Query 011402
Match_columns 486
No_of_seqs 255 out of 1900
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 07:24:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011402.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011402hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 1.4E-59 4.9E-64 472.5 28.8 306 70-433 52-370 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 1.5E-59 5.1E-64 473.2 23.0 303 70-433 57-383 (383)
3 1tzs_A Cathepsin E; hydrolase, 100.0 2E-58 7E-63 462.0 28.7 317 61-443 14-350 (351)
4 3vla_A EDGP; extracellular, in 100.0 4E-58 1.4E-62 467.7 27.7 347 59-433 8-399 (413)
5 2qzx_A Candidapepsin-5; aspart 100.0 5.3E-58 1.8E-62 457.7 27.8 306 72-444 10-340 (342)
6 1j71_A Candidapepsin, aspartic 100.0 8.4E-58 2.9E-62 454.6 29.1 302 72-443 10-332 (334)
7 2apr_A Rhizopuspepsin; hydrola 100.0 6.8E-58 2.3E-62 453.3 27.7 298 71-433 12-324 (325)
8 3fv3_A SAPP1P-secreted asparti 100.0 1.8E-57 6.2E-62 453.5 28.0 303 72-443 10-337 (339)
9 3pvk_A Candidapepsin-2; hydrol 100.0 1.7E-57 5.8E-62 454.3 27.2 307 72-444 10-340 (342)
10 1am5_A Pepsin, acid proteinase 100.0 1.2E-57 4.2E-62 451.6 25.5 302 70-433 8-324 (324)
11 3cms_A Chymosin B; hydrolase, 100.0 7.7E-58 2.6E-62 452.7 22.7 300 70-433 10-323 (323)
12 1dpj_A Proteinase A; proteinas 100.0 5.4E-57 1.9E-61 447.9 28.3 302 70-433 9-329 (329)
13 1mpp_A Pepsin; hydrolase(acid 100.0 3.8E-57 1.3E-61 454.8 27.1 305 70-435 14-357 (361)
14 4aa9_A Chymosin; hydrolase, as 100.0 2.7E-57 9.1E-62 448.7 24.7 300 70-433 7-320 (320)
15 1htr_B Gastricsin; aspartyl pr 100.0 1E-56 3.6E-61 445.9 27.5 304 71-433 9-329 (329)
16 3k1w_A Renin; protease, altern 100.0 9E-57 3.1E-61 448.9 23.2 306 70-433 14-340 (341)
17 3c9x_A Trichoderma reesei aspa 100.0 1.2E-56 4.1E-61 445.1 23.6 299 71-432 12-329 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 1.5E-56 5.3E-61 444.4 23.9 297 72-432 13-329 (329)
19 1qdm_A Prophytepsin; aspartic 100.0 5.6E-56 1.9E-60 458.9 28.2 312 70-432 48-477 (478)
20 2ewy_A Beta-secretase 2; BACE2 100.0 1.3E-55 4.4E-60 447.3 28.6 323 72-445 11-367 (383)
21 2qp8_A Beta-secretase 1; BACE1 100.0 2E-55 6.7E-60 447.5 29.5 321 72-444 19-378 (395)
22 1miq_A Plasmepsin; aspartic pr 100.0 3.2E-56 1.1E-60 448.9 23.4 295 70-433 58-374 (375)
23 3lpj_A Beta-secretase 1; alzhe 100.0 1.5E-55 5.3E-60 455.8 29.0 313 72-435 72-422 (455)
24 3vf3_A Beta-secretase 1; struc 100.0 2.7E-55 9.1E-60 447.7 29.6 321 72-443 26-384 (402)
25 3aup_A SBG7S, BG, basic 7S glo 100.0 5.3E-55 1.8E-59 445.1 30.2 344 60-434 10-394 (403)
26 3qvc_A Histo-aspartic protease 100.0 3.6E-55 1.2E-59 448.9 25.2 295 70-433 133-449 (451)
27 1yg9_A Aspartic protease BLA G 100.0 2.9E-55 1E-59 435.2 23.2 297 70-433 13-329 (330)
28 2bju_A Plasmepsin II; aspartic 100.0 2.1E-55 7.1E-60 450.0 20.7 297 70-434 134-451 (453)
29 1ibq_A Aspergillopepsin; aspar 100.0 2.2E-54 7.5E-59 428.2 25.1 296 72-433 12-325 (325)
30 1izd_A Aspartic proteinase; su 100.0 2E-54 6.7E-59 428.0 23.9 295 72-433 13-323 (323)
31 1t6e_X Xylanase inhibitor; two 100.0 1.4E-53 4.7E-58 431.5 29.2 328 70-434 10-374 (381)
32 1bxo_A Protein (penicillopepsi 100.0 2.4E-54 8.1E-59 427.6 20.0 293 72-433 13-323 (323)
33 1wkr_A Polyporopepsin; hydrola 100.0 5.5E-53 1.9E-57 421.0 27.3 289 73-435 11-335 (340)
34 1b5f_A Protein (cardosin A); h 100.0 8.2E-43 2.8E-47 329.7 16.1 216 70-333 9-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 7.7E-38 2.6E-42 296.5 19.6 219 194-433 5-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.2E-22 4.2E-27 162.4 8.2 84 70-183 9-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 1.6E-17 5.5E-22 130.4 7.5 81 345-433 3-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 95.4 0.017 5.9E-07 48.9 5.1 109 277-431 23-134 (148)
39 2i1a_A DNA damage-inducible pr 95.3 0.029 9.8E-07 47.5 6.2 108 277-430 25-134 (148)
40 2i1a_A DNA damage-inducible pr 92.4 0.12 4E-06 43.6 4.4 31 72-104 23-53 (148)
41 2hs1_A HIV-1 protease; ultra-h 86.7 0.76 2.6E-05 35.6 4.4 28 77-106 10-37 (99)
42 1fmb_A EIAV protease; hydrolas 84.9 0.85 2.9E-05 35.8 3.9 27 76-104 9-35 (104)
43 3ec0_A Protease; HIV-2, inhibi 84.0 1.2 4.1E-05 34.5 4.4 28 77-106 10-37 (99)
44 3liy_A Protease; hydrolase, hy 83.4 0.98 3.3E-05 35.7 3.6 31 77-107 12-45 (116)
45 2hah_A Protease, retropepsin; 75.9 2.3 8E-05 33.9 3.7 26 77-105 16-41 (116)
46 3sqf_A Protease; folded monome 73.6 3.3 0.00011 32.8 4.0 28 77-106 11-38 (114)
47 3s8i_A Protein DDI1 homolog 1; 73.3 2.8 9.5E-05 35.1 3.7 31 73-105 22-52 (148)
48 3slz_A GAG-Pro-POL polyprotein 66.0 6.7 0.00023 32.0 4.4 31 74-106 21-51 (132)
49 2rsp_A RSV protease; hydrolase 58.5 9.1 0.00031 30.8 3.8 23 82-106 27-49 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 56.6 8.9 0.0003 33.7 3.8 27 76-104 9-35 (203)
51 1lya_A Cathepsin D; lysosomal 47.0 17 0.0006 27.6 3.7 15 308-322 30-44 (97)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 36.9 36 0.0012 29.9 4.4 28 76-105 113-140 (203)
53 1b5f_A Protein (cardosin A); h 27.9 53 0.0018 29.4 4.3 32 74-105 188-227 (239)
54 3slz_A GAG-Pro-POL polyprotein 27.2 53 0.0018 26.6 3.6 25 285-322 26-50 (132)
55 3fv3_A SAPP1P-secreted asparti 26.4 48 0.0016 31.3 3.9 39 270-322 5-43 (339)
56 1j71_A Candidapepsin, aspartic 26.3 48 0.0016 31.3 3.9 39 270-322 5-43 (334)
57 1wkr_A Polyporopepsin; hydrola 25.8 52 0.0018 31.1 4.0 39 270-322 5-43 (340)
58 2hs1_A HIV-1 protease; ultra-h 25.2 46 0.0016 25.5 2.7 27 282-321 9-35 (99)
59 2qzx_A Candidapepsin-5; aspart 24.1 55 0.0019 30.9 3.9 39 270-322 5-43 (342)
60 3c9x_A Trichoderma reesei aspa 23.7 61 0.0021 30.5 4.0 33 73-105 192-230 (329)
61 3ec0_A Protease; HIV-2, inhibi 22.9 51 0.0017 25.3 2.6 29 279-320 6-34 (99)
62 1fmb_A EIAV protease; hydrolas 22.9 49 0.0017 25.6 2.6 29 283-324 10-38 (104)
63 1bxo_A Protein (penicillopepsi 22.5 67 0.0023 30.1 4.1 39 269-324 8-46 (323)
64 1izd_A Aspartic proteinase; su 22.2 66 0.0023 30.2 4.0 39 269-324 8-46 (323)
65 2hah_A Protease, retropepsin; 21.7 61 0.0021 25.6 2.9 30 278-321 11-40 (116)
66 3pvk_A Candidapepsin-2; hydrol 21.1 69 0.0024 30.2 3.9 15 308-322 29-43 (342)
67 1lya_B Cathepsin D; lysosomal 20.2 83 0.0028 27.9 4.0 33 73-105 98-137 (241)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.4e-59 Score=472.48 Aligned_cols=306 Identities=24% Similarity=0.417 Sum_probs=254.2
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~ 149 (486)
++.+.+|+++|+||||||+|+|++||||+++||+|..|..| .|..++.|||++|+||+..+
T Consensus 52 n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~-----~C~~~~~y~~~~SsT~~~~~-------------- 112 (370)
T 3psg_A 52 NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSL-----ACSDHNQFNPDDSSTFEATS-------------- 112 (370)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSG-----GGTTSCCBCGGGCTTCEEEE--------------
T ss_pred eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCc-----ccCCCCCCCCccCcCcEECC--------------
Confidence 57789999999999999999999999999999999888643 23445799999999999965
Q ss_pred CCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC-
Q 011402 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (486)
Q Consensus 150 ~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (486)
+.|.+.|++|+ +.|.+++|+|+|++..+ +++.||++....+... .....+||||||++..
T Consensus 113 --------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v--------~~~~Fg~a~~~~~~~~--~~~~~dGIlGLg~~~~s 173 (370)
T 3psg_A 113 --------QELSITYGTGS-MTGILGYDTVQVGGISD--------TNQIFGLSETEPGSFL--YYAPFDGILGLAYPSIS 173 (370)
T ss_dssp --------EEEEEESSSCE-EEEEEEEEEEEETTEEE--------EEEEEEEECSCCCGGG--GGCSCSEEEECSCGGGC
T ss_pred --------cEEEEEeCCce-EEEEEEEEEEeeCCccc--------CCeEEEEEEeeccccc--ccCCccceeccCCcccc
Confidence 69999999998 89999999999998654 4899999998765332 3456899999999764
Q ss_pred -----cHHHHHhhcCCC-CcceeEeccCC-CCCceEEeCCcCCC----CceEeeCCCCCCceEEEEEEEEEcCEEeecCC
Q 011402 229 -----SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (486)
Q Consensus 229 -----s~~~~L~~~g~i-~~~fS~~L~~~-~~~G~l~~Ggvd~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 297 (486)
+++++|++||+| +++||+||++. ..+|.|+|||+|++ ++.|+|+. .+.+|.|.+++|+|+++.+..
T Consensus 174 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~-- 250 (370)
T 3psg_A 174 ASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC-- 250 (370)
T ss_dssp GGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC--
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEECCEEEec--
Confidence 689999999999 69999999985 45899999999976 48999998 568999999999999987642
Q ss_pred cccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEECC
Q 011402 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVYP 377 (486)
Q Consensus 298 ~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~ 377 (486)
.....+++||||+++++|.+++++|.+++++... ..+.+.++| +....+|+|+|+| +|.+++||+
T Consensus 251 -----~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~----~~g~~~v~C-----~~~~~lP~i~f~~-~g~~~~l~~ 315 (370)
T 3psg_A 251 -----SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN----SDGEMVISC-----SSIDSLPDIVFTI-DGVQYPLSP 315 (370)
T ss_dssp -----TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC----TTCCEECCG-----GGGGGCCCEEEEE-TTEEEEECH
T ss_pred -----CCCceEEEcCCCCcEECCHHHHHHHHHHhCCccc----CCCcEEEEC-----CCcccCCcEEEEE-CCEEEEECH
Confidence 2356799999999999999999999999977642 122344566 4446789999999 999999999
Q ss_pred CcceEEcCCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 378 HEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 378 ~~yi~~~~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
++|+.+ .+..|+ ++...+.... .++.||||++|||++|+|||++++|||||+++
T Consensus 316 ~~yi~~-~~~~C~~~~~~~~~~~~-~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 316 SAYILQ-DDDSCTSGFEGMDVPTS-SGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHHEEE-CSSCEEESEEEECCCTT-SCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHhccc-CCCEEEEEEEeCCCCCC-CCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 999998 445796 6766543221 13479999999999999999999999999974
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.5e-59 Score=473.24 Aligned_cols=303 Identities=22% Similarity=0.368 Sum_probs=254.2
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC----CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~----~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~ 145 (486)
++.+..|+++|+||||||+|+|+|||||+++||+|..|. .|.. ++.|||++|+||+...
T Consensus 57 n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~-------~~~y~~~~SsT~~~~~---------- 119 (383)
T 2x0b_A 57 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY-------HKLFDASDSSSYKHNG---------- 119 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT-------SCCBCGGGCTTCEEEE----------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC-------CCCCCCCCCCcEEECC----------
Confidence 457889999999999999999999999999999998885 4544 4699999999999965
Q ss_pred CCCCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCC
Q 011402 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGK 225 (486)
Q Consensus 146 ~~~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~ 225 (486)
|.|.+.|++|+ +.|++++|+|+|++.. ++ +.||++....+... ....+|||||||+
T Consensus 120 ------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~f--~~~~~dGIlGLg~ 175 (383)
T 2x0b_A 120 ------------TELTLRYSTGT-VSGFLSQDIITVGGIT--------VT-QMFGEVTEMPALPF--MLAEFDGVVGMGF 175 (383)
T ss_dssp ------------EEEEEECSSCE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECCHHHH--TTCSSSEEEECSC
T ss_pred ------------cEEEEEcCCcc-EEEEEEeeEEEEcCce--------EE-EEEEEEEecCCccc--ccCCCceEeccCC
Confidence 79999999998 8999999999998754 44 89999998755321 3456899999999
Q ss_pred CCC------cHHHHHhhcCCC-CcceeEeccCC-C----CCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEc
Q 011402 226 SNS------SMISQLASSGGV-RKMFAHCLDGI-N----GGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVG 289 (486)
Q Consensus 226 ~~~------s~~~~L~~~g~i-~~~fS~~L~~~-~----~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~ 289 (486)
+.. +++++|++||+| +++||+||++. . .+|.|+|||+|+++ +.|+|+. .+.+|.|.+++|.|+
T Consensus 176 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~v~l~~i~v~ 254 (383)
T 2x0b_A 176 IEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVG 254 (383)
T ss_dssp GGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCEEEECEEEES
T ss_pred CccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEEEEEeEEEeC
Confidence 764 589999999999 69999999985 2 37999999999874 7899998 568999999999999
Q ss_pred CEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECC
Q 011402 290 LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFEN 369 (486)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~g 369 (486)
++.+. ...+..+|+||||+++++|.+++++|.+++++.. ..+.+.++|+ ..+.+|+|+|+| +
T Consensus 255 ~~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~~~v~C~-----~~~~~P~i~f~~-~ 316 (383)
T 2x0b_A 255 SSTLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFDYVVKCN-----EGPTLPDISFHL-G 316 (383)
T ss_dssp SCCCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSCEEEEGG-----GTTTCCCEEEEE-T
T ss_pred CceEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCcEEEecc-----ccccCceEEEEE-C
Confidence 97642 1345679999999999999999999999997654 1223446784 335789999999 9
Q ss_pred CcEEEECCCcceEEcC---CeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 370 SVSLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 370 g~~~~l~~~~yi~~~~---~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
|.+++||+++|+++.. +..|+ +|...+.+.. ..+.||||++|||++|+|||++|+|||||+++
T Consensus 317 g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~-~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 317 GKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPP-TGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp TEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTT-TCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEECHHHhEeeccCCCCCeEEEEEEecccCCC-CCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 9999999999998863 46897 7876553221 24689999999999999999999999999864
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2e-58 Score=461.97 Aligned_cols=317 Identities=24% Similarity=0.366 Sum_probs=256.8
Q ss_pred CcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCcCCCCccCCccCCCCCCccceecCCC
Q 011402 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQ 138 (486)
Q Consensus 61 ~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~ 138 (486)
..|+. ++.+..|+++|+||||||++.|+|||||+++||+|..|. .|.. ++.|||++|+|++...
T Consensus 14 ~~~l~----n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~--- 79 (351)
T 1tzs_A 14 KEPLI----NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT-------HSRFQPSQSSTYSQPG--- 79 (351)
T ss_dssp CCTTG----GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-------SCCBCGGGCTTCBCCS---
T ss_pred ceece----ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC-------CCcCCcccCcceEECC---
Confidence 45664 456789999999999999999999999999999999886 5654 4699999999999854
Q ss_pred cccCCCCCCCCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcc
Q 011402 139 EFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALD 218 (486)
Q Consensus 139 ~~C~~~~~~~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~ 218 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||+....+... .....+
T Consensus 80 -------------------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~--------~~~~fg~~~~~~~~~~--~~~~~~ 129 (351)
T 1tzs_A 80 -------------------QSFSIQYGTGS-LSGIIGADQVSVEGLTV--------VGQQFGESVTEPGQTF--VDAEFD 129 (351)
T ss_dssp -------------------CEEEEESSSCE-EEEEEEEEEEEETTEEE--------EEEEEEEECSCCCGGG--GGCSCS
T ss_pred -------------------CEEEEEeCCCC-eEEEEEEeEEEECCeEE--------CCeEEEEEEecccccc--ccCCCc
Confidence 79999999998 89999999999998653 4899999988755321 345689
Q ss_pred eeeecCCCCC------cHHHHHhhcCCC-CcceeEeccCCC-C--CceEEeCCcCCC----CceEeeCCCCCCceEEEEE
Q 011402 219 GIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN-G--GGIFAIGHVVQP----EVNKTPLVPNQPHYSINMT 284 (486)
Q Consensus 219 GIlGLg~~~~------s~~~~L~~~g~i-~~~fS~~L~~~~-~--~G~l~~Ggvd~~----~~~~~p~~~~~~~~~v~l~ 284 (486)
||||||++.. +++++|++||+| +++||+||++.. . .|.|+||++|++ ++.|+|+. .+.+|.|.++
T Consensus 130 GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~ 208 (351)
T 1tzs_A 130 GILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALD 208 (351)
T ss_dssp EEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEE
T ss_pred eEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeC
Confidence 9999999764 589999999999 699999999852 2 799999999975 48999998 4689999999
Q ss_pred EEEEcCEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEE
Q 011402 285 AVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVT 364 (486)
Q Consensus 285 ~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~ 364 (486)
+|.|+++.+.. .....++|||||+++++|.+++++|.+++++.... +.+.++|+. .+.+|+|+
T Consensus 209 ~i~v~~~~~~~-------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-----g~~~~~C~~-----~~~~P~i~ 271 (351)
T 1tzs_A 209 NIQVGGTVMFC-------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVD-----GEYAVECAN-----LNVMPDVT 271 (351)
T ss_dssp EEEETTEEEEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECS-----SSEEECGGG-----GGGSCCEE
T ss_pred EEEECCceEEc-------CCCceEEeccCCcceeCCHHHHHHHHHHhCCcccC-----CeEEEeCCC-----CccCCcEE
Confidence 99999987531 23567999999999999999999999999766421 334467842 35689999
Q ss_pred EEECCCcEEEECCCcceEEcC---CeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCCCCCCCCe
Q 011402 365 FHFENSVSLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYNCECSSSI 440 (486)
Q Consensus 365 f~f~gg~~~~l~~~~yi~~~~---~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~~~~~~~~ 440 (486)
|+| +|.+++||+++|+++.. +..|+ +|...+... ...+.||||++|||++|+|||++++|||||+++|+ +..
T Consensus 272 f~f-~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~-~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~--s~~ 347 (351)
T 1tzs_A 272 FTI-NGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHP-PAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW--SHP 347 (351)
T ss_dssp EEE-TTEEEEECTTTSEECC-----CCEEESEEECCCCT-TTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC-------
T ss_pred EEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCC-CCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc--cch
Confidence 999 99999999999999863 45897 677654321 12467999999999999999999999999999994 344
Q ss_pred eee
Q 011402 441 KVR 443 (486)
Q Consensus 441 ~i~ 443 (486)
+||
T Consensus 348 ~~~ 350 (351)
T 1tzs_A 348 QFE 350 (351)
T ss_dssp ---
T ss_pred hhc
Confidence 443
No 4
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=4e-58 Score=467.69 Aligned_cols=347 Identities=21% Similarity=0.374 Sum_probs=275.6
Q ss_pred ccCcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCC
Q 011402 59 GVDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQ 138 (486)
Q Consensus 59 ~~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~ 138 (486)
++.+|+.+ +..+++|+++|+||||||+|.|++||||+++||+|..| .+|+||+.+.|.+
T Consensus 8 ~~~~pv~~---d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s 66 (413)
T 3vla_A 8 ALVVPVKK---DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRT 66 (413)
T ss_dssp EEEEEEEE---CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTS
T ss_pred cEEEEeee---cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCc
Confidence 34566654 34678999999999999999999999999999998764 2689999999999
Q ss_pred cccCCCCCCCC--------CCCCCCCCCeeeEEe-CCCCeEeEEEEEEEEEEecccCCcc-ccccCcceEEeeeeeccCC
Q 011402 139 EFCHGVYGGPL--------TDCTANTSCPYLEIY-GDGSSTTGYFVQDVVQYDKVSGDLQ-TTSTNGSLIFGCGARQSGN 208 (486)
Q Consensus 139 ~~C~~~~~~~~--------~~c~~~~~~~~~i~Y-~dg~~~~G~~~~D~v~ig~~~~~~~-~~~~~~~~~fg~~~~~~~~ 208 (486)
+.|...+.... +.|. ++.|.|.+.| +||+.+.|++++|+|+|+...+... ....++++.|||+..+...
T Consensus 67 ~~C~~~~~~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~ 145 (413)
T 3vla_A 67 SQCSLSGSIACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQ 145 (413)
T ss_dssp HHHHHTTCCEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGT
T ss_pred ccccccccCCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccccccc
Confidence 99987653221 2344 4679999999 5888899999999999986433210 0123568999999986321
Q ss_pred CCCCCCCCcceeeecCCCCCcHHHHHhhcCCCCcceeEeccCC-CCCceEEeCCcCC---------CC-ceEeeCCCCC-
Q 011402 209 LDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ---------PE-VNKTPLVPNQ- 276 (486)
Q Consensus 209 ~~~~~~~~~~GIlGLg~~~~s~~~~L~~~g~i~~~fS~~L~~~-~~~G~l~~Ggvd~---------~~-~~~~p~~~~~- 276 (486)
. .....+||||||++..+++.||.+++.++++||+||.+. ..+|.|+||++|. .. +.|+|++.++
T Consensus 146 g---~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~ 222 (413)
T 3vla_A 146 N---LASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPV 222 (413)
T ss_dssp T---SCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSS
T ss_pred C---cccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCc
Confidence 1 224689999999999999999999998899999999974 5679999999874 24 9999998653
Q ss_pred ------------CceEEEEEEEEEcCEEeecCCcccccC--CCCceEEeccCceeecChhHHHHHHHHHHhhCC--CCcc
Q 011402 277 ------------PHYSINMTAVQVGLDFLNLPTDVFGVG--DNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP--DLKV 340 (486)
Q Consensus 277 ------------~~~~v~l~~i~v~~~~~~~~~~~~~~~--~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~--~~~~ 340 (486)
.+|+|+|++|.||++.+.++...|... +..++||||||++++||+++|++|.+++.+... ..+.
T Consensus 223 ~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~ 302 (413)
T 3vla_A 223 STSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITR 302 (413)
T ss_dssp CCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCc
Confidence 689999999999999998887766533 357899999999999999999999999987642 1111
Q ss_pred -cccCCCCceeecCCCc----cCCCceEEEEECC-CcEEEECCCcceEEc-CCeEEEEEeccCccccCCCCeeeechhhh
Q 011402 341 -HTVHDEYTCFQYSESV----DEGFPNVTFHFEN-SVSLKVYPHEYLFPF-EDLWCIGWQNSGMQSRDRKNMTLLGDLVL 413 (486)
Q Consensus 341 -~~~~~~~~C~~~~~~~----~~~~p~i~f~f~g-g~~~~l~~~~yi~~~-~~~~C~~i~~~~~~~~~~~~~~iLG~~fl 413 (486)
........||..++.. ...+|+|+|+|.| +++++||+++|+++. ++..|+++..... ...+.||||+.||
T Consensus 303 ~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~---~~~~~~IlGd~fl 379 (413)
T 3vla_A 303 VASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGS---NLRTSIVIGGHQL 379 (413)
T ss_dssp ECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEES---SCSSSEEECHHHH
T ss_pred CCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCC---CcccceeEehhhh
Confidence 1122346899876432 1468999999943 389999999999986 5678998877542 1236799999999
Q ss_pred ceeEEEEECCCCEEEEEeCC
Q 011402 414 SNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 414 ~~~y~vfD~~~~rIg~a~~~ 433 (486)
|++|+|||++++|||||++.
T Consensus 380 ~~~~vvfD~~~~riGfa~~~ 399 (413)
T 3vla_A 380 EDNLVQFDLATSRVGFSGTL 399 (413)
T ss_dssp TTEEEEEETTTTEEEEEEEG
T ss_pred cCeEEEEECCCCEEEEEEec
Confidence 99999999999999999953
No 5
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=5.3e-58 Score=457.67 Aligned_cols=306 Identities=23% Similarity=0.334 Sum_probs=253.2
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCC--CCCCCCC--cCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~--~c~~C~~--~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
.+..|+++|+||||+|++.|+|||||+++||++. .|..|.. ....|..++.|||++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN------------ 77 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC------------
Confidence 4679999999999999999999999999999976 6765532 23356677899999999999966
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (486)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 2qzx_A 78 ----------TRFDIKYGDGSYAKGKLYKDTVGIGGVS--------VRDQLFANVWSTS---------ARKGILGIGFQS 130 (342)
T ss_dssp ----------EEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEEC---------SSSCEEECSCGG
T ss_pred ----------CcEEEEeCCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEecC---------CCcCEEEEcccc
Confidence 6999999999988999999999999754 3489999999763 268999999975
Q ss_pred C--------cHHHHHhhcCCC-CcceeEeccCC-CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEe
Q 011402 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFL 293 (486)
Q Consensus 228 ~--------s~~~~L~~~g~i-~~~fS~~L~~~-~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~ 293 (486)
. +++.+|++||+| +++||+||++. ...|.|+||++|+++ +.|+|+. ...+|.|.+++|.|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPIT-SEKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEecc-CCceEEEEEeEEEECCEec
Confidence 3 899999999999 69999999875 567999999999875 7899998 4569999999999999887
Q ss_pred ecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEE
Q 011402 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSL 373 (486)
Q Consensus 294 ~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~ 373 (486)
.. ...++|||||++++||++++++|++++++...........+.++| ..+|+|+|+|.+|.++
T Consensus 210 ~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~~C--------~~~p~i~f~f~~g~~~ 272 (342)
T 2qzx_A 210 DA---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVADC--------KTSGTIDFQFGNNLKI 272 (342)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEECT--------TCCCEEEEEETTTEEE
T ss_pred CC---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEEEC--------CCCCcEEEEECCCcEE
Confidence 53 245999999999999999999999999876421110111233566 2379999999668999
Q ss_pred EECCCcceEEc------CCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCCCCCCCCeeeee
Q 011402 374 KVYPHEYLFPF------EDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYNCECSSSIKVRD 444 (486)
Q Consensus 374 ~l~~~~yi~~~------~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~~~~~~~~~i~~ 444 (486)
+||+++|+++. ++..|+ ++... +.||||++|||++|+|||++++|||||+++| ++..+|++
T Consensus 273 ~i~~~~~~~~~~~~~~~~~~~C~~~i~~~--------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~--~~~~~i~~ 340 (342)
T 2qzx_A 273 SVPVSEFLFQTYYTSGKPFPKCEVRIRES--------EDNILGDNFLRSAYVVYNLDDKKISMAPVKY--TSESDIVA 340 (342)
T ss_dssp EEEGGGGEECCBCTTSCBCSSEEESEEEC--------SSCEECHHHHTTEEEEEETTTTEEEEEEBCC--CSCCCEEE
T ss_pred EEcHHHhcccccccCCCCCCccEEEEecC--------CCcEeChHhhhcEEEEEECCCCEEEEEeeCC--CCCCCeEE
Confidence 99999999973 235797 45442 3599999999999999999999999999999 45566654
No 6
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=8.4e-58 Score=454.58 Aligned_cols=302 Identities=21% Similarity=0.336 Sum_probs=253.0
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCC--CCCCCCC--cCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~--~c~~C~~--~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
.+..|+++|+||||||++.|+|||||+++||++. .|..|.. ....|..++.|||++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN------------ 77 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC------------
Confidence 3679999999999999999999999999999976 6765421 12346667899999999999865
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (486)
|.|.+.|++|+.+.|.+++|+|+|++..+ +++.||+++... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~~--------~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (334)
T 1j71_A 78 ----------QDFSIEYGDLTSSQGSFYKDTVGFGGISI--------KNQQFADVTTTS---------VDQGIMGIGFTA 130 (334)
T ss_dssp ----------EEEEEEBTTSCEEEEEEEEEEEEETTEEE--------EEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CceEEEECCCCEEEEEEEEEEEEECCEEE--------ccEEEEEEEecC---------CCccEEEEcCCc
Confidence 69999999999889999999999997643 489999998763 268999999975
Q ss_pred C--------cHHHHHhhcCCC-CcceeEeccCC-CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEe
Q 011402 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFL 293 (486)
Q Consensus 228 ~--------s~~~~L~~~g~i-~~~fS~~L~~~-~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~ 293 (486)
. +++.+|++||+| +++||+||++. ...|.|+||++|+++ +.|+|+. ...+|.|.+++|.|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSV 209 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEec
Confidence 4 899999999999 69999999875 567999999999886 7899998 4569999999999999887
Q ss_pred ecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCC-CceeecCCCccCCCceEEEEECCCcE
Q 011402 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDE-YTCFQYSESVDEGFPNVTFHFENSVS 372 (486)
Q Consensus 294 ~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~p~i~f~f~gg~~ 372 (486)
.. ...++|||||++++||++++++|++++++.+.. ....+. ++|+ .+|+|+|+|.+|.+
T Consensus 210 ~~---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~C~--------~~p~i~f~f~~g~~ 269 (334)
T 1j71_A 210 ST---------NADVVLDSGTTITYFSQSTADKFARIVGATWDS---RNEIYRLPSCD--------LSGDAVFNFDQGVK 269 (334)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEET---TTTEEECSSSC--------CCSEEEEEESTTCE
T ss_pred cC---------CccEEEeCCCCcEecCHHHHHHHHHHcCCcccC---CCceEEEEcCC--------CCCceEEEEcCCcE
Confidence 53 245999999999999999999999999876521 111233 6783 37999999976899
Q ss_pred EEECCCcceEEc-CCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCCCCCCCCeeee
Q 011402 373 LKVYPHEYLFPF-EDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYNCECSSSIKVR 443 (486)
Q Consensus 373 ~~l~~~~yi~~~-~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~~~~~~~~~i~ 443 (486)
++||+++|+++. ++..|+ ++... +.||||++|||++|+|||++++|||||+++|+ +..+|+
T Consensus 270 ~~i~~~~y~~~~~~~~~C~~~i~~~--------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~--~~~~i~ 332 (334)
T 1j71_A 270 ITVPLSELILKDSDSSICYFGISRN--------DANILGDNFLRRAYIVYDLDDKTISLAQVKYT--SSSDIS 332 (334)
T ss_dssp EEEEGGGGEEECSSSSCEEESEEEC--------TTCEECHHHHTTEEEEEETTTTEEEEEEECCC--SCCCEE
T ss_pred EEECHHHheeecCCCCeeEEEEeEC--------CCcEEChHhhccEEEEEECCCCEEEEEecCCC--CccceE
Confidence 999999999987 333597 55542 35999999999999999999999999999994 455554
No 7
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=6.8e-58 Score=453.35 Aligned_cols=298 Identities=24% Similarity=0.403 Sum_probs=250.7
Q ss_pred CCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCC
Q 011402 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (486)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~ 150 (486)
..+..|+++|+||||||++.|+|||||+++||+|..|..| |..++.|||++|+|++...
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c------~~~~~~y~~~~SsT~~~~~--------------- 70 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC------GSGQTKYDPNQSSTYQADG--------------- 70 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC------CTTSCCBCGGGCTTCEEEE---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH------hcCCCCCCcccCCCeeeCC---------------
Confidence 4678999999999999999999999999999999999888 2345799999999999854
Q ss_pred CCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC--
Q 011402 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (486)
Q Consensus 151 ~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (486)
|.|.+.|++|+.+.|.+++|+|+|++..+ +++.|||++..++.| .....+||||||++..
T Consensus 71 -------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v--------~~~~fg~~~~~~~~f---~~~~~~GilGLg~~~~s~ 132 (325)
T 2apr_A 71 -------RTWSISYGDGSSASGILAKDNVNLGGLLI--------KGQTIELAKREAASF---ASGPNDGLLGLGFDTITT 132 (325)
T ss_dssp -------EEEEEECTTSCEEEEEEEEEEEEETTEEE--------EEEEEEEEEEECHHH---HTSSCSEEEECSCGGGCS
T ss_pred -------CEEEEEECCCCCEEEEEEEEEEEECCEEE--------CcEEEEEEeccCccc---ccCCCceEEEeCCccccc
Confidence 79999999999889999999999998653 389999999876544 2334899999999753
Q ss_pred -----cHHHHHhhcCCC-CcceeEeccCC--CCCceEEeCCcCCC----CceEeeCCCCCCceEEEEEEEEEcCEEeecC
Q 011402 229 -----SMISQLASSGGV-RKMFAHCLDGI--NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (486)
Q Consensus 229 -----s~~~~L~~~g~i-~~~fS~~L~~~--~~~G~l~~Ggvd~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~ 296 (486)
+++++|++||+| +++||+||++. ...|.|+||++|++ ++.|+|+.+++.+|.|.+++|+|+++ +.
T Consensus 133 ~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~-- 209 (325)
T 2apr_A 133 VRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV-- 209 (325)
T ss_dssp STTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE--
T ss_pred ccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec--
Confidence 589999999999 69999999653 56799999999976 48899998667899999999999993 31
Q ss_pred CcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEEC
Q 011402 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (486)
Q Consensus 297 ~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~ 376 (486)
.....++|||||++++||+++|+++++++.+.+... +.+.++|+. ..+|+|+|+| +|.+++||
T Consensus 210 ------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~~~~~C~~------~~~p~i~f~f-~g~~~~ip 272 (325)
T 2apr_A 210 ------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD----GTYTISCDT------SAFKPLVFSI-NGASFQVS 272 (325)
T ss_dssp ------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS----SCEEECSCG------GGCCCEEEEE-TTEEEEEC
T ss_pred ------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC----CeEEEECCC------CCCCcEEEEE-CCEEEEEC
Confidence 224579999999999999999999999998765432 234457741 3489999999 77799999
Q ss_pred CCcceEEcCCeEEEE-EeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 377 PHEYLFPFEDLWCIG-WQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 377 ~~~yi~~~~~~~C~~-i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
+++|+++..+..|++ |.... .+.||||++|||++|+|||++++|||||+++
T Consensus 273 ~~~~~~~~~~~~C~~~i~~~~------~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 273 PDSLVFEEFQGQCIAGFGYGN------WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp GGGGEEEEETTEEEESEEEES------SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHEEEcCCCCeEEEEEEcCC------CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 999998754568974 55443 4679999999999999999999999999974
No 8
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.8e-57 Score=453.45 Aligned_cols=303 Identities=22% Similarity=0.335 Sum_probs=251.3
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCC--CCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--CKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~--c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~ 149 (486)
.++.|+++|+||||||++.|++||||+++||++.. |..|. .|..++.|||++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~----~C~~~~~y~~~~SsT~~~~~-------------- 71 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV----DCKSSGTFTPSSSSSYKNLG-------------- 71 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC----CTTTTCCBCGGGCTTCEEEE--------------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC----CCCCCCcCCCccCcceeeCC--------------
Confidence 46799999999999999999999999999999543 43221 13335799999999999976
Q ss_pred CCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC-
Q 011402 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (486)
Q Consensus 150 ~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (486)
|.|.+.|++|+.+.|.+++|+|+|++..+ +++.||+++..++ .+||||||++..
T Consensus 72 --------~~~~i~Yg~gs~~~G~~~~D~v~~g~~~v--------~~~~fg~~~~~~~---------~~GilGLg~~~~~ 126 (339)
T 3fv3_A 72 --------AAFTIRYGDGSTSQGTWGKDTVTINGVSI--------TGQQIADVTQTSV---------DQGILGIGYTSNE 126 (339)
T ss_dssp --------EEEEEECTTSCEEEEEEEEEEEEETTEEE--------EEEEEEEEEEESS---------SSCEEECSCGGGC
T ss_pred --------ceEEEEECCCceEEEEEEEEEEEECCEEE--------CceEEEEEEecCC---------CceeEEecCcccc
Confidence 69999999998899999999999998654 4899999998653 589999999753
Q ss_pred ---------------cHHHHHhhcCCC-CcceeEeccCC-CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEE
Q 011402 229 ---------------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQ 287 (486)
Q Consensus 229 ---------------s~~~~L~~~g~i-~~~fS~~L~~~-~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~ 287 (486)
+|+++|++||+| +++||+||++. ...|.|+|||+|+++ +.|+|+. ...+|.|.+++|.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 205 (339)
T 3fv3_A 127 AVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVT-SSQALTISLASVN 205 (339)
T ss_dssp CCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBC-CSSSCEEEEEEEE
T ss_pred ccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecc-cCccEEEEEEEEE
Confidence 389999999999 69999999875 457999999999875 7899998 4569999999999
Q ss_pred EcCEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEE
Q 011402 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHF 367 (486)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f 367 (486)
|+++.+.. ...++|||||++++||++++++|++++++.+.........+.++|+. ..+|+|+|+|
T Consensus 206 v~g~~~~~---------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~------~~~p~i~f~f 270 (339)
T 3fv3_A 206 LKGSSFSF---------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCNT------DTSGTTVFNF 270 (339)
T ss_dssp ESSCEEEE---------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEECTTC------CCCSEEEEEE
T ss_pred ECCEeecC---------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEEecCC------CCCCcEEEEE
Confidence 99988753 24699999999999999999999999987653110122334467742 3589999999
Q ss_pred CCCcEEEECCCcceEEcCCeEE-EEEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCCCCCCCCeeee
Q 011402 368 ENSVSLKVYPHEYLFPFEDLWC-IGWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYNCECSSSIKVR 443 (486)
Q Consensus 368 ~gg~~~~l~~~~yi~~~~~~~C-~~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~~~~~~~~~i~ 443 (486)
.+|.+++||+++|+++.++..| ++|.. . +.||||++|||++|+|||++++|||||+++|+ +..+|+
T Consensus 271 ~~g~~~~v~~~~~~~~~~~~~C~~~i~~-~-------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~--~~s~i~ 337 (339)
T 3fv3_A 271 GNGAKITVPNTEYVYQNGDGTCLWGIQP-S-------DDTILGDNFLRHAYLLYNLDANTISIAQVKYT--TDSSIS 337 (339)
T ss_dssp TTSCEEEEEGGGGEEECSSSCEEESEEE-C-------SSCEECHHHHTTEEEEEETTTTEEEEEEBCCC--SCCCEE
T ss_pred CCCCEEEECHHHheeeCCCCeEEEEEEe-C-------CcEEeChHHHhCEEEEEECCCCEEEEEecCCC--CccceE
Confidence 5589999999999998655577 57766 2 46999999999999999999999999999994 455554
No 9
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.7e-57 Score=454.28 Aligned_cols=307 Identities=23% Similarity=0.363 Sum_probs=253.4
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCC--CCCCCCc--CCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--CKECPRR--SSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~--c~~C~~~--~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
.++.|+++|+||||||++.|++||||+++||++.. |..|... ...|..++.|||++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN------------ 77 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC------------
Confidence 46799999999999999999999999999999875 7666432 2356677899999999999976
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (486)
|.|.+.|++|+.+.|.+++|+|+|++..+ +++.||+++... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~gs~~~G~~~~D~v~ig~~~v--------~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 3pvk_A 78 ----------TPFKIGYGDGSSSQGTLYKDTVGFGGVSI--------KNQVLADVDSTS---------IDQGILGVGYKT 130 (342)
T ss_dssp ----------EEEEEECSSSCEEEEEEEEEEEEETTEEE--------EEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CeEEEEecCCCeEEEEEEEEEEEECCEEe--------cceEEEEEEccC---------CCccEEEecCcc
Confidence 69999999999899999999999998654 489999998764 268999999986
Q ss_pred -------CcHHHHHhhcCCC-CcceeEeccCC-CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEee
Q 011402 228 -------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (486)
Q Consensus 228 -------~s~~~~L~~~g~i-~~~fS~~L~~~-~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~ 294 (486)
.+++.+|++||+| +++||+||++. ...|.|+|||+|+++ +.|+|+. ...+|.|.+++|.|+++.+.
T Consensus 131 ~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVT-SDRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEE
T ss_pred ccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecC-ccceEEEEEeEEEECCEEec
Confidence 4799999999999 69999999875 457999999999875 7899998 45699999999999999875
Q ss_pred cCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEE
Q 011402 295 LPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLK 374 (486)
Q Consensus 295 ~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~ 374 (486)
.+ +..++|||||++++||++++++|.+++++.+.........+.++|+ ..|+|+|+|.+|.+++
T Consensus 210 ~~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~--------~~p~i~f~f~~g~~~~ 273 (342)
T 3pvk_A 210 TD--------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEVDCN--------LSGDVVFNFSKNAKIS 273 (342)
T ss_dssp EE--------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEECSC--------CCSEEEEEESTTCEEE
T ss_pred CC--------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEEecC--------CCCceEEEECCCCEEE
Confidence 32 2469999999999999999999999998765321111112445672 3599999995489999
Q ss_pred ECCCcceEEc---CC---eEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCCCCCCCCeeeee
Q 011402 375 VYPHEYLFPF---ED---LWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYNCECSSSIKVRD 444 (486)
Q Consensus 375 l~~~~yi~~~---~~---~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~~~~~~~~~i~~ 444 (486)
||+++|+++. .+ ..|+ ++... +.||||++|||++|+|||++++|||||+++|+ +..+|++
T Consensus 274 vp~~~~~~~~~~~~g~~~~~C~~~i~~~--------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~--~~s~iv~ 340 (342)
T 3pvk_A 274 VPASEFAASLQGDDGQPYDKCQLLFDVN--------DANILGDNFLRSAYIVYDLDDNEISLAQVKYT--SASSISA 340 (342)
T ss_dssp EEGGGGEEC----------CEEESEEEC--------TTCEECHHHHTTEEEEEETTTTEEEEEEBCCC--SCCCEEE
T ss_pred EcHHHheeeccccCCCcCCeeEEEEeeC--------CCeEeCHHHHhcEEEEEECCCCEEEEEecCCC--CCCCEEE
Confidence 9999999973 22 6796 55542 46899999999999999999999999999994 4555543
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-57 Score=451.64 Aligned_cols=302 Identities=24% Similarity=0.406 Sum_probs=253.7
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
++.+..|+++|+||||||++.|++||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------ 68 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN-------HNKFKPRQSSTYVETG------------ 68 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT-------SCCBCGGGCTTCEEEE------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC-------CCcCCCccCCCeEeCC------------
Confidence 456789999999999999999999999999999998886 4544 4689999999999865
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+... .....+||||||++.
T Consensus 69 ----------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~~--------~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 127 (324)
T 1am5_A 69 ----------KTVDLTYGTGG-MRGILGQDTVSVGGGSD--------PNQELGESQTEPGPFQ--AAAPFDGILGLAYPS 127 (324)
T ss_dssp ----------EEEEEECSSCE-EEEEEEEEEEESSSSCE--------EEEEEEEEEECCSTTT--TTCSSSEEEECSCGG
T ss_pred ----------cEEEEEECCCC-eEEEEEECceeECCcEE--------cccEEEEEEecccccc--cCCCCceEEecCCcc
Confidence 69999999998 59999999999997643 4899999998765422 345689999999975
Q ss_pred C------cHHHHHhhcCCC-CcceeEeccCC-CCCceEEeCCcCCC----CceEeeCCCCCCceEEEEEEEEEcCEEeec
Q 011402 228 S------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (486)
Q Consensus 228 ~------s~~~~L~~~g~i-~~~fS~~L~~~-~~~G~l~~Ggvd~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~ 295 (486)
. +++++|++||+| +++||+||++. ...|.|+||++|++ ++.|+|+. .+.+|.|.+++|.|+++.+..
T Consensus 128 ~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (324)
T 1am5_A 128 IAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAAC 206 (324)
T ss_dssp GCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECCC
T ss_pred ccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceeec
Confidence 4 689999999999 69999999985 35899999999975 48999997 467999999999999987531
Q ss_pred CCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEE
Q 011402 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKV 375 (486)
Q Consensus 296 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l 375 (486)
.+ ..++|||||+++++|++++++|.+++++. . ..+.+.++|+ ..+.+|+|+|+| +|.+++|
T Consensus 207 -------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~----~~g~~~~~C~-----~~~~~P~i~f~f-~g~~~~i 267 (324)
T 1am5_A 207 -------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E----NQGEMMGNCA-----SVQSLPDITFTI-NGVKQPL 267 (324)
T ss_dssp -------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E----CCCCEECCTT-----SSSSSCCEEEEE-TTEEEEE
T ss_pred -------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-c----cCCcEEEeCC-----CcccCCcEEEEE-CCEEEEE
Confidence 12 67999999999999999999999999765 2 1223446774 345789999999 9999999
Q ss_pred CCCcceEEcCCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 376 YPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 376 ~~~~yi~~~~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
|+++|+++. +..|+ +|...+.+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 268 ~~~~y~~~~-~~~C~~~~~~~~~~~~-~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 268 PPSAYIEGD-QAFCTSGLGSSGVPSN-TSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CHHHHEEES-SSCEEECEEECCSCCS-SSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CHHHhcccC-CCeEEEEEEECccCCC-CCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 999999987 66897 7876543211 24689999999999999999999999999974
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=7.7e-58 Score=452.75 Aligned_cols=300 Identities=22% Similarity=0.358 Sum_probs=250.9
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCC--CCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQC--KECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c--~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
++.+..|+++|+||||||++.|++||||+++||+|..| ..|.. ++.|||++|+|++..+
T Consensus 10 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------ 70 (323)
T 3cms_A 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN-------HQRFDPRKSSTFQNLG------------ 70 (323)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEEE------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC-------CCCCCCccCCCeEECC------------
Confidence 45678999999999999999999999999999999988 34654 4689999999999965
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+... .....+||||||++.
T Consensus 71 ----------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~--------~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 129 (323)
T 3cms_A 71 ----------KPLSIHYGTGS-MQGILGYDTVTVSNIVD--------IQQTVGLSTQEPGDFF--TYAEFDGILGMAYPS 129 (323)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETTEEE--------EEEEEEEEEECCSHHH--HHSSCSEEEECSCGG
T ss_pred ----------cEEEEEeCCCC-eEEEEEEEEEEECCeEE--------eccEEEEEEecccccc--cccCCceEEecCcch
Confidence 69999999998 89999999999997653 4899999998754211 234579999999975
Q ss_pred C------cHHHHHhhcCCC-CcceeEeccCCCCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEeecC
Q 011402 228 S------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (486)
Q Consensus 228 ~------s~~~~L~~~g~i-~~~fS~~L~~~~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~ 296 (486)
. +++++|++||+| +++||+||++....|.|+||++|+++ +.|+|+. .+.+|.|.+++|.|+++.+..+
T Consensus 130 ~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~ 208 (323)
T 3cms_A 130 LASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVACE 208 (323)
T ss_dssp GSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEEST
T ss_pred hhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeecC
Confidence 3 689999999999 69999999986445999999999875 7899998 5689999999999999887532
Q ss_pred CcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEEC
Q 011402 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (486)
Q Consensus 297 ~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~ 376 (486)
....++|||||+++++|++++++|.+++++... ..+.+.++|+ ..+.+|+|+|+| +|.+++||
T Consensus 209 -------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~g~~~~~C~-----~~~~~P~i~f~f-~g~~~~i~ 271 (323)
T 3cms_A 209 -------GGCQAILDTGTSKLVGPSSDILNIQQAIGATQN----QYGEFDIDCD-----NLSYMPTVVFEI-NGKMYPLT 271 (323)
T ss_dssp -------TCEEEEECTTCCSEEECHHHHHHHHHHHTCEEE----TTTEEEECTT-----CTTTSCCEEEEE-TTEEEEEC
T ss_pred -------CCcEEEEecCCccEeCCHHHHHHHHHHhCCeec----CCCcEEEECC-----CCccCceEEEEE-CCEEEEEC
Confidence 246799999999999999999999999976532 1122335663 345789999999 99999999
Q ss_pred CCcceEEcCCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 377 PHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 377 ~~~yi~~~~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
+++|+++ ++..|+ +|+..+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 272 ~~~y~~~-~~~~C~~~i~~~~-----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 272 PSAYTSQ-DQGFCTSGFQSEN-----HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HHHHEEE-ETTEEEESEEEC--------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhccC-CCCEEEEEEEeCC-----CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 9999998 456897 577653 14679999999999999999999999999964
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=5.4e-57 Score=447.94 Aligned_cols=302 Identities=25% Similarity=0.444 Sum_probs=251.3
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCC--CCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~--C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
++.+..|+++|+||||||++.|+|||||+++||+|..|.. |.. ++.|||++|+|++...
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------ 69 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFL-------HSKYDHEASSSYKANG------------ 69 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEEE------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCC-------cCcCCcccCcCeEECC------------
Confidence 4567899999999999999999999999999999999875 544 4689999999999854
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccC-CCCCCCCCCcceeeecCCC
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDGIIGFGKS 226 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GIlGLg~~ 226 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+ .+ .....+||||||++
T Consensus 70 ----------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~--------~~~~fg~~~~~~~~~f---~~~~~~GilGLg~~ 127 (329)
T 1dpj_A 70 ----------TEFAIQYGTGS-LEGYISQDTLSIGDLTI--------PKQDFAEATSEPGLTF---AFGKFDGILGLGYD 127 (329)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETTEEE--------EEEEEEEEEECCHHHH---TTCSCSEEEECSCG
T ss_pred ----------cEEEEEECCce-EEEEEEEEEEEECCeEE--------CCeEEEEEEecCcccc---ccCCcceEEEeCCc
Confidence 79999999995 89999999999997653 4899999998755 23 23468999999997
Q ss_pred CC------cHHHHHhhcCCC-CcceeEeccCCC----CCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCE
Q 011402 227 NS------SMISQLASSGGV-RKMFAHCLDGIN----GGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLD 291 (486)
Q Consensus 227 ~~------s~~~~L~~~g~i-~~~fS~~L~~~~----~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~ 291 (486)
.. +++.+|++||+| +++||+||.+.. .+|.|+||++|+++ +.|+|+. .+.+|.|.+++|.|+++
T Consensus 128 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 128 TISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDE 206 (329)
T ss_dssp GGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTE
T ss_pred hhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCe
Confidence 64 468899999999 699999998742 37999999999865 7899998 56899999999999998
Q ss_pred EeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCc
Q 011402 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSV 371 (486)
Q Consensus 292 ~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~ 371 (486)
.+.. .+..++|||||++++||++++++|.+++++... ..+.+.++| .....+|+|+|+| +|.
T Consensus 207 ~~~~--------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~g~~~~~C-----~~~~~~P~i~f~f-~g~ 268 (329)
T 1dpj_A 207 YAEL--------ESHGAAIDTGTSLITLPSGLAEMINAEIGAKKG----WTGQYTLDC-----NTRDNLPDLIFNF-NGY 268 (329)
T ss_dssp EEEC--------SSCEEEECTTCSCEEECHHHHHHHHHHHTCEEC----TTSSEEECG-----GGGGGCCCEEEEE-TTE
T ss_pred EecC--------CCccEEeeCCCCcEECCHHHHHHHHHHhCCccC----CCCeEEEEC-----CCCCcCCcEEEEE-CCE
Confidence 8742 246799999999999999999999999976521 122233455 4456789999999 899
Q ss_pred EEEECCCcceEEcCCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 372 SLKVYPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 372 ~~~l~~~~yi~~~~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
+++||+++|+++.+ ..|+ +|...+.+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 269 ~~~i~~~~y~~~~~-~~C~~~~~~~~~~~-~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 269 NFTIGPYDYTLEVS-GSCISAITPMDFPE-PVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEEECTTTSEEEET-TEEEECEEECCCCT-TTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHhEecCC-CEEEEEEEecccCC-CCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99999999999875 5797 677654221 124689999999999999999999999999974
No 13
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.8e-57 Score=454.76 Aligned_cols=305 Identities=22% Similarity=0.347 Sum_probs=256.1
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~---~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~ 146 (486)
++.+..|+++|+||||||++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 14 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~~----------- 75 (361)
T 1mpp_A 14 DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVG-------KRFFDPSSSSTFKETD----------- 75 (361)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCS-------SCCBCGGGCTTCEEEE-----------
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCC-------CCcCCCccCCceEecC-----------
Confidence 456789999999999999999999999999999999987 6765 3689999999999965
Q ss_pred CCCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccC-----CCCCCCCCCcceee
Q 011402 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-----NLDSTNEEALDGII 221 (486)
Q Consensus 147 ~~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~-----~~~~~~~~~~~GIl 221 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+ .+. .....+|||
T Consensus 76 -----------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~v--------~~~~fg~~~~~~~~~~~~~~~--~~~~~~Gil 133 (361)
T 1mpp_A 76 -----------YNLNITYGTGG-ANGIYFRDSITVGGATV--------KQQTLAYVDNVSGPTAEQSPD--SELFLDGIF 133 (361)
T ss_dssp -----------EEEEEECSSCE-EEEEEEEEEEEETTEEE--------EEEEEEEEEEEESGGGSSCTT--CSSCCCEEE
T ss_pred -----------CeEEEEECCce-EEEEEEEEEEEECCEEE--------eceEEEEEEeccCcccccccc--ccCCCCCEE
Confidence 69999999999 89999999999997653 4899999998765 221 345689999
Q ss_pred ecCCCC------------CcHHHHHhhcCCC-CcceeEeccCCCCCceEEeCCcCCC----CceEeeCCCCCC---ceEE
Q 011402 222 GFGKSN------------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQP---HYSI 281 (486)
Q Consensus 222 GLg~~~------------~s~~~~L~~~g~i-~~~fS~~L~~~~~~G~l~~Ggvd~~----~~~~~p~~~~~~---~~~v 281 (486)
|||++. .+++++|++||+| +++||+||.+....|.|+||++|++ ++.|+|+..... +|.|
T Consensus 134 GLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v 213 (361)
T 1mpp_A 134 GAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDA 213 (361)
T ss_dssp ECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEE
T ss_pred EeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEE
Confidence 999964 4678899999999 6999999998545799999999975 489999985544 8999
Q ss_pred EEEEEEEcCEEeecCCcccccCCCCceE-EeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCC
Q 011402 282 NMTAVQVGLDFLNLPTDVFGVGDNKGTI-IDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGF 360 (486)
Q Consensus 282 ~l~~i~v~~~~~~~~~~~~~~~~~~~~i-iDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 360 (486)
.+++|.|+++.+..+ ....+| |||||++++||++++++|++++++.+. ...+.+.++|+. .+.+
T Consensus 214 ~l~~i~v~~~~~~~~-------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~g~~~~~C~~-----~~~~ 278 (361)
T 1mpp_A 214 PVTGVKIDGSDAVSF-------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---ESQQGYTVPCSK-----YQDS 278 (361)
T ss_dssp EEEEEEETTEEEEEE-------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---EETTEEEEEHHH-----HTTC
T ss_pred EEeEEEECCeeeccC-------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---CCCCcEEEECCC-----cccC
Confidence 999999999876421 235699 999999999999999999999977542 122234467853 3456
Q ss_pred -ceEEEEEC-C-----CcEEEECCCcceEEc--CCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEE
Q 011402 361 -PNVTFHFE-N-----SVSLKVYPHEYLFPF--EDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWT 430 (486)
Q Consensus 361 -p~i~f~f~-g-----g~~~~l~~~~yi~~~--~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a 430 (486)
|+|+|+|. + |.+|+||+++|+++. ++..|+ +|+... .+.||||++|||++|+|||++++|||||
T Consensus 279 ~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~------~~~~iLG~~fl~~~yvvfD~~~~~igfa 352 (361)
T 1mpp_A 279 KTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG------GNQFIVGNLFLRFFVNVYDFGKNRIGFA 352 (361)
T ss_dssp CCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES------SSCCEEEHHHHTTEEEEEETTTTEEEEE
T ss_pred CCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC------CCCEEEChHHhccEEEEEECCCCEEEEE
Confidence 99999993 4 899999999999987 345897 777642 4679999999999999999999999999
Q ss_pred eCCCC
Q 011402 431 EYNCE 435 (486)
Q Consensus 431 ~~~~~ 435 (486)
+++|+
T Consensus 353 ~~~~~ 357 (361)
T 1mpp_A 353 PLASG 357 (361)
T ss_dssp EBCTT
T ss_pred EcccC
Confidence 99996
No 14
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.7e-57 Score=448.65 Aligned_cols=300 Identities=23% Similarity=0.391 Sum_probs=253.0
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
++.+..|+++|+||||||+++|++||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------ 67 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKN-------HHRFDPRKSSTFRNLG------------ 67 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEEE------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCC-------CCCCCCCCCcCeEcCC------------
Confidence 567889999999999999999999999999999999886 3443 4699999999999976
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||+....+... .....+||||||++.
T Consensus 68 ----------~~~~i~Yg~gs-~~G~~~~D~v~ig~~~v--------~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 126 (320)
T 4aa9_A 68 ----------KPLSIHYGTGS-MEGFLGYDTVTVSNIVD--------PNQTVGLSTEQPGEVF--TYSEFDGILGLAYPS 126 (320)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETTEEE--------EEEEEEEEEECCSHHH--HSCCCSEEEECSCGG
T ss_pred ----------cEEEEEECCcE-EEEEEEEEEEEECCEee--------cCeEEEEEEEcccccc--cccCcccEEecCccc
Confidence 69999999998 79999999999998654 4899999998765321 234579999999864
Q ss_pred ------CcHHHHHhhcCCC-CcceeEeccCCCCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEeecC
Q 011402 228 ------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (486)
Q Consensus 228 ------~s~~~~L~~~g~i-~~~fS~~L~~~~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~ 296 (486)
.+++++|++||+| +++||+||++....|.|+||++|+++ +.|+|+. ++.+|.|.+++|.|+++.+..+
T Consensus 127 ~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~ 205 (320)
T 4aa9_A 127 LASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVACV 205 (320)
T ss_dssp GSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEEST
T ss_pred ccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEeccC
Confidence 3699999999999 69999999985568999999999875 7899997 5789999999999999887532
Q ss_pred CcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEEC
Q 011402 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (486)
Q Consensus 297 ~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~ 376 (486)
....++|||||++++||++++++|.+++++.... .+.+.++| ...+.+|+|+|+| +|.+++||
T Consensus 206 -------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~----~g~~~~~C-----~~~~~~p~i~f~f-~g~~~~l~ 268 (320)
T 4aa9_A 206 -------GGCQAILDTGTSVLFGPSSDILKIQMAIGATENR----YGEFDVNC-----GNLRSMPTVVFEI-NGRDYPLS 268 (320)
T ss_dssp -------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEECT----TSCEEECG-----GGGGGCCCEEEEE-TTEEEEEC
T ss_pred -------CCcEEEEECCCCcEECCHHHHHHHHHHhCCcccC----CCcEEEeC-----CCCCcCceEEEEE-CCEEEEEC
Confidence 2467999999999999999999999999765421 22344567 3345789999999 99999999
Q ss_pred CCcceEEcCCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 377 PHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 377 ~~~yi~~~~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
+++|+.+. +..|+ ++.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 269 ~~~y~~~~-~~~C~~~i~~~~-----~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 269 PSAYTSKD-QGFCTSGFQGDN-----NSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp HHHHEEEE-TTEEEESEEEET-----TCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhccCC-CCeEEEEEEcCC-----CCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 99999874 45797 576633 13579999999999999999999999999974
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1e-56 Score=445.90 Aligned_cols=304 Identities=24% Similarity=0.440 Sum_probs=253.2
Q ss_pred CCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCC--CCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCC
Q 011402 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP 148 (486)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~--C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~ 148 (486)
+.+..|+++|+||||||++.|++||||+++||+|..|.. |.. ++.|||++|+|++..+
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------- 68 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS-------HSRFNPSESSTYSTNG------------- 68 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEEE-------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC-------CCcCCCccCCCeEECC-------------
Confidence 457899999999999999999999999999999998863 644 4699999999999865
Q ss_pred CCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC
Q 011402 149 LTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS 228 (486)
Q Consensus 149 ~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~ 228 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+... .....+||||||++..
T Consensus 69 ---------~~~~i~Yg~gs-~~G~~~~D~v~~g~~~~--------~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 69 ---------QTFSLQYGSGS-LTGFFGYDTLTVQSIQV--------PNQEFGLSENEPGTNF--VYAQFDGIMGLAYPAL 128 (329)
T ss_dssp ---------EEEEEEETTEE-EEEEEEEEEEEETTEEE--------EEEEEEEESSCSSGGG--GGCSCCEEEECCCCSC
T ss_pred ---------cEEEEEeCCCC-eEEEEEeeeEEEcceEE--------CceEEEEEEEcccccc--ccCCCceEEecCCCcc
Confidence 69999999998 59999999999997653 4899999998765321 3456899999999864
Q ss_pred ------cHHHHHhhcCCC-CcceeEeccCCC-C-CceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEeec
Q 011402 229 ------SMISQLASSGGV-RKMFAHCLDGIN-G-GGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (486)
Q Consensus 229 ------s~~~~L~~~g~i-~~~fS~~L~~~~-~-~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~ 295 (486)
+++++|++||+| +++||+||++.. . .|.|+||++|+++ +.|+|+. .+.+|.|.+++|.|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECCT
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceeee
Confidence 589999999999 699999999852 2 7999999999874 7899998 568999999999999987531
Q ss_pred CCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEE
Q 011402 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKV 375 (486)
Q Consensus 296 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l 375 (486)
......++|||||++++||++++++|.+++++.... .+.+.++|+. .+.+|+|+|+| +|.+++|
T Consensus 208 ------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~----~g~~~~~C~~-----~~~~P~i~f~f-~g~~~~i 271 (329)
T 1htr_B 208 ------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDE----YGQFLVNCNS-----IQNLPSLTFII-NGVEFPL 271 (329)
T ss_dssp ------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEECT----TSCEEECGGG-----GGGSCCEEEEE-TTEEEEE
T ss_pred ------cCCCceEEEecCCccEECCHHHHHHHHHHhCCeecC----CCeEEEeCCC-----cccCCcEEEEE-CCEEEEE
Confidence 123567999999999999999999999999765421 2234467742 35689999999 9999999
Q ss_pred CCCcceEEcCCeEEE-EEeccCccccCCCC-eeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 376 YPHEYLFPFEDLWCI-GWQNSGMQSRDRKN-MTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 376 ~~~~yi~~~~~~~C~-~i~~~~~~~~~~~~-~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
|+++|+++..+ .|+ +|+..+.... ..+ .||||++|||++|+|||++++|||||+++
T Consensus 272 ~~~~y~~~~~g-~C~~~~~~~~~~~~-~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 272 PPSSYILSNNG-YCTVGVEPTYLSSQ-NGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CHHHHEEECSS-CEEESEEEECCCCT-TSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhcccCCC-EEEEEEEECCCCCC-CCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 99999998764 897 6776542211 134 89999999999999999999999999864
No 16
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=9e-57 Score=448.85 Aligned_cols=306 Identities=21% Similarity=0.355 Sum_probs=254.8
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~ 149 (486)
++.+..|+++|+||||||+++|++||||+++||+|..|..|. ..|..++.|||++|+|++...
T Consensus 14 n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~---~~C~~~~~y~~~~SsT~~~~~-------------- 76 (341)
T 3k1w_A 14 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLY---TACVYHKLFDASDSSSYKHNG-------------- 76 (341)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTC---HHHHTSCCBCGGGCTTCEEEE--------------
T ss_pred EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCC---CcccCCCCCCCCcCcCeeECC--------------
Confidence 456789999999999999999999999999999999887321 123345799999999999855
Q ss_pred CCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCC-CCCCCCCCcceeeecCCCCC
Q 011402 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKSNS 228 (486)
Q Consensus 150 ~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~~~~ 228 (486)
|.|.+.|++|+ +.|.+++|+|+|++.. + ++.|||+....+. + .....+||||||++..
T Consensus 77 --------~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v-~~~fg~~~~~~~~~~---~~~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 77 --------TELTLRYSTGT-VSGFLSQDIITVGGIT--------V-TQMFGEVTEMPALPF---MLAEFDGVVGMGFIEQ 135 (341)
T ss_dssp --------EEEEEEETTEE-EEEEEEEEEEEETTEE--------E-EEEEEEEEECCHHHH---TTCSSSEEEECSCGGG
T ss_pred --------CEEEEEECCcE-EEEEEEEEEEEECCce--------e-eEEEEEEEEcccccc---ccCCcceEEECCchhh
Confidence 79999999998 8999999999998754 4 6899999987653 3 3456899999999765
Q ss_pred ------cHHHHHhhcCCC-CcceeEeccCCC-----CCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEE
Q 011402 229 ------SMISQLASSGGV-RKMFAHCLDGIN-----GGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDF 292 (486)
Q Consensus 229 ------s~~~~L~~~g~i-~~~fS~~L~~~~-----~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~ 292 (486)
+++++|++||+| +++||+||.+.. ..|.|+||++|+++ +.|+|+. ++.+|.|.+++|.|+++.
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGSST 214 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEECCEEETTEE
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEEeEEEECCEE
Confidence 589999999999 699999999752 37999999999875 7899998 678999999999999987
Q ss_pred eecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcE
Q 011402 293 LNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVS 372 (486)
Q Consensus 293 ~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~ 372 (486)
+.. .....++|||||++++||++++++|++++++.... .+ +.++| .....+|+|+|+| +|.+
T Consensus 215 ~~~-------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~----~g-~~~~C-----~~~~~~p~i~f~f-~g~~ 276 (341)
T 3k1w_A 215 LLC-------EDGCLALVDTGASYISGSTSSIEKLMEALGAKKRL----FD-YVVKC-----NEGPTLPDISFHL-GGKE 276 (341)
T ss_dssp EEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECS----SC-EEEEG-----GGGGGCCCEEEEE-TTEE
T ss_pred eec-------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeecC----CC-eEEeC-----CCCCcCCcEEEEE-CCEE
Confidence 532 23467999999999999999999999999776531 12 44567 3345689999999 8999
Q ss_pred EEECCCcceEEc---CCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 373 LKVYPHEYLFPF---EDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 373 ~~l~~~~yi~~~---~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
++||+++|+++. ++..|+ +|...+.+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 277 ~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~-~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 277 YTLTSADYVFQESYSSKKLCTLAIHAMDIPP-PTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EEECHHHHBCCSCCCTTSEEEBSEEECCCCT-TTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHheeEccCCCCCeEEeEEEecccCC-CCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999999999876 357897 677643221 124679999999999999999999999999975
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.2e-56 Score=445.14 Aligned_cols=299 Identities=26% Similarity=0.402 Sum_probs=246.7
Q ss_pred CCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCC
Q 011402 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (486)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~ 150 (486)
..+..|+++|+||||+|++.|+|||||+++||+|..|..|.. ..++.|||++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-----~~~~~y~~~~SsT~~~~~--------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSA-----TGHAIYTPSKSSTSKKVS--------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHH-----TTSCCBCGGGCTTCEECT---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCcccc-----CCCCcCCcccCcCceEcC---------------
Confidence 457899999999999999999999999999999999987642 234799999999999864
Q ss_pred CCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC--
Q 011402 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (486)
Q Consensus 151 ~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (486)
.|.|.+.|++|+.+.|.+++|+|+|++..+ +++.|||++..++.+. .....+||||||++..
T Consensus 72 ------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v--------~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 72 ------GASWSISYGDGSSSSGDVYTDKVTIGGFSV--------NTQGVESATRVSTEFV--QDTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ------TCBEEEECTTSCEEEEEEEEEEEEETTEEE--------EEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCC
T ss_pred ------CCeEEEEeCCCCcEEEEEEEEEEEECCEEE--------cceEEEEEEecCcccc--ccCCCceeEEeCcccccc
Confidence 279999999999889999999999997653 4899999998765432 1245899999999643
Q ss_pred -------cHHHHHhhcCCC-CcceeEeccCCCCCceEEeCCcCCC----CceEeeCCCCCCceEEEEEEEEEcCEEeecC
Q 011402 229 -------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (486)
Q Consensus 229 -------s~~~~L~~~g~i-~~~fS~~L~~~~~~G~l~~Ggvd~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~ 296 (486)
+++++|+++ | +++||+||.+ +..|.|+||++|++ ++.|+|+.+++.+|.|.+++|.|+++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~-- 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS--LAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN-- 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT--SSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--
T ss_pred cCCCCCCCHHHHHHHh--cCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--
Confidence 588999986 6 7999999987 56899999999976 47899998667899999999999998653
Q ss_pred CcccccCCCCceEEeccCceeecChhHHHHHHHHHHh-hCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEE
Q 011402 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIIS-QQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKV 375 (486)
Q Consensus 297 ~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~-~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l 375 (486)
.....++|||||++++||++++++|.+++.+ .+.. ..+.+.++|+ ..+|+|+|+| +|.+++|
T Consensus 211 ------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~~---~~~~~~~~C~-------~~~P~i~f~f-~g~~~~i 273 (329)
T 3c9x_A 211 ------RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQYDN---QQEGVVFDCD-------EDLPSFSFGV-GSSTITI 273 (329)
T ss_dssp ------SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEEET---TTTEEEEETT-------CCCCCEEEEE-TTEEEEE
T ss_pred ------CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEEcC---CCCEEEEECC-------CCCCcEEEEE-CCEEEEE
Confidence 1245799999999999999999999988733 2211 1122345773 4689999999 8999999
Q ss_pred CCCcceEEc-C--CeEEEE-EeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeC
Q 011402 376 YPHEYLFPF-E--DLWCIG-WQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEY 432 (486)
Q Consensus 376 ~~~~yi~~~-~--~~~C~~-i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~ 432 (486)
|+++|+++. + ...|++ |.... +.+.||||++|||++|+|||++++|||||+.
T Consensus 274 p~~~~~~~~~~~~~~~C~~~i~~~~-----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 274 PGDLLNLTPLEEGSSTCFGGLQSSS-----GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp CGGGGEEEESSTTCSEEEESEEECT-----TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CHHHeeeeccCCCCCeEEEEEEcCC-----CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 999999875 2 368974 66543 2467999999999999999999999999984
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.5e-56 Score=444.39 Aligned_cols=297 Identities=22% Similarity=0.370 Sum_probs=245.8
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (486)
.+..|+++|+||||||++.|+|||||+++||+|..|..|.. .++.|||++|+|++.++|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~~--------------- 71 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLSG--------------- 71 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEEE---------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecCC---------------
Confidence 57899999999999999999999999999999999987742 347999999999998642
Q ss_pred CCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 011402 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (486)
Q Consensus 152 c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (486)
|.|.+.|++|+.+.|.+++|+|+|++..+ +++.|||++..++.+. .....+||||||++..
T Consensus 72 ------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v--------~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 72 ------ATWSISYGDGSSSSGDVYTDTVSVGGLTV--------TGQAVESAKKVSSSFT--EDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp ------EEEEEECTTSCEEEEEEEEEEEEETTEEE--------EEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred ------CeEEEEeCCCCcEEEEEEEEEEEECCEEE--------eeeEEEEEEecCcccc--ccCCCceEEEecccccccc
Confidence 79999999999889999999999998653 4899999998765432 1245799999999643
Q ss_pred ------cHHHHHhhcCCC-CcceeEeccCCCCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEeecCC
Q 011402 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (486)
Q Consensus 229 ------s~~~~L~~~g~i-~~~fS~~L~~~~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 297 (486)
+++++|++| | +++||+||.+ +..|.|+||++|+++ +.|+|+.+++.+|.|.+++|.|+++.+.
T Consensus 136 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--- 209 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS--LDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--- 209 (329)
T ss_dssp BSSCCCCHHHHHTTT--SSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE---
T ss_pred CcCCCCCHHHHHHHh--ccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc---
Confidence 588999987 6 7999999987 568999999999764 7899998667899999999999997653
Q ss_pred cccccCCCCceEEeccCceeecChhHHHHHHHHHH-hhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEEC
Q 011402 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII-SQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (486)
Q Consensus 298 ~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~-~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~ 376 (486)
.....++|||||+++++|++++++|++++. +.+.. ..+.+.++|+ ..+|+|+|+| +|.+++||
T Consensus 210 -----~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~~~---~~g~~~~~C~-------~~~P~i~f~f-gg~~~~ip 273 (329)
T 1oew_A 210 -----STSIDGIADTGTTLLYLPATVVSAYWAQVSGAKSSS---SVGGYVFPCS-------ATLPSFTFGV-GSARIVIP 273 (329)
T ss_dssp -----EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCEEET---TTTEEEEETT-------CCCCCEEEEE-TTEEEEEC
T ss_pred -----CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcEEcC---CCCEEEEECC-------CCCCcEEEEE-CCEEEEEC
Confidence 123569999999999999999999998873 33211 1122345673 4689999999 99999999
Q ss_pred CCcceEEc---CCeEEEE-EeccCccccCCCCeeeechhhhceeEEEEEC-CCCEEEEEeC
Q 011402 377 PHEYLFPF---EDLWCIG-WQNSGMQSRDRKNMTLLGDLVLSNKLVLYDL-ENQVIGWTEY 432 (486)
Q Consensus 377 ~~~yi~~~---~~~~C~~-i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~-~~~rIg~a~~ 432 (486)
+++|+++. +...|++ |.... +.+.||||++|||++|+|||+ +++|||||+.
T Consensus 274 ~~~~~~~~~~~~~~~C~~~i~~~~-----~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 274 GDYIDFGPISTGSSSCFGGIQSSA-----GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp HHHHEEEESSTTCSEEEESEEEST-----TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred HHHeeeeecCCCCCeEEEEEEeCC-----CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 99999875 2468975 65543 246899999999999999999 9999999984
No 19
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=5.6e-56 Score=458.94 Aligned_cols=312 Identities=24% Similarity=0.368 Sum_probs=250.6
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~ 149 (486)
++.+..|+++|+||||||+|.|+|||||+++||+|..|.. ...|..++.|||++|+||+..+
T Consensus 48 n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~----~~~C~~~~~y~~~~SsT~~~~~-------------- 109 (478)
T 1qdm_A 48 NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYF----SIACYLHSRYKAGASSTYKKNG-------------- 109 (478)
T ss_dssp CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCS----CGGGGGSCCBCGGGCTTCBCCC--------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCC----CccccCCCCCCcccCCCeeeCC--------------
Confidence 4567899999999999999999999999999999988851 1123345699999999999854
Q ss_pred CCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC-
Q 011402 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (486)
Q Consensus 150 ~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (486)
+.|.+.|++|+ +.|.+++|+|+|++..+ +++.||+++...+..+ .....+||||||++..
T Consensus 110 --------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v--------~~~~Fg~a~~~~~~~f--~~~~~dGIlGLg~~~~s 170 (478)
T 1qdm_A 110 --------KPAAIQYGTGS-IAGYFSEDSVTVGDLVV--------KDQEFIEATKEPGITF--LVAKFDGILGLGFKEIS 170 (478)
T ss_dssp --------CEEEEEETTEE-EEEEEEEEEEEETTEEE--------EEEEEEEEEECCBSHH--HHCSSSEEEECSCGGGC
T ss_pred --------cEEEEEcCCCC-eEEEEEEEEEEECCeEE--------CCEEEEEEEecCCccc--ccccccceecccccccc
Confidence 79999999998 89999999999998654 3799999988654311 2346799999999865
Q ss_pred -----cHHHHHhhcCCC-CcceeEeccCC---CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEeec
Q 011402 229 -----SMISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (486)
Q Consensus 229 -----s~~~~L~~~g~i-~~~fS~~L~~~---~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~ 295 (486)
+++.+|++||+| +++||+||++. ..+|.|+||++|+++ +.|+|+. .+.+|.|.+++|.|+++.+.+
T Consensus 171 ~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~ 249 (478)
T 1qdm_A 171 VGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFDMGDVLVGGKSTGF 249 (478)
T ss_dssp GGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEEECCEEETTEECST
T ss_pred cCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEEEeEEEECCEEEee
Confidence 478899999999 69999999874 357999999999875 7899997 568999999999999988754
Q ss_pred CCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCC----------------------CC---------------
Q 011402 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP----------------------DL--------------- 338 (486)
Q Consensus 296 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~----------------------~~--------------- 338 (486)
+. ....+++||||+++++|.+++++|.+++++... ..
T Consensus 250 ~~------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~ 323 (478)
T 1qdm_A 250 CA------GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFD 323 (478)
T ss_dssp TT------TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---
T ss_pred cC------CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccC
Confidence 32 356799999999999999999999999865310 00
Q ss_pred ---------------------------------------------------------------cccccCCCCceeecCCC
Q 011402 339 ---------------------------------------------------------------KVHTVHDEYTCFQYSES 355 (486)
Q Consensus 339 ---------------------------------------------------------------~~~~~~~~~~C~~~~~~ 355 (486)
....+.+.++| +
T Consensus 324 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C-----~ 398 (478)
T 1qdm_A 324 GTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDC-----G 398 (478)
T ss_dssp ------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECG-----G
T ss_pred ccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeec-----c
Confidence 00011223445 3
Q ss_pred ccCCCceEEEEECCCcEEEECCCcceEEcC---CeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEe
Q 011402 356 VDEGFPNVTFHFENSVSLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTE 431 (486)
Q Consensus 356 ~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~---~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~ 431 (486)
....+|+|+|+| +|++++|+|++|+++.. ...|+ +|...+++.. ..+.||||+.|||++|+|||++++|||||+
T Consensus 399 ~~~~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~-~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~ 476 (478)
T 1qdm_A 399 SLGSMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPP-RGPLWILGDVFMGPYHTVFDYGKLRIGFAK 476 (478)
T ss_dssp GGTTCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTT-SCSEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred cccccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCC-CCCcEEECHHHhccEEEEEECCCCEEEEEe
Confidence 345789999999 99999999999999873 35897 5765543222 246899999999999999999999999998
Q ss_pred C
Q 011402 432 Y 432 (486)
Q Consensus 432 ~ 432 (486)
+
T Consensus 477 a 477 (478)
T 1qdm_A 477 A 477 (478)
T ss_dssp E
T ss_pred C
Confidence 6
No 20
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-55 Score=447.30 Aligned_cols=323 Identities=22% Similarity=0.355 Sum_probs=254.4
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (486)
.+..|+++|+||||||++.|+|||||+++||+|..|..|. +.|||++|+||+..+
T Consensus 11 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~~---------------- 65 (383)
T 2ewy_A 11 SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSKG---------------- 65 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEEE----------------
T ss_pred CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeCC----------------
Confidence 4568999999999999999999999999999998886653 589999999999976
Q ss_pred CCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 011402 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (486)
Q Consensus 152 c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (486)
|.|.+.|++|+ +.|.+++|+|+|++.... ...+.|++.....+.+. .....+||||||++..
T Consensus 66 ------~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~dGilGLg~~~~s~~ 130 (383)
T 2ewy_A 66 ------FDVTVKYTQGS-WTGFVGEDLVTIPKGFNT------SFLVNIATIFESENFFL--PGIKWNGILGLAYATLAKP 130 (383)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEEETTTEEE------EEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred ------ceEEEEECCcE-EEEEEEEEEEEECCCccc------eeEEEEEEEEeecceee--ccCcCceEEecCchhcccc
Confidence 69999999998 699999999999863211 11366888766554442 2346799999999653
Q ss_pred -----cHHHHHhhcCCCCcceeEeccC--------CCCCceEEeCCcCCC----CceEeeCCCCCCceEEEEEEEEEcCE
Q 011402 229 -----SMISQLASSGGVRKMFAHCLDG--------INGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (486)
Q Consensus 229 -----s~~~~L~~~g~i~~~fS~~L~~--------~~~~G~l~~Ggvd~~----~~~~~p~~~~~~~~~v~l~~i~v~~~ 291 (486)
+++++|++|+.++++||+||++ ...+|.|+||++|++ ++.|+|+. ...+|.|.+++|.|+++
T Consensus 131 ~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~ 209 (383)
T 2ewy_A 131 SSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGGQ 209 (383)
T ss_dssp CTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETTE
T ss_pred cccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECCE
Confidence 5889999999888899999963 145799999999975 48899998 46799999999999999
Q ss_pred EeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccc---cCCCCceeecCCCccCCCceEEEEEC
Q 011402 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYSESVDEGFPNVTFHFE 368 (486)
Q Consensus 292 ~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~p~i~f~f~ 368 (486)
.+.++...|. ...++|||||++++||++++++|++++.+......... ..+.++|+.........+|+|+|+|.
T Consensus 210 ~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~ 286 (383)
T 2ewy_A 210 SLNLDCREYN---ADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLR 286 (383)
T ss_dssp ECCCCTTTTT---SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEE
T ss_pred EccccccccC---CccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEEC
Confidence 9876554332 46799999999999999999999999988754211111 12346898654333346899999994
Q ss_pred CC-----cEEEECCCcceEEc----CCeEEEEE--eccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCCCCCC
Q 011402 369 NS-----VSLKVYPHEYLFPF----EDLWCIGW--QNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYNCECS 437 (486)
Q Consensus 369 gg-----~~~~l~~~~yi~~~----~~~~C~~i--~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~~~~~ 437 (486)
|+ .+++||+++|+.+. .+..|+++ ... .+.||||++|||++|+|||++++|||||+++|+..
T Consensus 287 g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~-------~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 359 (383)
T 2ewy_A 287 DENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS-------TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEI 359 (383)
T ss_dssp CSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE-------SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBS
T ss_pred CCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC-------CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCc
Confidence 33 37999999999875 25689753 332 35699999999999999999999999999999632
Q ss_pred CCeeeeeC
Q 011402 438 SSIKVRDE 445 (486)
Q Consensus 438 ~~~~i~~~ 445 (486)
...+|+..
T Consensus 360 ~~~~i~~i 367 (383)
T 2ewy_A 360 AGAAVSEI 367 (383)
T ss_dssp SSCBCEEE
T ss_pred CCcceeee
Confidence 34444443
No 21
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2e-55 Score=447.48 Aligned_cols=321 Identities=22% Similarity=0.326 Sum_probs=255.2
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (486)
.+..|+++|+||||||++.|+|||||+++||+|..|..|. +.|||++|+||+..+
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~---------~~y~~~~SsT~~~~~---------------- 73 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH---------RYYQRQLSSTYRDLR---------------- 73 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS---------CCCCGGGCTTCEEEE----------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc---------CCcCcccCCCceeCC----------------
Confidence 4568999999999999999999999999999998876542 589999999999976
Q ss_pred CCCCCCCeeeEEeCCCCeEeEEEEEEEEEEe-cccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC---
Q 011402 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYD-KVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (486)
Q Consensus 152 c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig-~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~--- 227 (486)
|.|.+.|++|+ +.|.+++|+|+|+ +.... ..+.|++.....+.|. .....+||||||++.
T Consensus 74 ------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~g~~~~-------~~~~~~~~~~~~~~f~--~~~~~dGIlGLg~~~~s~ 137 (395)
T 2qp8_A 74 ------KGVYVPYTQGK-WEGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 137 (395)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred ------ceEEEEECCcE-EEEEEEeEEEEECCCCCce-------EEEEEEEEEccCcccc--cccCccceEEcCchhhcc
Confidence 69999999998 5999999999998 33322 1356787776554442 234689999999965
Q ss_pred -----CcHHHHHhhcCCCCcceeEeccCC-----------CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEE
Q 011402 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQ 287 (486)
Q Consensus 228 -----~s~~~~L~~~g~i~~~fS~~L~~~-----------~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~ 287 (486)
.+++++|++|+.|+++||+||++. ..+|.|+||++|+++ +.|+|+. ++.+|.|.+++|.
T Consensus 138 ~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 216 (395)
T 2qp8_A 138 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 216 (395)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred CCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEE
Confidence 368899999999988999999752 357999999999874 7899998 4679999999999
Q ss_pred EcCEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccc---cCCCCceeecCCCccCCCceEE
Q 011402 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYSESVDEGFPNVT 364 (486)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~p~i~ 364 (486)
|+++.+.++...|. ...+||||||++++||++++++|++++.+......... ..+.++|+.........+|+|+
T Consensus 217 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 293 (395)
T 2qp8_A 217 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 293 (395)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred ECCEEcccCccccC---CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEE
Confidence 99999876654442 45799999999999999999999999998754211111 1234789865443344689999
Q ss_pred EEECCCc-----EEEECCCcceEEcC-----CeEEE--EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeC
Q 011402 365 FHFENSV-----SLKVYPHEYLFPFE-----DLWCI--GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEY 432 (486)
Q Consensus 365 f~f~gg~-----~~~l~~~~yi~~~~-----~~~C~--~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~ 432 (486)
|+|.|+. +++|+|++|+.+.. ...|+ ++... .+.||||++|||++|+|||++++|||||++
T Consensus 294 f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-------~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~ 366 (395)
T 2qp8_A 294 LYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-------STGTVMGAVIMEGFYVVFDRARKRIGFAVS 366 (395)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-------SSCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC-------CCcEEEChHHhCCeeEEEECCCCEEEEEec
Confidence 9994432 79999999998752 24896 45432 357999999999999999999999999999
Q ss_pred CCCCCCCeeeee
Q 011402 433 NCECSSSIKVRD 444 (486)
Q Consensus 433 ~~~~~~~~~i~~ 444 (486)
+|+.....+++.
T Consensus 367 ~c~~~~~~~i~~ 378 (395)
T 2qp8_A 367 ACHVHDEFRTAA 378 (395)
T ss_dssp TTCCCCSSCCCE
T ss_pred cCCCCCCCccce
Confidence 996323444443
No 22
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.2e-56 Score=448.91 Aligned_cols=295 Identities=20% Similarity=0.375 Sum_probs=249.2
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
++.+..|+++|+||||||++.|+|||||+++||+|..|. .|.. ++.|||++|+|++...
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------ 118 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI-------KNLYDSSKSKSYEKDG------------ 118 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG-------SCCBCGGGCTTCEEEE------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC-------CCcCCCccCCceEECC------------
Confidence 356789999999999999999999999999999999885 4543 4699999999999865
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeee----ccCCCCCCCCCCcceeeec
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGL 223 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ ++ .|||++. ++ .| .....+|||||
T Consensus 119 ----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v--------~~-~Fg~~~~~~~~~~-~f---~~~~~dGilGL 174 (375)
T 1miq_A 119 ----------TKVDITYGSGT-VKGFFSKDLVTLGHLSM--------PY-KFIEVTDTDDLEP-IY---SSVEFDGILGL 174 (375)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETTEEE--------EE-EEEEEEECGGGTT-HH---HHSCCCEEEEC
T ss_pred ----------cEEEEEeCCCe-EEEEEEEEEEEEcCceE--------Cc-EEEEEEecccccc-cc---ccCCCceEEeC
Confidence 69999999999 89999999999997653 37 9999998 44 33 23467999999
Q ss_pred CCCCC------cHHHHHhhcCCC-CcceeEeccCC-CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCE
Q 011402 224 GKSNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLD 291 (486)
Q Consensus 224 g~~~~------s~~~~L~~~g~i-~~~fS~~L~~~-~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~ 291 (486)
|++.. +++++|++||+| +++||+||++. ..+|.|+|||+|+++ +.|+|+. .+.+|.|.++ |.|+++
T Consensus 175 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~ 252 (375)
T 1miq_A 175 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQ 252 (375)
T ss_dssp SSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCE
Confidence 99764 689999999999 69999999985 357999999999864 7899997 5689999999 999998
Q ss_pred EeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCc
Q 011402 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSV 371 (486)
Q Consensus 292 ~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~ 371 (486)
.+ ....++|||||+++++|.+++++|.+++++.+.. ..+.+.++|+. ..+|+|+|+| +|.
T Consensus 253 ~~----------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~---~~g~~~~~C~~------~~~P~i~f~f-~g~ 312 (375)
T 1miq_A 253 TM----------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKVP---FLPFYVTTCDN------KEMPTLEFKS-ANN 312 (375)
T ss_dssp EE----------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEECT---TSSCEEEETTC------TTCCCEEEEC-SSC
T ss_pred Ec----------ccceEEecCCCccEEcCHHHHHHHHHHhCCcccC---CCCeEEEECCC------CCCCcEEEEE-CCE
Confidence 76 1356999999999999999999999999775431 12234467742 5689999999 999
Q ss_pred EEEECCCcceEEc---CCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 372 SLKVYPHEYLFPF---EDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 372 ~~~l~~~~yi~~~---~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
+++||+++|+++. ++..|+ +|+..+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 313 ~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~----~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 313 TYTLEPEYYMNPILEVDDTLCMITMLPVDI----DSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EEEECGGGSEEESSSSSCSEEEESEEECCS----SSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHhEeeccCCCCCeEEEEEEECCC----CCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999999999987 245897 7876542 12689999999999999999999999999974
No 23
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.5e-55 Score=455.81 Aligned_cols=313 Identities=22% Similarity=0.319 Sum_probs=253.5
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (486)
.+..|+++|+||||||+++|+|||||+++||+|..| |.. ++.|||++|+||+..+
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~-------~~~y~~~~SsT~~~~~---------------- 126 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDLR---------------- 126 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc-------CCcccCCCCCCcccCC----------------
Confidence 456899999999999999999999999999999887 432 3699999999999976
Q ss_pred CCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecc-cCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC---
Q 011402 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKV-SGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (486)
Q Consensus 152 c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~-~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~--- 227 (486)
|.|.+.|++|+ +.|.+++|+|+|++. .+. ..+.|+++......+. .....+||||||++.
T Consensus 127 ------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~ 190 (455)
T 3lpj_A 127 ------KGVYVPYTQGK-WEGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 190 (455)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred ------ccEEEEeCCeE-EEEEEEEEEEEECCCccee-------eEEEEEEEEccCcccc--cCCCcceEEEeCcccccc
Confidence 69999999999 699999999999852 221 1356888877665542 235689999999864
Q ss_pred -----CcHHHHHhhcCCCCcceeEeccCC-----------CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEE
Q 011402 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQ 287 (486)
Q Consensus 228 -----~s~~~~L~~~g~i~~~fS~~L~~~-----------~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~ 287 (486)
.+++++|++|+.|+++||+||.+. ...|.|+||++|+++ +.|+|+. ...+|.|.+++|.
T Consensus 191 ~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 269 (455)
T 3lpj_A 191 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 269 (455)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred ccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEE
Confidence 378999999999988999999742 457999999999875 7899998 4689999999999
Q ss_pred EcCEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccc---cCCCCceeecCCCccCCCceEE
Q 011402 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYSESVDEGFPNVT 364 (486)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~p~i~ 364 (486)
|+++.+.++...+. ...++|||||++++||.+++++|++++++......... ..+.++|+.........+|+|+
T Consensus 270 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~ 346 (455)
T 3lpj_A 270 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 346 (455)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred ECCEEccccccccC---CCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEE
Confidence 99999876654332 46799999999999999999999999998854211111 2235799865443344689999
Q ss_pred EEECCCc------EEEECCCcceEEcC-----CeEEEEEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 365 FHFENSV------SLKVYPHEYLFPFE-----DLWCIGWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 365 f~f~gg~------~~~l~~~~yi~~~~-----~~~C~~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
|+| +|. +|+|++++|+.+.. ...|+++.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 347 f~f-~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~-----~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 347 LYL-MGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ-----SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp EEE-ECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE-----ESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred EEE-cCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccC-----CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 999 554 59999999999862 24898642211 13679999999999999999999999999999
Q ss_pred CC
Q 011402 434 CE 435 (486)
Q Consensus 434 ~~ 435 (486)
|+
T Consensus 421 c~ 422 (455)
T 3lpj_A 421 CH 422 (455)
T ss_dssp TC
T ss_pred cc
Confidence 96
No 24
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.7e-55 Score=447.67 Aligned_cols=321 Identities=22% Similarity=0.321 Sum_probs=254.0
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (486)
....|+++|+||||||+++|+|||||+++||+|..| |.. ++.|+|++|+||+...
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~-------~~~y~~~~SsT~~~~~---------------- 80 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDLR---------------- 80 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Ccc-------cCCcCcccCcccccCC----------------
Confidence 346899999999999999999999999999999887 432 3689999999999976
Q ss_pred CCCCCCCeeeEEeCCCCeEeEEEEEEEEEEec-ccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC---
Q 011402 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (486)
Q Consensus 152 c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~--- 227 (486)
|.|.+.|++|+ +.|.+++|+|+|++ ..+. ..+.|+++....+.+. .....+||||||++.
T Consensus 81 ------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 81 ------KGVYVPYTQGK-WEGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred ------CEEEEEECcEE-EEEEEEEEEEEECCccccc-------eeeeEEEEEccccccc--cCCCccceEEcCchhhcc
Confidence 69999999999 69999999999984 3222 1245788776665442 235689999999864
Q ss_pred -----CcHHHHHhhcCCCCcceeEeccCC-----------CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEE
Q 011402 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQ 287 (486)
Q Consensus 228 -----~s~~~~L~~~g~i~~~fS~~L~~~-----------~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~ 287 (486)
.+++++|++|+.|+++||+||.+. ...|.|+||++|+++ +.|+|+. .+.+|.|.+++|.
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEE
Confidence 478999999999988999999741 347999999999875 7899998 4689999999999
Q ss_pred EcCEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccc---cCCCCceeecCCCccCCCceEE
Q 011402 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYSESVDEGFPNVT 364 (486)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~p~i~ 364 (486)
|+++.+.++...+. ...++|||||++++||.+++++|++++++......... ..+.++|+.........+|+|+
T Consensus 224 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 300 (402)
T 3vf3_A 224 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 300 (402)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEE
T ss_pred ECCEEecccccccC---CCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceE
Confidence 99999876554332 46799999999999999999999999998853111111 1235799876544444789999
Q ss_pred EEECCCc------EEEECCCcceEEcCC-----eEEEEEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 365 FHFENSV------SLKVYPHEYLFPFED-----LWCIGWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 365 f~f~gg~------~~~l~~~~yi~~~~~-----~~C~~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
|+| +|. +++|||++|+.+... ..|+++.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 301 f~f-~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~-----~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 301 LYL-MGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ-----SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp EEE-ECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE-----ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred EEE-ecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccC-----CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 999 554 599999999998622 4898532211 13679999999999999999999999999999
Q ss_pred CCCCCCeeee
Q 011402 434 CECSSSIKVR 443 (486)
Q Consensus 434 ~~~~~~~~i~ 443 (486)
|+.....++.
T Consensus 375 c~~~~~~~i~ 384 (402)
T 3vf3_A 375 CHVHDEFRTA 384 (402)
T ss_dssp TCCBCSSCBC
T ss_pred cCcccCcccc
Confidence 9633444443
No 25
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=5.3e-55 Score=445.09 Aligned_cols=344 Identities=23% Similarity=0.383 Sum_probs=259.8
Q ss_pred cCcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCc
Q 011402 60 VDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQE 139 (486)
Q Consensus 60 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~ 139 (486)
+..|+.. +..+++|+++|+||||||++.|+|||||+++||+|..| .+|+|++.++|.++
T Consensus 10 ~~~pl~~---~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s~ 68 (403)
T 3aup_A 10 VVLPVQN---DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHST 68 (403)
T ss_dssp EEEEEEE---CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTBH
T ss_pred EEEeeec---CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCCc
Confidence 3456642 34678999999999999999999999999999998653 36889999999998
Q ss_pred ccCCCCCC--------CCCCCCCCCCCeeeEEeC-CCCeEeEEEEEEEEEEecccCCcc---ccccCcceEEeeeeeccC
Q 011402 140 FCHGVYGG--------PLTDCTANTSCPYLEIYG-DGSSTTGYFVQDVVQYDKVSGDLQ---TTSTNGSLIFGCGARQSG 207 (486)
Q Consensus 140 ~C~~~~~~--------~~~~c~~~~~~~~~i~Y~-dg~~~~G~~~~D~v~ig~~~~~~~---~~~~~~~~~fg~~~~~~~ 207 (486)
.|...+.. ..+.|. ++.|.|.+.|+ ||+.+.|.+++|+|+|++.....+ ....++++.|||+.....
T Consensus 69 ~C~~~~~~~c~~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~ 147 (403)
T 3aup_A 69 QCSRANTHQCLSCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLV 147 (403)
T ss_dssp HHHHTTCCCEEECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGG
T ss_pred cccCccccCccccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccc
Confidence 88765432 123454 36799999998 788899999999999998432210 002356899999998754
Q ss_pred C-CCCCCCCCcceeeecCCCCCcHHHHHhhcCCCCcceeEeccCC-CCCceEEeCCcCC-------C-----CceEeeCC
Q 011402 208 N-LDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ-------P-----EVNKTPLV 273 (486)
Q Consensus 208 ~-~~~~~~~~~~GIlGLg~~~~s~~~~L~~~g~i~~~fS~~L~~~-~~~G~l~~Ggvd~-------~-----~~~~~p~~ 273 (486)
. + .....+||||||++..+++.+|++..+.+++||+||.+. ..+|.|+||+ |+ . ++.|+|++
T Consensus 148 ~~~---~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~ 223 (403)
T 3aup_A 148 QKG---LPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLT 223 (403)
T ss_dssp SSS---SSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECE
T ss_pred ccC---CCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccc
Confidence 3 2 235689999999999999999976554479999999875 5689999999 63 2 68999998
Q ss_pred CC-CCceEEEEEEEEEcCEEe-ecCCcccc--cCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCccc-ccCCCCc
Q 011402 274 PN-QPHYSINMTAVQVGLDFL-NLPTDVFG--VGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVH-TVHDEYT 348 (486)
Q Consensus 274 ~~-~~~~~v~l~~i~v~~~~~-~~~~~~~~--~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~-~~~~~~~ 348 (486)
.+ ..+|.|.+++|.|+++.+ .++...+. ..+..++||||||++++||++++++|.+++.+.+...... .......
T Consensus 224 ~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 303 (403)
T 3aup_A 224 ITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGL 303 (403)
T ss_dssp ECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSC
T ss_pred cCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCc
Confidence 65 369999999999999988 66655442 1235679999999999999999999999997665321110 0011224
Q ss_pred eeecCCCccCCCceEEEEECCC--cEEEECCCcceEEc-CCeEEEEEeccCccccCCCCeeeechhhhceeEEEEECCCC
Q 011402 349 CFQYSESVDEGFPNVTFHFENS--VSLKVYPHEYLFPF-EDLWCIGWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQ 425 (486)
Q Consensus 349 C~~~~~~~~~~~p~i~f~f~gg--~~~~l~~~~yi~~~-~~~~C~~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ 425 (486)
|+.. +..+.+|+|+|+|.|+ ++|+||+++|+++. ++..|++|+.... +..+.||||+.|||++|+|||++++
T Consensus 304 c~~c--~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~---~~~~~~ILG~~fl~~~yvvfD~~~~ 378 (403)
T 3aup_A 304 CFNS--NKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGM---QPRAEITLGARQLEENLVVFDLARS 378 (403)
T ss_dssp EECG--GGCCCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCS---CCSSSEEECHHHHTTSCEEEETTTT
T ss_pred eEEC--CCcCcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCC---CCCCcEEEChHHhcCeEEEEECCCC
Confidence 7643 3334789999999444 59999999999987 4568998887652 1135799999999999999999999
Q ss_pred EEEE-------EeCCC
Q 011402 426 VIGW-------TEYNC 434 (486)
Q Consensus 426 rIg~-------a~~~~ 434 (486)
|||| ++++|
T Consensus 379 rIGf~A~~~~~~~~~C 394 (403)
T 3aup_A 379 RVGFSTSSLHSHGVKC 394 (403)
T ss_dssp EEEEESSCGGGGTCCG
T ss_pred EEEEecccccccCCCc
Confidence 9999 55666
No 26
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=3.6e-55 Score=448.91 Aligned_cols=295 Identities=21% Similarity=0.359 Sum_probs=248.7
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
++.+..|+++|+||||||++.|++||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 133 n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~-------~~~ydps~SsT~~~~~------------ 193 (451)
T 3qvc_A 133 DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES-------KNHYDSSKSKTYEKDD------------ 193 (451)
T ss_dssp GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT-------SCCBCGGGCTTCEEEE------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC-------CCCCCCCCCcccccCC------------
Confidence 456789999999999999999999999999999999884 5654 4699999999999865
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeee----ccCCCCCCCCCCcceeeec
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGL 223 (486)
+.|.+.|++|+ +.|.+++|+|++|+.. ++ +.||++.. .++ + .....+|||||
T Consensus 194 ----------~~f~i~YgdGs-~~G~~~~Dtv~igg~~--------v~-~~Fg~a~~t~~~~~~-f---~~~~~dGILGL 249 (451)
T 3qvc_A 194 ----------TPVKLTSKAGT-ISGIFSKDLVTIGKLS--------VP-YKFIEMTEIVGFEPF-Y---SESDVDGVFGL 249 (451)
T ss_dssp ----------EEEEEECSSEE-EEEEEEEEEEEETTEE--------EE-EEEEEEEEEEECTTH-H---HHSCCCEEEEC
T ss_pred ----------CEEEEEECCCE-EEEEEEEEEEEECCEE--------EE-EEEEEEEeccccCCC-c---cCCCCCEEEec
Confidence 79999999999 8999999999998754 45 89999988 544 3 23457999999
Q ss_pred CCCC------CcHHHHHhhcCCC-CcceeEeccCC-CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCE
Q 011402 224 GKSN------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLD 291 (486)
Q Consensus 224 g~~~------~s~~~~L~~~g~i-~~~fS~~L~~~-~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~ 291 (486)
|++. .+++++|++||+| +++||+||++. ..+|.|+|||+|+++ +.|+|+. ++.+|.|.++ |.|+++
T Consensus 250 g~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~ 327 (451)
T 3qvc_A 250 GWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV 327 (451)
T ss_dssp SSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc
Confidence 9975 3799999999999 69999999986 457999999999875 7899998 6789999999 999998
Q ss_pred EeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCc
Q 011402 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSV 371 (486)
Q Consensus 292 ~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~ 371 (486)
. .....+++||||+++++|++++++|.+++++.... ..+.+.++| . ...+|+|+|+| +|.
T Consensus 328 -~---------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~---~~g~y~v~C-----~-~~~~P~itf~f-gg~ 387 (451)
T 3qvc_A 328 -S---------SKKANVILDSATSVITVPTEFFNQFVESASVFKVP---FLSLYVTTC-----G-NTKLPTLEYRS-PNK 387 (451)
T ss_dssp -E---------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECT---TSSCEEEET-----T-CTTCCCEEEEE-TTE
T ss_pred -c---------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeecC---CCCeEEeeC-----C-cCcCCcEEEEE-CCE
Confidence 1 12456999999999999999999999999766432 122333556 4 46789999999 999
Q ss_pred EEEECCCcceEEcC---CeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 372 SLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 372 ~~~l~~~~yi~~~~---~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
+++||+++|+.+.. +..|+ ++...+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 388 ~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~----~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 388 VYTLEPKQYLEPLENIFSALCMLNIVPIDL----EKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEEECHHHHEEECTTTSTTEEEECEEECCC----STTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEcHHHheeecccCCCCeEEEEEEeCCC----CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999999862 46786 6766541 14689999999999999999999999999974
No 27
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.9e-55 Score=435.23 Aligned_cols=297 Identities=17% Similarity=0.254 Sum_probs=247.9
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
++.+..|+++|+|| ||++.|+|||||+++||+|..|. .|.. ..++.|||++| |++..+
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----~~~~~y~~~~S-T~~~~~------------ 72 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVC-----PNLQKYEKLKP-KYISDG------------ 72 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGS-----TTCCCCCCSSC-EEEEEE------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcc-----cccCccCCCCC-ceEECC------------
Confidence 45678999999999 89999999999999999999886 5621 23469999999 999854
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (486)
+.|.+.|++|+ +.|.+++|+|+|++..+ +++.||+++.....| .....+||||||++.
T Consensus 73 ----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~~--------~~~~fg~~~~~~~~f---~~~~~~GilGLg~~~ 130 (330)
T 1yg9_A 73 ----------NVQVKFFDTGS-AVGRGIEDSLTISQLTT--------SQQDIVLADELSQEV---CILSADVVVGIAAPG 130 (330)
T ss_dssp ----------EEEEEETTTEE-EEEEEEEEEEEETTEEE--------EEEEEEEEEEECTHH---HHTTCSEEEECSCTT
T ss_pred ----------CEEEEEECCce-EEEEEEEEEEEECCEEE--------cCeEEEEEEEccccc---ccccCceEEEcCcch
Confidence 69999999998 59999999999998653 489999999874333 234679999999987
Q ss_pred Cc-------HHHHHhhcCCCCcceeEeccCC-CC--CceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEe
Q 011402 228 SS-------MISQLASSGGVRKMFAHCLDGI-NG--GGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFL 293 (486)
Q Consensus 228 ~s-------~~~~L~~~g~i~~~fS~~L~~~-~~--~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~ 293 (486)
.+ ++++|++||+|+++||+||++. +. .|.|+||++|+++ +.|+|+. .+.+|.|.+++|.|+++.+
T Consensus 131 ~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~ 209 (330)
T 1yg9_A 131 CPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTTV 209 (330)
T ss_dssp SCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEEE
T ss_pred hccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEEE
Confidence 65 9999999998888999999875 22 7999999999875 7899998 6789999999999999876
Q ss_pred ecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCccccc--CC-CCceeecCCCccCCCceEEEEECCC
Q 011402 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTV--HD-EYTCFQYSESVDEGFPNVTFHFENS 370 (486)
Q Consensus 294 ~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~--~~-~~~C~~~~~~~~~~~p~i~f~f~gg 370 (486)
. ..+..+++||||+++++|++++++|.+++++... ..+ .+ .++| ...+.+|+|+|+| +|
T Consensus 210 ~--------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~g~~~~~~~~C-----~~~~~~p~i~f~f-gg 271 (330)
T 1yg9_A 210 A--------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE----KTTTRRICKLDC-----SKIPSLPDVTFVI-NG 271 (330)
T ss_dssp E--------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE----ECSSCEEEEECG-----GGGGGSCCEEEEE-TT
T ss_pred c--------CCCcEEEEecCCccccCCHHHHHHHHHHhCCccc----CCCceEEEEEEC-----CCccccCcEEEEE-CC
Confidence 4 2246799999999999999999999999976532 111 23 3456 3345689999999 99
Q ss_pred cEEEECCCcceEEcCCeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 371 VSLKVYPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 371 ~~~~l~~~~yi~~~~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
.+++||+++|+++. +..|+ +|.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 272 ~~~~l~~~~y~~~~-~~~C~~~i~~~~-----~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 272 RNFNISSQYYIQQN-GNLCYSGFQPCG-----HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEEEECHHHHEEEE-TTEEEESEEEET-----TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEECHHHhcccC-CCcEEEEEEeCC-----CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99999999999987 56897 666542 14679999999999999999999999999974
No 28
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.1e-55 Score=450.03 Aligned_cols=297 Identities=20% Similarity=0.324 Sum_probs=247.7
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~ 147 (486)
++.+..|+++|+||||||++.|++||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 134 n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~-------~~~ydps~SsT~~~~~------------ 194 (453)
T 2bju_A 134 DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLT-------KHLYDSSKSRTYEKDG------------ 194 (453)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGG-------SCCBCGGGCTTCEEEE------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCC-------CCcCCCccCCceeECC------------
Confidence 346789999999999999999999999999999999885 4543 4699999999999965
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeecc--CCCCCCCCCCcceeeecCC
Q 011402 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQS--GNLDSTNEEALDGIIGFGK 225 (486)
Q Consensus 148 ~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~GIlGLg~ 225 (486)
|.|.+.|++|+ +.|.+++|+|++++.. ++ +.|||++..+ +... .....+||||||+
T Consensus 195 ----------~~~~i~YgdGs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~~~g~~f--~~~~~dGIlGLg~ 252 (453)
T 2bju_A 195 ----------TKVEMNYVSGT-VSGFFSKDLVTVGNLS--------LP-YKFIEVIDTNGFEPTY--TASTFDGILGLGW 252 (453)
T ss_dssp ----------EEEEEECSSSE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECGGGTTHH--HHSSCCEEEECSC
T ss_pred ----------cEEEEEcCCCC-eEEEEEEEEEEEeCcE--------EE-EEEEEEEEecccCccc--cccCCceeEeccC
Confidence 79999999999 8999999999998753 45 8999999876 4321 2346899999999
Q ss_pred CCC------cHHHHHhhcCCC-CcceeEeccCC-CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEe
Q 011402 226 SNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFL 293 (486)
Q Consensus 226 ~~~------s~~~~L~~~g~i-~~~fS~~L~~~-~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~ 293 (486)
+.. +++++|++||+| +++||+||++. ..+|.|+|||+|+++ +.|+|+. .+.+|.|.++ |.|+++ +
T Consensus 253 ~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~-I~Vgg~-~ 329 (453)
T 2bju_A 253 KDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD-AHVGNI-M 329 (453)
T ss_dssp GGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-EEETTE-E
T ss_pred CcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-EEECcE-E
Confidence 753 689999999999 69999999985 457999999999864 7899997 5689999999 999993 3
Q ss_pred ecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCccccc-CCCCceeecCCCccCCCceEEEEECCCcE
Q 011402 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTV-HDEYTCFQYSESVDEGFPNVTFHFENSVS 372 (486)
Q Consensus 294 ~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~p~i~f~f~gg~~ 372 (486)
. ....+++||||+++++|++++++|.+++++... ..+ .+.++|+ . ..+|+|+|+| +|.+
T Consensus 330 -~--------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~----~~g~~~~v~C~-----~-~~~P~itf~f-gg~~ 389 (453)
T 2bju_A 330 -L--------EKANCIVDSGTSAITVPTDFLNKMLQNLDVIKV----PFLPFYVTLCN-----N-SKLPTFEFTS-ENGK 389 (453)
T ss_dssp -E--------EEEEEEECTTCCSEEECHHHHHHHTTTSSCEEC----TTSSCEEEETT-----C-TTCCCEEEEC-SSCE
T ss_pred -e--------ccccEEEcCCCCeEecCHHHHHHHHHHhCCccc----CCCceEEEecC-----C-CCCCcEEEEE-CCEE
Confidence 1 245799999999999999999999988866421 112 2345673 2 5689999999 9999
Q ss_pred EEECCCcceEEcC---CeEEE-EEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCCC
Q 011402 373 LKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYNC 434 (486)
Q Consensus 373 ~~l~~~~yi~~~~---~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~~ 434 (486)
++||+++|+++.. +..|+ +|+..+. ..+.||||++|||++|+|||++++|||||+++-
T Consensus 390 ~~l~~~~yi~~~~~~g~~~C~~~~~~~~~----~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~~ 451 (453)
T 2bju_A 390 YTLEPEYYLQHIEDVGPGLCMLNIIGLDF----PVPTFILGDPFMRKYFTVFDYDNHSVGIALAKK 451 (453)
T ss_dssp EEECHHHHEEECTTTSTTEEEECEEECCC----SSCEEEECHHHHHHEEEEEETTTTEEEEEEECS
T ss_pred EEECHHHhEeecccCCCceEEEEEEeCCC----CCCCEEECHHHhhcEEEEEECCCCEEEEEEccc
Confidence 9999999999873 35897 7776541 135899999999999999999999999999763
No 29
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.2e-54 Score=428.21 Aligned_cols=296 Identities=20% Similarity=0.315 Sum_probs=243.0
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (486)
.+..|+++|+|| ||++.|+|||||+++||+|..|..|. |..++.|||++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~-----c~~~~~y~~~~Ss-~~~------------------ 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSE-----QTGHDLYTPSSSA-TKL------------------ 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHH-----HTTSCCCBCCSSC-EEC------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccc-----cCCCCCCCchhcC-Ccc------------------
Confidence 578999999999 89999999999999999999998764 2234799999998 543
Q ss_pred CCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 011402 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (486)
Q Consensus 152 c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (486)
+.|.|.+.|++|+.+.|.+++|+|+|++..+ +++.|||++..++.+. .....+||||||++..
T Consensus 66 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v--------~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 ----SGYSWDISYGDGSSASGDVYRDTVTVGGVTT--------NKQAVEAASKISSEFV--QDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp ----TTCBEEEECSSSCEEEEEEEEEEEEETTEEE--------EEEEEEEEEEECHHHH--TSTTCCEEEECSCGGGCCC
T ss_pred ----CCCEEEEEeCCCCEEEEEEEEeEEEECCEEE--------cceEEEEEEecCcccc--ccCCCceEEEeCccccccc
Confidence 2379999999999889999999999998653 4899999998765432 2246899999999653
Q ss_pred ------cHHHHHhhcCCCCcceeEeccCCCCCceEEeCCcCCC----CceEeeCCCCCCceEEEEEEEEEcCEEeecCCc
Q 011402 229 ------SMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTD 298 (486)
Q Consensus 229 ------s~~~~L~~~g~i~~~fS~~L~~~~~~G~l~~Ggvd~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~ 298 (486)
+++++|+++ +.+++||+||.+ +..|.|+||++|++ ++.|+|+.+++.+|.|.+++|.|+++.+.
T Consensus 132 ~p~~~~~~~~~l~~~-i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~---- 205 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ-LDSPLFAVQLKH-DAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS---- 205 (325)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEEEET-TEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB----
T ss_pred CcCCCCCHHHHHHHh-cCCcEEEEEecC-CCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc----
Confidence 478999987 337999999987 46899999999976 48899998667899999999999997653
Q ss_pred ccccCCCCceEEeccCceeecChhHHHHHHHHHH-hhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEECC
Q 011402 299 VFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII-SQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVYP 377 (486)
Q Consensus 299 ~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~-~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~ 377 (486)
.....++|||||+++++|++++++|.+++. +.+.. ..+.+.++|+ ..+|+|+|+| +|.+++||+
T Consensus 206 ----~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~~~---~~g~~~~~C~-------~~~P~i~f~f-gg~~~~i~~ 270 (325)
T 1ibq_A 206 ----SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQESY---EAGGYVFSCS-------TDLPDFTVVI-GDYKAVVPG 270 (325)
T ss_dssp ----SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBCCS---SSSSCEEETT-------CCCCCEEEEE-TTEEEEECH
T ss_pred ----CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceEcC---cCCeEEEEcC-------CCCCcEEEEE-CCEEEEECH
Confidence 234679999999999999999999999983 43321 1233456783 4689999999 999999999
Q ss_pred CcceEEc---CCeEEEE-EeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 378 HEYLFPF---EDLWCIG-WQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 378 ~~yi~~~---~~~~C~~-i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
++|+++. +...|++ ++... +.+.||||++|||++|+|||++++|||||+++
T Consensus 271 ~~~~~~~~~~~~~~C~~~i~~~~-----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 271 KYINYAPVSTGSSTCYGGIQSNS-----GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp HHHEEEESSTTCSEEEESEEECT-----TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHhcccccCCCCCeEEEEEEcCC-----CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 9999875 2368974 65542 24679999999999999999999999999864
No 30
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2e-54 Score=428.03 Aligned_cols=295 Identities=20% Similarity=0.298 Sum_probs=241.8
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (486)
.+..|+++|+|| ||++.|+|||||+++||+|..|..|. |..++.|||++|+ ++..
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~-----c~~~~~y~~~~Ss-~~~~----------------- 67 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSE-----RSGHDYYTPGSSA-QKID----------------- 67 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH-----HTTCCCBCCCTTC-EEEE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccc-----ccCCCCCCccccC-CccC-----------------
Confidence 567999999999 89999999999999999999998663 2234699999999 5542
Q ss_pred CCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 011402 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (486)
Q Consensus 152 c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (486)
+|.|.+.|++|+.+.|.+++|+|+|++..+ +++.|||++..++.+. .....+||||||++..
T Consensus 68 -----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v--------~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 68 -----GATWSISYGDGSSASGDVYKDKVTVGGVSY--------DSQAVESAEKVSSEFT--QDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTEEE--------EEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEcCCCCeEEEEEEEEEEEECCEEE--------CceEEEEEEecccccc--ccCCCceEEecCccccccc
Confidence 379999999999889999999999998653 4899999998765432 1245799999999643
Q ss_pred ------cHHHHHhhcCCCCcceeEeccCCCCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEeecCCc
Q 011402 229 ------SMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFLNLPTD 298 (486)
Q Consensus 229 ------s~~~~L~~~g~i~~~fS~~L~~~~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~ 298 (486)
+++++|++| +.+++||+||.+ +..|.|+||++|+++ +.|+|+.+++.+|.|.+++|.|++ .+.
T Consensus 133 ~p~~~~~~~~~l~~~-i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~---- 205 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS-LSEPIFAVALKH-NAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS---- 205 (323)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEECCT-TSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE----
T ss_pred CCCCCCCHHHHHHHh-ccCcEEEEEccC-CCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc----
Confidence 578999987 337999999987 468999999999876 789999866789999999999999 442
Q ss_pred ccccCCCCceEEeccCceeecChhHHHHHHHHHH-hhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEECC
Q 011402 299 VFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII-SQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVYP 377 (486)
Q Consensus 299 ~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~-~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~ 377 (486)
.....+++||||+++++|++++++|.+++. +.+.. ..+.+.++|+ +.+|+|+|+| +|.+++||+
T Consensus 206 ----~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~~~---~~g~~~~~C~-------~~~P~i~f~f-gg~~~~i~~ 270 (323)
T 1izd_A 206 ----SDSITGIADTGTTLLLLDDSIVDAYYEQVNGASYDS---SQGGYVFPSS-------ASLPDFSVTI-GDYTATVPG 270 (323)
T ss_dssp ----CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEEET---TTTEEEEETT-------CCCCCEEEEE-TTEEEEECH
T ss_pred ----CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEEcC---cCCEEEEECC-------CCCceEEEEE-CCEEEecCH
Confidence 234679999999999999999999998884 33211 1122345673 4689999999 999999999
Q ss_pred CcceEEc-CCeEEEE-EeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 378 HEYLFPF-EDLWCIG-WQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 378 ~~yi~~~-~~~~C~~-i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
++|+++. ++..|++ |...+ +.+.||||++|||++|+|||++++|||||+++
T Consensus 271 ~~~~~~~~~~~~C~~~i~~~~-----~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 271 EYISFADVGNGQTFGGIQSNS-----GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp HHHEEEECSTTEEEESEEECT-----TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHeEEecCCCCeEEEEEEcCC-----CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 9999876 5568975 76543 24679999999999999999999999999863
No 31
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.4e-53 Score=431.48 Aligned_cols=328 Identities=17% Similarity=0.309 Sum_probs=246.1
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~ 149 (486)
+..+.+|+++|+|||| |+|||||+++||+|..|. +++.++|.++.|...+....
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~---------------------~~~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ---------------------PPAEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC---------------------CCCCCBTTSHHHHHHHSSCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC---------------------CCCccCCCCchhccccCCCC
Confidence 4568899999999998 999999999999987541 13344455555543222111
Q ss_pred CCCC--------CCCCC-eeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcc----eEEeeeeeccCCCCCCCCCC
Q 011402 150 TDCT--------ANTSC-PYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGS----LIFGCGARQSGNLDSTNEEA 216 (486)
Q Consensus 150 ~~c~--------~~~~~-~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~----~~fg~~~~~~~~~~~~~~~~ 216 (486)
+.|. .++.| .|.+.|+||+.+.|.+++|+|+|++..... .+++ +.|||+..+.... ....
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~----~v~~~~~~~~Fg~~~~~~~~~---~~~~ 136 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSK----PVSKVNVGVLAACAPSKLLAS---LPRG 136 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSS----EEEEEEEEEEEEECCGGGGTT---SCTT
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCc----cccceeeeeEeecCcccccCC---CCCC
Confidence 2332 12346 599999999978999999999999743211 1223 3679998763211 1246
Q ss_pred cceeeecCCCCCcHHHHHhhcCCCCcceeEeccCCCCCceEEeCCcCC------CCceEeeCCCC--CCceEEEEEEEEE
Q 011402 217 LDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQ------PEVNKTPLVPN--QPHYSINMTAVQV 288 (486)
Q Consensus 217 ~~GIlGLg~~~~s~~~~L~~~g~i~~~fS~~L~~~~~~G~l~~Ggvd~------~~~~~~p~~~~--~~~~~v~l~~i~v 288 (486)
.+||||||++..+++.||+++++++++||+||.+. .+|.|+||++|. .++.|+|++.+ ..+|+|.+++|+|
T Consensus 137 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~v 215 (381)
T 1t6e_X 137 STGVAGLANSGLALPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVV 215 (381)
T ss_dssp EEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEE
T ss_pred CceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEE
Confidence 89999999999999999999997789999999874 789999999875 35899999864 2578899999999
Q ss_pred cCEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCC-------CCcc--cccCCCCceeecCCCc---
Q 011402 289 GLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP-------DLKV--HTVHDEYTCFQYSESV--- 356 (486)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~-------~~~~--~~~~~~~~C~~~~~~~--- 356 (486)
+++.+.++...|. ...+||||||++++||+++|++|.+++.+... .... .......+|+..++..
T Consensus 216 g~~~~~~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~ 292 (381)
T 1t6e_X 216 GDTRVPVPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNL 292 (381)
T ss_dssp TTEECCCCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEET
T ss_pred cCEEecCCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccc
Confidence 9999877665553 46799999999999999999999999977542 1111 1122346898765422
Q ss_pred -cCCCceEEEEECCCcEEEECCCcceEEc-CCeEEEEEeccCccc--cCCCCeeeechhhhceeEEEEECCCCEEEEEeC
Q 011402 357 -DEGFPNVTFHFENSVSLKVYPHEYLFPF-EDLWCIGWQNSGMQS--RDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEY 432 (486)
Q Consensus 357 -~~~~p~i~f~f~gg~~~~l~~~~yi~~~-~~~~C~~i~~~~~~~--~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~ 432 (486)
...+|+|+|+|.||++++||+++|+++. ++..|++++...... .+..+.||||+.|||++|+|||++++|||||++
T Consensus 293 ~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~ 372 (381)
T 1t6e_X 293 GGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRL 372 (381)
T ss_dssp TEECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred cCCcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecc
Confidence 1368999999955699999999999986 567999887754210 011257999999999999999999999999997
Q ss_pred CC
Q 011402 433 NC 434 (486)
Q Consensus 433 ~~ 434 (486)
..
T Consensus 373 ~~ 374 (381)
T 1t6e_X 373 PH 374 (381)
T ss_dssp CT
T ss_pred cC
Confidence 65
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.4e-54 Score=427.59 Aligned_cols=293 Identities=21% Similarity=0.362 Sum_probs=240.3
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCCC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (486)
.+..|+++|+|| ||++.|+|||||+++||+|..|..|. |..++.|||++|+ ++..
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~-----c~~~~~y~~~~Ss-~~~~----------------- 67 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQ-----QSGHSVYNPSATG-KELS----------------- 67 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH-----HTTSCCBCHHHHC-EEEE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchh-----ccCCCCCCcccCC-cccC-----------------
Confidence 567999999999 89999999999999999999998764 2335799999998 6542
Q ss_pred CCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 011402 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (486)
Q Consensus 152 c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (486)
.|.|.+.|++|+.+.|.+++|+|+|++..+ +++.||+++..++.+. .....+||||||++..
T Consensus 68 -----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v--------~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 68 -----GYTWSISYGDGSSASGNVFTDSVTVGGVTA--------HGQAVQAAQQISAQFQ--QDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTEEE--------EEEEEEEEEEECHHHH--TCTTCSEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCeEEEEEEEEEEEECCEEE--------CcEEEEEEEecCcccc--cCCCCceEEEeCccccccc
Confidence 379999999999889999999999998653 4899999998765432 2246799999999642
Q ss_pred ------cHHHHHhhcCCC-CcceeEeccCCCCCceEEeCCcCCC----CceEeeCCCCCCceEEEEEEEEEcCEEeecCC
Q 011402 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (486)
Q Consensus 229 ------s~~~~L~~~g~i-~~~fS~~L~~~~~~G~l~~Ggvd~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 297 (486)
+++++|+++ + +++||+||.+ +..|.|+||++|++ ++.|+|+.+++.+|.|.+++|.|++ ..
T Consensus 133 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~---- 204 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS--LAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QS---- 204 (323)
T ss_dssp BSSCCCCHHHHHGGG--BSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EE----
T ss_pred ccCCCCCHHHHHHHh--cCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-cc----
Confidence 588999987 6 6999999987 46899999999975 4899999866789999999999998 21
Q ss_pred cccccCCCCceEEeccCceeecChhHHHHHHHHHH-hhCCCCcccccCCCCceeecCCCccCCCceEEEEECCCcEEEEC
Q 011402 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII-SQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (486)
Q Consensus 298 ~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~-~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~ 376 (486)
.....+||||||+++++|++++++|.+++. +.+.. ..+.+.++|+ ..+|+|+|+| +|.+++||
T Consensus 205 -----~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~~---~~g~~~~~C~-------~~~P~i~f~f-gg~~~~l~ 268 (323)
T 1bxo_A 205 -----GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDS---NAGGYVFDCS-------TNLPDFSVSI-SGYTATVP 268 (323)
T ss_dssp -----EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEEET---TTTEEEECTT-------CCCCCEEEEE-TTEEEEEC
T ss_pred -----CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceEcC---cCCEEEEECC-------CCCceEEEEE-CCEEEEEC
Confidence 124569999999999999999999999883 33211 1122345673 4689999999 99999999
Q ss_pred CCcceEEc--CCeEEEE-EeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCC
Q 011402 377 PHEYLFPF--EDLWCIG-WQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 377 ~~~yi~~~--~~~~C~~-i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~ 433 (486)
+++|+++. ++..|++ |.... +.+.||||++|||++|+|||++++|||||++.
T Consensus 269 ~~~~~~~~~~~~~~C~~~i~~~~-----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 269 GSLINYGPSGDGSTCLGGIQSNS-----GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp HHHHEEEECSSSSCEEESEEECT-----TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHeEEeccCCCCeEEEEEECCC-----CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 99999876 3368974 66543 24679999999999999999999999999863
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=5.5e-53 Score=421.02 Aligned_cols=289 Identities=20% Similarity=0.314 Sum_probs=236.3
Q ss_pred cccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCCCCCCCC
Q 011402 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDC 152 (486)
Q Consensus 73 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~c 152 (486)
+..|+++|+||||||++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~~~------------------- 56 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSATS------------------- 56 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEEEE-------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccccC-------------------
Confidence 469999999999999999999999999999864 3799998886554
Q ss_pred CCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC----
Q 011402 153 TANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS---- 228 (486)
Q Consensus 153 ~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 228 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+ + ...+||||||++..
T Consensus 57 -----~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~v--------~~~~fg~~~~~~~-~-----~~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 57 -----DKVSVTYGSGS-FSGTEYTDTVTLGSLTI--------PKQSIGVASRDSG-F-----DGVDGILGVGPVDLTVGT 116 (340)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEETTEEE--------EEEEEEEEEEEES-C-----TTCSEEEECSCGGGGTTS
T ss_pred -----ceEEEEECCcE-EEEEEEEEEEEECCEEE--------cceEEEEEEccCC-C-----cCCCcEEECCcccccccc
Confidence 79999999998 89999999999998543 4899999998765 3 14899999998653
Q ss_pred ----------cHHHHHhhcCCC-CcceeEeccCC----CCCceEEeCCcCCC----CceEeeCCCC---CCceEEEEEEE
Q 011402 229 ----------SMISQLASSGGV-RKMFAHCLDGI----NGGGIFAIGHVVQP----EVNKTPLVPN---QPHYSINMTAV 286 (486)
Q Consensus 229 ----------s~~~~L~~~g~i-~~~fS~~L~~~----~~~G~l~~Ggvd~~----~~~~~p~~~~---~~~~~v~l~~i 286 (486)
+++++|++||+| +++||+||.+. ...|.|+||++|++ ++.|+|+..+ ..+|.|. ++|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 579999999999 69999999863 34799999999975 4889999864 5789999 999
Q ss_pred EEcC-EEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCcccccCCCCceeecCCCccCCCceEEE
Q 011402 287 QVGL-DFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTF 365 (486)
Q Consensus 287 ~v~~-~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f 365 (486)
.|++ +.+.. ...++|||||++++||++++++|.+++++.+.. ..+.+.++|. ....+|+|+|
T Consensus 196 ~v~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~---~~g~~~~~C~-----~~~~~p~i~f 258 (340)
T 1wkr_A 196 RYGSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAVADN---NTGLLRLTTA-----QYANLQSLFF 258 (340)
T ss_dssp EETTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEECT---TTSSEEECHH-----HHHTCCCEEE
T ss_pred EECCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC---CCCeEEeecc-----ccccCCcEEE
Confidence 9998 77631 246999999999999999999999988766432 1223345673 2356899999
Q ss_pred EECCCcEEEECCCcceEEcC--------CeEE-EEEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEeCCCC
Q 011402 366 HFENSVSLKVYPHEYLFPFE--------DLWC-IGWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTEYNCE 435 (486)
Q Consensus 366 ~f~gg~~~~l~~~~yi~~~~--------~~~C-~~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~~~~~ 435 (486)
+| +|.+++|+|++|+++.. ...| +++....... .....||||++|||++|+|||++++|||||+++|+
T Consensus 259 ~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~-~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 335 (340)
T 1wkr_A 259 TI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDS-GEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFT 335 (340)
T ss_dssp EE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCT-TSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTT
T ss_pred EE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCC-CCCcceEeChHhhhheEEEEeCCCCeEEEEecCCC
Confidence 99 99999999999998641 2356 4665533211 11246999999999999999999999999999996
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=8.2e-43 Score=329.67 Aligned_cols=216 Identities=28% Similarity=0.410 Sum_probs=185.2
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~---~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~ 146 (486)
++.+..|+++|+||||||++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 9 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~~----------- 70 (239)
T 1b5f_A 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA-------HSMYESSDSSTYKENG----------- 70 (239)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT-------SCCBCGGGCTTCEEEE-----------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC-------CCCCCCccCCCeeeCC-----------
Confidence 456789999999999999999999999999999999886 3543 4689999999999865
Q ss_pred CCCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEecccCCccccccCcceEEeeeeeccCC-CCCCCCCCcceeeecCC
Q 011402 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGK 225 (486)
Q Consensus 147 ~~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~ 225 (486)
|.|.+.|++|+ +.|.+++|+|+|++..+ +++.||++....+. | .....+||||||+
T Consensus 71 -----------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~v--------~~~~fg~~~~~~~~~f---~~~~~~GilGLg~ 127 (239)
T 1b5f_A 71 -----------TFGAIIYGTGS-ITGFFSQDSVTIGDLVV--------KEQDFIEATDEADNVF---LHRLFDGILGLSF 127 (239)
T ss_dssp -----------EEEEEECSSCE-EEEEEEEEEEEETTEEE--------EEEEEEEEEEECHHHH---TTCSCCEEEECSC
T ss_pred -----------cEEEEEECCCc-EEEEEEEEEEEECCcEE--------ccEEEEEEEeccCccc---cccCcceEEecCc
Confidence 68999999998 79999999999997653 38999999876542 2 2346799999999
Q ss_pred CCCc--HHHHHhhcCCC-CcceeEeccCC---CCCceEEeCCcCCCC----ceEeeCCCCCCceEEEEEEEEEcCEEeec
Q 011402 226 SNSS--MISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (486)
Q Consensus 226 ~~~s--~~~~L~~~g~i-~~~fS~~L~~~---~~~G~l~~Ggvd~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~ 295 (486)
+..+ ++.+|++||+| +++||+||.+. ...|.|+||++|+++ +.|+|+. .+.+|.|.+++|.|+++.+.+
T Consensus 128 ~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (239)
T 1b5f_A 128 QTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGF 206 (239)
T ss_dssp CSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCT
T ss_pred cccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEecc
Confidence 8865 77899999999 69999999874 357999999999875 7899997 467999999999999998754
Q ss_pred CCcccccCCCCceEEeccCceeecChhHHHHHHHHHHh
Q 011402 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIIS 333 (486)
Q Consensus 296 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~ 333 (486)
+. ....++|||||++++||++++++|.+++++
T Consensus 207 ~~------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 207 CA------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TT------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred cC------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 32 246799999999999999999999999865
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=7.7e-38 Score=296.46 Aligned_cols=219 Identities=18% Similarity=0.315 Sum_probs=178.0
Q ss_pred CcceEEeeeeeccCCCCCCCCCCcceeeecCCCCC------cHHHHHhhcCCC-CcceeEeccCCC-C--CceEEeCCcC
Q 011402 194 NGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN-G--GGIFAIGHVV 263 (486)
Q Consensus 194 ~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~~L~~~g~i-~~~fS~~L~~~~-~--~G~l~~Ggvd 263 (486)
++++.|||++.+++.+. .....+||||||++.. +++++|++||+| +++||+||++.. . +|.|+||++|
T Consensus 5 v~~~~Fg~~~~~~~~~f--~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 5 VERQVFGEATKQPGITF--IAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEECCSSTT--TSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred ECCeEEEEEEEccCCcc--ccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 45899999998866432 3467899999999753 589999999999 699999999852 2 7999999999
Q ss_pred CCC----ceEeeCCCCCCceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCCCc
Q 011402 264 QPE----VNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLK 339 (486)
Q Consensus 264 ~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~~~ 339 (486)
+++ +.|+|+. ++.+|.|.+++|+|+++.+. ......+++||||+++++|++++++|.+++++...
T Consensus 83 ~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~-------~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--- 151 (241)
T 1lya_B 83 SKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTL-------CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL--- 151 (241)
T ss_dssp GGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEE-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE---
T ss_pred HHHcCCceEEEECc-cccEEEEEEeEEEECCeeEe-------ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec---
Confidence 875 7899998 57899999999999997642 12356799999999999999999999999976542
Q ss_pred ccccCCCCceeecCCCccCCCceEEEEECCCcEEEECCCcceEEcC---CeEEE-EEeccCccccCCCCeeeechhhhce
Q 011402 340 VHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDLVLSN 415 (486)
Q Consensus 340 ~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~---~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~ 415 (486)
..+.+.++|+ ..+.+|+|+|+| +|.+++||+++|+++.. +..|+ +|...+.... ..+.||||++|||+
T Consensus 152 -~~g~~~~~C~-----~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~-~~~~~ilG~~fl~~ 223 (241)
T 1lya_B 152 -IQGEYMIPCE-----KVSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPP-SGPLWILGDVFIGR 223 (241)
T ss_dssp -ETTEEEEEGG-----GGGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTT-TCCCEEECHHHHTT
T ss_pred -cCCcEEEECC-----CCccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCC-CCCeEEechHHhcc
Confidence 1223445774 335689999999 99999999999999863 56897 5876543211 24679999999999
Q ss_pred eEEEEECCCCEEEEEeCC
Q 011402 416 KLVLYDLENQVIGWTEYN 433 (486)
Q Consensus 416 ~y~vfD~~~~rIg~a~~~ 433 (486)
+|+|||++++|||||+++
T Consensus 224 ~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 224 YYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCEEEEEEcC
Confidence 999999999999999864
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.87 E-value=1.2e-22 Score=162.44 Aligned_cols=84 Identities=39% Similarity=0.584 Sum_probs=75.8
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC----CCCCcCCCCccCCccCCCCCCccceecCCCcccCCCC
Q 011402 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (486)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~c~----~C~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~ 145 (486)
++.+..|+++|+||||||+|.|+|||||+++||+|..|. .|.. ++.|||++|+|++...
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~-------~~~y~p~~SsT~~~~~---------- 71 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI-------HHKYNSDKSSTYVKNG---------- 71 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT-------SCCBCGGGCTTCEEEE----------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC-------CCCCCchhCCCceeCC----------
Confidence 456789999999999999999999999999999998886 4544 4699999999999965
Q ss_pred CCCCCCCCCCCCCeeeEEeCCCCeEeEEEEEEEEEEec
Q 011402 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK 183 (486)
Q Consensus 146 ~~~~~~c~~~~~~~~~i~Y~dg~~~~G~~~~D~v~ig~ 183 (486)
|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 72 ------------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ------------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ------------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ------------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 69999999999 89999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.70 E-value=1.6e-17 Score=130.40 Aligned_cols=81 Identities=22% Similarity=0.471 Sum_probs=66.0
Q ss_pred CCCceeecCCCccCCCceEEEEECCCcEEEECCCcceEEc---CCeEEE-EEeccCccccCCCCeeeechhhhceeEEEE
Q 011402 345 DEYTCFQYSESVDEGFPNVTFHFENSVSLKVYPHEYLFPF---EDLWCI-GWQNSGMQSRDRKNMTLLGDLVLSNKLVLY 420 (486)
Q Consensus 345 ~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~---~~~~C~-~i~~~~~~~~~~~~~~iLG~~fl~~~y~vf 420 (486)
|.++| +....+|+|+|+| +|++++|+|++|+.+. ++..|+ +++..+.+ ...+.||||++|||++|+||
T Consensus 3 y~v~C-----~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~--~~~~~~ILGd~Fl~~~y~vf 74 (87)
T 1b5f_B 3 LQVDC-----NTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT--LLGPLWILGDVFMRPYHTVF 74 (87)
T ss_dssp CEECG-----GGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCB--SSSBEEEECHHHHTTEEEEE
T ss_pred EEEEC-----CCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC--CCCCeEEechHHhccEEEEE
Confidence 45677 3335689999999 9999999999999985 236897 67765432 22468999999999999999
Q ss_pred ECCCCEEEEEeCC
Q 011402 421 DLENQVIGWTEYN 433 (486)
Q Consensus 421 D~~~~rIg~a~~~ 433 (486)
|++++|||||+++
T Consensus 75 D~~~~riGfA~~~ 87 (87)
T 1b5f_B 75 DYGNLLVGFAEAA 87 (87)
T ss_dssp ETTTTEEEEEEEC
T ss_pred ECCCCEEEEEEcC
Confidence 9999999999864
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=95.39 E-value=0.017 Score=48.95 Aligned_cols=109 Identities=17% Similarity=0.113 Sum_probs=63.8
Q ss_pred CceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHH--HhhCCCCcccccCCCCceeecCC
Q 011402 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKI--ISQQPDLKVHTVHDEYTCFQYSE 354 (486)
Q Consensus 277 ~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i--~~~~~~~~~~~~~~~~~C~~~~~ 354 (486)
.+++|+ +.|||+.+. +++|||++.+.++.+.++++--.. ...+.. ...+.....+.
T Consensus 23 ~~l~v~---~~Ing~~v~-------------~LVDTGAs~s~Is~~~A~rlGL~~~~~~~~~~--~a~g~G~~~~~---- 80 (148)
T 3s8i_A 23 TMLYIN---CKVNGHPLK-------------AFVDSGAQMTIMSQACAERCNIMRLVDRRWAG--VAKGVGTQRII---- 80 (148)
T ss_dssp CCCEEE---EEETTEEEE-------------EEECTTCSSCEEEHHHHHHTTCGGGEEGGGCE--ECCC---CEEE----
T ss_pred CEEEEE---EEECCEEEE-------------EEEeCCCCcEeeCHHHHHHcCCccccCcceeE--EEEcCCccEEE----
Confidence 345554 447888775 999999999999999777662110 000000 00000111110
Q ss_pred CccCCCceEEEEECCCcEEEECCCcceEEcCCeEE-EEEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEEe
Q 011402 355 SVDEGFPNVTFHFENSVSLKVYPHEYLFPFEDLWC-IGWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWTE 431 (486)
Q Consensus 355 ~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~C-~~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a~ 431 (486)
...+...+.+ |+..+. | +.+.+.. ....|||..||+++-.+.|++++++-|..
T Consensus 81 ---g~v~~~~I~I-g~~~~~--------------~~~~Vle~~------~~d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 81 ---GRVHLAQIQI-EGDFLQ--------------CSFSILEDQ------PMDMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp ---EEEEEEEEEE-TTEEEE--------------EEEEEETTC------SSSEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred ---EEEEEEEEEE-CCEEEE--------------EEEEEeCCC------CcCeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 1123455666 554321 2 2233222 23479999999999999999999999965
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=95.29 E-value=0.029 Score=47.52 Aligned_cols=108 Identities=11% Similarity=0.082 Sum_probs=60.8
Q ss_pred CceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChhHHHHHHHHHHhhCCC-Cc-ccccCCCCceeecCC
Q 011402 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPD-LK-VHTVHDEYTCFQYSE 354 (486)
Q Consensus 277 ~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~i~~~~~~-~~-~~~~~~~~~C~~~~~ 354 (486)
.++.|. +.|||+.+. +++|||++.+.++.+..+++-- ...... .. ...+.....+
T Consensus 25 ~~~~v~---v~InG~~~~-------------~LvDTGAs~s~is~~~a~~lgl--~~~~~~~~~~~a~g~g~~~~----- 81 (148)
T 2i1a_A 25 PMLYIN---IEINNYPVK-------------AFVDTGAQTTIMSTRLAKKTGL--SRMIDKRFIGEARGVGTGKI----- 81 (148)
T ss_dssp CCCEEE---EEETTEEEE-------------EEECTTCSSCEEEHHHHHHHTG--GGGCBCCCC----------------
T ss_pred ceEEEE---EEECCEEEE-------------EEEECCCCccccCHHHHHHcCC--CccCCcceEEEEecCCCccc-----
Confidence 345544 678998764 9999999999999887655421 111110 00 0000010001
Q ss_pred CccCCCceEEEEECCCcEEEECCCcceEEcCCeEEEEEeccCccccCCCCeeeechhhhceeEEEEECCCCEEEEE
Q 011402 355 SVDEGFPNVTFHFENSVSLKVYPHEYLFPFEDLWCIGWQNSGMQSRDRKNMTLLGDLVLSNKLVLYDLENQVIGWT 430 (486)
Q Consensus 355 ~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~C~~i~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIg~a 430 (486)
........+.+ |+..+.++ +.+.+. ....|||..||+++-++.|+.++++-|.
T Consensus 82 --~~~~~~~~i~i-g~~~~~~~-------------~~vl~~-------~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 82 --IGRIHQAQVKI-ETQYIPCS-------------FTVLDT-------DIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp --CEEEEEEEEEE-TTEEEEEE-------------EEEECS-------SCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred --ccEEEEEEEEE-CCEEecee-------------EEEecC-------CCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 01112335666 66543211 112221 1237999999999999999999999995
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.41 E-value=0.12 Score=43.64 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=27.0
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 011402 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (486)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~ 104 (486)
..+.+++++.|+ +++++++||||++.+-+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 356799999998 6899999999999988864
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=86.68 E-value=0.76 Score=35.64 Aligned_cols=28 Identities=25% Similarity=0.266 Sum_probs=24.4
Q ss_pred EEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 011402 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (486)
Q Consensus 77 ~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~ 106 (486)
++.+.|| +|.+++++|||.+++-+...+
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 5689999 699999999999999997543
No 42
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=84.88 E-value=0.85 Score=35.76 Aligned_cols=27 Identities=22% Similarity=0.179 Sum_probs=23.9
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 011402 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (486)
Q Consensus 76 Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~ 104 (486)
-++.+.|| +|.+++++|||.+++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 46789999 6999999999999999973
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=84.03 E-value=1.2 Score=34.46 Aligned_cols=28 Identities=29% Similarity=0.191 Sum_probs=24.2
Q ss_pred EEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 011402 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (486)
Q Consensus 77 ~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~ 106 (486)
++++.|| +|.++.++|||.+++-+...+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 5679999 799999999999999996543
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=83.42 E-value=0.98 Score=35.71 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=25.8
Q ss_pred EEEEEeC---CCCceEEEEEEcCCCeeeEeCCCC
Q 011402 77 YAKIGIG---TPPKDYYVQVDTGSDIMWVNCIQC 107 (486)
Q Consensus 77 ~~~i~iG---tP~q~~~v~vDTGSs~~Wv~~~~c 107 (486)
.++|.|| +|+|.+..++|||.+++.+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4566676 789999999999999999987553
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=75.94 E-value=2.3 Score=33.90 Aligned_cols=26 Identities=27% Similarity=0.193 Sum_probs=22.8
Q ss_pred EEEEEeCCCCceEEEEEEcCCCeeeEeCC
Q 011402 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (486)
Q Consensus 77 ~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~ 105 (486)
++ +.|| +|.++.++|||.+++-+...
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 44 9999 79999999999999999753
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=73.65 E-value=3.3 Score=32.80 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=24.6
Q ss_pred EEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 011402 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (486)
Q Consensus 77 ~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~ 106 (486)
.+.+.|| +|.++.++|||.+++-+...+
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 5679999 799999999999999998654
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=73.29 E-value=2.8 Score=35.14 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=27.2
Q ss_pred cccEEEEEEeCCCCceEEEEEEcCCCeeeEeCC
Q 011402 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (486)
Q Consensus 73 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~ 105 (486)
...|++++.|+ +++++++||||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 45799999998 69999999999999998753
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=66.00 E-value=6.7 Score=32.02 Aligned_cols=31 Identities=16% Similarity=0.067 Sum_probs=26.0
Q ss_pred ccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 011402 74 GLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (486)
Q Consensus 74 ~~Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~~ 106 (486)
..-++.+.|+ +|.+++++|||.+++.+....
T Consensus 21 ~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 21 PEPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CSSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CCCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 3556789999 699999999999999997543
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=58.52 E-value=9.1 Score=30.80 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=19.4
Q ss_pred eCCCCceEEEEEEcCCCeeeEeCCC
Q 011402 82 IGTPPKDYYVQVDTGSDIMWVNCIQ 106 (486)
Q Consensus 82 iGtP~q~~~v~vDTGSs~~Wv~~~~ 106 (486)
|| +|.++.++|||-+++.+...+
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 55 588899999999999998644
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=56.64 E-value=8.9 Score=33.74 Aligned_cols=27 Identities=26% Similarity=0.196 Sum_probs=24.0
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 011402 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (486)
Q Consensus 76 Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~ 104 (486)
-.+.+.|| +|.++.++|||.+++-+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 46789999 7999999999999999964
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=47.04 E-value=17 Score=27.62 Aligned_cols=15 Identities=20% Similarity=0.709 Sum_probs=14.0
Q ss_pred eEEeccCceeecChh
Q 011402 308 TIIDSGTTLAYLPEM 322 (486)
Q Consensus 308 ~iiDSGtt~~~lp~~ 322 (486)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 30 VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCCceEEeEc
Confidence 999999999999975
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=36.86 E-value=36 Score=29.86 Aligned_cols=28 Identities=25% Similarity=0.222 Sum_probs=24.2
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeCC
Q 011402 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (486)
Q Consensus 76 Y~~~i~iGtP~q~~~v~vDTGSs~~Wv~~~ 105 (486)
=.+++.|| +|.++.++|||.+++-+...
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 36789999 69999999999999999643
No 53
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=27.93 E-value=53 Score=29.36 Aligned_cols=32 Identities=13% Similarity=0.085 Sum_probs=23.9
Q ss_pred ccEEEE---EEeCC-----CCceEEEEEEcCCCeeeEeCC
Q 011402 74 GLYYAK---IGIGT-----PPKDYYVQVDTGSDIMWVNCI 105 (486)
Q Consensus 74 ~~Y~~~---i~iGt-----P~q~~~v~vDTGSs~~Wv~~~ 105 (486)
++|.++ |.||. +.....++||||++.+++|..
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 467665 67875 234578999999999999853
No 54
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=27.17 E-value=53 Score=26.61 Aligned_cols=25 Identities=20% Similarity=0.371 Sum_probs=21.1
Q ss_pred EEEEcCEEeecCCcccccCCCCceEEeccCceeecChh
Q 011402 285 AVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (486)
Q Consensus 285 ~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~ 322 (486)
.+.|+|+.+. +++|||...+.++..
T Consensus 26 ~i~I~G~~~~-------------~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 26 TLKVGGQPVT-------------FLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEETTEEEE-------------EEECTTCSSCEECSC
T ss_pred EEEECCEEEE-------------EEEeCCCCeEEEccc
Confidence 4788888764 999999999999874
No 55
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=26.37 E-value=48 Score=31.33 Aligned_cols=39 Identities=26% Similarity=0.427 Sum_probs=25.5
Q ss_pred eeCCCCCCceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChh
Q 011402 270 TPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (486)
Q Consensus 270 ~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~ 322 (486)
+|+......|.++ |.||. |++.| .+++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGt-----P~Q~~------~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 5 LSLINEGPSYASK---VSVGS-----NKQQQ------TVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEECSSSEEEE---EEETT-----TTEEE------EEEEETTCCCEEEEEE
T ss_pred eEEEcCCCEEEEE---EEEcC-----CCcEE------EEEEeCCCCceEEecC
Confidence 4555445567654 56662 22222 3999999999999854
No 56
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=26.29 E-value=48 Score=31.30 Aligned_cols=39 Identities=23% Similarity=0.466 Sum_probs=24.9
Q ss_pred eeCCCCCCceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChh
Q 011402 270 TPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (486)
Q Consensus 270 ~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~ 322 (486)
+|+......|.++ |.||. |++.| .+++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGt-----P~q~~------~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINEGPSYAAD---IVVGS-----NQQKQ------TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEECSSSEEEE---EEETT-----TTEEE------EEEEETTCCCEEEEEE
T ss_pred EEEecCCcEEEEE---EEEcC-----CCcEE------EEEEcCCCCCEEEecC
Confidence 4554444556654 66662 22222 3999999999999854
No 57
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=25.84 E-value=52 Score=31.10 Aligned_cols=39 Identities=23% Similarity=0.499 Sum_probs=24.6
Q ss_pred eeCCCCCCceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChh
Q 011402 270 TPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (486)
Q Consensus 270 ~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~ 322 (486)
+|+.+....|.+ .|.||. |++.| .++||||++.+++|..
T Consensus 5 ~~l~n~~~~Y~~---~i~iGT-----P~q~~------~v~~DTGSs~lWv~~~ 43 (340)
T 1wkr_A 5 VPATNQLVDYVV---NVGVGS-----PATTY------SLLVDTGSSNTWLGAD 43 (340)
T ss_dssp EEEEECSSCEEE---EEEETT-----TTEEE------EEEEETTCCCCEECSS
T ss_pred EeeeccCcEEEE---EEEECC-----CCcEE------EEEEeCCChhheecCC
Confidence 455433445654 466762 22222 3999999999999863
No 58
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=25.18 E-value=46 Score=25.51 Aligned_cols=27 Identities=15% Similarity=0.439 Sum_probs=21.9
Q ss_pred EEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecCh
Q 011402 282 NMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (486)
Q Consensus 282 ~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~ 321 (486)
.+-.+.|+|+... +++|||.-.+.+.+
T Consensus 9 P~vtvkI~Gq~~e-------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 9 PLVTIKIGGQLKE-------------ALLDTGADDTIIEE 35 (99)
T ss_dssp CEEEEEETTEEEE-------------EEECTTCSSEEESC
T ss_pred CEEEEEECCEEEE-------------EEeccCCCcEEEec
Confidence 4456888998764 99999999888875
No 59
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=24.10 E-value=55 Score=30.95 Aligned_cols=39 Identities=21% Similarity=0.476 Sum_probs=24.5
Q ss_pred eeCCCCCCceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChh
Q 011402 270 TPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (486)
Q Consensus 270 ~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~ 322 (486)
+|+......|.++ |.||. |++.| .++||||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGt-----P~q~~------~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 5 VTLHNEAITYTAD---ITVGS-----DNQKL------NVIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEECSSCEEEE---EEETT-----TTEEE------EEEEETTCCCEEEEEE
T ss_pred EEEecCCeEEEEE---EEECC-----CCcEE------EEEEeCCCCCeEEecC
Confidence 3444344456653 66662 22222 3999999999999854
No 60
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=23.74 E-value=61 Score=30.51 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=25.6
Q ss_pred cccEEEE---EEeCC---CCceEEEEEEcCCCeeeEeCC
Q 011402 73 VGLYYAK---IGIGT---PPKDYYVQVDTGSDIMWVNCI 105 (486)
Q Consensus 73 ~~~Y~~~---i~iGt---P~q~~~v~vDTGSs~~Wv~~~ 105 (486)
.++|.++ |.||. +.+...++||||++.+++|..
T Consensus 192 ~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 192 QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 4567665 67876 346789999999999999975
No 61
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=22.90 E-value=51 Score=25.25 Aligned_cols=29 Identities=7% Similarity=0.194 Sum_probs=22.2
Q ss_pred eEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecC
Q 011402 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLP 320 (486)
Q Consensus 279 ~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp 320 (486)
|.=.+..+.|+|+.+. +++|||.--+.+.
T Consensus 6 ~~RP~vti~I~Gq~~e-------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 6 WKRPVVTAYIEGQPVE-------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEES
T ss_pred ccCCeEEEEECCEEEE-------------EEEecCCCceEEc
Confidence 4434556889999775 9999999888774
No 62
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=22.85 E-value=49 Score=25.56 Aligned_cols=29 Identities=28% Similarity=0.383 Sum_probs=23.3
Q ss_pred EEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChhHH
Q 011402 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (486)
Q Consensus 283 l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~ 324 (486)
+-.+.|+|+... +++|||.--+.+.....
T Consensus 10 ~v~v~I~Gq~~e-------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 10 TTIVLINDTPLN-------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp EEEEEETTEEEE-------------EEECTTCSSCEEEHHHH
T ss_pred EEEEEECCEEEE-------------EEeccCCCcEEEccccC
Confidence 445888998664 99999999999987644
No 63
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=22.55 E-value=67 Score=30.10 Aligned_cols=39 Identities=26% Similarity=0.349 Sum_probs=26.6
Q ss_pred EeeCCCCCCceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChhHH
Q 011402 269 KTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (486)
Q Consensus 269 ~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~ 324 (486)
..|+. ....|.+ .|.||.+.+. +++|||++.+++|..-.
T Consensus 8 ~~~~~-~~~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 8 NTPTA-NDEEYIT---PVTIGGTTLN-------------LNFDTGSADLWVFSTEL 46 (323)
T ss_dssp EEECG-GGSCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeecC-CCCEEEE---EEEECCEEEE-------------EEEeCCCcceEEecCCC
Confidence 34543 3455664 4677755543 99999999999998643
No 64
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=22.24 E-value=66 Score=30.17 Aligned_cols=39 Identities=26% Similarity=0.302 Sum_probs=26.6
Q ss_pred EeeCCCCCCceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecChhHH
Q 011402 269 KTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (486)
Q Consensus 269 ~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~ 324 (486)
..|+. ....|.+ .|.||.+.+. ++||||++.+++|..-.
T Consensus 8 ~~~~~-~~~~Y~~---~i~iG~q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 8 TNPTS-NDEEYIT---QVTVGDDTLG-------------LDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEECG-GGCCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeEcC-CCCEEEE---EEEECCEEEE-------------EEEcCCCcceEEecCCC
Confidence 34543 3455654 4677755443 99999999999998643
No 65
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=21.71 E-value=61 Score=25.62 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=24.2
Q ss_pred ceEEEEEEEEEcCEEeecCCcccccCCCCceEEeccCceeecCh
Q 011402 278 HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (486)
Q Consensus 278 ~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~ 321 (486)
.|.=.+. +.|+|+.+. +++|||.-.+.+.+
T Consensus 11 l~~rP~v-ikI~Gq~~e-------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK-------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE-------------EEecCCCCcEEEcc
Confidence 4555566 999999764 99999999888875
No 66
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=21.12 E-value=69 Score=30.17 Aligned_cols=15 Identities=27% Similarity=0.789 Sum_probs=13.7
Q ss_pred eEEeccCceeecChh
Q 011402 308 TIIDSGTTLAYLPEM 322 (486)
Q Consensus 308 ~iiDSGtt~~~lp~~ 322 (486)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 29 VIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEECCCcceEEEcC
Confidence 999999999999864
No 67
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=20.15 E-value=83 Score=27.90 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=24.4
Q ss_pred cccEEE---EEEeCCC----CceEEEEEEcCCCeeeEeCC
Q 011402 73 VGLYYA---KIGIGTP----PKDYYVQVDTGSDIMWVNCI 105 (486)
Q Consensus 73 ~~~Y~~---~i~iGtP----~q~~~v~vDTGSs~~Wv~~~ 105 (486)
..+|.+ .|+||.- .....+++|||++.+++|..
T Consensus 98 ~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 98 KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 345655 4678752 24578999999999999874
Done!