Query 011406
Match_columns 486
No_of_seqs 172 out of 1118
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 07:29:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011406.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011406hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2iuw_A Alkylated repair protei 100.0 4.1E-35 1.4E-39 285.4 12.7 185 75-278 38-234 (238)
2 3s57_A Alpha-ketoglutarate-dep 100.0 2.9E-34 9.8E-39 273.8 13.2 181 77-274 9-203 (204)
3 3tht_A Alkylated DNA repair pr 100.0 4.3E-33 1.5E-37 284.9 12.7 179 73-276 107-315 (345)
4 3i3q_A Alpha-ketoglutarate-dep 100.0 1.6E-31 5.6E-36 256.7 16.8 190 74-278 4-207 (211)
5 3lfm_A Protein FTO; FAT MASS a 98.3 2.3E-06 8E-11 89.7 10.5 168 89-274 53-315 (495)
6 2jig_A Prolyl-4 hydroxylase; h 97.3 0.0014 4.9E-08 62.0 11.0 168 73-270 16-213 (224)
7 3dkq_A PKHD-type hydroxylase S 97.3 0.00025 8.5E-09 69.3 5.5 148 77-270 19-191 (243)
8 3itq_A Prolyl 4-hydroxylase, a 96.9 0.0022 7.5E-08 61.5 8.4 152 75-270 37-208 (216)
9 2hbt_A EGL nine homolog 1; pro 95.7 0.21 7.3E-06 48.3 14.9 80 182-270 119-209 (247)
10 2a1x_A Phytanoyl-COA dioxygena 91.3 4 0.00014 39.5 14.5 41 232-276 214-256 (308)
11 2rg4_A Uncharacterized protein 89.1 1 3.4E-05 42.6 7.9 88 180-271 103-204 (216)
12 2fct_A Syringomycin biosynthes 86.9 3.3 0.00011 40.1 10.3 42 232-277 218-263 (313)
13 3kt7_A PKHD-type hydroxylase T 81.8 14 0.00049 40.6 13.2 91 177-272 122-226 (633)
14 2opw_A Phyhd1 protein; double- 30.6 50 0.0017 31.3 4.8 58 232-305 226-285 (291)
15 1w9y_A 1-aminocyclopropane-1-c 25.4 1.1E+02 0.0038 30.1 6.4 79 181-273 156-252 (319)
16 1gp6_A Leucoanthocyanidin diox 23.6 85 0.0029 31.4 5.2 79 181-273 211-306 (356)
No 1
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=100.00 E-value=4.1e-35 Score=285.45 Aligned_cols=185 Identities=16% Similarity=0.227 Sum_probs=147.8
Q ss_pred cCCceEEeCCCCCHHHHHHHHHHH-HhHHhcCCceeecCceEEecccccccCCceeeecC-CcccCCCCCcccCCCCCCC
Q 011406 75 VVDGLKLYEEVSGNSEVSKLVSLV-NDLRTAGKRGQIQGPAYVVSKRPIRGHGREVIQLG-LPIVDGPPEDEIAGGTSRD 152 (486)
Q Consensus 75 vvpGL~l~pdFLS~eEe~~Lls~L-~el~~s~Rr~qlyG~t~~~~rr~~kg~gR~~~q~G-~~Y~y~~~ed~n~~g~~~~ 152 (486)
.++||.|+++||+.+|+++||+.| ++++|......+||+.+..+|+. ..+| +.|.|... ..
T Consensus 38 ~i~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~~~~~~R~~--------~~~g~~~Y~Ys~~---------~~ 100 (238)
T 2iuw_A 38 GVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLT--------AWYGELPYTYSRI---------TM 100 (238)
T ss_dssp SCEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEECSSEE--------EEEECCCTTSCHH---------HH
T ss_pred CCCcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCcccccCCee--------EEcCCCccccCCc---------cc
Confidence 467899999999999999999999 57889888888899988887654 3455 56777421 11
Q ss_pred CCCCCCcHHHHHHHHHHHhCccCCCCCCEEEEeccCCCC-CCCCCCCC-CCCC--CCEEEEEc-CceeeEeeeccCCCCC
Q 011406 153 RRIEPIPSLLQDVIDRLVGLQIMTVKPDSCIVDVFNEGD-HSQPHISP-SWFG--RPVCILFL-TECDMTFGRMIGIDHP 227 (486)
Q Consensus 153 ~~~~PiP~~L~~LidRLv~~~vl~~~PNqcLIN~Y~pGd-gI~pHvD~-p~fg--~PIvsLSL-S~cvM~Fgr~~~~~~~ 227 (486)
...++||++|..|++++.+ +.+..||+||||+|++|+ +|+||+|. ..|+ .+|++||| ++|+|.|+++...+..
T Consensus 101 ~~~p~wp~~l~~l~~~~~~--~~g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~~~ 178 (238)
T 2iuw_A 101 EPNPHWHPVLRTLKNRIEE--NTGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEEN 178 (238)
T ss_dssp CCBSSCCHHHHHHHHHHHH--HHSCCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC----
T ss_pred CCCCCCCHHHHHHHHHHHH--HhCCCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCcccc
Confidence 2335899999999888743 346899999999999996 99999975 4677 79999999 9999999987542111
Q ss_pred CC--CcccEEEEecCCcEEEeccccccccccccCCC---CCCeEEEEcccccCCCC
Q 011406 228 GD--YRGTLRLSVAPGSLLVMQGKSADIAKHAISSI---RKQRILVTFTKSQPKKL 278 (486)
Q Consensus 228 g~--~r~~~~L~L~~GSLLVMsGeAR~~WkHgIPk~---r~~RISLTFRkV~p~~~ 278 (486)
++ ....++|.|++||||||.|++|+.|+|+|++. +++|||||||++.+...
T Consensus 179 ~~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR~v~~~~~ 234 (238)
T 2iuw_A 179 GDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYPDPR 234 (238)
T ss_dssp ----CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEECCCC---
T ss_pred CcccCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEeeecccccc
Confidence 21 13579999999999999999999999999996 89999999999987654
No 2
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=100.00 E-value=2.9e-34 Score=273.79 Aligned_cols=181 Identities=20% Similarity=0.273 Sum_probs=149.5
Q ss_pred Cc-eEEeCCCCCHHHHHHHHHHH-HhHHh---cCCceeecCceEEecccccccCCceeeecCCcccCCCCCcccCCCCCC
Q 011406 77 DG-LKLYEEVSGNSEVSKLVSLV-NDLRT---AGKRGQIQGPAYVVSKRPIRGHGREVIQLGLPIVDGPPEDEIAGGTSR 151 (486)
Q Consensus 77 pG-L~l~pdFLS~eEe~~Lls~L-~el~~---s~Rr~qlyG~t~~~~rr~~kg~gR~~~q~G~~Y~y~~~ed~n~~g~~~ 151 (486)
+| -++|++||+.+|+++|++.| ++++| ++.++++||+.+.++|+.. ++.+-|..|.|+. .
T Consensus 9 ~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~pR~~~-----wyg~~~~~Y~Ysg----------~ 73 (204)
T 3s57_A 9 EGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQA-----TYGDAGLTYTFSG----------L 73 (204)
T ss_dssp TTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEECSSEEE-----EEECTTCCEEETT----------E
T ss_pred CCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEeccCcEEE-----EECCCCCCcccCC----------C
Confidence 67 46799999999999999998 57889 7788999999999988763 4555567888852 1
Q ss_pred CCCCCCCcHHHHHHHHHHHhCccCCCCCCEEEEeccCCCC-CCCCCCCC-CC--CCCCEEEEEc-CceeeEeeeccCCCC
Q 011406 152 DRRIEPIPSLLQDVIDRLVGLQIMTVKPDSCIVDVFNEGD-HSQPHISP-SW--FGRPVCILFL-TECDMTFGRMIGIDH 226 (486)
Q Consensus 152 ~~~~~PiP~~L~~LidRLv~~~vl~~~PNqcLIN~Y~pGd-gI~pHvD~-p~--fg~PIvsLSL-S~cvM~Fgr~~~~~~ 226 (486)
.....+||++|..|++++.+ +++..||+||||+|++|+ +|+||+|. .. ++.+|++||| ++|+|.|+++...+.
T Consensus 74 ~~~~~pwp~~L~~l~~~~~~--~~g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~~ 151 (204)
T 3s57_A 74 TLSPKPWIPVLERIRDHVSG--VTGQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGK 151 (204)
T ss_dssp EECCEECCHHHHHHHHHHHH--HHCCCCSEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCSS
T ss_pred cccCCCCCHHHHHHHHHHHH--HhCCCCceeEEEEECCCCCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCCcc
Confidence 23457999999999998743 467899999999999998 89999976 44 4689999999 999999998753210
Q ss_pred -CCCCcccEEEEecCCcEEEeccccccccccccCCCC---CCeEEEEccccc
Q 011406 227 -PGDYRGTLRLSVAPGSLLVMQGKSADIAKHAISSIR---KQRILVTFTKSQ 274 (486)
Q Consensus 227 -~g~~r~~~~L~L~~GSLLVMsGeAR~~WkHgIPk~r---~~RISLTFRkV~ 274 (486)
.......++|.|++||||||.|++|+.|+|+|++.. ++|||||||++.
T Consensus 152 ~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR~i~ 203 (204)
T 3s57_A 152 SPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKIL 203 (204)
T ss_dssp SCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEECBC
T ss_pred ccccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEeeeec
Confidence 111235799999999999999999999999999965 899999999985
No 3
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=100.00 E-value=4.3e-33 Score=284.92 Aligned_cols=179 Identities=21% Similarity=0.286 Sum_probs=129.2
Q ss_pred cccCCceEEeCCCCCHHHHHHHHHHHHhHHhcCCceeecCceEEecccccccCCceeeecCCcccCCCCCcccCCCCCCC
Q 011406 73 VNVVDGLKLYEEVSGNSEVSKLVSLVNDLRTAGKRGQIQGPAYVVSKRPIRGHGREVIQLGLPIVDGPPEDEIAGGTSRD 152 (486)
Q Consensus 73 VnvvpGL~l~pdFLS~eEe~~Lls~L~el~~s~Rr~qlyG~t~~~~rr~~kg~gR~~~q~G~~Y~y~~~ed~n~~g~~~~ 152 (486)
..+++||+|++||||++|+++|++. +.|....+.+||+++. .+|++..||+.|+|+.... ...
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~---i~w~~~~~~~~~~~~l--------~~Rr~~~yG~~Y~Ys~~~~------~~~ 169 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLES---VDWTEDTDNQNSQKSL--------KHRRVKHFGYEFHYENNNV------DKD 169 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTT---CC------------------------CEEECCC-------------------
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHh---cccCCccccccCcccc--------cCceEEEECCccccccccc------ccC
Confidence 3567899999999999999987654 4577777777775443 3567789999999963211 111
Q ss_pred CC-CCCCcHHHHHHHHHHHhCccCCCCCCEEEEeccCCCCCCCCCCCC-CCCCCCEEEEEc-CceeeEeeeccCCCCCCC
Q 011406 153 RR-IEPIPSLLQDVIDRLVGLQIMTVKPDSCIVDVFNEGDHSQPHISP-SWFGRPVCILFL-TECDMTFGRMIGIDHPGD 229 (486)
Q Consensus 153 ~~-~~PiP~~L~~LidRLv~~~vl~~~PNqcLIN~Y~pGdgI~pHvD~-p~fg~PIvsLSL-S~cvM~Fgr~~~~~~~g~ 229 (486)
.. ..+||+||..|++|+.+.++++..||+||||+|++|++|+||+|. ..|+.+|++||| ++|+|.|++..
T Consensus 170 ~p~p~~~P~~L~~l~~r~~~~~~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~~~~~I~slSLG~~~~f~f~~~~------- 242 (345)
T 3tht_A 170 KPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPD------- 242 (345)
T ss_dssp -----CCCHHHHHHHHHHHHHTSCSSCCSEEEEEEECTTCCEEEECCCTTTBCSCEEEEEESSCEEEEEECTT-------
T ss_pred CCCCcCcCHHHHHHHHHHHhcccCCCCCCEEEEEEecCCCCEeeccCCchhcCCeEEEEECCCceeEEEccCC-------
Confidence 22 467999999999999876777899999999999999999999965 578999999999 99999999852
Q ss_pred CcccEEEEecCCcEEEeccccccccccccCCC---------------------------CCCeEEEEcccccCC
Q 011406 230 YRGTLRLSVAPGSLLVMQGKSADIAKHAISSI---------------------------RKQRILVTFTKSQPK 276 (486)
Q Consensus 230 ~r~~~~L~L~~GSLLVMsGeAR~~WkHgIPk~---------------------------r~~RISLTFRkV~p~ 276 (486)
...++|.|++||||||.|++|+.|+|+|++. |+.|||||||+|+..
T Consensus 243 -~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 243 -GIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp -SCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred -CceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 1368999999999999999999999999981 567999999999865
No 4
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=99.97 E-value=1.6e-31 Score=256.65 Aligned_cols=190 Identities=16% Similarity=0.242 Sum_probs=144.3
Q ss_pred ccCCceEEeCCCCCHHHHHHHHHHHHhHHhcC--CceeecCceEEecccccccCCceeeecCCcccCCCCCcccCCCCCC
Q 011406 74 NVVDGLKLYEEVSGNSEVSKLVSLVNDLRTAG--KRGQIQGPAYVVSKRPIRGHGREVIQLGLPIVDGPPEDEIAGGTSR 151 (486)
Q Consensus 74 nvvpGL~l~pdFLS~eEe~~Lls~L~el~~s~--Rr~qlyG~t~~~~rr~~kg~gR~~~q~G~~Y~y~~~ed~n~~g~~~ 151 (486)
.+.||+.++++|+. +++++|++.|+++.|.. |+....|......+.+..|+-.|+.+- ..|.|+... ...
T Consensus 4 ~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~~~pgg~~~s~~~~~~g~~~W~~d~-~~Y~Ys~~~------~~~ 75 (211)
T 3i3q_A 4 PLAAGAVILRRFAF-NAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHR-QGYLYSPID------PQT 75 (211)
T ss_dssp CCBTTBEEETTTTT-TTHHHHHHHHHHHHHHSCCBCCBCTTSCBCSSEEEEESSBEEEEET-TEEEEESBC------TTT
T ss_pred ecCCCCEEECCcCh-HHHHHHHHHHHHHHhcCCCceeEcCCCCcCchhhcccccceeecCC-CCcCcCCCc------cCC
Confidence 35689999999998 68899999999988765 466666543333333322222355443 367775211 013
Q ss_pred CCCCCCCcHHHHHHHHHHHhCccC-CCCCCEEEEeccCCCCCCCCCCC--CCCCCCCEEEEEc-CceeeEeeeccCCCCC
Q 011406 152 DRRIEPIPSLLQDVIDRLVGLQIM-TVKPDSCIVDVFNEGDHSQPHIS--PSWFGRPVCILFL-TECDMTFGRMIGIDHP 227 (486)
Q Consensus 152 ~~~~~PiP~~L~~LidRLv~~~vl-~~~PNqcLIN~Y~pGdgI~pHvD--~p~fg~PIvsLSL-S~cvM~Fgr~~~~~~~ 227 (486)
...+.+||++|..|++++.....+ ...||+||||+|++|++|+||+| +..|+.+|++||| ++|+|.|++...
T Consensus 76 ~~pw~~~P~~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~~~---- 151 (211)
T 3i3q_A 76 NKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKR---- 151 (211)
T ss_dssp SSBCCCCCHHHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSCTTSCEEEEEEESCEEEEECCSST----
T ss_pred CCCCCchHHHHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccccCCCEEEEECCCCeEEEEecccC----
Confidence 456888999999999998654333 46889999999999999999998 3468999999999 999999997632
Q ss_pred CCCcccEEEEecCCcEEEeccccccccccccCCCC--------CCeEEEEcccccCCCC
Q 011406 228 GDYRGTLRLSVAPGSLLVMQGKSADIAKHAISSIR--------KQRILVTFTKSQPKKL 278 (486)
Q Consensus 228 g~~r~~~~L~L~~GSLLVMsGeAR~~WkHgIPk~r--------~~RISLTFRkV~p~~~ 278 (486)
....++|.|++||||||.|++|+ |+|+|++.. ++|||||||++.+..+
T Consensus 152 --~~~~~~i~L~~GsllvM~G~~r~-~~H~I~~~~~~~~p~~~~~RIsLTFR~~~~~~~ 207 (211)
T 3i3q_A 152 --NDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKEN 207 (211)
T ss_dssp --TSCCEEEEECTTCEEEECGGGTT-CCEEECCCCCCCBTTTBTCEEEEEEECCSCC--
T ss_pred --CCceEEEECCCCCEEEECchHHc-eEeccCcccCCcCCCCCCCEEEEEeeeccCCcC
Confidence 12468999999999999999997 999999955 4799999999987553
No 5
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=98.28 E-value=2.3e-06 Score=89.70 Aligned_cols=168 Identities=13% Similarity=0.064 Sum_probs=106.7
Q ss_pred HHHHHHHHHH-HhHHhcCCceeecCceEEecccccccCCceeeecCCcccCCCCCcccCCCCCCCCCCCCCcH-------
Q 011406 89 SEVSKLVSLV-NDLRTAGKRGQIQGPAYVVSKRPIRGHGREVIQLGLPIVDGPPEDEIAGGTSRDRRIEPIPS------- 160 (486)
Q Consensus 89 eEe~~Lls~L-~el~~s~Rr~qlyG~t~~~~rr~~kg~gR~~~q~G~~Y~y~~~ed~n~~g~~~~~~~~PiP~------- 160 (486)
.|.++||+.| .++.|.++.+.+||+++..+|+.. ++.+.|+.|.|+- ....+.||++
T Consensus 53 ~~vd~lF~~Ll~ei~WqQD~IrIfGK~v~tPRLtA-----WyGD~g~tY~YSG----------i~l~p~PWTp~~~~~~~ 117 (495)
T 3lfm_A 53 KEVQEAFLTLHKHGCLFRDLVRIQGKDLLTPVSRI-----LIGNPGCTYKYLN----------TRLFTVPWPVKGSNIKH 117 (495)
T ss_dssp HHHHHHHHHHHHTTCCBCCEECGGGCCEECSSEEE-----EEESTTBEEEETT----------EEEECEECCCC------
T ss_pred HHHHHHHHHHHhcCCCCCCchhcCCceeccceeEE-----EecCCCCceecCC----------CcccCCCCCcccCcccc
Confidence 4778888876 579999999999999999999874 6888999999962 1223344443
Q ss_pred -------HHHHH--------------HHHHHh---------------------Ccc----------C-CCCCCEEEEecc
Q 011406 161 -------LLQDV--------------IDRLVG---------------------LQI----------M-TVKPDSCIVDVF 187 (486)
Q Consensus 161 -------~L~~L--------------idRLv~---------------------~~v----------l-~~~PNqcLIN~Y 187 (486)
.++.+ ++.+.. .+. . .+.||-.|||++
T Consensus 118 ~~~~~~~a~~a~~~LNd~l~~~t~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~fNvTLlN~M 197 (495)
T 3lfm_A 118 TEAEIAAACETFLKLNDYLQIETIQALEELAAKEKANEDAVPLCMSADFPRVGMGSSYNGQDEVDIKSRAAYNVTLLNFM 197 (495)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------------------CHHHHHHHTCCCEEEEEEE
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccCCCcccCCcccccccCcceeehhhhhcc
Confidence 22221 111100 000 0 137999999998
Q ss_pred CCCC----------C-----CCCCCCCCCCCC-CEEEEEc---Cce---------------eeEeeeccCCCCCCCCccc
Q 011406 188 NEGD----------H-----SQPHISPSWFGR-PVCILFL---TEC---------------DMTFGRMIGIDHPGDYRGT 233 (486)
Q Consensus 188 ~pGd----------g-----I~pHvD~p~fg~-PIvsLSL---S~c---------------vM~Fgr~~~~~~~g~~r~~ 233 (486)
++-+ + .+||.|+.--+. +|++-+- .+. ....+=+... .+ ..+.
T Consensus 198 dp~~m~~LKeEpyfgMGKmaVsWHhDenL~~~StVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglkiaw--Di-~tP~ 274 (495)
T 3lfm_A 198 DPQKMPYLKEEPYFGMGKMAVSWHHDENLVDRSAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKISW--DI-ETPG 274 (495)
T ss_dssp CSSCSSSCCBCSSSCCCBEEEEEECCCSBCTTCCEEEEEEECCC-------------CCTTSEEEEEEETT--CC-SSCE
T ss_pred CcccccccccccccCCcceeeeeccccccccCcceEEEEeecCCccccccccccCCCCCccceeEeeeecc--cC-CCCc
Confidence 8753 1 135555543322 4443221 100 0000001000 01 1246
Q ss_pred EEEEecCCcEEEeccccccccccccCCCCCCeEEEEccccc
Q 011406 234 LRLSVAPGSLLVMQGKSADIAKHAISSIRKQRILVTFTKSQ 274 (486)
Q Consensus 234 ~~L~L~~GSLLVMsGeAR~~WkHgIPk~r~~RISLTFRkV~ 274 (486)
+.|.|..||++.|-++.....+|+|-.-...|+|=|.|-..
T Consensus 275 L~vpL~sgd~Y~Mldd~N~~HqH~VlaG~~~RfSSTHRVA~ 315 (495)
T 3lfm_A 275 LAIPLHQGDCYFMLDDLNATHQHCVLAGSQPRFSSTHRVAE 315 (495)
T ss_dssp EEEEECTTCEEEECTTHHHHEEEEEECCSSCEEEEEEECBC
T ss_pred eeeecCCCCeeeecchhhhhhhhhhhcCCCccccccceeee
Confidence 99999999999999999999999999988899999999654
No 6
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=97.28 E-value=0.0014 Score=61.97 Aligned_cols=168 Identities=13% Similarity=0.158 Sum_probs=96.3
Q ss_pred cccCCceEEeCCCCCHHHHHHHHHHHHhHHhcCCceee-c---CceEEecccccccCCceeeecCCcccCCCCCcccCCC
Q 011406 73 VNVVDGLKLYEEVSGNSEVSKLVSLVNDLRTAGKRGQI-Q---GPAYVVSKRPIRGHGREVIQLGLPIVDGPPEDEIAGG 148 (486)
Q Consensus 73 VnvvpGL~l~pdFLS~eEe~~Lls~L~el~~s~Rr~ql-y---G~t~~~~rr~~kg~gR~~~q~G~~Y~y~~~ed~n~~g 148 (486)
+..-|-+.+|+||||++|+++|++.+... + ++..+ . |......-|.- ...++
T Consensus 16 ls~~P~i~~~~~fLs~~Ec~~li~~~~~~-~--~~s~v~~~~~g~~~~~~~R~s-----~~~~l---------------- 71 (224)
T 2jig_A 16 LSWSPRAFLLKNFLSDEECDYIVEKARPK-M--VKSSVVDNESGKSVDSEIRTS-----TGTWF---------------- 71 (224)
T ss_dssp EETTTTEEEETTCSCHHHHHHHHHHHGGG-C--EECEEEETTTTEEEECSSBCS-----EEEEC----------------
T ss_pred EeCCCCEEEEcccCCHHHHHHHHHHhhcc-C--eeeeeecCCCCcccccCCEEE-----eeeEe----------------
Confidence 44557889999999999999999887641 1 11111 1 11111100100 00000
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhCccCC-CCCCEEEEeccCCCCCCCCCCCCCC---------CCCCEEEEE--cCce--
Q 011406 149 TSRDRRIEPIPSLLQDVIDRLVGLQIMT-VKPDSCIVDVFNEGDHSQPHISPSW---------FGRPVCILF--LTEC-- 214 (486)
Q Consensus 149 ~~~~~~~~PiP~~L~~LidRLv~~~vl~-~~PNqcLIN~Y~pGdgI~pHvD~p~---------fg~PIvsLS--LS~c-- 214 (486)
. ..--+.+..|.+|+.+...++ .....+.+..|..|+.-.+|.|... .+..++++. |++.
T Consensus 72 ---~---~~~~~~~~~i~~ri~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~ 145 (224)
T 2jig_A 72 ---A---KGEDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEE 145 (224)
T ss_dssp ---C---TTCSHHHHHHHHHHHHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSE
T ss_pred ---c---CCCCHHHHHHHHHHHHHhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCC
Confidence 0 001345677777775533343 3334577888999999999998421 245677754 4432
Q ss_pred --eeEeeeccCCCCCCCC----cccEEEEecCCcEEEec-----cccccccccccCCC-CCCeEEEEc
Q 011406 215 --DMTFGRMIGIDHPGDY----RGTLRLSVAPGSLLVMQ-----GKSADIAKHAISSI-RKQRILVTF 270 (486)
Q Consensus 215 --vM~Fgr~~~~~~~g~~----r~~~~L~L~~GSLLVMs-----GeAR~~WkHgIPk~-r~~RISLTF 270 (486)
...|-........... ...+.|....|++||+. |..-....|++.++ .+.|+.+|.
T Consensus 146 GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~ 213 (224)
T 2jig_A 146 GGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATK 213 (224)
T ss_dssp ECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEE
T ss_pred CCceeCCCcccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEE
Confidence 2344221100000001 12589999999999994 44455678999996 688988876
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=97.26 E-value=0.00025 Score=69.32 Aligned_cols=148 Identities=18% Similarity=0.223 Sum_probs=87.1
Q ss_pred CceEEeCCCCCHHHHHHHHHHHHhHHhcCCceeecCc-eEEecccccccCCceeeecCCcccCCCCCcccCCCCCCCCCC
Q 011406 77 DGLKLYEEVSGNSEVSKLVSLVNDLRTAGKRGQIQGP-AYVVSKRPIRGHGREVIQLGLPIVDGPPEDEIAGGTSRDRRI 155 (486)
Q Consensus 77 pGL~l~pdFLS~eEe~~Lls~L~el~~s~Rr~qlyG~-t~~~~rr~~kg~gR~~~q~G~~Y~y~~~ed~n~~g~~~~~~~ 155 (486)
.++..|+||||++|+++|++.++...|..-+. .-|. ...+ | .-.++ ..
T Consensus 19 ~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~-t~g~~~~~v-r--------~n~~l---------------------~~ 67 (243)
T 3dkq_A 19 GMLIEIPNVFSKQEVSHLREQLDARRWIDGNQ-TSGAMATTR-K--------RNQQL---------------------DK 67 (243)
T ss_dssp TTBEEECCSSCHHHHHHHHHHHHTSCCEEECC-CSSBSSCCC-E--------EEEEC---------------------CT
T ss_pred CCEEEECCCCCHHHHHHHHHHHhhCCCccCcc-cCCCccccc-e--------eeeEE---------------------CC
Confidence 56889999999999999999987655421000 0010 0000 0 00000 00
Q ss_pred CCCcHHHHHHHHHHHhC---c--c----CCCCCCEEEEeccCCCCCCCCCCCCCCCC------CCEEE--EEcCc-----
Q 011406 156 EPIPSLLQDVIDRLVGL---Q--I----MTVKPDSCIVDVFNEGDHSQPHISPSWFG------RPVCI--LFLTE----- 213 (486)
Q Consensus 156 ~PiP~~L~~LidRLv~~---~--v----l~~~PNqcLIN~Y~pGdgI~pHvD~p~fg------~PIvs--LSLS~----- 213 (486)
. -++...|.+|+.+. . + ++.+...+.++.|..|+.-.+|.|..... +.+++ +-|++
T Consensus 68 d--~~~~~~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~ 145 (243)
T 3dkq_A 68 D--DPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQ 145 (243)
T ss_dssp T--CHHHHHHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEE
T ss_pred C--CHHHHHHHHHHHHHHccCcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCC
Confidence 0 12455666665321 1 0 11223348899999999999999864221 22343 34444
Q ss_pred -eeeEeeeccCCCCCCCCcccEEEEecCCcEEEeccccccccccccCCC-CCCeEEEEc
Q 011406 214 -CDMTFGRMIGIDHPGDYRGTLRLSVAPGSLLVMQGKSADIAKHAISSI-RKQRILVTF 270 (486)
Q Consensus 214 -cvM~Fgr~~~~~~~g~~r~~~~L~L~~GSLLVMsGeAR~~WkHgIPk~-r~~RISLTF 270 (486)
-.+.|... .+...|.++.|++|++... ..|++.++ ++.|+++|+
T Consensus 146 GGetvf~~~---------~~~~~V~P~~G~~v~F~s~----~lH~v~pV~~G~R~~~~~ 191 (243)
T 3dkq_A 146 GGELVIQDT---------YGQQSIKLSAGSLVLYPSS----SLHQVTPVLSGERTAAFM 191 (243)
T ss_dssp ECCEEEEET---------TEEEEECCCTTCEEEEETT----SEEEECCEEEECEEEEEE
T ss_pred CceEEEeeC---------CCcEEEecCCCEEEEECCC----CeEcCccccccCEEEEEE
Confidence 12333221 1247799999999999753 57999995 689999997
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=96.92 E-value=0.0022 Score=61.47 Aligned_cols=152 Identities=12% Similarity=0.154 Sum_probs=90.8
Q ss_pred cCCceEEeCCCCCHHHHHHHHHHHHhHHhcCCceee-cCceEEecccccccCCceeeecCCcccCCCCCcccCCCCCCCC
Q 011406 75 VVDGLKLYEEVSGNSEVSKLVSLVNDLRTAGKRGQI-QGPAYVVSKRPIRGHGREVIQLGLPIVDGPPEDEIAGGTSRDR 153 (486)
Q Consensus 75 vvpGL~l~pdFLS~eEe~~Lls~L~el~~s~Rr~ql-yG~t~~~~rr~~kg~gR~~~q~G~~Y~y~~~ed~n~~g~~~~~ 153 (486)
.-|.+.+|+|||+++|++.|++.....- ++-.+ .+. ..-.-|. +...
T Consensus 37 ~~P~i~~~~~fLs~~Ec~~Li~~a~~~l---~~s~v~~~~-~~~~~Rt----------------------------S~~~ 84 (216)
T 3itq_A 37 EEPLIVVLGNVLSDEECDELIELSKSKL---ARSKVGSSR-DVNDIRT----------------------------SSGA 84 (216)
T ss_dssp TTTTEEEEESCSCHHHHHHHHHHHHHHH---C---------CCCCGGG----------------------------TTCE
T ss_pred CCCCEEEECCcCCHHHHHHHHHHhhccc---ccceeccCC-ccCCcEe----------------------------eeeE
Confidence 4589999999999999999998876421 11111 110 0000000 0011
Q ss_pred CCCCCcHHHHHHHHHHHhCccCC-CCCCEEEEeccCCCCCCCCCCCCCC------CCCCEEEEE--cCce----eeEeee
Q 011406 154 RIEPIPSLLQDVIDRLVGLQIMT-VKPDSCIVDVFNEGDHSQPHISPSW------FGRPVCILF--LTEC----DMTFGR 220 (486)
Q Consensus 154 ~~~PiP~~L~~LidRLv~~~vl~-~~PNqcLIN~Y~pGdgI~pHvD~p~------fg~PIvsLS--LS~c----vM~Fgr 220 (486)
-... .+.+..|.+|+.+.-.++ ...+.+-+..|..|+.-.+|.|... .+..++++. |++. ...|-
T Consensus 85 wl~~-~~~v~~i~~Ri~~~~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp- 162 (216)
T 3itq_A 85 FLDD-NELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFP- 162 (216)
T ss_dssp ECCC-CHHHHHHHHHHHHHHTSCGGGBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEET-
T ss_pred EeCC-cHHHHHHHHHHHHhcCceeccccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEec-
Confidence 1112 456777888875432233 2234577888999999999998532 245677653 3432 12221
Q ss_pred ccCCCCCCCCcccEEEEecCCcEEEecc-----ccccccccccCCC-CCCeEEEEc
Q 011406 221 MIGIDHPGDYRGTLRLSVAPGSLLVMQG-----KSADIAKHAISSI-RKQRILVTF 270 (486)
Q Consensus 221 ~~~~~~~g~~r~~~~L~L~~GSLLVMsG-----eAR~~WkHgIPk~-r~~RISLTF 270 (486)
...++|....|++|++.. +......|+..++ .+.|+.+|.
T Consensus 163 ----------~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~ 208 (216)
T 3itq_A 163 ----------KLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQ 208 (216)
T ss_dssp ----------TTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEE
T ss_pred ----------CCCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEe
Confidence 124788899999999975 2223568999995 578998875
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.75 E-value=0.21 Score=48.33 Aligned_cols=80 Identities=11% Similarity=0.054 Sum_probs=52.4
Q ss_pred EEEeccCC-CCCCCCCCCCCCCCCCEEEE--EcCce--------eeEeeeccCCCCCCCCcccEEEEecCCcEEEecccc
Q 011406 182 CIVDVFNE-GDHSQPHISPSWFGRPVCIL--FLTEC--------DMTFGRMIGIDHPGDYRGTLRLSVAPGSLLVMQGKS 250 (486)
Q Consensus 182 cLIN~Y~p-GdgI~pHvD~p~fg~PIvsL--SLS~c--------vM~Fgr~~~~~~~g~~r~~~~L~L~~GSLLVMsGeA 250 (486)
+-+..|.+ |++..+|.|.+.-....+++ -|.+. .+.|.... .....+|.-..|.|++|..+.
T Consensus 119 ~~~~~Y~~~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~-------~~~~~~v~P~~grlv~F~s~~ 191 (247)
T 2hbt_A 119 AMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEG-------KAQFADIEPKFDRLLFFWSDR 191 (247)
T ss_dssp EEEEEECSSSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTT-------CSSCEEECCBTTEEEEEECST
T ss_pred EEEEEecCCCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCC-------CCceEEEEcCCCEEEEEecCC
Confidence 66778995 99999999874333344442 34321 22322110 012467777889999998543
Q ss_pred ccccccccCCCCCCeEEEEc
Q 011406 251 ADIAKHAISSIRKQRILVTF 270 (486)
Q Consensus 251 R~~WkHgIPk~r~~RISLTF 270 (486)
+ ..|++.+..+.|++||.
T Consensus 192 ~--~~H~V~p~~~~R~sit~ 209 (247)
T 2hbt_A 192 R--NPHEVQPAYATRYAITV 209 (247)
T ss_dssp T--CCEEECCBSSCEEEEEE
T ss_pred C--ceeeeccCCCEEEEEEE
Confidence 2 46999998899999996
No 10
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=91.31 E-value=4 Score=39.54 Aligned_cols=41 Identities=10% Similarity=0.128 Sum_probs=31.6
Q ss_pred ccEEEEecCCcEEEeccccccccccccCC--CCCCeEEEEcccccCC
Q 011406 232 GTLRLSVAPGSLLVMQGKSADIAKHAISS--IRKQRILVTFTKSQPK 276 (486)
Q Consensus 232 ~~~~L~L~~GSLLVMsGeAR~~WkHgIPk--~r~~RISLTFRkV~p~ 276 (486)
..+.+.++.||+|++.+.+ .|+-.+ ....|..|+|+-....
T Consensus 214 ~~v~~~~~aGd~vlf~~~~----~H~s~~N~s~~~R~~~~~~y~~~~ 256 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPLL----IHGSGQNKTQGFRKAISCHFASAD 256 (308)
T ss_dssp CCEEECBCTTCEEEECTTC----CEEECCBCSSSCEEEEEEEEEETT
T ss_pred CeEEccCCCccEEEECCCc----cccCCCCCCCCceEEEEEEEECCC
Confidence 4588999999999999963 355554 4478999999877643
No 11
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=89.11 E-value=1 Score=42.65 Aligned_cols=88 Identities=15% Similarity=0.200 Sum_probs=54.9
Q ss_pred CEEEEeccCCCCCCCCCCCCCCCCCCEEEEEc--CceeeEeeeccCC-----CCCC-CC----cccEEEEecCCcEEEec
Q 011406 180 DSCIVDVFNEGDHSQPHISPSWFGRPVCILFL--TECDMTFGRMIGI-----DHPG-DY----RGTLRLSVAPGSLLVMQ 247 (486)
Q Consensus 180 NqcLIN~Y~pGdgI~pHvD~p~fg~PIvsLSL--S~cvM~Fgr~~~~-----~~~g-~~----r~~~~L~L~~GSLLVMs 247 (486)
..|=+|.|++|+....|.+...+-..|+=|.. ....+.|...... ...+ +. .....+.-..|+|+|+-
T Consensus 103 ~~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFp 182 (216)
T 2rg4_A 103 EDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWE 182 (216)
T ss_dssp EEEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEE
T ss_pred eeEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEEC
Confidence 45778999999999999874321112222344 2346777653210 0000 11 12247888999999995
Q ss_pred cccccccccccCC--CCCCeEEEEcc
Q 011406 248 GKSADIAKHAISS--IRKQRILVTFT 271 (486)
Q Consensus 248 GeAR~~WkHgIPk--~r~~RISLTFR 271 (486)
.. -.|++.+ ..+.||||+|=
T Consensus 183 S~----l~H~V~p~~~~~~RiSIsFN 204 (216)
T 2rg4_A 183 SW----LRHEVPMNMAEEDRISVSFN 204 (216)
T ss_dssp TT----SCEEECCCCSSSCEEEEEEE
T ss_pred CC----CEEeccCCCCCCCEEEEEEE
Confidence 43 5699999 44699999994
No 12
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=86.89 E-value=3.3 Score=40.13 Aligned_cols=42 Identities=10% Similarity=0.120 Sum_probs=32.2
Q ss_pred ccEEEEecCCcEEEeccccccccccccCCC----CCCeEEEEcccccCCC
Q 011406 232 GTLRLSVAPGSLLVMQGKSADIAKHAISSI----RKQRILVTFTKSQPKK 277 (486)
Q Consensus 232 ~~~~L~L~~GSLLVMsGeAR~~WkHgIPk~----r~~RISLTFRkV~p~~ 277 (486)
..+.+.++.||+||+.+.+- |+-.+. ...|+.++||-+....
T Consensus 218 ~~v~~~~~aGd~v~f~~~l~----H~s~~N~~ss~~~R~a~~~~y~~~~~ 263 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTLM----HASYPHSGESQEMRMGFASRYVPSFV 263 (313)
T ss_dssp GCEEECBCTTEEEEEETTSE----EEECCBCSSSSSCEEEEEEEEEETTS
T ss_pred ceeEeeeCCceEEEEeCCce----eeCCCCCCCCCCceEEEEEEEECCCc
Confidence 45889999999999999643 555543 3589999998877653
No 13
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=81.77 E-value=14 Score=40.57 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=52.3
Q ss_pred CCCCEEEEeccCCCCCCCCCCCCCCCCC-CEEE-EEcCce----------eeEeeeccCCCCCCCCcccEEEEecCCcEE
Q 011406 177 VKPDSCIVDVFNEGDHSQPHISPSWFGR-PVCI-LFLTEC----------DMTFGRMIGIDHPGDYRGTLRLSVAPGSLL 244 (486)
Q Consensus 177 ~~PNqcLIN~Y~pGdgI~pHvD~p~fg~-PIvs-LSLS~c----------vM~Fgr~~~~~~~g~~r~~~~L~L~~GSLL 244 (486)
.+++ +-++.|.+|++...|.|. ++. .|.. +-|.+. .+.+........+. .....+|.=..|.|+
T Consensus 122 ~~~D-~~~a~Y~~G~fL~~H~D~--~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~-~d~~~~I~P~fNrLV 197 (633)
T 3kt7_A 122 SKTD-MSINTYTKGCHLLTHDDV--IGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPH-SDPSAKLVPQFNQIA 197 (633)
T ss_dssp SCCC-EEEEEECTTCEEEEECCC--CTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEEC-SSCSEEECCCTTEEE
T ss_pred Ccee-EEEEEeCCCCeeeecCCC--CCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCC-CCceEEEecCCCeEE
Confidence 3555 778999999999999994 343 4443 345321 12222211000000 012355666678999
Q ss_pred EeccccccccccccCCC--CCCeEEEEccc
Q 011406 245 VMQGKSADIAKHAISSI--RKQRILVTFTK 272 (486)
Q Consensus 245 VMsGeAR~~WkHgIPk~--r~~RISLTFRk 272 (486)
+|.-.-...| |+|..+ ...|.|||---
T Consensus 198 ~F~vsp~~S~-H~V~eV~~~~~RlSItGWF 226 (633)
T 3kt7_A 198 FFKVLPGFSF-HDXEEVKVDKHRLSIQGWY 226 (633)
T ss_dssp EEECCTTTCC-EEECCBCSSCCEEEEEEEE
T ss_pred EEEcCCCCCc-CCCCccCCCCCEEEEEEEe
Confidence 9986522234 888775 67898887433
No 14
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=30.57 E-value=50 Score=31.29 Aligned_cols=58 Identities=19% Similarity=0.307 Sum_probs=0.0
Q ss_pred ccEEEEecCCcEEEeccccccccccccCC--CCCCeEEEEcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 011406 232 GTLRLSVAPGSLLVMQGKSADIAKHAISS--IRKQRILVTFTKSQPKKLTPTDGQRLASPGIAPSPHWGPPPGRPP 305 (486)
Q Consensus 232 ~~~~L~L~~GSLLVMsGeAR~~WkHgIPk--~r~~RISLTFRkV~p~~~~~~~~~~~~~p~~~~~~~w~~~~~~~~ 305 (486)
..+.+.++.||+||+.+.+- |+-.+ ....|++++||-+..... .+...+|-+++.--|
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~----H~s~~N~s~~~R~~~~~~~~~~~~~------------~~~~~~~l~~~~~~~ 285 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVV----HKSKQNLSDRSRQAYTFHLMEASGT------------TWSPENWLQPTAELP 285 (291)
T ss_dssp GCEEECBCTTCEEEEETTCE----EEECCBCSSSCCCEEEEEEEECTTC------------EECTTSSCCCCSSCC
T ss_pred CeeecccCCCcEEEEcCCce----ecCCCCCCCCceEEEEEEEEcCCCC------------ccCccccccCCCCCC
No 15
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=25.41 E-value=1.1e+02 Score=30.11 Aligned_cols=79 Identities=11% Similarity=0.139 Sum_probs=50.1
Q ss_pred EEEEeccCCC------CCCCCCCCCCCCCCCEEEEEcC-c--eeeEeeeccCCCCCCCCcccEEEEecCCcEEEeccccc
Q 011406 181 SCIVDVFNEG------DHSQPHISPSWFGRPVCILFLT-E--CDMTFGRMIGIDHPGDYRGTLRLSVAPGSLLVMQGKSA 251 (486)
Q Consensus 181 qcLIN~Y~pG------dgI~pHvD~p~fg~PIvsLSLS-~--cvM~Fgr~~~~~~~g~~r~~~~L~L~~GSLLVMsGeAR 251 (486)
.+-+|+|.+- .++++|.|. .+++|.+. + .=+...+ .| .=+.|.-.+|+++|.-|++=
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~-----g~lTlL~qd~~v~GLQV~~------~g---~Wi~V~p~pgalvVNiGD~l 221 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDA-----GGIILLFQDDKVSGLQLLK------DG---QWIDVPPMRHSIVVNLGDQL 221 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCS-----SSEEEEEESSSCCCEEEEE------TT---EEEECCCCTTCEEEEECHHH
T ss_pred eeEEEecCCCcccccccccccccCC-----CceEEEEecCCCCeeeEee------CC---eEEEcccCCCcEEEEhHHHH
Confidence 4569999742 367899883 24444442 2 1233322 12 23667778999999999988
Q ss_pred cccccccCC---------CCCCeEEEEcccc
Q 011406 252 DIAKHAISS---------IRKQRILVTFTKS 273 (486)
Q Consensus 252 ~~WkHgIPk---------~r~~RISLTFRkV 273 (486)
..|..+.-+ ....|+||.|---
T Consensus 222 ~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~ 252 (319)
T 1w9y_A 222 EVITNGKYKSVMHRVIAQKDGARMSLASFYN 252 (319)
T ss_dssp HHHTTTSSCCCCEEECCCSSSCCEEEEEEEE
T ss_pred HHHhCCeeecccceecCCCCCCceEEEEEec
Confidence 888666544 2457999988543
No 16
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=23.63 E-value=85 Score=31.41 Aligned_cols=79 Identities=13% Similarity=0.124 Sum_probs=49.2
Q ss_pred EEEEeccCCC------CCCCCCCCCCCCCCCEEEEEc-Cc-eeeEeeeccCCCCCCCCcccEEEEecCCcEEEecccccc
Q 011406 181 SCIVDVFNEG------DHSQPHISPSWFGRPVCILFL-TE-CDMTFGRMIGIDHPGDYRGTLRLSVAPGSLLVMQGKSAD 252 (486)
Q Consensus 181 qcLIN~Y~pG------dgI~pHvD~p~fg~PIvsLSL-S~-cvM~Fgr~~~~~~~g~~r~~~~L~L~~GSLLVMsGeAR~ 252 (486)
.+-+|+|.+- -++++|.|. + +++|.+ .+ .=+...+ .| .=+.|.-.+|+++|.-|++=.
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~---g--~lTlL~qd~v~GLQV~~------~g---~Wi~V~p~pgalvVNiGD~l~ 276 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDV---S--ALTFILHNMVPGLQLFY------EG---KWVTAKCVPDSIVMHIGDTLE 276 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCC---S--SEEEEEECSCCCEEEEE------TT---EEEECCCCTTCEEEEECHHHH
T ss_pred eeeeeecCCCCCcccccCcCCccCC---C--eEEEEEEcCCCCeEEec------CC---cEEECcCCCCeEEEEeccHHH
Confidence 3558999642 246788773 2 345545 22 1223222 12 236677789999999999888
Q ss_pred ccccccCC---------CCCCeEEEEcccc
Q 011406 253 IAKHAISS---------IRKQRILVTFTKS 273 (486)
Q Consensus 253 ~WkHgIPk---------~r~~RISLTFRkV 273 (486)
.|..+.-+ ....|+||.|---
T Consensus 277 ~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~ 306 (356)
T 1gp6_A 277 ILSNGKYKSILHRGLVNKEKVRISWAVFCE 306 (356)
T ss_dssp HHTTTSSCCCCEEECCCSSCCEEEEEEEEE
T ss_pred HhcCCEeeccCceecCCCCCCEEEEEEeec
Confidence 88665444 3468999988543
Done!