---IR---------------------G-----QVFF-------------- 223 (273)
T ss_dssp HHHHHHHHHHHSS--CSCCSHH--H----H---HH---------------------C-----CCCC--------------
T ss_pred cceeeehhHhhCC--CCCCCch--H----H---hh---------------------c-----ccCC--------------
Confidence 9999999999853 3333210 0 0 00 0 0011
Q ss_pred ccCCCHHHHHHHHHHHhhcCcccccccchhhcccccccccc
Q 011399 439 LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVDFEFVV 479 (487)
Q Consensus 439 ~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~~~~~~ 479 (487)
....++++++.+.+||.+||+.|++..+.+.|+||.--..|
T Consensus 224 ~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~p 264 (273)
T d1xwsa_ 224 RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 264 (273)
T ss_dssp SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred CCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCCC
Confidence 12357889999999999999999999999999999654443
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.7e-31 Score=261.73 Aligned_cols=262 Identities=14% Similarity=0.146 Sum_probs=162.3
Q ss_pred hcccCCcccccccccEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (487)
|+.+ +.||+|+||.||+|+.. .+|+.||||++++..... ..... +
T Consensus 26 y~~~--~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~---------------------~~~~~--------~- 73 (322)
T d1vzoa_ 26 FELL--KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ---------------------KAKTT--------E- 73 (322)
T ss_dssp EEEE--EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE---------------------EESSG--------G-
T ss_pred eEEE--EEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhcc---------------------chHHH--------H-
Confidence 4444 78999999999999873 468999999986421000 00000 0
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-cCCCHHHHHHHHHHHHHHH
Q 011399 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQ 283 (487)
Q Consensus 205 l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~ 283 (487)
.+.+|++.+.++.+ ++.|.--.-+.+.....+++|||++|++|.+...... ........+..++..|+.|
T Consensus 74 -----~~~~E~~il~~l~h----~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~ 144 (322)
T d1vzoa_ 74 -----HTRTERQVLEHIRQ----SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 144 (322)
T ss_dssp -----GCCCHHHHHHHHHT----CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhccC----CCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 12233444444432 2222111122233456789999999999988754332 2233445566889999999
Q ss_pred HHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 284 lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
+|+.|++|||+||+|||++.+|.++|+|||+++.+.............+..+..|+.+.. .....++++|+||+||.
T Consensus 145 lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~ksDIWSlG~i 221 (322)
T d1vzoa_ 145 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG---GDSGHDKAVDWWSLGVL 221 (322)
T ss_dssp HHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTT---CC---CTHHHHHHHHHH
T ss_pred hhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhc---CCcCCCchhhhHHHHHH
Confidence 999999999999999999999999999999998876542211111111122233333211 11234678899999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCC
Q 011399 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPN 443 (487)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~ 443 (487)
+++++++. .|+...+.....+.+....... .|.+ ....+
T Consensus 222 LyelltG~--~PF~~~~~~~~~~~i~~~~~~~-------------------------~~~~--------------~~~~s 260 (322)
T d1vzoa_ 222 MYELLTGA--SPFTVDGEKNSQAEISRRILKS-------------------------EPPY--------------PQEMS 260 (322)
T ss_dssp HHHHHHSS--CTTSCTTSCCCHHHHHHHHHHC-------------------------CCCC--------------CTTSC
T ss_pred HHHHHhCC--CCCCCCCHHHHHHHHHHhcccC-------------------------CCCC--------------cccCC
Confidence 99999854 3343322111111111111100 1111 12467
Q ss_pred HHHHHHHHHHHhhcCccccc-----ccchhhccccc
Q 011399 444 PYLRDALVELLFKDGRFRHV-----LYSPFTINLVD 474 (487)
Q Consensus 444 p~~r~~l~~~L~~d~~~r~~-----~~~~~~~~~~~ 474 (487)
+++++.+.+||.+||.+|++ .-+.+.|+||+
T Consensus 261 ~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~ 296 (322)
T d1vzoa_ 261 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 296 (322)
T ss_dssp HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred HHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhc
Confidence 89999999999999999996 45788999995
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2e-31 Score=258.11 Aligned_cols=202 Identities=16% Similarity=0.153 Sum_probs=129.5
Q ss_pred ccccccccEEEEEEEcc--CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 135 PIAAASLGQVYKAQLKY--SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 135 ~ig~Gs~gqV~~a~~~~--~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
.||+|+||+||+|.++. ++..||||++++..... +.+. +.+.++.+....|+|++++++
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~---~~~~---~~~E~~il~~l~HpnIv~l~g------------- 76 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---DTEE---MMREAQIMHQLDNPYIVRLIG------------- 76 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---HHHH---HHHHHHHHHHCCCTTBCCEEE-------------
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHH---HHHH---HHHHHHHHHhCCCCCEeeEee-------------
Confidence 59999999999998753 45689999997653221 1110 111111111122343333222
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~giv 290 (487)
++ .+...+||||||+||+|.++........+. ...+..+++.||.|+|++||+
T Consensus 77 -----------------------~~--~~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~ii 131 (285)
T d1u59a_ 77 -----------------------VC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 131 (285)
T ss_dssp -----------------------EE--ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred -----------------------ee--ccCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 11 134578999999999998874333333443 445568888999999999999
Q ss_pred ccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 011399 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~ 370 (487)
||||||.|||++.+|.+||+|||+++.+......... .....+.+.+++++....+..++++|+||+|+.++|+++.
T Consensus 132 HrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~ 208 (285)
T d1u59a_ 132 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA---RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 208 (285)
T ss_dssp CCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECC---CCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred cCcCchhheeeccCCceeeccchhhhccccccccccc---ccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhC
Confidence 9999999999999999999999999876543110000 0001122334444455556668899999999999999862
Q ss_pred hccCCCCcCcHHHH
Q 011399 371 ALNSSVSELNFKTI 384 (487)
Q Consensus 371 ~~~~~~~~~~~~~~ 384 (487)
...|+.+.+...+
T Consensus 209 -G~~Pf~~~~~~~~ 221 (285)
T d1u59a_ 209 -GQKPYKKMKGPEV 221 (285)
T ss_dssp -SCCTTTTCCTHHH
T ss_pred -CCCCCCCCCHHHH
Confidence 1245555544333
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.5e-31 Score=251.30 Aligned_cols=201 Identities=12% Similarity=0.124 Sum_probs=134.7
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||.||+|+++ +++.||||+++.+.... -..++++ ..+....|+|++++++
T Consensus 10 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~----~~~~~Ev----~~~~~l~HpnIv~~~g-------------- 66 (258)
T d1k2pa_ 10 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE----DEFIEEA----KVMMNLSHEKLVQLYG-------------- 66 (258)
T ss_dssp CCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCH----HHHHHHH----HHHHTCCCTTBCCEEE--------------
T ss_pred EEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCH----HHHHHHH----HHHHhcCCCceeeEEE--------------
Confidence 67999999999999997 89999999987542211 0111111 1111222444333322
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
+.......++||||+++|++.+........... ...+..++..|+.|||+.||+|
T Consensus 67 -----------------------~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH 123 (258)
T d1k2pa_ 67 -----------------------VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123 (258)
T ss_dssp -----------------------EECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred -----------------------EEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 112246678999999999998875544444444 3345578889999999999999
Q ss_pred cCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 011399 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (487)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~ 371 (487)
||+||+||+++.++.+||+|||+++.+.........+ ..+.+.+++++....+-.++++|+||+|+.++++++.
T Consensus 124 ~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~-----~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~- 197 (258)
T d1k2pa_ 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG-----SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL- 197 (258)
T ss_dssp SCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC-----SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT-
T ss_pred ccccceeEEEcCCCcEEECcchhheeccCCCceeecc-----cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhc-
Confidence 9999999999999999999999998765432211111 1122233344444555568899999999999999862
Q ss_pred ccCCCCcCcHHHHHH
Q 011399 372 LNSSVSELNFKTIVD 386 (487)
Q Consensus 372 ~~~~~~~~~~~~~~~ 386 (487)
...|+...+...+..
T Consensus 198 g~~Pf~~~~~~~~~~ 212 (258)
T d1k2pa_ 198 GKMPYERFTNSETAE 212 (258)
T ss_dssp SCCTTTTSCHHHHHH
T ss_pred CCCCCCCCCHHHHHH
Confidence 124566666554443
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.3e-31 Score=261.55 Aligned_cols=190 Identities=15% Similarity=0.103 Sum_probs=124.1
Q ss_pred cccccccccEEEEEEEccCC-----cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSG-----QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g-----~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||+||+|+++.++ ..||||++......... .
T Consensus 43 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------~----- 85 (325)
T d1rjba_ 43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER--------------------------------E----- 85 (325)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------C--------------------------------H-----
T ss_pred eEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHH--------------------------------H-----
Confidence 67999999999999987544 37999998654221100 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc----------------------C
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ----------------------G 266 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~----------------------~ 266 (487)
.+.+|...+.++ .++++|.--.-+.......+||||||+||+|.++...... .
T Consensus 86 -~~~~E~~~l~~l----~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (325)
T d1rjba_ 86 -ALMSELKMMTQL----GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 160 (325)
T ss_dssp -HHHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------
T ss_pred -HHHHHHHHHHHh----cCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCC
Confidence 122222222222 1223221111122334667999999999999887543211 1
Q ss_pred CC--HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Q 011399 267 LK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARD 344 (487)
Q Consensus 267 ~~--~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
++ ....+..++..|+.|||++||+||||||+|||++.+|.+||+|||+++........... ....+.+..++++
T Consensus 161 l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~----~~~~gt~~y~aPE 236 (325)
T d1rjba_ 161 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR----GNARLPVKWMAPE 236 (325)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEE----TTEEECGGGCCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeee----ccccCCCccCChH
Confidence 22 23446688889999999999999999999999999999999999999876543211000 0111233444555
Q ss_pred HHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 345 YYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 345 ~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
.+..+..++++|+||+|+.++++++
T Consensus 237 ~l~~~~~~~~~DiwS~Gvil~emlt 261 (325)
T d1rjba_ 237 SLFEGIYTIKSDVWSYGILLWEIFS 261 (325)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred HHcCCCCCcceeccchhHHHHHHHh
Confidence 5556667889999999999999986
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.7e-29 Score=246.22 Aligned_cols=191 Identities=16% Similarity=0.135 Sum_probs=118.0
Q ss_pred cccccccccEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||+||+|+++. +++.||||+++....... . +
T Consensus 19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~---~-----------------------------~----- 61 (299)
T d1ywna1 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---H-----------------------------R----- 61 (299)
T ss_dssp EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHH---H-----------------------------H-----
T ss_pred eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHH---H-----------------------------H-----
Confidence 789999999999999753 457899999864321110 0 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCe-EeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---------------CCC--HH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------GLK--VL 270 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~--~~ 270 (487)
.+..|...+.++ .+++.+ ..-..+.+-....++|||||+||+|.++...... .++ ..
T Consensus 62 -~~~~e~~~l~~~----~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (299)
T d1ywna1 62 -ALMSELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 136 (299)
T ss_dssp -HHHHHHHHHHHH----CCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHH
T ss_pred -HHHHHHHHHHhh----cCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHH
Confidence 012222222222 223322 2222223334557999999999999988653221 122 34
Q ss_pred HHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 011399 271 DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF 350 (487)
Q Consensus 271 ~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (487)
..+..++..|+.|||++||+||||||+|||++.+|.+||+|||+++...........+ ...+++..++++.+.-+.
T Consensus 137 ~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~----~~~gt~~y~APE~l~~~~ 212 (299)
T d1ywna1 137 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG----DARLPLKWMAPETIFDRV 212 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTT----SCCCGGGGCCHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccC----ceeeCccccchhHhhcCC
Confidence 4556789999999999999999999999999999999999999998654331110000 011223333444445566
Q ss_pred CCCCCCcchHHHHHHHHHHH
Q 011399 351 LSPDVDVTPIVPALRNFFDD 370 (487)
Q Consensus 351 ~~~~~Di~sl~~~l~~~~~~ 370 (487)
.++++|+||+|+.++++++.
T Consensus 213 ~~~~sDiwS~Gvil~ellt~ 232 (299)
T d1ywna1 213 YTIQSDVWSFGVLLWEIFSL 232 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHTT
T ss_pred CCcccceeehHHHHHHHHhC
Confidence 78899999999999999873
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.8e-29 Score=244.09 Aligned_cols=206 Identities=17% Similarity=0.193 Sum_probs=127.8
Q ss_pred cccccccccEEEEEEEccCC----cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 134 SPIAAASLGQVYKAQLKYSG----QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g----~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
+.||+|+||.||+|.++.++ ..||||++++...+.... ..++++ +.+....|+|++++++
T Consensus 13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~--~~~~E~----~il~~l~H~nIv~~~g---------- 76 (283)
T d1mqba_ 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEA----GIMGQFSHHNIIRLEG---------- 76 (283)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHH--HHHHHH----HHHHTCCCTTBCCEEE----------
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHH--HHHHHH----HHHHhcCCCCEeeeeE----------
Confidence 67999999999999987544 479999987653321110 011111 1111122333333322
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
+.......++||||++++++.+.........+... .+..++..|+.|+|++
T Consensus 77 ---------------------------~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~ 129 (283)
T d1mqba_ 77 ---------------------------VISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 129 (283)
T ss_dssp ---------------------------EECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------EEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc
Confidence 12223567899999999998876544444455444 4557788899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~ 367 (487)
||+||||||+|||++.+|.+||+|||+++.+.......... ....+.+.+++++.+..+..++++|+||+|+.++++
T Consensus 130 ~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~---~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el 206 (283)
T d1mqba_ 130 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT---SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 206 (283)
T ss_dssp TCCCSCCCGGGEEECTTCCEEECCCCC--------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred ccccCccccceEEECCCCeEEEcccchhhcccCCCccceEe---ccCCCCccccCHHHHccCCCCCcccccccHHHHHHH
Confidence 99999999999999999999999999999876543222111 112233444555556677778899999999999999
Q ss_pred HHHhccCCCCcCcHHHHHH
Q 011399 368 FDDALNSSVSELNFKTIVD 386 (487)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~ 386 (487)
++... .+....+...+..
T Consensus 207 ~t~~~-~~~~~~~~~~~~~ 224 (283)
T d1mqba_ 207 MTYGE-RPYWELSNHEVMK 224 (283)
T ss_dssp HTTSC-CTTTTCCHHHHHH
T ss_pred HhCCC-CccccCCHHHHHH
Confidence 97322 2334444444443
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.7e-29 Score=243.15 Aligned_cols=187 Identities=15% Similarity=0.124 Sum_probs=117.3
Q ss_pred cccccccccEEEEEEEccC---CcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYS---GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~---g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|++..+ +..||||+++....+.... .+....+.+....|||++++++
T Consensus 13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~------~~~~E~~~l~~l~HpnIv~l~~----------- 75 (273)
T d1mp8a_ 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE------KFLQEALTMRQFDHPHIVKLIG----------- 75 (273)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHH------HHHHHHHHHHTCCCTTBCCEEE-----------
T ss_pred EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHH------HHHHHHHHHHhCCCCCEeeEEE-----------
Confidence 6799999999999998643 4579999886543221100 0111111111222444333322
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYG 288 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~g 288 (487)
.+ ..+..++||||++|+++.++.......++. ...+..++..|+.|+|++|
T Consensus 76 -------------------------~~--~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ 128 (273)
T d1mp8a_ 76 -------------------------VI--TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 128 (273)
T ss_dssp -------------------------EE--CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------EE--ecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC
Confidence 11 135678999999999998875544444554 3445678889999999999
Q ss_pred ccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 011399 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (487)
Q Consensus 289 ivH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~ 368 (487)
++||||||+||+++.+|.+||+|||+++.+......... ...+.+..++++....+..++++|+||+|+.+++++
T Consensus 129 iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~-----~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~l 203 (273)
T d1mp8a_ 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS-----KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203 (273)
T ss_dssp CCCSCCSGGGEEEEETTEEEECC------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHH
T ss_pred eeccccchhheeecCCCcEEEccchhheeccCCcceecc-----ceecCcccchhhHhccCCCCCccccccchHHHHHHH
Confidence 999999999999999999999999999887644221111 112234444555555666788899999999999998
Q ss_pred H
Q 011399 369 D 369 (487)
Q Consensus 369 ~ 369 (487)
+
T Consensus 204 t 204 (273)
T d1mp8a_ 204 M 204 (273)
T ss_dssp T
T ss_pred h
Confidence 6
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.1e-29 Score=246.46 Aligned_cols=206 Identities=17% Similarity=0.098 Sum_probs=129.2
Q ss_pred hcccCCcccccccccEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (487)
|+.+ +.||+|+||+||+|++..+|+ +||||.++........ +.+.+....+....|+|++++++
T Consensus 11 y~~~--~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~E~~~l~~l~HpnIv~l~g---- 78 (317)
T d1xkka_ 11 FKKI--KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEILDEAYVMASVDNPHVCRLLG---- 78 (317)
T ss_dssp EEEE--EEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTH------HHHHHHHHHHHHCCCTTBCCEEE----
T ss_pred CEEe--eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHH------HHHHHHHHHHHhCCCCCEeeEEE----
Confidence 4444 789999999999999987776 5888887643221100 00111111111122444333322
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHH
Q 011399 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSL 281 (487)
Q Consensus 204 ~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l 281 (487)
++ .....+++|||+.+++|.+.........+... .+..+++.|+
T Consensus 79 --------------------------------~~--~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl 124 (317)
T d1xkka_ 79 --------------------------------IC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 124 (317)
T ss_dssp --------------------------------EE--ESSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------EE--ecCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHH
Confidence 11 13556899999999999877555444555543 4567888999
Q ss_pred HHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 282 ~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
.|||++||+|||+||+|||++.++.+||+|||+++.+.......... ...+.+.+++++.+..+..++++|+||+|
T Consensus 125 ~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~----~~~gt~~y~APE~l~~~~~~~~sDvwS~G 200 (317)
T d1xkka_ 125 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWMALESILHRIYTHQSDVWSYG 200 (317)
T ss_dssp HHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC------------CCTTTSCHHHHHHCCCCHHHHHHHHH
T ss_pred HHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccccccccccc----ccccCccccChHHHhcCCCChhhhhhhHH
Confidence 99999999999999999999999999999999998765432211111 11123334444444556678899999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHH
Q 011399 362 PALRNFFDDALNSSVSELNFKTI 384 (487)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~ 384 (487)
+.++++++. ...|+...+...+
T Consensus 201 vil~el~t~-g~~p~~~~~~~~~ 222 (317)
T d1xkka_ 201 VTVWELMTF-GSKPYDGIPASEI 222 (317)
T ss_dssp HHHHHHHTT-SCCTTTTSCGGGH
T ss_pred HHHHHHHHC-CCCCCCCCCHHHH
Confidence 999999972 1234554444333
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.1e-28 Score=233.75 Aligned_cols=179 Identities=17% Similarity=0.183 Sum_probs=117.6
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHH-HHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~ 212 (487)
+.||+|+||.||+|++ .|+.||||+++..... .+..++ +.+....|+|++++++
T Consensus 13 ~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~~~~~~~~E~----------~~l~~l~HpnIv~~~g------------- 67 (262)
T d1byga_ 13 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEA----------SVMTQLRHSNLVQLLG------------- 67 (262)
T ss_dssp EEEEECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTH----------HHHTTCCCTTBCCEEE-------------
T ss_pred EEEecCCCeEEEEEEE--CCeEEEEEEECcHHHHHHHHHHH----------HHHHhCCCCCEeeEEE-------------
Confidence 6799999999999998 4889999999754211 111111 1111222444433322
Q ss_pred HHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh---cCCCHHHHHHHHHHHHHHHHHHCCc
Q 011399 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQLLEYGY 289 (487)
Q Consensus 213 ~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~lh~~gi 289 (487)
+..+.....++||||++||+|.++..... ........+..++..|+.|+|+.|+
T Consensus 68 -----------------------~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~i 124 (262)
T d1byga_ 68 -----------------------VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 124 (262)
T ss_dssp -----------------------EECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -----------------------EEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCce
Confidence 11122345689999999999998864332 2333445566888899999999999
Q ss_pred cccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 011399 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 290 vH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~ 369 (487)
+|||+||.|||++.+|.++++|||+++........ ..+ ...+..||. ..-+..++++|+||+|+.++|+++
T Consensus 125 vH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~-~~~---~~~y~aPE~-----l~~~~~t~~sDIwSfG~il~el~t 195 (262)
T d1byga_ 125 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKL---PVKWTAPEA-----LREKKFSTKSDVWSFGILLWEIYS 195 (262)
T ss_dssp CCSCCSGGGEEECTTSCEEECCCCC-------------C---CTTTSCHHH-----HHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred eccccchHhheecCCCCEeecccccceecCCCCcc-ccc---cccCCChHH-----HhCCCCChHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999876544221 111 123334443 344566889999999999999987
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=4.5e-29 Score=239.98 Aligned_cols=243 Identities=15% Similarity=0.132 Sum_probs=144.3
Q ss_pred cccccccccEEEEEEEcc-CC--cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKY-SG--QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-~g--~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||+||+|+++. ++ ..||||++.+.....- ... + +
T Consensus 14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~----~~~--------------------------~------~ 57 (273)
T d1u46a_ 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP----EAM--------------------------D------D 57 (273)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------C----HHH--------------------------H------H
T ss_pred EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCH----HHH--------------------------H------H
Confidence 579999999999998753 23 4799999865422110 000 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeec-CCCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (487)
|.+|+..+.++. +++ |.++|.- .....++||||++++++.+........++... .+..++..|+.|||++
T Consensus 58 ~~~Ei~~l~~l~-----H~n--Iv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~ 130 (273)
T d1u46a_ 58 FIREVNAMHSLD-----HRN--LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130 (273)
T ss_dssp HHHHHHHHHHCC-----CTT--BCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCC-----CCC--EEEEEEEEeecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC
Confidence 333333333321 222 1222221 12456899999999999887655444444443 4567888899999999
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~~ 366 (487)
||+||||||.||+++.++.+||+|||+++.+....... .... ..+.+..++++....+..++++|+||+|+.++|
T Consensus 131 ~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~----~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~e 206 (273)
T d1u46a_ 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH----RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 206 (273)
T ss_dssp TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC---------CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred CEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCc----cccCcccCCHHHHhCCCCCcchhhhhhHHHHHH
Confidence 99999999999999999999999999999875432110 0001 111122233334445556788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhhhhCCCCChHHhHhHHHHHHhccCCCHHH
Q 011399 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 446 (487)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~ 446 (487)
+++. ...|+.+.+...+...+.. .... |.. ....++.+
T Consensus 207 mlt~-G~~Pf~~~~~~~~~~~i~~----~~~~-----------------------~~~--------------~~~~~~~l 244 (273)
T d1u46a_ 207 MFTY-GQEPWIGLNGSQILHKIDK----EGER-----------------------LPR--------------PEDCPQDI 244 (273)
T ss_dssp HHTT-SCCTTTTCCHHHHHHHHHT----SCCC-----------------------CCC--------------CTTCCHHH
T ss_pred HHhC-CCCCCCCcCHHHHHHHHHh----CCCC-----------------------CCC--------------cccccHHH
Confidence 9972 2356666665554433321 1111 000 01235677
Q ss_pred HHHHHHHHhhcCccccccc
Q 011399 447 RDALVELLFKDGRFRHVLY 465 (487)
Q Consensus 447 r~~l~~~L~~d~~~r~~~~ 465 (487)
++.+.+|+..||+.|++..
T Consensus 245 ~~li~~cl~~dp~~RPt~~ 263 (273)
T d1u46a_ 245 YNVMVQCWAHKPEDRPTFV 263 (273)
T ss_dssp HHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHcCCChhHCcCHH
Confidence 7888888888888888643
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=9.1e-28 Score=233.93 Aligned_cols=205 Identities=16% Similarity=0.121 Sum_probs=128.0
Q ss_pred cccccccccEEEEEEEccCC-------cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSG-------QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g-------~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 206 (487)
+.||+|+||+||+|+...++ ..||||+++++..+.-..
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~----------------------------------- 63 (299)
T d1fgka_ 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS----------------------------------- 63 (299)
T ss_dssp EECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHH-----------------------------------
T ss_pred eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHH-----------------------------------
Confidence 68999999999999976443 479999998654322100
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh-----------------cCCCH
Q 011399 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-----------------QGLKV 269 (487)
Q Consensus 207 ~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-----------------~~~~~ 269 (487)
++..|...+.++ ..+++|.--.-+.......++||||++||+|.++..... .....
T Consensus 64 ---~~~~e~~~l~~~----~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~ 136 (299)
T d1fgka_ 64 ---DLISEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136 (299)
T ss_dssp ---HHHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHH
T ss_pred ---HHHHHHHHHHHh----cCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHH
Confidence 122222222222 123332211112233466799999999999998754321 11223
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 011399 270 LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349 (487)
Q Consensus 270 ~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (487)
...+..+++.|++|+|++|++||||||+|||++.+|.+||+|||+++........... ....+.+.+++++....+
T Consensus 137 ~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~l~~~ 212 (299)
T d1fgka_ 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT----TNGRLPVKWMAPEALFDR 212 (299)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCC----TTSCCGGGGSCHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhcccccccccccc----ccCCCChhhhhhhHhcCC
Confidence 4456688889999999999999999999999999999999999999877543211100 011122233444444556
Q ss_pred CCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 011399 350 FLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (487)
Q Consensus 350 ~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (487)
.+++++|+||+|++++++++.. ..++...+...+.
T Consensus 213 ~y~~k~DiwS~Gvvl~ell~~g-~~p~~~~~~~~~~ 247 (299)
T d1fgka_ 213 IYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELF 247 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTS-CCSSTTCCHHHHH
T ss_pred CCCchhhhHHhHHHHHHhccCC-CCCCCCCCHHHHH
Confidence 7789999999999999998621 2345555554433
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.94 E-value=5e-28 Score=236.04 Aligned_cols=211 Identities=16% Similarity=0.155 Sum_probs=139.1
Q ss_pred hcccCCcccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (487)
|+.+ +.||+|+||+||+|+.+ .+++.||||+++........
T Consensus 15 ~~~~--~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~-------------------------------- 60 (301)
T d1lufa_ 15 IEYV--RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ-------------------------------- 60 (301)
T ss_dssp CEEE--EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHH--------------------------------
T ss_pred cEEe--EEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHH--------------------------------
Confidence 5555 67999999999999975 25689999998754322110
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHh------------------
Q 011399 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES------------------ 264 (487)
Q Consensus 203 ~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~------------------ 264 (487)
+ +|.+|+..+.++ .++++.-..-++......+++|||+++++|.++.....
T Consensus 61 ~------~~~~E~~il~~l-----~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 129 (301)
T d1lufa_ 61 A------DFQREAALMAEF-----DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 129 (301)
T ss_dssp H------HHHHHHHHHHTC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC-----------------
T ss_pred H------HHHHHHHHHHhc-----CCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhc
Confidence 0 122333333222 12222222223344567899999999999988754211
Q ss_pred -----cCCC--HHHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcC
Q 011399 265 -----QGLK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRD 337 (487)
Q Consensus 265 -----~~~~--~~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~ 337 (487)
..++ ....+..++..|+.|+|+.|++||||||+|||++.++.+||+|||+++.+.+....... +...+.
T Consensus 130 ~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~----~~~~~~ 205 (301)
T d1lufa_ 130 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD----GNDAIP 205 (301)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC--------CCBC
T ss_pred cccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCcccccc----CCCCcC
Confidence 1122 23445678889999999999999999999999999999999999998766444221111 112233
Q ss_pred HHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHH
Q 011399 338 YEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGL 388 (487)
Q Consensus 338 ~~~~~~~~~~~g~~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l 388 (487)
+..++++.+..+..++++|+||+|+.++++++... .|+...+..++...+
T Consensus 206 ~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~-~p~~~~~~~e~~~~v 255 (301)
T d1lufa_ 206 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL-QPYYGMAHEEVIYYV 255 (301)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC-CTTTTSCHHHHHHHH
T ss_pred cCcCCHHHHccCCCChhhhhccchhhHHHHHccCC-CCCCCCCHHHHHHHH
Confidence 34455555556667889999999999999987422 356666666655544
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=7.2e-29 Score=242.97 Aligned_cols=203 Identities=14% Similarity=0.154 Sum_probs=129.5
Q ss_pred cccccccccEEEEEEEccCCc--EEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhc-ccCCHHHHHHHHHHHHHHHhc
Q 011399 134 SPIAAASLGQVYKAQLKYSGQ--IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELN 210 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~--~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~Eld 210 (487)
+.||+|+||.||+|+++.+|. .||||.++....+. +.+ .+.+..+.+... .|+|++++++
T Consensus 16 ~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~---~~~---~~~~E~~~l~~l~~HpnIv~~~~----------- 78 (309)
T d1fvra_ 16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHR---DFAGELEVLCKLGHHPNIINLLG----------- 78 (309)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------C---HHHHHHHHHTTCCCCTTBCCEEE-----------
T ss_pred EEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChH---HHH---HHHHHHHHHHhccCCCCEeeEEE-----------
Confidence 679999999999999987886 46777765432211 000 011111111111 2344333322
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHH---------------hcCCCH--HHHH
Q 011399 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---------------SQGLKV--LDLV 273 (487)
Q Consensus 211 ~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---------------~~~~~~--~~~~ 273 (487)
+....+..++||||++||+|.++.... ...++. ...+
T Consensus 79 --------------------------~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 132 (309)
T d1fvra_ 79 --------------------------ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 132 (309)
T ss_dssp --------------------------EEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHH
T ss_pred --------------------------EEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHH
Confidence 122245679999999999999875321 112333 3455
Q ss_pred HHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 011399 274 NTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSP 353 (487)
Q Consensus 274 ~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (487)
..+++.|+.|+|+.|++|||+||.|||++.++.+||+|||+++.......... ...+..+..||.+ ..+..++
T Consensus 133 ~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~--~~gt~~y~aPE~l-----~~~~~~~ 205 (309)
T d1fvra_ 133 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM--GRLPVRWMAIESL-----NYSVYTT 205 (309)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC------CCTTTCCHHHH-----HHCEECH
T ss_pred HHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccccccc--eecCCcccchHHh-----ccCCCCc
Confidence 68888999999999999999999999999999999999999987654322111 1112233445544 3455578
Q ss_pred CCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHH
Q 011399 354 DVDVTPIVPALRNFFDDALNSSVSELNFKTIVDG 387 (487)
Q Consensus 354 ~~Di~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~ 387 (487)
++|+||||+.+++++++. ..++...+...+...
T Consensus 206 ~sDvwSfGvil~ell~~~-~~p~~~~~~~~~~~~ 238 (309)
T d1fvra_ 206 NSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEK 238 (309)
T ss_dssp HHHHHHHHHHHHHHHTTS-CCTTTTCCHHHHHHH
T ss_pred cceeehhHHHHHHHHhcC-CCCCCCCCHHHHHHH
Confidence 899999999999998742 234556665555443
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.2e-28 Score=236.85 Aligned_cols=201 Identities=14% Similarity=0.110 Sum_probs=127.7
Q ss_pred HhhhcccCCcccccccccEEEEEEEccCC---cEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHH
Q 011399 125 DSIFSSISPSPIAAASLGQVYKAQLKYSG---QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (487)
Q Consensus 125 ~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g---~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (487)
+.+...|+ +.||+|+||+||+|++..++ ..||||+++...... +. ..+...++.+....|+|++++++
T Consensus 25 ~~~~~~~~-~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~---~~---~~~~~E~~~l~~l~HpnIv~~~g-- 95 (311)
T d1r0pa_ 25 SSLIVHFN-EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EV---SQFLTEGIIMKDFSHPNVLSLLG-- 95 (311)
T ss_dssp GGEEEEEE-EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHH---HH---HHHHHHHHHHHTCCCTTBCCCCE--
T ss_pred HHceeccc-eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHH---HH---HHHHHHHHHHHhCCCCCEeEEeE--
Confidence 33333444 56999999999999986433 369999986432111 11 11111111112223444444332
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHH--HHHHHHHHH
Q 011399 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQC 279 (487)
Q Consensus 202 ~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~ 279 (487)
...+.....++|||||+|++|.++........+.. ..+..++..
T Consensus 96 ----------------------------------~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~ 141 (311)
T d1r0pa_ 96 ----------------------------------ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141 (311)
T ss_dssp ----------------------------------EEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHH
T ss_pred ----------------------------------EEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHH
Confidence 11122345689999999999988754433334333 345678888
Q ss_pred HHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 011399 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (487)
Q Consensus 280 ~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~s 359 (487)
|+.|+|+.|++||||||.|||++.++.+||+|||+++.+.......... .....+.+..++++....+..++++|+||
T Consensus 142 gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDI~S 219 (311)
T d1r0pa_ 142 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN--KTGAKLPVKWMALESLQTQKFTTKSDVWS 219 (311)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC--TTCSSCCGGGSCHHHHHHCCCCHHHHHHH
T ss_pred hhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcccccccccee--cccccccccccChHHHhcCCCCChhHhhh
Confidence 9999999999999999999999999999999999998775432110000 00011223333444445566788899999
Q ss_pred HHHHHHHHHHH
Q 011399 360 IVPALRNFFDD 370 (487)
Q Consensus 360 l~~~l~~~~~~ 370 (487)
+|+.++++++.
T Consensus 220 fGivl~El~t~ 230 (311)
T d1r0pa_ 220 FGVLLWELMTR 230 (311)
T ss_dssp HHHHHHHHHTT
T ss_pred hHHHHHHHHHC
Confidence 99999999974
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2e-27 Score=232.48 Aligned_cols=205 Identities=15% Similarity=0.073 Sum_probs=135.1
Q ss_pred cccccccccEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|+++. +++.||||+++...... +.. .+.+.++.+....|+|++.+.+
T Consensus 26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~---~~~---~~~~E~~il~~l~h~nIv~~~~--------- 90 (308)
T d1p4oa_ 26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERI---EFLNEASVMKEFNCHHVVRLLG--------- 90 (308)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHH---HHH---HHHHHHHHGGGCCCTTBCCEEE---------
T ss_pred eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChH---HHH---HHHHHHHHHHHcCCCCEeeeee---------
Confidence 679999999999999852 46899999987542211 100 0111111111222333332222
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc---------CCCHH--HHHHHHH
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------GLKVL--DLVNTGI 277 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------~~~~~--~~~~~~i 277 (487)
+.......++||||+++|+|.++...... ..+.. ..+..++
T Consensus 91 ----------------------------~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i 142 (308)
T d1p4oa_ 91 ----------------------------VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 142 (308)
T ss_dssp ----------------------------EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHH
T ss_pred ----------------------------EEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHH
Confidence 22334677999999999999887543221 12333 3456788
Q ss_pred HHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 011399 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (487)
Q Consensus 278 ~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di 357 (487)
+.|+.|||+.+|+|||+||.|||++.++.+||+|||+++.+........ .....+.++.++++....+..++++|+
T Consensus 143 a~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~----~~~~~~t~~y~aPe~l~~~~~~~~~Dv 218 (308)
T d1p4oa_ 143 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDV 218 (308)
T ss_dssp HHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEG----GGSSEECGGGCCHHHHHHCCCCHHHHH
T ss_pred HHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcceee----ccceecccccCCHHHHccCCCCccccc
Confidence 8899999999999999999999999999999999999987654321100 011223455555666666777888999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHH
Q 011399 358 TPIVPALRNFFDDALNSSVSELNFKTIVD 386 (487)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~ 386 (487)
||+|+.++++++.. ..++...+...+..
T Consensus 219 ~S~G~il~El~t~~-~~p~~~~~~~~~~~ 246 (308)
T d1p4oa_ 219 WSFGVVLWEIATLA-EQPYQGLSNEQVLR 246 (308)
T ss_dssp HHHHHHHHHHHHTS-CCTTTTSCHHHHHH
T ss_pred ccHHHHHHHHHhCC-CCCCCCCCHHHHHH
Confidence 99999999999742 24555555554443
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7.8e-27 Score=228.54 Aligned_cols=190 Identities=15% Similarity=0.110 Sum_probs=131.6
Q ss_pred cccccccccEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Q 011399 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~E 208 (487)
+.||+|+||.||+|+++ .+++.||||++++.....- .
T Consensus 29 ~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~--------------------------------------~ 70 (311)
T d1t46a_ 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE--------------------------------------R 70 (311)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH--------------------------------------H
T ss_pred eEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHH--------------------------------------H
Confidence 67999999999999874 3568999999976522110 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhc-----------------CCC--H
Q 011399 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-----------------GLK--V 269 (487)
Q Consensus 209 ld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-----------------~~~--~ 269 (487)
..+.+|+..+.++ .++++|.--.-+.......+++||||+|++|.++...... ..+ .
T Consensus 71 ~~~~~E~~~~~~l----~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 146 (311)
T d1t46a_ 71 EALMSELKVLSYL----GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146 (311)
T ss_dssp HHHHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHH
T ss_pred HHHHHHHHHHHhc----cCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHH
Confidence 1133333333332 2344432111122334567999999999999887543211 123 3
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 011399 270 LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349 (487)
Q Consensus 270 ~~~~~~~i~~~l~~lh~~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (487)
...+..++..|+.|||++|++||||||+||+++.++.++++|||+++.+......... ....+.+..++++...-+
T Consensus 147 ~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~ 222 (311)
T d1t46a_ 147 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK----GNARLPVKWMAPESIFNC 222 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEEC----SSSEECGGGCCHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCcceEe----eecccChHHcCHHHhcCC
Confidence 4456688999999999999999999999999999999999999999877543211100 112344555666666677
Q ss_pred CCCCCCCcchHHHHHHHHHH
Q 011399 350 FLSPDVDVTPIVPALRNFFD 369 (487)
Q Consensus 350 ~~~~~~Di~sl~~~l~~~~~ 369 (487)
..++++|+||+|+.++++++
T Consensus 223 ~~~~~~DIwS~G~~l~ellt 242 (311)
T d1t46a_ 223 VYTFESDVWSYGIFLWELFS 242 (311)
T ss_dssp CCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCcccccchHHHHHHHHh
Confidence 78999999999999999997
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=9.4e-28 Score=234.23 Aligned_cols=191 Identities=16% Similarity=0.112 Sum_probs=120.2
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++ +|+.||||+++....+.. +++ ..+..+....|+|++++++.+
T Consensus 9 ~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~------~~e--~ei~~~~~~~HpnIv~~~~~~------------ 66 (303)
T d1vjya_ 9 ESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSW------FRE--AEIYQTVMLRHENILGFIAAD------------ 66 (303)
T ss_dssp EEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHH------HHH--HHHHTSTTCCCTTBCCEEEEE------------
T ss_pred EEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHH------HHH--HHHHHHhhCCCCcCcceEEEE------------
Confidence 6799999999999997 699999999864422211 111 011111223355554433211
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecC--CCCceEEEeecCCCCcCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHH---
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLE--- 286 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~--- 286 (487)
+.+. ....++||||+++++|.++... .+.+... .+..+++.++.|+|.
T Consensus 67 -----------------------~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--~~l~~~~~~~~~~~ia~gl~~lH~~~~ 121 (303)
T d1vjya_ 67 -----------------------NKDNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIV 121 (303)
T ss_dssp -----------------------EEECSSSEEEEEEEECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred -----------------------EeCCCcceEEEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1111 1246899999999999998543 4444433 456778889999996
Q ss_pred -----CCccccCCCCCCeEEcCCCcEEEEecCCCCCCCHHHHH---HHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCc
Q 011399 287 -----YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF---AIIGHVVHMVNRDYEAMARDYYA-LDFLSPDVDV 357 (487)
Q Consensus 287 -----~givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~Di 357 (487)
.||+||||||+|||++.+|.+||+|||+++.+...... .......+..+..||.+...... .+..+.++|+
T Consensus 122 ~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di 201 (303)
T d1vjya_ 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 201 (303)
T ss_dssp STTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHH
T ss_pred hhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhh
Confidence 59999999999999999999999999999876432100 00111112333344433210000 0012456799
Q ss_pred chHHHHHHHHHHHh
Q 011399 358 TPIVPALRNFFDDA 371 (487)
Q Consensus 358 ~sl~~~l~~~~~~~ 371 (487)
||+|+.+++++++.
T Consensus 202 ~S~Gvvl~el~tg~ 215 (303)
T d1vjya_ 202 YAMGLVFWEIARRC 215 (303)
T ss_dssp HHHHHHHHHHHHTB
T ss_pred hhhHHHHHHHhhCC
Confidence 99999999999853
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.92 E-value=1.4e-26 Score=225.49 Aligned_cols=196 Identities=14% Similarity=0.118 Sum_probs=125.0
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 207 (487)
|+-. +.||+|+||.||+|+++.+|+.||||+.+..... .
T Consensus 9 Y~l~--~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------------------------~--------------- 47 (299)
T d1ckia_ 9 YRLG--RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------------------------P--------------- 47 (299)
T ss_dssp EEEE--EEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS------------------------C---------------
T ss_pred EEEe--EEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC------------------------H---------------
Confidence 4444 7899999999999999889999999998643111 0
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHH
Q 011399 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLL 285 (487)
Q Consensus 208 Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh 285 (487)
.+..|++.+.+ +.+++.+..-..+....+..++||||+.| ++.+.........+. ...+..++..||+|+|
T Consensus 48 --~~~~E~~i~~~----l~~~~~i~~~~~~~~~~~~~~ivme~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH 120 (299)
T d1ckia_ 48 --QLHIESKIYKM----MQGGVGIPTIRWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120 (299)
T ss_dssp --CHHHHHHHHHH----STTSTTCCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHH----ccCCCcccEEEEEEecCCEEEEEEEEcCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH
Confidence 01222222222 22333333333334445667899999965 554443333333443 4455577888999999
Q ss_pred HCCccccCCCCCCeEEcC---CCcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 011399 286 EYGYFHADPHPGNLLATP---EGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~---~g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~ 361 (487)
++||+||||||+|||++. ++.++++|||+++.+.......... .......+++..++++...-...++++|+||+|
T Consensus 121 ~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 200 (299)
T d1ckia_ 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLG 200 (299)
T ss_dssp HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHH
T ss_pred HCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecC
Confidence 999999999999999874 4579999999998764321100000 000001123344444444444467889999999
Q ss_pred HHHHHHHHHh
Q 011399 362 PALRNFFDDA 371 (487)
Q Consensus 362 ~~l~~~~~~~ 371 (487)
+.+++++++.
T Consensus 201 ~~l~el~tg~ 210 (299)
T d1ckia_ 201 YVLMYFNLGS 210 (299)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHhCC
Confidence 9999999853
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=8.3e-27 Score=232.96 Aligned_cols=290 Identities=14% Similarity=0.084 Sum_probs=159.7
Q ss_pred hcccCCcccccccccEEEEEEEccCCcEEEEEEecCChH--HHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Q 011399 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE--EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (487)
Q Consensus 128 f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~--~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 205 (487)
|+-+ +.||+|+||+||+|+++.+|+.||||+++.... +....++.+++.+. |++.....
T Consensus 15 Y~i~--~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~----------~~~~~~~~------- 75 (362)
T d1q8ya_ 15 YILV--RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVN----------DADNTKED------- 75 (362)
T ss_dssp EEEE--EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHH----------HTCCSHHH-------
T ss_pred EEEE--EEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhc----------chhhhhhh-------
Confidence 4444 789999999999999988999999999986521 22222222222222 11111100
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCeEeceeee----cCCCCceEEEeecCCCCcCcHHHHH--hcCC--CHHHHHHHHH
Q 011399 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFW----DYTSGKVLTMEWVEGVKLNEQVAIE--SQGL--KVLDLVNTGI 277 (487)
Q Consensus 206 ~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~----~~~~~~~LvmE~~~G~~L~~~~~~~--~~~~--~~~~~~~~~i 277 (487)
...+++ +.+++. ......+++|+++.+.......... .... .....+..++
T Consensus 76 -------------------~~~~~~--iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qi 134 (362)
T d1q8ya_ 76 -------------------SMGANH--ILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 134 (362)
T ss_dssp -------------------HHHHTT--BCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHH
T ss_pred -------------------hcCcCc--eEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHH
Confidence 000111 222221 1223446777777665433222121 1122 3445667889
Q ss_pred HHHHHHHHH-CCccccCCCCCCeEEcCCC------cEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 011399 278 QCSLRQLLE-YGYFHADPHPGNLLATPEG------KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF 350 (487)
Q Consensus 278 ~~~l~~lh~-~givH~Dlkp~Nili~~~g------~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (487)
+.|+.|+|+ .||+|||+||+|||++.+| .++++|||.+........ .. ..+..+..|| ....+-
T Consensus 135 l~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~-~~---~gt~~y~aPE-----~~~~~~ 205 (362)
T d1q8ya_ 135 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT-NS---IQTREYRSPE-----VLLGAP 205 (362)
T ss_dssp HHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCC-SC---CSCGGGCCHH-----HHHTCC
T ss_pred HHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccccc-cc---cccccccChh-----hccccC
Confidence 999999998 9999999999999998665 399999999986643311 01 1122334444 344455
Q ss_pred CCCCCCcchHHHHHHHHHHHhccCCCCcCcH------HHHHHHHHHHHhhCCCCCChHHHHHHHHHHH---HHHhhhhhC
Q 011399 351 LSPDVDVTPIVPALRNFFDDALNSSVSELNF------KTIVDGLGAVLYQYPFNVPAYYALILRSLTV---LEGLALYAD 421 (487)
Q Consensus 351 ~~~~~Di~sl~~~l~~~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~---leg~~~~ld 421 (487)
.++++|+||+|+.+.+++++.. ++...+. ...+......+. ..|.+...-.+.... ..+......
T Consensus 206 ~~~~~DiwSlG~il~el~~g~~--pF~~~~~~~~~~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (362)
T d1q8ya_ 206 WGCGADIWSTACLIFELITGDF--LFEPDEGHSYTKDDDHIAQIIELLG----ELPSYLLRNGKYTRTFFNSRGLLRNIS 279 (362)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSC--CC---------CHHHHHHHHHHHHC----SCCHHHHHHCTTHHHHBCC--CBSSCC
T ss_pred CCccccccchHHHHHHHHHCCC--CCCCCccccccchhHHHHHHHHHhC----CCCHHHhhcccccccccccchhhhccc
Confidence 5889999999999999998543 3322211 111111111111 123332111100000 000000000
Q ss_pred CCCChHHhHhHHHHHHh--ccCCCHHHHHHHHHHHhhcCcccccccchhhccccc
Q 011399 422 PNFKVLAASYPYFAKRL--LTDPNPYLRDALVELLFKDGRFRHVLYSPFTINLVD 474 (487)
Q Consensus 422 P~~~~~~~~~p~~~~~l--~~~~~p~~r~~l~~~L~~d~~~r~~~~~~~~~~~~~ 474 (487)
..... .......... ....++++++++.+||..||.+|++..+.+.|+||+
T Consensus 280 -~~~~~-~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~ 332 (362)
T d1q8ya_ 280 -KLKFW-PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 332 (362)
T ss_dssp -CCCBC-CHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGT
T ss_pred -cccCC-chhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccC
Confidence 00000 0111111111 112467889999999999999999999999999997
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.92 E-value=8.5e-26 Score=219.19 Aligned_cols=231 Identities=15% Similarity=0.148 Sum_probs=140.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
+.||+|+||+||+|++..+|+.||||+....... . .+..
T Consensus 11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------------------------~-----------------~~~~ 49 (293)
T d1csna_ 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA------------------------P-----------------QLRD 49 (293)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS------------------------C-----------------CHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEccccCc------------------------H-----------------HHHH
Confidence 6899999999999999989999999998533110 0 0112
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~givH 291 (487)
|.+.+..+ .+.+++..-.-+.......++||||+ |++|.+.........+. ...+..++..++.++|+.||+|
T Consensus 50 e~~~~~~l----~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiH 124 (293)
T d1csna_ 50 EYRTYKLL----AGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 124 (293)
T ss_dssp HHHHHHHT----TTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHh----cCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCcee
Confidence 22222222 22233222222334456779999999 56887775443333443 3456678888999999999999
Q ss_pred cCCCCCCeEEcC-----CCcEEEEecCCCCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 011399 292 ADPHPGNLLATP-----EGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (487)
Q Consensus 292 ~Dlkp~Nili~~-----~g~i~l~DFGla~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~l~ 365 (487)
||+||+|||++. ++.++|+|||+++.+.......... .......+++..++++.+.....++++|+||+|+.++
T Consensus 125 rDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~ 204 (293)
T d1csna_ 125 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFM 204 (293)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHH
Confidence 999999999974 5789999999998654321000000 0000012334444444444445678899999999999
Q ss_pred HHHHHhccCCC-CcCcHHHHHHHHHHH-----HhhCCCCCChHHHHHHHHH
Q 011399 366 NFFDDALNSSV-SELNFKTIVDGLGAV-----LYQYPFNVPAYYALILRSL 410 (487)
Q Consensus 366 ~~~~~~~~~~~-~~~~~~~~~~~l~~~-----~~~~~~~~p~~~~~l~r~l 410 (487)
+++++..+... ...+.......+... ..+....+|+++..++..+
T Consensus 205 elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~ 255 (293)
T d1csna_ 205 YFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYA 255 (293)
T ss_dssp HHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred HHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHH
Confidence 99985433221 122222222222221 1223345777776665544
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=9.5e-24 Score=191.51 Aligned_cols=183 Identities=17% Similarity=0.206 Sum_probs=111.3
Q ss_pred cccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHhcHHH
Q 011399 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (487)
Q Consensus 134 ~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~ 213 (487)
++||+|+||+||+|++. +|+.||||+++++...... ....+ ......... . .......
T Consensus 6 ~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~--~~~~~----------~~~~~~~~~---~------~~~~~~~ 63 (191)
T d1zara2 6 KLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKK--VKEKR----------DYGDLHFSV---L------AIRSARN 63 (191)
T ss_dssp EEEEECSSEEEEEEEET-TTEEEEEEEECC------C--CCC-----------------CHHH---H------HHHHHHH
T ss_pred CEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhh--hhhhh----------hhccHHHHH---H------HHHHHHH
Confidence 67999999999999987 8999999999876432100 00000 000011110 1 1112334
Q ss_pred HHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCcCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccccC
Q 011399 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (487)
Q Consensus 214 Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~givH~D 293 (487)
|..++.++. ++.+|..+.. ...+++|||++|..+.++ .......+..++..++.++|++||+|||
T Consensus 64 e~~~l~~l~-------~~~v~~~~~~--~~~~lvme~~~~~~~~~l------~~~~~~~i~~ql~~~l~~lH~~giiHrD 128 (191)
T d1zara2 64 EFRALQKLQ-------GLAVPKVYAW--EGNAVLMELIDAKELYRV------RVENPDEVLDMILEEVAKFYHRGIVHGD 128 (191)
T ss_dssp HHHHHHHTT-------TSSSCCEEEE--ETTEEEEECCCCEEGGGC------CCSCHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHHHcc-------CCCcceEEEe--cCCEEEEEeeccccccch------hhHHHHHHHHHHHHHHHHHhhCCEEEcc
Confidence 555555442 3446666543 445899999999766543 2333445667888999999999999999
Q ss_pred CCCCCeEEcCCCcEEEEecCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 011399 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (487)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Di~sl~~~ 363 (487)
|||+|||++++ .++|+|||++...+......+ ..+|...+.. ++.-.| +.++|+||+...
T Consensus 129 iKP~NILv~~~-~~~liDFG~a~~~~~~~~~~~-------l~rd~~~~~~-~f~r~y-~~~~d~~s~~~~ 188 (191)
T d1zara2 129 LSQYNVLVSEE-GIWIIDFPQSVEVGEEGWREI-------LERDVRNIIT-YFSRTY-RTEKDINSAIDR 188 (191)
T ss_dssp CSTTSEEEETT-EEEECCCTTCEETTSTTHHHH-------HHHHHHHHHH-HHHHHH-CCCCCHHHHHHH
T ss_pred CChhheeeeCC-CEEEEECCCcccCCCCCcHHH-------HHHHHHHHHH-HHcCCC-CCcccHHHHHHH
Confidence 99999999864 599999999988764322211 1222222222 111111 567799986443
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.74 E-value=8.9e-09 Score=95.25 Aligned_cols=142 Identities=12% Similarity=0.104 Sum_probs=84.9
Q ss_pred cCCccccccc-ccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHh
Q 011399 131 ISPSPIAAAS-LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (487)
Q Consensus 131 ~~~~~ig~Gs-~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~El 209 (487)
.+-++++.|. -++||+.... +|..+++|..+++....+
T Consensus 13 ~~~~~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~~~~~l---------------------------------------- 51 (255)
T d1nd4a_ 13 YDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGALNEL---------------------------------------- 51 (255)
T ss_dssp CEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSCTTSCH----------------------------------------
T ss_pred CceEEcCCcccCCeEEEEEeC-CCCEEEEEeCCccCHhHH----------------------------------------
Confidence 3346777765 4799999876 788899999887643322
Q ss_pred cHHHHHHHHHHHHHHhCCCCCeEeceeee--cCCCCceEEEeecCCCCcCcHH---------------HHHhcC------
Q 011399 210 NYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQV---------------AIESQG------ 266 (487)
Q Consensus 210 d~~~Ea~~~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~---------------~~~~~~------ 266 (487)
..|+..+..+.. ..+.+|+++. ...+..+++|||++|.++.+.. .++...
T Consensus 52 --~~E~~~l~~L~~-----~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~ 124 (255)
T d1nd4a_ 52 --QDEAARLSWLAT-----TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPF 124 (255)
T ss_dssp --HHHHHHHHHHHT-----TTCCBCCEEEEEECSSCEEEEEECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCC
T ss_pred --HHHHHHHHHHHh-----cCCCCCceeeecccccceEEEEEeeeccccccccccHHHHHHHHHHHHHHHccCChhhCCC
Confidence 223333332321 2467899875 3345678999999998775410 011100
Q ss_pred -CCHHHHHHHH----------------------HHHHHHHHHH-------CCccccCCCCCCeEEcCCCcEEEEecCCCC
Q 011399 267 -LKVLDLVNTG----------------------IQCSLRQLLE-------YGYFHADPHPGNLLATPEGKLAFLDFGMMS 316 (487)
Q Consensus 267 -~~~~~~~~~~----------------------i~~~l~~lh~-------~givH~Dlkp~Nili~~~g~i~l~DFGla~ 316 (487)
.......... ....+..+.. ..++|+|+||+|||+++++.+.|+||+.+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 125 DHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp BCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 0111000000 1112333333 238999999999999876667899999987
Q ss_pred CCCH
Q 011399 317 ETPE 320 (487)
Q Consensus 317 ~l~~ 320 (487)
.-++
T Consensus 205 ~g~~ 208 (255)
T d1nd4a_ 205 VADR 208 (255)
T ss_dssp EEET
T ss_pred cCCH
Confidence 6443
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.39 E-value=1.2e-06 Score=86.32 Aligned_cols=114 Identities=19% Similarity=0.196 Sum_probs=60.4
Q ss_pred CCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHH
Q 011399 104 LPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLI 183 (487)
Q Consensus 104 ~~~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~dl~~l~~~~~~~ 183 (487)
..|+..+.+... ...+|.-.+. ..++-++||.|....||+.....+|+.|+||.-.|..+..-
T Consensus 5 ~e~Lt~~~~~~l-a~~lg~~~~~--~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g-------------- 67 (392)
T d2pula1 5 YETLNESSAVAL-AVKLGLFPSK--STLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVG-------------- 67 (392)
T ss_dssp CCCCCHHHHHHH-HHHTTC-------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC----------------
T ss_pred CccCCHHHHHHH-HHHcCCCCCC--CCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccC--------------
Confidence 345554444443 3345542111 23344789999999999999876788999997765432110
Q ss_pred hhhhhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCeEeceeeecCCCCceEEEeecCCCCc
Q 011399 184 NKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKL 256 (487)
Q Consensus 184 ~~~~~~~~~~i~~~~~~~~~~l~~Eld~~~Ea~~~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L 256 (487)
......+... ..|++.+..+. ......+|++|.......+++||+++|..+
T Consensus 68 ----~~~~~~~~R~--------------~~E~~~L~~~~----~~~p~~vP~v~~~d~~~~~lvmE~L~~~~~ 118 (392)
T d2pula1 68 ----ESWPLTIDRA--------------RIESSALIRQG----EHVPHLVPRVFYSDTEMAVTVMEDLSHLKI 118 (392)
T ss_dssp ----CCCCCCTTHH--------------HHHHHHHHHHH----TTCGGGSCCEEEEETTTTEEEECCCTTSEE
T ss_pred ----CCCCCCHHHH--------------HHHHHHHHHhh----hhCCCCcceEEEEcCCCCEEEEeccCCccc
Confidence 0000011111 11232222222 223346899987767778999999988654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=98.22 E-value=1.2e-06 Score=83.96 Aligned_cols=52 Identities=23% Similarity=0.327 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHHhCCCHHhhhcccCCcccccccccEEEEEEEccCCcEEEEEEecCCh
Q 011399 106 TFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGI 165 (487)
Q Consensus 106 ~~~~~~~~~~i~~~lg~~~~~~f~~~~~~~ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~ 165 (487)
.++.+.+...++. +|-..+.. + .+++ +.--+||+++.. +|+.|++|+.+|+.
T Consensus 7 ~L~pd~i~~al~~-~g~~~~~~---~--~~L~-s~EN~vy~v~~~-dg~~~VlK~~rp~~ 58 (325)
T d1zyla1 7 TLHPDTIMDALFE-HGIRVDSG---L--TPLN-SYENRVYQFQDE-DRRRFVVKFYRPER 58 (325)
T ss_dssp CCCHHHHHHHHHH-TTCCCCSC---C--EEEC-CSSSEEEEECCT-TCCCEEEEEECTTT
T ss_pred ccCHHHHHHHHHH-cCCCCCcC---c--cccc-cccceeEEEEcC-CCCEEEEEEeCCCC
Confidence 3456666666554 45433221 1 2342 234699999987 89999999999973
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.21 E-value=1.1e-06 Score=81.01 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=27.8
Q ss_pred CccccCCCCCCeEEcCCCcEEEEecCCCCCCCH
Q 011399 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (487)
Q Consensus 288 givH~Dlkp~Nili~~~g~i~l~DFGla~~l~~ 320 (487)
.++|+|+||+|||+++++.+.|+||+.++.-++
T Consensus 184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g~~ 216 (263)
T d1j7la_ 184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADK 216 (263)
T ss_dssp EEECSCCCTTSEEEETTEEEEECCCTTCEEEEH
T ss_pred EEEEeeccCcceeecCCceEEEeechhcccCCH
Confidence 489999999999998766678999999986443
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.61 E-value=9.2e-05 Score=69.79 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=28.5
Q ss_pred HCCccccCCCCCCeEEcCCCcEEEEecCCCCC
Q 011399 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317 (487)
Q Consensus 286 ~~givH~Dlkp~Nili~~~g~i~l~DFGla~~ 317 (487)
..|++|+|++++|++++.++...++||+.+..
T Consensus 182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 182 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccccCCcchhhhhcccccceeEeccccccc
Confidence 36899999999999999887779999999875
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.01 E-value=0.001 Score=64.66 Aligned_cols=53 Identities=17% Similarity=0.160 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCCHHhh-hcccCCcccccccccEEEEEEEcc-------CCcEEEEEEec
Q 011399 110 AEAFSCIERELGLTLDSI-FSSISPSPIAAASLGQVYKAQLKY-------SGQIVAVKVQR 162 (487)
Q Consensus 110 ~~~~~~i~~~lg~~~~~~-f~~~~~~~ig~Gs~gqV~~a~~~~-------~g~~VAVKv~~ 162 (487)
+.++.++.+.++..|..+ -+.+.-++|+.|---++|++.... .++.|++++.-
T Consensus 23 ~~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g 83 (395)
T d1nw1a_ 23 ERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF 83 (395)
T ss_dssp HHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC
T ss_pred HHHHHHHHHhCcccccCCCccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC
Confidence 445666667787766552 123444789989999999998752 24567777753
|