Query 011407
Match_columns 486
No_of_seqs 177 out of 1437
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 01:01:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011407.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011407hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 1.4E-64 3E-69 531.2 50.3 417 62-478 59-477 (478)
2 PLN02693 IAA-amino acid hydrol 100.0 3.8E-59 8.2E-64 486.9 47.8 391 84-477 33-423 (437)
3 COG1473 AbgB Metal-dependent a 100.0 1.2E-56 2.5E-61 455.0 43.6 378 95-477 9-391 (392)
4 PRK06915 acetylornithine deace 100.0 3.3E-54 7.2E-59 450.4 40.9 376 81-478 2-421 (422)
5 PRK08588 succinyl-diaminopimel 100.0 1.4E-53 3.1E-58 439.2 41.2 359 98-476 2-377 (377)
6 PRK13013 succinyl-diaminopimel 100.0 3.1E-52 6.7E-57 436.2 40.7 371 86-477 4-424 (427)
7 TIGR01891 amidohydrolases amid 100.0 7.5E-52 1.6E-56 424.3 41.5 356 101-460 2-360 (363)
8 PRK07338 hypothetical protein; 100.0 7.6E-51 1.7E-55 422.4 41.9 364 83-476 4-399 (402)
9 PRK06837 acetylornithine deace 100.0 6.8E-51 1.5E-55 425.7 41.2 374 80-476 4-423 (427)
10 PRK06133 glutamate carboxypept 100.0 1.8E-50 3.9E-55 420.3 41.9 368 85-478 26-410 (410)
11 PRK13004 peptidase; Reviewed 100.0 4.3E-50 9.3E-55 416.3 39.4 371 84-477 3-398 (399)
12 PRK08596 acetylornithine deace 100.0 4.3E-50 9.4E-55 418.9 39.6 372 86-479 3-420 (421)
13 PRK13983 diaminopimelate amino 100.0 3.6E-50 7.9E-55 416.9 37.6 364 94-473 1-399 (400)
14 PRK13009 succinyl-diaminopimel 100.0 9.1E-50 2E-54 410.6 39.6 357 99-476 3-375 (375)
15 TIGR03526 selenium_YgeY putati 100.0 1.1E-49 2.5E-54 412.6 38.2 366 86-476 3-395 (395)
16 TIGR03320 ygeY M20/DapE family 100.0 1.4E-49 3.1E-54 411.9 38.1 366 86-476 3-395 (395)
17 TIGR01246 dapE_proteo succinyl 100.0 2.1E-49 4.5E-54 407.3 37.0 353 101-474 2-370 (370)
18 TIGR01910 DapE-ArgE acetylorni 100.0 1.6E-49 3.4E-54 408.9 31.9 348 102-466 2-375 (375)
19 PRK05111 acetylornithine deace 100.0 1.7E-48 3.6E-53 402.3 39.0 349 98-476 5-382 (383)
20 PRK08651 succinyl-diaminopimel 100.0 1.3E-48 2.9E-53 404.5 38.3 358 94-476 2-392 (394)
21 PRK06446 hypothetical protein; 100.0 9E-49 2E-53 410.7 37.2 362 98-475 2-434 (436)
22 TIGR01880 Ac-peptdase-euk N-ac 100.0 2.4E-48 5.3E-53 403.4 38.2 366 97-476 8-399 (400)
23 PRK09133 hypothetical protein; 100.0 6.4E-48 1.4E-52 408.3 38.6 363 95-476 34-470 (472)
24 PRK07907 hypothetical protein; 100.0 1.2E-47 2.7E-52 403.6 40.6 374 84-474 6-446 (449)
25 PRK08201 hypothetical protein; 100.0 1.3E-47 2.9E-52 404.3 40.0 371 85-474 3-453 (456)
26 PRK07522 acetylornithine deace 100.0 4.6E-48 1E-52 399.3 34.7 350 98-475 4-384 (385)
27 PRK00466 acetyl-lysine deacety 100.0 3.1E-47 6.8E-52 387.6 35.7 335 94-477 6-345 (346)
28 PRK09104 hypothetical protein; 100.0 1E-46 2.2E-51 398.3 40.8 375 84-475 5-462 (464)
29 TIGR01892 AcOrn-deacetyl acety 100.0 2.5E-47 5.3E-52 390.8 34.9 339 102-470 1-363 (364)
30 PRK07473 carboxypeptidase; Pro 100.0 1.2E-46 2.6E-51 387.0 40.1 350 94-474 7-375 (376)
31 PRK08262 hypothetical protein; 100.0 5.8E-47 1.3E-51 402.4 35.6 364 94-476 40-485 (486)
32 PRK08652 acetylornithine deace 100.0 1.2E-46 2.6E-51 383.2 36.5 338 98-476 2-346 (347)
33 PRK07079 hypothetical protein; 100.0 7.4E-46 1.6E-50 392.1 40.7 381 78-478 1-458 (469)
34 PRK13007 succinyl-diaminopimel 100.0 4.9E-46 1.1E-50 379.6 35.8 334 96-471 5-351 (352)
35 TIGR01883 PepT-like peptidase 100.0 6.7E-46 1.5E-50 380.0 36.1 339 100-471 2-360 (361)
36 TIGR01886 dipeptidase dipeptid 100.0 4.9E-46 1.1E-50 392.3 35.9 362 87-476 4-466 (466)
37 PRK04443 acetyl-lysine deacety 100.0 1.1E-45 2.4E-50 376.5 35.3 336 96-474 4-348 (348)
38 PRK13381 peptidase T; Provisio 100.0 3.7E-45 8.1E-50 379.9 38.4 350 99-475 2-403 (404)
39 TIGR01900 dapE-gram_pos succin 100.0 5.8E-45 1.3E-49 374.3 36.0 333 103-456 1-373 (373)
40 PRK07906 hypothetical protein; 100.0 3.4E-45 7.4E-50 382.8 34.4 356 101-473 2-425 (426)
41 PRK08737 acetylornithine deace 100.0 1.1E-44 2.3E-49 370.7 36.6 339 95-472 3-362 (364)
42 COG0624 ArgE Acetylornithine d 100.0 1.5E-44 3.2E-49 376.1 38.1 367 94-476 9-408 (409)
43 PRK12892 allantoate amidohydro 100.0 3E-44 6.4E-49 374.2 37.9 346 97-476 9-411 (412)
44 PRK05469 peptidase T; Provisio 100.0 2.3E-44 5.1E-49 374.4 37.0 353 98-477 2-407 (408)
45 PRK07318 dipeptidase PepV; Rev 100.0 1.5E-44 3.3E-49 381.7 34.5 361 87-476 5-466 (466)
46 KOG2276 Metalloexopeptidases [ 100.0 6.7E-44 1.5E-48 347.1 32.4 377 84-476 4-472 (473)
47 PRK07205 hypothetical protein; 100.0 1.8E-43 3.9E-48 371.5 36.6 357 94-477 7-444 (444)
48 TIGR01902 dapE-lys-deAc N-acet 100.0 2.1E-43 4.5E-48 358.1 34.6 328 102-477 1-336 (336)
49 PRK09290 allantoate amidohydro 100.0 1.2E-42 2.6E-47 362.1 38.3 345 97-477 6-412 (413)
50 PRK12893 allantoate amidohydro 100.0 2.5E-42 5.4E-47 359.7 40.1 345 97-477 9-411 (412)
51 PRK06156 hypothetical protein; 100.0 7E-42 1.5E-46 365.2 37.0 360 94-476 42-516 (520)
52 PRK12891 allantoate amidohydro 100.0 1.1E-40 2.4E-45 347.2 40.8 345 99-477 11-411 (414)
53 TIGR01882 peptidase-T peptidas 100.0 2.2E-41 4.8E-46 352.0 35.1 351 98-475 3-407 (410)
54 TIGR01893 aa-his-dipept aminoa 100.0 3.5E-41 7.5E-46 357.0 36.0 351 97-474 3-476 (477)
55 PRK12890 allantoate amidohydro 100.0 2.5E-40 5.3E-45 344.9 40.6 330 109-476 29-412 (414)
56 TIGR01879 hydantase amidase, h 100.0 8.5E-40 1.9E-44 339.3 37.6 329 112-474 25-401 (401)
57 TIGR01887 dipeptidaselike dipe 100.0 3.8E-40 8.3E-45 345.2 34.7 347 98-471 2-447 (447)
58 PRK15026 aminoacyl-histidine d 100.0 1.9E-39 4.2E-44 341.9 37.0 344 97-474 9-482 (485)
59 PRK08554 peptidase; Reviewed 100.0 2.9E-39 6.3E-44 337.9 34.3 357 99-476 2-438 (438)
60 KOG2275 Aminoacylase ACY1 and 100.0 6.9E-38 1.5E-42 308.5 32.3 363 97-474 24-417 (420)
61 PRK13799 unknown domain/N-carb 100.0 3.6E-37 7.7E-42 332.3 40.9 348 94-476 177-590 (591)
62 TIGR03176 AllC allantoate amid 100.0 3.3E-37 7.1E-42 319.8 38.6 346 98-477 3-405 (406)
63 PRK13590 putative bifunctional 100.0 1.4E-36 2.9E-41 328.1 41.6 346 95-477 178-589 (591)
64 COG2195 PepD Di- and tripeptid 99.9 5.3E-23 1.1E-27 209.3 19.6 351 96-474 3-411 (414)
65 PF01546 Peptidase_M20: Peptid 99.9 7.4E-22 1.6E-26 183.1 12.2 175 157-472 1-188 (189)
66 PF07687 M20_dimer: Peptidase 99.7 4E-16 8.6E-21 132.0 12.3 101 266-366 5-110 (111)
67 COG4187 RocB Arginine degradat 99.7 2.2E-15 4.7E-20 149.5 17.4 259 97-361 7-323 (553)
68 TIGR03106 trio_M42_hydro hydro 99.6 9.2E-14 2E-18 140.4 23.9 129 97-226 2-222 (343)
69 PRK09961 exoaminopeptidase; Pr 99.5 5.5E-13 1.2E-17 135.1 20.9 249 101-474 3-333 (344)
70 PRK10199 alkaline phosphatase 99.4 1.4E-12 2.9E-17 130.3 14.9 122 107-233 44-188 (346)
71 COG1363 FrvX Cellulase M and r 99.3 3E-10 6.4E-15 113.9 23.0 144 98-247 2-236 (355)
72 PRK09864 putative peptidase; P 99.3 4.6E-10 1E-14 113.4 24.1 247 101-474 3-341 (356)
73 TIGR03107 glu_aminopep glutamy 99.3 2.1E-10 4.7E-15 116.0 19.1 311 102-474 2-341 (350)
74 KOG2194 Aminopeptidases of the 98.0 3.3E-05 7.1E-10 84.4 10.8 135 97-246 56-224 (834)
75 PF04389 Peptidase_M28: Peptid 97.9 2.5E-05 5.3E-10 71.8 6.2 82 155-247 2-89 (179)
76 KOG3946 Glutaminyl cyclase [Po 96.6 0.035 7.6E-07 53.4 12.1 127 85-223 38-181 (338)
77 COG2234 Iap Predicted aminopep 95.6 0.04 8.6E-07 58.0 8.2 64 153-235 208-275 (435)
78 PF05343 Peptidase_M42: M42 gl 95.4 0.042 9E-07 54.6 6.9 64 179-247 124-190 (292)
79 KOG2195 Transferrin receptor a 94.9 0.068 1.5E-06 58.9 7.6 76 142-233 339-420 (702)
80 TIGR03107 glu_aminopep glutamy 94.5 0.11 2.4E-06 53.0 7.4 64 181-249 170-236 (350)
81 KOG2526 Predicted aminopeptida 94.2 0.41 8.9E-06 48.9 10.4 112 123-247 166-305 (555)
82 PF05450 Nicastrin: Nicastrin; 93.3 0.48 1E-05 45.5 9.0 66 154-232 1-73 (234)
83 cd00433 Peptidase_M17 Cytosol 90.0 9.7 0.00021 40.5 15.1 125 96-222 152-295 (468)
84 PRK00913 multifunctional amino 89.8 7.3 0.00016 41.5 14.0 123 96-222 169-309 (483)
85 PF05343 Peptidase_M42: M42 gl 87.7 0.43 9.4E-06 47.4 3.0 69 388-466 221-292 (292)
86 PTZ00412 leucyl aminopeptidase 86.4 24 0.00051 38.1 15.0 122 96-222 210-354 (569)
87 PRK05015 aminopeptidase B; Pro 81.7 40 0.00086 35.2 14.0 122 97-223 99-247 (424)
88 KOG2597 Predicted aminopeptida 78.1 23 0.00051 37.6 11.1 128 95-224 186-332 (513)
89 PTZ00371 aspartyl aminopeptida 77.1 7.1 0.00015 41.5 7.2 79 388-475 373-456 (465)
90 PF00883 Peptidase_M17: Cytoso 75.6 5.8 0.00012 39.6 5.7 110 101-222 1-140 (311)
91 COG0260 PepB Leucyl aminopepti 73.0 63 0.0014 34.5 12.9 122 96-222 165-308 (485)
92 PRK02813 putative aminopeptida 70.6 9.4 0.0002 40.1 6.2 75 388-471 346-425 (428)
93 PRK02256 putative aminopeptida 62.9 14 0.00031 39.2 5.7 76 388-472 380-460 (462)
94 KOG3566 Glycosylphosphatidylin 61.2 82 0.0018 34.0 10.7 89 123-233 93-193 (617)
95 cd06406 PB1_P67 A PB1 domain i 49.1 89 0.0019 24.6 6.6 60 334-398 8-67 (80)
96 COG4882 Predicted aminopeptida 47.1 42 0.00091 34.1 5.6 63 142-225 179-241 (486)
97 PF06675 DUF1177: Protein of u 39.8 3.4E+02 0.0074 26.3 10.2 87 152-248 30-131 (276)
98 PRK02256 putative aminopeptida 36.1 55 0.0012 34.8 4.9 41 181-225 252-294 (462)
99 PRK06156 hypothetical protein; 35.0 2.2E+02 0.0047 30.7 9.5 25 316-340 240-264 (520)
100 KOG3430 Dynein light chain typ 35.0 75 0.0016 25.5 4.3 36 94-131 15-50 (90)
101 PF01221 Dynein_light: Dynein 31.4 72 0.0016 25.4 3.9 34 95-131 16-49 (89)
102 cd06408 PB1_NoxR The PB1 domai 28.6 2.9E+02 0.0062 22.1 6.6 55 339-400 14-68 (86)
103 COG4635 HemG Flavodoxin [Energ 25.5 39 0.00085 30.3 1.4 34 106-139 3-36 (175)
104 COG1152 CdhA CO dehydrogenase/ 25.4 2.9E+02 0.0063 30.1 7.9 81 80-166 154-248 (772)
105 PF12685 SpoIIIAH: SpoIIIAH-li 24.0 1.3E+02 0.0027 27.9 4.6 42 93-134 95-150 (196)
106 PF15643 Tox-PL-2: Papain fold 23.7 1.5E+02 0.0032 24.4 4.3 35 100-136 5-40 (100)
107 PTZ00059 dynein light chain; P 23.5 1.3E+02 0.0029 24.0 4.1 33 96-131 18-50 (90)
108 PF04114 Gaa1: Gaa1-like, GPI 22.7 2.3E+02 0.0051 30.5 6.9 72 141-233 3-77 (504)
109 PTZ00371 aspartyl aminopeptida 20.6 1.7E+02 0.0036 31.2 5.2 46 180-225 242-290 (465)
110 PLN03058 dynein light chain ty 20.3 1.7E+02 0.0038 25.2 4.3 36 96-131 47-82 (128)
111 PRK02813 putative aminopeptida 20.3 1.4E+02 0.0031 31.4 4.6 42 181-225 226-267 (428)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=1.4e-64 Score=531.19 Aligned_cols=417 Identities=82% Similarity=1.295 Sum_probs=363.7
Q ss_pred cccCCCCC-CCCc-ccccccchhhHHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC
Q 011407 62 VKNRSSTS-RKPY-SSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL 139 (486)
Q Consensus 62 ~~~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~ 139 (486)
.+||+.+. .++. +.|+||...|+++|.-...+++..+++.++.|.++++|+++++|.++++||+++|+++||+++...
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~ 138 (478)
T PLN02280 59 KKNQSSGLPAKPSSDECEVWTKACSEAVLRLAYQPDTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPL 138 (478)
T ss_pred cccccCCCCCCCCCchhhHhhhhhhHHHHHhhhhHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecC
Confidence 34555543 3455 699999999999988776668889999999999999999999999999999999999999988766
Q ss_pred CCceEEEEEcCCCCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeec
Q 011407 140 AKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQP 219 (486)
Q Consensus 140 ~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~ 219 (486)
.++|+++++|++++|+|+|+||+||||+++...|+|+|+++|++||||++++++++++++++|++.+.+++++|.|+|++
T Consensus 139 ~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~p 218 (478)
T PLN02280 139 AKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQP 218 (478)
T ss_pred CCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecc
Confidence 68899999965445899999999999998888899999999999999999999999999999998887889999999999
Q ss_pred CCCCcCcHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHH
Q 011407 220 AEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVI 299 (486)
Q Consensus 220 dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~ 299 (486)
|||.|.|++.|+++|.++++|++++.|+.+.+|.+.++.+.+..++|..+++|+++|+++|++.|+.|+||+..+++++.
T Consensus 219 dEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~ 298 (478)
T PLN02280 219 AEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVI 298 (478)
T ss_pred cccccchHHHHHHCCCCcCCCEEEEEecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHH
Confidence 99997799999999999889999999987777888777777777779999999999999999999999999999999999
Q ss_pred HHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCC
Q 011407 300 SLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKG 379 (486)
Q Consensus 300 ~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~ 379 (486)
+|+++..+...+....+++++.|+||.+.|+||++|++.+|+|++|+++.+++.++|+++++..+..+++++++++....
T Consensus 299 ~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~ 378 (478)
T PLN02280 299 SLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQ 378 (478)
T ss_pred HHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccc
Confidence 99988655555556678999999999999999999999999999999999999999999999988888888887763211
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCc
Q 011407 380 NTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDV 459 (486)
Q Consensus 380 ~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~ 459 (486)
...++++.+++++++.++++..+++|.+......+..|++|+++|.+.+|++++++|+++..++....+|+++|++++++
T Consensus 379 ~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~ 458 (478)
T PLN02280 379 NTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDV 458 (478)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHH
Confidence 24577888899999999999988777653222345688999999998899998888987643333457999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhc
Q 011407 460 LPVGAAVHATIAERFLNEY 478 (486)
Q Consensus 460 l~~~~~i~~~~i~~~l~~~ 478 (486)
|..++++|+.++.+|+.+|
T Consensus 459 L~~~~~~~~~~~~~~l~~~ 477 (478)
T PLN02280 459 LPIGAAVHAAIAERYLIEH 477 (478)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999865
No 2
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=3.8e-59 Score=486.92 Aligned_cols=391 Identities=57% Similarity=0.965 Sum_probs=337.5
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccC
Q 011407 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMD 163 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~D 163 (486)
++.+++....++..+++++++++||++||+|++|.++++||+++|+++||+++...+++|++|+++++++|+|+|+||+|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h~D 112 (437)
T PLN02693 33 QINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRADMD 112 (437)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEeecC
Confidence 33444444212367889999999999999999999999999999999999987645689999999655579999999999
Q ss_pred cccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcCcHHHHHHcCCCccccEEE
Q 011407 164 ALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIF 243 (486)
Q Consensus 164 tVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i 243 (486)
|||+++...|+|+|..+|++||||++++++++++|+++|++.+..++++|.|+|++|||.++|++.|+++|.+++.|+++
T Consensus 113 aVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~ii 192 (437)
T PLN02693 113 ALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIF 192 (437)
T ss_pred CCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEE
Confidence 99998888899999889999999999999999999999998877789999999999999656999999999887788888
Q ss_pred EEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEe
Q 011407 244 AVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFN 323 (486)
Q Consensus 244 ~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~ 323 (486)
..|..+..+.|.+..+.|..++|..+++|+++|+++|++.|+.|+|||..+++++.+|+++..+...+....+++++.|+
T Consensus 193 g~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~ 272 (437)
T PLN02693 193 GIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN 272 (437)
T ss_pred EEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEE
Confidence 88877777788877777887789999999999999999999999999999999999999986555555566889999999
Q ss_pred cCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 011407 324 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDL 403 (486)
Q Consensus 324 gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~ 403 (486)
||.+.|+||++|++++|+|+.|.+ +++.++|+++++..+..+++++++++.....++++++.+|+++++.++++++++
T Consensus 273 GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~ 350 (437)
T PLN02693 273 GGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDL 350 (437)
T ss_pred cCCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHh
Confidence 999999999999999999999974 589999999999988778888887764211245667778999999999999998
Q ss_pred cCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 404 LGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 404 ~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
+|.++........|++|+++|++.+|++++++|+++...+ ....|+++|+++.+.+..++++|+.++.++|+.
T Consensus 351 ~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~~~-~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~ 423 (437)
T PLN02693 351 LGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHATMAVQYLKE 423 (437)
T ss_pred cCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCCCC-CCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 8976542234567999999999999999999999853211 136999999999999999999999999999886
No 3
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=1.2e-56 Score=455.02 Aligned_cols=378 Identities=40% Similarity=0.642 Sum_probs=346.6
Q ss_pred chHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCC-CceEEEEEcCC-CCcEEEEEeccCcccCcCCCC
Q 011407 95 ETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLA-KTGIRAWVGTG-GPPFVALRADMDALPIQEAVE 172 (486)
Q Consensus 95 ~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~-~~nvia~~g~~-~~~~ill~gH~DtVP~~~~~~ 172 (486)
+++++++++.|+||++|+++++|.++++||+++|+++||++....+ ++++++.++++ ++|+|+|.+.||.+|..++++
T Consensus 9 ~~~~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALPi~E~t~ 88 (392)
T COG1473 9 ELKDELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALPIQEETG 88 (392)
T ss_pred hhhHHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCccccccC
Confidence 4689999999999999999999999999999999999999554443 79999999655 668999999999999999999
Q ss_pred CcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcCcHHHHHHcCCCcc-ccEEEEEecCCCC
Q 011407 173 WEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALED-VEAIFAVHVSHEH 251 (486)
Q Consensus 173 ~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~-~d~~i~~~~~~~~ 251 (486)
.||.++.+|++|+||||++.+++|+++++|++...+++++|.|+|+|.||.++|++.|+++|.+++ +|+++.+|+.++.
T Consensus 89 ~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p~~ 168 (392)
T COG1473 89 LPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGPGL 168 (392)
T ss_pred CCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCCCC
Confidence 999999999999999999999999999999998778999999999999999989999999999999 9999999998877
Q ss_pred CceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccc
Q 011407 252 PTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMI 331 (486)
Q Consensus 252 p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvI 331 (486)
|.|.+.++.|..+++...++|+++|+++|++.||.|+||+.+++.++..|+.+..|..+|....+++++.++||.+.|||
T Consensus 169 ~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~NVI 248 (392)
T COG1473 169 PVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAANVI 248 (392)
T ss_pred CCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCCcC
Confidence 99999999999888999999999999999999999999999999999999999988888888899999999999999999
Q ss_pred cCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCccc-
Q 011407 332 PDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYR- 410 (486)
Q Consensus 332 P~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~- 410 (486)
|+.+++.+++|+...+..+++.++|+++++.++..+|+++++++. ..||++.+|..+.+.+++++++..|.+...
T Consensus 249 pd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~~----~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~~~ 324 (392)
T COG1473 249 PDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDYE----RGYPPVVNDPALTDLLAEAAEEVGGEEVVVV 324 (392)
T ss_pred CCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEec----CCCCCccCCHHHHHHHHHHHHHhccccceec
Confidence 999999999999999999999999999999999999999999987 578889999999999999999987754322
Q ss_pred -ccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 411 -VVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 411 -~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
....+.|++||++|++.+|..++++|.+....+ ....|++.+.++.+.+..+++++..++..++..
T Consensus 325 ~~~~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~~~-~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~~ 391 (392)
T COG1473 325 ELPPSMAGSEDFGYYLEKVPGAFFFLGTGSADGG-TYPLHHPKFDFDEAALATGVKLLAALALLYLAK 391 (392)
T ss_pred ccCCCCCccchHHHHHHhCCeeEEEeecCcCCCC-cccccCCcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 223456999999999999999999998765311 235999999999999999999999999998764
No 4
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=3.3e-54 Score=450.36 Aligned_cols=376 Identities=17% Similarity=0.235 Sum_probs=308.7
Q ss_pred hhhHHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEec--------------------CC
Q 011407 81 RACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--------------------LA 140 (486)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--------------------~~ 140 (486)
.+.++.+.+++ ++.++++++++++|++|||+|++|.++++||+++|+++|++++.. .+
T Consensus 2 ~~~~~~~~~~~--~~~~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (422)
T PRK06915 2 EQLKKQICDYI--ESHEEEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSD 79 (422)
T ss_pred cHHHHHHHHHH--HhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCC
Confidence 45578899999 999999999999999999999999999999999999999997532 24
Q ss_pred CceEEEEEcC-CCCcEEEEEeccCcccCcCCCCC---cccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCce
Q 011407 141 KTGIRAWVGT-GGPPFVALRADMDALPIQEAVEW---EYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGT 212 (486)
Q Consensus 141 ~~nvia~~g~-~~~~~ill~gH~DtVP~~~~~~~---p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~ 212 (486)
++||++++++ +++|+|+|+|||||||+++.+.| ||.+ +++|++||||+ | |+++++|.|+++|++.+.+++++
T Consensus 80 ~~nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~ 159 (422)
T PRK06915 80 SPNIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGD 159 (422)
T ss_pred CceEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCc
Confidence 6899999943 45689999999999999776666 7776 46899999999 4 77778899999999988889999
Q ss_pred EEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHH
Q 011407 213 VILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPV 291 (486)
Q Consensus 213 I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi 291 (486)
|.|+|++|||+|+ |+..++.+++ +.|++++.+|+.. .+ ..+. .|..+++|+++|+++|+|.|+.|+||+
T Consensus 160 v~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~ep~~~----~i--~~~~--~G~~~~~i~v~G~~~H~s~p~~g~nAi 229 (422)
T PRK06915 160 VIFQSVIEEESGGAGTLAAILRGY--KADGAIIPEPTNM----KF--FPKQ--QGSMWFRLHVKGKAAHGGTRYEGVSAI 229 (422)
T ss_pred EEEEEecccccCCcchHHHHhcCc--CCCEEEECCCCCc----cc--eeec--ccEEEEEEEEEeeccccCCCCcCcCHH
Confidence 9999999999887 8888888764 5799997654321 12 1222 388999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhc----ccCCC-----CCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHH
Q 011407 292 LAASAAVISLQGLVSR----EANPL-----DSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE 362 (486)
Q Consensus 292 ~~a~~~i~~L~~l~~~----~~~~~-----~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~ 362 (486)
..+++++.+|+++..+ ...+. ...++|++.|+||.+.|+||+.|++.+|+|+.|+++.+++.++|++.+++
T Consensus 230 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~ 309 (422)
T PRK06915 230 EKSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAE 309 (422)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 9999999999887532 11111 13589999999999999999999999999999999999999999999988
Q ss_pred HHhhc----CceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh--cCccEEEEc
Q 011407 363 QARVF----RCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV--VPAAFYYIG 436 (486)
Q Consensus 363 ~~~~~----g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~G 436 (486)
.+... +..+++++.... ....+...|+++++.+++++++++|.++. ....++++|+++|.+. +|+++ +|
T Consensus 310 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~g~tD~~~~~~~~giP~v~--fG 384 (422)
T PRK06915 310 LNDVDEWFVEHPVEVEWFGAR-WVPGELEENHPLMTTLEHNFVEIEGNKPI--IEASPWGTDGGLLTQIAGVPTIV--FG 384 (422)
T ss_pred HhccChhhhcCCceEEeeccc-CCcccCCCCCHHHHHHHHHHHHHhCCCCe--eceeeeeccHHHHhccCCCCEEE--EC
Confidence 76432 233455443211 11224456899999999999998888663 3566789999999874 88854 68
Q ss_pred cccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhc
Q 011407 437 IKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 478 (486)
Q Consensus 437 ~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~ 478 (486)
|+.. ..+|++||+++++++..++++|+.++.++|+-+
T Consensus 385 pg~~-----~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~~ 421 (422)
T PRK06915 385 PGET-----KVAHYPNEYIEVDKMIAAAKIIALTLLDWCEVK 421 (422)
T ss_pred CCCc-----cccCCCCceeEHHHHHHHHHHHHHHHHHHhCCC
Confidence 8753 369999999999999999999999999998753
No 5
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.4e-53 Score=439.23 Aligned_cols=359 Identities=21% Similarity=0.283 Sum_probs=299.2
Q ss_pred HHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEec---CCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCC-
Q 011407 98 DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP---LAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEW- 173 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~---~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~- 173 (486)
+++++++++|++|||+|++|.++++||+++|+++||+++.. ++++|++++++++ +|+|+|+||+||||+++.+.|
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~-~~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSG-SPVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCC-CceEEEEeeecccCCCCcccCc
Confidence 57889999999999999999999999999999999998753 3578999999654 489999999999998766666
Q ss_pred --cccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEe
Q 011407 174 --EYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVH 246 (486)
Q Consensus 174 --p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~ 246 (486)
||.+ +++|++||||+ | |++++++.|+++|++.+..++++|.|+|++|||.|+ |++.+++++.++++|++++.+
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 6665 57899999999 4 888999999999999888889999999999999986 999999998887889998777
Q ss_pred cCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc---cCCCCCeEEEEEEEe
Q 011407 247 VSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE---ANPLDSQVVSVTYFN 323 (486)
Q Consensus 247 ~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~---~~~~~~~~~~v~~i~ 323 (486)
++. ..+.+ +. .|..+++|+++|+++|++.|+.|+|||..+++++..|+++..+. ....+..+++++.|+
T Consensus 161 p~~----~~i~~--~~--~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 PSG----HGIVY--AH--KGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred CCC----ceeEE--EE--EEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 542 11211 22 27889999999999999999999999999999999998875332 122346789999999
Q ss_pred cCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCC--CCCHHHHHHHHHHHH
Q 011407 324 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPT--VNDEDMYEHVKKVAI 401 (486)
Q Consensus 324 gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~--~~d~~~v~~l~~a~~ 401 (486)
||...|+||++|++++|+|+.|+++.+++.++|++++++.....++++++++.. .+++. ..++++++.++++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~l~~~~~~~~~ 308 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIYS----NHRPVASDKDSKLVQLAKDVAK 308 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEec----CCCCcCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998766556677777652 23333 347899999999999
Q ss_pred HhcCCCcccccCCCcccchHHHHHhhcCc-cEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 402 DLLGPMNYRVVPPMMGAEDFSFYSEVVPA-AFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 402 ~~~G~~~~~~~~~~~g~tD~~~~~~~~p~-~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+++|.++ .....+|++|++++....|. .++.+||++. ..+|++||+++++++.+++++|..++.++|+
T Consensus 309 ~~~g~~~--~~~~~~g~tD~~~~~~~~~~ip~i~~Gpg~~-----~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 377 (377)
T PRK08588 309 SYVGQDI--PLSAIPGATDASSFLKKKPDFPVIIFGPGNN-----LTAHQVDEYVEKDMYLKFIDIYKEIIIQYLK 377 (377)
T ss_pred HhhCCCC--ceecCCCcccHHHHhhhcCCCCEEEECCCCC-----ccCCCCCceeEHHHHHHHHHHHHHHHHHHhC
Confidence 9888754 24567899999998754332 1335798843 3699999999999999999999999999874
No 6
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.1e-52 Score=436.19 Aligned_cols=371 Identities=14% Similarity=0.118 Sum_probs=299.3
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhhCCCCC--C-ChHHHHHHHHHHHHhCCCceEecC-----C------CceEEEEEcC-
Q 011407 86 EVMELARRPETVDWLKSVRRTIHQNPELA--F-QEFETSRLLRAELDRMEIGYKYPL-----A------KTGIRAWVGT- 150 (486)
Q Consensus 86 ~i~~~~~~~~~~~~l~~ll~~lv~iPs~s--~-~E~~~a~~l~~~L~~~G~~v~~~~-----~------~~nvia~~g~- 150 (486)
.|.+++ +++++++++++++|++|||++ + +|.++++||+++|+++||+++... + ++|+++++++
T Consensus 4 ~~~~~~--~~~~~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~ 81 (427)
T PRK13013 4 RLFAAI--EARRDDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGA 81 (427)
T ss_pred HHHHHH--HHhHHHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCC
Confidence 577888 888999999999999999997 3 568999999999999999987532 1 5699999943
Q ss_pred CCCcEEEEEeccCcccCcC-CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC
Q 011407 151 GGPPFVALRADMDALPIQE-AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN 225 (486)
Q Consensus 151 ~~~~~ill~gH~DtVP~~~-~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~ 225 (486)
+++|+|+|+||+||||+++ |+.+||.+ ++||++||||+. |+++++|+|+++|++.+.+++++|.|+|++|||.|+
T Consensus 82 ~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~ 161 (427)
T PRK13013 82 RDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGG 161 (427)
T ss_pred CCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCC
Confidence 3468999999999999864 35568887 568999999994 999999999999999888889999999999999875
Q ss_pred --cHHHHHHcCCCc--cccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHH
Q 011407 226 --GAKRMMADGALE--DVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISL 301 (486)
Q Consensus 226 --G~~~l~~~g~~~--~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L 301 (486)
|...+++++.++ ++|++++.+++.. ..+. .+. .|..+++|+++|+++|++.|+.|+||+..++++|.+|
T Consensus 162 ~~g~~~l~~~~~~~~~~~d~~i~~ep~~~---~~i~--~~~--~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l 234 (427)
T PRK13013 162 FGGVAYLAEQGRFSPDRVQHVIIPEPLNK---DRIC--LGH--RGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEI 234 (427)
T ss_pred hhHHHHHHhcCCccccCCCEEEEecCCCC---CceE--Eee--eeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHH
Confidence 778888888765 5699997775421 1122 222 2888999999999999999999999999999999999
Q ss_pred Hhhhhc-----cc-CC-----CCCeEEEEEEEecCccC----------ccccCeEEEEEEEeCCChhhHHHHHHHHHHHH
Q 011407 302 QGLVSR-----EA-NP-----LDSQVVSVTYFNGGDHL----------DMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVI 360 (486)
Q Consensus 302 ~~l~~~-----~~-~~-----~~~~~~~v~~i~gG~~~----------nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~ 360 (486)
++...+ .. .+ ....++|++.|+||... |+||++|++++|+|++|+++.+++.++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i 314 (427)
T PRK13013 235 EERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALL 314 (427)
T ss_pred HHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 765311 00 01 12468999999999766 99999999999999999999999999999999
Q ss_pred HHHHhhc-CceeEEEEecCCCCCCCCC--CCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh--cCccEEEE
Q 011407 361 VEQARVF-RCSATVDFFDKGNTVYPPT--VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV--VPAAFYYI 435 (486)
Q Consensus 361 ~~~~~~~-g~~~~v~~~~~~~~~~~~~--~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~ 435 (486)
++.+... +++++++.. ..+++. ..++++++.+.+++++.+|.++. ....++++|++++.+. +|.++ .+
T Consensus 315 ~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~lv~~l~~a~~~~~g~~~~--~~~~~g~~D~~~~~~~g~~~~~v-~f 387 (427)
T PRK13013 315 ERLKRARPGFAYEIRDL----FEVLPTMTDRDAPVVRSVAAAIERVLGRQAD--YVVSPGTYDQKHIDRIGKLKNCI-AY 387 (427)
T ss_pred HHHHhhCCCceeEEEEc----ccCCcccCCCCCHHHHHHHHHHHHhhCCCCc--eeecCccCCHHHHHhcCCCCCEE-EE
Confidence 9876533 445555443 123333 34679999999999998887653 3456788999999874 34333 57
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 436 GIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 436 G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
||+.. ..+|++|||+++++|.+++++|+.++.+|++-
T Consensus 388 GPg~~-----~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~~ 424 (427)
T PRK13013 388 GPGIL-----DLAHQPDEWVGIADMVDSAKVMALVLADLLAG 424 (427)
T ss_pred CCCCc-----cccCCCCceeEHHHHHHHHHHHHHHHHHHhcc
Confidence 88754 36999999999999999999999999999863
No 7
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=7.5e-52 Score=424.26 Aligned_cols=356 Identities=42% Similarity=0.705 Sum_probs=300.0
Q ss_pred HHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEe-cCCCceEEEEEcCC-CCcEEEEEeccCcccCcCCCCCccccc
Q 011407 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKY-PLAKTGIRAWVGTG-GPPFVALRADMDALPIQEAVEWEYKSK 178 (486)
Q Consensus 101 ~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~-~~~~~nvia~~g~~-~~~~ill~gH~DtVP~~~~~~~p~~~~ 178 (486)
++++++|++|||+|++|.++++||.++|+++|++++. .....|++++++++ ++|+|+|+||+||||++++..+||.++
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 6889999999999999999999999999999999886 34568999999654 468999999999999987777899887
Q ss_pred CCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcCcHHHHHHcCCCccccEEEEEecCCCCCceeEEe
Q 011407 179 VAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGS 258 (486)
Q Consensus 179 ~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~ 258 (486)
++|++||||+++.++++++|++.|++.+..++++|.|+|++|||.+.|+..+++++.++++|++++.|+.+..+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999889999999999998777788999999999999977999999988887889999999876667776555
Q ss_pred ccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEE
Q 011407 259 RPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIG 338 (486)
Q Consensus 259 ~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~ 338 (486)
..+...+|..+++|+++|+++|++.|+.|+||+..|++++.+++++..+...+....+++++.|+||.+.|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 55555568889999999999999889999999999999999998864332223334689999999999999999999999
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCccc-ccCCCcc
Q 011407 339 GTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYR-VVPPMMG 417 (486)
Q Consensus 339 ~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~-~~~~~~g 417 (486)
+|+|++|.++.+++.++|++++++.+.+.+.+++++... .+++...++++++.+++++++++|..+.. .+..++|
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~~~----~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~g 317 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNYDR----GLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMG 317 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEec----CCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCcc
Confidence 999999999999999999999999887778888887652 34445568999999999999988854321 2346789
Q ss_pred cchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCch
Q 011407 418 AEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVL 460 (486)
Q Consensus 418 ~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l 460 (486)
++|++++++.+|++++++|..+.+.+.-...|++++..+.+-+
T Consensus 318 g~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 318 SEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred ccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 9999999999999998888775310001368999988876644
No 8
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=7.6e-51 Score=422.44 Aligned_cols=364 Identities=17% Similarity=0.203 Sum_probs=298.1
Q ss_pred hHHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCCh---HHHHHHHHHHHHhCCCceEecC----------C-------Cc
Q 011407 83 CSKEVMELARRPETVDWLKSVRRTIHQNPELAFQE---FETSRLLRAELDRMEIGYKYPL----------A-------KT 142 (486)
Q Consensus 83 ~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E---~~~a~~l~~~L~~~G~~v~~~~----------~-------~~ 142 (486)
...++++++ ++++++++++|++|++|||+|+++ .++++||+++|+++||+++..+ + ++
T Consensus 4 ~~~~~~~~~--~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (402)
T PRK07338 4 EERAVLDLI--DDRQAPMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGP 81 (402)
T ss_pred HHHHHHHHH--hhhHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCC
Confidence 345788889 889999999999999999999775 5799999999999999887431 1 26
Q ss_pred eEEEEEcCCCCcEEEEEeccCcccCcCCCCCcccc---cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEE
Q 011407 143 GIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKS---KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILI 216 (486)
Q Consensus 143 nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p~~~---~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~ 216 (486)
||+++++++.+++|+|+||+||||++. .||.+ +++|++||||+. |+++++|+|+++|++.+.+++++|.|+
T Consensus 82 nl~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~ 158 (402)
T PRK07338 82 ALHVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVL 158 (402)
T ss_pred eEEEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 999999544346899999999999853 78986 578999999984 899999999999998888888999999
Q ss_pred eecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCC-CCCCCcHHHHH
Q 011407 217 FQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN-PHRSVDPVLAA 294 (486)
Q Consensus 217 ~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~-p~~G~nAi~~a 294 (486)
|++|||.|+ |++.+++++. .+.|++++.+++. +.+.+.. +. .|..+++|+++|+++|++. |+.|+||+..+
T Consensus 159 ~~~dEE~g~~g~~~~~~~~~-~~~~~~i~~ep~~--~~~~v~~--~~--kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~ 231 (402)
T PRK07338 159 INPDEEIGSPASAPLLAELA-RGKHAALTYEPAL--PDGTLAG--AR--KGSGNFTIVVTGRAAHAGRAFDEGRNAIVAA 231 (402)
T ss_pred EECCcccCChhhHHHHHHHh-ccCcEEEEecCCC--CCCcEEe--ec--ceeEEEEEEEEeEcccCCCCcccCccHHHHH
Confidence 999999987 9998888753 3578888887642 2333322 11 2788999999999999996 99999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEE
Q 011407 295 SAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVD 374 (486)
Q Consensus 295 ~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~ 374 (486)
++++.+|+++..+. ...+++++.|+||.+.|+||++|++++|+|+.|+++.+++.++|++++++.+...+++++++
T Consensus 232 ~~~i~~l~~l~~~~----~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 307 (402)
T PRK07338 232 AELALALHALNGQR----DGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLH 307 (402)
T ss_pred HHHHHHHHhhhccC----CCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEE
Confidence 99999998874321 34689999999999999999999999999999999999999999999998765556665554
Q ss_pred EecCCCCCCCCCC---CCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCC
Q 011407 375 FFDKGNTVYPPTV---NDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHS 450 (486)
Q Consensus 375 ~~~~~~~~~~~~~---~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~ 450 (486)
.. ..+++.. .++++++.++++.++ +|.++. ...++|++|++++... +|++. ++||+.. .+|+
T Consensus 308 ~~----~~~~p~~~~~~~~~l~~~~~~~~~~-~g~~~~--~~~~~g~tDa~~~~~~giP~v~-~~Gpg~~------~~H~ 373 (402)
T PRK07338 308 GG----FGRPPKPIDAAQQRLFEAVQACGAA-LGLTID--WKDSGGVCDGNNLAAAGLPVVD-TLGVRGG------NIHS 373 (402)
T ss_pred cc----ccCCCCCCCcchHHHHHHHHHHHHH-cCCCcc--cccCCccchHHHHhhcCCCeEe-ccCCCCC------CCCC
Confidence 32 1223322 356899999998877 687652 4567899999998764 88874 4788753 4899
Q ss_pred CCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 451 PYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 451 ~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+|||++++++.+++++|+.++.+|+.
T Consensus 374 ~~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 374 EDEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred ccceEehhhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999864
No 9
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=6.8e-51 Score=425.71 Aligned_cols=374 Identities=14% Similarity=0.086 Sum_probs=305.4
Q ss_pred chhhHHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEec--------------------C
Q 011407 80 SRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--------------------L 139 (486)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--------------------~ 139 (486)
+.++++.+.+++ ++.++++++++++|++|||+|++|.++++||+++|+++|++++.. +
T Consensus 4 ~~~~~~~~~~~i--~~~~~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (427)
T PRK06837 4 TPDLTQRILAAV--DAGFDAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYS 81 (427)
T ss_pred chHHHHHHHHHH--HhhhHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccC
Confidence 455788899999 999999999999999999999999999999999999999987641 2
Q ss_pred CCceEEEEEcC-C-CCcEEEEEeccCcccCcC---CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCC
Q 011407 140 AKTGIRAWVGT-G-GPPFVALRADMDALPIQE---AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLK 210 (486)
Q Consensus 140 ~~~nvia~~g~-~-~~~~ill~gH~DtVP~~~---~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~ 210 (486)
+++||++++++ + .+|+|+|+|||||||+++ |+..||.+ .++|++||||+. |+++++|.|+++|++.+.+++
T Consensus 82 ~~~nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~ 161 (427)
T PRK06837 82 GAPNVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPA 161 (427)
T ss_pred CCceEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCC
Confidence 47899999953 3 368999999999999975 45557777 468999999994 888899999999999888899
Q ss_pred ceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCc
Q 011407 211 GTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVD 289 (486)
Q Consensus 211 ~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~n 289 (486)
++|.|+|++|||.++ |+..++..++ ..|++++.++.. + .+ ..|.+ |..+++|+++|+++|++.|+.|+|
T Consensus 162 ~~i~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~ep~~--~--~i--~~~~~--G~~~~~i~v~G~~~Hs~~p~~g~n 231 (427)
T PRK06837 162 ARVHFQSVIEEESTGNGALSTLQRGY--RADACLIPEPTG--E--KL--VRAQV--GVIWFRLRVRGAPVHVREAGTGAN 231 (427)
T ss_pred CcEEEEEEeccccCCHhHHHHHhcCc--CCCEEEEcCCCC--C--cc--ccccc--eeEEEEEEEEeeccccCCcccCcC
Confidence 999999999999876 8888888765 479998776531 1 12 22332 889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhccc-----C-----CCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHH
Q 011407 290 PVLAASAAVISLQGLVSREA-----N-----PLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEV 359 (486)
Q Consensus 290 Ai~~a~~~i~~L~~l~~~~~-----~-----~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~ 359 (486)
|+..+++++..|+++..... . .....++|++.|+||...|+||++|++.+++|++|+++.+++.++|+++
T Consensus 232 Ai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~ 311 (427)
T PRK06837 232 AIDAAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEAC 311 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHH
Confidence 99999999999987642210 0 1124578999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc----CceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh--hcCccEE
Q 011407 360 IVEQARVF----RCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE--VVPAAFY 433 (486)
Q Consensus 360 ~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~--~~p~~~~ 433 (486)
+++.+... +...++++.... ........++++++.+.+++++.+|.++ .+..++|++|++++.. .+|++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~a~~~~~g~~~--~~~~~~g~tDa~~~~~~~gip~v~- 387 (427)
T PRK06837 312 LAAAARDDRFLSNNPPEVVWSGFL-AEGYVLEPGSEAEAALARAHAAVFGGPL--RSFVTTAYTDTRFYGLYYGIPALC- 387 (427)
T ss_pred HHHHHhcChhhhhCCCeEEEEecc-cCCcCCCCCCHHHHHHHHHHHHHhCCCC--eeeEEeeccchHHHhccCCCCEEE-
Confidence 98765432 223445443111 1223345678999999999999888765 3566789999999874 588764
Q ss_pred EEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 434 YIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 434 ~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+||+.. .+|++||+++++++.+++++|+.++.++|.
T Consensus 388 -~Gp~~~------~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~ 423 (427)
T PRK06837 388 -YGPSGE------GIHGFDERVDLESVRKVTKTIALFVAEWCG 423 (427)
T ss_pred -ECCCCC------ccCCCCceEEHHHHHHHHHHHHHHHHHHhC
Confidence 798753 499999999999999999999999999985
No 10
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=1.8e-50 Score=420.29 Aligned_cols=368 Identities=17% Similarity=0.200 Sum_probs=297.6
Q ss_pred HHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChH---HHHHHHHHHHHhCCCceEecC----CCceEEEEEcCCCCcEEE
Q 011407 85 KEVMELARRPETVDWLKSVRRTIHQNPELAFQEF---ETSRLLRAELDRMEIGYKYPL----AKTGIRAWVGTGGPPFVA 157 (486)
Q Consensus 85 ~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~---~~a~~l~~~L~~~G~~v~~~~----~~~nvia~~g~~~~~~il 157 (486)
+++.+++ +++++++++++++|++|||++++|. ++++||.++|+++|++++... .++|+++++++.++|+|+
T Consensus 26 ~~~~~~~--~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~il 103 (410)
T PRK06133 26 AELLAAA--QQEQPAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRIM 103 (410)
T ss_pred HHHHHHH--HHhHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceEE
Confidence 3588888 8899999999999999999998764 899999999999999987642 357999999543468999
Q ss_pred EEeccCcccCcC-CCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHH
Q 011407 158 LRADMDALPIQE-AVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMA 232 (486)
Q Consensus 158 l~gH~DtVP~~~-~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~ 232 (486)
|+||+||||++. |+..||. .++|++||||+. ++++++|+|++.|++.+.+++++|.|+|++|||.|+ |++.+++
T Consensus 104 l~~H~D~Vp~~~~w~~~Pf~-~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~ 182 (410)
T PRK06133 104 LIAHMDTVYLPGMLAKQPFR-IDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELIA 182 (410)
T ss_pred EEeecCccCCCCccCCCCEE-EECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHHH
Confidence 999999999753 3444665 678999999974 899999999999999888888999999999999886 9999997
Q ss_pred cCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCC-CCCCCCcHHHHHHHHHHHHHhhhhcccCC
Q 011407 233 DGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRSVDPVLAASAAVISLQGLVSREANP 311 (486)
Q Consensus 233 ~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~-~p~~G~nAi~~a~~~i~~L~~l~~~~~~~ 311 (486)
+.. .++|++++.+++. +.+.+.+ +. .|..+++|+++|+++|++ .|+.|+||+..+++++..|+++.. +
T Consensus 183 ~~~-~~~d~~i~~ep~~--~~~~v~~--~~--~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~----~ 251 (410)
T PRK06133 183 ELA-AQHDVVFSCEPGR--AKDALTL--AT--SGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD----P 251 (410)
T ss_pred HHh-ccCCEEEEeCCCC--CCCCEEE--ec--cceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC----C
Confidence 633 4689999888643 2233332 22 278899999999999986 599999999999999999987642 1
Q ss_pred CCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCC---
Q 011407 312 LDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVN--- 388 (486)
Q Consensus 312 ~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~--- 388 (486)
....+++++.++||.+.|+||++|++.+|+|+.|.++.+++.++|++++++ +...++++++++.. .+++...
T Consensus 252 ~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~ 326 (410)
T PRK06133 252 AKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRFER----GRPPLEANAA 326 (410)
T ss_pred CCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEecc----ccCCcccCcc
Confidence 234678999999999999999999999999999999999999999999987 33456677776542 3444332
Q ss_pred CHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHH
Q 011407 389 DEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVH 467 (486)
Q Consensus 389 d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~ 467 (486)
++++++.+++++++ .|.++...+...++++|++++.. .+|++++.+|+.. .++|++||+++++++..++++|
T Consensus 327 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~~~~~~~~~ 399 (410)
T PRK06133 327 SRALAEHAQGIYGE-LGRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG------FGAHSNDEYIELNSIVPRLYLL 399 (410)
T ss_pred hHHHHHHHHHHHHH-cCCCccccccCCCCCchHHHHHhcCCCceEecccCCC------CCCCCCCcEEEcccHHHHHHHH
Confidence 45788888888877 46543211246789999999976 4777765456643 3599999999999999999999
Q ss_pred HHHHHHHHhhc
Q 011407 468 ATIAERFLNEY 478 (486)
Q Consensus 468 ~~~i~~~l~~~ 478 (486)
+.++.+++.++
T Consensus 400 ~~~~~~~~~~~ 410 (410)
T PRK06133 400 TRMIMELSRDK 410 (410)
T ss_pred HHHHHHhhcCC
Confidence 99999998864
No 11
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=4.3e-50 Score=416.29 Aligned_cols=371 Identities=16% Similarity=0.185 Sum_probs=296.2
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccC
Q 011407 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMD 163 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~D 163 (486)
.+++.+++ +++++++++++++|++|||+|++|.+++++|.++|+++||++...+.+.|++++++++ .|+|+|+||+|
T Consensus 3 ~~~~~~~~--~~~~~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~-~~~i~~~~H~D 79 (399)
T PRK13004 3 FKLILMLA--EKYKADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHG-KKLIAFDAHID 79 (399)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCC-CcEEEEEeccC
Confidence 35788899 8899999999999999999999999999999999999999865545567999998655 48999999999
Q ss_pred cccCcCCCCC---cccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc-C-cHHHHHHcC
Q 011407 164 ALPIQEAVEW---EYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG-N-GAKRMMADG 234 (486)
Q Consensus 164 tVP~~~~~~~---p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g-~-G~~~l~~~g 234 (486)
|||+++.+.| ||.+ +++|++||||+ | ++++++|+|++.|++.+..++++|.|+|++|||.+ + |..++++++
T Consensus 80 tVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~ 159 (399)
T PRK13004 80 TVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEED 159 (399)
T ss_pred ccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhc
Confidence 9998765556 4554 46899999999 4 89999999999999998888999999999999975 3 678888875
Q ss_pred CCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhc--ccCCC
Q 011407 235 ALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR--EANPL 312 (486)
Q Consensus 235 ~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~--~~~~~ 312 (486)
.+ ++|++++.+++. ..+.+ +. .|..+++|+++|+++|++.|+.|+||+..+++++..|+.+... .....
T Consensus 160 ~~-~~d~~i~~e~~~----~~i~~--~~--~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~ 230 (399)
T PRK13004 160 KI-KPDFVVITEPTD----LNIYR--GQ--RGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFL 230 (399)
T ss_pred CC-CCCEEEEccCCC----CceEE--ec--ceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcC
Confidence 44 579999877642 12221 22 2888999999999999999999999999999999999887533 22223
Q ss_pred CCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEec---------CCCCC
Q 011407 313 DSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFD---------KGNTV 382 (486)
Q Consensus 313 ~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~---------~~~~~ 382 (486)
+..+++++.|.+| .+.|+||++|++.+|+|++|.++.+++.++|+++... ...+.++++.... +....
T Consensus 231 ~~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~ 308 (399)
T PRK13004 231 GKGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECY 308 (399)
T ss_pred CCceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCccccccccccc
Confidence 4467889988876 4899999999999999999999999999999998432 2223333332110 00012
Q ss_pred CCC--CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh--hcCccEEEEccccCCCCCCCCCCCCCCcCCCC
Q 011407 383 YPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDED 458 (486)
Q Consensus 383 ~~~--~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~ 458 (486)
+|+ ...++++++.+.+++++++|.++. ....++++|.+.+.+ ++|++ .+||+.. ..+|++||+++++
T Consensus 309 ~p~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~~~td~~~~~~~~Gip~v--~~Gpg~~-----~~aH~~nE~i~i~ 379 (399)
T PRK13004 309 FPTWLYPEDHEFVKAAVEAYKGLFGKAPE--VDKWTFSTNGVSIAGRAGIPTI--GFGPGKE-----PLAHAPNEYTWKE 379 (399)
T ss_pred ccccccCCCCHHHHHHHHHHHHHhCCCCe--ecccccccCCeEEehhcCCCEE--EECCCcc-----cccCCCCceeEHH
Confidence 333 345899999999999998887653 345667788777643 47876 4688753 3699999999999
Q ss_pred chHHHHHHHHHHHHHHHhh
Q 011407 459 VLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 459 ~l~~~~~i~~~~i~~~l~~ 477 (486)
++.+++++|+.++.+||++
T Consensus 380 ~l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 380 QLVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999965
No 12
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=4.3e-50 Score=418.92 Aligned_cols=372 Identities=16% Similarity=0.171 Sum_probs=296.5
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhhCCCCC---CChHHHHHHHHHHHHhCCCceEec---CCCceEEEEE-cCCC--CcEE
Q 011407 86 EVMELARRPETVDWLKSVRRTIHQNPELA---FQEFETSRLLRAELDRMEIGYKYP---LAKTGIRAWV-GTGG--PPFV 156 (486)
Q Consensus 86 ~i~~~~~~~~~~~~l~~ll~~lv~iPs~s---~~E~~~a~~l~~~L~~~G~~v~~~---~~~~nvia~~-g~~~--~~~i 156 (486)
.+++++ +...+++++++++|++|||++ ++|.++++||+++|+++||+++.. ++++|+++++ |+++ +|+|
T Consensus 3 ~~~~~i--~~~~~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~l 80 (421)
T PRK08596 3 QLLEQI--ELRKDELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSL 80 (421)
T ss_pred HHHHHH--HhhHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEE
Confidence 477888 888899999999999999999 478899999999999999998753 3578999999 4332 3689
Q ss_pred EEEeccCcccCcCCCCC---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHH
Q 011407 157 ALRADMDALPIQEAVEW---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAK 228 (486)
Q Consensus 157 ll~gH~DtVP~~~~~~~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~ 228 (486)
+|+||+||||+++.+.| ||.+ +++|++||||+. |+++++++|+++|++.+..++++|.|+|++|||.|+ |++
T Consensus 81 ll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~ 160 (421)
T PRK08596 81 IINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTL 160 (421)
T ss_pred EEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHH
Confidence 99999999999775556 5655 468999999993 999999999999999988899999999999999987 999
Q ss_pred HHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEee----------cCCCCCCCCCCcHHHHHHHHH
Q 011407 229 RMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGK----------KGGAANPHRSVDPVLAASAAV 298 (486)
Q Consensus 229 ~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~----------~~Ha~~p~~G~nAi~~a~~~i 298 (486)
++++++. .+|++++.+++... .. |.. |..++.++++|. .+|++.|+.|.||+..+++++
T Consensus 161 ~~~~~~~--~~d~~i~~ep~~~~---~~----~~~--G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i 229 (421)
T PRK08596 161 QCCERGY--DADFAVVVDTSDLH---MQ----GQG--GVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKII 229 (421)
T ss_pred HHHhcCC--CCCEEEECCCCCCc---cc----ccc--ceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHH
Confidence 9999864 47999988864321 11 211 555566677765 479999999999999999999
Q ss_pred HHHHhhhhcc-------cCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhc----
Q 011407 299 ISLQGLVSRE-------ANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVF---- 367 (486)
Q Consensus 299 ~~L~~l~~~~-------~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~---- 367 (486)
.+|+++.... ..+.+..++|++.|+||...|+||++|++++|+|++|+++.+++.++|++++++.+...
T Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~ 309 (421)
T PRK08596 230 QSLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLR 309 (421)
T ss_pred HHHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhh
Confidence 9998764211 11123468999999999999999999999999999999999999999999998754311
Q ss_pred CceeEEEEe-----cCCCCCCCC--CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEcccc
Q 011407 368 RCSATVDFF-----DKGNTVYPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKN 439 (486)
Q Consensus 368 g~~~~v~~~-----~~~~~~~~~--~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~ 439 (486)
...+++++. ......+++ ..+++++++++.+++++++|.++ .+....+++|++++.. .+|++. +||+.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~--~~~~~~g~tD~~~~~~~gip~v~--~Gpg~ 385 (421)
T PRK08596 310 ENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNA--ILDMSTTVTDGGWFAEFGIPAVI--YGPGT 385 (421)
T ss_pred hCCceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCC--eeeEEeeecchhhhhhcCCCEEE--ECCCc
Confidence 011222211 000012333 34689999999999999988765 3455678999999875 488763 68875
Q ss_pred CCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhcc
Q 011407 440 ETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYG 479 (486)
Q Consensus 440 ~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~~ 479 (486)
. ..+|++||+++++++.+++++|+.++.+||+.++
T Consensus 386 ~-----~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~~ 420 (421)
T PRK08596 386 L-----EEAHSVNEKVEIEQLIEYTKVITAFIYEWCHTKK 420 (421)
T ss_pred c-----cccCCCCceEEHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3 4699999999999999999999999999998664
No 13
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-50 Score=416.90 Aligned_cols=364 Identities=19% Similarity=0.228 Sum_probs=291.3
Q ss_pred cchHHHHHHHHHHhhhCCCCCC-----ChHHHHHHHHHHHHhCCCc-eEecC-------C--CceEEEEEcC-CCCcEEE
Q 011407 94 PETVDWLKSVRRTIHQNPELAF-----QEFETSRLLRAELDRMEIG-YKYPL-------A--KTGIRAWVGT-GGPPFVA 157 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~-----~E~~~a~~l~~~L~~~G~~-v~~~~-------~--~~nvia~~g~-~~~~~il 157 (486)
|++++++++++++|++|||+|+ .|.++++||.++|+++||+ ++..+ + ++|+++++++ +++++|+
T Consensus 1 ~~~~~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~ll 80 (400)
T PRK13983 1 DELRDEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLW 80 (400)
T ss_pred CchHHHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEE
Confidence 3567899999999999999984 4899999999999999998 76431 1 5899999954 3457999
Q ss_pred EEeccCcccCcCCCCC---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHH
Q 011407 158 LRADMDALPIQEAVEW---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAK 228 (486)
Q Consensus 158 l~gH~DtVP~~~~~~~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~ 228 (486)
|+||+||||+++.+.| ||.+ +++|++||||+. +++++++.|+++|++.+.+++++|.|+|++|||.|+ |++
T Consensus 81 l~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~ 160 (400)
T PRK13983 81 IISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQ 160 (400)
T ss_pred EEeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHH
Confidence 9999999998765555 6665 468999999974 777788889999999888899999999999999875 899
Q ss_pred HHHHc--CCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHh-hh
Q 011407 229 RMMAD--GALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQG-LV 305 (486)
Q Consensus 229 ~l~~~--g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~-l~ 305 (486)
++++. +.+.+.|++++.+ .+.|++... ..+. .|..+++|+++|+++|+|.|+.|+||+..+++++..|+. +.
T Consensus 161 ~~~~~~~~~~~~~d~~i~~~--~~~~~~~~i-~~~~--~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~ 235 (400)
T PRK13983 161 YLLKKHPELFKKDDLILVPD--AGNPDGSFI-EIAE--KSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALH 235 (400)
T ss_pred HHHhhcccccCCCCEEEEec--CCCCCCcee-EEee--cceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99987 6666678888754 234555421 1222 278899999999999999999999999999999999987 32
Q ss_pred hcc--cCC---CCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCC
Q 011407 306 SRE--ANP---LDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKG 379 (486)
Q Consensus 306 ~~~--~~~---~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~ 379 (486)
... ..+ ....+++++.+.+| ...|+||++|++++|+|++|+++.+++.++|++++++.+...+.+++++....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~- 314 (400)
T PRK13983 236 EKFNAKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQR- 314 (400)
T ss_pred hhhcccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeec-
Confidence 111 111 11245677888877 58999999999999999999999999999999999987766666777765420
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCC
Q 011407 380 NTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDED 458 (486)
Q Consensus 380 ~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~ 458 (486)
....++...++++++.+.+++++++|.++. +..+.|++|..++.. .+|++. +||+.. .+|++||+++++
T Consensus 315 ~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~td~~~~~~~gip~v~--~Gp~~~------~~H~~nE~v~i~ 384 (400)
T PRK13983 315 EQAPPPTPPDSEIVKKLKRAIKEVRGIEPK--VGGIGGGTVAAFLRKKGYPAVV--WSTLDE------TAHQPNEYAKIS 384 (400)
T ss_pred cCCccCCCCCcHHHHHHHHHHHHhcCCCce--eeeecCcHHHHHHHHcCCCEEE--eCCccc------cCCCCCceeeHH
Confidence 122344567899999999999998898764 456788899888865 488765 488753 599999999999
Q ss_pred chHHHHHHHHHHHHH
Q 011407 459 VLPVGAAVHATIAER 473 (486)
Q Consensus 459 ~l~~~~~i~~~~i~~ 473 (486)
++.+++++|..++.+
T Consensus 385 ~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 385 NLIEDAKVFALLLLE 399 (400)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998764
No 14
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=9.1e-50 Score=410.57 Aligned_cols=357 Identities=17% Similarity=0.196 Sum_probs=287.6
Q ss_pred HHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEec--CCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCC---
Q 011407 99 WLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--LAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEW--- 173 (486)
Q Consensus 99 ~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~--- 173 (486)
++++++++|++|||+|++|.++++||.++|+++||+++.. ++++|+++++++ ++|+|+|+||+||||+++.+.|
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 5789999999999999999999999999999999998753 346899999855 3689999999999999765556
Q ss_pred cccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcCC--CccccEEEEE
Q 011407 174 EYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADGA--LEDVEAIFAV 245 (486)
Q Consensus 174 p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g~--~~~~d~~i~~ 245 (486)
||.+ .++|++||||+ | |++++++.|++.+++.+.+++++|.|+|++|||.++ |++.+++... ...+|++++.
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 6666 46899999999 4 889999999999998887889999999999999863 8888875311 1257999888
Q ss_pred ecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhccc-CCCCCeEEEEEEEec
Q 011407 246 HVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA-NPLDSQVVSVTYFNG 324 (486)
Q Consensus 246 ~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~-~~~~~~~~~v~~i~g 324 (486)
+++...+.+. .+..|.. |..+++|+++|+++|++.|+.|+||+..+++++.+|+.+..+.. ..+...+++++.|+|
T Consensus 162 ep~~~~~~~~-~i~~g~~--g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGD-VIKNGRR--GSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCC-eEEEecc--eEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 7653222221 1122322 78899999999999999999999999999999999987642211 223446789999998
Q ss_pred Cc-cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 011407 325 GD-HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDL 403 (486)
Q Consensus 325 G~-~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~ 403 (486)
|. ..|+||++|++.+|+|++|.++.+++.++|++++++ .++++++++.. ...|...+++++++.+.++++++
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~~~---~~~p~~~~~~~~~~~l~~a~~~~ 311 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEWTL---SGEPFLTPPGKLVDAVVAAIEAV 311 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEEec---CCCcccCCCcHHHHHHHHHHHHH
Confidence 86 789999999999999999999999999999999875 35667776542 11222223489999999999998
Q ss_pred cCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 404 LGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 404 ~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+|.++. +...+|++|++++.. .+|++ .+||+.. .+|++||+++++++.+++++|..++.+|+.
T Consensus 312 ~g~~~~--~~~~~g~tda~~~~~~g~p~v--~~Gp~~~------~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 375 (375)
T PRK13009 312 TGITPE--LSTSGGTSDARFIADYGAQVV--EFGPVNA------TIHKVNECVSVADLEKLTRIYERILERLLA 375 (375)
T ss_pred hCCCce--eeccCCCccHHHHHHcCCCeE--EeccCcc------cCCCCCCcEEHHHHHHHHHHHHHHHHHHhC
Confidence 898763 456778899999876 36665 3688753 599999999999999999999999999873
No 15
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=1.1e-49 Score=412.57 Aligned_cols=366 Identities=16% Similarity=0.185 Sum_probs=290.4
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcc
Q 011407 86 EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDAL 165 (486)
Q Consensus 86 ~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtV 165 (486)
.|.+++ +++++++++++++|++|||++++|.++++||.++|+++||++...+...|+++.++++ .|+|+|+||+|||
T Consensus 3 ~~~~~~--~~~~~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtV 79 (395)
T TIGR03526 3 QIKSEA--EKYRGDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHH--HHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeecccc
Confidence 466777 7888999999999999999999999999999999999999853333457999988644 5899999999999
Q ss_pred cCcCCCCC---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc-C-cHHHHHHcCCC
Q 011407 166 PIQEAVEW---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG-N-GAKRMMADGAL 236 (486)
Q Consensus 166 P~~~~~~~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g-~-G~~~l~~~g~~ 236 (486)
|+++.+.| ||.+ +++|++||||+. |+++++|+|++.|++.+..+++++.|++++|||.+ + |...+++++.+
T Consensus 80 p~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03526 80 GIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI 159 (395)
T ss_pred CCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC
Confidence 99876667 4544 468999999983 99999999999999988778889999999999953 3 67777876555
Q ss_pred ccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc-cCC-CCC
Q 011407 237 EDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE-ANP-LDS 314 (486)
Q Consensus 237 ~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~-~~~-~~~ 314 (486)
.+|++++.+++. ..+. .|. .|..+++|+++|+++|++.|+.|+||+..+++++.+|+.+.... ..+ .+.
T Consensus 160 -~~d~~i~~ep~~----~~i~--~g~--~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03526 160 -KPEFVVITEPTD----MNIY--RGQ--RGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEecCCCC----ceEE--EEc--ceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCc
Confidence 479999876532 1222 232 28889999999999999999999999999999999998875321 122 234
Q ss_pred eEEEEEEEecCc-cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCC-----------C
Q 011407 315 QVVSVTYFNGGD-HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNT-----------V 382 (486)
Q Consensus 315 ~~~~v~~i~gG~-~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~-----------~ 382 (486)
.+++++.|.+|. +.|+||++|++++|+|++|+++.+++.++|+++++.. +..+++++.....+ .
T Consensus 231 ~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T TIGR03526 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAEVEMYEYDRPSYTGLVYPTECY 306 (395)
T ss_pred cceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc----CCcceEEEeccccccccccccccccc
Confidence 689999999875 8999999999999999999999999999999987652 22334433210001 1
Q ss_pred CCC--CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHH-HHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCC
Q 011407 383 YPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSF-YSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDED 458 (486)
Q Consensus 383 ~~~--~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~-~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~ 458 (486)
+|+ ...++++++++.+++++++|..+. ....++++|.+. +.+ ++|++ .+||+.. .++|++||+++++
T Consensus 307 ~p~~~~~~~~~~~~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v--~~Gpg~~-----~~aH~~dE~i~i~ 377 (395)
T TIGR03526 307 FPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVI--GFGPGDE-----DQAHAPNEKTWKE 377 (395)
T ss_pred cCccccCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeecccceehhhcCCCEE--EECCcch-----hhccCCCceEEHH
Confidence 233 446899999999999999888653 235566777754 443 47876 4698863 4699999999999
Q ss_pred chHHHHHHHHHHHHHHHh
Q 011407 459 VLPVGAAVHATIAERFLN 476 (486)
Q Consensus 459 ~l~~~~~i~~~~i~~~l~ 476 (486)
++.+++++|+.++.+||+
T Consensus 378 ~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03526 378 DLVKAAAMYAAIPTVYLQ 395 (395)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 999999999999999874
No 16
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=1.4e-49 Score=411.93 Aligned_cols=366 Identities=17% Similarity=0.205 Sum_probs=290.0
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcc
Q 011407 86 EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDAL 165 (486)
Q Consensus 86 ~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtV 165 (486)
.+.+.+ +++++++++++++|++|||++++|.++++||.++|+++||++...+...|++++++.+ +|+|+|+||+|||
T Consensus 3 ~~~~~i--~~~~~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~~-~~~l~l~~H~DtV 79 (395)
T TIGR03320 3 QIKSEA--KKYRGDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHH--HHHHHHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCCC-CcEEEEEeccccc
Confidence 467777 7888999999999999999999999999999999999999843333457999998643 5899999999999
Q ss_pred cCcCCCCC---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcCc--HHHHHHcCCC
Q 011407 166 PIQEAVEW---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNG--AKRMMADGAL 236 (486)
Q Consensus 166 P~~~~~~~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~G--~~~l~~~g~~ 236 (486)
|+++...| ||.+ +++|++||||+. |++++++.|+++|++.+..++++|.|++++|||.++| ...++++..+
T Consensus 80 p~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03320 80 GIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI 159 (395)
T ss_pred CCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC
Confidence 98776666 5555 468999999983 9999999999999998877888999999999997653 4566665434
Q ss_pred ccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc-cCC-CCC
Q 011407 237 EDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE-ANP-LDS 314 (486)
Q Consensus 237 ~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~-~~~-~~~ 314 (486)
.+|++++.+++. ..+. .|. .|..+++|+++|+++|++.|+.|+||+..+++++..|+++.... ..+ .+.
T Consensus 160 -~~d~~iv~ep~~----~~i~--~g~--~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03320 160 -KPEFVVITEPTD----MNIY--RGQ--RGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEEcCCCc----cceE--Eec--ceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCc
Confidence 589999877542 1222 232 28889999999999999999999999999999999998875322 122 234
Q ss_pred eEEEEEEEecCc-cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCC-----------C
Q 011407 315 QVVSVTYFNGGD-HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNT-----------V 382 (486)
Q Consensus 315 ~~~~v~~i~gG~-~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~-----------~ 382 (486)
.+++++.|++|. +.|+||++|++.+|+|++|+++.+++.++|++++... +..+++++.....+ .
T Consensus 231 ~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T TIGR03320 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAKVEMYNYDRPSYTGLVYPTECY 306 (395)
T ss_pred CceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhc----CCCceEeeeccCcccccccccccccc
Confidence 688999999875 8899999999999999999999999999999987542 22344443210001 1
Q ss_pred CCC--CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHH-HHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCC
Q 011407 383 YPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFS-FYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDED 458 (486)
Q Consensus 383 ~~~--~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~-~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~ 458 (486)
+|+ +..++|+++.+.+++++++|.++. ....++++|.+ ++.+ ++|++ .+||++. .++|++|||++++
T Consensus 307 ~~~~~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v--~~Gpg~~-----~~aH~~nE~v~i~ 377 (395)
T TIGR03320 307 FPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVI--GFGPGDE-----DQAHAPNEKTWKE 377 (395)
T ss_pred cCccccCCCCHHHHHHHHHHHHHhCCCCc--eeecceecccceehhhcCCCEE--EECCCch-----hhccCCCcEEEHH
Confidence 233 346899999999999999888653 23556777774 4444 47876 4799864 4699999999999
Q ss_pred chHHHHHHHHHHHHHHHh
Q 011407 459 VLPVGAAVHATIAERFLN 476 (486)
Q Consensus 459 ~l~~~~~i~~~~i~~~l~ 476 (486)
++.+++++|+.++.+||.
T Consensus 378 ~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 378 DLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999999984
No 17
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=2.1e-49 Score=407.27 Aligned_cols=353 Identities=19% Similarity=0.227 Sum_probs=282.2
Q ss_pred HHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEec--CCCceEEEEEcCCCCcEEEEEeccCcccCcCCC---CCcc
Q 011407 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--LAKTGIRAWVGTGGPPFVALRADMDALPIQEAV---EWEY 175 (486)
Q Consensus 101 ~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~---~~p~ 175 (486)
++++++|++|||+|++|.++++||+++|+++||+++.. ++++|++++.++ ++|+|+|+||+||||+++.+ ..||
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 57899999999999999999999999999999998753 346799998755 46999999999999987544 4577
Q ss_pred cc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcC--CCccccEEEEEec
Q 011407 176 KS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADG--ALEDVEAIFAVHV 247 (486)
Q Consensus 176 ~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g--~~~~~d~~i~~~~ 247 (486)
.+ .++|++||||+ | |++++++.|++.+++.+.+++++|.|+|++|||.++ |++.+++.. ....+|++++.++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 76 56899999999 5 888888999998888887889999999999999863 888877531 1125799998887
Q ss_pred CCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc-cCCCCCeEEEEEEEecCc
Q 011407 248 SHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE-ANPLDSQVVSVTYFNGGD 326 (486)
Q Consensus 248 ~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~-~~~~~~~~~~v~~i~gG~ 326 (486)
+...+.+.. +..|. .|..+++++++|+++|++.|+.|+||+..+++++..|+...... ...+...+++++.|+||.
T Consensus 161 ~~~~~~~~~-i~~~~--~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGDV-IKNGR--RGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCce-EEEee--eEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 543222211 12222 27889999999999999999999999999999999998763221 111344689999999996
Q ss_pred -cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Q 011407 327 -HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLG 405 (486)
Q Consensus 327 -~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G 405 (486)
..|+||++|++++|+|++|+++.+++.++|++++++ .++++++++.. ...|...+++++++.+++++++++|
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~~~---~~~p~~~~~~~~~~~~~~a~~~~~g 310 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEWSL---SGEPFLTNDGKLIDKAREAIEETNG 310 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEEec---CCcceeCCCCHHHHHHHHHHHHHhC
Confidence 679999999999999999999999999999998875 35566666542 1122223488999999999999888
Q ss_pred CCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 406 PMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 406 ~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
.++. +...+|++|++++.. .+|++ .+||+.. .+|++||+++++++.+++++|+.++.++
T Consensus 311 ~~~~--~~~~~g~~d~~~~~~~g~p~~--~~Gp~~~------~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 311 IKPE--LSTGGGTSDGRFIALMGAEVV--EFGPVNA------TIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCCc--eecCCCCchHHHHHHcCCCEE--EecCCcc------cCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 7653 456788899998876 36665 4688863 4999999999999999999999998764
No 18
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=1.6e-49 Score=408.90 Aligned_cols=348 Identities=18% Similarity=0.213 Sum_probs=282.0
Q ss_pred HHHHHhhhCCC---CCCChHHHHHHHHHHHHhCCCceEecC---CCce----EEEEE-cCCCCcEEEEEeccCcccCcCC
Q 011407 102 SVRRTIHQNPE---LAFQEFETSRLLRAELDRMEIGYKYPL---AKTG----IRAWV-GTGGPPFVALRADMDALPIQEA 170 (486)
Q Consensus 102 ~ll~~lv~iPs---~s~~E~~~a~~l~~~L~~~G~~v~~~~---~~~n----via~~-g~~~~~~ill~gH~DtVP~~~~ 170 (486)
+++++|++||| ++++|.++++||.++|+++|++++... +..| +++.+ |++++|+|+|+|||||||+++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 67999999999 778999999999999999999987531 2233 55555 5444689999999999998755
Q ss_pred CCC---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEE
Q 011407 171 VEW---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAI 242 (486)
Q Consensus 171 ~~~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~ 242 (486)
+.| ||.+ +++|++||||+. ++++++|.|++.|++.+..++++|.|+|+++||.|+ |++.+++++.++++|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 555 6666 568999999983 899999999999999888889999999999999887 99999999877668999
Q ss_pred EEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhccc------CCCCCeE
Q 011407 243 FAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA------NPLDSQV 316 (486)
Q Consensus 243 i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~------~~~~~~~ 316 (486)
++.+++. .+.+.+ +.. |..+++|+++|+++|+|.|+.|+||+..+++++.+|+++..... ......+
T Consensus 162 i~~~~~~---~~~v~~--~~~--G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIPEPSG---GDNIVI--GHK--GSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EECCCCC---CCceEE--Eec--ceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 9776532 122222 222 78899999999999999999999999999999999988753211 1123468
Q ss_pred EEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHH
Q 011407 317 VSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHV 396 (486)
Q Consensus 317 ~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l 396 (486)
++++.++||...|+||++|++.+|+|+.|.++.+++.++|++++++.+...+++++++.... .+++.....++++++.+
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 313 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVK-WSGPNETPPDSRLVKAL 313 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeee-ecCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999987765566665543211 11133455789999999
Q ss_pred HHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHH
Q 011407 397 KKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAV 466 (486)
Q Consensus 397 ~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i 466 (486)
.+++++.+|.++. +...+|++|++++.+. +|++. +||+.. ..+|++||+++++++.+++++
T Consensus 314 ~~~~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 314 EAIIKKVRGIEPE--VLVSTGGTDARFLRKAGIPSIV--YGPGDL-----ETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHHHHHhCCCCe--EeeeccchhHHHHHHcCCcEEE--ECCCCc-----cccCCCCceeEHHHHHHHhhC
Confidence 9999998888653 4567899999999864 88864 688743 369999999999999998874
No 19
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.7e-48 Score=402.33 Aligned_cols=349 Identities=15% Similarity=0.199 Sum_probs=280.3
Q ss_pred HHHHHHHHHhhhCCCCCCCh-------HHHHHHHHHHHHhCCCceEec-----CCCceEEEEEcCCCCcEEEEEeccCcc
Q 011407 98 DWLKSVRRTIHQNPELAFQE-------FETSRLLRAELDRMEIGYKYP-----LAKTGIRAWVGTGGPPFVALRADMDAL 165 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~E-------~~~a~~l~~~L~~~G~~v~~~-----~~~~nvia~~g~~~~~~ill~gH~DtV 165 (486)
+++++++++|++|||+|++| .++++||.++|+++|++++.. ++++|++++++++ .++|+|+||||||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~-~~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSG-EGGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCC-CCeEEEEeeecee
Confidence 47999999999999999875 579999999999999987643 1468999999544 4689999999999
Q ss_pred cCcC--CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCcc
Q 011407 166 PIQE--AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALED 238 (486)
Q Consensus 166 P~~~--~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~ 238 (486)
|+++ |+.+||.+ +++|++||||+. |+++++|.|++.|++. .++++|.|+|++|||.|+ |++++++++.+ .
T Consensus 84 p~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~-~ 160 (383)
T PRK05111 84 PFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAI-R 160 (383)
T ss_pred cCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCC-C
Confidence 9854 45668886 578999999984 8999999999999864 467899999999999987 99999998765 3
Q ss_pred ccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhc----ccCC---
Q 011407 239 VEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR----EANP--- 311 (486)
Q Consensus 239 ~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~----~~~~--- 311 (486)
.|++++.+++... +. .+. .|..+++|+++|+++|++.|+.|+||+..+++++.+|+.+... ...+
T Consensus 161 ~d~~i~~ep~~~~----~~--~~~--~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~ 232 (383)
T PRK05111 161 PDCAIIGEPTSLK----PV--RAH--KGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAFT 232 (383)
T ss_pred CCEEEEcCCCCCc----ee--ecc--cceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccCC
Confidence 6888876654321 11 122 2788999999999999999999999999999999999876421 1111
Q ss_pred CCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCC--CCCC
Q 011407 312 LDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP--TVND 389 (486)
Q Consensus 312 ~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~--~~~d 389 (486)
...++++++.|+||...|+||++|++.+|+|++|+++.+++.++|++.+++.+..++++++++... ..+++ ...+
T Consensus 233 ~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 309 (383)
T PRK05111 233 VPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPLH---PPIPGYECPAD 309 (383)
T ss_pred CCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeccc---cCCCCcCCCCC
Confidence 134689999999999999999999999999999999999999999999998887777777665321 12333 3457
Q ss_pred HHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHH
Q 011407 390 EDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHA 468 (486)
Q Consensus 390 ~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~ 468 (486)
+++++.+++++ |.++ ...++++|+.++... +|++ .+||++. ..+|++||+++++++.+++++|+
T Consensus 310 ~~l~~~~~~~~----g~~~----~~~~~~~Da~~~~~~g~p~v--~~G~g~~-----~~~H~~~E~v~~~~l~~~~~i~~ 374 (383)
T PRK05111 310 HQLVRVVEKLL----GHKA----EVVNYCTEAPFIQQLGCPTL--VLGPGSI-----EQAHQPDEYLELSFIKPTRELLR 374 (383)
T ss_pred CHHHHHHHHHh----CCCC----ceeeeeccHHHHHhcCCCEE--EECCCch-----HhCcCCCCcccHHHHHHHHHHHH
Confidence 78888776553 5433 234578998887653 6665 4688752 36999999999999999999999
Q ss_pred HHHHHHHh
Q 011407 469 TIAERFLN 476 (486)
Q Consensus 469 ~~i~~~l~ 476 (486)
.++.+|+.
T Consensus 375 ~~~~~~~~ 382 (383)
T PRK05111 375 QLIHHFCL 382 (383)
T ss_pred HHHHHHhc
Confidence 99999975
No 20
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.3e-48 Score=404.53 Aligned_cols=358 Identities=17% Similarity=0.248 Sum_probs=292.5
Q ss_pred cchHHHHHHHHHHhhhCCCCC---CChHHHHHHHHHHHHhCCCceEecC---C--------CceEEEEEcCCCCcEEEEE
Q 011407 94 PETVDWLKSVRRTIHQNPELA---FQEFETSRLLRAELDRMEIGYKYPL---A--------KTGIRAWVGTGGPPFVALR 159 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s---~~E~~~a~~l~~~L~~~G~~v~~~~---~--------~~nvia~~g~~~~~~ill~ 159 (486)
|.+.+++++++++|++|||+| ++|.++++||+++|+++||+++... + ++|+++..+++ +|+|+|+
T Consensus 2 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ill~ 80 (394)
T PRK08651 2 EAMMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSG-NPHLHFN 80 (394)
T ss_pred chhHHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCC-CceEEEE
Confidence 457899999999999999998 6788999999999999999987532 1 24578776554 4899999
Q ss_pred eccCcccCcCC--CCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHH
Q 011407 160 ADMDALPIQEA--VEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMA 232 (486)
Q Consensus 160 gH~DtVP~~~~--~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~ 232 (486)
||+||||+++. ...||++ .++|++||||+. ++++++|.|++.|++.+ +++|.|+|++|||+|+ |++++++
T Consensus 81 ~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~ 157 (394)
T PRK08651 81 GHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVE 157 (394)
T ss_pred eeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHh
Confidence 99999998642 5567877 468999999983 89999999999998765 7999999999999987 9999999
Q ss_pred cCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhccc---
Q 011407 233 DGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA--- 309 (486)
Q Consensus 233 ~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~--- 309 (486)
++.+ ++|++++.+++.. +.+.. +. .|..+++|+++|+++|++.|+.|+||+..|++++.+|++...+..
T Consensus 158 ~~~~-~~d~~i~~~~~~~---~~i~~--~~--~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~ 229 (394)
T PRK08651 158 EGKV-TPDYVIVGEPSGL---DNICI--GH--RGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKY 229 (394)
T ss_pred ccCC-CCCEEEEecCCCC---CceEE--ec--ccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhccc
Confidence 8765 4788887765421 12222 22 278899999999999999999999999999999999986532111
Q ss_pred ---C-CCCCeEEEEEE--EecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCC
Q 011407 310 ---N-PLDSQVVSVTY--FNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVY 383 (486)
Q Consensus 310 ---~-~~~~~~~~v~~--i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~ 383 (486)
. .....+++++. ++||.+.|+||++|++.+|+|++|.++.+++.++|++++++.+..++++++++... .+
T Consensus 230 ~~~~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~~~----~~ 305 (394)
T PRK08651 230 EYDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEITP----FS 305 (394)
T ss_pred cccccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEEec----cc
Confidence 1 12335678888 99999999999999999999999999999999999999999888878777776552 22
Q ss_pred CC--CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCch
Q 011407 384 PP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVL 460 (486)
Q Consensus 384 ~~--~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l 460 (486)
++ ...++++++.+++++++++|.++. +....|++|++++... +|++. +||+.. ..+|++||+++++++
T Consensus 306 ~~~~~~~~~~l~~~~~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~i~~~~l 376 (394)
T PRK08651 306 EAFVTDPDSELVKALREAIREVLGVEPK--KTISLGGTDARFFGAKGIPTVV--YGPGEL-----ELAHAPDEYVEVKDV 376 (394)
T ss_pred CCccCCCCCHHHHHHHHHHHHHhCCCCc--eeeecCcccHHHHhhCCCcEEE--ECCCCh-----HhcCCCCceeEHHHH
Confidence 33 335678999999999998897653 4567899999999874 88854 588753 369999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 011407 461 PVGAAVHATIAERFLN 476 (486)
Q Consensus 461 ~~~~~i~~~~i~~~l~ 476 (486)
..++++|..++.++.+
T Consensus 377 ~~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 377 EKAAKVYEEVLKRLAK 392 (394)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999998753
No 21
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=9e-49 Score=410.67 Aligned_cols=362 Identities=14% Similarity=0.156 Sum_probs=280.1
Q ss_pred HHHHHHHHHhhhCCCCCCC-h--HHHHHHHHHHHHhCCCceEecC--CCceEEEEEcCCCCcEEEEEeccCcccCcC---
Q 011407 98 DWLKSVRRTIHQNPELAFQ-E--FETSRLLRAELDRMEIGYKYPL--AKTGIRAWVGTGGPPFVALRADMDALPIQE--- 169 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~-E--~~~a~~l~~~L~~~G~~v~~~~--~~~nvia~~g~~~~~~ill~gH~DtVP~~~--- 169 (486)
+++++++++|++|||++++ | .++++||.++|+++||+++... +++|++++++.+++|+|+|+||+||||+++
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 4688999999999999964 3 6999999999999999987542 578999998654468999999999999865
Q ss_pred CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcC--CCccccEE
Q 011407 170 AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADG--ALEDVEAI 242 (486)
Q Consensus 170 ~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g--~~~~~d~~ 242 (486)
|+..||.+ ++||++||||+. |+++++|.|++.+++.+ .++++|.|+|++|||.|+ |+..++++. .+ ++|++
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~-~~d~v 159 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKL-KADSV 159 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHh-CCCEE
Confidence 44557776 568999999994 89999999998887654 678999999999999998 888887752 23 46887
Q ss_pred EEEecCCCCCceeEEeccCcccceeeEEEEEEEe--ecCCCCCCCCCCcHHHHHHHHHHHHHhhhh--------------
Q 011407 243 FAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISG--KKGGAANPHRSVDPVLAASAAVISLQGLVS-------------- 306 (486)
Q Consensus 243 i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G--~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~-------------- 306 (486)
++ +++...+.+...+..+.+ |..+++++++| +++|+|.|+.|.||+..+++++.+|.+...
T Consensus 160 i~-E~~~~~~~~~~~i~~~~k--G~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 236 (436)
T PRK06446 160 IM-EGAGLDPKGRPQIVLGVK--GLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVREL 236 (436)
T ss_pred EE-CCCCccCCCCeEEEEecC--eEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCC
Confidence 74 654322333222222333 88899999999 999999999999999999999999975420
Q ss_pred --------c------------c------c--------CCCCCeEEEEEEEecC----ccCccccCeEEEEEEEeCCChhh
Q 011407 307 --------R------------E------A--------NPLDSQVVSVTYFNGG----DHLDMIPDAVVIGGTLRAFSNTS 348 (486)
Q Consensus 307 --------~------------~------~--------~~~~~~~~~v~~i~gG----~~~nvIP~~a~~~~diR~~p~~~ 348 (486)
+ . . ......++|++.+.|| ...|+||++|++++|+|++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~ 316 (436)
T PRK06446 237 TEEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQD 316 (436)
T ss_pred CHHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCC
Confidence 0 0 0 0012367899989887 46799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh--
Q 011407 349 FYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-- 426 (486)
Q Consensus 349 ~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-- 426 (486)
.+++.++|++++++. +..+++++... .+ ......++++++.+++++++++|.++.. .....|++|+++|.+
T Consensus 317 ~~~v~~~l~~~~~~~----~~~~~~~~~~~-~~-p~~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~g~~d~~~~~~~~ 389 (436)
T PRK06446 317 PYKIFELLKKHLQKV----GFNGEIIVHGF-EY-PVRTSVNSKVVKAMIESAKRVYGTEPVV-IPNSAGTQPMGLFVYKL 389 (436)
T ss_pred HHHHHHHHHHHHHHc----CCCeEEEEcCC-cc-eeecCCCCHHHHHHHHHHHHHhCCCCce-ecCCCCcchHHHHHHHh
Confidence 999999999999873 23455555421 11 1223468999999999999999886631 233456678888765
Q ss_pred hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHH
Q 011407 427 VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 475 (486)
Q Consensus 427 ~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l 475 (486)
.+|++...+|++... .++|++||+|++++|.+++++|..++.++.
T Consensus 390 gip~v~~~~g~g~~~----~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 390 GIRDIVSAIGVGGYY----SNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred CCCcceeecccCCCC----cCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 488765445665432 469999999999999999999999997763
No 22
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=2.4e-48 Score=403.37 Aligned_cols=366 Identities=17% Similarity=0.172 Sum_probs=285.3
Q ss_pred HHHHHHHHHHhhhCCCCCCC--hHHHHHHHHHHHHhCCCceEec---CCCceEEEEE-cCCC-CcEEEEEeccCcccCcC
Q 011407 97 VDWLKSVRRTIHQNPELAFQ--EFETSRLLRAELDRMEIGYKYP---LAKTGIRAWV-GTGG-PPFVALRADMDALPIQE 169 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~--E~~~a~~l~~~L~~~G~~v~~~---~~~~nvia~~-g~~~-~~~ill~gH~DtVP~~~ 169 (486)
.++++++|++|++|||++++ |.++++||+++|+++|++++.. ++++|+++++ |+++ .|+|+|+|||||||+++
T Consensus 8 ~~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~ 87 (400)
T TIGR01880 8 EDIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR 87 (400)
T ss_pred hHHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc
Confidence 67889999999999999864 6789999999999999997642 3578999999 4443 38999999999999864
Q ss_pred --CCCCccccc--CCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcCCCcccc
Q 011407 170 --AVEWEYKSK--VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADGALEDVE 240 (486)
Q Consensus 170 --~~~~p~~~~--~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g~~~~~d 240 (486)
|+.+||.+. +||++||||+ | +++++++.|+++|++.+..++++|.|+|++|||.|+ |++.+++++.+.+.|
T Consensus 88 ~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~ 167 (400)
T TIGR01880 88 EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALN 167 (400)
T ss_pred ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCc
Confidence 456688873 5899999999 4 888999999999999888889999999999999875 999999887666678
Q ss_pred EEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhc---------ccCC
Q 011407 241 AIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR---------EANP 311 (486)
Q Consensus 241 ~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~---------~~~~ 311 (486)
++++.+.+...|.+...+..+. .|..+++|+++|+++|++.|. +.||+..|++++..|+++... ...+
T Consensus 168 ~~~~~d~g~~~~~~~~~i~~~~--kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 244 (400)
T TIGR01880 168 LGFALDEGLASPDDVYRVFYAE--RVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAI 244 (400)
T ss_pred eEEEEcCCCcccccccceeEEe--eEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccc
Confidence 8887765432344422222222 288999999999999999864 479999999999988765211 1111
Q ss_pred CCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHH
Q 011407 312 LDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDED 391 (486)
Q Consensus 312 ~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~ 391 (486)
...++++++.|+||...|+||++|++.+|+|++|.++.+++.++|++++++.. .+++++++.... .+...+...+++
T Consensus 245 ~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~ 321 (400)
T TIGR01880 245 GDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADAG--EGVTYEFSQHSG-KPLVTPHDDSNP 321 (400)
T ss_pred cccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhccC--CceEEEEeecCC-CCCCCCCCCCCH
Confidence 12368999999999999999999999999999999999999999999998631 233344332210 111112234789
Q ss_pred HHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHH
Q 011407 392 MYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATI 470 (486)
Q Consensus 392 ~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~ 470 (486)
+++.+.+++++. +... .+....|++|+.++.. .+|++. +||+... ...+|++||++++++|.+++++|+++
T Consensus 322 lv~~l~~a~~~~-~~~~--~~~~~~g~tDa~~~~~~gip~v~--fgp~~~~---~~~aH~~dE~i~i~~l~~~~~~~~~~ 393 (400)
T TIGR01880 322 WWVAFKDAVKEM-GCTF--KPEILPGSTDSRYIRAAGVPALG--FSPMNNT---PVLLHDHNEFLNEAVFLRGIEIYQTL 393 (400)
T ss_pred HHHHHHHHHHHc-CCee--cceeecCcchHHHHHhCCCCeEE--ECCccCC---cccccCCCCceEHHHHHHHHHHHHHH
Confidence 999999999994 6543 2456789999999986 488853 5776421 13599999999999999999999999
Q ss_pred HHHHHh
Q 011407 471 AERFLN 476 (486)
Q Consensus 471 i~~~l~ 476 (486)
+.+|..
T Consensus 394 l~~~~~ 399 (400)
T TIGR01880 394 ISALAS 399 (400)
T ss_pred HHHhhc
Confidence 998863
No 23
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-48 Score=408.30 Aligned_cols=363 Identities=15% Similarity=0.156 Sum_probs=284.3
Q ss_pred chHHHHHHHHHHhhhCCCCC--CChHHHHHHHHHHHHhCCCceE---e---cCCCceEEEEEc-CCCCcEEEEEeccCcc
Q 011407 95 ETVDWLKSVRRTIHQNPELA--FQEFETSRLLRAELDRMEIGYK---Y---PLAKTGIRAWVG-TGGPPFVALRADMDAL 165 (486)
Q Consensus 95 ~~~~~l~~ll~~lv~iPs~s--~~E~~~a~~l~~~L~~~G~~v~---~---~~~~~nvia~~g-~~~~~~ill~gH~DtV 165 (486)
..++++++++++|++|||++ ++|.++++||.++|+++|++++ . .++++|++++++ ++++|+|+|+||||||
T Consensus 34 ~~~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtV 113 (472)
T PRK09133 34 ADQQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVV 113 (472)
T ss_pred hhHHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccC
Confidence 45788999999999999998 7789999999999999999853 2 134789999984 4445899999999999
Q ss_pred cCcC--CCCCcccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC-CcC-cHHHHHHcCC-C
Q 011407 166 PIQE--AVEWEYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEE-AGN-GAKRMMADGA-L 236 (486)
Q Consensus 166 P~~~--~~~~p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE-~g~-G~~~l~~~g~-~ 236 (486)
|+++ |+..||.+ ++||++||||+ | |+++++|.|++.|++.+..++++|.|+|++||| +|+ |++.++++.. .
T Consensus 114 p~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~ 193 (472)
T PRK09133 114 EAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDL 193 (472)
T ss_pred CCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhc
Confidence 9853 45557776 46899999999 4 899999999999999888899999999999999 665 9999887632 1
Q ss_pred ccccEEEEEecCC------CCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc--
Q 011407 237 EDVEAIFAVHVSH------EHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE-- 308 (486)
Q Consensus 237 ~~~d~~i~~~~~~------~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~-- 308 (486)
-+.|++++ +++. ++|+.. .+..|.+ |..+++|+++|+++|+|.|+ +.|||..++++|.+|+++..+.
T Consensus 194 ~~~~~~i~-e~~~~~~~~~gept~~-~i~~g~k--G~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~ 268 (472)
T PRK09133 194 IDAEFALN-EGGGGTLDEDGKPVLL-TVQAGEK--TYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVML 268 (472)
T ss_pred cCeEEEEE-CCCccccCCCCCceEE-Eeeeecc--eeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCcc
Confidence 14688887 6543 344332 1223333 88899999999999999997 5899999999999997641100
Q ss_pred --------------------------------------------cCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCC
Q 011407 309 --------------------------------------------ANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAF 344 (486)
Q Consensus 309 --------------------------------------------~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~ 344 (486)
..+....+++++.|+||...|+||++|++.+|+|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~ 348 (472)
T PRK09133 269 NDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIF 348 (472)
T ss_pred CCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeC
Confidence 000124688999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhc-CCCcccccCCCcccchHHH
Q 011407 345 SNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLL-GPMNYRVVPPMMGAEDFSF 423 (486)
Q Consensus 345 p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~-G~~~~~~~~~~~g~tD~~~ 423 (486)
|+++.+++.++|++++++ ..++++..... ...++...+.++++.+++++++++ |.+. .+..+.|++|+.+
T Consensus 349 p~~~~e~v~~~I~~~i~~------~~v~v~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ggtDa~~ 419 (472)
T PRK09133 349 PGDTIEAVRATLKQVVAD------PAIKITRIGDP-SPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMSTGATDGRY 419 (472)
T ss_pred CchhHHHHHHHHHHHhcC------CCEEEEEccCC-CCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccccccchHH
Confidence 999999999999999864 23455443211 122344567899999999999987 5432 2456788999999
Q ss_pred HHh-hcCccEE--EEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 424 YSE-VVPAAFY--YIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 424 ~~~-~~p~~~~--~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+.. .+|++.+ .+||+.. ..+|++||+++++++.+++++|+.++.+|++
T Consensus 420 ~~~~gip~~~~~~i~gp~~~-----~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 420 LRAAGIPTYGVSGLFGDPDD-----TFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred HHhcCCCceeecCcccCccc-----ccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 876 4787521 2455432 4699999999999999999999999998864
No 24
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-47 Score=403.65 Aligned_cols=374 Identities=15% Similarity=0.152 Sum_probs=284.8
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCC------hHHHHHHHHHHHHhCCC-ceEec--CCCceEEEEEcCC-CC
Q 011407 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQ------EFETSRLLRAELDRMEI-GYKYP--LAKTGIRAWVGTG-GP 153 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~------E~~~a~~l~~~L~~~G~-~v~~~--~~~~nvia~~g~~-~~ 153 (486)
++++.+++ +++++++++++++|++|||+|++ |.++++||.++|+++|| +++.. ++++|++++++++ ++
T Consensus 6 ~~~~~~~i--~~~~~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~ 83 (449)
T PRK07907 6 ADDLRARV--AELLPRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGA 83 (449)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCC
Confidence 34688888 88999999999999999999964 67899999999999998 67653 4678999998543 46
Q ss_pred cEEEEEeccCcccCcCC---CCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-
Q 011407 154 PFVALRADMDALPIQEA---VEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN- 225 (486)
Q Consensus 154 ~~ill~gH~DtVP~~~~---~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~- 225 (486)
|+|+|+||+||||+++. +..||.+ ++||++||||+. |++++++.|+++| +.+++++|.|++++|||+|+
T Consensus 84 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~ 160 (449)
T PRK07907 84 PTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSP 160 (449)
T ss_pred CEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCc
Confidence 89999999999998654 4456766 468999999994 8999999999998 34678999999999999987
Q ss_pred cHHHHHHcCC-CccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEE--eecCCCCC-CCCCCcHHHHHHHHHHHH
Q 011407 226 GAKRMMADGA-LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVIS--GKKGGAAN-PHRSVDPVLAASAAVISL 301 (486)
Q Consensus 226 G~~~l~~~g~-~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~--G~~~Ha~~-p~~G~nAi~~a~~~i~~L 301 (486)
|.+.++++.. ..++|++++.+++... .+...+..+.+ |..+++++++ |+++|+|. +..+.||+..+++++.+|
T Consensus 161 g~~~~l~~~~~~~~~d~~iv~E~~~~~-~~~p~i~~~~k--G~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l 237 (449)
T PRK07907 161 SLERLLAEHPDLLAADVIVIADSGNWS-VGVPALTTSLR--GNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATL 237 (449)
T ss_pred cHHHHHHhchHhhcCCEEEEecCCcCC-CCCeEEEEecC--CcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhh
Confidence 9999988632 1257999988875321 11111112222 7889999988 88999998 567899999999999999
Q ss_pred Hhhhhccc-------CC---------------------------------CCCeEEEEEEEec---CccCccccCeEEEE
Q 011407 302 QGLVSREA-------NP---------------------------------LDSQVVSVTYFNG---GDHLDMIPDAVVIG 338 (486)
Q Consensus 302 ~~l~~~~~-------~~---------------------------------~~~~~~~v~~i~g---G~~~nvIP~~a~~~ 338 (486)
++...+.. .+ ....+++++.|++ |.+.|+||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~ 317 (449)
T PRK07907 238 HDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARAR 317 (449)
T ss_pred CCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEE
Confidence 76421100 00 1235788888886 46889999999999
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCccc
Q 011407 339 GTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGA 418 (486)
Q Consensus 339 ~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~ 418 (486)
+|+|++|+++.+++.++|++++++.. .++.+++++.... ........++++++.+++++++++|.++. ....+|+
T Consensus 318 ~diR~~p~~~~e~v~~~l~~~l~~~~-~~~~~~~~~~~~~--~~p~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~ 392 (449)
T PRK07907 318 LSLRVAPGQDAAEAQDALVAHLEAHA-PWGAHVTVERGDA--GQPFAADASGPAYDAARAAMREAWGKDPV--DMGMGGS 392 (449)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHhcC-CCCcEEEEEECCC--cCceeCCCCCHHHHHHHHHHHHHhCCCce--ecCCCCc
Confidence 99999999999999999999998742 2345566654321 11223446899999999999999998763 2334444
Q ss_pred chH-HHHHhhcCc-cEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 419 EDF-SFYSEVVPA-AFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 419 tD~-~~~~~~~p~-~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
+++ +.+.+..+. .+..+||++.. .++|++||+++++++.+++++|+.++.+|
T Consensus 393 ~~~~~~~~~~~~~~~~v~~Gpg~~~----~~aH~~nE~i~i~~l~~~~~~~~~~l~~~ 446 (449)
T PRK07907 393 IPFIAELQEAFPQAEILVTGVEDPK----TRAHSPNESVHLGELERAAVAEALLLARL 446 (449)
T ss_pred HHHHHHHHHhcCCCcEEEeccCCCC----CCCcCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 443 334433332 23347888642 36999999999999999999999999887
No 25
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-47 Score=404.26 Aligned_cols=371 Identities=16% Similarity=0.147 Sum_probs=284.6
Q ss_pred HHHHHHhcCcchHHHHHHHHHHhhhCCCCCC------ChHHHHHHHHHHHHhCCCc-eEec--CCCceEEEEEc-CCCCc
Q 011407 85 KEVMELARRPETVDWLKSVRRTIHQNPELAF------QEFETSRLLRAELDRMEIG-YKYP--LAKTGIRAWVG-TGGPP 154 (486)
Q Consensus 85 ~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~------~E~~~a~~l~~~L~~~G~~-v~~~--~~~~nvia~~g-~~~~~ 154 (486)
+++.+++ +++++++++++++|++|||+++ +|.++++||+++|+++||+ ++.. .+++|+++++. .+++|
T Consensus 3 ~~~~~~~--~~~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~ 80 (456)
T PRK08201 3 QQVEAYL--RERREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKP 80 (456)
T ss_pred hHHHHHH--HHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 5788888 8899999999999999999995 4678999999999999997 4433 35679999884 33468
Q ss_pred EEEEEeccCcccCcCC---CCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-c
Q 011407 155 FVALRADMDALPIQEA---VEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-G 226 (486)
Q Consensus 155 ~ill~gH~DtVP~~~~---~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G 226 (486)
+|+|+||+||||+++. +..||.+ +++|++||||+. |++++++.|++.|++.+..++++|.|+|++|||.|+ |
T Consensus 81 ~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g 160 (456)
T PRK08201 81 TVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPN 160 (456)
T ss_pred EEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCcc
Confidence 9999999999998654 4457776 568999999984 899999999999988777789999999999999987 8
Q ss_pred HHHHHHcCC--CccccEEEEEecCCCCCce-eEEeccCcccceeeEEEEEEEeecC--CCCCCC-CCCcHHHHHHHHHHH
Q 011407 227 AKRMMADGA--LEDVEAIFAVHVSHEHPTG-VIGSRPGPLLAGCGFFHAVISGKKG--GAANPH-RSVDPVLAASAAVIS 300 (486)
Q Consensus 227 ~~~l~~~g~--~~~~d~~i~~~~~~~~p~g-~i~~~~G~~~ag~~~~~i~v~G~~~--Ha~~p~-~G~nAi~~a~~~i~~ 300 (486)
...++++.. + ++|++++.+++...+.. .+. .|.+ |..+++|+++|+++ |||.|. .+.|||..|+++|.+
T Consensus 161 ~~~~l~~~~~~~-~~d~~ii~e~~~~~~~~~~i~--~g~k--G~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~ 235 (456)
T PRK08201 161 LDSFVEEEKDKL-AADVVLISDTTLLGPGKPAIC--YGLR--GLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLAS 235 (456)
T ss_pred HHHHHHhhHHhc-cCCEEEEeCCCcCCCCCEEEE--EecC--CeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHh
Confidence 888887531 2 46899988875432221 232 2333 89999999999998 999855 457999999999999
Q ss_pred HHhhhhcc-----------------------------------cCC-C------------CCeEEEEEEEecCc----cC
Q 011407 301 LQGLVSRE-----------------------------------ANP-L------------DSQVVSVTYFNGGD----HL 328 (486)
Q Consensus 301 L~~l~~~~-----------------------------------~~~-~------------~~~~~~v~~i~gG~----~~ 328 (486)
|+++..+. ..+ . ...+++++.|+||. ..
T Consensus 236 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~ 315 (456)
T PRK08201 236 LHDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTK 315 (456)
T ss_pred cCCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCc
Confidence 97532100 000 0 12478898888874 37
Q ss_pred ccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCc
Q 011407 329 DMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMN 408 (486)
Q Consensus 329 nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~ 408 (486)
|+||++|++.+|+|++|+++.+++.++|++++++.. ..+.+++++... .........++++++++.+++++++|.++
T Consensus 316 NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~~~--~~~~~~~~~~~~~~~~l~~a~~~~~g~~~ 392 (456)
T PRK08201 316 TVIPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRRFD--KGPAFVAPIDHPAIQAAARAYEAVYGTEA 392 (456)
T ss_pred eEECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEECC--CcCceecCCCCHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999998632 223344443321 11122345688999999999999988765
Q ss_pred ccccCCCcccc---hHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 409 YRVVPPMMGAE---DFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 409 ~~~~~~~~g~t---D~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
. ....+++ |..++.. .+|++. +|||... .++|++||++++++|.+++++|+.++.+|
T Consensus 393 ~---~~~~gg~~~~~~~~~~~~gip~v~--~GpG~~~----~~~H~~nE~v~i~~l~~~~~~l~~~~~~~ 453 (456)
T PRK08201 393 A---FTRMGGSIPVVETFSSQLHIPIVL--MGFGLPS----ENFHAPNEHFHLENFDKGLRTLVEYWHQL 453 (456)
T ss_pred e---ecCCCCcHHHHHHHHHHhCCCEEE--ecCCCCC----CCCCCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 3 2233444 4544433 478764 6887532 46999999999999999999999999887
No 26
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.6e-48 Score=399.29 Aligned_cols=350 Identities=15% Similarity=0.178 Sum_probs=277.0
Q ss_pred HHHHHHHHHhhhCCCCCCCh-HHHHHHHHHHHHhCCCceEec----CCCceEEEEEcCCCCcEEEEEeccCcccCcC--C
Q 011407 98 DWLKSVRRTIHQNPELAFQE-FETSRLLRAELDRMEIGYKYP----LAKTGIRAWVGTGGPPFVALRADMDALPIQE--A 170 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~E-~~~a~~l~~~L~~~G~~v~~~----~~~~nvia~~g~~~~~~ill~gH~DtVP~~~--~ 170 (486)
.++++++++|++|||+|++| .++++||.++|+++|+++++. .+++|++++++++++|+|+|+||+||||+++ |
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~~~W 83 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDGQAW 83 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCCCCC
Confidence 57899999999999999887 499999999999999998653 2368999999654468999999999999864 2
Q ss_pred CCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCC--CccccEEE
Q 011407 171 VEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGA--LEDVEAIF 243 (486)
Q Consensus 171 ~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~--~~~~d~~i 243 (486)
+..||.+ +++|++||||+. |+++++++|++.|++. .++++|.|+|++|||.|+ |++.+++... ...+|+++
T Consensus 84 ~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i 161 (385)
T PRK07522 84 TSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGCI 161 (385)
T ss_pred CCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEEE
Confidence 4457776 468999999983 9999999999999876 467899999999999886 9999987522 12478888
Q ss_pred EEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccC--C------CCCe
Q 011407 244 AVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREAN--P------LDSQ 315 (486)
Q Consensus 244 ~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~--~------~~~~ 315 (486)
+.+++. ..+. .+. .|..+++|+++|+++|+|.|+.|+||+..+++++..|+++..+... + ...+
T Consensus 162 ~~ep~~----~~~~--~~~--~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 233 (385)
T PRK07522 162 VGEPTS----MRPV--VGH--KGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPYS 233 (385)
T ss_pred EccCCC----Ceee--eee--cceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCcc
Confidence 665432 1121 122 2788999999999999999999999999999999999887432211 1 1136
Q ss_pred EEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHH------HHhhcCceeEEEEecCCCCCCCCCC--
Q 011407 316 VVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE------QARVFRCSATVDFFDKGNTVYPPTV-- 387 (486)
Q Consensus 316 ~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~~g~~~~v~~~~~~~~~~~~~~-- 387 (486)
+++++.|+||...|+||++|++.+|+|++|.++.+++.++|++.+++ .+...+++++++... .+++..
T Consensus 234 t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~ 309 (385)
T PRK07522 234 TLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEPLS----AYPGLDTA 309 (385)
T ss_pred eeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEecc----CCCCCCCC
Confidence 78999999999999999999999999999999999999999999987 234456666665542 344443
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHH
Q 011407 388 NDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAV 466 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i 466 (486)
.++++++.+++++ +..+ .....+++|.+++.. .+|++ .+||+.. ..+|++||+++++++.+++++
T Consensus 310 ~~~~~v~~~~~~~----~~~~---~~~~~~~td~~~~~~~gip~v--~~Gpg~~-----~~~H~~~E~i~i~~l~~~~~~ 375 (385)
T PRK07522 310 EDAAAARLVRALT----GDND---LRKVAYGTEAGLFQRAGIPTV--VCGPGSI-----EQAHKPDEFVELAQLAACEAF 375 (385)
T ss_pred CCcHHHHHHHHHh----CCCC---cceEeeecchHHhccCCCCEE--EECCCCh-----hhCCCCCccccHHHHHHHHHH
Confidence 4688888877654 3322 223567899998875 37775 4688753 369999999999999999999
Q ss_pred HHHHHHHHH
Q 011407 467 HATIAERFL 475 (486)
Q Consensus 467 ~~~~i~~~l 475 (486)
|..++.++.
T Consensus 376 ~~~~~~~~~ 384 (385)
T PRK07522 376 LRRLLASLA 384 (385)
T ss_pred HHHHHHHHh
Confidence 999998764
No 27
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=3.1e-47 Score=387.60 Aligned_cols=335 Identities=13% Similarity=0.128 Sum_probs=270.2
Q ss_pred cchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCC
Q 011407 94 PETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEW 173 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~ 173 (486)
+.+.+++++++++|++|||++++|.++++||.++|+++|++++... ..|++. . + +|+|+|+||+||||+
T Consensus 6 ~~~~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~~-~--g-~~~lll~gH~DtVp~------ 74 (346)
T PRK00466 6 ELVKQKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILP-DSNSFI-L--G-EGDILLASHVDTVPG------ 74 (346)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEec-CCCcEe-c--C-CCeEEEEeccccCCC------
Confidence 3456899999999999999999999999999999999999988654 346553 2 2 368999999999994
Q ss_pred cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecC
Q 011407 174 EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVS 248 (486)
Q Consensus 174 p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~ 248 (486)
+|.+ .++|++||||+. |++++++.|+++|++.+ .+|.|+|++|||+|+ |++.+++++. ++|++++.+|+
T Consensus 75 ~~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~ep~ 148 (346)
T PRK00466 75 YIEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVGEPS 148 (346)
T ss_pred CCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEcCCC
Confidence 2454 568999999984 88999999999998865 368999999999986 9999999863 57999877654
Q ss_pred CCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccC
Q 011407 249 HEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHL 328 (486)
Q Consensus 249 ~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~ 328 (486)
.. ..+. .|. .|..+++|+++|+++|+|.|+ .||+..|++++.+|.+... .....+++++.++||...
T Consensus 149 ~~---~~i~--~~~--kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~ 215 (346)
T PRK00466 149 NG---TDIV--VEY--RGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESY 215 (346)
T ss_pred CC---CceE--EEe--eEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcC
Confidence 21 1122 232 289999999999999999986 5999999999999876532 123467899999999999
Q ss_pred ccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCc
Q 011407 329 DMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMN 408 (486)
Q Consensus 329 nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~ 408 (486)
|+||++|++.+|+|++|+++.+++.++|++.+++ ++++ .... ........++++++.+.+++++ +|.++
T Consensus 216 NvvP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~--~~~~--~~~~~~~~~~~lv~~l~~a~~~-~g~~~ 284 (346)
T PRK00466 216 NVTPAKLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLK--IVDE--TPPVKVSINNPVVKALMRALLK-QNIKP 284 (346)
T ss_pred cccCCceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEe--eccC--CCCcccCCCCHHHHHHHHHHHH-hCCCc
Confidence 9999999999999999999999999999998875 2333 2211 1122334579999999999998 48765
Q ss_pred ccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 409 YRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 409 ~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
.+...+|++|++++.+..|.++ .+||+.. ..+|++|||++++++.+++++|+.++.+|+++
T Consensus 285 --~~~~~~g~tD~~~~~~~~~~~v-~fGpg~~-----~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 285 --RLVRKAGTSDMNILQKITTSIA-TYGPGNS-----MLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred --eEEecCCcCcHHHHHHhCCCEE-EECCCCc-----ccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 2456788999999987655443 4788764 36999999999999999999999999999875
No 28
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=1e-46 Score=398.33 Aligned_cols=375 Identities=14% Similarity=0.127 Sum_probs=286.9
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCCh------HHHHHHHHHHHHhCCCceEec--CCCceEEEEEcC-C-CC
Q 011407 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQE------FETSRLLRAELDRMEIGYKYP--LAKTGIRAWVGT-G-GP 153 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E------~~~a~~l~~~L~~~G~~v~~~--~~~~nvia~~g~-~-~~ 153 (486)
++++.+++ ++.++++++++++|++|||+|+++ .++++||.++|+++||+++.. .+++|+++++++ + .+
T Consensus 5 ~~~~~~~~--~~~~~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~ 82 (464)
T PRK09104 5 LDPVLDHI--DANLDASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDA 82 (464)
T ss_pred HHHHHHHH--HHhHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 55789999 889999999999999999999764 689999999999999998753 356899999853 3 36
Q ss_pred cEEEEEeccCcccCcCCCCC---cccc-cCCC-----eeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCC
Q 011407 154 PFVALRADMDALPIQEAVEW---EYKS-KVAG-----KMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAE 221 (486)
Q Consensus 154 ~~ill~gH~DtVP~~~~~~~---p~~~-~~dG-----~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dE 221 (486)
|+|+|+||+||||+++.+.| ||.+ .++| ++||||+. |++++++.|+++|++.+.+++++|.|+|++||
T Consensus 83 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dE 162 (464)
T PRK09104 83 PHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEE 162 (464)
T ss_pred CEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECcc
Confidence 99999999999999764444 6766 3343 59999984 99999999999999987788999999999999
Q ss_pred CCcC-cHHHHHHcCC-CccccEEEEEecCCCCC-ceeEEeccCcccceeeEEEEEEEe--ecCCCCC-CCCCCcHHHHHH
Q 011407 222 EAGN-GAKRMMADGA-LEDVEAIFAVHVSHEHP-TGVIGSRPGPLLAGCGFFHAVISG--KKGGAAN-PHRSVDPVLAAS 295 (486)
Q Consensus 222 E~g~-G~~~l~~~g~-~~~~d~~i~~~~~~~~p-~g~i~~~~G~~~ag~~~~~i~v~G--~~~Ha~~-p~~G~nAi~~a~ 295 (486)
|+|+ |...++.+.. ...+|++|+.+++...+ ...+.+ +.+ |..+++|+++| +++|||. |+.|.||+..++
T Consensus 163 E~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i~~--~~k--G~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~ 238 (464)
T PRK09104 163 ESGSPSLVPFLEANAEELKADVALVCDTGMWDRETPAITT--SLR--GLVGEEVTITAADRDLHSGLFGGAAANPIRVLT 238 (464)
T ss_pred ccCCccHHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEEEe--ecC--CeEEEEEEEEeCCCCccccccCCccCCHHHHHH
Confidence 9987 7877776522 12579999888642111 112322 322 88999999999 6899997 789999999999
Q ss_pred HHHHHHHhhhhcc------------------------------------cCC------------CCCeEEEEEEEecCc-
Q 011407 296 AAVISLQGLVSRE------------------------------------ANP------------LDSQVVSVTYFNGGD- 326 (486)
Q Consensus 296 ~~i~~L~~l~~~~------------------------------------~~~------------~~~~~~~v~~i~gG~- 326 (486)
+++.+|++...+. ..+ ...+++|++.|+||.
T Consensus 239 ~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~ 318 (464)
T PRK09104 239 RILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYT 318 (464)
T ss_pred HHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCC
Confidence 9999987531100 000 013578999999885
Q ss_pred ---cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 011407 327 ---HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDL 403 (486)
Q Consensus 327 ---~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~ 403 (486)
..|+||++|++++|+|++|+++.+++.++|++++++.. ..+.++++.... ..++...+.++++++.+.++++++
T Consensus 319 ~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~ 395 (464)
T PRK09104 319 GEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHDHG--GSPAIALPYDSPALAAAKAALSDE 395 (464)
T ss_pred CCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEecC--CCCceECCCCCHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999998631 123334443221 112233556899999999999999
Q ss_pred cCCCcccccCCCcccc-hHHHHHh--hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHH
Q 011407 404 LGPMNYRVVPPMMGAE-DFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 475 (486)
Q Consensus 404 ~G~~~~~~~~~~~g~t-D~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l 475 (486)
+|.++. .....|++ |++.|.. .+|++. +|||... ..+|++||++++++|.+++++|+.++.+++
T Consensus 396 ~~~~~~--~~~~~g~~~~~~~~~~~~gip~v~--~g~G~~~----~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 396 WGKPAV--LIGSGGSIPIVGDFKRILGMDSLL--VGFGLDD----DRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred hCCCce--ecCCCCcHHHHHHHHHHhCCCEEE--ecCCCCC----CCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 887653 23334443 3566654 477764 5776432 469999999999999999999999998886
No 29
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=2.5e-47 Score=390.83 Aligned_cols=339 Identities=19% Similarity=0.239 Sum_probs=270.1
Q ss_pred HHHHHhhhCCCCCCCh-HHHHHHHHHHHHhCCCceEecC-----CCceEEEEEcCCCCcEEEEEeccCcccCcCC--CCC
Q 011407 102 SVRRTIHQNPELAFQE-FETSRLLRAELDRMEIGYKYPL-----AKTGIRAWVGTGGPPFVALRADMDALPIQEA--VEW 173 (486)
Q Consensus 102 ~ll~~lv~iPs~s~~E-~~~a~~l~~~L~~~G~~v~~~~-----~~~nvia~~g~~~~~~ill~gH~DtVP~~~~--~~~ 173 (486)
+++++|++|||++++| .++++||.++|+++|++++... .++|+++.+++.++|+|+|+||+||||+++. +..
T Consensus 1 ~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~~~w~~~ 80 (364)
T TIGR01892 1 EILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDDAAWTRD 80 (364)
T ss_pred ChHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCCCcCCCC
Confidence 4689999999999865 7999999999999999987532 3689999996533689999999999998652 345
Q ss_pred cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecC
Q 011407 174 EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVS 248 (486)
Q Consensus 174 p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~ 248 (486)
||.+ +++|++||||+. |+++++|+|++.|++. +++++|.|+|++|||.|+ |++.+++++.+ .+|++++.+++
T Consensus 81 Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~ep~ 157 (364)
T TIGR01892 81 PFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIGEPT 157 (364)
T ss_pred CCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEECCCC
Confidence 7775 568999999973 9999999999999875 468899999999999986 99999998754 57888865543
Q ss_pred CCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhccc-----CC--CCCeEEEEEE
Q 011407 249 HEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA-----NP--LDSQVVSVTY 321 (486)
Q Consensus 249 ~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~-----~~--~~~~~~~v~~ 321 (486)
+...+. +. .|..+++|+++|+++|++.|+.|+||+..+++++.+|+++..... .+ ...++++++.
T Consensus 158 -----~~~~~~-~~--~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (364)
T TIGR01892 158 -----RLIPVR-AH--KGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIGV 229 (364)
T ss_pred -----CceeEE-ee--ceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEee
Confidence 322221 22 278899999999999999999999999999999999987642211 01 1236899999
Q ss_pred EecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHh-hcCceeEEEEecCCCCCCCC--CCCCHHHHHHHHH
Q 011407 322 FNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQAR-VFRCSATVDFFDKGNTVYPP--TVNDEDMYEHVKK 398 (486)
Q Consensus 322 i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~--~~~d~~~v~~l~~ 398 (486)
|+||...|+||++|++.+|+|++|.++.+++.++|++++++.+. ..+++++++... .+++ ..+++++++.+++
T Consensus 230 i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~~v~~~~~ 305 (364)
T TIGR01892 230 IQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEVVS----TDPGVNTEPDAELVAFLEE 305 (364)
T ss_pred eecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEEcc----CCCCcCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999988653 446667666542 2223 3457888888875
Q ss_pred HHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHH
Q 011407 399 VAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATI 470 (486)
Q Consensus 399 a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~ 470 (486)
+ +|.++ ...++++|+.++.. ++|++. +||+.. ..+|++||+++++++.+++++|+.+
T Consensus 306 ~----~~~~~----~~~~~~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 306 L----SGNAP----EVVSYGTEAPQFQELGAEAVV--CGPGDI-----RQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred H----hCCCC----ceecccccHHHHHhCCCcEEE--ECCCCh-----HhCCCCCceeeHHHHHHHHHHHHHh
Confidence 4 34432 23566899998876 388754 688753 3599999999999999999999876
No 30
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=1.2e-46 Score=387.00 Aligned_cols=350 Identities=14% Similarity=0.146 Sum_probs=275.8
Q ss_pred cchHHHHHHHHHHhhhCCCCCCChH---HHHHHHHHHHHhCCCceEecC---C-CceEEEEEcC-C-CCcEEEEEeccCc
Q 011407 94 PETVDWLKSVRRTIHQNPELAFQEF---ETSRLLRAELDRMEIGYKYPL---A-KTGIRAWVGT-G-GPPFVALRADMDA 164 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~~E~---~~a~~l~~~L~~~G~~v~~~~---~-~~nvia~~g~-~-~~~~ill~gH~Dt 164 (486)
+..++++++++++|++|||++++|. ++++||.++|+++|++++... + ..|+++++++ + .+|+|+|+||+||
T Consensus 7 ~~~~~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~Dt 86 (376)
T PRK07473 7 PFDSEAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDT 86 (376)
T ss_pred CcCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCC
Confidence 3447899999999999999999886 678899999999999988643 2 2478998853 2 3689999999999
Q ss_pred ccC-cCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccc
Q 011407 165 LPI-QEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDV 239 (486)
Q Consensus 165 VP~-~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~ 239 (486)
||+ +.++.+||. +++|++||||+. |+++++|.|+++|++.+..++++|.|+|++|||.|+ |++.+++++.. ..
T Consensus 87 V~~~~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~ 164 (376)
T PRK07473 87 VHPVGTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RN 164 (376)
T ss_pred CCCCCCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cC
Confidence 964 445566775 678999999984 899999999999999887888899999999999987 99999987543 57
Q ss_pred cEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCC-CCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEE
Q 011407 240 EAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVS 318 (486)
Q Consensus 240 d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~-~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~ 318 (486)
|++|+.+++. ..+.+.. +.. |..+++|+++|+++|++ .|+.|+||+..+++++.+|+++.. ...+++
T Consensus 165 d~~iv~ep~~--~~~~v~~--~~~--G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~ 232 (376)
T PRK07473 165 KYVLVPEPGR--PDNGVVT--GRY--AIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFS 232 (376)
T ss_pred CEEEEeCCCC--CCCCEEE--ECe--eeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEe
Confidence 9999988753 1122221 222 88899999999999997 599999999999999999998742 135789
Q ss_pred EEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCC--C-CHHHHHH
Q 011407 319 VTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTV--N-DEDMYEH 395 (486)
Q Consensus 319 v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~--~-d~~~v~~ 395 (486)
++.|+||.+.|+||++|++.+++|....+..+++.+++.+.++. ..+++++++.. ...++.. . ++++++.
T Consensus 233 vg~i~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~ 305 (376)
T PRK07473 233 VGIVHGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSGT---EDDVTFTVTRG----VTRPVWEPDAGTMALYEK 305 (376)
T ss_pred EeeEEcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhCc---CCCeEEEEEcc----ccCCCCCCChhHHHHHHH
Confidence 99999999999999999999999988887777777777666542 23444444322 1123332 2 3468888
Q ss_pred HHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 396 VKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 396 l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
++++.+. +|.++ ....+++++|+++++. .+|++. .+||+.. ++|++||+++++++.+++++|+.++.++
T Consensus 306 ~~~~~~~-~g~~~--~~~~~~g~tDa~~~~~~giP~v~-g~Gpg~~------~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 306 ARAIAGQ-LGLSL--PHGSAGGGSDGNFTGAMGIPTLD-GLGVRGA------DYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred HHHHHHH-cCCCC--ccccCccccHhhhHHhcCCCEEE-eccCCCC------CCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 8887766 68764 2456788999998876 488864 3688753 5899999999999999999999998653
No 31
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-47 Score=402.37 Aligned_cols=364 Identities=14% Similarity=0.194 Sum_probs=279.4
Q ss_pred cchHHHHHHHHHHhhhCCCCCCChH---------HHHHHHHHHHHhCCCceEec-CCCceEEEEE-cCCCC-cEEEEEec
Q 011407 94 PETVDWLKSVRRTIHQNPELAFQEF---------ETSRLLRAELDRMEIGYKYP-LAKTGIRAWV-GTGGP-PFVALRAD 161 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~~E~---------~~a~~l~~~L~~~G~~v~~~-~~~~nvia~~-g~~~~-~~ill~gH 161 (486)
....+++++++++|++|||+|++|. ++++||.++|+.+|++++.. .++.|+++.+ |++++ |+|+|+||
T Consensus 40 ~~~~~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH 119 (486)
T PRK08262 40 AVDEDAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAH 119 (486)
T ss_pred cCCHHHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECc
Confidence 3468889999999999999998763 48999999999999976643 2346888877 54444 89999999
Q ss_pred cCcccCcCC--CCC---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHH
Q 011407 162 MDALPIQEA--VEW---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMM 231 (486)
Q Consensus 162 ~DtVP~~~~--~~~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~ 231 (486)
+||||+++. ..| ||.+ +++|++||||+. |+++++|.|++.|++.+.+++++|.|+|++|||+|+ |++.++
T Consensus 120 ~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~ 199 (486)
T PRK08262 120 QDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIA 199 (486)
T ss_pred ccccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHH
Confidence 999998653 345 7877 468999999973 999999999999999888899999999999999987 988877
Q ss_pred Hc----CCCccccEEE------EEe--cCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHH
Q 011407 232 AD----GALEDVEAIF------AVH--VSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVI 299 (486)
Q Consensus 232 ~~----g~~~~~d~~i------~~~--~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~ 299 (486)
+. +. ..|+++ ..+ ++...|++.+.+. ..|..+++|+++|+++|++.|+. .||+..++++|.
T Consensus 200 ~~l~~~~~--~~~~~~~~~~~i~~~~~~~~~~p~~~i~~~----~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~ 272 (486)
T PRK08262 200 ELLKERGV--RLAFVLDEGGAITEGVLPGVKKPVALIGVA----EKGYATLELTARATGGHSSMPPR-QTAIGRLARALT 272 (486)
T ss_pred HHHHHhcC--CEEEEEeCCceecccccCCCCceEEeeEEe----eeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHH
Confidence 53 22 344443 111 1123455544332 23888999999999999999998 999999999999
Q ss_pred HHHhhhhc----------------c----------------------------cCCCCCeEEEEEEEecCccCccccCeE
Q 011407 300 SLQGLVSR----------------E----------------------------ANPLDSQVVSVTYFNGGDHLDMIPDAV 335 (486)
Q Consensus 300 ~L~~l~~~----------------~----------------------------~~~~~~~~~~v~~i~gG~~~nvIP~~a 335 (486)
+|++...+ . ......++++++.|+||...|+||++|
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a 352 (486)
T PRK08262 273 RLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRA 352 (486)
T ss_pred HHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCcc
Confidence 99864100 0 001234688999999999999999999
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCC
Q 011407 336 VIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPM 415 (486)
Q Consensus 336 ~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~ 415 (486)
++++|+|++|+++.+++.++|++++++. + +++++......+.+....++++++.+++++++++|.... .+..+
T Consensus 353 ~~~~diR~~p~~~~~~i~~~i~~~~~~~----~--~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~ 425 (486)
T PRK08262 353 TATVNFRILPGDSVESVLAHVRRAVADD----R--VEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLV 425 (486)
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHhccC----c--eEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-cccee
Confidence 9999999999999999999999998762 3 444443211112334556899999999999998874222 23456
Q ss_pred cccchHHHHHhhcCccEEE----EccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 416 MGAEDFSFYSEVVPAAFYY----IGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 416 ~g~tD~~~~~~~~p~~~~~----~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
.+++|++++...+|.++.+ +||++ ...+|++||+++++++.+++++|..++.+++.
T Consensus 426 ~g~tDa~~~~~~~p~~~~~~~~~~gpg~-----~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 426 VGATDSRHYSGISDNVYRFSPLRLSPED-----LARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred cccccHHHHHHhcCCeEEECCccCCccc-----ccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 7899999998766654432 23332 24699999999999999999999999998864
No 32
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.2e-46 Score=383.22 Aligned_cols=338 Identities=15% Similarity=0.103 Sum_probs=272.3
Q ss_pred HHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCC--CceEEEEEcCCCCcEEEEEeccCcccCcCCCCCcc
Q 011407 98 DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLA--KTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEY 175 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~--~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p~ 175 (486)
+++++++++|++|||+|++|.++++||.++|+++||+++.... ..|+++ +++|+|+|+|||||||++. .|+
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~---~~~ 74 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRA---EFF 74 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCC---CCE
Confidence 5789999999999999999999999999999999999876432 456665 3358999999999999742 122
Q ss_pred cccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCC
Q 011407 176 KSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEH 251 (486)
Q Consensus 176 ~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~ 251 (486)
.++|++||||+. |+++++|.|++.|++.. .+++|.|+|++|||.|+ |++.++++. ..|++++.+|+.
T Consensus 75 --~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~ep~~-- 145 (347)
T PRK08652 75 --VDGVYVYGTGACDAKGGVAAILLALEELGKEF--EDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLEPTD-- 145 (347)
T ss_pred --EECCEEEeccchhhhHHHHHHHHHHHHHhhcc--cCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEecCCC--
Confidence 468999999984 89999999999998543 46799999999999886 999988762 358999888642
Q ss_pred CceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccc
Q 011407 252 PTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMI 331 (486)
Q Consensus 252 p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvI 331 (486)
+.+.+ +. .|..+++|+++|+++|++.|+.|+||+..+++++.+|+++......... .+.+++.+.||...|+|
T Consensus 146 --~~i~~--~~--~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~-~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 146 --LKVAI--AH--YGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYFD-PHIGIQEIIGGSPEYSI 218 (347)
T ss_pred --Cceee--ec--ccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcccC-CCCcceeeecCCCCCcc
Confidence 22322 22 2888999999999999999999999999999999999887533221111 24667789999999999
Q ss_pred cCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccc
Q 011407 332 PDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRV 411 (486)
Q Consensus 332 P~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~ 411 (486)
|++|++.+|+|++|.++.+++.++|++++++ .+++++++.. .+ .....+|+++++.+++++++. |.++ .
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~~---~~-~~~~~~~~~lv~~l~~a~~~~-g~~~--~ 287 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTEI---WD-GFELDEDEEIVQLLEKAMKEV-GLEP--E 287 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEecc---CC-cccCCCCCHHHHHHHHHHHHh-CCCC--C
Confidence 9999999999999999999999999999865 3444443322 12 223456899999999999997 8765 3
Q ss_pred cCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 412 VPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 412 ~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+..+.|++|++++... +|++. +||+.. ..+|++|||++++++.+++++|..++.+||.
T Consensus 288 ~~~~~g~tDa~~~~~~gip~v~--~Gpg~~-----~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 288 FTVMRSWTDAINFRYNGTKTVV--WGPGEL-----DLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred cCcCCccchhHHHHHCCCCEEE--ECCCch-----hhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 4567889999998764 88754 688753 3699999999999999999999999999885
No 33
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=7.4e-46 Score=392.13 Aligned_cols=381 Identities=12% Similarity=0.038 Sum_probs=286.3
Q ss_pred ccchhhHHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCC---hHHHHHHHH----HHHHhCCCceEec-----CCCceEE
Q 011407 78 VWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQ---EFETSRLLR----AELDRMEIGYKYP-----LAKTGIR 145 (486)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~---E~~~a~~l~----~~L~~~G~~v~~~-----~~~~nvi 145 (486)
|+.+.+++.+.+++ ++ +++++++++|++|||+|++ +.++++||. ++|+++||+++.. .+++||+
T Consensus 1 ~~~~~~~~~~~~~~--~~--~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vv 76 (469)
T PRK07079 1 MTREAAIARAAAYF--DS--GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLI 76 (469)
T ss_pred CcHHHHHHHHHHhh--cc--HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEE
Confidence 34566778888888 64 5899999999999999974 456777764 5899999998753 2468999
Q ss_pred EEEcCC-CCcEEEEEeccCcccCcC--CC--CCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhc-CCCCCceEEE
Q 011407 146 AWVGTG-GPPFVALRADMDALPIQE--AV--EWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSR-EHLLKGTVIL 215 (486)
Q Consensus 146 a~~g~~-~~~~ill~gH~DtVP~~~--~~--~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~-g~~l~~~I~~ 215 (486)
++++++ ++|+|+|+||+||||+++ |+ ..||.+ ++||++||||+. |+++++++|+++|++. +.+++++|.|
T Consensus 77 a~~~~~~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~ 156 (469)
T PRK07079 77 AERIEDDALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKL 156 (469)
T ss_pred EEeCCCCCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 998543 468999999999999754 44 368887 578999999995 9999999999998754 4788999999
Q ss_pred EeecCCCCcC-cHHHHHHcCC-CccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEee--cCCCCCCCCC--Cc
Q 011407 216 IFQPAEEAGN-GAKRMMADGA-LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGK--KGGAANPHRS--VD 289 (486)
Q Consensus 216 ~~~~dEE~g~-G~~~l~~~g~-~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~--~~Ha~~p~~G--~n 289 (486)
+|++|||+|+ |++.++++.. ...+|++|+.+++...+.. ..+..|.+ |..+++|+++|+ +.||+ ++.| .|
T Consensus 157 ~~~~dEE~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~~~-~~i~~g~k--G~~~~~v~v~G~~~~~hs~-~~~g~~~n 232 (469)
T PRK07079 157 LIEMGEEIGSPGLAEVCRQHREALAADVLIASDGPRLSAER-PTLFLGSR--GAVNFRLRVNLRDGAHHSG-NWGGLLRN 232 (469)
T ss_pred EEECccccCCccHHHHHHHhHHhcCCCEEEEeCCCccCCCC-eEEEEecc--eEEEEEEEEeeCCCCCCCC-ccccccCC
Confidence 9999999998 9999998742 1147999988764322111 11222333 899999999998 44666 4444 69
Q ss_pred HHHHHHHHHHHHHhhhhcc------------------------c--------------------CCCCCeEEEEEEEecC
Q 011407 290 PVLAASAAVISLQGLVSRE------------------------A--------------------NPLDSQVVSVTYFNGG 325 (486)
Q Consensus 290 Ai~~a~~~i~~L~~l~~~~------------------------~--------------------~~~~~~~~~v~~i~gG 325 (486)
|+..++++|.++.+...+. . ......++|++.|+||
T Consensus 233 ai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG 312 (469)
T PRK07079 233 PGTVLAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTG 312 (469)
T ss_pred HHHHHHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecC
Confidence 9999999999885421000 0 0011247899999999
Q ss_pred c---cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH
Q 011407 326 D---HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAID 402 (486)
Q Consensus 326 ~---~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~ 402 (486)
. ..|+||++|++++|+|++|+++.+++.++|++++++... ..+++++... ........++++++.+.+++++
T Consensus 313 ~~~~~~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~~---~~v~~~~~~~--~~p~~~~~~~~~v~~l~~a~~~ 387 (469)
T PRK07079 313 NPDAPVNAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHGF---PMVEVTVERG--SPATRLDPDDPWVRWALASIAR 387 (469)
T ss_pred CCCCcceEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcCC---CCeEEEEeCC--CCceecCCCCHHHHHHHHHHHH
Confidence 4 689999999999999999999999999999999987321 1355555421 1111245689999999999999
Q ss_pred hcCCCcccccCCCcccchHHHHHh--hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhc
Q 011407 403 LLGPMNYRVVPPMMGAEDFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 478 (486)
Q Consensus 403 ~~G~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~ 478 (486)
++|.++.. .....+++|.++|.. ++|+++ +|++.++ ..+|++||+++++++.+++++|+.++.++++..
T Consensus 388 ~~g~~~~~-~~~~~g~~d~~~~~~~~giP~v~--~g~~~~~----~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~~ 458 (469)
T PRK07079 388 TTGKKPAL-LPNLGGSLPNDVFADILGLPTLW--VPHSYPA----CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQG 458 (469)
T ss_pred HhCCCCce-ecCCCcchhHHHHHHHhCCCEEE--ecCCCCC----ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 88876531 233456678877764 488874 3554332 248999999999999999999999999998764
No 34
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.9e-46 Score=379.62 Aligned_cols=334 Identities=18% Similarity=0.214 Sum_probs=266.4
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC-CCceEecCCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCCc
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM-EIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWE 174 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~-G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p 174 (486)
+.+++++++++|++|||+|++|.++++||.++|+++ |+++... +.|++++++++.+++|+|+||+||||+++ |
T Consensus 5 ~~~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~----~ 78 (352)
T PRK13007 5 LAADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD----N 78 (352)
T ss_pred hHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC----C
Confidence 568899999999999999999999999999999996 8887653 47999998655456899999999999864 4
Q ss_pred ccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC---cHHHHHHcC-CCccccEEEEEe
Q 011407 175 YKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN---GAKRMMADG-ALEDVEAIFAVH 246 (486)
Q Consensus 175 ~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~---G~~~l~~~g-~~~~~d~~i~~~ 246 (486)
|++ .+||++||||+. ++++++|.|+++|. +++++|.|+|++|||.++ |+..++... .+.++|++++.+
T Consensus 79 ~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~e 154 (352)
T PRK13007 79 LPSRREGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLE 154 (352)
T ss_pred CCcceeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEec
Confidence 544 568999999994 89999999999984 478899999999999863 788887653 234689999888
Q ss_pred cCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCC---CCCeEEEEEEEe
Q 011407 247 VSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANP---LDSQVVSVTYFN 323 (486)
Q Consensus 247 ~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~---~~~~~~~v~~i~ 323 (486)
++. +.+. .|.. |..+++|+++|+++|+|.|+.|+||+..+++++.+|+++..+.... ....+++++.|+
T Consensus 155 p~~----~~i~--~~~~--G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~ 226 (352)
T PRK13007 155 PTD----GVIE--AGCQ--GTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRIS 226 (352)
T ss_pred CCC----CceE--eecc--ceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEe
Confidence 642 1222 2222 7889999999999999999999999999999999998875332111 112478999999
Q ss_pred cCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 011407 324 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDL 403 (486)
Q Consensus 324 gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~ 403 (486)
||.+.|+||++|++++|+|++|+++.+++.++|++++++.. ++++... .+++ ....++++++.+.++
T Consensus 227 gG~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~-------~~~~~~~-~~~~-~~~~~~~~~~~~~~~---- 293 (352)
T PRK13007 227 GGVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGFA-------EVEVTDL-APGA-RPGLDHPAAAALVAA---- 293 (352)
T ss_pred cCCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhcccc-------EEEeecc-cCCC-CCCCCCHHHHHHHHH----
Confidence 99999999999999999999999999999999999887521 3433321 1222 234588888888876
Q ss_pred cCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHH
Q 011407 404 LGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIA 471 (486)
Q Consensus 404 ~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i 471 (486)
+|.++ ....|++|+++++.. +|++. +||+.. ..+|++||+++++++.+++++|+.++
T Consensus 294 ~g~~~----~~~~g~td~~~~~~~Gip~v~--~Gpg~~-----~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 294 VGGEV----RAKYGWTDVARFSALGIPAVN--FGPGDP-----ALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred hCCCC----ccccccchHHHHHhCCCCEEE--eCCCch-----hhccCCCCceEHHHHHHHHHHHHHHh
Confidence 35432 345788999998764 88764 688764 36999999999999999999998875
No 35
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=6.7e-46 Score=379.97 Aligned_cols=339 Identities=19% Similarity=0.181 Sum_probs=278.0
Q ss_pred HHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC------CCceEEEEEc-CCCCcEEEEEeccCcccCcCCCC
Q 011407 100 LKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL------AKTGIRAWVG-TGGPPFVALRADMDALPIQEAVE 172 (486)
Q Consensus 100 l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~------~~~nvia~~g-~~~~~~ill~gH~DtVP~~~~~~ 172 (486)
+++++++|++|||++++|.++++||+++|+++||+++... +++|++++++ ++++|+|+|+||+||||+++
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~--- 78 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA--- 78 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC---
Confidence 6789999999999999999999999999999999987643 3789999994 33458999999999999743
Q ss_pred Ccccc-cCCCeeeecCc-----h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEE
Q 011407 173 WEYKS-KVAGKMHACGH-----D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIF 243 (486)
Q Consensus 173 ~p~~~-~~dG~l~GrG~-----~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i 243 (486)
+|.+ +++|++||||+ | ++++++|.+++.|++.+ .++++|.|+|++|||.|+ |++.+.+.+. ..|+++
T Consensus 79 -~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~ 154 (361)
T TIGR01883 79 -GPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGY 154 (361)
T ss_pred -CCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeE
Confidence 3444 56789999997 6 88999999999998876 578999999999999987 9988876532 357777
Q ss_pred EEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCC-CCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEE
Q 011407 244 AVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYF 322 (486)
Q Consensus 244 ~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~-~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i 322 (486)
+.+++. +.+.+... . .|..+++|+++|+++|++ .|+.|+||+..+++++.+|+... .. ...+++++.+
T Consensus 155 ~~~~~~--~~~~i~~~--~--~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~---~~--~~~~~~i~~i 223 (361)
T TIGR01883 155 CLDAPG--EVGNIQLA--A--PTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR---ID--EETTANIGSF 223 (361)
T ss_pred EEeCCC--CcceEEec--C--CceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC---CC--Ccccccccee
Confidence 766532 23444332 2 278899999999999986 59999999999999999987531 11 2356889999
Q ss_pred ecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCC--CCCCHHHHHHHHHHH
Q 011407 323 NGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP--TVNDEDMYEHVKKVA 400 (486)
Q Consensus 323 ~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~--~~~d~~~v~~l~~a~ 400 (486)
+||...|+||++|++.+|+|..|..+.+.+.++|++.++..+..+++++++++.. .+++ ...++++++.+++++
T Consensus 224 ~gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lv~~l~~a~ 299 (361)
T TIGR01883 224 SGGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEETRL----IYEGFKIHPQHPLMNIFKKAA 299 (361)
T ss_pred ecCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEEe----ccccccCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998887778887776542 2333 345789999999999
Q ss_pred HHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHH
Q 011407 401 IDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIA 471 (486)
Q Consensus 401 ~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i 471 (486)
++ +|.++. ...++|++|+++++. .+|++. +||+.. .+|++||+++++++..++++|..++
T Consensus 300 ~~-~g~~~~--~~~~~g~tD~~~~~~~giP~v~--~G~g~~------~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 300 KK-IGLKTS--EIFSGGGSDANVLNEKGVPTVN--LSAGYV------HAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred HH-cCCCcE--EEecCcccHHHHHhhCCCceEE--ECCCcc------cCcCcceeEEHHHHHHHHHHHHHHh
Confidence 98 687653 356678999999985 588875 577753 5999999999999999999998875
No 36
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=4.9e-46 Score=392.32 Aligned_cols=362 Identities=12% Similarity=0.024 Sum_probs=273.8
Q ss_pred HHHHhcCcchHHHHHHHHHHhhhCCCCCC------------ChHHHHHHHHHHHHhCCCceEecCCCceEEEEE-cCCCC
Q 011407 87 VMELARRPETVDWLKSVRRTIHQNPELAF------------QEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV-GTGGP 153 (486)
Q Consensus 87 i~~~~~~~~~~~~l~~ll~~lv~iPs~s~------------~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~-g~~~~ 153 (486)
+.+++ +++++++++++++|++|||++. ++.++++++.++|+++||+++..+ |+++.+ +++++
T Consensus 4 ~~~~i--~~~~~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~ 78 (466)
T TIGR01886 4 FKEEV--EARKDALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGD 78 (466)
T ss_pred HHHHH--HHhHHHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCC
Confidence 56677 8889999999999999999974 346789999999999999987643 443433 22236
Q ss_pred cEEEEEeccCcccCcC-CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cH
Q 011407 154 PFVALRADMDALPIQE-AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GA 227 (486)
Q Consensus 154 ~~ill~gH~DtVP~~~-~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~ 227 (486)
|+|+|+||+||||+++ |+.+||.+ ++||++||||+. |++++++.|+++|++.+.+++++|.|+|++|||+|+ |+
T Consensus 79 ~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~ 158 (466)
T TIGR01886 79 ERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDM 158 (466)
T ss_pred CEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccH
Confidence 8999999999999864 56668887 578999999984 889999999999999999999999999999999997 99
Q ss_pred HHHHHcCCCccccEEEEEecCC----CCCcee---EEec-----------------------------cC----------
Q 011407 228 KRMMADGALEDVEAIFAVHVSH----EHPTGV---IGSR-----------------------------PG---------- 261 (486)
Q Consensus 228 ~~l~~~g~~~~~d~~i~~~~~~----~~p~g~---i~~~-----------------------------~G---------- 261 (486)
.++++++. .+|++++.+... +++... +..+ .+
T Consensus 159 ~~~~~~~~--~~d~~~~~d~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~ 236 (466)
T TIGR01886 159 DYYFKHEE--TPDFGFSPDAEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAY 236 (466)
T ss_pred HHHHhcCc--CCCEEEECCCCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHH
Confidence 99998765 367765433210 011000 0000 00
Q ss_pred ---ccccee---------eEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHH-------------Hhhhh----------
Q 011407 262 ---PLLAGC---------GFFHAVISGKKGGAANPHRSVDPVLAASAAVISL-------------QGLVS---------- 306 (486)
Q Consensus 262 ---~~~ag~---------~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L-------------~~l~~---------- 306 (486)
....|. .|++|+++|+++|+|.|+.|+|||..|++++..+ .++..
T Consensus 237 ~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 316 (466)
T TIGR01886 237 ESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGI 316 (466)
T ss_pred HHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCCC
Confidence 000121 2789999999999999999999999999988873 22110
Q ss_pred -cccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCC
Q 011407 307 -REANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP 385 (486)
Q Consensus 307 -~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~ 385 (486)
.....++..++|+|.|+||.. | ++|++.+|+|++|+++.+++.++|++.++.. +++++......++ .
T Consensus 317 ~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~~-------~~v~~~~~~~~P~-~ 384 (466)
T TIGR01886 317 AFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGGI-------VDVTYNGHFEEPH-Y 384 (466)
T ss_pred cccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhcc-------cEEEEecccCCCc-c
Confidence 011224567899999999965 4 8999999999999999999999999988741 3333321011222 2
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHH
Q 011407 386 TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAA 465 (486)
Q Consensus 386 ~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~ 465 (486)
...++++++.+.+++++++|.++. +..++++||+++|...+|.. .+||+.. .++|++||++++++|.++++
T Consensus 385 ~~~ds~lv~~l~~a~~~v~G~~~~--~~~~~ggTDa~~~~~~i~~g--v~gPG~~-----~~aH~~dE~V~i~el~~a~~ 455 (466)
T TIGR01886 385 VPGSDPLVQTLLKVYEKHTGKKGH--EVIIGGGTYGRLLERGVAYG--AMFEGGP-----DVMHQANEFMMLDDLILAAA 455 (466)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCc--eeeecCccHHHhcccccccc--cccCCCC-----CCccCCCcceEHHHHHHHHH
Confidence 345789999999999999887652 45688999999997655543 3578764 46999999999999999999
Q ss_pred HHHHHHHHHHh
Q 011407 466 VHATIAERFLN 476 (486)
Q Consensus 466 i~~~~i~~~l~ 476 (486)
+|+.++.+|+.
T Consensus 456 iy~~~i~~l~~ 466 (466)
T TIGR01886 456 IYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHhC
Confidence 99999999873
No 37
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=1.1e-45 Score=376.50 Aligned_cols=336 Identities=17% Similarity=0.148 Sum_probs=266.1
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCCcc
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEY 175 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p~ 175 (486)
+.+++++++++|++|||++++|.++++||.++|+++||+++... ..|++++++++ +|+|+|+||+||||.. .||
T Consensus 4 ~~~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~i~~~~~~-~~~l~~~~H~DtVp~~----~p~ 77 (348)
T PRK04443 4 SALEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVDE-AGNARGPAGDG-PPLVLLLGHIDTVPGD----IPV 77 (348)
T ss_pred chHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEcCCC-CCEEEEEeeccccCCC----CCc
Confidence 45789999999999999999999999999999999999987643 46899998544 5899999999999952 244
Q ss_pred cccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCC
Q 011407 176 KSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEH 251 (486)
Q Consensus 176 ~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~ 251 (486)
. +++|++||||+. |++++++.|+++| +.+++++|.|++++|||.|+ |...++.++. .+|++++.+|+..
T Consensus 78 ~-~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~Ept~~- 150 (348)
T PRK04443 78 R-VEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGEPSGW- 150 (348)
T ss_pred E-eeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeCCCCc-
Confidence 2 468999999985 8999999999998 45789999999999999987 6666666654 5899998876431
Q ss_pred CceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhc---ccCCCCCeEEEEEEEecCccC
Q 011407 252 PTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR---EANPLDSQVVSVTYFNGGDHL 328 (486)
Q Consensus 252 p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~---~~~~~~~~~~~v~~i~gG~~~ 328 (486)
+.+.+ |.+ |..+++|+++|+++|||.| |+||+..|++++..|+++... ....+...+.+++.|+ ...
T Consensus 151 --~~i~~--~~k--G~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~ 220 (348)
T PRK04443 151 --DGITL--GYK--GRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSS 220 (348)
T ss_pred --cceee--ecc--cEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCC
Confidence 11221 222 8889999999999999987 799999999999999876431 1112334567888887 356
Q ss_pred ccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCc
Q 011407 329 DMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMN 408 (486)
Q Consensus 329 nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~ 408 (486)
|+||++|++.+|+|++|+++.+++.++|++++.. +++++... .++ .....++++++.++++++++.+ ++
T Consensus 221 n~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~~--------~~~~~~~~-~~~-~~~~~~~~~~~~l~~~~~~~~~-~~ 289 (348)
T PRK04443 221 DGLTVEAEMTVGLRLPPGLSPEEAREILDALLPT--------GTVTFTGA-VPA-YMVSKRTPLARAFRVAIREAGG-TP 289 (348)
T ss_pred CCCCceEEEEEEEccCCCCCHHHHHHHHHHhCCC--------cEEEEecC-CCc-eecCCCCHHHHHHHHHHHHhcC-Cc
Confidence 9999999999999999999999999999999732 33443311 122 2344688999999999999755 33
Q ss_pred ccccCCCcccchHHHHHh--hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 409 YRVVPPMMGAEDFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 409 ~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
.....+|++|++++.+ .+|++ .+||++. ..+|++||++++++|.+++++|+.++.++
T Consensus 290 --~~~~~~g~tD~~~~~~~~gip~v--~~Gpg~~-----~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 290 --RLKRKTGTSDMNVVAPAWGCPMV--AYGPGDS-----DLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred --ceeccccCCcHHHHhhhcCCCEE--EECCCCc-----cccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 2345678999999875 47776 4688763 36899999999999999999999998653
No 38
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=3.7e-45 Score=379.94 Aligned_cols=350 Identities=17% Similarity=0.157 Sum_probs=274.6
Q ss_pred HHHHHHHHhhhCCCCCC----------ChHHHHHHHHHHHHhCCCceEecCCCceEEEEEc-CCCC-cEEEEEeccCccc
Q 011407 99 WLKSVRRTIHQNPELAF----------QEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG-TGGP-PFVALRADMDALP 166 (486)
Q Consensus 99 ~l~~ll~~lv~iPs~s~----------~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g-~~~~-~~ill~gH~DtVP 166 (486)
++++.+++|++|||+|+ ++.++++||.++|+++|++....++.+||+++++ ++++ |+|+|+||+||||
T Consensus 2 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp 81 (404)
T PRK13381 2 QLTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVD 81 (404)
T ss_pred cHHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCC
Confidence 57889999999999997 4788999999999999996544556789999994 4444 9999999999999
Q ss_pred CcCC--CCC---ccc-------------------c-----cCCCeeeecCc----h---HHHHHHHHHHHHHHhcCCCCC
Q 011407 167 IQEA--VEW---EYK-------------------S-----KVAGKMHACGH----D---AHVAMLIGAAKILKSREHLLK 210 (486)
Q Consensus 167 ~~~~--~~~---p~~-------------------~-----~~dG~l~GrG~----~---g~~a~~l~aa~~L~~~g~~l~ 210 (486)
+++. ..| +|+ | ..+|++||||+ . |+++++|.|+++|++.+ .++
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~ 160 (404)
T PRK13381 82 VGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEH 160 (404)
T ss_pred ccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCC
Confidence 8653 111 122 1 24678999997 3 89999999999998874 468
Q ss_pred ceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCC-CCCCC
Q 011407 211 GTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN-PHRSV 288 (486)
Q Consensus 211 ~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~-p~~G~ 288 (486)
++|.|+|++|||.|+ |++.++.+++ .+|++++.|.+ +|. .+.. +. .|..+++|+++|+++|++. |+.|+
T Consensus 161 g~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~~--~~~-~i~~--~~--~G~~~~~v~v~Gk~aHa~~~p~~g~ 231 (404)
T PRK13381 161 GDIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDCC--ELG-EVVY--EN--FNAASAEITITGVTAHPMSAKGVLV 231 (404)
T ss_pred CCEEEEEEcccccccccHHHHHHhcC--CCCEEEEecCC--Ccc-eEEE--ec--CcceEEEEEEEeEecCCCCCcccCc
Confidence 899999999999986 9999987643 37888877643 343 3322 22 3788999999999999885 89999
Q ss_pred cHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcC
Q 011407 289 DPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFR 368 (486)
Q Consensus 289 nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g 368 (486)
|||..+++++.+|+++..+........+++++.++|+ |++|++.+|+|+.|.++.+++.++|++++++.+..++
T Consensus 232 NAI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~ 305 (404)
T PRK13381 232 NPILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYP 305 (404)
T ss_pred CHHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999876433322222345778877764 8999999999999999999999999999999887776
Q ss_pred -ceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCC
Q 011407 369 -CSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIH 446 (486)
Q Consensus 369 -~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~ 446 (486)
+++++++.............++++++.+++++++ .|.++. ...+++++|+++|.. .+|+++ +||+..
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~giP~v~--~GpG~~------ 374 (404)
T PRK13381 306 TARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKE-LGIEPK--VIPMRGGTDGAALSAKGLPTPN--LFTGAH------ 374 (404)
T ss_pred CcEEEEEEEeCCchhhcccccCHHHHHHHHHHHHH-cCCCee--eccCCccchHHHHhcCCCCeEE--ECcccc------
Confidence 5677665421111112345689999999999987 577653 346778999999975 489876 477753
Q ss_pred CCCCCCCcCCCCchHHHHHHHHHHHHHHH
Q 011407 447 TGHSPYFMIDEDVLPVGAAVHATIAERFL 475 (486)
Q Consensus 447 ~~H~~dE~i~i~~l~~~~~i~~~~i~~~l 475 (486)
.+|++||+++++++.+++++|..++.++.
T Consensus 375 ~aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 375 NFHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred CCcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 49999999999999999999999998764
No 39
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=5.8e-45 Score=374.28 Aligned_cols=333 Identities=17% Similarity=0.136 Sum_probs=252.7
Q ss_pred HHHHhhhCCCCCCChHHHHHHHHHHHHhCCCc-eEecCCCceEEEEEcCCCCcEEEEEeccCcccCcCC--CCC---cc-
Q 011407 103 VRRTIHQNPELAFQEFETSRLLRAELDRMEIG-YKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEA--VEW---EY- 175 (486)
Q Consensus 103 ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~-v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~--~~~---p~- 175 (486)
++++|++|||+|++|.++++||.++|+++|++ ++....+.|++++++++++|+|+|+|||||||+++. ..| ||
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 47899999999999999999999999999653 222112459999985444689999999999998642 234 22
Q ss_pred -------cc-cCCCeeeecCc-h--HHHHHHHHHHHHHHh--cCCCCCceEEEEeecCCCCcC---cHHHHHHcCC-Ccc
Q 011407 176 -------KS-KVAGKMHACGH-D--AHVAMLIGAAKILKS--REHLLKGTVILIFQPAEEAGN---GAKRMMADGA-LED 238 (486)
Q Consensus 176 -------~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~--~g~~l~~~I~~~~~~dEE~g~---G~~~l~~~g~-~~~ 238 (486)
.+ +++|++||||+ | |+++++|+|++.|++ .+..++++|.|+|++|||+++ |+..+++... +.+
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 23 56899999999 4 889999999999954 355789999999999999862 8999888642 235
Q ss_pred ccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhccc---CCCCCe
Q 011407 239 VEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA---NPLDSQ 315 (486)
Q Consensus 239 ~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~---~~~~~~ 315 (486)
+|++|+.+++.. .+ ..|.+ |..+++|+++|+++|++.|+.|+||+..+++++.+|+++..+.. ......
T Consensus 161 ~d~~iv~Ept~~----~i--~~g~~--G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIGEPTGG----GI--EAGCN--GNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEECCCCC----cc--cccce--eeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 799998876531 12 22333 88999999999999999999999999999999999988743211 111236
Q ss_pred EEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHH--------HHhh---cC-ceeEEEEecCCCCCC
Q 011407 316 VVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE--------QARV---FR-CSATVDFFDKGNTVY 383 (486)
Q Consensus 316 ~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~--------~~~~---~g-~~~~v~~~~~~~~~~ 383 (486)
+++++.|+||.+.|+||++|++++|+|+.|+++.+++.++|+++++. .... .+ ..++++.... ...
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 310 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMEDE--AGG 310 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEccc--CCC
Confidence 79999999999999999999999999999999999999999766433 2111 11 1344443210 111
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCC
Q 011407 384 PPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMID 456 (486)
Q Consensus 384 ~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~ 456 (486)
.....+++.++.+.+++++++|.++. ...|+||++++.. ++|++. +||++. .++|++|||++
T Consensus 311 ~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~aH~~dE~v~ 373 (373)
T TIGR01900 311 ALPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALN--FGAGDP-----LFAHKHDEQCP 373 (373)
T ss_pred CCCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEE--eCCCCh-----hhccCCCCCCC
Confidence 12235789999999999998887652 3678899998865 478764 699864 36999999985
No 40
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-45 Score=382.82 Aligned_cols=356 Identities=14% Similarity=0.128 Sum_probs=265.7
Q ss_pred HHHHHHhhhCCCCC------CChHHHHHHHHHHHHhCCCceEecC---CCceEEEEEc-CCC-CcEEEEEeccCcccCcC
Q 011407 101 KSVRRTIHQNPELA------FQEFETSRLLRAELDRMEIGYKYPL---AKTGIRAWVG-TGG-PPFVALRADMDALPIQE 169 (486)
Q Consensus 101 ~~ll~~lv~iPs~s------~~E~~~a~~l~~~L~~~G~~v~~~~---~~~nvia~~g-~~~-~~~ill~gH~DtVP~~~ 169 (486)
++++++|++|||++ ++|.++++||.++|+++||+++..+ +++|++++++ .++ .|+|+|+||+||||+++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 68899999999999 6799999999999999999987643 5689999984 333 48999999999999854
Q ss_pred --CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcC--CCccc
Q 011407 170 --AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADG--ALEDV 239 (486)
Q Consensus 170 --~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g--~~~~~ 239 (486)
|+..||.+ ++||++||||+. |+++++|+|+++|++.+..++++|.|+|++|||+++ |++.+++.. .+..+
T Consensus 82 ~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~~ 161 (426)
T PRK07906 82 ADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEGV 161 (426)
T ss_pred ccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccch
Confidence 34457766 468999999984 899999999999999988899999999999999975 899888753 23233
Q ss_pred cEEEEEecCCC---CCc--eeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc------
Q 011407 240 EAIFAVHVSHE---HPT--GVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE------ 308 (486)
Q Consensus 240 d~~i~~~~~~~---~p~--g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~------ 308 (486)
+++ +.+++.. .+. ....+..+.+ |..+++|+++|+++|++.|+. +||+..++++|.+|+++..+.
T Consensus 162 ~~i-i~e~~~~~~~~~~~~~~~~i~~~~k--G~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~ 237 (426)
T PRK07906 162 TEA-ISEVGGFSLTVPGRDRLYLIETAEK--GLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTV 237 (426)
T ss_pred heE-EECCCceeeccCCCccEEEEEeccc--eEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHH
Confidence 333 3443221 111 1122233333 889999999999999999875 999999999999997542100
Q ss_pred --------------cCCC-------------------CCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHH
Q 011407 309 --------------ANPL-------------------DSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQR 355 (486)
Q Consensus 309 --------------~~~~-------------------~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~ 355 (486)
..+. ..++++++.|+||.+.|+||++|++.+|+|++|+++ +++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~ 316 (426)
T PRK07906 238 RAFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLAT 316 (426)
T ss_pred HHHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHH
Confidence 0000 035899999999999999999999999999999986 666666
Q ss_pred HHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEE
Q 011407 356 IEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYY 434 (486)
Q Consensus 356 i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~ 434 (486)
|++++. ..+++++... ........++++++.++++++++++.... .+....|+||++++... +|++ .
T Consensus 317 i~~~~~-------~~v~~~~~~~--~~~~~~~~~~~~v~~l~~a~~~~~~~~~~-~~~~~~ggtDa~~~~~~g~p~~--~ 384 (426)
T PRK07906 317 VDELLG-------PDVEREWVHR--DPALETPFDGPLVDAMNAALLAEDPGARV-VPYMLSGGTDAKAFSRLGIRCY--G 384 (426)
T ss_pred HHHHhC-------CCeEEEEecC--CCCCCCCCCcHHHHHHHHHHHHHCCCCeE-eeeeecccCcHHHHHhcCCceE--E
Confidence 666542 2355554421 12223456899999999999987532211 24556788999998764 5654 3
Q ss_pred EccccCCCC--CCCCCCCCCCcCCCCchHHHHHHHHHHHHH
Q 011407 435 IGIKNETLG--SIHTGHSPYFMIDEDVLPVGAAVHATIAER 473 (486)
Q Consensus 435 ~G~~~~~~~--~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~ 473 (486)
+||+....+ ....+|++||+++++++.+++++|+.++.+
T Consensus 385 ~gp~~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 385 FAPLRLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred EeccccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 577531000 013699999999999999999999999865
No 41
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.1e-44 Score=370.69 Aligned_cols=339 Identities=16% Similarity=0.086 Sum_probs=257.0
Q ss_pred chHHHHHHHHHHhhhCCCCC----CChHHHHHHHHHHHHhCCCceEecC---CCceEEEEEcCCCCcEEEEEeccCcccC
Q 011407 95 ETVDWLKSVRRTIHQNPELA----FQEFETSRLLRAELDRMEIGYKYPL---AKTGIRAWVGTGGPPFVALRADMDALPI 167 (486)
Q Consensus 95 ~~~~~l~~ll~~lv~iPs~s----~~E~~~a~~l~~~L~~~G~~v~~~~---~~~nvia~~g~~~~~~ill~gH~DtVP~ 167 (486)
+..+++++++++|++|||.+ ++|.++++||.++|+ |++++... ++.|+++..| +|+|+|+||+||||+
T Consensus 3 ~~~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~ 77 (364)
T PRK08737 3 DLLESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPD 77 (364)
T ss_pred ccHHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCC
Confidence 35668999999999999985 357899999999996 99877542 4679998643 378999999999998
Q ss_pred cC-CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcCCCcccc
Q 011407 168 QE-AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADGALEDVE 240 (486)
Q Consensus 168 ~~-~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g~~~~~d 240 (486)
++ |+..||.+ +++|++||||++ |++++++.|++. +.++|.|+|++|||.|+ |++.+++.+. ++|
T Consensus 78 ~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~ 148 (364)
T PRK08737 78 SPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYE 148 (364)
T ss_pred CCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCC
Confidence 54 34457766 568999999995 888888888753 35799999999999886 8888988864 579
Q ss_pred EEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCC-CCCCcHHHHHHHHHHHHHhhh-hcc---cCCCCCe
Q 011407 241 AIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANP-HRSVDPVLAASAAVISLQGLV-SRE---ANPLDSQ 315 (486)
Q Consensus 241 ~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p-~~G~nAi~~a~~~i~~L~~l~-~~~---~~~~~~~ 315 (486)
++++.+|+.. .+. .|.+ |..+++|+++|+++|+|.| +.|+|||..+++++.++.+.. .+. .......
T Consensus 149 ~~iv~Ept~~----~~~--~~~k--G~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 220 (364)
T PRK08737 149 AVLVAEPTMS----EAV--LAHR--GISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGL 220 (364)
T ss_pred EEEEcCCCCc----eeE--Eecc--eeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCC
Confidence 9998776431 121 2322 8899999999999999997 689999999999998876543 111 1122345
Q ss_pred EEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCC-CHHHHH
Q 011407 316 VVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVN-DEDMYE 394 (486)
Q Consensus 316 ~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~-d~~~v~ 394 (486)
+++++.|+||.+.|+||++|++.+|+|+.|+++.+++.++|+++++.. ...+++.+.. +.+++... .++++.
T Consensus 221 t~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~ 293 (364)
T PRK08737 221 RFNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEPA----AATFEETFRG---PSLPSGDIARAEERR 293 (364)
T ss_pred ceEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHHc----CCceEEEecc---CCCCCcccCcchHHH
Confidence 899999999999999999999999999999999999999998777652 2233333321 23333322 235665
Q ss_pred HHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHH
Q 011407 395 HVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAE 472 (486)
Q Consensus 395 ~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~ 472 (486)
.+.+.+.+..|.+. ....+++||++++.. ++|++. +|||+. .++|++||++++++|.+++++|..++.
T Consensus 294 ~~~~~~~~~~~~~~---~~~~~~~tDa~~~~~~Gip~v~--~GpG~~-----~~aHt~dE~i~i~~l~~~~~~~~~~~~ 362 (364)
T PRK08737 294 LAARDVADALDLPI---GNAVDFWTEASLFSAAGYTALV--YGPGDI-----AQAHTADEFVTLDQLQRYAESVHRIIN 362 (364)
T ss_pred HHHHHHHhhhcCCC---CceeccccCHHHHHHcCCCEEE--ECCCCh-----hhccCCCcceeHHHHHHHHHHHHHHhc
Confidence 55444444456543 234567899999876 488864 599853 469999999999999999999998874
No 42
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=376.12 Aligned_cols=367 Identities=20% Similarity=0.267 Sum_probs=283.9
Q ss_pred cchHHHHHHHHHHhhhCCCCC-CChHHHHHHHHHHHHhCCCceEecC-C----CceEEEEEcCCC-CcEEEEEeccCccc
Q 011407 94 PETVDWLKSVRRTIHQNPELA-FQEFETSRLLRAELDRMEIGYKYPL-A----KTGIRAWVGTGG-PPFVALRADMDALP 166 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s-~~E~~~a~~l~~~L~~~G~~v~~~~-~----~~nvia~~g~~~-~~~ill~gH~DtVP 166 (486)
...++++++++++|+++||++ ..+.++++|++++|+++|+.++... + .+|+++++++++ +|+|+|+||+||||
T Consensus 9 ~~~~~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP 88 (409)
T COG0624 9 LDLLDDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVP 88 (409)
T ss_pred HHhhHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccC
Confidence 456788889999999999999 8899999999999999999877542 2 469999996653 39999999999999
Q ss_pred CcCCCCC---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCC---
Q 011407 167 IQEAVEW---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGA--- 235 (486)
Q Consensus 167 ~~~~~~~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~--- 235 (486)
+++...| ||.+ .++|++||||+. |++++++.|++.+.+.+..++++|.++|++|||+++ |...++..+.
T Consensus 89 ~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~ 168 (409)
T COG0624 89 AGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEAL 168 (409)
T ss_pred CCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhh
Confidence 9875555 6766 467999999995 999999999999999888899999999999999998 8887777653
Q ss_pred CccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCC--CCCCCc----HHHHHHHHHHHHHhhhhccc
Q 011407 236 LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN--PHRSVD----PVLAASAAVISLQGLVSREA 309 (486)
Q Consensus 236 ~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~--p~~G~n----Ai~~a~~~i~~L~~l~~~~~ 309 (486)
...+|+++..+++...+.+...+. +. .|..+++|+++|+++|+|. |+.|.| |+..+.+++..+.++.....
T Consensus 169 ~~~~d~~i~~E~~~~~~~~~~~~~-~~--kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~ 245 (409)
T COG0624 169 GIRPDYEIVGEPTLESEGGDIIVV-GH--KGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGF 245 (409)
T ss_pred ccCCCEEEeCCCCCcccCCCeEEE-cc--eeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccc
Confidence 236899998887211122222222 32 2899999999999999998 999999 55555555555554432222
Q ss_pred CCCCCeEEEEEEEecCc--------cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCC
Q 011407 310 NPLDSQVVSVTYFNGGD--------HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNT 381 (486)
Q Consensus 310 ~~~~~~~~~v~~i~gG~--------~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~ 381 (486)
.. ..+++++.+.++. ..|+||++|++.+|+|+.|.++.+++.+++++.++..+...+.+++++... ..
T Consensus 246 ~~--~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~--~~ 321 (409)
T COG0624 246 DG--PLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEPGL--GE 321 (409)
T ss_pred cC--CccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEecccc--CC
Confidence 20 2455666555444 469999999999999999999999999999999998665334455544211 12
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCch
Q 011407 382 VYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVL 460 (486)
Q Consensus 382 ~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l 460 (486)
...+...++++++.+.+++++.+|.+. ......+++|+.++... +| ...+||+.. ..+|++|||++++++
T Consensus 322 ~~~~~~~~~~~v~~l~~~~~~~~g~~~--~~~~~G~~~da~~~~~~~~~--~~~fgp~~~-----~~~H~~~E~v~i~~l 392 (409)
T COG0624 322 PPLPVPGDSPLVAALAEAAEELLGLPP--EVSTGGGTHDARFFARLGIP--AVIFGPGDI-----GLAHQPNEYVELEDL 392 (409)
T ss_pred ccccCCCchHHHHHHHHHHHHhhCCCc--eecCCCCcchHHHHHhcCCe--eEEECCCCc-----ccccCCCceeeHHHH
Confidence 333455689999999999999888763 23444467898888775 36 445788874 369999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 011407 461 PVGAAVHATIAERFLN 476 (486)
Q Consensus 461 ~~~~~i~~~~i~~~l~ 476 (486)
.+++++|+.++.+++.
T Consensus 393 ~~~~~~~~~~l~~l~~ 408 (409)
T COG0624 393 VKGAKVLARLLYELAE 408 (409)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999875
No 43
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3e-44 Score=374.23 Aligned_cols=346 Identities=18% Similarity=0.173 Sum_probs=273.9
Q ss_pred HHHHHHHHHHhhhCCC---------CCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC-CCCcEEEEEeccCccc
Q 011407 97 VDWLKSVRRTIHQNPE---------LAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-GGPPFVALRADMDALP 166 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs---------~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~-~~~~~ill~gH~DtVP 166 (486)
.+++++++.+|++|++ ++++|.++++||.++|+++|++++.. .+.|+++++++ +++|+|+|+||+||||
T Consensus 9 ~~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp 87 (412)
T PRK12892 9 GQRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQN 87 (412)
T ss_pred HHHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCC
Confidence 4678889999999866 56778999999999999999999874 46799999954 4568999999999999
Q ss_pred CcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc----C--cHHHHHHcCC-----
Q 011407 167 IQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG----N--GAKRMMADGA----- 235 (486)
Q Consensus 167 ~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g----~--G~~~l~~~g~----- 235 (486)
++ |+.||++ +++++|.|++.|++.+..++++|.|++++|||.+ + |++.++.+..
T Consensus 88 ~~------------g~~dg~~---Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~ 152 (412)
T PRK12892 88 LG------------GRYDGAL---GVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADAL 152 (412)
T ss_pred CC------------CcccchH---HHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHH
Confidence 63 4556664 6889999999999999899999999999999984 3 8888874210
Q ss_pred -----C-------------ccccEEEEEecCC--------------CCCcee-EEeccCcccceeeEEEEEEEeecCCCC
Q 011407 236 -----L-------------EDVEAIFAVHVSH--------------EHPTGV-IGSRPGPLLAGCGFFHAVISGKKGGAA 282 (486)
Q Consensus 236 -----~-------------~~~d~~i~~~~~~--------------~~p~g~-i~~~~G~~~ag~~~~~i~v~G~~~Ha~ 282 (486)
. ...|++++.+|.. .++.+. ..+..+. .|..+++|+++|+++|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~~~~i~~~~--kG~~~~~i~v~G~~aHa~ 230 (412)
T PRK12892 153 AARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGLPVGVVTGI--VGIWQYRITVTGEAGHAG 230 (412)
T ss_pred hCccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCCcEEEEEEe--ccceEEEEEEEEECCCCC
Confidence 0 0124444433221 011111 1122222 288899999999999998
Q ss_pred C-CC-CCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHH
Q 011407 283 N-PH-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEV 359 (486)
Q Consensus 283 ~-p~-~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~ 359 (486)
. |+ .|+||+..+++++.+|+++..+... ..+++++.|+|| .+.|+||++|++++|+|++|+++.+++.++|+++
T Consensus 231 ~~p~~~g~nAi~~a~~~i~~l~~~~~~~~~---~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~ 307 (412)
T PRK12892 231 TTPMALRRDAGLAAAEMIAAIDEHFPRVCG---PAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEAL 307 (412)
T ss_pred CCCcccccCHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 6 75 6899999999999999987543322 368999999987 7999999999999999999999999999999999
Q ss_pred HHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEcccc
Q 011407 360 IVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKN 439 (486)
Q Consensus 360 ~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~ 439 (486)
+++.+..++++++++.. ..+++...|+++++.+++++++ +|.++. ....+|++|+++|++.+|+++. +||+.
T Consensus 308 ~~~~~~~~~~~~e~~~~----~~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~-~gp~~ 379 (412)
T PRK12892 308 CREIARRRGCRVSVDRI----AEYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML-FVPSK 379 (412)
T ss_pred HHHHHHHhCCeEEEEEE----ecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE-EeccC
Confidence 99987777888777654 2456666789999999999999 787653 4567899999999877886543 56664
Q ss_pred CCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 440 ETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 440 ~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
. ..+|++||+++++++.+++++|+.++.+++.
T Consensus 380 ~-----~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 380 G-----GISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred C-----CCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 3 3599999999999999999999999988764
No 44
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=2.3e-44 Score=374.41 Aligned_cols=353 Identities=17% Similarity=0.168 Sum_probs=277.2
Q ss_pred HHHHHHHHHhhhCCCCCCC----------hHHHHHHHHHHHHhCCCc-eEecCCCceEEEEEcCC---CCcEEEEEeccC
Q 011407 98 DWLKSVRRTIHQNPELAFQ----------EFETSRLLRAELDRMEIG-YKYPLAKTGIRAWVGTG---GPPFVALRADMD 163 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~----------E~~~a~~l~~~L~~~G~~-v~~~~~~~nvia~~g~~---~~~~ill~gH~D 163 (486)
+++++.|++|++|||+|.+ |.++++||+++|+++|++ ++. +...||++.++++ ++|+|+|+||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~-~~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTL-DENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEE-CCCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 4688999999999999977 889999999999999997 554 3457899998432 359999999999
Q ss_pred cccCcCC---------------------CCCcccc--------cCCCeeeecCc-----h--HHHHHHHHHHHHHHhcCC
Q 011407 164 ALPIQEA---------------------VEWEYKS--------KVAGKMHACGH-----D--AHVAMLIGAAKILKSREH 207 (486)
Q Consensus 164 tVP~~~~---------------------~~~p~~~--------~~dG~l~GrG~-----~--g~~a~~l~aa~~L~~~g~ 207 (486)
|||+.+. +.|+|.| ..++.+||||+ | |+++++++|+++|++.+.
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 9987441 2344443 12357899995 3 899999999999998876
Q ss_pred CCCceEEEEeecCCCCcCcHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCC-CCC
Q 011407 208 LLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN-PHR 286 (486)
Q Consensus 208 ~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~-p~~ 286 (486)
.++++|.|+|++|||.|.|++.++.++. +.|++++.++. +.|.+.+. . .|..+++|+++|+++|++. |+.
T Consensus 161 ~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~~---~~g~~~~~--~--~g~~~~~i~v~Gk~~Ha~~~p~~ 231 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDGG---PLGELEYE--N--FNAASAKITIHGVNVHPGTAKGK 231 (408)
T ss_pred CCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecCC---CcceEEec--c--CceeEEEEEEeeecCCCCCCccc
Confidence 7889999999999998778888865533 35666666542 44554432 1 2677899999999999875 899
Q ss_pred CCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhh
Q 011407 287 SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARV 366 (486)
Q Consensus 287 G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~ 366 (486)
|+||+..+++++..|+++..+........+++++.++|| |++|++++|+|+.|.++.+++.++|++++++.+..
T Consensus 232 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~ 305 (408)
T PRK05469 232 MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAK 305 (408)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876433222222245678888776 89999999999999999999999999999998877
Q ss_pred c-CceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCC
Q 011407 367 F-RCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGS 444 (486)
Q Consensus 367 ~-g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~ 444 (486)
+ ++++++++.......+++..+++++++.+++++++ .|.++. ...+.|++|+++++. .+|++. +||++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~-~g~~~~--~~~~~ggtD~~~~~~~giP~v~--~gpG~~---- 376 (408)
T PRK05469 306 YGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMED-LGIEPI--IKPIRGGTDGSQLSFMGLPCPN--IFTGGH---- 376 (408)
T ss_pred cCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHH-cCCCcE--EecCCCcccHHHHhhCCCceEE--ECcCcc----
Confidence 7 57777766421111123466789999999999998 587653 346789999999985 588865 577653
Q ss_pred CCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 445 IHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 445 ~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
.+|++||+++++++..++++|..++..++.+
T Consensus 377 --~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 377 --NFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred --cCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 4999999999999999999999999988764
No 45
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=1.5e-44 Score=381.72 Aligned_cols=361 Identities=16% Similarity=0.107 Sum_probs=269.3
Q ss_pred HHHHhcCcchHHHHHHHHHHhhhCCCCCCC------------hHHHHHHHHHHHHhCCCceEecCCCceEEEEEc-CCCC
Q 011407 87 VMELARRPETVDWLKSVRRTIHQNPELAFQ------------EFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG-TGGP 153 (486)
Q Consensus 87 i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~------------E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g-~~~~ 153 (486)
+.+++ +++++++++++++|++|||++++ +.++++||+++|+++||+++..+ |+++++. ++++
T Consensus 5 ~~~~~--~~~~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---n~~~~~~~~~~~ 79 (466)
T PRK07318 5 WKKEV--EKRKDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---NYAGHIEYGEGE 79 (466)
T ss_pred HHHHH--HHhHHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec---CccceEEECCCC
Confidence 67788 88999999999999999999965 56899999999999999987643 6666542 2235
Q ss_pred cEEEEEeccCcccCcC-CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cH
Q 011407 154 PFVALRADMDALPIQE-AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GA 227 (486)
Q Consensus 154 ~~ill~gH~DtVP~~~-~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~ 227 (486)
|+|+|+||+||||+++ |+..||.+ ++||++||||+. |+++++++|++.|++.+.+++++|.|+|++|||+|+ |+
T Consensus 80 ~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G~ 159 (466)
T PRK07318 80 EVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKCM 159 (466)
T ss_pred CEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchhH
Confidence 8999999999999864 34557776 468999999984 899999999999999888889999999999999987 99
Q ss_pred HHHHHcCCCcc----ccE---EEEEecC-----------------------CCCCceeE------Ee-------------
Q 011407 228 KRMMADGALED----VEA---IFAVHVS-----------------------HEHPTGVI------GS------------- 258 (486)
Q Consensus 228 ~~l~~~g~~~~----~d~---~i~~~~~-----------------------~~~p~g~i------~~------------- 258 (486)
+++++...... .|+ ++..+++ ++.+.+.+ .+
T Consensus 160 ~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~ 239 (466)
T PRK07318 160 DYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAFE 239 (466)
T ss_pred HHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHHHH
Confidence 99988642110 111 2222221 00111110 00
Q ss_pred -------ccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhh------h----h--------------c
Q 011407 259 -------RPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGL------V----S--------------R 307 (486)
Q Consensus 259 -------~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l------~----~--------------~ 307 (486)
+.|....+..|++|+++|+++|++.|+.|+|||..|++++.+|+.. . . .
T Consensus 240 ~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (466)
T PRK07318 240 AFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAY 319 (466)
T ss_pred HHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcc
Confidence 0111111234799999999999999999999999999999998741 0 0 0
Q ss_pred ccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCC--
Q 011407 308 EANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP-- 385 (486)
Q Consensus 308 ~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~-- 385 (486)
.....+..++|++.|+||... +|++.+|+|++|+++.+++.++|++.+++ .+ ++++... .+++
T Consensus 320 ~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~--~~~~~~~----~~~p~~ 384 (466)
T PRK07318 320 EDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TG--VELSEHE----HQKPHY 384 (466)
T ss_pred cCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cC--eEEEEcc----CCCcee
Confidence 011123468899999988532 79999999999999999999999999765 23 4554431 2323
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHH
Q 011407 386 TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAA 465 (486)
Q Consensus 386 ~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~ 465 (486)
...++++++.+++++++++|.++. +..++|++|++++...+| +..++|++. .++|++||+++++++.++++
T Consensus 385 ~~~d~~lv~~l~~a~~~~~g~~~~--~~~~~ggtDa~~~~~~i~--~Gp~~pg~~-----~~aH~~dE~v~i~~l~~~~~ 455 (466)
T PRK07318 385 VPKDDPLVKTLLKVYEKQTGLKGE--EQVIGGGTYARLLKRGVA--FGAMFPGSE-----DTMHQANEYIEIDDLIKAAA 455 (466)
T ss_pred eCCCCHHHHHHHHHHHHHhCCCCC--eeEEcchHhHhhCCCeEE--eCCCCCCCC-----CCCcCCCcceeHHHHHHHHH
Confidence 456899999999999998887652 455688999998865433 112234432 45999999999999999999
Q ss_pred HHHHHHHHHHh
Q 011407 466 VHATIAERFLN 476 (486)
Q Consensus 466 i~~~~i~~~l~ 476 (486)
+|+.++.++++
T Consensus 456 v~~~~l~~~~~ 466 (466)
T PRK07318 456 IYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 46
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-44 Score=347.09 Aligned_cols=377 Identities=16% Similarity=0.140 Sum_probs=296.7
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCCh------HHHHHHHHHHHHhCCCceEecC-------------CCceE
Q 011407 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQE------FETSRLLRAELDRMEIGYKYPL-------------AKTGI 144 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E------~~~a~~l~~~L~~~G~~v~~~~-------------~~~nv 144 (486)
+.++++++ |..++++++.||+.++|+|+|.+. .++++|+++.|+++|-+++..+ ..+-+
T Consensus 4 l~~~fq~i--d~~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvv 81 (473)
T KOG2276|consen 4 LTKVFQSI--DLNKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVV 81 (473)
T ss_pred HHHHHHHh--hccHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhh
Confidence 67899999 999999999999999999999754 5899999999999997665321 23557
Q ss_pred EEEEcCCC-CcEEEEEeccCcccCcCCCCCcccc----cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEE
Q 011407 145 RAWVGTGG-PPFVALRADMDALPIQEAVEWEYKS----KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILI 216 (486)
Q Consensus 145 ia~~g~~~-~~~ill~gH~DtVP~~~~~~~p~~~----~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~ 216 (486)
.+++|+++ ++++++|||+||+|+..+++|.++| +++|++||||+. |++++++.|++++++.|.++|.||.|+
T Consensus 82 l~~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~ 161 (473)
T KOG2276|consen 82 LGVLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFV 161 (473)
T ss_pred hhcccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEE
Confidence 88888874 5899999999999998888887776 578999999994 999999999999999999999999999
Q ss_pred eecCCCCcC-cHHHHHHc---CCCccccEEEEEec---CCCCCceeEEeccCcccceeeEEEEEEEe--ecCCCCC-CCC
Q 011407 217 FQPAEEAGN-GAKRMMAD---GALEDVEAIFAVHV---SHEHPTGVIGSRPGPLLAGCGFFHAVISG--KKGGAAN-PHR 286 (486)
Q Consensus 217 ~~~dEE~g~-G~~~l~~~---g~~~~~d~~i~~~~---~~~~p~g~i~~~~G~~~ag~~~~~i~v~G--~~~Ha~~-p~~ 286 (486)
|.+.||+|+ |...+++. .+++++|++++.++ +...|+-+.+.| |.+++.|+|+| +..|||. ...
T Consensus 162 ~EgmEEsgS~~L~~l~~~~kD~~~~~vD~vciSdnyWlg~kkPcltyGlR------G~~yf~i~v~g~~~DlHSGvfGG~ 235 (473)
T KOG2276|consen 162 FEGMEESGSEGLDELIEKEKDKFFKDVDFVCISDNYWLGTKKPCLTYGLR------GVIYFQIEVEGPSKDLHSGVFGGV 235 (473)
T ss_pred EEechhccCccHHHHHHHHhhhhhccCCEEEeeCceeccCCCcccccccc------cceeEEEEEeecccccccccccch
Confidence 999999998 88887763 46778999998875 334555444433 88999999999 6789985 222
Q ss_pred CCcHHHHHHHHHHHHHhh----------------------------------------------------hhcccCCCCC
Q 011407 287 SVDPVLAASAAVISLQGL----------------------------------------------------VSREANPLDS 314 (486)
Q Consensus 287 G~nAi~~a~~~i~~L~~l----------------------------------------------------~~~~~~~~~~ 314 (486)
--.|+..+..++..|.+. +.|+..| ..
T Consensus 236 ~hE~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryP-SL 314 (473)
T KOG2276|consen 236 VHEAMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYP-SL 314 (473)
T ss_pred hHHHHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccC-cc
Confidence 226777777777766221 1233333 12
Q ss_pred eEEEE-EEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHH
Q 011407 315 QVVSV-TYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMY 393 (486)
Q Consensus 315 ~~~~v-~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v 393 (486)
+.+.| |.+++.+++.|||.++..+|.+|++|+++.+.+.+.+.+++++...+.+...++++...+...++...++++.+
T Consensus 315 sihgIeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~~~~~Wv~d~~~~~y 394 (473)
T KOG2276|consen 315 SIHGIEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMGHAGAPWVSDPDDPHY 394 (473)
T ss_pred ceecccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeecCCCCceecCCCchhH
Confidence 33444 67788889999999999999999999999999999999999998887766555544433345566667899999
Q ss_pred HHHHHHHHHhcCCCccc--ccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHH
Q 011407 394 EHVKKVAIDLLGPMNYR--VVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIA 471 (486)
Q Consensus 394 ~~l~~a~~~~~G~~~~~--~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i 471 (486)
.++++|++.++|.+|.. +....+-.-++.... +.+++...+|..++ ++|+.||++++.++.+|++++++++
T Consensus 395 ~a~krA~~~v~gvePd~~ReGgSIPvt~tfQ~~~-~~~V~llP~G~~dD------~aHsqNEkl~i~N~~~G~k~l~ay~ 467 (473)
T KOG2276|consen 395 LALKRAIETVYGVEPDFTREGGSIPVTLTFQDIT-GKSVLLLPYGASDD------GAHSQNEKLNITNYVEGTKVLAAYI 467 (473)
T ss_pred HHHHHHHHHhhCCCCCccccCCccceehHHHHHh-CCCeEEeccccccc------chhhhcccccHHHHhhhHHHHHHHH
Confidence 99999999999998753 222333333333322 25666665666554 6999999999999999999999999
Q ss_pred HHHHh
Q 011407 472 ERFLN 476 (486)
Q Consensus 472 ~~~l~ 476 (486)
.++-+
T Consensus 468 ~el~~ 472 (473)
T KOG2276|consen 468 SELAQ 472 (473)
T ss_pred HHHhc
Confidence 88753
No 47
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-43 Score=371.55 Aligned_cols=357 Identities=14% Similarity=0.102 Sum_probs=256.8
Q ss_pred cchHHHHHHHHHHhhhCCCCCCCh----------HHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccC
Q 011407 94 PETVDWLKSVRRTIHQNPELAFQE----------FETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMD 163 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~~E----------~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~D 163 (486)
++.++++++++++|++|||+++++ .++++|+.++|+++||+++......+++++++.+ +|+|+|+||+|
T Consensus 7 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~~-~~~lll~gH~D 85 (444)
T PRK07205 7 EKVQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQG-EELLAILCHLD 85 (444)
T ss_pred HHhHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecCC-CcEEEEEEeec
Confidence 456889999999999999999765 5688899999999999987654445677777644 58999999999
Q ss_pred cccCcCCCCC---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCC
Q 011407 164 ALPIQEAVEW---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGA 235 (486)
Q Consensus 164 tVP~~~~~~~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~ 235 (486)
|||+++.+.| ||.+ ++||++||||+. |+++++|.|+++|++.+.+++++|.|+|++|||+|+ |+..+++...
T Consensus 86 vVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~ 165 (444)
T PRK07205 86 VVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEE 165 (444)
T ss_pred cCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCC
Confidence 9998764445 7776 578999999994 999999999999999998899999999999999987 8888877421
Q ss_pred Cc----cccE---EEEEecC------CCCCceeEEeccC--------------cc---------cce----eeEEEEEEE
Q 011407 236 LE----DVEA---IFAVHVS------HEHPTGVIGSRPG--------------PL---------LAG----CGFFHAVIS 275 (486)
Q Consensus 236 ~~----~~d~---~i~~~~~------~~~p~g~i~~~~G--------------~~---------~ag----~~~~~i~v~ 275 (486)
.. .+|. ++..+.+ .++|+.......| .. ..| ..+.+|+++
T Consensus 166 ~~~~~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~ 245 (444)
T PRK07205 166 QATMGFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVL 245 (444)
T ss_pred CCCeeECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEE
Confidence 10 1121 1111100 0111111100001 00 001 123489999
Q ss_pred eecCCCCCCCCCCcHHHHHHHHHHHHHhhh-----hcc---------------cCCCCCeEEEEEEEecCccCccccCeE
Q 011407 276 GKKGGAANPHRSVDPVLAASAAVISLQGLV-----SRE---------------ANPLDSQVVSVTYFNGGDHLDMIPDAV 335 (486)
Q Consensus 276 G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~-----~~~---------------~~~~~~~~~~v~~i~gG~~~nvIP~~a 335 (486)
|+++|++.|+.|+|||..+++++.++++.. .+. ....+..++|++. .|+||++|
T Consensus 246 G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~------~nvvP~~a 319 (444)
T PRK07205 246 GKSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG------LTITKEKS 319 (444)
T ss_pred eEEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE------EEEECCEE
Confidence 999999999999999999999998886531 000 0012345666654 48999999
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCC
Q 011407 336 VIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPM 415 (486)
Q Consensus 336 ~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~ 415 (486)
++.+|+|++|+++.+++.++|++++++ .+ ++++.... ........++++++.+.+++++++|.+.. ...+
T Consensus 320 ~~~ld~R~~p~~~~e~v~~~i~~~~~~----~~--v~~~~~~~--~~p~~~~~~~~lv~~l~~~~~~~~g~~~~--~~~~ 389 (444)
T PRK07205 320 EIRIDIRIPVLADKEKLVQQLSQKAQE----YG--LTYEEFDY--LAPLYVPLDSELVSTLMSVYQEKTGDDSP--AQSS 389 (444)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHH----cC--cEEEEecC--CCceeeCCCcHHHHHHHHHHHHHhCCCCc--eEEe
Confidence 999999999999999999999998765 22 33332210 11122456899999999999998887542 3334
Q ss_pred cccchHHHHHhhcCccEEEEc---cccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 416 MGAEDFSFYSEVVPAAFYYIG---IKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 416 ~g~tD~~~~~~~~p~~~~~~G---~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
.|++|...+ .|++ .+| |+.. ..+|++||+++++++.+++++|+.++.+++.+
T Consensus 390 gg~~~~~~~---~~~i--~~G~~~Pg~~-----~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~~ 444 (444)
T PRK07205 390 GGATFARTM---PNCV--AFGALFPGAP-----QTEHQANEHIVLEDLYRAMDIYAEAIYRLTTD 444 (444)
T ss_pred ccHHHHHhC---CCcE--EECCccCCCC-----CCCcCcccCccHHHHHHHHHHHHHHHHHHhcC
Confidence 455553322 2433 467 5432 46999999999999999999999999998764
No 48
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=2.1e-43 Score=358.09 Aligned_cols=328 Identities=14% Similarity=0.114 Sum_probs=255.5
Q ss_pred HHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCCcccc-cCC
Q 011407 102 SVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKS-KVA 180 (486)
Q Consensus 102 ~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p~~~-~~d 180 (486)
+++++|++|||+|++|.++++||+++|+++|+++.. +...|+++..+++ +|+|+|+||+||||. +|.+ .++
T Consensus 1 ~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~-~~~~~~~~~~~~~-~~~i~~~~H~D~vp~------~~~~~~~~ 72 (336)
T TIGR01902 1 ELLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLII-DDAGNFILGKGDG-HKKILLAGHVDTVPG------YIPVKIEG 72 (336)
T ss_pred ChHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEE-CCCCcEEEEeCCC-CceEEEEccccccCC------CcccEEeC
Confidence 368999999999999999999999999999999853 3456888876543 689999999999984 2444 468
Q ss_pred CeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeE
Q 011407 181 GKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVI 256 (486)
Q Consensus 181 G~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i 256 (486)
|++||||+. |++++++.|++.|++. +++|.|+|++|||.|+ |++.+++... .+++++.+|+. .+ .+
T Consensus 73 g~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~ept~-~~--~i 142 (336)
T TIGR01902 73 GLLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVGEPSG-AE--GI 142 (336)
T ss_pred CEEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEecCCC-Cc--ce
Confidence 999999994 8999999999999864 3689999999999987 9999988743 35788777642 11 22
Q ss_pred EeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHh-hhhcccCCCCCeEEEEEEEecCccCccccCeE
Q 011407 257 GSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQG-LVSREANPLDSQVVSVTYFNGGDHLDMIPDAV 335 (486)
Q Consensus 257 ~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~-l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a 335 (486)
.+ +. .|..+++++++|+++|++.|+ ||+..+.+++..|.+ +..+.. ....+++++.++||.+.|+||++|
T Consensus 143 ~~--~~--kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~i~gg~~~nvIP~~a 213 (336)
T TIGR01902 143 TL--GY--KGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQPEN--YDKPSIVPTIIRFGESYNDTPAKL 213 (336)
T ss_pred ee--ee--eeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhccccC--CCCCcceeEEEEccCCCcCCCceE
Confidence 21 22 288999999999999999875 488899999988873 322111 123467888999999999999999
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCC
Q 011407 336 VIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPM 415 (486)
Q Consensus 336 ~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~ 415 (486)
++++|+|+.|+++.+++.+++++. . .++++.... .++ .....++++++.++++++++ +.++. ....
T Consensus 214 ~~~idiR~~p~~~~~~~~~~i~~~-------~--~~~~~~~~~-~~p-~~~~~~~~lv~~~~~a~~~~-~~~~~--~~~~ 279 (336)
T TIGR01902 214 ELHFDLRYPPNNKPEEAIKEITDK-------F--PICLEIVDE-TPP-YKVSRNNPLVRAFVRAIRKQ-GMKPR--LKKK 279 (336)
T ss_pred EEEEEEeeCCCCCHHHHHHHHHhc-------c--CceEEEEec-cCc-eecCCCCHHHHHHHHHHHHc-CCCeE--Eeec
Confidence 999999999999999998888761 1 233433311 111 22356889999999999985 55442 3455
Q ss_pred cccchHHHHHhh--cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 416 MGAEDFSFYSEV--VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 416 ~g~tD~~~~~~~--~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
.|++|++++.+. +|++ .+||+.. ..+|++||+++++++.+++++|..++.+++++
T Consensus 280 ~g~tD~~~~~~~~g~p~v--~~Gpg~~-----~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~~ 336 (336)
T TIGR01902 280 TGTSDMNILAPIWTVPMV--AYGPGDS-----TLDHTPQEKISLAEYLIGIKTLMLAIEELWQK 336 (336)
T ss_pred cccCccceeccccCCCeE--EECCCCc-----ccCCCCcceeEHHHHHHHHHHHHHHHHHHhcC
Confidence 788999988764 4554 4798864 35899999999999999999999999988753
No 49
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-42 Score=362.13 Aligned_cols=345 Identities=16% Similarity=0.220 Sum_probs=271.0
Q ss_pred HHHHHHHHHHhhhC-C---------CCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCC--CCcEEEEEeccCc
Q 011407 97 VDWLKSVRRTIHQN-P---------ELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTG--GPPFVALRADMDA 164 (486)
Q Consensus 97 ~~~l~~ll~~lv~i-P---------s~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~--~~~~ill~gH~Dt 164 (486)
.+.+++++++|++| + |+|++|.++++||.++|+++||+++.. .+.|++++++++ ++|+|+|+||+||
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~Dt 84 (413)
T PRK09290 6 AERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDT 84 (413)
T ss_pred HHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccC
Confidence 47778888888888 3 778899999999999999999999874 467999999543 3589999999999
Q ss_pred ccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc-----C-cHHHHHHc-----
Q 011407 165 LPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG-----N-GAKRMMAD----- 233 (486)
Q Consensus 165 VP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g-----~-G~~~l~~~----- 233 (486)
||++ |..+|+ +++++++.|+++|++.+..++++|.|+|++|||.| . |++.+.+.
T Consensus 85 Vp~~------------g~~d~k---~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~ 149 (413)
T PRK09290 85 VPNG------------GRFDGP---LGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPED 149 (413)
T ss_pred CCCC------------CCcCCH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHH
Confidence 9973 222332 47889999999999988888999999999999984 2 77666532
Q ss_pred -------------------CCCccccEEEEE--ecCCC--------------CCcee-EEeccCcccceeeEEEEEEEee
Q 011407 234 -------------------GALEDVEAIFAV--HVSHE--------------HPTGV-IGSRPGPLLAGCGFFHAVISGK 277 (486)
Q Consensus 234 -------------------g~~~~~d~~i~~--~~~~~--------------~p~g~-i~~~~G~~~ag~~~~~i~v~G~ 277 (486)
| + +.|++++. +|+.. +|.+. ..+..+.+ |..+++|+++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~-~-~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~~~i~~~~k--G~~~~~i~v~Gk 225 (413)
T PRK09290 150 ALALRDADGVSFAEALAAIG-Y-DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLPIGVVTGIV--GQRRYRVTFTGE 225 (413)
T ss_pred HHhccCCCCCCHHHHHHHcC-C-ChhhccccccCCCCccEEEEEEeccCHHHHHCCCcEEEEeeee--ccEEEEEEEEEE
Confidence 2 1 34665543 22210 12211 11222322 889999999999
Q ss_pred cCCCC-CC-CCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHHHH
Q 011407 278 KGGAA-NP-HRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQ 354 (486)
Q Consensus 278 ~~Ha~-~p-~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v~~ 354 (486)
++|++ .| +.|+|||..+++++.+|+++..+.. ...+++++.+++| .+.|+||++|++++|+|++|+++.+++.+
T Consensus 226 ~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~ 302 (413)
T PRK09290 226 ANHAGTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVA 302 (413)
T ss_pred CCCCCCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHH
Confidence 99998 48 5899999999999999988753321 2357899999965 79999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEE
Q 011407 355 RIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYY 434 (486)
Q Consensus 355 ~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~ 434 (486)
+|++++++.+...+++++++.. ..++++.+++++++.+++++++ +|.++. ....+|++|+++|+..+|++++
T Consensus 303 ~i~~~~~~~~~~~~~~~e~~~~----~~~~~~~~d~~lv~~l~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~iP~~~~- 374 (413)
T PRK09290 303 ELRAAAEAIAARRGVEVEIELI----SRRPPVPFDPGLVAALEEAAER-LGLSYR--RLPSGAGHDAQILAAVVPTAMI- 374 (413)
T ss_pred HHHHHHHHHHHHcCCeEEEEEE----ecCCCccCCHHHHHHHHHHHHH-cCCCcc--ccCCccchHHHHHhccCCEEEE-
Confidence 9999999987777777777654 2356667899999999999987 476542 4567889999999877998554
Q ss_pred EccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 435 IGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 435 ~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
+||+.. ..+|++||+++++++..++++|+.++.+++..
T Consensus 375 ~gp~~~-----~~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~~ 412 (413)
T PRK09290 375 FVPSVG-----GISHNPAEFTSPEDCAAGANVLLHALLELAEE 412 (413)
T ss_pred EeccCC-----CCCCCccccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 455542 35899999999999999999999999998864
No 50
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.5e-42 Score=359.72 Aligned_cols=345 Identities=17% Similarity=0.186 Sum_probs=271.2
Q ss_pred HHHHHHHHHHhhhCCCC----------CCChHHHHHHHHHHHHhCCCceEecCCCceEEEEE-cCC-CCcEEEEEeccCc
Q 011407 97 VDWLKSVRRTIHQNPEL----------AFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV-GTG-GPPFVALRADMDA 164 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~----------s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~-g~~-~~~~ill~gH~Dt 164 (486)
.+++++++++|++|||. |++|.++++||.++|+++||+++.. ...|+++++ |.+ ++|+|+|+||+||
T Consensus 9 ~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~Dt 87 (412)
T PRK12893 9 GERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDT 87 (412)
T ss_pred HHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccC
Confidence 57899999999999965 4458999999999999999999864 356999999 444 3689999999999
Q ss_pred ccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc-----C-cHHHHHHcCCC--
Q 011407 165 LPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG-----N-GAKRMMADGAL-- 236 (486)
Q Consensus 165 VP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g-----~-G~~~l~~~g~~-- 236 (486)
||++ |..||+ ++++++|.|++.|++.+..++++|.|+|++|||+| . |+..+......
T Consensus 88 Vp~~------------g~~dgk---~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~ 152 (412)
T PRK12893 88 QPTG------------GRFDGA---LGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDD 152 (412)
T ss_pred CCCC------------Ccccch---hhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHH
Confidence 9963 344565 46789999999999988889999999999999986 2 67666543110
Q ss_pred -----------------------------ccccEEEEEecCCC-----CC-ceeEEeccCcccceeeEEEEEEEeecCCC
Q 011407 237 -----------------------------EDVEAIFAVHVSHE-----HP-TGVIGSRPGPLLAGCGFFHAVISGKKGGA 281 (486)
Q Consensus 237 -----------------------------~~~d~~i~~~~~~~-----~p-~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha 281 (486)
.+.|..+..|...+ .+ ...+. .+. .|..+++|+++|+++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~--~~~--kG~~~~~i~v~G~~aHa 228 (412)
T PRK12893 153 ALARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGLPIGVV--TGI--QGIRWLEVTVEGQAAHA 228 (412)
T ss_pred HHhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCCcEEEE--eee--cccEEEEEEEEEECCCc
Confidence 01233343443111 00 11121 222 38899999999999999
Q ss_pred CC-CC-CCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHHHHHHHH
Q 011407 282 AN-PH-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEE 358 (486)
Q Consensus 282 ~~-p~-~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~ 358 (486)
+. |+ .|+|||..+++++.+|+++..+.. ...+++++.+++| .+.|+||++|++++|+|++|+++.+++.++|++
T Consensus 229 s~~p~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~ 305 (412)
T PRK12893 229 GTTPMAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRA 305 (412)
T ss_pred CCCcchhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 96 84 899999999999999998754321 2467899999975 799999999999999999999999999999999
Q ss_pred HHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccc
Q 011407 359 VIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIK 438 (486)
Q Consensus 359 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~ 438 (486)
++++.+..++++++++.. ..+++...++++++.+++++++ +|.++. +....|++|+++|++.+|+++. +||+
T Consensus 306 ~~~~~~~~~~~~v~~~~~----~~~~~~~~d~~l~~~l~~~~~~-~g~~~~--~~~~~g~tD~~~~~~~~p~~v~-~gp~ 377 (412)
T PRK12893 306 ACAKIAAARGVQVTVETV----WDFPPVPFDPALVALVEAAAEA-LGLSHM--RMVSGAGHDAMFLARVAPAAMI-FVPC 377 (412)
T ss_pred HHHHHHHHcCCeEEEEEE----ecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCCccHHHHHHHHhhCCEEEE-Eeec
Confidence 999987777777776554 2355667789999999999987 576652 4567889999999887886544 5666
Q ss_pred cCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 439 NETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 439 ~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
.. ..+|++||++++++|..++++|+.++.+++.+
T Consensus 378 ~~-----~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~~ 411 (412)
T PRK12893 378 RG-----GISHNEAEDTEPADLAAGANVLLHAVLELAGR 411 (412)
T ss_pred CC-----CCCCCccccCCHHHHHHHHHHHHHHHHHhhcc
Confidence 43 35899999999999999999999999998753
No 51
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=7e-42 Score=365.23 Aligned_cols=360 Identities=15% Similarity=0.130 Sum_probs=267.0
Q ss_pred cchHHHHHHHHHHhhhCCCCCC-----Ch----HHHHHHHHHHHHhCCCceEecCCCceEE--EEEcCCCCcEEEEEecc
Q 011407 94 PETVDWLKSVRRTIHQNPELAF-----QE----FETSRLLRAELDRMEIGYKYPLAKTGIR--AWVGTGGPPFVALRADM 162 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~-----~E----~~~a~~l~~~L~~~G~~v~~~~~~~nvi--a~~g~~~~~~ill~gH~ 162 (486)
+++++++++++++|++|||+++ +| ..+++||.++|+++|++++.. .|++ +++++...|+|+|+|||
T Consensus 42 ~~~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~---~~~v~~~~~~g~~~~~l~l~gH~ 118 (520)
T PRK06156 42 LKYGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV---DNRVLEIGLGGSGSDKVGILTHA 118 (520)
T ss_pred hhhHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec---CCeEEEEEecCCCCCeEEEEEec
Confidence 5678899999999999999984 23 357899999999999998643 3544 56653335899999999
Q ss_pred CcccCcC--CCC-----Ccccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHH
Q 011407 163 DALPIQE--AVE-----WEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRM 230 (486)
Q Consensus 163 DtVP~~~--~~~-----~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l 230 (486)
||||++. |+. +||.+ +++|++||||+. |++++++.|+++|++.+.+++++|.|+|++|||.|+ |++.+
T Consensus 119 DvVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~ 198 (520)
T PRK06156 119 DVVPANPELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYY 198 (520)
T ss_pred CccCCCCccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHH
Confidence 9999854 444 66666 468999999984 889999999999999888888999999999999987 99999
Q ss_pred HHcCCCccccEEEE---------EecCC------------------------CC-----Cce-eEEeccCcc--------
Q 011407 231 MADGALEDVEAIFA---------VHVSH------------------------EH-----PTG-VIGSRPGPL-------- 263 (486)
Q Consensus 231 ~~~g~~~~~d~~i~---------~~~~~------------------------~~-----p~g-~i~~~~G~~-------- 263 (486)
++++. ..|++++ .+++. +. |.. ...+.....
T Consensus 199 ~~~~~--~~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~ 276 (520)
T PRK06156 199 LERYT--PPDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQ 276 (520)
T ss_pred HHhcC--CCCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHH
Confidence 88754 2344432 22210 00 000 000000000
Q ss_pred ---------cceee---------EEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhc------------------
Q 011407 264 ---------LAGCG---------FFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR------------------ 307 (486)
Q Consensus 264 ---------~ag~~---------~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~------------------ 307 (486)
..|.. |++|+++|+++|+|.|+.|+|||..+++++.+|+++...
T Consensus 277 ~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~ 356 (520)
T PRK06156 277 AAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDY 356 (520)
T ss_pred HHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCC
Confidence 00222 799999999999999999999999999999999752100
Q ss_pred ---------ccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecC
Q 011407 308 ---------EANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDK 378 (486)
Q Consensus 308 ---------~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~ 378 (486)
.....+..+++++.|.+|. +.|++.+|+|++|+++.+++.++|++.+++.+...+.++++....
T Consensus 357 ~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~~~- 429 (520)
T PRK06156 357 LGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDYYW- 429 (520)
T ss_pred ccCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEeecC-
Confidence 0011233467788888764 689999999999999999999999999988665556666554321
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCC
Q 011407 379 GNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDED 458 (486)
Q Consensus 379 ~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~ 458 (486)
..+.....++++++.+.+++++++|.++ .+..+.|++|++++. ++ +.+||+.++ ....+|++||+++++
T Consensus 430 --~~p~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~~ggTDa~~~~---~~--v~fGP~~~g--~~~~aHt~dE~V~ie 498 (520)
T PRK06156 430 --GEPMVRDPKGPWLKTLLDVFGHFTGLDA--KPVAIAGSTNAKLFP---NA--VSFGPAMPG--VKYTGHTENEFKTVE 498 (520)
T ss_pred --CCceeeCCCCHHHHHHHHHHHHHhCCCC--ceeeecChhhhhhCC---cc--EEEcCCCCC--CCCCCcCcccCCCHH
Confidence 1122234588999999999999988865 346678899987763 32 346886321 113589999999999
Q ss_pred chHHHHHHHHHHHHHHHh
Q 011407 459 VLPVGAAVHATIAERFLN 476 (486)
Q Consensus 459 ~l~~~~~i~~~~i~~~l~ 476 (486)
++..++++|+.++.+++.
T Consensus 499 ~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 499 QFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999999986
No 52
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.1e-40 Score=347.20 Aligned_cols=345 Identities=17% Similarity=0.152 Sum_probs=265.8
Q ss_pred HHHHHHHHhhhC---C-------CCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC-CC-CcEEEEEeccCccc
Q 011407 99 WLKSVRRTIHQN---P-------ELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-GG-PPFVALRADMDALP 166 (486)
Q Consensus 99 ~l~~ll~~lv~i---P-------s~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~-~~-~~~ill~gH~DtVP 166 (486)
++++.+.+|-+| | +.+++|.++++||.++|+++|++++.+ ...|+++++.+ ++ +|+|+|+||+||||
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp 89 (414)
T PRK12891 11 RLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQP 89 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCC
Confidence 566666666665 2 334678999999999999999999875 45799999943 33 58999999999999
Q ss_pred CcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC------cHH------------
Q 011407 167 IQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN------GAK------------ 228 (486)
Q Consensus 167 ~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~------G~~------------ 228 (486)
.+.. .|+ .+++++++.|++.|++.+.+++++|.|++++|||.++ |+.
T Consensus 90 ~gg~--------~D~-------k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~ 154 (414)
T PRK12891 90 TGGR--------YDG-------IYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLL 154 (414)
T ss_pred CCcc--------ccc-------hhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHH
Confidence 6321 011 2678899999999999999999999999999999852 554
Q ss_pred ------------HHHHcCCCc-------cccEEEEEecCCC---CCce-eEEeccCcccceeeEEEEEEEeecCCCCC-C
Q 011407 229 ------------RMMADGALE-------DVEAIFAVHVSHE---HPTG-VIGSRPGPLLAGCGFFHAVISGKKGGAAN-P 284 (486)
Q Consensus 229 ------------~l~~~g~~~-------~~d~~i~~~~~~~---~p~g-~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~-p 284 (486)
.|.+.|+.. ..++.+.+|...+ ++.+ .+.+..+.. |..+++|+++|+++|++. |
T Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~~~~iv~~~k--G~~~~~v~v~Gk~aHa~~~P 232 (414)
T PRK12891 155 SRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGKTIGVVTAGQ--GQRWYEVTLTGVDAHAGTTP 232 (414)
T ss_pred hccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCCcEEEEeecc--CcEEEEEEEEeECCCCCCCC
Confidence 334444321 1223344443221 1112 122222332 889999999999999995 8
Q ss_pred C-CCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHH
Q 011407 285 H-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE 362 (486)
Q Consensus 285 ~-~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~ 362 (486)
+ .|+|||..+++++.+|+++..+.. ...++++|.|+|| .+.|+||++|++.+|+|++|.++.+++.++|++++++
T Consensus 233 ~~~g~nAI~~aa~~i~~l~~~~~~~~---~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~ 309 (414)
T PRK12891 233 MAFRRDALVGAARMIAFLDALGRRDA---PDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELAR 309 (414)
T ss_pred cccccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 6 589999999999999998754321 2468999999997 6899999999999999999999999999999999999
Q ss_pred HHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCC
Q 011407 363 QARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETL 442 (486)
Q Consensus 363 ~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~ 442 (486)
.+..++++++++.. ..++++.+++++++.+++++++ +|.+.. ...+.+++|+.++...+|+++. +||+..
T Consensus 310 ~~~~~~~~~~~~~~----~~~~~~~~d~~lv~~l~~a~~~-~G~~~~--~~~~~ggtDa~~~~~giPt~~~-~gp~~~-- 379 (414)
T PRK12891 310 IADETGLRADIEQI----FGYAPAPFAPGCIDAVRDAARA-LGLSHM--DIVSGAGHDACFAARGAPTGMI-FVPCVD-- 379 (414)
T ss_pred HHHHhCCEEEEEEE----ecCCCcCCCHHHHHHHHHHHHH-cCCCce--ecCCcchHHHHHHHhhCCEEEE-EEcCCC--
Confidence 87777877777654 2455667799999999999976 587653 3567889998888778998553 455543
Q ss_pred CCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 443 GSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 443 ~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
..+|++||++++++|..++++|+.++.++.+.
T Consensus 380 ---~~aH~~dE~v~i~~l~~~~~il~~~l~~~~~~ 411 (414)
T PRK12891 380 ---GLSHNEAEAITPEWFAAGADVLLRAVLQSAQE 411 (414)
T ss_pred ---CCCCCccccCCHHHHHHHHHHHHHHHHHHhhh
Confidence 35899999999999999999999999998765
No 53
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=2.2e-41 Score=351.99 Aligned_cols=351 Identities=16% Similarity=0.155 Sum_probs=267.3
Q ss_pred HHHHHHHHHhhhCCCCCC----------ChHHHHHHHHHHHHhCCCc-eEecCCCceEEEEE-cCCC--CcEEEEEeccC
Q 011407 98 DWLKSVRRTIHQNPELAF----------QEFETSRLLRAELDRMEIG-YKYPLAKTGIRAWV-GTGG--PPFVALRADMD 163 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~----------~E~~~a~~l~~~L~~~G~~-v~~~~~~~nvia~~-g~~~--~~~ill~gH~D 163 (486)
+++++.+-++++|+|.|+ .|.++|++|+++|+++|++ ++.+.+..||+|++ ++++ .|+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 567888888999999997 5558999999999999997 87754368999998 4343 39999999999
Q ss_pred cccCcCCC-------------------------CC---cccc--------cCCCeeeecCchHHHHHHHHHHHHHHhcCC
Q 011407 164 ALPIQEAV-------------------------EW---EYKS--------KVAGKMHACGHDAHVAMLIGAAKILKSREH 207 (486)
Q Consensus 164 tVP~~~~~-------------------------~~---p~~~--------~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~ 207 (486)
|||..... .| ||.. ..++.+||+...|++|++|.|++.|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99852221 22 3331 234589995555999999999999998644
Q ss_pred CCCceEEEEeecCCCCcCcHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCC-CC
Q 011407 208 LLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANP-HR 286 (486)
Q Consensus 208 ~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p-~~ 286 (486)
.++++|.|+|++|||.|+|++.+..++. ++|++++.+ ++|+|.+.++. .|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~---gep~g~i~~~~----~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVD---GGPLGELEYET----FSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeC---CCCCCeEEEcc----ccceEEEEEEEEEecCcccChHH
Confidence 4689999999999998778888766543 456665554 25667664432 26789999999999999974 68
Q ss_pred CCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhh
Q 011407 287 SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARV 366 (486)
Q Consensus 287 G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~ 366 (486)
|+||+..+.+++..+..... + ..++.+++.+++| ..|.||++|++.+|+|+.+.++.+++.++|++++++.+..
T Consensus 234 g~nAi~~a~~~~~~l~~~~~----~-~~t~~~~g~i~~g-~i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~ 307 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDDR----P-EYTEGREGFFHLL-SIDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNE 307 (410)
T ss_pred HHHHHHHHHHHHHhcCCcCC----C-ccccceeEEEEEE-eEEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988776654311 1 1111223455555 3677999999999999999999999999999999998877
Q ss_pred cCc-eeEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCC
Q 011407 367 FRC-SATVDFFDKGNTV-YPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLG 443 (486)
Q Consensus 367 ~g~-~~~v~~~~~~~~~-~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~ 443 (486)
+++ .+++++... ... .+...+++++++.+++++++ +|.++. ...+.|++|+++++. ++|++. +|||..
T Consensus 308 ~g~~~v~~~~~~~-~~~~~~~~~~~~~lv~~~~~a~~~-~G~~~~--~~~~~ggtDa~~~~~~Gip~~~--~G~G~~--- 378 (410)
T TIGR01882 308 YGQDRIKLDMNDQ-YYNMAEKIEKVMEIVDIAKQAMEN-LGIEPK--ISPIRGGTDGSQLSYMGLPTPN--IFAGGE--- 378 (410)
T ss_pred cCCceEEEEEEee-ecChhhccCCCHHHHHHHHHHHHH-hCCCCc--ccccceechHHHHHhCCCCCCe--EcCCcc---
Confidence 763 456655421 111 12455789999999999998 587653 356789999999876 488875 577652
Q ss_pred CCCCCCCCCCcCCCCchHHHHHHHHHHHHHHH
Q 011407 444 SIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 475 (486)
Q Consensus 444 ~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l 475 (486)
++|++||++++++|.+++++|..++..+.
T Consensus 379 ---~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 379 ---NMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred ---cCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 49999999999999999999999998775
No 54
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=3.5e-41 Score=356.96 Aligned_cols=351 Identities=15% Similarity=0.124 Sum_probs=256.8
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC--C--CCcEEEEEeccCcccCcC---
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT--G--GPPFVALRADMDALPIQE--- 169 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~--~--~~~~ill~gH~DtVP~~~--- 169 (486)
-+++++++++|++||++|++|.++++||.++|+++|++++++. ..|+++++.+ + +.|+|+|.||+||||++.
T Consensus 3 ~~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~ 81 (477)
T TIGR01893 3 PSRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQDE-VGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDS 81 (477)
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEeC-CCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCC
Confidence 3678899999999999999999999999999999999988754 4799999832 2 248999999999999864
Q ss_pred ---CCCCcccc-cCCCeeeecCc----h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCcc
Q 011407 170 ---AVEWEYKS-KVAGKMHACGH----D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALED 238 (486)
Q Consensus 170 ---~~~~p~~~-~~dG~l~GrG~----~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~ 238 (486)
|+..||.+ .++|++||||+ | ++++++|.+++. .+ ..+++|.++|++|||.|. |++.+..... .
T Consensus 82 ~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~ 155 (477)
T TIGR01893 82 LHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--S 155 (477)
T ss_pred CCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--C
Confidence 34456766 46899999998 5 566666665543 33 356799999999999986 9999876532 3
Q ss_pred ccEEEEEecCCC------CCcee-----EEeccCcccceeeEEEEEEEe-ecCCCCC-CCCCC-cHHHHHHHHHHHHHhh
Q 011407 239 VEAIFAVHVSHE------HPTGV-----IGSRPGPLLAGCGFFHAVISG-KKGGAAN-PHRSV-DPVLAASAAVISLQGL 304 (486)
Q Consensus 239 ~d~~i~~~~~~~------~p~g~-----i~~~~G~~~ag~~~~~i~v~G-~~~Ha~~-p~~G~-nAi~~a~~~i~~L~~l 304 (486)
.++++..++... .+.+. +.........|..+++|+++| +++|||. |+.|+ ||+..|+++|.++++.
T Consensus 156 ~~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~ 235 (477)
T TIGR01893 156 GKILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKEN 235 (477)
T ss_pred CcEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhc
Confidence 466665553110 11110 000000012377899999999 9999986 98885 9999999999999876
Q ss_pred hhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhh--cC--------------
Q 011407 305 VSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARV--FR-------------- 368 (486)
Q Consensus 305 ~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~--~g-------------- 368 (486)
. ..+++.+.||.+.|+||++|++.+|+|.......+++.+.+.+.+++.+.. .+
T Consensus 236 ~----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (477)
T TIGR01893 236 L----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKV 305 (477)
T ss_pred C----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCcccc
Confidence 2 256788899999999999999998888666666655555555554433311 00
Q ss_pred --------------------------------------------------------------------------ceeEEE
Q 011407 369 --------------------------------------------------------------------------CSATVD 374 (486)
Q Consensus 369 --------------------------------------------------------------------------~~~~v~ 374 (486)
..++++
T Consensus 306 ~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~v~ 385 (477)
T TIGR01893 306 FSENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGARVE 385 (477)
T ss_pred cCHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeEEE
Confidence 123333
Q ss_pred EecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCcc-EEEEccccCCCCCCCCCCCCCC
Q 011407 375 FFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAA-FYYIGIKNETLGSIHTGHSPYF 453 (486)
Q Consensus 375 ~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~~~~~~~~H~~dE 453 (486)
... ....+....|+|+++.+.+++++++|.++. ....+|++|+++|.+.+|.+ .+.+||+.. ++|++||
T Consensus 386 ~~~--~~~p~~~~~d~plv~~l~~a~~~~~g~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp~~~------~~H~~nE 455 (477)
T TIGR01893 386 VSA--GYPSWQPDPQSNLLDTARKVYSEMFGEDPE--VKVIHAGLECGIISSKIPDIDMISIGPNIY------DPHSPNE 455 (477)
T ss_pred Eec--CCCcccCCCCCHHHHHHHHHHHHHHCCCCe--EEEeecCccHHHHHhhCCCceEEEeCCCCC------CCCCCCc
Confidence 321 112223446899999999999999998663 46778899988888765543 455788753 5999999
Q ss_pred cCCCCchHHHHHHHHHHHHHH
Q 011407 454 MIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 454 ~i~i~~l~~~~~i~~~~i~~~ 474 (486)
++++++|.+++++++.++.+|
T Consensus 456 ~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 456 RVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred eeeHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998654
No 55
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.5e-40 Score=344.88 Aligned_cols=330 Identities=16% Similarity=0.141 Sum_probs=255.0
Q ss_pred hCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCC--CCcEEEEEeccCcccCcCCCCCcccccCCCeeeec
Q 011407 109 QNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTG--GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHAC 186 (486)
Q Consensus 109 ~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~--~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~Gr 186 (486)
+.||++++|.++++||.++|+++||+++.. .+.|+++++++. ++|+|+|+||+||||++ |..++.
T Consensus 29 ~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp~~------------g~~D~~ 95 (414)
T PRK12890 29 TRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVPNG------------GRYDGI 95 (414)
T ss_pred eeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCCCC------------CCcCCH
Confidence 444889999999999999999999999875 357999999542 36899999999999963 222222
Q ss_pred CchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC------cHHHHHHc------------------------CCC
Q 011407 187 GHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN------GAKRMMAD------------------------GAL 236 (486)
Q Consensus 187 G~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~------G~~~l~~~------------------------g~~ 236 (486)
++++++|.+++.|++.+..++++|.|++++|||.++ |++.+.+. |.
T Consensus 96 ---~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 171 (414)
T PRK12890 96 ---LGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGG- 171 (414)
T ss_pred ---HHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCC-
Confidence 478899999999999888889999999999999742 55444322 21
Q ss_pred ccccEEEE--Eec-----------CCC-----C-CceeEEeccCcccceeeEEEEEEEeecCCCCC-CC-CCCcHHHHHH
Q 011407 237 EDVEAIFA--VHV-----------SHE-----H-PTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN-PH-RSVDPVLAAS 295 (486)
Q Consensus 237 ~~~d~~i~--~~~-----------~~~-----~-p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~-p~-~G~nAi~~a~ 295 (486)
..|++.+ .+| ..+ . ..+.+. .+. .|..+++|+++|+++|++. |+ .|.|||..++
T Consensus 172 -~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~~~~i~--~~~--kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~ 246 (414)
T PRK12890 172 -DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGLPIGVV--TAI--QGIRRQAVTVEGEANHAGTTPMDLRRDALVAAA 246 (414)
T ss_pred -ChhhccccccCCCCccEEEEEeeCcCHHHHhCCCceEEE--Eee--cCcEEEEEEEEEECCCCCcCChhhccCHHHHHH
Confidence 1232221 121 100 0 111121 122 2789999999999999986 85 4589999999
Q ss_pred HHHHHHHhhhhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEE
Q 011407 296 AAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVD 374 (486)
Q Consensus 296 ~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~ 374 (486)
+++.+|+++..+.. ...+.+++.|++| .+.|+||++|++++|+|++|+++.+++.++|++++++.+...+++++++
T Consensus 247 ~~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~~~ 323 (414)
T PRK12890 247 ELVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAELEAIAAARGVRIELE 323 (414)
T ss_pred HHHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 99999998764332 3467899999974 7999999999999999999999999999999999999877777777776
Q ss_pred EecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCc
Q 011407 375 FFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFM 454 (486)
Q Consensus 375 ~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~ 454 (486)
.. ..++++..++++++.+.+++++ +|.++. ...+.|++|+++|....|.++. +||+.. ..+|++||+
T Consensus 324 ~~----~~~~~~~~~~~l~~~l~~~~~~-~g~~~~--~~~~~g~tDa~~~~~~gp~~~~-~gp~~~-----~~aHs~dE~ 390 (414)
T PRK12890 324 RL----SRSEPVPCDPALVDAVEAAAAR-LGYPSR--RMPSGAGHDAAAIARIGPSAMI-FVPCRG-----GISHNPEEA 390 (414)
T ss_pred Ee----ecCCCcCCCHHHHHHHHHHHHH-cCCCce--ecCCcccHHHHHHHhhCCEEEE-EecCCC-----CCCCCcCcc
Confidence 54 2355667789999999999988 587653 3467899999999876666543 466543 359999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHh
Q 011407 455 IDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 455 i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+++++|..++++|+.++.++.+
T Consensus 391 v~i~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 391 MDPEDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred CCHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988754
No 56
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=8.5e-40 Score=339.31 Aligned_cols=329 Identities=16% Similarity=0.192 Sum_probs=254.1
Q ss_pred CCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC-CC-CcEEEEEeccCcccCcCCCCCcccccCCCeeeecCch
Q 011407 112 ELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-GG-PPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD 189 (486)
Q Consensus 112 s~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~-~~-~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~ 189 (486)
|++++|.++++||+++|+++|++++.+ ...|+++++++ ++ +|.|+|+||+||||.+ |+.+|+.
T Consensus 25 ~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~~-- 89 (401)
T TIGR01879 25 ALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQL-- 89 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCHH--
Confidence 346789999999999999999999865 35799999954 33 5899999999999963 4555553
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCC-----cC-cHHHHHHcCC------C--c------------cccE--
Q 011407 190 AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEA-----GN-GAKRMMADGA------L--E------------DVEA-- 241 (486)
Q Consensus 190 g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~-----g~-G~~~l~~~g~------~--~------------~~d~-- 241 (486)
+++++|.+++.|++.+.+++++|.|++++|||. +. |++.+..... + . +++.
T Consensus 90 -gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 90 -GVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred -HHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 668889999999999999999999999999997 33 7777654210 0 0 1122
Q ss_pred -----------EEEEecCCC---CCcee-EEeccCcccceeeEEEEEEEeecCCCCC-CC-CCCcHHHHHHHHHHHHHhh
Q 011407 242 -----------IFAVHVSHE---HPTGV-IGSRPGPLLAGCGFFHAVISGKKGGAAN-PH-RSVDPVLAASAAVISLQGL 304 (486)
Q Consensus 242 -----------~i~~~~~~~---~p~g~-i~~~~G~~~ag~~~~~i~v~G~~~Ha~~-p~-~G~nAi~~a~~~i~~L~~l 304 (486)
.+..|...+ ++.|. ..+..+. .|..|++|+++|+++|++. |+ .|+||+..+++++.+|+++
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~~~~v~~~~--~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l 246 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQPIGVVNAI--AGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEK 246 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCCeEEEEEEe--cCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 222232110 00111 1222232 2888999999999999996 64 6899999999999999987
Q ss_pred hhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCC
Q 011407 305 VSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVY 383 (486)
Q Consensus 305 ~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~ 383 (486)
..+.. ...+.+++.|++| .+.|+||++|++.+|+|+.|+++.+++.++|++++++.+...+++++++... .+
T Consensus 247 ~~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~~~----~~ 319 (401)
T TIGR01879 247 AKRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIERWM----DE 319 (401)
T ss_pred HHhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEEee----cC
Confidence 54432 2246789999985 6799999999999999999999999999999999998877777777776652 35
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHH
Q 011407 384 PPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVG 463 (486)
Q Consensus 384 ~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~ 463 (486)
++...|+++++.+++++++ .|.++. ...+++++|+++|+...|..+ .+||+.. ..+|++||+++++++.++
T Consensus 320 ~~~~~d~~lv~~l~~a~~~-~g~~~~--~~~~~ggtDa~~~~~~~~~~v-~fgPg~~-----~~aH~~dE~v~~e~l~~~ 390 (401)
T TIGR01879 320 EPVPCSEELVAALTELCER-LGYNAR--VMVSGAGHDAQILAPIVPIGM-IFIPSIN-----GISHNPAEWSNITDCAEG 390 (401)
T ss_pred CCcCCCHHHHHHHHHHHHH-cCCCcc--ccccchHHHHHHHHhhCCEEE-EEecCCC-----CCcCCCCccCCHHHHHHH
Confidence 5667799999999999997 476653 346789999999987665543 4688764 358999999999999999
Q ss_pred HHHHHHHHHHH
Q 011407 464 AAVHATIAERF 474 (486)
Q Consensus 464 ~~i~~~~i~~~ 474 (486)
+++|+.++.++
T Consensus 391 ~~vl~~~i~~l 401 (401)
T TIGR01879 391 AKVLYLMVYQL 401 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 57
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=3.8e-40 Score=345.20 Aligned_cols=347 Identities=15% Similarity=0.076 Sum_probs=248.8
Q ss_pred HHHHHHHHHhhhCCCCCCC------------hHHHHHHHHHHHHhCCCceEecCCCceEEE--EEcCCCCcEEEEEeccC
Q 011407 98 DWLKSVRRTIHQNPELAFQ------------EFETSRLLRAELDRMEIGYKYPLAKTGIRA--WVGTGGPPFVALRADMD 163 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~------------E~~~a~~l~~~L~~~G~~v~~~~~~~nvia--~~g~~~~~~ill~gH~D 163 (486)
+++++++++|++|||++.+ +.++++||.++|+++|++++... |+.+ .++++ .|+|+|+||+|
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~---~~~~~~~~~~~-~~~l~l~gH~D 77 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENVD---NYAGYAEYGQG-EEYLGILGHLD 77 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEec---CceEEEEeCCC-CCeEEEEeecC
Confidence 4789999999999999832 36899999999999999987542 4333 33433 57999999999
Q ss_pred cccCcC-CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCc
Q 011407 164 ALPIQE-AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALE 237 (486)
Q Consensus 164 tVP~~~-~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~ 237 (486)
|||+++ |+..||.+ +++|++||||+. |++++++.|+++|++.+.+++++|.|+|++|||+|+ |+..+++.....
T Consensus 78 ~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~ 157 (447)
T TIGR01887 78 VVPAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEAP 157 (447)
T ss_pred CCCCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCCC
Confidence 999864 55567877 467999999984 889999999999999888889999999999999997 988888763211
Q ss_pred ----cccE---EEEEecC----------------------CCCCceeE-----EeccCc----------------cccee
Q 011407 238 ----DVEA---IFAVHVS----------------------HEHPTGVI-----GSRPGP----------------LLAGC 267 (486)
Q Consensus 238 ----~~d~---~i~~~~~----------------------~~~p~g~i-----~~~~G~----------------~~ag~ 267 (486)
..|. +++.+++ .++|++.+ .+..+. .+.|.
T Consensus 158 ~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~ 237 (447)
T TIGR01887 158 DIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGS 237 (447)
T ss_pred CEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceE
Confidence 1222 2322221 12333322 011000 00133
Q ss_pred e-----EEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHH--hhhhc---------------------c-cCCCCCeEEE
Q 011407 268 G-----FFHAVISGKKGGAANPHRSVDPVLAASAAVISLQ--GLVSR---------------------E-ANPLDSQVVS 318 (486)
Q Consensus 268 ~-----~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~--~l~~~---------------------~-~~~~~~~~~~ 318 (486)
. +++|+++|+++|++.|+.|+|||..|++++.+++ +...+ . ...++..++|
T Consensus 238 ~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~n 317 (447)
T TIGR01887 238 FEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMN 317 (447)
T ss_pred EEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEE
Confidence 3 7999999999999999999999999999999986 22100 0 0112456889
Q ss_pred EEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHH
Q 011407 319 VTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKK 398 (486)
Q Consensus 319 v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~ 398 (486)
++.|+|| +|+.|++.+|+|++|+++.+++.+++.+.+. +. ..+.... ..+++. ...++++++.+.+
T Consensus 318 vg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~~~-~~~p~~-~~~~~~lv~~l~~ 383 (447)
T TIGR01887 318 VGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTENG-YLKPLY-VPKDDPLVQTLMK 383 (447)
T ss_pred EEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEEcc-CCCCeE-ECCCCHHHHHHHH
Confidence 9999988 3899999999999999999987777774432 11 2222211 011222 2458899999999
Q ss_pred HHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHH
Q 011407 399 VAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIA 471 (486)
Q Consensus 399 a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i 471 (486)
++++.+|.++. +....|++|+.++ |.. +.+||..+ +...++|++||++++++|..++++|..++
T Consensus 384 ~~~~~~g~~~~--~~~~~ggtda~~~----~~~-i~~Gp~~p--G~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 384 VYEKQTGDEGT--PVAIGGGTYARLM----ENG-VAFGALFP--GEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHHHhCCCCC--eeEecchhhhhhC----CCc-EEeCCCCC--CCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 99998887652 3456777887654 332 34675422 11356999999999999999999998763
No 58
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=1.9e-39 Score=341.86 Aligned_cols=344 Identities=15% Similarity=0.175 Sum_probs=254.7
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC--C--CCcEEEEEeccCcccCcC---
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT--G--GPPFVALRADMDALPIQE--- 169 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~--~--~~~~ill~gH~DtVP~~~--- 169 (486)
.+++++++++|++|||+|++|.++++||.++|+++|++++.+. ..|+++++.. + ..|+|+|.|||||||+++
T Consensus 9 ~~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d~-~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~ 87 (485)
T PRK15026 9 PQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQ-VGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDT 87 (485)
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEe-cCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCc
Confidence 4778999999999999999999999999999999999987653 4688887631 2 358999999999999854
Q ss_pred ---CCCCcccc-cCCCeeeecCc----h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCcc
Q 011407 170 ---AVEWEYKS-KVAGKMHACGH----D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALED 238 (486)
Q Consensus 170 ---~~~~p~~~-~~dG~l~GrG~----~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~ 238 (486)
|+.+||.+ +++|++||||+ | ++++++|. +|++.+. .+++|.++|++|||.|+ |++.+... .+ .
T Consensus 88 ~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~---~l~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~~-~~-~ 161 (485)
T PRK15026 88 VHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALA---VLADENV-VHGPLEVLLTMTEEAGMDGAFGLQSN-WL-Q 161 (485)
T ss_pred cccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHH---HHHhCCC-CCCCEEEEEEcccccCcHhHHHhhhc-cC-C
Confidence 23457766 46889999998 3 34444444 4555554 37899999999999997 99988663 33 5
Q ss_pred ccEEEEEecCCCCCceeEE-eccCcc-------------cceeeEEEEEEEe-ecCCCCC-CCCCC-cHHHHHHHHHHHH
Q 011407 239 VEAIFAVHVSHEHPTGVIG-SRPGPL-------------LAGCGFFHAVISG-KKGGAAN-PHRSV-DPVLAASAAVISL 301 (486)
Q Consensus 239 ~d~~i~~~~~~~~p~g~i~-~~~G~~-------------~ag~~~~~i~v~G-~~~Ha~~-p~~G~-nAi~~a~~~i~~L 301 (486)
+|++++.+++. .|.+. .+.|.. ..|..+++|+++| +++||+. |+.|+ |||..++++|.++
T Consensus 162 ~~~~i~~e~~~---~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~ 238 (485)
T PRK15026 162 ADILINTDSEE---EGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGH 238 (485)
T ss_pred cCEEEEeCCCC---CCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHh
Confidence 89999998752 13221 111110 1256789999999 9999995 99999 9999999999985
Q ss_pred HhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHH------------------
Q 011407 302 QGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQ------------------ 363 (486)
Q Consensus 302 ~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~------------------ 363 (486)
.+. .+++++.|+||++.|+||++|++.+++|....+..+++.+.+.+.+++.
T Consensus 239 ~~~----------~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (485)
T PRK15026 239 AEE----------LDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVAND 308 (485)
T ss_pred Hhh----------CCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEcccc
Confidence 421 4678889999999999999988888888765555555444444333311
Q ss_pred --------------------------------------------------------------------------HhhcCc
Q 011407 364 --------------------------------------------------------------------------ARVFRC 369 (486)
Q Consensus 364 --------------------------------------------------------------------------~~~~g~ 369 (486)
+...|.
T Consensus 309 ~~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~ 388 (485)
T PRK15026 309 KAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGA 388 (485)
T ss_pred ccccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCc
Confidence 111111
Q ss_pred eeEEEEecCCCCCCCCC--CCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCc-cEEEEccccCCCCCCC
Q 011407 370 SATVDFFDKGNTVYPPT--VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPA-AFYYIGIKNETLGSIH 446 (486)
Q Consensus 370 ~~~v~~~~~~~~~~~~~--~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~-~~~~~G~~~~~~~~~~ 446 (486)
. ++.. ..||++ ..|+++++.+.+++++++|.++ .+....+++|++.|.++.|. .++.+||...
T Consensus 389 ~--~~~~----~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~--~~~~ihaglEcG~~~~~~p~i~~VsfGP~~~------ 454 (485)
T PRK15026 389 K--TEAK----GAYPGWQPDANSPVMHLVRETYQRLFNKTP--NIQIIHAGLECGLFKKPYPEMDMVSIGPTIT------ 454 (485)
T ss_pred E--EEEe----CCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--eEEEEEEEehHHHHHhhCCCCCEEEECCCCC------
Confidence 1 1111 234444 3579999999999999999876 35678899999999876554 2446799864
Q ss_pred CCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 447 TGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 447 ~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
.+|++||+++++++....+++..++.++
T Consensus 455 ~~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 455 GPHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred CCCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 4999999999999977777777777665
No 59
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=2.9e-39 Score=337.89 Aligned_cols=357 Identities=20% Similarity=0.157 Sum_probs=259.4
Q ss_pred HHHHHHHHhhhCCCCCCC------hHHHHHHHHHHHHhCCCceEecC--CCceEEEEEcCCCCcEEEEEeccCcccCcC-
Q 011407 99 WLKSVRRTIHQNPELAFQ------EFETSRLLRAELDRMEIGYKYPL--AKTGIRAWVGTGGPPFVALRADMDALPIQE- 169 (486)
Q Consensus 99 ~l~~ll~~lv~iPs~s~~------E~~~a~~l~~~L~~~G~~v~~~~--~~~nvia~~g~~~~~~ill~gH~DtVP~~~- 169 (486)
++++++++|++|||+++. +.++++|+.++|+++||+++... +++|+++.++.+ .++|+|+||+||||+++
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~~ 80 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNPE 80 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCcc
Confidence 578999999999998753 57899999999999999986432 457999988644 57899999999999864
Q ss_pred -CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcC--CCccccE
Q 011407 170 -AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADG--ALEDVEA 241 (486)
Q Consensus 170 -~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g--~~~~~d~ 241 (486)
|..+||.+ +++|++||||+. |+++++++|++.|++. .++++|.|+|++|||+|+ +...+++.. ....+|+
T Consensus 81 ~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~ 158 (438)
T PRK08554 81 EWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPKY 158 (438)
T ss_pred ccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCCE
Confidence 56678887 568899999984 8999999999999874 367899999999999986 444555431 1125799
Q ss_pred EEEEecCCCCCceeEEeccCcc-----------ccee---eEEEEEEEeec-CCCCCCCCCCc--HHHHHHHHHHHHHhh
Q 011407 242 IFAVHVSHEHPTGVIGSRPGPL-----------LAGC---GFFHAVISGKK-GGAANPHRSVD--PVLAASAAVISLQGL 304 (486)
Q Consensus 242 ~i~~~~~~~~p~g~i~~~~G~~-----------~ag~---~~~~i~v~G~~-~Ha~~p~~G~n--Ai~~a~~~i~~L~~l 304 (486)
+|+.+++...+. +..+.|.. ..|. .++.+++.|.+ +|++.+..|+| |+..+++++.++..+
T Consensus 159 ~iv~Ept~~~~~--~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~~ 236 (438)
T PRK08554 159 MINADGIGMKPI--IRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNVL 236 (438)
T ss_pred EEEeCCCCCcch--hhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCce
Confidence 999887543221 11111100 0122 35666777775 99998766665 588888877776543
Q ss_pred hhccc-------CCCCCeEEEEEEEecCc-----------------------------------cCccc---cCeEEEEE
Q 011407 305 VSREA-------NPLDSQVVSVTYFNGGD-----------------------------------HLDMI---PDAVVIGG 339 (486)
Q Consensus 305 ~~~~~-------~~~~~~~~~v~~i~gG~-----------------------------------~~nvI---P~~a~~~~ 339 (486)
..... .+....++++....+|. ..|++ |++|++++
T Consensus 237 ~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~ 316 (438)
T PRK08554 237 AVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKL 316 (438)
T ss_pred EEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEEE
Confidence 21000 01112233332223333 55666 99999999
Q ss_pred EEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccc
Q 011407 340 TLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAE 419 (486)
Q Consensus 340 diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~t 419 (486)
|+|+.| .+.+++.++|++++++.. .+.+++++... ..+.+.+..++++++.+++++++ +|.++ .+...+|+|
T Consensus 317 DiR~~~-~~~e~v~~~i~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~lv~~~~~~~~~-~g~~~--~~~~~~Ggt 388 (438)
T PRK08554 317 DIRAMS-YSKEDIERTLKEVLEFNL--PEAEVEIRTNE--KAGYLFTPPDEEIVKVALRVLKE-LGEDA--EPVEGPGAS 388 (438)
T ss_pred EEEecC-CCHHHHHHHHHHHhhccC--CCceEEEEecc--CCCCcCCCCChHHHHHHHHHHHH-hCCCc--EEEecCCch
Confidence 999988 688999999999886531 34555555432 12333455689999999999998 68765 456789999
Q ss_pred hHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 420 DFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 420 D~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
|+++++. .+|++. +||+.. .+|++|||+++++|.+++++|..++.+|+.
T Consensus 389 Da~~~~~~Gip~v~--~Gp~~~------~~H~~~E~v~i~~l~~~~~i~~~~i~~l~~ 438 (438)
T PRK08554 389 DSRYFTPYGVKAID--FGPKGG------NIHGPNEYVEIDSLKKMPEVYKRIALRLLG 438 (438)
T ss_pred HHHHHHhcCCCceE--ECCCCC------CCCCCcceEEHHHHHHHHHHHHHHHHHHhC
Confidence 9999965 589865 688653 599999999999999999999999988863
No 60
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-38 Score=308.54 Aligned_cols=363 Identities=18% Similarity=0.182 Sum_probs=275.4
Q ss_pred HHHHHHHHHHhhhCCCCCCC--hH-HHHHHHHHHHHhCCCceEe---cCCCceEEEEE-cCCC-CcEEEEEeccCcccCc
Q 011407 97 VDWLKSVRRTIHQNPELAFQ--EF-ETSRLLRAELDRMEIGYKY---PLAKTGIRAWV-GTGG-PPFVALRADMDALPIQ 168 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~--E~-~~a~~l~~~L~~~G~~v~~---~~~~~nvia~~-g~~~-~~~ill~gH~DtVP~~ 168 (486)
+...++.+|+++|||++-.+ -. .+++|+..+.+.+|..++. .++.++++.+| |+++ -+.|+|++|+||||+-
T Consensus 24 ~~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f 103 (420)
T KOG2275|consen 24 ENISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVF 103 (420)
T ss_pred cchHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCC
Confidence 35567778899999988643 34 8899999999999988764 34578888888 7774 4999999999999984
Q ss_pred CC--CCCcccc--cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcCCCccc
Q 011407 169 EA--VEWEYKS--KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADGALEDV 239 (486)
Q Consensus 169 ~~--~~~p~~~--~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g~~~~~ 239 (486)
.+ +..||+. ..+|.+||||+. +.+++.|.|++.|+..|.+++++|.+.|++|||.|+ |++.+.+...+++.
T Consensus 104 ~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l 183 (420)
T KOG2275|consen 104 REKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKL 183 (420)
T ss_pred cccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhccc
Confidence 33 3344444 368999999994 778899999999999999999999999999999996 99999885456666
Q ss_pred cEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhc---------ccC
Q 011407 240 EAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR---------EAN 310 (486)
Q Consensus 240 d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~---------~~~ 310 (486)
...++++.+.-.+.....+..+.+ |..|++|+++|++||+|.|.. ..|+.++.++|+.+.+.+.. ...
T Consensus 184 ~~~filDEG~~se~d~~~vfyaEk--g~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~ 260 (420)
T KOG2275|consen 184 NLGFILDEGGATENDFATVFYAEK--GPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLA 260 (420)
T ss_pred ceeEEecCCCCCcccceeEEEEee--ceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCcee
Confidence 666766654223333322222323 889999999999999998322 25677777777777766421 112
Q ss_pred CCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHH-HHHHHHHHhhcCceeEEEEecCCCCCCCC---C
Q 011407 311 PLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRI-EEVIVEQARVFRCSATVDFFDKGNTVYPP---T 386 (486)
Q Consensus 311 ~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i-~~~~~~~~~~~g~~~~v~~~~~~~~~~~~---~ 386 (486)
..+.+++|++.|+||.+.|++|++.++.+|+|..|..+..++.+++ ++.+++ .+..+++++.+.....+++ .
T Consensus 261 ~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~----~~eg~t~~f~~~~~~~~~~~t~~ 336 (420)
T KOG2275|consen 261 LGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEE----AGEGVTLEFSQKVILDYPPVTPT 336 (420)
T ss_pred ccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhh----cCCceEEeccCcccCCCCCCCCC
Confidence 2457899999999999999999999999999999999999999999 555554 4555777765431113333 2
Q ss_pred CCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHH
Q 011407 387 VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAA 465 (486)
Q Consensus 387 ~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~ 465 (486)
..+.|++..+..++++. +.+. .+...+|+||.+++.. .+|..- +.+.-+. ....|..||++..+.+.+|++
T Consensus 337 ~~s~p~w~~~~~a~~~~-~~k~--~~~i~~gstdsr~~rn~gvp~~~-fsp~~nt----~~~~H~hnE~l~~~~~l~gi~ 408 (420)
T KOG2275|consen 337 DDSNPFWTAFAGALKDE-GGKG--YPEIGPGSTDSRHIRNEGVPAIG-FSPIINT----PMLLHDHNEFLNEKVFLRGIE 408 (420)
T ss_pred CCCChHHHHHHHHHHHh-cCcc--ceeecccccccchhhhcCcchhc-ccccccc----cceecchhhhhCchhhhhhhh
Confidence 33679999999999996 4443 3678899999998865 367543 2333332 246999999999999999999
Q ss_pred HHHHHHHHH
Q 011407 466 VHATIAERF 474 (486)
Q Consensus 466 i~~~~i~~~ 474 (486)
+|..+|..+
T Consensus 409 ~~~~~i~~~ 417 (420)
T KOG2275|consen 409 IYYTIIVNL 417 (420)
T ss_pred HHHHHHHhh
Confidence 999987665
No 61
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=3.6e-37 Score=332.28 Aligned_cols=348 Identities=14% Similarity=0.138 Sum_probs=273.6
Q ss_pred cchHHHHHHHHHHhhhCCCC-------------CCChHHHHHHHHHHHHhCCCc-eEecCCCceEEEEE-cCC-CCcEEE
Q 011407 94 PETVDWLKSVRRTIHQNPEL-------------AFQEFETSRLLRAELDRMEIG-YKYPLAKTGIRAWV-GTG-GPPFVA 157 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~-------------s~~E~~~a~~l~~~L~~~G~~-v~~~~~~~nvia~~-g~~-~~~~il 157 (486)
+.+.+++++.+..|-+|+.+ |..+.++++|+.+||+++|++ ++.+. -.||++++ |.+ +.|+|+
T Consensus 177 ~~~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~-~gNv~~~~~g~~~~~p~v~ 255 (591)
T PRK13799 177 PAIGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDA-VGNVVGRYKAADDDAKTLI 255 (591)
T ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECC-CCCEEEEcCCCCCCCCeEE
Confidence 35567788888888888631 224568999999999999998 98754 58999999 443 369999
Q ss_pred EEeccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc-----C-cHHHHH
Q 011407 158 LRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG-----N-GAKRMM 231 (486)
Q Consensus 158 l~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g-----~-G~~~l~ 231 (486)
+.+|+||||. +|+.+|+ .++++.|.+++.|++.+.+++++|.++...+||+. . |++.+.
T Consensus 256 ~gSHlDTV~~------------gG~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~ 320 (591)
T PRK13799 256 TGSHYDTVRN------------GGKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALI 320 (591)
T ss_pred EeccccccCC------------CCccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHh
Confidence 9999999984 4788777 57788999999999999999999999999999983 2 555554
Q ss_pred --------H----cCC---------------C-------ccccEEEEEecCCC-------CCceeEEeccCcccceeeEE
Q 011407 232 --------A----DGA---------------L-------EDVEAIFAVHVSHE-------HPTGVIGSRPGPLLAGCGFF 270 (486)
Q Consensus 232 --------~----~g~---------------~-------~~~d~~i~~~~~~~-------~p~g~i~~~~G~~~ag~~~~ 270 (486)
+ +|. . .++++.+.+|...+ .+.|. ..|. +|..++
T Consensus 321 G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igv---V~g~--~G~~~~ 395 (591)
T PRK13799 321 GDFNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGI---VTSI--AGSARY 395 (591)
T ss_pred CCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEE---Eeee--ccceEE
Confidence 1 122 0 13345555654332 23333 2332 388999
Q ss_pred EEEEEeecCCCCC-CC-CCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChh
Q 011407 271 HAVISGKKGGAAN-PH-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNT 347 (486)
Q Consensus 271 ~i~v~G~~~Ha~~-p~-~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~ 347 (486)
+|+++|+++|+|. |+ .++||+..+++++..++++..+. +....+.+||.|+++ .+.|+||++|++++|+|++|.+
T Consensus 396 ~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e 473 (591)
T PRK13799 396 ICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDE 473 (591)
T ss_pred EEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHH
Confidence 9999999999997 64 58999999999999999875442 212357889988853 4899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh
Q 011407 348 SFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV 427 (486)
Q Consensus 348 ~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~ 427 (486)
+.+++.+++++.+++.+..+++.+++++.. .+++..+|+++++.+.+++++ +|.+.. ...+++++|+++|+..
T Consensus 474 ~~e~l~~~i~~~i~~ia~~~g~~~ei~~~~----~~~~~~~d~~lv~~~~~a~~~-~G~~~~--~~~sgag~Da~~~a~~ 546 (591)
T PRK13799 474 IRDAAVADILAEIAAIAARRGIEYKAELAM----KAAAAPCAPELMKQLEAATDA-AGVPLF--ELASGAGHDAMKIAEI 546 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeEEEEEEe----cCCCcCCCHHHHHHHHHHHHH-cCCCce--ecCcchHHHHHHHHhh
Confidence 999999999999999988888888777652 345677899999999999887 687652 3567889999999988
Q ss_pred cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 428 VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 428 ~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+|..++++++++. ..+|+++|+++++++..++++|..++.++..
T Consensus 547 ~p~amif~~~g~~-----g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 547 MDQAMLFTRCGNA-----GISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred CCEEEEEEecCCC-----CCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 8877766665542 2489999999999999999999999988754
No 62
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=3.3e-37 Score=319.79 Aligned_cols=346 Identities=13% Similarity=0.144 Sum_probs=263.7
Q ss_pred HHHHHHHHHhhhC-CCC---------CCChHHHHHHHHHHHHhCCCceEecCCCceEEEEE-cCC-CCcEEEEEeccCcc
Q 011407 98 DWLKSVRRTIHQN-PEL---------AFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV-GTG-GPPFVALRADMDAL 165 (486)
Q Consensus 98 ~~l~~ll~~lv~i-Ps~---------s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~-g~~-~~~~ill~gH~DtV 165 (486)
+++++.+.+|-+| ... |..+.++++||.+||+++|++++.+. -.|+++++ |.. +.|.|++.+|+|||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D~-~gN~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFDD-VGNLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEecCCCCCCCeEEEeccccCC
Confidence 4566666666665 221 33578899999999999999998764 47999999 444 35899999999999
Q ss_pred cCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc-----C-cHHHHHH-------
Q 011407 166 PIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG-----N-GAKRMMA------- 232 (486)
Q Consensus 166 P~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g-----~-G~~~l~~------- 232 (486)
|.+ |+.- |. .++++.|.+++.|++.+..++++|.+++..+||++ - |++.+..
T Consensus 82 ~~g------------G~~d--g~-~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNG------------GNLD--GQ-FGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCC------------CccC--ch-hhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 953 2211 12 35667889999999999999999999999999986 2 5554431
Q ss_pred -----------------cCC--------CccccEEEEEecC--CCCC-ce-eEEeccCcccceeeEEEEEEEeecCCCCC
Q 011407 233 -----------------DGA--------LEDVEAIFAVHVS--HEHP-TG-VIGSRPGPLLAGCGFFHAVISGKKGGAAN 283 (486)
Q Consensus 233 -----------------~g~--------~~~~d~~i~~~~~--~~~p-~g-~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~ 283 (486)
.|+ ..++++.+.+|.. +... .| .+++..+.. |..+++|+++|+++|+|.
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~igiv~~~~--G~~~~~v~v~GkaaHag~ 224 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQSIGVVNAIV--GQRRYTVNLKGEANHAGT 224 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCeEEEEeecc--cceEEEEEEEEECCCCCC
Confidence 111 0134566677763 2211 11 133333333 888999999999999998
Q ss_pred CCC--CCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEe-cCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHH
Q 011407 284 PHR--SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFN-GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVI 360 (486)
Q Consensus 284 p~~--G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~-gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~ 360 (486)
|+. ++||+.++++++.+|+.+..+. ....++++|.|+ +|.+.|+||++|++++|+|++|.++.+++.++|++.+
T Consensus 225 ~p~~~r~dAi~aaa~~i~~l~~~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i 301 (406)
T TIGR03176 225 TPMSYRRDTVYAFSRICTQSIERAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDM 301 (406)
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 443 4899999999999998874332 133589999999 5788999999999999999999999999999999999
Q ss_pred HHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccC
Q 011407 361 VEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNE 440 (486)
Q Consensus 361 ~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~ 440 (486)
++.+..++++++++... . .++...|+++++.+++++++. +... ....+.+++|+++|.+.+|+++.+ ||+.+
T Consensus 302 ~~ia~~~g~~~ei~~~~---~-~~p~~~d~~lv~~l~~a~~~~-~~~~--~~~~sggg~Da~~~~~~vP~~~if-gp~~~ 373 (406)
T TIGR03176 302 KAIADEMDITIDIDLWM---D-EAPVPMNKEIVAIIEQLAKAE-KLNY--RLMHSGAGHDAQIFAPRVPTAMIF-VPSIG 373 (406)
T ss_pred HHHHHHcCCeEEEEEEe---c-CCCCCCCHHHHHHHHHHHHHc-CCCc--eecCcccHHHHHHHHHHCCEEEEE-EeCCC
Confidence 99988888888776532 1 233456899999999999985 4433 245678899999999889987654 55432
Q ss_pred CCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 441 TLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 441 ~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
..+|+++|+++++++..++++|+.++.+++++
T Consensus 374 -----g~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~~ 405 (406)
T TIGR03176 374 -----GISHNPAERTNIEDLVEGVKTLADMLYELAYK 405 (406)
T ss_pred -----CCCCCccccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 25899999999999999999999999998763
No 63
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.4e-36 Score=328.05 Aligned_cols=346 Identities=11% Similarity=0.097 Sum_probs=269.3
Q ss_pred chHHHHHHHHHHhhhCCCCC-------------CChHHHHHHHHHHHHhCCC-ceEecCCCceEEEEEc-CCC-CcEEEE
Q 011407 95 ETVDWLKSVRRTIHQNPELA-------------FQEFETSRLLRAELDRMEI-GYKYPLAKTGIRAWVG-TGG-PPFVAL 158 (486)
Q Consensus 95 ~~~~~l~~ll~~lv~iPs~s-------------~~E~~~a~~l~~~L~~~G~-~v~~~~~~~nvia~~g-~~~-~~~ill 158 (486)
...+++++.+..|-+|+... ..+.++++||.+||+++|+ +++.+. -.|+++++. .++ .|+|++
T Consensus 178 ~~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D~-~GNl~~~~~g~~~~~~~v~~ 256 (591)
T PRK13590 178 VLGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHIDA-VGNVVGRYKGSTPQAKRLLT 256 (591)
T ss_pred hHHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeECC-CCCEEEEecCCCCCCCeEEE
Confidence 34567778888888886532 2356899999999999999 887654 589999984 343 489999
Q ss_pred EeccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc-----C-cHHH---
Q 011407 159 RADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG-----N-GAKR--- 229 (486)
Q Consensus 159 ~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g-----~-G~~~--- 229 (486)
.+|+||||. +|+.+|+ +++++.|.+++.|++.+..++++|.|+++++||++ . |++.
T Consensus 257 gsHlDTV~~------------gG~~DG~---~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G 321 (591)
T PRK13590 257 GSHYDTVRN------------GGKYDGR---LGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIG 321 (591)
T ss_pred ecccccCCC------------CCCcccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhC
Confidence 999999984 3566665 57788999999999999999999999999999973 1 4443
Q ss_pred -----HHH---------------cCC----C-------ccccEEEEEecCCC-------CCceeEEeccCcccceeeEEE
Q 011407 230 -----MMA---------------DGA----L-------EDVEAIFAVHVSHE-------HPTGVIGSRPGPLLAGCGFFH 271 (486)
Q Consensus 230 -----l~~---------------~g~----~-------~~~d~~i~~~~~~~-------~p~g~i~~~~G~~~ag~~~~~ 271 (486)
+++ .|+ + +.+++.+.+|...+ .+.|.+ .+. .|..+++
T Consensus 322 ~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV---~~~--~G~~~~~ 396 (591)
T PRK13590 322 DFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIV---TSI--NGSVRYV 396 (591)
T ss_pred CChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEEE---eee--eccEEEE
Confidence 222 111 0 12345566665432 122332 222 2889999
Q ss_pred EEEEeecCCCCC-CCC-CCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEec-CccCccccCeEEEEEEEeCCChhh
Q 011407 272 AVISGKKGGAAN-PHR-SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNG-GDHLDMIPDAVVIGGTLRAFSNTS 348 (486)
Q Consensus 272 i~v~G~~~Ha~~-p~~-G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~g-G~~~nvIP~~a~~~~diR~~p~~~ 348 (486)
|+++|+++|+|. |+. +.||+..+++++..++++... ....+.+||.+.+ |.+.|+||++|++++|+|+.+.++
T Consensus 397 v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~ 472 (591)
T PRK13590 397 GEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQ 472 (591)
T ss_pred EEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHH
Confidence 999999999997 654 689999999999999886422 1234679999873 668999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhc
Q 011407 349 FYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVV 428 (486)
Q Consensus 349 ~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~ 428 (486)
.+++.++|++.+++.+...+++++++.. ..+++..+|+++++.+.+++++ +|.+.. ...+++++|+++++..+
T Consensus 473 ~e~v~~~i~~~i~~ia~~~g~~vei~~~----~~~~~~~~d~~lv~~~~~aa~~-~G~~~~--~~~sggg~Da~~~a~~~ 545 (591)
T PRK13590 473 RDAMVADVLAELEAICERRGLRYTLEET----MRAAAAPSAPAWQQRWEAAVAA-LGLPLF--RMPSGAGHDAMKLHEIM 545 (591)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEEEe----ecCCCcCCCHHHHHHHHHHHHH-cCCCcc--cCCcchhHHHHHHHHHC
Confidence 9999999999999998888888888765 2355677899999999999988 687653 35678999999999888
Q ss_pred CccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 429 PAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 429 p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
|+.++ +||+... ..+|+++|+++++++..++++|..++.+++..
T Consensus 546 p~~mi-fgpg~~~----g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~~ 589 (591)
T PRK13590 546 PQAML-FVRGENA----GISHNPLESSTADDMQLAVQAFQHLLDQLAAE 589 (591)
T ss_pred CEEEE-EEeeCCC----CCCCCCccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 87654 5665421 35899999999999999999999999988754
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.90 E-value=5.3e-23 Score=209.35 Aligned_cols=351 Identities=17% Similarity=0.190 Sum_probs=263.9
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceE-ec-------CC--Cce-EEEEEcCC-C-CcEEEEEecc
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYK-YP-------LA--KTG-IRAWVGTG-G-PPFVALRADM 162 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~-~~-------~~--~~n-via~~g~~-~-~~~ill~gH~ 162 (486)
..+++++.+.++++||+.|++|.+++.++.+|++.+|+.++ .. +. ..| +.+++.+. + =|++.|.+|+
T Consensus 3 ~~~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~ 82 (414)
T COG2195 3 KMERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHH 82 (414)
T ss_pred chHHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccccc
Confidence 36789999999999999999999999999999999999883 11 11 122 44445432 2 3889999999
Q ss_pred CcccC-------cCC----CC-------------C-ccccc-----CCCeee-----ecCch--HHHHHHHHHHHHHHhc
Q 011407 163 DALPI-------QEA----VE-------------W-EYKSK-----VAGKMH-----ACGHD--AHVAMLIGAAKILKSR 205 (486)
Q Consensus 163 DtVP~-------~~~----~~-------------~-p~~~~-----~dG~l~-----GrG~~--g~~a~~l~aa~~L~~~ 205 (486)
||+|. +++ .+ . .+.|. .++.+. ..|+| .+.+.++.++..+++.
T Consensus 83 Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~ 162 (414)
T COG2195 83 DTVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREK 162 (414)
T ss_pred cccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhc
Confidence 99962 111 00 0 12221 111222 23444 6677788888888865
Q ss_pred C-CCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCC
Q 011407 206 E-HLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN 283 (486)
Q Consensus 206 g-~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~ 283 (486)
. ..+.++|.+.|+++||.|+ |+..+.-.. | .+++.+..+ +.+.|.+....- +...+++++.|+.+|++.
T Consensus 163 ~~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~-f-~a~~ay~iD---Gg~~g~i~~ea~----~~~~~~~~~~g~~~h~~~ 233 (414)
T COG2195 163 HPEIPHGGIRGGFSPDEEIGGRGAANKDVAR-F-LADFAYTLD---GGPVGEIPREAF----NAAAVRATIVGPNVHPGS 233 (414)
T ss_pred CccccccCeEEEecchHHhhhhhhhhccHHh-h-hcceeEecC---CCccCeeeeecc----chheeeeeeeccCcCccc
Confidence 3 4578999999999999996 888776552 3 367777666 234566543211 456789999999999997
Q ss_pred -CCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHH
Q 011407 284 -PHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE 362 (486)
Q Consensus 284 -p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~ 362 (486)
+...+||+..+.++...+...... ..++.+.|..+++...|.|.+++.....+|.......+...+.+++.+++
T Consensus 234 a~~~~i~a~~~a~e~~~~~~~~~~~-----e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~ 308 (414)
T COG2195 234 AKGKMINALLLAAEFILELPLEEVP-----ELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEE 308 (414)
T ss_pred hHHHHhhHHHhhhhhhhcCCccccc-----ccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHH
Confidence 777889999888887766533211 23556778999999999999999999999999999999999999999999
Q ss_pred HHhhcC--ceeEEEEecCCCCCCCCC--CCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEcc
Q 011407 363 QARVFR--CSATVDFFDKGNTVYPPT--VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGI 437 (486)
Q Consensus 363 ~~~~~g--~~~~v~~~~~~~~~~~~~--~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~ 437 (486)
.++.++ ..++++... .||.+ ..+++++..++++++++ +.++. ...+.||+|++.++. ..|+..+++||
T Consensus 309 ~~~~~g~~~~~~~~~~~----~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p~--v~~i~gGtd~~~is~~g~p~~~i~~Gp 381 (414)
T COG2195 309 MAASLGKLAGAELEVKD----SYPGWKIKPDSPLVDLAKKAYKEL-GIKPK--VKPIHGGTDGGVLSFKGLPTPNISTGP 381 (414)
T ss_pred HHHHhhhccceEEEEec----cccCcCCCCCchHHHHHHHHHHHh-CCCce--EEEeecccchhhhhccCCCCceEeccc
Confidence 998888 677777763 45544 45788999999999996 55553 478899999998876 48898889998
Q ss_pred ccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 438 KNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 438 ~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
. ...|+++|+++++++.+..+++..++..+
T Consensus 382 -~------~n~Hs~~E~v~I~s~ek~~~~l~~l~~~~ 411 (414)
T COG2195 382 -G------ENPHSPDEFVSIESMEKAVQVLVELLKLA 411 (414)
T ss_pred -c------cCCCCccceeehHHHHHHHHHHHHHHHHh
Confidence 3 25999999999999999999998887654
No 65
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.87 E-value=7.4e-22 Score=183.09 Aligned_cols=175 Identities=26% Similarity=0.393 Sum_probs=134.6
Q ss_pred EEEeccCcccCcCCCCC---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cH
Q 011407 157 ALRADMDALPIQEAVEW---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GA 227 (486)
Q Consensus 157 ll~gH~DtVP~~~~~~~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~ 227 (486)
+|++|||||| + .+.| ||.+ .++|++||||++ +++++++.+++.|++.+.+++++|.|+|+++||+|+ |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 3 4445 5554 578999999994 889999999999998889999999999999999997 99
Q ss_pred HHHHHcCCC--ccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhh
Q 011407 228 KRMMADGAL--EDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLV 305 (486)
Q Consensus 228 ~~l~~~g~~--~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~ 305 (486)
+.+++++.. ..+|+++..+++.. +. . .
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~e~~~~---------------~~--~-~--------------------------------- 107 (189)
T PF01546_consen 79 KHLLEEGAFFGLHPDYVIIGEPTGK---------------GG--V-G--------------------------------- 107 (189)
T ss_dssp HHHHHHCEEEEEEESEEEECECETT---------------SE--E-E---------------------------------
T ss_pred hhhhhhccccccccccccccccccc---------------cc--c-c---------------------------------
Confidence 999998521 23566654443211 00 0 0
Q ss_pred hcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCC
Q 011407 306 SREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP 385 (486)
Q Consensus 306 ~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~ 385 (486)
T Consensus 108 -------------------------------------------------------------------------------- 107 (189)
T PF01546_consen 108 -------------------------------------------------------------------------------- 107 (189)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh--hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHH
Q 011407 386 TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVG 463 (486)
Q Consensus 386 ~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~ 463 (486)
...++++++.+.++++++++... .+..+++++|++++.. ..+..+..+||+.. .+|++||+++++++.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~i~~G~~~~------~~H~~~E~i~~~~l~~~ 179 (189)
T PF01546_consen 108 SDNDPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGLGIPAIGFGPGGS------NAHTPDEYIDIEDLVKG 179 (189)
T ss_dssp HCTCHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHTTEEEEEEESCEE------STTSTT-EEEHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhccccceeeeCCCCC------CCCCCCcEecHHHHHHH
Confidence 23578899999999999755232 4678899999999985 34444556788763 59999999999999999
Q ss_pred HHHHHHHHH
Q 011407 464 AAVHATIAE 472 (486)
Q Consensus 464 ~~i~~~~i~ 472 (486)
+++|+.++.
T Consensus 180 ~~~~~~~l~ 188 (189)
T PF01546_consen 180 AKIYAALLE 188 (189)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999886
No 66
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.68 E-value=4e-16 Score=132.05 Aligned_cols=101 Identities=22% Similarity=0.330 Sum_probs=92.6
Q ss_pred eeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhccc-----CCCCCeEEEEEEEecCccCccccCeEEEEEE
Q 011407 266 GCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA-----NPLDSQVVSVTYFNGGDHLDMIPDAVVIGGT 340 (486)
Q Consensus 266 g~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~-----~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~d 340 (486)
|..+++|+++|+++|+|.|+.|+||+..+++++.+|+++..+.. ......+++++.++||.+.|+||++|+++++
T Consensus 5 G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~~~~ 84 (111)
T PF07687_consen 5 GVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATLTVD 84 (111)
T ss_dssp EEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEEEEE
T ss_pred CEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEEEEE
Confidence 88899999999999999999999999999999999998864432 4456789999999999999999999999999
Q ss_pred EeCCChhhHHHHHHHHHHHHHHHHhh
Q 011407 341 LRAFSNTSFYQLLQRIEEVIVEQARV 366 (486)
Q Consensus 341 iR~~p~~~~~~v~~~i~~~~~~~~~~ 366 (486)
+|++|.++.+++.++|++.+++.+.+
T Consensus 85 ~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 85 IRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcchHHHHHHHHHHHHHHhhhC
Confidence 99999999999999999999997654
No 67
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.67 E-value=2.2e-15 Score=149.50 Aligned_cols=259 Identities=14% Similarity=0.179 Sum_probs=166.7
Q ss_pred HHHHHHHHHHhhhCCCCCC--ChHHHHHHHHHHHHhCCC-ceE-----e----cC--CCceEEEEEcC-CCCcEEEEEec
Q 011407 97 VDWLKSVRRTIHQNPELAF--QEFETSRLLRAELDRMEI-GYK-----Y----PL--AKTGIRAWVGT-GGPPFVALRAD 161 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~--~E~~~a~~l~~~L~~~G~-~v~-----~----~~--~~~nvia~~g~-~~~~~ill~gH 161 (486)
.+++.++.-.|++-||+.| .|...+++|...|.++.+ +-+ . .+ +|.||+|.+.+ ++.+||++.||
T Consensus 7 ~e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH 86 (553)
T COG4187 7 SERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGH 86 (553)
T ss_pred HHHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeec
Confidence 6888899999999999987 578899999999998863 221 1 12 68899999844 45699999999
Q ss_pred cCcccCcCC---CCCcccc----------------------cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceE
Q 011407 162 MDALPIQEA---VEWEYKS----------------------KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTV 213 (486)
Q Consensus 162 ~DtVP~~~~---~~~p~~~----------------------~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I 213 (486)
+|||.+.+. .+..|+| +.+++|+|||+. .++|+.|++++.+.+. ...+|||
T Consensus 87 ~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNl 165 (553)
T COG4187 87 FDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNL 165 (553)
T ss_pred cceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcE
Confidence 999987553 2334433 224689999994 6777888888888776 4689999
Q ss_pred EEEeecCCCCcC-cHHHHHHc--CCCc--ccc--EEEEEecCCCCCce---eEEeccCcccceeeEEEEEEEeecCCCCC
Q 011407 214 ILIFQPAEEAGN-GAKRMMAD--GALE--DVE--AIFAVHVSHEHPTG---VIGSRPGPLLAGCGFFHAVISGKKGGAAN 283 (486)
Q Consensus 214 ~~~~~~dEE~g~-G~~~l~~~--g~~~--~~d--~~i~~~~~~~~p~g---~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~ 283 (486)
.|+.+||||..+ |++..+.. ++-+ +.+ ++|..+.....-.| .. +..|+. |..---.-+.|...|+|.
T Consensus 166 Lf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ry-vYtGti--GKLLp~f~vvG~etHvG~ 242 (553)
T COG4187 166 LFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRY-VYTGTI--GKLLPFFFVVGCETHVGY 242 (553)
T ss_pred EEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceE-EEeccc--hhhcceeEEEeeccccCC
Confidence 999999999987 88766542 1111 233 44444443222222 22 122322 332233567899999999
Q ss_pred CCCCCcHHHHHHHHHHHHHhhh---hcccCCCC-CeEEEEEEEecCccCcc-ccCeEEEEEEEeCCChhhHHHHHHHHHH
Q 011407 284 PHRSVDPVLAASAAVISLQGLV---SREANPLD-SQVVSVTYFNGGDHLDM-IPDAVVIGGTLRAFSNTSFYQLLQRIEE 358 (486)
Q Consensus 284 p~~G~nAi~~a~~~i~~L~~l~---~~~~~~~~-~~~~~v~~i~gG~~~nv-IP~~a~~~~diR~~p~~~~~~v~~~i~~ 358 (486)
|..|+||...+++++++|+-.. ++...... ++++ .-.-.=-.+.|| -|..+.+.|++=+. ..+..++.+++++
T Consensus 243 ~f~Gvnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~-L~qkDlKe~Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~~ 320 (553)
T COG4187 243 PFEGVNANFMASEITRRLELNADLADRVDGEITPPPSC-LEQKDLKESYNVQTPERAWLYFNWLYH-SRTAKELFDRLKE 320 (553)
T ss_pred cccCCCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHh-hhhhhhhhhccccCcchhhhhheehhh-cCCHHHHHHHHHH
Confidence 9999999999999999986432 22211100 0111 000000123343 47777777777554 3344444444444
Q ss_pred HHH
Q 011407 359 VIV 361 (486)
Q Consensus 359 ~~~ 361 (486)
.++
T Consensus 321 ~a~ 323 (553)
T COG4187 321 EAE 323 (553)
T ss_pred HHH
Confidence 433
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.62 E-value=9.2e-14 Score=140.37 Aligned_cols=129 Identities=22% Similarity=0.246 Sum_probs=104.7
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC-CCCcEEEEEeccCcccC-----cC-
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-GGPPFVALRADMDALPI-----QE- 169 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~-~~~~~ill~gH~DtVP~-----~~- 169 (486)
.+.+++++++|+++||+|++|.+++++|.++|+++|++++.+ ...|+++.+.+ .++|+|+|.||||+|.. .+
T Consensus 2 ~~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~D-~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~ 80 (343)
T TIGR03106 2 TDYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYELT-RRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDN 80 (343)
T ss_pred hHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEC-CCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCC
Confidence 356889999999999999999999999999999999998864 57899998743 34589999999999973 11
Q ss_pred ----------C----------------C-------C-C---------------ccc------------------------
Q 011407 170 ----------A----------------V-------E-W---------------EYK------------------------ 176 (486)
Q Consensus 170 ----------~----------------~-------~-~---------------p~~------------------------ 176 (486)
+ . . . +++
T Consensus 81 G~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~G 160 (343)
T TIGR03106 81 GRLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVG 160 (343)
T ss_pred CeEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCC
Confidence 0 0 0 0 000
Q ss_pred ------c----cCCCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcCc
Q 011407 177 ------S----KVAGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNG 226 (486)
Q Consensus 177 ------~----~~dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~G 226 (486)
+ ..+|++|||+.| +++++++.+++.|++.+..++.+|.++|+++||.|.|
T Consensus 161 d~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~g 222 (343)
T TIGR03106 161 DFVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSG 222 (343)
T ss_pred CEEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCcc
Confidence 0 134678999987 8899999999999988777899999999999999976
No 69
>PRK09961 exoaminopeptidase; Provisional
Probab=99.54 E-value=5.5e-13 Score=135.10 Aligned_cols=249 Identities=16% Similarity=0.173 Sum_probs=166.3
Q ss_pred HHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcccC-------------
Q 011407 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPI------------- 167 (486)
Q Consensus 101 ~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~------------- 167 (486)
+++|++|+++||+|++|.++++++.++|+++|++++. +...|+++++++.++|+|+|.||||+|+.
T Consensus 3 ~~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~-D~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~ 81 (344)
T PRK09961 3 LSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRF-DGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDV 81 (344)
T ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEE
Confidence 3679999999999999999999999999999999876 46789999874443579999999999983
Q ss_pred ---cCCC---------------C-------------Cccc---------c-----------------------cCCCeee
Q 011407 168 ---QEAV---------------E-------------WEYK---------S-----------------------KVAGKMH 184 (486)
Q Consensus 168 ---~~~~---------------~-------------~p~~---------~-----------------------~~dG~l~ 184 (486)
|.++ + .++. + ..++++.
T Consensus 82 ~~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~ 161 (344)
T PRK09961 82 LPVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVM 161 (344)
T ss_pred EeCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEE
Confidence 1100 0 0010 0 0112344
Q ss_pred ecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEEeccC
Q 011407 185 ACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPG 261 (486)
Q Consensus 185 GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G 261 (486)
|+.-| .++++++.+++.+++. +++.+|.++|+..||.|. |++..... + .+|++|++|.++
T Consensus 162 gkalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i-~pd~~I~vDv~~------------ 224 (344)
T PRK09961 162 GKAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTAC------------ 224 (344)
T ss_pred EeechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc--c-CCCEEEEEeccC------------
Confidence 55444 6778888888888754 478999999999999997 77766553 2 578888766321
Q ss_pred cccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEE
Q 011407 262 PLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTL 341 (486)
Q Consensus 262 ~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~di 341 (486)
|.-.|.... .+...+.+|
T Consensus 225 ------------------~~d~~~~~~----------------------------~~~~~lg~G---------------- 242 (344)
T PRK09961 225 ------------------WAKNFDYGA----------------------------ANHRQIGNG---------------- 242 (344)
T ss_pred ------------------CCCCCCCCC----------------------------CcccccCCC----------------
Confidence 000011000 000011111
Q ss_pred eCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchH
Q 011407 342 RAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDF 421 (486)
Q Consensus 342 R~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~ 421 (486)
.-+.+.+ . ....+.++++.+++++++. +.+.. ......++||+
T Consensus 243 -----------------------------p~i~~~D---~---~~i~~~~l~~~l~~~A~~~-~Ip~Q-~~~~~ggGTDa 285 (344)
T PRK09961 243 -----------------------------PMLVLSD---K---SLIAPPKLTAWIETVAAEI-GIPLQ-ADMFSNGGTDG 285 (344)
T ss_pred -----------------------------ceEEEcc---C---CcCCCHHHHHHHHHHHHHc-CCCcE-EEecCCCcchH
Confidence 1111111 1 1235788888888888884 65432 11234567999
Q ss_pred HHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 422 SFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 422 ~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
+.+.. .+|++. +|++.. .+|+++|+++++++..+++++..++..+
T Consensus 286 ~~~~~~~~Giptv~--ig~p~r------y~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 286 GAVHLTGTGVPTVV--MGPATR------HGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred HHHHHhCCCCCEEE--echhhh------cccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 97654 478765 466543 4999999999999999999999998554
No 70
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.45 E-value=1.4e-12 Score=130.29 Aligned_cols=122 Identities=17% Similarity=0.209 Sum_probs=93.9
Q ss_pred hhhCCCCCCChHHHHHHHHHHHHhCCCceEec-----------C--------CCceEEEEEcCCCCcEEEEEeccCcccC
Q 011407 107 IHQNPELAFQEFETSRLLRAELDRMEIGYKYP-----------L--------AKTGIRAWVGTGGPPFVALRADMDALPI 167 (486)
Q Consensus 107 lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~-----------~--------~~~nvia~~g~~~~~~ill~gH~DtVP~ 167 (486)
+-.-+.-|..|.++++||+++|+++|++++.. . .+.||++++.+...+.|++.||+|||+.
T Consensus 44 ~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill~AH~DTV~p 123 (346)
T PRK10199 44 FPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAP 123 (346)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEEEEEcCcCCC
Confidence 33344556788999999999999999987531 1 1357999995444588999999999974
Q ss_pred cCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHc
Q 011407 168 QEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMAD 233 (486)
Q Consensus 168 ~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~ 233 (486)
.....+++.. +| ++++|++ ++++++|.+++.|++. +++.+|.|+++++||.|. |++.+++.
T Consensus 124 ~~~~~~~~~~--~g-~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 124 QSDADVDANL--GG-LTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred CCCCccccCC--CC-cccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHh
Confidence 3323333332 23 6889985 8899999999999865 467899999999999997 99999886
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.33 E-value=3e-10 Score=113.85 Aligned_cols=144 Identities=25% Similarity=0.309 Sum_probs=106.0
Q ss_pred HHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC-CCCcEEEEEeccCcccC------cCC
Q 011407 98 DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-GGPPFVALRADMDALPI------QEA 170 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~-~~~~~ill~gH~DtVP~------~~~ 170 (486)
++++++|++|..+|++||.|.++.+++.++|++++.+++.+ ...|++++.++ .+.|.+++.+|||.|-. .+.
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~D-~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEVD-RLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEEc-CCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 56789999999999999999999999999999999998764 56899999965 32366999999999863 110
Q ss_pred -------CCC-c-----------------cc------c------c-----------------------------------
Q 011407 171 -------VEW-E-----------------YK------S------K----------------------------------- 178 (486)
Q Consensus 171 -------~~~-p-----------------~~------~------~----------------------------------- 178 (486)
-+| | +. | .
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 011 0 00 0 0
Q ss_pred ---------CCCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEe
Q 011407 179 ---------VAGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVH 246 (486)
Q Consensus 179 ---------~dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~ 246 (486)
.++++-++.=| .+|++++.+++.| + +.+++.++.|+|++.||.|- |++..... + ++|++|..+
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~--i-~pd~aiavd 235 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR--I-KPDIAIAVD 235 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc--c-CCCEEEEEe
Confidence 00111122222 6788999999999 4 77899999999999999996 77665543 2 578888766
Q ss_pred c
Q 011407 247 V 247 (486)
Q Consensus 247 ~ 247 (486)
.
T Consensus 236 ~ 236 (355)
T COG1363 236 V 236 (355)
T ss_pred c
Confidence 4
No 72
>PRK09864 putative peptidase; Provisional
Probab=99.32 E-value=4.6e-10 Score=113.41 Aligned_cols=247 Identities=15% Similarity=0.115 Sum_probs=162.2
Q ss_pred HHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcccC------cCC----
Q 011407 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPI------QEA---- 170 (486)
Q Consensus 101 ~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~------~~~---- 170 (486)
++++++|.++|++||.|.++++++.++|+.++.+++.+ .-.|+++..+ ..+++|+|.+|||+|+- .+.
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~D-~~GNli~~~g-~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFD-GLGSFVARKG-NKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEeC-CCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 46799999999999999999999999999999998664 4679999864 33579999999999972 110
Q ss_pred ---CCC------------------ccc--------------------------------c--------------------
Q 011407 171 ---VEW------------------EYK--------------------------------S-------------------- 177 (486)
Q Consensus 171 ---~~~------------------p~~--------------------------------~-------------------- 177 (486)
-+| ++. +
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 001 000 0
Q ss_pred ---cCCCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCC
Q 011407 178 ---KVAGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEH 251 (486)
Q Consensus 178 ---~~dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~ 251 (486)
..++++.|+.-| .++++++.+++.|++ ++.++.++|++.||.|- |++..... + ++|.+|++|.++.
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~--i-~PDiaIavDvt~~- 232 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH--I-KPDVVIVLDTAVA- 232 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc--C-CCCEEEEEecccC-
Confidence 001123333333 678888888888864 77999999999999996 88876654 3 5899998774321
Q ss_pred CceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccc
Q 011407 252 PTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMI 331 (486)
Q Consensus 252 p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvI 331 (486)
+. .|.... .. . ...+.+|.
T Consensus 233 --~d---------------------------~p~~~~------------------~~--------~-~~~lG~Gp----- 251 (356)
T PRK09864 233 --GD---------------------------VPGIDN------------------IK--------Y-PLKLGQGP----- 251 (356)
T ss_pred --CC---------------------------CCCCcc------------------cc--------c-ccccCCCC-----
Confidence 00 011000 00 0 00111110
Q ss_pred cCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccc
Q 011407 332 PDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRV 411 (486)
Q Consensus 332 P~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~ 411 (486)
-+ .+.+ . ....++.+.+.+.++.++ .+.+.+.
T Consensus 252 --------------------------------------~i--~~~D---~---~~i~~~~l~~~l~~~A~~-~~Ip~Q~- 283 (356)
T PRK09864 252 --------------------------------------GL--MLFD---K---RYFPNQKLVAALKSCAAH-NDLPLQF- 283 (356)
T ss_pred --------------------------------------eE--EEcc---C---CccCCHHHHHHHHHHHHH-cCCCceE-
Confidence 00 0000 0 112466677777777766 3665431
Q ss_pred cCCCcccchHHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 412 VPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 412 ~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
.....|+||++.++. ++|++...++.+. .|++.|.++++++..+++++..++.++
T Consensus 284 ~~~~~ggTDa~~i~~~~~Gvpt~~isiP~RY--------~Hs~~e~~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 284 STMKTGATDGGRYNVMGGGRPVVALCLPTRY--------LHANSGMISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred EEcCCCCchHHHHHHhCCCCcEEEEeeccCc--------CCCcceEeEHHHHHHHHHHHHHHHHhc
Confidence 123346899988754 4888877666654 999999999999999999999998775
No 73
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.28 E-value=2.1e-10 Score=116.00 Aligned_cols=311 Identities=14% Similarity=0.101 Sum_probs=167.1
Q ss_pred HHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC--CCCcEEEEEeccCcccCcCCCCCcccc-c
Q 011407 102 SVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT--GGPPFVALRADMDALPIQEAVEWEYKS-K 178 (486)
Q Consensus 102 ~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~--~~~~~ill~gH~DtVP~~~~~~~p~~~-~ 178 (486)
++|++|+++|++|+.|.++++++.++|++++.+++.+ .-.|+++.+++ +.+|+|+|.+|||+|+- =.+. .
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~D-~~GNvia~~~g~~~~~~~vml~AHmDeVGf------~V~~I~ 74 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVETD-GLGGIFGIKESQVENAPRVMVAAHMDEVGF------MVSQIK 74 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEecCCCCCCCEEEEEecccEeCE------EEEEEC
Confidence 6799999999999999999999999999999988764 46799998744 23589999999999972 1111 2
Q ss_pred CCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC-CcC--cHH--HHHHc----CCCccccEEEEEecCC
Q 011407 179 VAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE-AGN--GAK--RMMAD----GALEDVEAIFAVHVSH 249 (486)
Q Consensus 179 ~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE-~g~--G~~--~l~~~----g~~~~~d~~i~~~~~~ 249 (486)
.+|.++=.-. |+.. ..-+++.-..+++.+.+ ..+ |.. ++.+. ......+-.+ .+.+.
T Consensus 75 ~~G~l~~~~v-GG~~------------~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~-IDiGa 140 (350)
T TIGR03107 75 PDGTFRVVEL-GGWN------------PLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDIL-FDGGF 140 (350)
T ss_pred CCceEEEEeC-CCcc------------ccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEE-EEeCC
Confidence 3465543211 0000 00122222233333332 111 221 22211 0000111111 12211
Q ss_pred --CCCceeEEeccCcccceeeEEEE-----EEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEE
Q 011407 250 --EHPTGVIGSRPGPLLAGCGFFHA-----VISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYF 322 (486)
Q Consensus 250 --~~p~g~i~~~~G~~~ag~~~~~i-----~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i 322 (486)
.+..-..+++.|..-.-...+.. .+.|++- .-+=....+.+++..|.+.. ....++-+..+
T Consensus 141 ~skee~~~~GI~vGd~v~~~~~~~~~~~~~~i~~kal------DdR~g~a~l~e~l~~l~~~~------~~~~l~~~~tv 208 (350)
T TIGR03107 141 TNKDEAWSFGVRPGDVIVPQTETILTANGKNVISKAW------DNRYGVLMILELLESLKDQE------LPNTLIAGANV 208 (350)
T ss_pred CCHHHHHhcCCCCCCEEEECCCeEEEcCCCEEEEecc------ccHHHHHHHHHHHHHhhhcC------CCceEEEEEEC
Confidence 01111112222211000001111 1223321 11123344445554444221 11122222211
Q ss_pred e---c--C--ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHH
Q 011407 323 N---G--G--DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEH 395 (486)
Q Consensus 323 ~---g--G--~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~ 395 (486)
+ | | .+.+.++....+.+|+-...+..... . .+.|...-+...+ . ....+..+.+.
T Consensus 209 qEEvG~rGA~~aa~~i~pD~aI~vDv~~~~d~~~~~--~----------~~lg~Gp~i~~~D---~---~~i~~~~l~~~ 270 (350)
T TIGR03107 209 QEEVGLRGAHVSTTKFNPDIFFAVDCSPAGDIYGDQ--G----------GKLGEGTLLRFFD---P---GHIMLPRMKDF 270 (350)
T ss_pred hhhcCchhhhhHHhhCCCCEEEEEecCCcCCCCCCC--c----------cccCCCceEEEec---C---CCCCCHHHHHH
Confidence 1 1 1 24566777788888886543321110 0 1233334443332 1 22358899999
Q ss_pred HHHHHHHhcCCCcccccCCCcccchHHH--HHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHH
Q 011407 396 VKKVAIDLLGPMNYRVVPPMMGAEDFSF--YSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAE 472 (486)
Q Consensus 396 l~~a~~~~~G~~~~~~~~~~~g~tD~~~--~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~ 472 (486)
+.++.++ .+.+.. .....|+||.+. ++. ++|++...+|.. ..|++.|.++++++..+++++..++.
T Consensus 271 l~~~A~~-~~I~~Q--~~~~~gGtDa~~~~~~~~Gvpt~~i~ip~R--------y~Hs~~e~i~~~D~~~~~~Ll~~~i~ 339 (350)
T TIGR03107 271 LLTTAEE-AGIKYQ--YYVAKGGTDAGAAHLKNSGVPSTTIGVCAR--------YIHSHQTLYSIDDFLAAQAFLQAIVK 339 (350)
T ss_pred HHHHHHH-cCCCcE--EecCCCCchHHHHHHhCCCCcEEEEccCcc--------cccChhheeeHHHHHHHHHHHHHHHH
Confidence 9999998 588754 244557999994 443 589887655554 39999999999999999999999987
Q ss_pred HH
Q 011407 473 RF 474 (486)
Q Consensus 473 ~~ 474 (486)
++
T Consensus 340 ~l 341 (350)
T TIGR03107 340 KL 341 (350)
T ss_pred hc
Confidence 65
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.00 E-value=3.3e-05 Score=84.45 Aligned_cols=135 Identities=18% Similarity=0.308 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhhhC-CCCCC---ChHHHHHHHHHHHHhCCC---------ce--Eec-------------CCCceEEEEE
Q 011407 97 VDWLKSVRRTIHQN-PELAF---QEFETSRLLRAELDRMEI---------GY--KYP-------------LAKTGIRAWV 148 (486)
Q Consensus 97 ~~~l~~ll~~lv~i-Ps~s~---~E~~~a~~l~~~L~~~G~---------~v--~~~-------------~~~~nvia~~ 148 (486)
.++..+.+.+|.++ |.+.+ +|..+.+|+.+++.+..- ++ +.. .+-.|++.++
T Consensus 56 ~~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki 135 (834)
T KOG2194|consen 56 EARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKI 135 (834)
T ss_pred HHHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEec
Confidence 45555666666666 54443 455788888888876421 11 110 1246899998
Q ss_pred cCC--CCc-EEEEEeccCcccCcCCCCCcccccCCCeeeecCch-HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc
Q 011407 149 GTG--GPP-FVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD-AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG 224 (486)
Q Consensus 149 g~~--~~~-~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~-g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g 224 (486)
+++ ... .|++++|+|+||.+. |-|.| ..++.+|.++|.+.+....+..+|+|+|..+||.+
T Consensus 136 ~~k~~~~~~~lLlnaHfDSvpt~~---------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~ 200 (834)
T KOG2194|consen 136 SPKNGNDKNALLLNAHFDSVPTGP---------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESG 200 (834)
T ss_pred CCCCCCccceeeeeccccccCCCC---------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccch
Confidence 443 234 899999999999643 34444 56788999999999988888999999999999998
Q ss_pred C-cHHHHHHcCCC-ccccEEEEEe
Q 011407 225 N-GAKRMMADGAL-EDVEAIFAVH 246 (486)
Q Consensus 225 ~-G~~~l~~~g~~-~~~d~~i~~~ 246 (486)
- |+-.++.++.. +.+.+++.++
T Consensus 201 L~gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 201 LLGSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred hhhcccceecChhhhhhheEEecc
Confidence 5 77777775433 3566677554
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=97.87 E-value=2.5e-05 Score=71.75 Aligned_cols=82 Identities=24% Similarity=0.446 Sum_probs=59.8
Q ss_pred EEEEEeccCcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHH
Q 011407 155 FVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRM 230 (486)
Q Consensus 155 ~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l 230 (486)
.|++.+|+|+++ .... + -++.|++ .+++++|..|+.|++.+.+++++|+|+|..+||.|. |+..+
T Consensus 2 ~ivi~aH~Ds~~-~~~~---------~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDAD---------G-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcCC---------C-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 689999999997 2111 1 2455653 788899999999999777788999999999999997 99999
Q ss_pred HHc--CCCccccEEEEEec
Q 011407 231 MAD--GALEDVEAIFAVHV 247 (486)
Q Consensus 231 ~~~--g~~~~~d~~i~~~~ 247 (486)
++. ...+++.++|.++.
T Consensus 71 ~~~~~~~~~~~~~~inlD~ 89 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINLDM 89 (179)
T ss_dssp HHHHHCHHHHEEEEEEECS
T ss_pred HHhhhcccccceeEEeccc
Confidence 863 12235667776663
No 76
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=96.59 E-value=0.035 Score=53.45 Aligned_cols=127 Identities=16% Similarity=0.140 Sum_probs=87.5
Q ss_pred HHHHHHhcCcchHHHHHHHHHHhhhCCCC--CCChHHHHHHHHHHHHhCCCceEecC----------CCceEEEEEcCCC
Q 011407 85 KEVMELARRPETVDWLKSVRRTIHQNPEL--AFQEFETSRLLRAELDRMEIGYKYPL----------AKTGIRAWVGTGG 152 (486)
Q Consensus 85 ~~i~~~~~~~~~~~~l~~ll~~lv~iPs~--s~~E~~~a~~l~~~L~~~G~~v~~~~----------~~~nvia~~g~~~ 152 (486)
+.-+..++-+....++++.++-|. +|.+ |.+-.++.+||.+.|+.+|+.++.+. .-.|+++++....
T Consensus 38 ~~~lr~i~~~s~~~~~~~~L~p~l-v~Rvpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A 116 (338)
T KOG3946|consen 38 ESRLRAINPDSDWNRLWENLLPIL-VPRVPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNA 116 (338)
T ss_pred HHHHHHhcCCCCHHHHHHhhhhhh-ccccCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCc
Confidence 344444544666777887776653 3333 23457899999999999999987531 1358899986554
Q ss_pred CcEEEEEeccCcccCcCCCCCcccccCCCe-eeecCchHHHHHHHHHHHHHHhcC----CCCCceEEEEeecCCCC
Q 011407 153 PPFVALRADMDALPIQEAVEWEYKSKVAGK-MHACGHDAHVAMLIGAAKILKSRE----HLLKGTVILIFQPAEEA 223 (486)
Q Consensus 153 ~~~ill~gH~DtVP~~~~~~~p~~~~~dG~-l~GrG~~g~~a~~l~aa~~L~~~g----~~l~~~I~~~~~~dEE~ 223 (486)
...+.+.+|||.--... +. +-+-++.-++||++..+++|.+.- ......+.++|--+||.
T Consensus 117 ~r~lVlachydsk~~p~-----------~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEA 181 (338)
T KOG3946|consen 117 SRYLVLACHYDSKIFPG-----------GMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEA 181 (338)
T ss_pred chheeeecccccccCCC-----------cceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHH
Confidence 67899999999974321 22 223334478999999998887532 12446899999999996
No 77
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=95.58 E-value=0.04 Score=57.97 Aligned_cols=64 Identities=30% Similarity=0.380 Sum_probs=50.2
Q ss_pred CcEEEEEeccCcccCcCCCCCcccccCCCeeeecCc--h-HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHH
Q 011407 153 PPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGH--D-AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAK 228 (486)
Q Consensus 153 ~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~--~-g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~ 228 (486)
.+.+++.+|+|.+|. +-|+ + .+++++|.+++.|++.. ++.+|.|++...||.|- |+.
T Consensus 208 ~~~~~~~a~~~s~~~-----------------~~GA~DNasGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~ 268 (435)
T COG2234 208 DSLGLLGAHIDSVPT-----------------GPGADDNASGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSE 268 (435)
T ss_pred CceeeecccccCCcC-----------------CCCcccccHHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccH
Confidence 466777777777663 2333 2 67789999999999765 88999999999999996 999
Q ss_pred HHHHcCC
Q 011407 229 RMMADGA 235 (486)
Q Consensus 229 ~l~~~g~ 235 (486)
.+...-.
T Consensus 269 ~~~~~~~ 275 (435)
T COG2234 269 AYVKRLS 275 (435)
T ss_pred HHHhcCC
Confidence 9988643
No 78
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=95.36 E-value=0.042 Score=54.64 Aligned_cols=64 Identities=30% Similarity=0.362 Sum_probs=50.5
Q ss_pred CCCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEec
Q 011407 179 VAGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHV 247 (486)
Q Consensus 179 ~dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~ 247 (486)
.++++.|+.-| .++++++.+++.|++. .++.+|.|+|++.||.|. |+...... + ++|.+|+.+.
T Consensus 124 ~~~~i~gkalDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~--i-~PD~ai~vD~ 190 (292)
T PF05343_consen 124 GNGRIVGKALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFR--I-KPDIAIAVDV 190 (292)
T ss_dssp TTTEEEETTHHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHH--H--CSEEEEEEE
T ss_pred CCCEEEEEeCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeecccc--c-CCCEEEEEee
Confidence 34568888876 7888999999999975 455999999999999997 88877665 2 5899987764
No 79
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=94.93 E-value=0.068 Score=58.90 Aligned_cols=76 Identities=22% Similarity=0.315 Sum_probs=56.1
Q ss_pred ceEEEEE-cCC-CCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHH---HHhcCCCCCceEEEE
Q 011407 142 TGIRAWV-GTG-GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKI---LKSREHLLKGTVILI 216 (486)
Q Consensus 142 ~nvia~~-g~~-~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~---L~~~g~~l~~~I~~~ 216 (486)
.|+++.+ |+. +.+.|++.+|.|..-.|. ++ .+.+++.++..++. +++.|.+|.++|.|+
T Consensus 339 ~NIig~I~Gs~epD~~ViigahrDSw~~Ga-------------~d---p~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~ 402 (702)
T KOG2195|consen 339 QNIIGKIEGSEEPDRYVIIGAHRDSWTFGA-------------ID---PNSGTALLLEIARALSKLKKRGWRPRRTILFA 402 (702)
T ss_pred eeEEEEEecCcCCCeEEEEeccccccccCC-------------cC---CCccHHHHHHHHHHHHHHHHcCCCccceEEEE
Confidence 6899999 534 678999999999885321 00 01234555555544 456789999999999
Q ss_pred eecCCCCcC-cHHHHHHc
Q 011407 217 FQPAEEAGN-GAKRMMAD 233 (486)
Q Consensus 217 ~~~dEE~g~-G~~~l~~~ 233 (486)
.+.+||-|. |+-.++++
T Consensus 403 sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 403 SWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred EccchhccccccHHHHHH
Confidence 999999997 88887775
No 80
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=94.48 E-value=0.11 Score=52.97 Aligned_cols=64 Identities=27% Similarity=0.277 Sum_probs=51.3
Q ss_pred CeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCC
Q 011407 181 GKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSH 249 (486)
Q Consensus 181 G~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~ 249 (486)
+++.|+.-| .++++++.+++.+++. +++.+|.++|++.||.|. |++..... + ++|.+|++|.++
T Consensus 170 ~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~--i-~pD~aI~vDv~~ 236 (350)
T TIGR03107 170 KNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK--F-NPDIFFAVDCSP 236 (350)
T ss_pred CEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh--C-CCCEEEEEecCC
Confidence 467777766 7888999999999864 578999999999999996 88865554 3 589999998653
No 81
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=94.20 E-value=0.41 Score=48.93 Aligned_cols=112 Identities=17% Similarity=0.208 Sum_probs=72.5
Q ss_pred HHHHHHHhCCCceEecC---------CCceEEEEEcCC--------CCcEEEEEeccCcccCcCCCCCcccccCCCeeee
Q 011407 123 LLRAELDRMEIGYKYPL---------AKTGIRAWVGTG--------GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHA 185 (486)
Q Consensus 123 ~l~~~L~~~G~~v~~~~---------~~~nvia~~g~~--------~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~G 185 (486)
.+..-+..-|+.....+ --+|+.+++.+| .-|+|++.+||||..+-+ + +-
T Consensus 166 ~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~--ls 232 (555)
T KOG2526|consen 166 HLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------G--LS 232 (555)
T ss_pred HHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCC-----------C--CC
Confidence 34444445566654321 136888887421 239999999999997532 1 22
Q ss_pred cCch---HHHHHHHHHHHHHHhcC----CCCCceEEEEeecCCCCc-CcHHHHHHc---CCCccccEEEEEec
Q 011407 186 CGHD---AHVAMLIGAAKILKSRE----HLLKGTVILIFQPAEEAG-NGAKRMMAD---GALEDVEAIFAVHV 247 (486)
Q Consensus 186 rG~~---g~~a~~l~aa~~L~~~g----~~l~~~I~~~~~~dEE~g-~G~~~l~~~---g~~~~~d~~i~~~~ 247 (486)
.|+| .++.++|..++.+.+.- -..+.|+.|+.+.+---. .|+++.++- -+-+.+|+++|.+.
T Consensus 233 vgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLdt 305 (555)
T KOG2526|consen 233 VGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLDT 305 (555)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhhh
Confidence 3443 35568888888887643 245889999999876543 388887772 12236899998764
No 82
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=93.32 E-value=0.48 Score=45.45 Aligned_cols=66 Identities=24% Similarity=0.372 Sum_probs=50.8
Q ss_pred cEEEEEeccCcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhc---CCCCCceEEEEeecCCCCcC-c
Q 011407 154 PFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSR---EHLLKGTVILIFQPAEEAGN-G 226 (486)
Q Consensus 154 ~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~---g~~l~~~I~~~~~~dEE~g~-G 226 (486)
|.|++.+.||+.-. .++. +.|++ .++.++|+++++|.+. ...++++|.|.|-.+|--|- |
T Consensus 1 ~iIlv~armDs~s~-----------F~~~--s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiG 67 (234)
T PF05450_consen 1 PIILVVARMDSFSF-----------FHDL--SPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIG 67 (234)
T ss_pred CEEEEEecccchhc-----------ccCC--CCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccc
Confidence 67999999999852 1122 35554 6777899999999865 23578999999999999997 8
Q ss_pred HHHHHH
Q 011407 227 AKRMMA 232 (486)
Q Consensus 227 ~~~l~~ 232 (486)
.+.|+.
T Consensus 68 S~R~vy 73 (234)
T PF05450_consen 68 SSRFVY 73 (234)
T ss_pred hHHHHH
Confidence 888754
No 83
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=89.99 E-value=9.7 Score=40.47 Aligned_cols=125 Identities=13% Similarity=0.101 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-------CCceEEEEE-cCCCCcEEEEEeccCcccC
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------AKTGIRAWV-GTGGPPFVALRADMDALPI 167 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~~~nvia~~-g~~~~~~ill~gH~DtVP~ 167 (486)
...+-+.+.|+|++-|.--..-...++++.+.+++.|++++..+ +-+.+++.= |+...|.++..-+...-+.
T Consensus 152 ~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~~ 231 (468)
T cd00433 152 AIAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGAS 231 (468)
T ss_pred HHHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCCC
Confidence 56788899999999998767778899999999999999988642 223444432 3334566666665543221
Q ss_pred cC-----CCCCcccc----cCC-CeeeecCch-HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 168 QE-----AVEWEYKS----KVA-GKMHACGHD-AHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 168 ~~-----~~~~p~~~----~~d-G~l~GrG~~-g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
.. ..+..|++ .+. .-|.+--.| ++.|+.+++++++.+.+ ++.||..++..-|=
T Consensus 232 ~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~--~~vnV~~i~~~~EN 295 (468)
T cd00433 232 KKPIALVGKGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELK--LPVNVVGVLPLAEN 295 (468)
T ss_pred CCcEEEEcCceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 10 01334443 121 122222223 78889999999999864 68899988877664
No 84
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=89.80 E-value=7.3 Score=41.46 Aligned_cols=123 Identities=12% Similarity=0.078 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-------CCceEEEEE-cCCCCcEEEEEeccC----
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------AKTGIRAWV-GTGGPPFVALRADMD---- 163 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~~~nvia~~-g~~~~~~ill~gH~D---- 163 (486)
...+-+.+.|+|++.|.--..-...++++.+.+++.|++++..+ +-..+++.= |+...|.++..-+.-
T Consensus 169 ~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y~g~~~~ 248 (483)
T PRK00913 169 AIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGKKP 248 (483)
T ss_pred HHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEECCCCCe
Confidence 56778899999999998666777889999999999999987532 223444432 333346666655541
Q ss_pred cccCcCCCCCcccc----cC-CCeeee-cCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 164 ALPIQEAVEWEYKS----KV-AGKMHA-CGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 164 tVP~~~~~~~p~~~----~~-dG~l~G-rG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
.+-+|. +..|++ .+ ...|++ ++.-++.|+.+++++++.+. ++|.||..+....|=
T Consensus 249 i~LVGK--GITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~l--kl~vnV~~v~~l~EN 309 (483)
T PRK00913 249 IALVGK--GLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAEL--KLPVNVVGVVAACEN 309 (483)
T ss_pred EEEEcC--ceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 111222 334443 12 112322 32228888999999999986 468999988877764
No 85
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=87.67 E-value=0.43 Score=47.42 Aligned_cols=69 Identities=20% Similarity=0.188 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHH
Q 011407 388 NDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGA 464 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~ 464 (486)
.+..+.+.+.++.++ .+.+.+.. ....++||.+.++. .+|+....++... .|++.|.++++++...+
T Consensus 221 ~~~~l~~~l~~~A~~-~~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~ry--------~Hs~~e~~~~~Di~~~~ 290 (292)
T PF05343_consen 221 PNPKLVDKLREIAEE-NGIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCRY--------MHSPVEVIDLDDIEATI 290 (292)
T ss_dssp SHHHHHHHHHHHHHH-TT--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEBS--------TTSTTEEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-cCCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEeccccc--------CCCcceEEEHHHHHHHh
Confidence 578899999999998 48865432 56788999998875 4788776666654 99999999999999887
Q ss_pred HH
Q 011407 465 AV 466 (486)
Q Consensus 465 ~i 466 (486)
++
T Consensus 291 ~L 292 (292)
T PF05343_consen 291 DL 292 (292)
T ss_dssp HH
T ss_pred hC
Confidence 64
No 86
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=86.41 E-value=24 Score=38.05 Aligned_cols=122 Identities=12% Similarity=0.049 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceE-ecC-------CCceEEEEE-cCCCCcEEEEEeccCccc
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYK-YPL-------AKTGIRAWV-GTGGPPFVALRADMDALP 166 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~-~~~-------~~~nvia~~-g~~~~~~ill~gH~DtVP 166 (486)
...+.+.+.|+|++-|.--..-...++++.+.+.+.|++++ ..+ +-..+++.= |+...|.++..-|. |
T Consensus 210 ~ia~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y~---g 286 (569)
T PTZ00412 210 IIGHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEYI---G 286 (569)
T ss_pred HHHHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEeC---C
Confidence 56778899999999997666667788899988888999986 421 223444442 33334655555443 1
Q ss_pred CcCC--------CCCcccc----cCC-Ceee-ecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 167 IQEA--------VEWEYKS----KVA-GKMH-ACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 167 ~~~~--------~~~p~~~----~~d-G~l~-GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
.++. .+..|++ .+. +.|. .++.-++.|+.+++++++.+. ++|.||..++...|=
T Consensus 287 ~~~~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~L--klpvnVv~iiplaEN 354 (569)
T PTZ00412 287 NPRSSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKL--QLPVNVVAAVGLAEN 354 (569)
T ss_pred CCCCCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHc--CCCeEEEEEEEhhhc
Confidence 1110 1233442 111 1122 232227888999999999976 577899988877764
No 87
>PRK05015 aminopeptidase B; Provisional
Probab=81.69 E-value=40 Score=35.18 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=70.2
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC---CCceEecC------CC-ceEEEEE-cCCCCcEEEEEeccCcc
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM---EIGYKYPL------AK-TGIRAWV-GTGGPPFVALRADMDAL 165 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~---G~~v~~~~------~~-~nvia~~-g~~~~~~ill~gH~DtV 165 (486)
+-+...+.|+|++-|.--..-...++...+++++. +++++..+ .+ ..+++.= |+...|.++..-+-
T Consensus 99 ~~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~lv~L~Y~--- 175 (424)
T PRK05015 99 RLKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVLLALDYN--- 175 (424)
T ss_pred HHHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEEEEEEec---
Confidence 33568889999999976666667788888888776 46666432 13 3344432 23233444443332
Q ss_pred cCcCC----------CCCcccc----cC-CCeeee-cCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCC
Q 011407 166 PIQEA----------VEWEYKS----KV-AGKMHA-CGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEA 223 (486)
Q Consensus 166 P~~~~----------~~~p~~~----~~-dG~l~G-rG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~ 223 (486)
|.++. .+..|++ .+ .+-|.+ +..-++.|+.+++++++.+. .++.+|..++...|=.
T Consensus 176 ~~g~~~~~v~~aLVGKGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~--~l~~nV~~il~~aENm 247 (424)
T PRK05015 176 PTGDPDAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITR--GLNKRVKLFLCCAENL 247 (424)
T ss_pred CCCCCCCCeeEEEecCceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhc--CCCceEEEEEEecccC
Confidence 22211 1223332 11 111221 22227778888888887775 4788999988887753
No 88
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=78.07 E-value=23 Score=37.59 Aligned_cols=128 Identities=11% Similarity=0.005 Sum_probs=84.9
Q ss_pred chHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC------CCceEEEEE--cCCCCcEEEEEeccCccc
Q 011407 95 ETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL------AKTGIRAWV--GTGGPPFVALRADMDALP 166 (486)
Q Consensus 95 ~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~------~~~nvia~~--g~~~~~~ill~gH~DtVP 166 (486)
..+.+-..+.|+|..-|.--..-...++++.++|...|+.++... ..-|.+... ++...|.++...|.++=|
T Consensus 186 ~~~~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~ 265 (513)
T KOG2597|consen 186 LFKAAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSG 265 (513)
T ss_pred HHHHHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCC
Confidence 356777888999998887666778999999999999998776432 133433333 233457888888887765
Q ss_pred CcCC-----CCCcccc----cC-CCeeee-cCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc
Q 011407 167 IQEA-----VEWEYKS----KV-AGKMHA-CGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG 224 (486)
Q Consensus 167 ~~~~-----~~~p~~~----~~-dG~l~G-rG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g 224 (486)
.... .+..|++ .+ .+.|.+ |+..++.|+.+++++++.+.+ +|.|+.+++.--|=.-
T Consensus 266 ~~~~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcENm~ 332 (513)
T KOG2597|consen 266 ADKTILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCENMP 332 (513)
T ss_pred CcceEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeeccCC
Confidence 3221 2344543 12 122322 444478888999999998754 5688888887666543
No 89
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=77.11 E-value=7.1 Score=41.47 Aligned_cols=79 Identities=11% Similarity=-0.089 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHhcCCCccc--ccCCCcccchHHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHH
Q 011407 388 NDEDMYEHVKKVAIDLLGPMNYR--VVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 462 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~G~~~~~--~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~ 462 (486)
.|......+++++++ .|.+.+. .....++|+|.+.+.. ++|++- +|+..- ..|++-|.+..+++..
T Consensus 373 td~~~~a~i~~la~~-~~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvD--iGiP~l------~MHS~rE~~~~~D~~~ 443 (465)
T PTZ00371 373 TNGVTASLLKAIAKK-ANIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVD--IGIPQL------AMHSIREMCGVVDIYY 443 (465)
T ss_pred cCHHHHHHHHHHHHH-cCCCEEEEEecCCCCCcchHHHHHHhCCCCcEEE--echhhc------ccccHHHHccHHHHHH
Confidence 478899999999988 4776432 2234566899988754 366654 566543 4999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011407 463 GAAVHATIAERFL 475 (486)
Q Consensus 463 ~~~i~~~~i~~~l 475 (486)
.++++..++..|.
T Consensus 444 ~~~l~~af~~~~~ 456 (465)
T PTZ00371 444 LVKLIKAFFTNYS 456 (465)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999887543
No 90
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=75.64 E-value=5.8 Score=39.64 Aligned_cols=110 Identities=14% Similarity=0.148 Sum_probs=69.2
Q ss_pred HHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-------C-------------Cce-EEEEE-cCC--CCcEE
Q 011407 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------A-------------KTG-IRAWV-GTG--GPPFV 156 (486)
Q Consensus 101 ~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~-------------~~n-via~~-g~~--~~~~i 156 (486)
+.+.|+|++.|.---.-...++++.+.+++.|++++..+ + .+. ++.+| +++ ..++|
T Consensus 1 vn~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i 80 (311)
T PF00883_consen 1 VNLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPI 80 (311)
T ss_dssp HHHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEE
T ss_pred ChHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccE
Confidence 357899999998777888999999999999999887521 0 122 33345 322 23556
Q ss_pred EEEeccCcccCcCCCCCcccc----cC-CCeeee-cCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 157 ALRADMDALPIQEAVEWEYKS----KV-AGKMHA-CGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 157 ll~gH~DtVP~~~~~~~p~~~----~~-dG~l~G-rG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
+|.|- +..|+. .+ .+.|.+ ++.-++.|+.+++++++.+.+ +|.||..++...|=
T Consensus 81 ~LVGK----------GiTFDtGG~~lKp~~~M~~Mk~DM~GAAaV~ga~~aia~lk--~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 81 ALVGK----------GITFDTGGLSLKPSGGMEGMKYDMGGAAAVLGAMRAIAKLK--LPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEE----------EEEEEE-TTSSSCSTTGGGGGGGGHHHHHHHHHHHHHHHCT---SSEEEEEEEEEEE
T ss_pred EEEcc----------eEEEecCCccCCCCcchhhcccCcchHHHHHHHHHHHHHcC--CCceEEEEEEcccc
Confidence 66542 223332 11 123332 322378889999999999864 67888887776653
No 91
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=73.02 E-value=63 Score=34.47 Aligned_cols=122 Identities=15% Similarity=0.134 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCC-CceEecC-------CCceEEEEE-cCCCCcEEEEE---eccC
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRME-IGYKYPL-------AKTGIRAWV-GTGGPPFVALR---ADMD 163 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G-~~v~~~~-------~~~nvia~~-g~~~~~~ill~---gH~D 163 (486)
..-+.+.+.|+|++.|.---.-...++. ++.|.+.+ ++++..+ +-..+++.= |+...|.++.. |+-+
T Consensus 165 ai~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl~y~g~~~ 243 (485)
T COG0260 165 AIAEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVLEYNGKGK 243 (485)
T ss_pred HHHHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEEEcCCCCC
Confidence 5667889999999999766666677777 77777776 7776532 223344432 23234554432 2221
Q ss_pred -ccc---CcCCCCCcccc----cCCC-eeee-cCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 164 -ALP---IQEAVEWEYKS----KVAG-KMHA-CGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 164 -tVP---~~~~~~~p~~~----~~dG-~l~G-rG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
-.| +| .+..|++ .+.+ -|.. +..-|+.|+.++++.++.+. ++|.||+.+...-|=
T Consensus 244 ~~~~iaLVG--KGitFDsGGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l--~l~vnv~~vl~~~EN 308 (485)
T COG0260 244 AKKPIALVG--KGITFDSGGISIKPAAGMDTMKYDMGGAAAVLGAMRALAEL--KLPVNVVGVLPAVEN 308 (485)
T ss_pred CCceEEEEc--CceeecCCCcccCCccchhhhhcccchHHHHHHHHHHHHHc--CCCceEEEEEeeecc
Confidence 122 12 2344443 2211 1221 22227788899999999986 477899988777664
No 92
>PRK02813 putative aminopeptidase 2; Provisional
Probab=70.57 E-value=9.4 Score=40.12 Aligned_cols=75 Identities=9% Similarity=-0.075 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHHHHhcCCCccc--ccCCCcccchHHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHH
Q 011407 388 NDEDMYEHVKKVAIDLLGPMNYR--VVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 462 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~G~~~~~--~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~ 462 (486)
.|......+++++++. +.+.+. .....++|+|.+.+.. ++|++- +|...- ..|++-|.++.+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvd--iGiP~l------~MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVD--VGAPML------AMHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEE--eChhhc------ccccHHHHccHHHHHH
Confidence 4778888888888884 775432 1223357999998764 366654 566543 4999999999999999
Q ss_pred HHHHHHHHH
Q 011407 463 GAAVHATIA 471 (486)
Q Consensus 463 ~~~i~~~~i 471 (486)
.++++..++
T Consensus 417 ~~~l~~~f~ 425 (428)
T PRK02813 417 LIKALTAFF 425 (428)
T ss_pred HHHHHHHHh
Confidence 999988775
No 93
>PRK02256 putative aminopeptidase 1; Provisional
Probab=62.86 E-value=14 Score=39.17 Aligned_cols=76 Identities=11% Similarity=0.028 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccC----CCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHH
Q 011407 388 NDEDMYEHVKKVAIDLLGPMNYRVVP----PMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 462 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~G~~~~~~~~----~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~ 462 (486)
.+..++..+++++++ .+.+-+.... ...|+||.-.+++ ++|++. +|...- .+|++-|.++.+++..
T Consensus 380 ~~~~~~~~i~~iA~~-~~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvd--iGiP~l------~MHS~rE~~~~~D~~~ 450 (462)
T PRK02256 380 ANAEFVAEVRNLFNK-NNVVWQTAELGKVDQGGGGTIAKFLANYGMEVID--CGVALL------SMHSPFEIASKADIYE 450 (462)
T ss_pred CCHHHHHHHHHHHHH-cCCCEEEEEeecCCCCCcChHHHHHcCCCCcEEE--echhhh------ccccHHHHhhHHHHHH
Confidence 477888889998888 4775432111 2357888545553 367654 565543 3999999999999999
Q ss_pred HHHHHHHHHH
Q 011407 463 GAAVHATIAE 472 (486)
Q Consensus 463 ~~~i~~~~i~ 472 (486)
.++++..++.
T Consensus 451 ~~~ll~~f~~ 460 (462)
T PRK02256 451 TYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 94
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=61.18 E-value=82 Score=34.04 Aligned_cols=89 Identities=13% Similarity=0.249 Sum_probs=57.9
Q ss_pred HHHHHHHhCCCceEecC---------CCceEEEEEc--CC-CCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCchH
Q 011407 123 LLRAELDRMEIGYKYPL---------AKTGIRAWVG--TG-GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDA 190 (486)
Q Consensus 123 ~l~~~L~~~G~~v~~~~---------~~~nvia~~g--~~-~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g 190 (486)
++...+++.|.+++... .+.|+++.+. .+ +...+++ +||-+..+ |- .++
T Consensus 93 ~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl-----~vP~~~~~-------------~~-~~~ 153 (617)
T KOG3566|consen 93 WAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVL-----VVPYGRSS-------------GS-NSA 153 (617)
T ss_pred HHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEE-----EEecccCC-------------Cc-chh
Confidence 46777777798876432 2689999883 22 3467888 77732210 01 135
Q ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcCcHHHHHHc
Q 011407 191 HVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMAD 233 (486)
Q Consensus 191 ~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~G~~~l~~~ 233 (486)
.++.+++.++.+++- .-+.+||+++|+-++- -|.+..+++
T Consensus 154 ~v~l~lsla~~f~r~-~yWsKDII~v~~d~~~--~g~~AwLea 193 (617)
T KOG3566|consen 154 SVALLLSLADYFSRW-VYWSKDIIFVFTDGPA--LGLDAWLEA 193 (617)
T ss_pred HHHHHHHHHHHhcCC-eeecccEEEEEeCCcc--ccHHHHHHH
Confidence 667777777777764 3589999999997722 267777776
No 95
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=49.15 E-value=89 Score=24.61 Aligned_cols=60 Identities=13% Similarity=0.090 Sum_probs=40.8
Q ss_pred eEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHH
Q 011407 334 AVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKK 398 (486)
Q Consensus 334 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~ 398 (486)
..+..+-+|.+++.+..++.++|.+-++-. +-.+.+.+..+..+.+.+. .|..+-.++.+
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLkl~----~e~i~LsYkde~s~~~v~l-~d~dle~aws~ 67 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLELP----AEHITLSYKSEASGEDVIL-SDTNMEDVWSQ 67 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhCCC----chhcEEEeccCCCCCccCc-ChHHHHHHHHh
Confidence 456688999999999999999998887642 2345666655444455555 56555554443
No 96
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=47.15 E-value=42 Score=34.10 Aligned_cols=63 Identities=24% Similarity=0.123 Sum_probs=38.7
Q ss_pred ceEEEEEcCCCCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCC
Q 011407 142 TGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAE 221 (486)
Q Consensus 142 ~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dE 221 (486)
.|+|+.-++ .++++++.+|.|.=..|..+ + ..++++.+.++..|...+. .+.++.-+.|
T Consensus 179 y~~Ia~~~~-en~vv~i~AH~DHW~~G~tD---------N-------~lg~~~AV~~~~~lr~~~~----~~~lv~FtAE 237 (486)
T COG4882 179 YNVIAVDGG-ENGVVLIGAHLDHWYTGFTD---------N-------ILGVAQAVETAGRLRGRGL----AAGLVVFTAE 237 (486)
T ss_pred EEEEEecCC-CCCceEEeechhhhhhcccc---------h-------hhhHHHHHHHHHHHhhcCc----ceeEEEEecc
Confidence 456654333 36799999999988754311 1 1455666667777776553 4455555677
Q ss_pred CCcC
Q 011407 222 EAGN 225 (486)
Q Consensus 222 E~g~ 225 (486)
|.|+
T Consensus 238 E~g~ 241 (486)
T COG4882 238 EHGM 241 (486)
T ss_pred ccCC
Confidence 7764
No 97
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=39.80 E-value=3.4e+02 Score=26.27 Aligned_cols=87 Identities=18% Similarity=0.376 Sum_probs=54.7
Q ss_pred CCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHH--HHhcCCCCCceEEEEee--cCCCC----
Q 011407 152 GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKI--LKSREHLLKGTVILIFQ--PAEEA---- 223 (486)
Q Consensus 152 ~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~--L~~~g~~l~~~I~~~~~--~dEE~---- 223 (486)
..|++.+.|-+--+-+.+ .+-|.+ ...||.++++-.|++. +++.|..|++++++.-- ++--.
T Consensus 30 ~aptlGIiGRLGgigARP--------~~iGlV--SDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~ 99 (276)
T PF06675_consen 30 SAPTLGIIGRLGGIGARP--------ERIGLV--SDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHD 99 (276)
T ss_pred CCCeeEEEeecccccccc--------cceeee--ecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCC
Confidence 358999988887775422 111221 2234666666666654 44678899999998743 22211
Q ss_pred -----cC--cHHHHHHcCCCccccEEEEEecC
Q 011407 224 -----GN--GAKRMMADGALEDVEAIFAVHVS 248 (486)
Q Consensus 224 -----g~--G~~~l~~~g~~~~~d~~i~~~~~ 248 (486)
++ +...|.+.......|+++..+.+
T Consensus 100 PvpFM~sPv~~~~~n~~EV~p~mdAILSiDTT 131 (276)
T PF06675_consen 100 PVPFMGSPVDMATMNRHEVDPEMDAILSIDTT 131 (276)
T ss_pred CcccccCccCHHHHHHhhcCcccceEEEEecC
Confidence 23 66677776666678999987754
No 98
>PRK02256 putative aminopeptidase 1; Provisional
Probab=36.06 E-value=55 Score=34.81 Aligned_cols=41 Identities=24% Similarity=0.279 Sum_probs=26.7
Q ss_pred CeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC
Q 011407 181 GKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN 225 (486)
Q Consensus 181 G~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~ 225 (486)
+.+.|.+-| ..+.+++.+ |.+.. .++..++++++..||.|+
T Consensus 252 efI~s~rLDNr~~~~~~lea---l~~~~-~~~~~~~~~~~dqEEVGs 294 (462)
T PRK02256 252 SLIGAYGQDDRVCAYTSLEA---LLELE-NPEKTAVVLLVDKEEIGS 294 (462)
T ss_pred ceeeccccccHHHHHHHHHH---HHhcc-cCCCeEEEEEEcccccCC
Confidence 466666665 334444444 44332 456799999999999996
No 99
>PRK06156 hypothetical protein; Provisional
Probab=35.04 E-value=2.2e+02 Score=30.75 Aligned_cols=25 Identities=20% Similarity=0.329 Sum_probs=20.9
Q ss_pred EEEEEEEecCccCccccCeEEEEEE
Q 011407 316 VVSVTYFNGGDHLDMIPDAVVIGGT 340 (486)
Q Consensus 316 ~~~v~~i~gG~~~nvIP~~a~~~~d 340 (486)
..++..++||...|+||+.|.+.+.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEEe
Confidence 3567788999999999999998843
No 100
>KOG3430 consensus Dynein light chain type 1 [Cytoskeleton]
Probab=35.00 E-value=75 Score=25.47 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=29.0
Q ss_pred cchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC
Q 011407 94 PETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM 131 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~ 131 (486)
++++++.+++.++..+--+. .+.++|.+|++.|.+.
T Consensus 15 ~~mq~~a~~~a~~al~~f~~--~~k~iA~~iKkefDkk 50 (90)
T KOG3430|consen 15 EEMQQEAIELARQALEKFNV--IEKDIAAFIKKEFDKK 50 (90)
T ss_pred hHHHHHHHHHHHHHHHHcCC--ChHHHHHHHHHHHhhh
Confidence 55677888888887766654 8899999999999974
No 101
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=31.40 E-value=72 Score=25.39 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=23.4
Q ss_pred chHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC
Q 011407 95 ETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM 131 (486)
Q Consensus 95 ~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~ 131 (486)
+++++++++.++.++.- .+|.++|++|++.|++.
T Consensus 16 ~~~~~~~~~~~~a~~~~---~~~~eiA~~iK~~lD~~ 49 (89)
T PF01221_consen 16 EMQEEAIELAKEALKKY---QDEKEIAEFIKQELDKK 49 (89)
T ss_dssp HHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHC---CcHHHHHHHHHHHHhcc
Confidence 34555555555555422 26788999999999986
No 102
>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA. NoxA is essential for growth control of the fungal endophyte in plant tissue in the process of symbiotic interaction between a fungi and its plant host. The Epichloe festucae p67(phox)-like regulator, NoxR, dispensable in culture but essential in plants for the symbiotic interaction. Plants infected with a noxR deletion mutant show severe stunting and premature senescence, whereas hyphae in the meristematic tissues show increased branching leading to increased fungal colonization of pseudostem and leaf blade tissue. The PB1 domain is a modular domain mediating specific protein-protein interactions which a play role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is
Probab=28.58 E-value=2.9e+02 Score=22.12 Aligned_cols=55 Identities=9% Similarity=0.075 Sum_probs=37.3
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHH
Q 011407 339 GTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVA 400 (486)
Q Consensus 339 ~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~ 400 (486)
..+|.+|....+++.++|++.+.- .-.+++.+..+ +.+.....+..+-.++..+-
T Consensus 14 ~~i~v~~~i~f~dL~~kIrdkf~~-----~~~~~iKykDE--GD~iti~sq~DLd~Ai~~a~ 68 (86)
T cd06408 14 RYIMIGPDTGFADFEDKIRDKFGF-----KRRLKIKMKDD--GDMITMGDQDDLDMAIDTAR 68 (86)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhCC-----CCceEEEEEcC--CCCccccCHHHHHHHHHHHH
Confidence 457889999999999999999863 34678888764 34444444555555444443
No 103
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=25.52 E-value=39 Score=30.31 Aligned_cols=34 Identities=12% Similarity=-0.024 Sum_probs=27.3
Q ss_pred HhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC
Q 011407 106 TIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL 139 (486)
Q Consensus 106 ~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~ 139 (486)
.|+..-+--|+-.++|++|+..|++.|.+|...+
T Consensus 3 ~LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~d 36 (175)
T COG4635 3 TLILYSTRDGQTRKIAEYIASHLRESGIQVDIQD 36 (175)
T ss_pred eEEEEecCCCcHHHHHHHHHHHhhhcCCeeeeee
Confidence 3445555568889999999999999999998654
No 104
>COG1152 CdhA CO dehydrogenase/acetyl-CoA synthase alpha subunit [Energy production and conversion]
Probab=25.42 E-value=2.9e+02 Score=30.13 Aligned_cols=81 Identities=16% Similarity=0.259 Sum_probs=49.1
Q ss_pred chhhHHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEe---------cCCCc-eEEEEEc
Q 011407 80 SRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKY---------PLAKT-GIRAWVG 149 (486)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~---------~~~~~-nvia~~g 149 (486)
+-..+++.++|+ ++++.+++..+|.=.+-+...++.-..-+..+..+|.++.. ..+.+ .=+..+|
T Consensus 154 tlgdle~~l~y~-----Eeqlt~~ls~~h~gqE~~~~dyeSkAlhaG~~d~l~~EiaDiaqi~a~~~pk~e~~aPliE~G 228 (772)
T COG1152 154 TLGDLEAALEYA-----EEQLTQLLSAVHTGQEGSLLDYESKALHAGMIDHLGMEIADIAQIVAYDFPKGEPDAPLIEIG 228 (772)
T ss_pred chHHHHHHHHHH-----HHHHHHHHHHHhccCcccccchhHHHhhhhhhhHHHHHHHHHHHHHhhcCCCCCCCCceEeec
Confidence 344577889898 78999999999887766655544444444445555544321 01111 2233454
Q ss_pred CC----CCcEEEEEeccCccc
Q 011407 150 TG----GPPFVALRADMDALP 166 (486)
Q Consensus 150 ~~----~~~~ill~gH~DtVP 166 (486)
.+ +.|+|++.||. ++|
T Consensus 229 ~g~idksKP~il~iGHn-v~~ 248 (772)
T COG1152 229 MGTIDKSKPTILVIGHN-VAP 248 (772)
T ss_pred CCccCCCCceEEEeccc-ccc
Confidence 33 36999999996 444
No 105
>PF12685 SpoIIIAH: SpoIIIAH-like protein; InterPro: IPR024232 Stage III sporulation protein AH (SpoIIIAH) is a protein that is involved in forespore engulfment. It forms a channel with SpoIIIAH that is open on the forespore end and closed (or gated) on the mother cell end. This allows sigma-E-directed gene expression in the mother-cell compartment of the sporangium to trigger the activation of sigma-G forespore-specific gene expression by a pathway of intercellular signaling. This family of proteins is found in bacteria, archaea and eukaryotes and so must have a wider function than in sporulation. Proteins in this family are typically between 174 and 223 amino acids in length.; PDB: 3UZ0_A 3TUF_A.
Probab=23.99 E-value=1.3e+02 Score=27.94 Aligned_cols=42 Identities=12% Similarity=0.026 Sum_probs=30.7
Q ss_pred CcchHHHHHHHHHHhhhCCCCCCChHH--------------HHHHHHHHHHhCCCc
Q 011407 93 RPETVDWLKSVRRTIHQNPELAFQEFE--------------TSRLLRAELDRMEIG 134 (486)
Q Consensus 93 ~~~~~~~l~~ll~~lv~iPs~s~~E~~--------------~a~~l~~~L~~~G~~ 134 (486)
|+..+.+.++.|+.+++.+..+.++.. .-..|...|+..||+
T Consensus 95 Re~~r~~~~e~L~~ii~~~~~s~~~k~~A~~~~~~l~~~~~kE~~iE~llkakGf~ 150 (196)
T PF12685_consen 95 REQSRSKQIETLKEIINNENASEEEKKEAQDKLLELTEKMEKEMEIENLLKAKGFE 150 (196)
T ss_dssp HHHHHHHHHHHHHHHHT-TTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-S
T ss_pred HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 578899999999999999998876532 334677778888886
No 106
>PF15643 Tox-PL-2: Papain fold toxin 2
Probab=23.71 E-value=1.5e+02 Score=24.36 Aligned_cols=35 Identities=23% Similarity=0.177 Sum_probs=24.9
Q ss_pred HHHHHHHhh-hCCCCCCChHHHHHHHHHHHHhCCCceE
Q 011407 100 LKSVRRTIH-QNPELAFQEFETSRLLRAELDRMEIGYK 136 (486)
Q Consensus 100 l~~ll~~lv-~iPs~s~~E~~~a~~l~~~L~~~G~~v~ 136 (486)
+.+...++. +++ -.++.++|..|+++|++.|++-.
T Consensus 5 ~~Q~I~~I~~~f~--~~qC~~cA~Al~~~L~~~gI~Gk 40 (100)
T PF15643_consen 5 VRQQIGKIASRFK--IFQCVECASALKQFLKQAGIPGK 40 (100)
T ss_pred HHHHHHHhhcccC--ceehHHHHHHHHHHHHHCCCCce
Confidence 334444444 332 36889999999999999998754
No 107
>PTZ00059 dynein light chain; Provisional
Probab=23.47 E-value=1.3e+02 Score=24.02 Aligned_cols=33 Identities=9% Similarity=0.054 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM 131 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~ 131 (486)
++++++++...++...+ .|.++|++|++.|++.
T Consensus 18 mq~~a~~~~~~Al~~~~---~~kdiA~~IK~~fD~~ 50 (90)
T PTZ00059 18 MQQDAIDCANQALEKFN---IEKDIAAYIKKEFDKK 50 (90)
T ss_pred HHHHHHHHHHHHHHHcC---chHHHHHHHHHHHHhh
Confidence 34444444444444332 3688999999999976
No 108
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=22.70 E-value=2.3e+02 Score=30.49 Aligned_cols=72 Identities=17% Similarity=0.306 Sum_probs=48.1
Q ss_pred CceEEEEEc--CC-CCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 011407 141 KTGIRAWVG--TG-GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIF 217 (486)
Q Consensus 141 ~~nvia~~g--~~-~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~ 217 (486)
+.|++|.+. .+ +...+++...++..- +.. ..++++..++.++.+++.. -+.+||+|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~--------------~~~----n~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSD--------------GEY----NAGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCC--------------ccc----chhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 579999873 22 246788855444331 110 1256788889999999764 4799999999
Q ss_pred ecCCCCcCcHHHHHHc
Q 011407 218 QPAEEAGNGAKRMMAD 233 (486)
Q Consensus 218 ~~dEE~g~G~~~l~~~ 233 (486)
+.+|. .|.+..+++
T Consensus 64 ~~~~~--~g~~awl~~ 77 (504)
T PF04114_consen 64 TDDEL--AGMQAWLEA 77 (504)
T ss_pred cCCcc--hHHHHHHHH
Confidence 87653 367777765
No 109
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=20.57 E-value=1.7e+02 Score=31.23 Aligned_cols=46 Identities=11% Similarity=-0.026 Sum_probs=24.9
Q ss_pred CCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEe-ecCCCCcC
Q 011407 180 AGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIF-QPAEEAGN 225 (486)
Q Consensus 180 dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~-~~dEE~g~ 225 (486)
++.+.|.+-| ..+.+.+.|+..++..-.+.+.++.+++ ...||.|+
T Consensus 242 ~e~i~s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs 290 (465)
T PTZ00371 242 EEFISSPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGS 290 (465)
T ss_pred CCeEEEecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCC
Confidence 4577777776 3334444444333211002344555555 99999996
No 110
>PLN03058 dynein light chain type 1 family protein; Provisional
Probab=20.32 E-value=1.7e+02 Score=25.20 Aligned_cols=36 Identities=17% Similarity=0.066 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM 131 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~ 131 (486)
++.++++....++...+...+|.++|.+|+++|.+.
T Consensus 47 mQ~~ave~a~~Al~k~~~~~~ekdIA~~IKk~fDkk 82 (128)
T PLN03058 47 LQNRAFSCARDILDAMPGKLDSKRLALALKKEFDSA 82 (128)
T ss_pred HHHHHHHHHHHHHHHccccCCHHHHHHHHHHHHhhh
Confidence 445555555655543332346688999999999975
No 111
>PRK02813 putative aminopeptidase 2; Provisional
Probab=20.28 E-value=1.4e+02 Score=31.39 Aligned_cols=42 Identities=17% Similarity=0.075 Sum_probs=26.3
Q ss_pred CeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC
Q 011407 181 GKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN 225 (486)
Q Consensus 181 G~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~ 225 (486)
+++.|.+-|..+ +...++++|.+... +..+.++++..||.|+
T Consensus 226 e~i~s~~lDnr~-~~~~~l~al~~~~~--~~~~~~~~~d~EEVGs 267 (428)
T PRK02813 226 EFISSGRLDNLS-SCHAGLEALLAAAS--DATNVLAAFDHEEVGS 267 (428)
T ss_pred CEEEEecchhHH-HHHHHHHHHHhcCC--CCeEEEEEEecCccCC
Confidence 466677766222 22234444444322 6799999999999984
Done!