Query 011407
Match_columns 486
No_of_seqs 177 out of 1437
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 07:30:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011407.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011407hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3io1_A Aminobenzoyl-glutamate 100.0 7.2E-60 2.4E-64 494.7 37.0 379 86-479 4-436 (445)
2 1xmb_A IAA-amino acid hydrolas 100.0 1.2E-59 4.1E-64 489.4 38.3 389 84-478 14-405 (418)
3 1ysj_A Protein YXEP; M20 famil 100.0 2.4E-58 8.1E-63 477.5 39.9 372 94-477 28-402 (404)
4 3ram_A HMRA protein; two-domai 100.0 1.1E-54 3.8E-59 448.5 32.5 366 84-485 4-386 (394)
5 3pfo_A Putative acetylornithin 100.0 3E-53 1E-57 443.0 35.5 371 82-477 12-430 (433)
6 1vgy_A Succinyl-diaminopimelat 100.0 1.3E-51 4.3E-56 425.5 33.6 361 97-478 5-381 (393)
7 1cg2_A Carboxypeptidase G2; me 100.0 1.3E-51 4.5E-56 425.4 31.6 366 84-477 7-392 (393)
8 3dlj_A Beta-Ala-His dipeptidas 100.0 9.8E-51 3.3E-55 430.0 38.2 375 82-476 11-483 (485)
9 3isz_A Succinyl-diaminopimelat 100.0 5.9E-51 2E-55 417.4 34.5 359 97-476 2-376 (377)
10 3rza_A Tripeptidase; phosphory 100.0 7.5E-50 2.6E-54 412.7 36.1 358 86-478 14-395 (396)
11 3pfe_A Succinyl-diaminopimelat 100.0 2E-50 6.9E-55 426.2 31.2 376 84-477 5-471 (472)
12 3gb0_A Peptidase T; NP_980509. 100.0 2E-49 6.7E-54 406.2 35.4 345 97-474 5-371 (373)
13 2zog_A Cytosolic non-specific 100.0 6.7E-49 2.3E-53 415.3 34.7 374 84-477 8-477 (479)
14 3tx8_A Succinyl-diaminopimelat 100.0 1.8E-49 6.2E-54 405.9 27.5 345 96-472 11-368 (369)
15 2pok_A Peptidase, M20/M25/M40 100.0 1.3E-48 4.4E-53 413.4 34.2 377 81-474 28-480 (481)
16 2f7v_A Aectylcitrulline deacet 100.0 4.4E-49 1.5E-53 403.2 29.3 341 94-473 5-367 (369)
17 3ct9_A Acetylornithine deacety 100.0 2.9E-49 9.9E-54 402.7 26.8 337 94-475 7-355 (356)
18 2rb7_A Peptidase, M20/M25/M40 100.0 2.5E-48 8.4E-53 397.0 25.9 337 97-477 5-361 (364)
19 3ife_A Peptidase T; metallopep 100.0 4.3E-47 1.5E-51 396.7 32.1 353 95-477 24-433 (434)
20 3khx_A Putative dipeptidase sa 100.0 3.6E-46 1.2E-50 395.4 31.1 364 86-477 24-491 (492)
21 1fno_A Peptidase T; metallo pe 100.0 1.3E-45 4.3E-50 383.6 31.0 347 99-477 3-407 (417)
22 2qyv_A XAA-His dipeptidase; YP 100.0 1.4E-44 4.8E-49 383.0 34.2 350 96-475 9-485 (487)
23 1z2l_A Allantoate amidohydrola 100.0 1.5E-44 5.3E-49 376.0 33.6 348 94-478 5-413 (423)
24 3n5f_A L-carbamoylase, N-carba 100.0 9.6E-44 3.3E-48 368.4 36.4 342 97-476 4-407 (408)
25 2v8h_A Beta-alanine synthase; 100.0 2.3E-44 8E-49 380.0 29.0 351 96-482 30-454 (474)
26 3mru_A Aminoacyl-histidine dip 100.0 6E-44 2E-48 378.0 31.0 349 96-475 12-487 (490)
27 1lfw_A PEPV; hydrolase, dipept 100.0 1.4E-43 4.8E-48 373.7 30.9 362 87-478 5-468 (470)
28 3t68_A Succinyl-diaminopimelat 100.0 2.9E-32 9.9E-37 266.4 20.4 251 97-476 5-268 (268)
29 4h2k_A Succinyl-diaminopimelat 100.0 5.4E-31 1.8E-35 257.6 22.9 252 95-476 3-268 (269)
30 1q7l_A Aminoacylase-1; catalys 99.9 2E-25 6.9E-30 208.0 14.4 158 96-255 8-183 (198)
31 2fvg_A Endoglucanase; TM1049, 99.9 1.3E-24 4.6E-29 219.3 14.9 249 103-477 3-336 (340)
32 2wyr_A Cobalt-activated peptid 99.9 1.6E-22 5.4E-27 203.4 18.0 242 100-473 4-331 (332)
33 1vhe_A Aminopeptidase/glucanas 99.9 1.2E-21 4.2E-26 200.1 21.8 256 98-477 7-355 (373)
34 2wzn_A TET3, 354AA long hypoth 99.9 1.4E-25 4.7E-30 223.4 -10.3 325 101-475 12-348 (354)
35 2gre_A Deblocking aminopeptida 99.9 2.9E-21 9.9E-26 195.5 19.4 245 96-473 4-344 (349)
36 1y0y_A FRV operon protein FRVX 99.8 3E-20 1E-24 188.4 19.9 249 100-476 8-350 (353)
37 1vho_A Endoglucanase; structur 99.8 2.3E-20 7.8E-25 188.7 18.1 250 98-480 5-340 (346)
38 1ylo_A Hypothetical protein SF 99.8 2.1E-18 7E-23 174.4 23.4 251 102-477 7-339 (348)
39 3cpx_A Aminopeptidase, M42 fam 99.8 1.3E-19 4.5E-24 181.2 13.0 239 94-473 13-320 (321)
40 1tkj_A Aminopeptidase, SGAP; d 99.7 1.2E-16 4.1E-21 156.9 10.1 134 96-246 5-160 (284)
41 1rtq_A Bacterial leucyl aminop 99.6 3E-15 1E-19 148.0 12.5 129 96-233 18-164 (299)
42 3kl9_A PEPA, glutamyl aminopep 99.6 6.3E-14 2.2E-18 141.3 22.1 246 99-475 4-345 (355)
43 3tc8_A Leucine aminopeptidase; 99.5 3.5E-13 1.2E-17 133.5 17.5 131 97-233 24-185 (309)
44 2vpu_A TET3, 354AA long hypoth 99.5 1.2E-12 4.3E-17 131.7 19.7 67 99-167 10-77 (354)
45 3gux_A Putative Zn-dependent e 99.4 1.3E-12 4.6E-17 129.4 16.2 132 96-233 25-188 (314)
46 2afw_A Glutaminyl-peptide cycl 99.4 6.5E-13 2.2E-17 133.0 13.3 136 84-233 21-190 (329)
47 3isx_A Endoglucanase; TM1050, 99.4 6.9E-12 2.4E-16 125.5 17.7 67 98-166 11-77 (343)
48 3pb6_X Glutaminyl-peptide cycl 99.1 6.6E-10 2.2E-14 110.7 14.0 134 84-233 29-194 (330)
49 4fuu_A Leucine aminopeptidase; 99.1 2.3E-09 7.9E-14 106.2 17.6 122 97-224 24-162 (309)
50 4fai_A CG5976, isoform B; alph 99.0 2.5E-09 8.6E-14 106.8 15.2 137 96-246 36-204 (330)
51 4f9u_A CG32412; alpha/beta hyd 99.0 2.4E-09 8.1E-14 106.2 14.4 124 97-233 10-163 (312)
52 1q7l_B Aminoacylase-1; catalys 98.9 2.4E-09 8.3E-14 85.5 5.9 80 390-477 1-81 (88)
53 2ek8_A Aminopeptidase; metallo 98.5 5.3E-07 1.8E-11 93.0 11.4 105 109-233 163-285 (421)
54 3iib_A Peptidase M28; YP_92679 98.4 5.4E-07 1.9E-11 93.5 9.4 99 119-234 204-317 (444)
55 3kas_A Transferrin receptor pr 97.7 4.7E-05 1.6E-09 82.0 8.3 77 141-234 266-350 (640)
56 3fed_A Glutamate carboxypeptid 97.7 5.4E-05 1.9E-09 82.4 8.1 75 141-233 312-394 (707)
57 3k9t_A Putative peptidase; str 87.2 2.6 9E-05 42.4 9.8 80 141-246 165-252 (435)
58 2glf_A Probable M18-family ami 86.3 1.6 5.6E-05 44.6 8.0 77 388-473 368-449 (450)
59 3fed_A Glutamate carboxypeptid 84.7 8.2 0.00028 41.8 13.0 56 78-137 8-67 (707)
60 2ijz_A Probable M18-family ami 84.4 0.75 2.6E-05 46.8 4.4 75 388-472 343-423 (428)
61 3vat_A Dnpep, aspartyl aminope 79.1 4.3 0.00015 41.9 7.7 80 388-476 404-488 (496)
62 2hc9_A Leucine aminopeptidase 77.4 20 0.00067 36.8 11.9 122 96-222 165-307 (491)
63 1y7e_A Probable M18-family ami 76.7 1.9 6.4E-05 44.3 4.3 76 387-471 376-456 (458)
64 1y7e_A Probable M18-family ami 73.8 2.1 7.3E-05 43.9 3.8 50 115-166 33-100 (458)
65 4eme_A M18 aspartyl aminopepti 73.7 5.5 0.00019 41.7 6.9 81 388-476 472-562 (571)
66 3kzw_A Cytosol aminopeptidase; 70.3 12 0.00042 38.5 8.3 115 96-222 195-338 (515)
67 1tkj_A Aminopeptidase, SGAP; d 70.0 14 0.00047 34.9 8.4 88 389-478 175-279 (284)
68 1lam_A Leucine aminopeptidase; 68.8 15 0.0005 37.8 8.6 123 96-222 159-305 (484)
69 2glf_A Probable M18-family ami 68.2 8 0.00027 39.4 6.6 52 115-166 31-97 (450)
70 3ij3_A Cytosol aminopeptidase; 67.2 10 0.00035 38.7 6.9 122 96-222 165-305 (482)
71 1gyt_A Cytosol aminopeptidase; 65.5 17 0.00057 37.6 8.3 115 96-222 179-325 (503)
72 2ijz_A Probable M18-family ami 65.4 1.6 5.6E-05 44.3 0.8 61 106-166 7-86 (428)
73 3h8g_F Cytosol aminopeptidase; 63.5 30 0.001 35.5 9.7 115 96-222 178-322 (497)
74 2glj_A Probable M18-family ami 61.5 5.4 0.00019 40.9 3.8 75 388-471 380-459 (461)
75 3jru_B Probable cytosol aminop 61.2 26 0.00088 35.9 8.7 115 96-222 174-317 (490)
76 3kr4_A M17 leucyl aminopeptida 59.9 1E+02 0.0036 31.7 12.8 116 96-222 203-349 (528)
77 4efd_A Aminopeptidase; structu 59.7 15 0.00053 37.7 6.7 114 97-222 203-345 (522)
78 3pei_A Cytosol aminopeptidase; 56.7 24 0.00083 36.1 7.6 115 96-222 162-306 (486)
79 1rtq_A Bacterial leucyl aminop 53.5 49 0.0017 31.2 9.0 87 389-479 198-291 (299)
80 3mru_A Aminoacyl-histidine dip 51.3 23 0.00079 36.3 6.6 88 269-367 301-394 (490)
81 4f9u_A CG32412; alpha/beta hyd 50.4 18 0.0006 34.7 5.2 57 416-478 241-301 (312)
82 3iib_A Peptidase M28; YP_92679 43.7 16 0.00056 37.0 4.0 81 391-478 350-434 (444)
83 2glj_A Probable M18-family ami 43.3 27 0.00093 35.6 5.5 43 181-225 253-295 (461)
84 2jvf_A De novo protein M7; tet 36.8 63 0.0022 23.5 5.0 63 333-408 15-80 (96)
85 4ds1_A Dynein light chain 1, c 33.8 40 0.0014 26.4 3.9 33 96-131 25-57 (97)
86 3pb6_X Glutaminyl-peptide cycl 33.7 42 0.0014 32.5 5.0 56 415-476 270-329 (330)
87 2ek8_A Aminopeptidase; metallo 30.5 61 0.0021 32.3 5.7 72 397-478 328-403 (421)
88 1yo3_A Dynein light chain 1; s 30.2 51 0.0018 26.0 4.0 32 97-131 31-62 (102)
89 3tc8_A Leucine aminopeptidase; 28.1 1.2E+02 0.004 28.9 7.0 80 392-473 222-308 (309)
90 3rjs_A Dynein light chain moto 26.8 66 0.0023 24.6 4.0 33 96-131 17-49 (89)
91 4eme_A M18 aspartyl aminopepti 25.9 2.7E+02 0.0092 29.0 9.6 51 115-165 21-91 (571)
92 4fai_A CG5976, isoform B; alph 22.3 75 0.0026 30.5 4.4 55 418-478 268-326 (330)
93 3tuf_A Stage III sporulation p 22.3 1.2E+02 0.0039 27.1 5.1 42 93-134 92-147 (197)
94 2afw_A Glutaminyl-peptide cycl 22.3 70 0.0024 30.7 4.2 53 418-476 272-328 (329)
95 3vat_A Dnpep, aspartyl aminope 21.1 2.3E+02 0.0077 29.0 7.8 52 114-165 49-119 (496)
No 1
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=7.2e-60 Score=494.71 Aligned_cols=379 Identities=25% Similarity=0.377 Sum_probs=307.6
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC--------------------------
Q 011407 86 EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------------------------- 139 (486)
Q Consensus 86 ~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------------------------- 139 (486)
+|.+++ +++++++++++|+|+++||++++|.++++||+++|+++||+++...
T Consensus 4 ~~~~~~--~~~~~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (445)
T 3io1_A 4 QLDEYL--RQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERARE 81 (445)
T ss_dssp CHHHHH--HTTHHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHT
T ss_pred hHHHHH--HHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcc
Confidence 567788 8899999999999999999999999999999999999999987642
Q ss_pred -------------CCceEEEEEcCC-CCcEEEEEeccCcccCcCCCCCcccc-------cCCCeeeecCchHHHHHHHHH
Q 011407 140 -------------AKTGIRAWVGTG-GPPFVALRADMDALPIQEAVEWEYKS-------KVAGKMHACGHDAHVAMLIGA 198 (486)
Q Consensus 140 -------------~~~nvia~~g~~-~~~~ill~gH~DtVP~~~~~~~p~~~-------~~dG~l~GrG~~g~~a~~l~a 198 (486)
+++||+|+++++ ++|+|+|+|||||||+++.+.|+++| +.+|++|||||+++++++|+|
T Consensus 82 ~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~a 161 (445)
T 3io1_A 82 QGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGL 161 (445)
T ss_dssp TTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHH
T ss_pred ccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHH
Confidence 579999999654 57999999999999998877775443 457999999999999999999
Q ss_pred HHHHHhcCCCCCceEEEEeecCCCCcCcHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeec
Q 011407 199 AKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKK 278 (486)
Q Consensus 199 a~~L~~~g~~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~ 278 (486)
+++|++.+.+++++|.|+|+++||.+.|++.|+++|.++++|++++.|+++..|.|.+.+..+..+ +..+++|+++|++
T Consensus 162 a~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~~-a~~~~~i~v~Gk~ 240 (445)
T 3io1_A 162 AHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFM-ATTKFDVQFSGVA 240 (445)
T ss_dssp HHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCBC-EEEEEEEEEECCC
T ss_pred HHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCee-EEEEEEEEEEeec
Confidence 999999888899999999999999767999999999998999999999876667787776555443 3468999999999
Q ss_pred CCC-CCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHH
Q 011407 279 GGA-ANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIE 357 (486)
Q Consensus 279 ~Ha-~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~ 357 (486)
+|+ +.|+.|+||+..+++++.+|+.+. +... +..+++++.|+||.+.|+||++|++.+++|+.+.++.+++.++|+
T Consensus 241 ~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~ 317 (445)
T 3io1_A 241 AHAGGKPEDGRNALLAAAQAALGLHAIP-PHSA--GASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQ 317 (445)
T ss_dssp SSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT--BCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC--CCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHHH
Confidence 999 579999999999999999999873 2222 347899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccc-cCCCcccchHHHHHhhcC-----cc
Q 011407 358 EVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRV-VPPMMGAEDFSFYSEVVP-----AA 431 (486)
Q Consensus 358 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~-~~~~~g~tD~~~~~~~~p-----~~ 431 (486)
++++..+..+++++++++. ..++++.+|+++++.+++++++++|.++... ...++|++|+++|++.+| .+
T Consensus 318 ~~~~~~a~~~g~~~~i~~~----~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~~~P~~gg~~~ 393 (445)
T 3io1_A 318 HVVAGAAAMYEARYELRMM----GAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMARVQARGGLAS 393 (445)
T ss_dssp HHHHHHHHHTTCEEEEEEE----EEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCCeEEEEEe----cCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHHHhcccCCceE
Confidence 9999999889999998876 3567788899999999999999877654321 233589999999998776 56
Q ss_pred EEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhcc
Q 011407 432 FYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYG 479 (486)
Q Consensus 432 ~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~~ 479 (486)
++++|++.. ..+|+++|++++++|..++++|+.++.+|+.+++
T Consensus 394 ~~~~G~~~~-----~~~H~~~E~i~~~~l~~g~~~~~~~~~~~~~~~~ 436 (445)
T 3io1_A 394 YMIFGTELS-----AGHHNEKFDFDESVMAVAVETLARVALNFPWQRG 436 (445)
T ss_dssp EEEEEEEC----------------CCCHHHHHHHHHHHHHHTCCSCC-
T ss_pred EEEEeCCCC-----CCCCCCCCcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 677898753 3699999999999999999999999999998763
No 2
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=1.2e-59 Score=489.35 Aligned_cols=389 Identities=56% Similarity=0.962 Sum_probs=317.3
Q ss_pred HHHHHHHhcCcchH--HHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEec
Q 011407 84 SKEVMELARRPETV--DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRAD 161 (486)
Q Consensus 84 ~~~i~~~~~~~~~~--~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH 161 (486)
++.+.+++ ++++ +++++++++|++|||+|++|.++++||+++|+++|++++..++++|+++++++++.|+|+|+||
T Consensus 14 ~~~i~~~~--~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH 91 (418)
T 1xmb_A 14 QTKLLEFA--KSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRAD 91 (418)
T ss_dssp --CHHHHH--HSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEE
T ss_pred HHHHHHHH--HhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEec
Confidence 34577888 8889 9999999999999999999999999999999999999987655789999995442289999999
Q ss_pred cCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCcccc
Q 011407 162 MDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVE 240 (486)
Q Consensus 162 ~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d 240 (486)
|||||+++++.|||.++++|++||||++++++++|+|++.|++.+.+++++|.|+|+++|| |+ |++.+++++.++++|
T Consensus 92 ~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE-g~~G~~~~~~~g~~~~~d 170 (418)
T 1xmb_A 92 MDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE-GLSGAKKMREEGALKNVE 170 (418)
T ss_dssp CCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT-TTCHHHHHHHTTTTTTEE
T ss_pred ccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecccc-ccccHHHHHHcCCcCCCC
Confidence 9999999999999999889999999999999999999999999888899999999999999 65 999999998877789
Q ss_pred EEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEE
Q 011407 241 AIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVT 320 (486)
Q Consensus 241 ~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~ 320 (486)
++++.|..++.|.|.+.+..+....|..+++|+++|+++|++.|+.|+||+..+++++.+|+.+..+...+....+++++
T Consensus 171 ~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg 250 (418)
T 1xmb_A 171 AIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVS 250 (418)
T ss_dssp EEEEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEE
T ss_pred EEEEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEE
Confidence 99998876556667654444444558899999999999999999999999999999999999875444344445789999
Q ss_pred EEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHH
Q 011407 321 YFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVA 400 (486)
Q Consensus 321 ~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~ 400 (486)
.|+||.+.|+||++|++.+++|++| +.+++.++|++++++.+..+++++++++.....++++++.+|+++++.+++++
T Consensus 251 ~i~gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~ 328 (418)
T 1xmb_A 251 KVNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVV 328 (418)
T ss_dssp EEC--------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHH
T ss_pred EEEecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEEccCCcccCCCccCCHHHHHHHHHHH
Confidence 9999999999999999999999999 89999999999999988888888887764210122666777999999999999
Q ss_pred HHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhc
Q 011407 401 IDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 478 (486)
Q Consensus 401 ~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~ 478 (486)
++++|.++...+....|++|+++|++.+|++++++|+++.+ +....+|++||+++++++..++++|+.++.+++...
T Consensus 329 ~~~~g~~~~~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 405 (418)
T 1xmb_A 329 RDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEK 405 (418)
T ss_dssp HHHHCGGGEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcceeccCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcC
Confidence 99889764322467889999999988899987778987532 123569999999999999999999999999999854
No 3
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.4e-58 Score=477.54 Aligned_cols=372 Identities=37% Similarity=0.592 Sum_probs=312.7
Q ss_pred cchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-CCceEEEEEc-CCCCcEEEEEeccCcccCcCCC
Q 011407 94 PETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-AKTGIRAWVG-TGGPPFVALRADMDALPIQEAV 171 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-~~~nvia~~g-~~~~~~ill~gH~DtVP~~~~~ 171 (486)
+++++++++++++|++|||+|++|.++++||.++|+++|++++... +++|++++++ ++++|+|+|+||+||||+++++
T Consensus 28 ~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~ 107 (404)
T 1ysj_A 28 KAFHTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQT 107 (404)
T ss_dssp HHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCC
Confidence 4567889999999999999999999999999999999999986543 4689999994 4356899999999999999888
Q ss_pred CCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcCcHHHHHHcCCCccccEEEEEecCCCC
Q 011407 172 EWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEH 251 (486)
Q Consensus 172 ~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~ 251 (486)
.+||.++.+|++||||++++++++|+|++.|++.+.+++++|.|+|+++||.+.|++.+++++.++++|+++..|..+..
T Consensus 108 ~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~ 187 (404)
T 1ysj_A 108 NLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDL 187 (404)
T ss_dssp CCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTS
T ss_pred CCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCC
Confidence 89999988999999999999999999999999987789999999999999995599999999888778999988766666
Q ss_pred CceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccc
Q 011407 252 PTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMI 331 (486)
Q Consensus 252 p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvI 331 (486)
+.|.+.+..|....|..+++|+++|+++|++.|+.|+||+..+++++.+|+.+..+...+....+++++.|+||.+.|+|
T Consensus 188 ~~g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvI 267 (404)
T 1ysj_A 188 PVGTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVI 267 (404)
T ss_dssp CTTEEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSC
T ss_pred CCceEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCcee
Confidence 66766665564445888999999999999999999999999999999999887544444445678999999999999999
Q ss_pred cCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHh-cCCCccc
Q 011407 332 PDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDL-LGPMNYR 410 (486)
Q Consensus 332 P~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~-~G~~~~~ 410 (486)
|++|++.+|+|++|.++.+++.++|++++++.+..+++++++++. ..++++.+++++++.++++++++ +|.++.
T Consensus 268 P~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~g~g~~~~- 342 (404)
T 1ysj_A 268 PDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKWF----PYLPSVQNDGTFLNAASEAAARLGYQTVHA- 342 (404)
T ss_dssp CSEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE----EEECCEEECGGGHHHHHHHHHHTTCEEEEC-
T ss_pred cCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEe----cCCCCccCCHHHHHHHHHHHHHhcCCcccc-
Confidence 999999999999999999999999999999988888888888765 24566667889999999999997 676543
Q ss_pred ccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 411 VVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 411 ~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
. ...|++|+++|++.+|++++++||++. ..+|++||+++++++.+++++|+.++.+|+++
T Consensus 343 -~-~~~g~tD~~~~~~~~p~~~~~~G~~~~-----~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 402 (404)
T 1ysj_A 343 -E-QSPGGEDFALYQEKIPGFFVWMGTNGT-----EEWHHPAFTLDEEALTVASQYFAELAVIVLET 402 (404)
T ss_dssp -C-CBSSCCTHHHHHTTSCEEEEEEECCCS-----SCTTCTTCCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred -c-cCCccchHHHHHHHCCeEEEEEcCCCC-----CCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 3 778899999998889988778899863 35999999999999999999999999999874
No 4
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-54 Score=448.45 Aligned_cols=366 Identities=21% Similarity=0.257 Sum_probs=317.3
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCC--CceEEEEEcCC-CCcEEEEEe
Q 011407 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLA--KTGIRAWVGTG-GPPFVALRA 160 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~--~~nvia~~g~~-~~~~ill~g 160 (486)
++.|.+++ +++++++++++++|++|||+|++|.++++||+++|+++|++++.... ++|++++++++ ++|+|+|++
T Consensus 4 ~~~i~~~~--~~~~~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~a 81 (394)
T 3ram_A 4 KQQILDYI--ETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLA 81 (394)
T ss_dssp HHHHHHHH--HHTHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEE
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEE
Confidence 56889999 99999999999999999999999999999999999999999887543 57999999554 579999999
Q ss_pred ccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc--CcHH-HHHHcCCCc
Q 011407 161 DMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG--NGAK-RMMADGALE 237 (486)
Q Consensus 161 H~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g--~G~~-~l~~~g~~~ 237 (486)
|||||| |++|+||+|++.+++|+|+++|++.+.+++++|.|+|+++||.+ .|++ .|++.|.++
T Consensus 82 h~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~ 147 (394)
T 3ram_A 82 EYDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVID 147 (394)
T ss_dssp CCCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGG
T ss_pred ecccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCcc
Confidence 999999 78899999999999999999999877778999999999999997 3999 999999888
Q ss_pred cccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCC-CCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeE
Q 011407 238 DVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRSVDPVLAASAAVISLQGLVSREANPLDSQV 316 (486)
Q Consensus 238 ~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~-~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~ 316 (486)
++|++++.|+++... .+...+|..+++|+++|+++|++ .|+.|+||+..+++++..|+.+.... + ...+
T Consensus 148 ~~d~~~~~h~~~~~~-------~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~--~-~~~~ 217 (394)
T 3ram_A 148 QIDIALMIHPGNETY-------KTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI--K-KDQR 217 (394)
T ss_dssp GCSEEECCEEESSBB-------CCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS--C-TTCE
T ss_pred cCCEEEEECCccccC-------CCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC--C-CCCe
Confidence 899999999865322 12334588999999999999999 79999999999999999999884322 1 2346
Q ss_pred EEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHH
Q 011407 317 VSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHV 396 (486)
Q Consensus 317 ~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l 396 (486)
++++.++||.+.|+||++|++.+++|+.+.++.+++.++|++++++.+..+|+++++++.. ..|+++.+|+++++.+
T Consensus 218 ~~~~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~~---~~~~~~~~d~~l~~~~ 294 (394)
T 3ram_A 218 VHGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQ---NGVNEFIKTPKLDDLF 294 (394)
T ss_dssp EEEEEEEBCSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEESS---CCBCCCCCCHHHHHHH
T ss_pred eEEEEEECCCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEec---CCCCCccCCHHHHHHH
Confidence 7788899999999999999999999999999999999999999999998899999988721 5678888899999999
Q ss_pred HHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCc-------CCCCchHHHHHHHHH
Q 011407 397 KKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFM-------IDEDVLPVGAAVHAT 469 (486)
Q Consensus 397 ~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~-------i~i~~l~~~~~i~~~ 469 (486)
++++++ +| .+......++|++|+++|++.+|++++++|.++.. ...|++ |+ ++.+.+..++++|+.
T Consensus 295 ~~a~~~-~G-~~~~~~~~~~g~~D~~~~~~~~P~~~~~~g~~~~~----~~~H~~-ef~~~~~~~~~~~~l~~g~~~la~ 367 (394)
T 3ram_A 295 AKYAEE-VG-EAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGSRN----LVGHTH-RFREAAASVHGDEALIKGAKIMAL 367 (394)
T ss_dssp HHHHHH-TT-CCBCCSCCCCBCCTHHHHTTTSCBCCCEEECSCTT----CCTTSH-HHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hC-cccccCCCCcccccHHHHHHHhchheEEeeecCCC----CCCCCH-HHHhccCCCccHHHHHHHHHHHHH
Confidence 999998 68 44323457889999999998899998888876532 359999 55 599999999999999
Q ss_pred HHHHHHhhc---ccccccC
Q 011407 470 IAERFLNEY---GQGWNNW 485 (486)
Q Consensus 470 ~i~~~l~~~---~~~~~~~ 485 (486)
++.+++.++ +++|+.|
T Consensus 368 ~~~~~l~~~~~~~~~~~~~ 386 (394)
T 3ram_A 368 MGLELITNQDVYQDIIEEH 386 (394)
T ss_dssp HHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHH
Confidence 999999976 5666554
No 5
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3e-53 Score=442.95 Aligned_cols=371 Identities=14% Similarity=0.110 Sum_probs=311.0
Q ss_pred hhHHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEec---------------------CC
Q 011407 82 ACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP---------------------LA 140 (486)
Q Consensus 82 ~~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~---------------------~~ 140 (486)
+.++.|.+++ +++++++++++++|++|||+|++|.++++||+++|+++|++++.. ++
T Consensus 12 ~~~~~i~~~i--~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (433)
T 3pfo_A 12 AITQSLRAAV--DRNFNDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAG 89 (433)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGG
T ss_pred HHHHHHHHHH--HhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCC
Confidence 4577899999 999999999999999999999999999999999999999998652 35
Q ss_pred CceEEEEEcC-CCCcEEEEEeccCcccCcCC---CCCcccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCce
Q 011407 141 KTGIRAWVGT-GGPPFVALRADMDALPIQEA---VEWEYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGT 212 (486)
Q Consensus 141 ~~nvia~~g~-~~~~~ill~gH~DtVP~~~~---~~~p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~ 212 (486)
++|+++++++ +++|+|+|+|||||||+++. +..||.+ +++|++||||+ | ++++++|+|+++|++.+.+++++
T Consensus 90 ~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 169 (433)
T 3pfo_A 90 SMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDAR 169 (433)
T ss_dssp CEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred CcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCcc
Confidence 7899999954 45799999999999998765 4457776 56899999999 3 89999999999999988888999
Q ss_pred EEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHH
Q 011407 213 VILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPV 291 (486)
Q Consensus 213 I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi 291 (486)
|.|+|+++||.|+ |++.+++++. ++|++++.+++. + .+.. + ..|..+++|+++|+++|++.|+.|+||+
T Consensus 170 v~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~ep~~--~--~i~~--~--~~G~~~~~i~v~G~~~Ha~~p~~g~nAi 239 (433)
T 3pfo_A 170 VHVQTVTEEESTGNGALSTLMRGY--RADACLIPEPTG--H--TLTR--A--QVGAVWFRLRVRGTPVHVAYSETGTSAI 239 (433)
T ss_dssp EEEEEESCTTTTCHHHHHHHHTTC--CCSEEEECCCCS--S--CEEE--E--ECEEEEEEEEEECCCCBGGGGGGSCCHH
T ss_pred EEEEEEecCccCChhHHHHHhcCC--CCCEEEEeCCCC--C--ceEE--e--cceEEEEEEEEEcCCCccCCCCcCcCHH
Confidence 9999999999986 9999998874 689999877542 1 2221 1 2388999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcc-----cCC-----CCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHH
Q 011407 292 LAASAAVISLQGLVSRE-----ANP-----LDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIV 361 (486)
Q Consensus 292 ~~a~~~i~~L~~l~~~~-----~~~-----~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 361 (486)
..+++++..|+.+..+. .++ ....+++++.|+||.+.|+||++|++.+++|++|+++.+++.++|+++++
T Consensus 240 ~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~ 319 (433)
T 3pfo_A 240 LSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLA 319 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 99999999999875432 122 22458999999999999999999999999999999999999999999999
Q ss_pred HHHhhcC----ceeEEEEecCCCCCCCC--CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh--hcCccEE
Q 011407 362 EQARVFR----CSATVDFFDKGNTVYPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE--VVPAAFY 433 (486)
Q Consensus 362 ~~~~~~g----~~~~v~~~~~~~~~~~~--~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~--~~p~~~~ 433 (486)
+.+..++ +++++++.. ..+++ ...|+++++.+.+++++++|.++. ...+.|++|+++|.. ++|++
T Consensus 320 ~~~~~~~~~~~~~~~v~~~~---~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~~--~~~~~g~~D~~~~~~~~giP~v-- 392 (433)
T 3pfo_A 320 DAQATDSFLSENPAELVWSG---FQADPAVCEPGGVAEDVLTAAHKAAFNAPLD--ARLSTAVNDTRYYSVDYGIPAL-- 392 (433)
T ss_dssp HHHTTCHHHHHSCCEEEEEE---EEECCEECCTTCHHHHHHHHHHHHHHSSCCC--EEEESSCCTHHHHHHTTCCCEE--
T ss_pred HHhhhCcccccCCeEEEEec---ccCCcccCCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeeccHHHHHhhCCCCEE--
Confidence 9876542 446665531 12333 335889999999999998898652 456788999999986 48876
Q ss_pred EEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 434 YIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 434 ~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
.+||+. ..+|++||+++++++..++++|+.++.+||..
T Consensus 393 ~~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~~ 430 (433)
T 3pfo_A 393 CYGPYG------QGPHAFDERIDLESLRKTTLSIALFVAEWCGL 430 (433)
T ss_dssp ECCCCE------ECTTSTTCEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred EECCCC------ccCCCCCceEEHHHHHHHHHHHHHHHHHHhcc
Confidence 378874 35999999999999999999999999999874
No 6
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.3e-51 Score=425.51 Aligned_cols=361 Identities=17% Similarity=0.238 Sum_probs=293.6
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEec--CCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCC-
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--LAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEW- 173 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~- 173 (486)
.+++++++++|++|||+|++|.++++||.++|+++|++++.. +..+|+++++|. ++|+|+|+|||||||+++...|
T Consensus 5 ~~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~Vp~~~~~~w~ 83 (393)
T 1vgy_A 5 ETQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRGT-KAPVVCFAGHTDVVPTGPVEKWD 83 (393)
T ss_dssp CSHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSSEEEEEEECCBCCCCCGGGSS
T ss_pred hHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEECC-CCCEEEEEcccCCcCCCCcccCC
Confidence 357899999999999999999999999999999999998764 346899999954 3689999999999998765445
Q ss_pred --cccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc--CcHHHHHHcCCC--ccccEEE
Q 011407 174 --EYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG--NGAKRMMADGAL--EDVEAIF 243 (486)
Q Consensus 174 --p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g--~G~~~l~~~g~~--~~~d~~i 243 (486)
||.+ +++|++||||+ | ++++++|.+++.|++.+.+++++|.|+|+++||.+ .|++.+++.+.. ..+|+++
T Consensus 84 ~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i 163 (393)
T 1vgy_A 84 SPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCI 163 (393)
T ss_dssp SCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEE
Confidence 7777 47899999999 5 77889999999999887789999999999999986 388888764322 2478888
Q ss_pred EEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc-cCCCCCeEEEEEEE
Q 011407 244 AVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE-ANPLDSQVVSVTYF 322 (486)
Q Consensus 244 ~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~-~~~~~~~~~~v~~i 322 (486)
+.+++...+.+.. +..|. .|..+++|+++|+++|++.|+.|+||+..+++++.+|+.+..+. ..+....+++++.|
T Consensus 164 ~~e~~~~~~~g~~-i~~g~--~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i 240 (393)
T 1vgy_A 164 VGEPTAVDKLGDM-IKNGR--RGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNI 240 (393)
T ss_dssp ECCCCBSSSTTSE-EECEE--CEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEE
T ss_pred EeCCCCcccCCce-eEEee--eeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeE
Confidence 8877543333322 12232 27889999999999999999999999999999999998864221 12334568999999
Q ss_pred ecCc-cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHH
Q 011407 323 NGGD-HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAI 401 (486)
Q Consensus 323 ~gG~-~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~ 401 (486)
+||. +.|+||++|++.+|+|++|.++.+++.++|++++++ .++++++++.. ..+|...+++++++.+.++++
T Consensus 241 ~gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~----~~~~~~~~~~~---~~~p~~~~~~~l~~~~~~~~~ 313 (393)
T 1vgy_A 241 NGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK----HGVQYDLQWSC---SGQPFLTQAGKLTDVARAAIA 313 (393)
T ss_dssp EECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEEE---EECCEECCSSHHHHHHHHHHH
T ss_pred cCCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHH----hCCCeEEEEec---CCCcccCCCcHHHHHHHHHHH
Confidence 9997 899999999999999999999999999999998875 45666666542 122334468899999999999
Q ss_pred HhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhc
Q 011407 402 DLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 478 (486)
Q Consensus 402 ~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~ 478 (486)
+++|.++. ...+.|++|++++.. .+|++ .+||++. .+|++||+++++++.+++++|+.++.+++...
T Consensus 314 ~~~g~~~~--~~~~~g~~D~~~~~~~~~P~v--~~Gp~~~------~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~~ 381 (393)
T 1vgy_A 314 ETCGIEAE--LSTTGGTSDGRFIKAMAQELI--ELGPSNA------TIHQINENVRLNDIPKLSAVYEGILVRLLAGN 381 (393)
T ss_dssp HHHSSCCE--EECCSCCCTHHHHGGGEEEEE--ECCSBCT------TTTSTTCEEETTHHHHHHHHHHHHHHHHC---
T ss_pred HHcCCCce--EecCCccchHHHHHhCCCCEE--EECCCCC------CCCCCCCceeHHHHHHHHHHHHHHHHHHhccC
Confidence 98898663 356778999999987 68853 4788753 49999999999999999999999999998754
No 7
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.3e-51 Score=425.41 Aligned_cols=366 Identities=16% Similarity=0.190 Sum_probs=304.3
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCCh---HHHHHHHHHHHHhCCCceEecC-----CCceEEEEEcCCCCcE
Q 011407 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQE---FETSRLLRAELDRMEIGYKYPL-----AKTGIRAWVGTGGPPF 155 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E---~~~a~~l~~~L~~~G~~v~~~~-----~~~nvia~~g~~~~~~ 155 (486)
.+.+.+++ ++.++++++++++|++|||+|++| .++++||+++|+++|++++... .++|+++++++.++|+
T Consensus 7 ~~~~~~~~--~~~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~~~~ 84 (393)
T 1cg2_A 7 DNVLFQAA--TDEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKN 84 (393)
T ss_dssp CHHHHHHH--HHHHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSSCCC
T ss_pred hhHHHHHH--HhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCCCce
Confidence 45688888 888999999999999999999876 6899999999999999987653 2579999996433589
Q ss_pred EEEEeccCcccC-cCCCCCcccccCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHH
Q 011407 156 VALRADMDALPI-QEAVEWEYKSKVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRM 230 (486)
Q Consensus 156 ill~gH~DtVP~-~~~~~~p~~~~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l 230 (486)
|+|++||||||. ++++.|||. .++|++||||+ | ++++++|+|++.|++.+.+++++|.|+|+++||.|+ |++.+
T Consensus 85 i~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~ 163 (393)
T 1cg2_A 85 LLLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDL 163 (393)
T ss_dssp EEEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHHH
T ss_pred EEEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHHH
Confidence 999999999986 445778998 57899999997 4 899999999999999888888899999999999986 99999
Q ss_pred HHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCC-CCCCCCcHHHHHHHHHHHHHhhhhccc
Q 011407 231 MADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRSVDPVLAASAAVISLQGLVSREA 309 (486)
Q Consensus 231 ~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~-~p~~G~nAi~~a~~~i~~L~~l~~~~~ 309 (486)
++++. .++|++++.|++.. +.+.+.. +. .|..+++|+++|+++|+| .|+.|+||+..+++++.+|+.+..
T Consensus 164 ~~~~~-~~~d~~i~~e~~~~-~~~~i~~--~~--~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~--- 234 (393)
T 1cg2_A 164 IQEEA-KLADYVLSFEPTSA-GDEKLSL--GT--SGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDD--- 234 (393)
T ss_dssp HHHHH-HHCSEEEECCCEET-TSCEEES--EE--CEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCB---
T ss_pred HHHHh-hcCCEEEEeCCCCC-CCCcEEE--ee--eeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhC---
Confidence 88643 36899998886421 2344322 21 278899999999999997 599999999999999999988742
Q ss_pred CCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCC-
Q 011407 310 NPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVN- 388 (486)
Q Consensus 310 ~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~- 388 (486)
+....+++++.|+||.+.|+||++|++++++|++|.++.+++.++|++++++ +...++++++++.. .+++..+
T Consensus 235 -~~~~~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~ 308 (393)
T 1cg2_A 235 -KAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ-KKLPEADVKVIVTR----GRPAFNAG 308 (393)
T ss_dssp -TTTTEEEEEEEEEECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS-CSSTTCEEEEEEEE----CSCCEECH
T ss_pred -cccCceEEEEEEeCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc-ccCCCcEEEEEecc----ccCCccCC
Confidence 2245789999999999999999999999999999999999999999999976 33457777777652 3555544
Q ss_pred --CHHHHHHHHHHHHHhcCCCcccccCC-CcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCC-CCCcCCCCchHHH
Q 011407 389 --DEDMYEHVKKVAIDLLGPMNYRVVPP-MMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHS-PYFMIDEDVLPVG 463 (486)
Q Consensus 389 --d~~~v~~l~~a~~~~~G~~~~~~~~~-~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~-~dE~i~i~~l~~~ 463 (486)
++++++.+++++++ +|.++. +.. ..|++|+++++.. +|+++ .+||+. ..+|+ +||+++++++.++
T Consensus 309 ~~~~~l~~~~~~~~~~-~g~~~~--~~~~~~g~tD~~~~~~~giP~~~-~~G~~~------~~~H~~~~E~i~~~~l~~~ 378 (393)
T 1cg2_A 309 EGGKKLVDKAVAYYKE-AGGTLG--VEERTGGGTDAAYAALSGKPVIE-SLGLPG------FGYHSDKAEYVDISAIPRR 378 (393)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCCE--EESCBSCCCTHHHHGGGSCCEEC-CCSCEE------ECTTSSSCCEEEGGGHHHH
T ss_pred cchHHHHHHHHHHHHH-hCCCCc--cccCCCcccHHHHHHhCCCCEEE-eCCCCC------CCccCCCcceEEehhHHHH
Confidence 47899999999986 687542 345 7789999999876 89863 467754 25999 9999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 011407 464 AAVHATIAERFLNE 477 (486)
Q Consensus 464 ~~i~~~~i~~~l~~ 477 (486)
+++|+.++.+++++
T Consensus 379 ~~~~~~~~~~l~~~ 392 (393)
T 1cg2_A 379 LYMAARLIMDLGAG 392 (393)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999863
No 8
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=9.8e-51 Score=430.04 Aligned_cols=375 Identities=16% Similarity=0.135 Sum_probs=303.0
Q ss_pred hhHHHHHHHhcCcchHHHHHHHHHHhhhCCCC--CCC------hHHHHHHHHHHHHhCCCceEecC--------C-----
Q 011407 82 ACSKEVMELARRPETVDWLKSVRRTIHQNPEL--AFQ------EFETSRLLRAELDRMEIGYKYPL--------A----- 140 (486)
Q Consensus 82 ~~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~--s~~------E~~~a~~l~~~L~~~G~~v~~~~--------~----- 140 (486)
+.++.+.+++ +++++++++++++|++|||+ |++ |.++++||+++|+++|++++... +
T Consensus 11 ~~~~~i~~~i--~~~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~ 88 (485)
T 3dlj_A 11 ALLEKVFQYI--DLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPI 88 (485)
T ss_dssp TTHHHHHHHH--HHTHHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEEC
T ss_pred HHHHHHHHHH--HHhHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCC
Confidence 3456899999 99999999999999999999 887 67999999999999999987643 2
Q ss_pred CceEEEEEcCC-CCcEEEEEeccCcccCcCC---CCCccccc-CCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCce
Q 011407 141 KTGIRAWVGTG-GPPFVALRADMDALPIQEA---VEWEYKSK-VAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGT 212 (486)
Q Consensus 141 ~~nvia~~g~~-~~~~ill~gH~DtVP~~~~---~~~p~~~~-~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~ 212 (486)
.+|++++++++ ++|+|+|+|||||||+++. +..||.+. ++|++||||++ ++++++|+|+++|++.+.+++++
T Consensus 89 ~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 168 (485)
T 3dlj_A 89 PPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVN 168 (485)
T ss_dssp CCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSE
T ss_pred CcEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCcc
Confidence 25799999654 4699999999999998754 45578774 78999999994 89999999999999998899999
Q ss_pred EEEEeecCCCCcC-cHHHHHHcCC---CccccEEEEEecCC---CCCceeEEeccCcccceeeEEEEEEEeecC--CCCC
Q 011407 213 VILIFQPAEEAGN-GAKRMMADGA---LEDVEAIFAVHVSH---EHPTGVIGSRPGPLLAGCGFFHAVISGKKG--GAAN 283 (486)
Q Consensus 213 I~~~~~~dEE~g~-G~~~l~~~g~---~~~~d~~i~~~~~~---~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~--Ha~~ 283 (486)
|.|+|+++||.|+ |++.+++++. ++++|++++.|+.. ..+...+ | ..|..+++|+++|+++ |+|.
T Consensus 169 v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----g--~~g~~~~~i~v~G~~~~~H~~~ 242 (485)
T 3dlj_A 169 IKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITY----G--TRGNSYFMVEVKCRDQDFHSGT 242 (485)
T ss_dssp EEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEEEE----E--ECEEEEEEEEEESCSSCEETTT
T ss_pred EEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeEEE----e--ccceEEEEEEEEECCCCCcCCC
Confidence 9999999999986 9999998753 56799999998642 1222222 2 2388999999999999 9997
Q ss_pred CCCCCcHHHHHHHHHHHHHhhhhcc-----------cCC-------------C---------------------------
Q 011407 284 PHRSVDPVLAASAAVISLQGLVSRE-----------ANP-------------L--------------------------- 312 (486)
Q Consensus 284 p~~G~nAi~~a~~~i~~L~~l~~~~-----------~~~-------------~--------------------------- 312 (486)
.|.||+..++.++..|+.+..+. ..| .
T Consensus 243 --~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 320 (485)
T 3dlj_A 243 --FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLW 320 (485)
T ss_dssp --STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHH
T ss_pred --CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHh
Confidence 35566666666666665553221 111 0
Q ss_pred CCeEEEEEEEecC----ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcC--ceeEEEEecCCCCCCCCC
Q 011407 313 DSQVVSVTYFNGG----DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFR--CSATVDFFDKGNTVYPPT 386 (486)
Q Consensus 313 ~~~~~~v~~i~gG----~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g--~~~~v~~~~~~~~~~~~~ 386 (486)
...+++|+.|+|| .+.||||++|++++++|+.+.++.+++.++|+++++..+..+| +++++++.. .++++
T Consensus 321 ~~~~~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~~~----~~pp~ 396 (485)
T 3dlj_A 321 RYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTL----GLHPW 396 (485)
T ss_dssp TSCEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEEEE----EECCE
T ss_pred cCCceEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEEcC----CCCce
Confidence 1578999999999 8999999999999999999999999999999999999988888 477777652 35554
Q ss_pred CC--CHHHHHHHHHHHHHhcCCCcccccCCCcccchHH-HHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHH
Q 011407 387 VN--DEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFS-FYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVG 463 (486)
Q Consensus 387 ~~--d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~-~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~ 463 (486)
.+ ++++++.+.+++++++|.++.. ....|+.|++ +|.+.+|..++++|++... ..+|+++|+++++++..+
T Consensus 397 ~~~~d~~~~~~~~~a~~~~~G~~~~~--~~~ggs~Dfa~~~~~~~p~~~i~~g~g~~~----~~~H~p~E~i~~~~l~~g 470 (485)
T 3dlj_A 397 IANIDDTQYLAAKRAIRTVFGTEPDM--IRDGSTIPIAKMFQEIVHKSVVLIPLGAVD----DGEHSQNEKINRWNYIEG 470 (485)
T ss_dssp ECCTTSHHHHHHHHHHHHHHSSCCEE--EEESSCCHHHHHHHHHTC--CEECCCBCTT----CCTTSTTCEEEHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHhCCCcee--cCCCCchhHHHHHHHHhCCCEEEecCCCCC----CCCcCCCCCccHHHHHHH
Confidence 43 5699999999999988987642 3466788974 6777788877778887542 469999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 011407 464 AAVHATIAERFLN 476 (486)
Q Consensus 464 ~~i~~~~i~~~l~ 476 (486)
+++|+.++.++.+
T Consensus 471 ~~~l~~~l~~la~ 483 (485)
T 3dlj_A 471 TKLFAAFFLEMAQ 483 (485)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998764
No 9
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=5.9e-51 Score=417.41 Aligned_cols=359 Identities=16% Similarity=0.209 Sum_probs=287.7
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEec--CCCceEEEEEcCCCCcEEEEEeccCcccCcCC---C
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--LAKTGIRAWVGTGGPPFVALRADMDALPIQEA---V 171 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~---~ 171 (486)
.+++++++++|++|||+|++|.++++||+++|+++|++++.. ++.+|+++++|. ++|+|+|+|||||||+++. +
T Consensus 2 ~~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g~-~~~~i~l~aH~D~vp~~~~~~w~ 80 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGT-SEPVIAFAGHTDVVPTGDENQWS 80 (377)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEES-SSCEEEEEEECCBCCCCCGGGCS
T ss_pred chHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeCC-CCCEEEEeccccccCCCCcccCC
Confidence 578999999999999999999999999999999999998853 356899999854 4799999999999998764 4
Q ss_pred CCccccc-CCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcCCC--ccccEEE
Q 011407 172 EWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADGAL--EDVEAIF 243 (486)
Q Consensus 172 ~~p~~~~-~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g~~--~~~d~~i 243 (486)
..||.+. ++|++||||+ | +++++++.+++.|++.+.+++++|.|+|+++||.++ |++.+++.... ..+|+++
T Consensus 81 ~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~ 160 (377)
T 3isz_A 81 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 160 (377)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEE
Confidence 5577775 6899999999 5 788899999999888887889999999999999974 99888764221 2479998
Q ss_pred EEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc-cCCCCCeEEEEEEE
Q 011407 244 AVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE-ANPLDSQVVSVTYF 322 (486)
Q Consensus 244 ~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~-~~~~~~~~~~v~~i 322 (486)
+.+++...+.|.. +..|.. |..+++|+++|+++|++.|+.|+||+..+++++.+|+....+. ......++++++.+
T Consensus 161 ~~e~~~~~~~g~~-i~~g~~--g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i 237 (377)
T 3isz_A 161 VGEPSSAKNLGDV-VKNGRR--GSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANI 237 (377)
T ss_dssp ECCCCBSSSTTSE-EEEEEC--EEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEE
T ss_pred EcCCCCcccCCce-EEEEcc--eEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEE
Confidence 8877544443322 122322 7889999999999999999999999999999999998864222 22245678999999
Q ss_pred ecCc-cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHH
Q 011407 323 NGGD-HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAI 401 (486)
Q Consensus 323 ~gG~-~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~ 401 (486)
+||. +.|+||++|++.+|+|++|.++.+++.+++++++++ +|+++++++.. ..+|...+++++++.++++++
T Consensus 238 ~gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~----~g~~~~i~~~~---~~~p~~~~~~~l~~~l~~a~~ 310 (377)
T 3isz_A 238 HAGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK----HNLKYRIEWNL---SGKPFLTKPGKLLDSITSAIE 310 (377)
T ss_dssp EECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEEE---CCCCEECCTTHHHHHHHHHHH
T ss_pred ECCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCeEEEEEe---cCCCCcCCCCHHHHHHHHHHH
Confidence 9998 899999999999999999999999999999999875 57778877652 122333467899999999999
Q ss_pred HhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 402 DLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 402 ~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+++|.++. ...+.|++|++++... +|++ .+||+.. .+|++||+++++++.+++++|+.++.++|.
T Consensus 311 ~~~g~~~~--~~~~~g~tDa~~~~~~g~~~v--~~Gp~~~------~~H~~~E~i~~~~l~~~~~i~~~~i~~ll~ 376 (377)
T 3isz_A 311 ETIGITPK--AETGGGTSDGRFIALMGAEVV--EFGPLNS------TIHKVNECVSVEDLGKCGEIYHKMLVNLLD 376 (377)
T ss_dssp HHHSCCCE--EEECSSCCSHHHHHTTTCEEE--ECCSBCT------TTTSTTCEEEHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhCCCCe--eeccCcccHHHHHHHcCCCEE--EECCCCC------cccCCCCcEEHHHHHHHHHHHHHHHHHHhh
Confidence 98898763 3456789999998875 4443 3688753 599999999999999999999999999885
No 10
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.5e-50 Score=412.68 Aligned_cols=358 Identities=18% Similarity=0.208 Sum_probs=296.9
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-------CCceEEEEEcC----CCCc
Q 011407 86 EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------AKTGIRAWVGT----GGPP 154 (486)
Q Consensus 86 ~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~~~nvia~~g~----~~~~ 154 (486)
....|+ +..++++++++++|++|||+|++|.++++||+++|+++|++++.+. +++|+++++++ .++|
T Consensus 14 ~~~~~~--~~~~~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~ 91 (396)
T 3rza_A 14 NLYFQG--MINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVP 91 (396)
T ss_dssp -----C--CSCHHHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CC
T ss_pred ceeEEE--eecHHHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCC
Confidence 456677 7889999999999999999999999999999999999999988653 36899999943 3479
Q ss_pred EEEEEeccCcccCcCCCCCcccc-cCC-CeeeecCc-----h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC
Q 011407 155 FVALRADMDALPIQEAVEWEYKS-KVA-GKMHACGH-----D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN 225 (486)
Q Consensus 155 ~ill~gH~DtVP~~~~~~~p~~~-~~d-G~l~GrG~-----~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~ 225 (486)
+|+|+|||||||+++ +|+| .++ |++||||+ | ++++++|++++.|++.+. ++++|.|+|+++||.|+
T Consensus 92 ~i~l~aH~D~vp~g~----~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~ 166 (396)
T 3rza_A 92 KLYLTSHMDTVVPAI----NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGL 166 (396)
T ss_dssp CEEEEEECCBCSSCS----SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGGTS
T ss_pred eEEEEEECCccCCCC----CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEccccccc
Confidence 999999999999753 4556 344 99999998 5 899999999999998764 68999999999999987
Q ss_pred -cHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhh
Q 011407 226 -GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGL 304 (486)
Q Consensus 226 -G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l 304 (486)
|++.+..++. ++|+++..+++ .+.+.+.+.. .|..+++|+++|+++|++.|+.|+||+..+++++.+|+..
T Consensus 167 ~Ga~~~~~~~~--~~~~~~~~~~~--~~~g~i~~~~----~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~ 238 (396)
T 3rza_A 167 IGAKELNSELL--DADFGYAIDAS--ADVGTTVVGA----PTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLG 238 (396)
T ss_dssp HHHHHCCGGGC--CCSEEEEEEES--SCTTCEEEEE----CEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCE
T ss_pred HhHhhhchhhc--ccceEEEEecC--CCcceEEEcC----CceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccC
Confidence 9998876543 46888877764 2345444322 2788999999999999999999999999999999998753
Q ss_pred hhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCC
Q 011407 305 VSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYP 384 (486)
Q Consensus 305 ~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~ 384 (486)
. .. ...+++++.|+||.+.|+||++|++.+++|+.|.++.+++.++|++++++.+..+|+++++++.. .+|
T Consensus 239 ~---~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~i~~~~----~~p 309 (396)
T 3rza_A 239 Q---VD--EITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQ----SYP 309 (396)
T ss_dssp E---EE--TTEEEEEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEE----EEC
T ss_pred C---CC--CCceeeeeEEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEEEe----ccC
Confidence 1 12 23688999999999999999999999999999999999999999999999888889988888753 455
Q ss_pred CC--CCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCchH
Q 011407 385 PT--VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLP 461 (486)
Q Consensus 385 ~~--~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~ 461 (486)
+. .+|+++++.+++++++ +|.+. ....+.|++|+++|+.. +|+++ +|++.. .+|+++|+++++++.
T Consensus 310 ~~~~~~d~~l~~~~~~~~~~-~g~~~--~~~~~~g~tD~~~~~~~giP~~~--~g~g~~------~~H~~~E~v~~~~l~ 378 (396)
T 3rza_A 310 GFKINDNEAVVKIAQESARN-LGLSA--NTIISGGGSDGSIINTFGIPSVI--LGVGYE------KIHTTNERMPIKSLN 378 (396)
T ss_dssp CEECCTTSHHHHHHHHHHHH-TTCCC--CEEECSSCCHHHHHGGGTCCEEE--EECCCB------STTSTTCEEEHHHHH
T ss_pred CcccCCCcHHHHHHHHHHHH-cCCCc--eecccceeccHHHHhhCCCcEEE--ECCCCC------CCCCCcceeEHHHHH
Confidence 54 4689999999999998 58755 24567789999999875 89875 577653 499999999999999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 011407 462 VGAAVHATIAERFLNEY 478 (486)
Q Consensus 462 ~~~~i~~~~i~~~l~~~ 478 (486)
.++++|+.++.++.++.
T Consensus 379 ~~~~~~~~~~~~l~~~~ 395 (396)
T 3rza_A 379 LLASQVLEIIKIVARQS 395 (396)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999987643
No 11
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=2e-50 Score=426.17 Aligned_cols=376 Identities=10% Similarity=0.029 Sum_probs=298.0
Q ss_pred HHHHHHHhcCcchH-HHHHHHHHHhhhCCCCCCC----------hHHHHHHHHHHHHhCCCc---eEec--CC-CceEEE
Q 011407 84 SKEVMELARRPETV-DWLKSVRRTIHQNPELAFQ----------EFETSRLLRAELDRMEIG---YKYP--LA-KTGIRA 146 (486)
Q Consensus 84 ~~~i~~~~~~~~~~-~~l~~ll~~lv~iPs~s~~----------E~~~a~~l~~~L~~~G~~---v~~~--~~-~~nvia 146 (486)
.+.+.+++ ++++ +++++++++|++|||+|++ |.++++||+++|+++||+ ++.. ++ ++||++
T Consensus 5 ~~~~~~~~--~~~~~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a 82 (472)
T 3pfe_A 5 PQGLYDYI--CQQWQEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFM 82 (472)
T ss_dssp HHHHHHHH--HHHHHHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEE
T ss_pred HHHHHHHH--HHhhHHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEE
Confidence 34688888 8888 8999999999999999965 899999999999999985 4432 23 689999
Q ss_pred EEcCCCCcEEEEEeccCcccCcC-CC--CCcccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeec
Q 011407 147 WVGTGGPPFVALRADMDALPIQE-AV--EWEYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQP 219 (486)
Q Consensus 147 ~~g~~~~~~ill~gH~DtVP~~~-~~--~~p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~ 219 (486)
++++.++|+|+|+|||||||+++ |+ ..||.+ +++|++||||+ | ++++++|+|+++|++.+.+++ +|.|+|++
T Consensus 83 ~~~g~~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~ 161 (472)
T 3pfe_A 83 EIPGQIDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEA 161 (472)
T ss_dssp EECCSEEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEES
T ss_pred EEcCCCCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEe
Confidence 99544468999999999999853 35 678888 57999999999 5 999999999999999887777 99999999
Q ss_pred CCCCcC-cHHHHHHcC--CCccccEEEEEecCCCCCceeEEeccCcccceeeEEE--EEEEeecCCCCCCCCC-CcHHHH
Q 011407 220 AEEAGN-GAKRMMADG--ALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFH--AVISGKKGGAANPHRS-VDPVLA 293 (486)
Q Consensus 220 dEE~g~-G~~~l~~~g--~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~--i~v~G~~~Ha~~p~~G-~nAi~~ 293 (486)
+||.|+ |++.+++++ .++++|++++.|++...+ +...+..|.+ |..+++ |+++|+++|++.|+.+ .||+..
T Consensus 162 ~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~i~~g~~--G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~ 238 (472)
T 3pfe_A 162 CEESGSYDLPFYIELLKERIGKPSLVICLDSGAGNY-EQLWMTTSLR--GNLVGKLTVELINEGVHSGSASGIVADSFRV 238 (472)
T ss_dssp CGGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCSCS-SSCEEEEEEC--EEEEEEEEEESCSSCBCHHHHTTTSCCHHHH
T ss_pred CCCCCChhHHHHHHHhHhhccCCCEEEEeCCCcCCC-CCeeEEEeee--EEEEEEEEEEeCCCCcccCCCCCCCCCHHHH
Confidence 999986 999999875 344789999998653211 2222223333 555555 6668999999997755 599999
Q ss_pred HHHHHHHHHhhh-hcc--------c-----------------------------CCCC------------CeEEEEEEEe
Q 011407 294 ASAAVISLQGLV-SRE--------A-----------------------------NPLD------------SQVVSVTYFN 323 (486)
Q Consensus 294 a~~~i~~L~~l~-~~~--------~-----------------------------~~~~------------~~~~~v~~i~ 323 (486)
+++++.+|+.+. .+. . .++. .++++|+.|+
T Consensus 239 ~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~ 318 (472)
T 3pfe_A 239 ARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGAD 318 (472)
T ss_dssp HHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEE
T ss_pred HHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeee
Confidence 999999998762 100 0 0010 4689999999
Q ss_pred cC----ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCC-CCCCCC--CC-HHHHHH
Q 011407 324 GG----DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNT-VYPPTV--ND-EDMYEH 395 (486)
Q Consensus 324 gG----~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~-~~~~~~--~d-~~~v~~ 395 (486)
|| .+.|+||++|++++++|+.|.++.+++.++|+++++..+ .++++++++.. . .++++. .+ +.+++.
T Consensus 319 gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v~~~----~~~~pp~~~~~n~~~l~~~ 393 (472)
T 3pfe_A 319 GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDFKIQ----NGGSKGWNAPLLSDWLAKA 393 (472)
T ss_dssp SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEEEEC----SCCBCCEECCCCCHHHHHH
T ss_pred cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEEEec----CCCCCcccCCCCChHHHHH
Confidence 87 689999999999999999999999999999999998865 56778877764 2 344443 23 457899
Q ss_pred HHHHHHHhcCCCcccccCCCcccch-H-HHHHhhcCcc-EEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHH
Q 011407 396 VKKVAIDLLGPMNYRVVPPMMGAED-F-SFYSEVVPAA-FYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAE 472 (486)
Q Consensus 396 l~~a~~~~~G~~~~~~~~~~~g~tD-~-~~~~~~~p~~-~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~ 472 (486)
+++++++++|.++. ....|++| | .+|.+.+|.+ ++++|+++.. ..+|++||+++++++..++++|+.++.
T Consensus 394 ~~~a~~~~~G~~~~---~~~~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~----~~~H~p~E~i~~~~l~~g~~~l~~~l~ 466 (472)
T 3pfe_A 394 ASEASMTYYDKPAA---YMGEGGTIPFMSMLGEQFPKAQFMITGVLGPH----SNAHGPNEFLHLDMVKKLTSCVSYVLY 466 (472)
T ss_dssp HHHHHHHHHSSCCE---EEEESSCCHHHHHHHHHCTTCEEEEECCBCTT----CCTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCce---eccCCCchhhHHHHHHHcCCCCEEEecCCCCC----CCCcCCCcceeHHHHHHHHHHHHHHHH
Confidence 99999998898654 12456667 5 5677778875 7788987643 469999999999999999999999999
Q ss_pred HHHhh
Q 011407 473 RFLNE 477 (486)
Q Consensus 473 ~~l~~ 477 (486)
++.++
T Consensus 467 ~la~~ 471 (472)
T 3pfe_A 467 SFSQK 471 (472)
T ss_dssp HHHHC
T ss_pred HHhhc
Confidence 88654
No 12
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=2e-49 Score=406.20 Aligned_cols=345 Identities=19% Similarity=0.233 Sum_probs=292.2
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-------CCceEEEEEcCC--CCcEEEEEeccCcccC
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------AKTGIRAWVGTG--GPPFVALRADMDALPI 167 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~~~nvia~~g~~--~~~~ill~gH~DtVP~ 167 (486)
++++++++++|++|||+|++|.++++||.++|+++|++++.+. +++|+++++.+. ++|+|+|+|||||||+
T Consensus 5 ~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~ 84 (373)
T 3gb0_A 5 QERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVP 84 (373)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSS
T ss_pred HHHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCC
Confidence 6789999999999999999999999999999999999988754 258999999432 4799999999999997
Q ss_pred cCCCCCcccc-cCCCeeeecCc-----h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCcc
Q 011407 168 QEAVEWEYKS-KVAGKMHACGH-----D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALED 238 (486)
Q Consensus 168 ~~~~~~p~~~-~~dG~l~GrG~-----~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~ 238 (486)
++ +|.| .++|++||||+ | ++++++|++++.|++.+. ++++|.|+|+++||.|+ |++.+..++. +
T Consensus 85 ~~----~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~ 157 (373)
T 3gb0_A 85 GN----GIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--T 157 (373)
T ss_dssp CS----SCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--C
T ss_pred CC----CcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--C
Confidence 54 4556 46899999997 5 789999999999998875 78999999999999986 9988865533 4
Q ss_pred ccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCC-CCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEE
Q 011407 239 VEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRSVDPVLAASAAVISLQGLVSREANPLDSQVV 317 (486)
Q Consensus 239 ~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~-~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~ 317 (486)
+|+++..+++ .+.+.+.+.. .|..+++|+++|+++|++ .|+.|+||+..+++++.+|+.. + .. ...++
T Consensus 158 ~~~~~~~~~~--~~~g~i~~~~----~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~--~-~~--~~~~~ 226 (373)
T 3gb0_A 158 AKYGYALDSD--GKVGEIVVAA----PTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG--R-ID--SETTA 226 (373)
T ss_dssp CSEEEEEEEC--SCTTEEEEEE----CEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE--E-EE--TTEEE
T ss_pred CCEEEEEcCC--CCCCeEEEcC----CCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc--c-CC--Ccccc
Confidence 7888877764 3445554322 278899999999999999 6999999999999999988753 1 11 24678
Q ss_pred EEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCC--CCCHHHHHH
Q 011407 318 SVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPT--VNDEDMYEH 395 (486)
Q Consensus 318 ~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~--~~d~~~v~~ 395 (486)
+++.|+||.+.|+||++|++.+++|+.|.++.+++.++|++++++.+..+|+++++++.. .+++. .+|+++++.
T Consensus 227 ~vg~i~gG~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~~~~----~~~~~~~~~~~~l~~~ 302 (373)
T 3gb0_A 227 NIGRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEVNV----MYPGFKFADGDHVVEV 302 (373)
T ss_dssp EEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEE----EECCEECCTTCHHHHH
T ss_pred ceeEEecCcccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEec----ccCCcccCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999988899998887753 34554 468899999
Q ss_pred HHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 396 VKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 396 l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
+++++++ +|.++. ...+.|++|+++++.. +|+++ +|++.. .+|++||+++++++..++++|+.++.+|
T Consensus 303 ~~~~~~~-~g~~~~--~~~~~g~~D~~~~~~~gip~~~--~g~~~~------~~H~~~E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 303 AKRAAEK-IGRTPS--LHQSGGGSDANVIAGHGIPTVN--LAVGYE------EIHTTNEKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp HHHHHHH-TTCCCE--EEECSSCCHHHHHHHTTCCEEE--EECCCB------STTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCCCce--EecccCcchHHHHHhCCCCEEE--ecCCCC------cCcCCceEEEHHHHHHHHHHHHHHHHHh
Confidence 9999998 587652 4567889999999875 89875 577653 4999999999999999999999999988
No 13
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=6.7e-49 Score=415.30 Aligned_cols=374 Identities=13% Similarity=0.093 Sum_probs=302.5
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCCh------HHHHHHHHHHHHhCCCceEecC--------CC-----ceE
Q 011407 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQE------FETSRLLRAELDRMEIGYKYPL--------AK-----TGI 144 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E------~~~a~~l~~~L~~~G~~v~~~~--------~~-----~nv 144 (486)
++.+.+++ ++.++++++++++|++|||+|++| .++++||+++|+++|++++... ++ +||
T Consensus 8 ~~~~~~~~--~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v 85 (479)
T 2zog_A 8 LKAVFQYI--DENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPIL 85 (479)
T ss_dssp HHHHHHHH--HHTHHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEE
T ss_pred HHHHHHHH--HHhHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEE
Confidence 56788888 888999999999999999999876 7999999999999999987643 23 899
Q ss_pred EEEEcCC-CCcEEEEEeccCcccCcCC---CCCcccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEE
Q 011407 145 RAWVGTG-GPPFVALRADMDALPIQEA---VEWEYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILI 216 (486)
Q Consensus 145 ia~~g~~-~~~~ill~gH~DtVP~~~~---~~~p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~ 216 (486)
+++++++ ++|+|+|+|||||||+++. +..||.+ .++|++||||+ | ++++++|+|++.|++.+.+++++|.|+
T Consensus 86 ~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~ 165 (479)
T 2zog_A 86 LGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFC 165 (479)
T ss_dssp EEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEE
T ss_pred EEEecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEE
Confidence 9999654 4689999999999998654 4447777 46899999995 5 899999999999999988899999999
Q ss_pred eecCCCCcC-cHHHHHHcC---CCccccEEEEEecCCCCC-ceeEEeccCcccceeeEEEEEEEeec--CCCCCCCCCCc
Q 011407 217 FQPAEEAGN-GAKRMMADG---ALEDVEAIFAVHVSHEHP-TGVIGSRPGPLLAGCGFFHAVISGKK--GGAANPHRSVD 289 (486)
Q Consensus 217 ~~~dEE~g~-G~~~l~~~g---~~~~~d~~i~~~~~~~~p-~g~i~~~~G~~~ag~~~~~i~v~G~~--~Ha~~p~~G~n 289 (486)
|+++||.|+ |++.+++++ ++.++|++++.+++...+ .+.+.+ + .+|..+++|+++|++ +|||.+ |.|
T Consensus 166 ~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~--~--~~G~~~~~i~v~G~~~~~Hs~~~--g~~ 239 (479)
T 2zog_A 166 LEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITY--G--LRGICYFFIEVECSDKDLHSGVY--GGS 239 (479)
T ss_dssp EESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEE--E--ECEEEEEEEEEECCSSCEEHHHH--TTT
T ss_pred EecccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEE--e--cceEEEEEEEEEeCCCCCccCCC--CCC
Confidence 999999986 999999875 455789999888643111 233322 2 238889999999999 999985 789
Q ss_pred HHHHHHHHHHHHHhhhhccc-----------C-------------CC---------------------------CCeEEE
Q 011407 290 PVLAASAAVISLQGLVSREA-----------N-------------PL---------------------------DSQVVS 318 (486)
Q Consensus 290 Ai~~a~~~i~~L~~l~~~~~-----------~-------------~~---------------------------~~~~~~ 318 (486)
|+..+++++..|+.+..+.. . +. ...+++
T Consensus 240 ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 319 (479)
T 2zog_A 240 VHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLS 319 (479)
T ss_dssp SCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEE
T ss_pred ccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeE
Confidence 99999999998877643210 0 00 136899
Q ss_pred EEEEecC----ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhc--CceeEEEEecCCCCCCCC--CCCCH
Q 011407 319 VTYFNGG----DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVF--RCSATVDFFDKGNTVYPP--TVNDE 390 (486)
Q Consensus 319 v~~i~gG----~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~--g~~~~v~~~~~~~~~~~~--~~~d~ 390 (486)
++.|+|| .+.|+||++|++.+++|+.|+++.+++.++|++++++.+..+ +..+++++.. .+++ ...|+
T Consensus 320 v~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~d~ 395 (479)
T 2zog_A 320 LHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGH----GGKPWVSDFNH 395 (479)
T ss_dssp EEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEE----EECCEECCTTS
T ss_pred EeeeecCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEecC----CCCceecCCCC
Confidence 9999998 799999999999999999999999999999999999887665 5667776642 2344 34588
Q ss_pred HHHHHHHHHHHHhcCCCcccccCCCcccchH-HHHHhh--cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHH
Q 011407 391 DMYEHVKKVAIDLLGPMNYRVVPPMMGAEDF-SFYSEV--VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVH 467 (486)
Q Consensus 391 ~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~-~~~~~~--~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~ 467 (486)
++++.+.+++++++|.++. .....|++|+ ++|.+. +|++++.+|++. ..+|++||+++++++.+++++|
T Consensus 396 ~~~~~~~~a~~~~~g~~~~--~~~~~gs~d~~~~~~~~~~~p~~~~g~g~~~------~~~H~~~E~i~~~~l~~~~~~~ 467 (479)
T 2zog_A 396 PHYQAGRRALKTVFGVEPD--LTREGGSIPVTLTFQEATGKNVMLLPVGSAD------DGAHSQNEKLNRLNYIEGTKML 467 (479)
T ss_dssp HHHHHHHHHHHHHHSSCCE--EEEESSCCTHHHHHHHHHCSEEEECCCBCTT------CCTTSTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCce--ecCCCCccchHHHHHHHhCCCEEEecCCCCc------cCCCCCCCcEeHHHHHHHHHHH
Confidence 9999999999998898764 2345788998 477653 777654345543 3599999999999999999999
Q ss_pred HHHHHHHHhh
Q 011407 468 ATIAERFLNE 477 (486)
Q Consensus 468 ~~~i~~~l~~ 477 (486)
+.++.+++..
T Consensus 468 ~~~~~~~~~~ 477 (479)
T 2zog_A 468 AAYLYEVSQL 477 (479)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999999864
No 14
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.8e-49 Score=405.88 Aligned_cols=345 Identities=16% Similarity=0.166 Sum_probs=278.6
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCc-eEecCCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCCc
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIG-YKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWE 174 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~-v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p 174 (486)
+++++++++++|++|||+|++|.++++||.++|+++|++ ++....++|++++++++++|+|+|+|||||||+++ |
T Consensus 11 ~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~----~ 86 (369)
T 3tx8_A 11 LLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD----N 86 (369)
T ss_dssp CCSCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS----C
T ss_pred cHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC----C
Confidence 456789999999999999999999999999999999884 44433467999998655579999999999999865 4
Q ss_pred ccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC---cHHHHHHcCC-CccccEEEEEe
Q 011407 175 YKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN---GAKRMMADGA-LEDVEAIFAVH 246 (486)
Q Consensus 175 ~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~---G~~~l~~~g~-~~~~d~~i~~~ 246 (486)
|++ .++|++||||+ | ++++++|+|+++|++. .+++++|.|+|+++||.|+ |++.+++.+. ..++|+++..+
T Consensus 87 ~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~e 165 (369)
T 3tx8_A 87 LPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGE 165 (369)
T ss_dssp CSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECC
T ss_pred CCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEEeC
Confidence 544 35899999999 6 8999999999999874 4789999999999999984 8999998752 12578888777
Q ss_pred cCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccC--CC-CCeEEEEEEEe
Q 011407 247 VSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREAN--PL-DSQVVSVTYFN 323 (486)
Q Consensus 247 ~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~--~~-~~~~~~v~~i~ 323 (486)
++. +.+.. |. .|..+++|+++|+++|++.|+.|+||+..+++++.+|+++..+... +. ...+++++.|+
T Consensus 166 p~~----~~i~~--~~--~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~ 237 (369)
T 3tx8_A 166 PTG----GWIEA--GC--QGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCE 237 (369)
T ss_dssp CCT----TCEEE--SB--CEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEE
T ss_pred CCC----Cceee--ec--ceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEE
Confidence 643 23322 22 3889999999999999999999999999999999999987543321 11 14689999999
Q ss_pred cCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 011407 324 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDL 403 (486)
Q Consensus 324 gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~ 403 (486)
||.+.|+||++|++++|+|++|.++.+++.++|++++++.+ ..+++++++... +++++ ..+++.++.+.+++
T Consensus 238 gG~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~-~~g~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~--- 309 (369)
T 3tx8_A 238 SGVANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDGA---GGALP-GLGQQVTSGLIDAV--- 309 (369)
T ss_dssp ECSBTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-STTEEEEEEEEE---CCBCC-CTTSHHHHHHHHHH---
T ss_pred CCCCCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-cCCeEEEEEecC---CCCCC-CCCCHHHHHHHHHc---
Confidence 99999999999999999999999999999999999998766 556666664321 33333 34777877776653
Q ss_pred cCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHH
Q 011407 404 LGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAE 472 (486)
Q Consensus 404 ~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~ 472 (486)
|... +....|++|+++|.+. +|++ .+||+.. ..+|++||+++++++.+++++|+.++.
T Consensus 310 -g~~~---~~~~~ggtD~~~~~~~giP~~--~~Gpg~~-----~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 310 -GREK---IRAKFGWTDVSRFSAMGIPAL--NFGAGDP-----SFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp -CGGG---EEECCSCCTHHHHHTTTCCEE--EECSSCS-----SSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred -CCCC---CcccccccchHHHhhCCCCEE--EECCCCh-----hhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 5421 2345688999999875 8886 4788764 369999999999999999999998875
No 15
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=1.3e-48 Score=413.45 Aligned_cols=377 Identities=12% Similarity=0.112 Sum_probs=297.7
Q ss_pred hhhHHHHHHHhcCcchHH-HHHHHHHHhhhCCCCCCCh---HHHHHHHHHHHHhCCCceEecC--CCceEEEEEcC--CC
Q 011407 81 RACSKEVMELARRPETVD-WLKSVRRTIHQNPELAFQE---FETSRLLRAELDRMEIGYKYPL--AKTGIRAWVGT--GG 152 (486)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~-~l~~ll~~lv~iPs~s~~E---~~~a~~l~~~L~~~G~~v~~~~--~~~nvia~~g~--~~ 152 (486)
.+.++.+.+++ ++.++ ++++++++|++|||+|++| .++++||+++|+++|++++... +++|+++++++ .+
T Consensus 28 ~~~m~~~~~~~--~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~ 105 (481)
T 2pok_A 28 PSEQEQIEKFE--KDHVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPD 105 (481)
T ss_dssp CCHHHHHHHHH--HCHHHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTT
T ss_pred cchHHHHHHHH--HhhhhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCC
Confidence 34467889999 88999 9999999999999999876 8999999999999999987653 46899999943 34
Q ss_pred CcEEEEEeccCcccCcCCCCC---cccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC
Q 011407 153 PPFVALRADMDALPIQEAVEW---EYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN 225 (486)
Q Consensus 153 ~~~ill~gH~DtVP~~~~~~~---p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~ 225 (486)
+|+|+|+|||||||+++.+.| ||.+ .++|++||||+ | ++++++|+|++.|++.+..++++|.|+|+++||.|+
T Consensus 106 ~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~ 185 (481)
T 2pok_A 106 AKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESAS 185 (481)
T ss_dssp CCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTT
T ss_pred CCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCc
Confidence 689999999999998775555 7777 46899999997 3 899999999999999866889999999999999986
Q ss_pred -cHHHHHHcC--CCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeec--CCCCCCCCCCcHHHHHHHHHHH
Q 011407 226 -GAKRMMADG--ALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKK--GGAANPHRSVDPVLAASAAVIS 300 (486)
Q Consensus 226 -G~~~l~~~g--~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~--~Ha~~p~~G~nAi~~a~~~i~~ 300 (486)
|++.+++++ .++++|++++.+++... .+...+..+. .|..+++|+++|++ +||+.|+.|+||+..+++++.+
T Consensus 186 ~g~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~i~~~~--~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~ 262 (481)
T 2pok_A 186 TDLDKYLEKHADKLRGADLLVWEQGTKNA-LEQLEISGGN--KGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQS 262 (481)
T ss_dssp TTHHHHHHHHHHHHTTCSEEECSCCBBCT-TSCEEEECCB--CEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHH
T ss_pred hhHHHHHHHhHhhccCCCEEEECCCCccC-CCCeeEEEec--ceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHH
Confidence 888888764 23348999876653211 1112222233 38899999999999 8998899999999999999999
Q ss_pred HHhhh-----------------------hccc--------------CC-------------CCCeEEEEEEEecCc----
Q 011407 301 LQGLV-----------------------SREA--------------NP-------------LDSQVVSVTYFNGGD---- 326 (486)
Q Consensus 301 L~~l~-----------------------~~~~--------------~~-------------~~~~~~~v~~i~gG~---- 326 (486)
|+... .+.. .+ ...++++++.|+||.
T Consensus 263 l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~ 342 (481)
T 2pok_A 263 LRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQG 342 (481)
T ss_dssp TBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSS
T ss_pred hhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCC
Confidence 87642 1100 00 024689999999986
Q ss_pred cCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 011407 327 HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGP 406 (486)
Q Consensus 327 ~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~ 406 (486)
+.|+||++|++.+++|++|+++.+++.++|+++++..+. .++++++... .+++ ....|+++++.+.+++++++|.
T Consensus 343 ~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~~~~---~p~~-~~~~d~~l~~~~~~a~~~~~g~ 417 (481)
T 2pok_A 343 VKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVELYYTLG---EMSY-RSDMSAPAILNVIELAKKFYPQ 417 (481)
T ss_dssp CCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEEEEEEE---ECCB-CCCSCSHHHHHHHHHHTTTCTT
T ss_pred CCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEEEEccC---CCcc-cCCCCCHHHHHHHHHHHHHcCC
Confidence 789999999999999999999999999999999988654 4555554322 1221 3345899999999999998888
Q ss_pred CcccccCCCcccchHHHHHhh--cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHH
Q 011407 407 MNYRVVPPMMGAEDFSFYSEV--VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 474 (486)
Q Consensus 407 ~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~ 474 (486)
++.. .....|++|+++|.+. +|++ .+||+... ..+|++||+++++++.+++++|+.++.++
T Consensus 418 ~~~~-~~~~gg~~D~~~~~~~~g~p~v--~~G~g~~~----~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 418 GVSV-LPTTAGTGPMHTVFDALEVPMV--AFGLGNAN----SRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp CEEE-ESCBSSCCTHHHHHHHHCCCEE--BCCSBCTT----CCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred Cccc-cccCCCCCchHHHHHHcCCCEE--EecCCCcc----cCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 6631 2334444499988765 7774 46887532 46999999999999999999999988653
No 16
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=4.4e-49 Score=403.20 Aligned_cols=341 Identities=15% Similarity=0.067 Sum_probs=275.9
Q ss_pred cchHHHHHHHHHHhhhCCCCC--C---ChHHHHHHHHHHHHhCCCceEecC---CCceEEEEEcCCCCcEEEEEeccCcc
Q 011407 94 PETVDWLKSVRRTIHQNPELA--F---QEFETSRLLRAELDRMEIGYKYPL---AKTGIRAWVGTGGPPFVALRADMDAL 165 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s--~---~E~~~a~~l~~~L~~~G~~v~~~~---~~~nvia~~g~~~~~~ill~gH~DtV 165 (486)
+++++++++++++|++|||+| + +|.++++||.++|+ ||+++... +++|+++ +++. |+|+|++|||||
T Consensus 5 ~~~~~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~D~v 79 (369)
T 2f7v_A 5 TDLLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHLDTV 79 (369)
T ss_dssp CHHHHHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEECCBC
T ss_pred hhhhHHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeeeccc
Confidence 678899999999999999999 8 89999999999999 99987643 4689999 8533 789999999999
Q ss_pred cCcC-CCCCcccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCC-cC-cHHHHHHcCCCcc
Q 011407 166 PIQE-AVEWEYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEA-GN-GAKRMMADGALED 238 (486)
Q Consensus 166 P~~~-~~~~p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~-g~-G~~~l~~~g~~~~ 238 (486)
|+++ |+..||.+ .++|++||||+. ++++++|.+++. ++++|.|+|+++||. |. |++.+++++. +
T Consensus 80 p~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~~~--~ 150 (369)
T 2f7v_A 80 PDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLARGL--P 150 (369)
T ss_dssp CCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTTCC--C
T ss_pred CCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhcCC--C
Confidence 9986 77788988 468999999994 677777776654 789999999999999 64 9999999865 6
Q ss_pred ccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCC-CCCcHHHHHHHHHHHHHhhhhccc----CCCC
Q 011407 239 VEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPH-RSVDPVLAASAAVISLQGLVSREA----NPLD 313 (486)
Q Consensus 239 ~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~-~G~nAi~~a~~~i~~L~~l~~~~~----~~~~ 313 (486)
+|++++.+++. +.+. .+ ..|..+++|+++|+++|++.|+ .|+||+..+++++.+|+.+..+.. .+..
T Consensus 151 ~d~~i~~e~~~----~~i~--~~--~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 222 (369)
T 2f7v_A 151 YDAVLVAEPTM----SEAV--LA--HRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHARFGGLT 222 (369)
T ss_dssp CSEEEECCCST----TCBB--CC--BCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCEETTEE
T ss_pred CCEEEECCCCC----Ccce--ee--cCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccccCccc
Confidence 89999877642 2221 12 2378899999999999999999 999999999999999988754321 2211
Q ss_pred CeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCC-HHH
Q 011407 314 SQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVND-EDM 392 (486)
Q Consensus 314 ~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d-~~~ 392 (486)
..+++++.|+||.+.|+||++|++++|+|++|.++.+++.++|++++++. +++++++... ..+++...+ +++
T Consensus 223 ~~~~~vg~i~gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~l 295 (369)
T 2f7v_A 223 GLRFNIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPA----AAHFEETFRG---PSLPSGDIARAEE 295 (369)
T ss_dssp SCEEEEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSC----CSEEEEEEEE---CCBSCSSHHHHHH
T ss_pred CCceEEEEeecCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHHh----cCceEEEecc---CCCCccCCCCCHH
Confidence 16899999999999999999999999999999999999999999987653 4566665531 235565556 899
Q ss_pred HHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHH
Q 011407 393 YEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIA 471 (486)
Q Consensus 393 v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i 471 (486)
++.+++++++++|.++. ....|++|++++... +|++ .+||+.. ..+|++||+++++++.+++++|+.++
T Consensus 296 ~~~~~~a~~~~~g~~~~---~~~~g~~D~~~~~~~g~p~v--~~Gpg~~-----~~~H~~~E~~~~~~l~~~~~~~~~~~ 365 (369)
T 2f7v_A 296 RRLAARDVADALDLPIG---NAVDFWTEASLFSAGGYTAL--VYGPGDI-----AQAHTADEFVTLAQLQRYVESVNRII 365 (369)
T ss_dssp HHHHHHHHHHHTTCCBC---CCBSSCCTHHHHHHTTCCEE--ECCSSCG-----GGTTCTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCC---ccccccCcHHHHhhCCCCEE--EECCCCc-----cccCCCCceEEHHHHHHHHHHHHHHH
Confidence 99999999998887653 457899999999875 8876 5788653 35999999999999999999999887
Q ss_pred HH
Q 011407 472 ER 473 (486)
Q Consensus 472 ~~ 473 (486)
.+
T Consensus 366 ~~ 367 (369)
T 2f7v_A 366 NG 367 (369)
T ss_dssp HC
T ss_pred Hh
Confidence 53
No 17
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2.9e-49 Score=402.68 Aligned_cols=337 Identities=15% Similarity=0.130 Sum_probs=273.2
Q ss_pred cchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC-C-CCcEEEEEeccCcccCcC-C
Q 011407 94 PETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-G-GPPFVALRADMDALPIQE-A 170 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~-~-~~~~ill~gH~DtVP~~~-~ 170 (486)
+++++++++++++|++|||+|++|.++++||.++|+++|++++.. ++|+++++++ + ++|+|+|++||||||+++ |
T Consensus 7 ~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w 84 (356)
T 3ct9_A 7 PTMTAEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGW 84 (356)
T ss_dssp HHHHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC---
T ss_pred hHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCCCC
Confidence 556789999999999999999999999999999999999998875 7899999943 3 468999999999999865 4
Q ss_pred CCCccccc-CCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCC-cC-cHHHHHHcCCCccccEEEE
Q 011407 171 VEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEA-GN-GAKRMMADGALEDVEAIFA 244 (486)
Q Consensus 171 ~~~p~~~~-~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~-g~-G~~~l~~~g~~~~~d~~i~ 244 (486)
+..||.++ ++|++||||+ | ++++++|+|++.|++.+ ++++|.|+|+++||. |. |++.+++++ .++|+++.
T Consensus 85 ~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~~i~ 160 (356)
T 3ct9_A 85 RKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSFAIV 160 (356)
T ss_dssp ----CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSEEEE
T ss_pred CCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCEEEE
Confidence 66788885 5899999999 5 68999999999999876 889999999999998 64 999999886 36898887
Q ss_pred EecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCC-CCCeEEEEEEEe
Q 011407 245 VHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANP-LDSQVVSVTYFN 323 (486)
Q Consensus 245 ~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~-~~~~~~~v~~i~ 323 (486)
.+++. +.+.. + ..|..+++|+++|+++|++.| .|+||+..+++++.+|+.+..+..++ .+..+++++.|+
T Consensus 161 ~ep~~----~~i~~--~--~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~ 231 (356)
T 3ct9_A 161 GEPTE----MQPAI--A--EKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVIN 231 (356)
T ss_dssp CCSBT----TCCEE--E--ECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEEEEEE
T ss_pred cCCCC----ceEEE--e--eeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEeeEEe
Confidence 77643 22211 1 127789999999999999999 99999999999999999875443333 345789999999
Q ss_pred cCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCC--CCCCHHHHHHHHHHHH
Q 011407 324 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP--TVNDEDMYEHVKKVAI 401 (486)
Q Consensus 324 gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~--~~~d~~~v~~l~~a~~ 401 (486)
||.+.|+||++|++.+++|++|.++.+++.++|+++++. +++++. . .+++ ..+++++++.++++++
T Consensus 232 gG~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~-------~~~~~~-~----~~~~~~~~~~~~l~~~~~~~~~ 299 (356)
T 3ct9_A 232 AGTQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC-------DAKARS-F----RLNSSRIDEKHPFVQKAVKMGR 299 (356)
T ss_dssp ECSSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS-------EEEESC-S----CSCCEECCTTSHHHHHHHHTTC
T ss_pred cCCcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC-------eEEEee-c----cCCCCCCCCCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999998753 333321 1 2333 3467889988877654
Q ss_pred HhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHH
Q 011407 402 DLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 475 (486)
Q Consensus 402 ~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l 475 (486)
+ + ....+++|++. ..+|++ .+||+.. ..+|++||+++++++..++++|+.++.++|
T Consensus 300 ~-----~----~~~~g~tD~~~--~~~p~v--~~G~g~~-----~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 355 (356)
T 3ct9_A 300 I-----P----FGSPTLSDQAL--MSFASV--KIGPGRS-----SRSHTAEEYIMLKEIEEAIGIYLDLLDGLK 355 (356)
T ss_dssp C-----C----EEECSCCGGGG--CCSCEE--ECCSSBG-----GGTTSTTCEEEHHHHHHHHHHHHHHHTTCC
T ss_pred C-----C----cccccccchhh--cCCCEE--EECCCcc-----ccCcCCCcEEEHHHHHHHHHHHHHHHHHhh
Confidence 2 1 23578999993 358875 4788753 359999999999999999999999987654
No 18
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=2.5e-48 Score=396.99 Aligned_cols=337 Identities=14% Similarity=0.089 Sum_probs=276.3
Q ss_pred HHHHHHHHHHhhhCCCCC---CChHHHHHHHHHHHHhCCCceEecCCCceEEEEEc---CCCCcEEEEEeccCcccCcCC
Q 011407 97 VDWLKSVRRTIHQNPELA---FQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG---TGGPPFVALRADMDALPIQEA 170 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s---~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g---~~~~~~ill~gH~DtVP~~~~ 170 (486)
++++++++++|++|||+| ++|.++++||.++|+++|++++.. ..|+++.+. ++++|+|+|++||||||.
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~--- 79 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA--- 79 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---
Confidence 678999999999999999 889999999999999999998764 367888773 234689999999999985
Q ss_pred CCCccccc-CCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCC---Cce--EEEEeecCCCCcC--cHHHHHHcCCCccc
Q 011407 171 VEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLL---KGT--VILIFQPAEEAGN--GAKRMMADGALEDV 239 (486)
Q Consensus 171 ~~~p~~~~-~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l---~~~--I~~~~~~dEE~g~--G~~~l~~~g~~~~~ 239 (486)
+..||.+. ++|++||||+ | ++++++|+|++.|++.+.++ +++ |.|+|+++||.++ |++.+++.+ ++
T Consensus 80 ~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~ 156 (364)
T 2rb7_A 80 EDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RA 156 (364)
T ss_dssp CGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EE
T ss_pred CCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CC
Confidence 57889885 5899999999 6 68999999999999877666 578 9999999999753 999999885 57
Q ss_pred cEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCC--CCeEE
Q 011407 240 EAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPL--DSQVV 317 (486)
Q Consensus 240 d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~--~~~~~ 317 (486)
|+++..+ +++|.+ +.+. . .|..+++|+++|+++|++.|+.|+||+..+++++.+|+.+.. .... +..++
T Consensus 157 d~~i~~d--~~~p~~-i~~~--~--~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~--~~~~~~~~~~~ 227 (364)
T 2rb7_A 157 DYVVALD--GGNPQQ-VITK--E--KGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA--EENEDHWHRTV 227 (364)
T ss_dssp EEEEECS--SSBTTE-EEEE--E--CEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC--CCCTTCCSCEE
T ss_pred CEEEEcc--CCcccc-eEEE--e--eeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc--chhhcCCCceE
Confidence 8777654 456777 4332 1 278899999999999999999999999999999999988732 1112 35789
Q ss_pred EEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHH
Q 011407 318 SVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVK 397 (486)
Q Consensus 318 ~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~ 397 (486)
+++.|+||.+.|+||++|++++|+|++|.++.+++.++|++++++ ++++... ++ .....++++++.++
T Consensus 228 ~vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-------~v~~~~~----~~-~~~~~~~~l~~~~~ 295 (364)
T 2rb7_A 228 NLGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-------TVSIVRT----VP-VFLAADSPYTERLL 295 (364)
T ss_dssp EEEEEEECSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-------EEEEEEE----EC-CEECCCCHHHHHHH
T ss_pred EEEEEecCCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-------hEEeccC----Cc-cccCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999998753 3332111 11 12334779999999
Q ss_pred HHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 398 KVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 398 ~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
++++ .+|. ...|++|+++|++ .+|++. +||+... ..|++||+++++++..++++|+.++.+++.
T Consensus 296 ~~~~-~~g~-------~~~g~~D~~~~~~~~~p~v~--~Gp~~~~-----~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 360 (364)
T 2rb7_A 296 ALSG-ATAG-------KAHGASDARYLGENGLTGVV--WGAEGFN-----TLHSRDECLHIPSLQSIYDPLMQLAREMEE 360 (364)
T ss_dssp HHHC-CEEE-------EESSCCGGGGTGGGTCCEEE--CCCCCTT-----CTTSTTCEEETTHHHHHHHHHHHHHHHHHC
T ss_pred HHHH-hcCC-------CCCCCchHHHHHhcCCCEEE--ECCCCcc-----ccCCCCccccHHHHHHHHHHHHHHHHHHHh
Confidence 9987 4553 1578899999987 688754 7887641 259999999999999999999999999986
Q ss_pred h
Q 011407 477 E 477 (486)
Q Consensus 477 ~ 477 (486)
.
T Consensus 361 ~ 361 (364)
T 2rb7_A 361 H 361 (364)
T ss_dssp -
T ss_pred h
Confidence 4
No 19
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=4.3e-47 Score=396.67 Aligned_cols=353 Identities=15% Similarity=0.132 Sum_probs=284.4
Q ss_pred chHHHHHHHHHHhhhCCCCCC----------ChHHHHHHHHHHHHhCCCc-eEecCCCceEEEEEc-CC--CCcEEEEEe
Q 011407 95 ETVDWLKSVRRTIHQNPELAF----------QEFETSRLLRAELDRMEIG-YKYPLAKTGIRAWVG-TG--GPPFVALRA 160 (486)
Q Consensus 95 ~~~~~l~~ll~~lv~iPs~s~----------~E~~~a~~l~~~L~~~G~~-v~~~~~~~nvia~~g-~~--~~~~ill~g 160 (486)
..++++++++++|++|||+|+ +|.++++||+++|+++|++ ++.+ ...||+++++ ++ ++|+|+|+|
T Consensus 24 ~~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d-~~~nv~a~~~g~~~~~~~~v~l~~ 102 (434)
T 3ife_A 24 AMKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD-DNGYVMATLPANTDKDVPVIGFLA 102 (434)
T ss_dssp HHHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTSCEEEEECCBSSSCCCCEEEEE
T ss_pred HHHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC-CCcEEEEEeCCCCCCCCCeEEEEE
Confidence 356899999999999999998 5689999999999999997 7764 4789999994 33 268999999
Q ss_pred ccCcccCcCCCCCcccc----cCC----------------------------CeeeecCc-----h--HHHHHHHHHHHH
Q 011407 161 DMDALPIQEAVEWEYKS----KVA----------------------------GKMHACGH-----D--AHVAMLIGAAKI 201 (486)
Q Consensus 161 H~DtVP~~~~~~~p~~~----~~d----------------------------G~l~GrG~-----~--g~~a~~l~aa~~ 201 (486)
|+||||+.+ .|+++| ..| |++||||+ | ++++++|+|++.
T Consensus 103 H~DtVp~~~--~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~ 180 (434)
T 3ife_A 103 HLDTATDFT--GKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNY 180 (434)
T ss_dssp ECCBCTTSC--CSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHH
T ss_pred EcccCCCCC--CCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHH
Confidence 999999632 455544 122 59999996 3 899999999999
Q ss_pred HHhcCCCCCceEEEEeecCCCCcCcHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCC
Q 011407 202 LKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGA 281 (486)
Q Consensus 202 L~~~g~~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha 281 (486)
|++.+..++++|.|+|++|||.|.|++.+.... + ++|++++.|++ +.|.+.+ +. +|..+++|+++|+++||
T Consensus 181 L~~~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~~---~~g~i~~--~~--~G~~~~~i~v~G~~~Ha 251 (434)
T 3ife_A 181 LIHNPQIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDGG---PLGGLEY--ES--FNAAGAKLTFNGTNTHP 251 (434)
T ss_dssp HHTCTTSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCCC---STTEEEC--CB--CEEEEEEEEEECBCCCG
T ss_pred HHhCCCCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecCC---CCCceee--cC--CCeEEEEEEEEEEecCC
Confidence 999888899999999999999998888875432 3 58999998864 3355543 22 38899999999999999
Q ss_pred C-CCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHH
Q 011407 282 A-NPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVI 360 (486)
Q Consensus 282 ~-~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~ 360 (486)
| .|+.|+||+..+++++.+|+.+.... ..+.+++.+++| ..|+||++|++++++|++|.++.+++.++|++++
T Consensus 252 g~~P~~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~~g~i~~g-~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~ 325 (434)
T 3ife_A 252 GTAKNKMRNATKLAMEFNGHLPVEEAPE-----YTEGYEGFYHLL-SLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIV 325 (434)
T ss_dssp GGCTTTCBCHHHHHHHHHHTSCTTCSGG-----GCCTTCCEEEEE-EEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCcccchhHHHHHHHHHHhcccccCCC-----cceeeeEEEEee-eEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 8 69999999999999999998762111 122233445544 4799999999999999999999999999999999
Q ss_pred HHHHhhcC-ceeEEEEecCCCCCC-CCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEcc
Q 011407 361 VEQARVFR-CSATVDFFDKGNTVY-PPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGI 437 (486)
Q Consensus 361 ~~~~~~~g-~~~~v~~~~~~~~~~-~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~ 437 (486)
++.+..++ +++++++... .+++ ++..+|+++++.+++++++ +|.++ ....+.|++|+++++.. +|+++ +||
T Consensus 326 ~~~~~~~g~~~~~v~~~~~-~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~--~~~~~~ggtD~~~~~~~GiP~~~--~g~ 399 (434)
T 3ife_A 326 KQMQEKYGQDAVVLEMNDQ-YYNMLEKIEPVREIVDIAYEAMKS-LNIEP--NIHPIRGGTDGSQLSYMGLPTPN--IFT 399 (434)
T ss_dssp HHHHHHHCGGGEEEEEEEE-ECCTHHHHGGGTHHHHHHHHHHHH-TTCCC--EECCBSSCCHHHHHHHTTCCCCE--ECC
T ss_pred HHHHHhcCCceEEEEEeec-ccchhccccCCHHHHHHHHHHHHH-hCCCC--EEeecccCchHHHHhhCCCcEEE--eCC
Confidence 99888887 5666666421 0111 1346789999999999999 78765 34677899999999876 99874 577
Q ss_pred ccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 438 KNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 438 ~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
+.. .+|++||+++++++.+++++|+.++.++.++
T Consensus 400 g~~------~~H~~~E~i~~~~l~~~~~~~~~~l~~la~~ 433 (434)
T 3ife_A 400 GGE------NYHGKFEYVSVDVMEKAVQVIIEIARRFEEQ 433 (434)
T ss_dssp SEE------STTSTTCEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC------CCcCCceeecHHHHHHHHHHHHHHHHHHhhc
Confidence 653 5999999999999999999999999998753
No 20
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=3.6e-46 Score=395.36 Aligned_cols=364 Identities=13% Similarity=0.065 Sum_probs=250.8
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhhCCCCCCCh------------HHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCC
Q 011407 86 EVMELARRPETVDWLKSVRRTIHQNPELAFQE------------FETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGP 153 (486)
Q Consensus 86 ~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E------------~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~ 153 (486)
.+.+++ +++++++++++++|++|||+|++| .++++||.++|+++||+++..++ ...++++|.+ +
T Consensus 24 ~i~~~i--~~~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~~-~~~~~~~g~~-~ 99 (492)
T 3khx_A 24 MWKEKV--QQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVDH-IAGRIEAGKG-N 99 (492)
T ss_dssp TTHHHH--HTTHHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEETT-TEEEEEEECS-S
T ss_pred HHHHHH--HHhHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeCC-EEEEEEeCCC-C
Confidence 577888 889999999999999999999887 48999999999999999876532 2223334444 6
Q ss_pred cEEEEEeccCcccCcC-CCCCcccc-cCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cH
Q 011407 154 PFVALRADMDALPIQE-AVEWEYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GA 227 (486)
Q Consensus 154 ~~ill~gH~DtVP~~~-~~~~p~~~-~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~ 227 (486)
|+|+|+|||||||+++ |+..||.+ +++|++||||+ | ++++++|+|+++|++.+.+++++|.|+|++|||.|+ |+
T Consensus 100 ~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~g~ 179 (492)
T 3khx_A 100 DVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCT 179 (492)
T ss_dssp CEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTCCCCTT
T ss_pred CEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCcCH
Confidence 8999999999999865 45568887 57899999999 4 899999999999999988899999999999999997 99
Q ss_pred HHHHHcCCCccccEEEEEecCC----------------------------------------CCCcee--EEecc-C---
Q 011407 228 KRMMADGALEDVEAIFAVHVSH----------------------------------------EHPTGV--IGSRP-G--- 261 (486)
Q Consensus 228 ~~l~~~g~~~~~d~~i~~~~~~----------------------------------------~~p~g~--i~~~~-G--- 261 (486)
+.++++.. .+|+.+..+... ..|... +.... +
T Consensus 180 ~~~~~~~~--~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~ept~~~~ 257 (492)
T 3khx_A 180 DRYFKTEE--MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTD 257 (492)
T ss_dssp SHHHHHSC--CCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEECSCHHH
T ss_pred HHHHHhCc--CCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeecccchHH
Confidence 99998743 345544322100 001110 10000 0
Q ss_pred -----------cccceee-----EEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHH------hhhh---c---------
Q 011407 262 -----------PLLAGCG-----FFHAVISGKKGGAANPHRSVDPVLAASAAVISLQ------GLVS---R--------- 307 (486)
Q Consensus 262 -----------~~~ag~~-----~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~------~l~~---~--------- 307 (486)
....|.. +++|+++|+++|++.|+.|+|||..+++++.+|+ .+.. +
T Consensus 258 ~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 337 (492)
T 3khx_A 258 VIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGE 337 (492)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCTTSG
T ss_pred HHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCCCcc
Confidence 0012566 8999999999999999999999999999998886 1210 0
Q ss_pred ------ccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCC
Q 011407 308 ------EANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNT 381 (486)
Q Consensus 308 ------~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~ 381 (486)
.....+..++|++.|++|. |++|++.+|+|+++.++.+++.++|++++++ .++++++.... +
T Consensus 338 ~l~i~~~d~~~G~~t~n~g~i~~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~~----~g~~~~i~~~~---~ 405 (492)
T 3khx_A 338 KMGMKFHTDVMGDVTTNIGVITYDN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQQ----YGFEVKLGKVQ---P 405 (492)
T ss_dssp GGTCC-------CCEEEEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHGG----GTEEEEEEEEE---C
T ss_pred ccCCccccCCcCccEEeeeEEEEec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHHH----cCCEEEEeccC---C
Confidence 0112356789999999885 9999999999999999999999999998763 46666665421 1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchH
Q 011407 382 VYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLP 461 (486)
Q Consensus 382 ~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~ 461 (486)
+ .....|+++++.+++++++++|.++ .+..+.|++|++++...+|.-. ++|+.. ..+|++||+++++++.
T Consensus 406 p-~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~gggtDa~~~~~~v~~G~--~fPg~~-----~~~H~~dE~v~i~~l~ 475 (492)
T 3khx_A 406 P-HYVDKNDPFVQKLVTAYRNQTNDMT--EPYTIGGGTYARNLDKGVAFGA--MFSDSE-----DLMHQKNEYITKKQLF 475 (492)
T ss_dssp C-BCCGGGCHHHHHHHHHHHTTCC--------------------------------------------CCSCEEEHHHHH
T ss_pred c-eecCCCcHHHHHHHHHHHHHhCCCC--eEEeeehhHHHHHhhCceEECC--cCCCCC-----CCCCCCccCcCHHHHH
Confidence 1 1234588999999999999888765 3577899999999876444321 225432 4699999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 011407 462 VGAAVHATIAERFLNE 477 (486)
Q Consensus 462 ~~~~i~~~~i~~~l~~ 477 (486)
+++++|+.++.++++.
T Consensus 476 ~~~~i~~~~l~~l~~~ 491 (492)
T 3khx_A 476 NATSIYLEAIYSLCVE 491 (492)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999999864
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=1.3e-45 Score=383.58 Aligned_cols=347 Identities=16% Similarity=0.135 Sum_probs=283.6
Q ss_pred HHHHHHHHhhhCCCCCC----------ChHHHHHHHHHHHHhCCCc-eEecCCCceEEEEEcC-C--CCcEEEEEeccCc
Q 011407 99 WLKSVRRTIHQNPELAF----------QEFETSRLLRAELDRMEIG-YKYPLAKTGIRAWVGT-G--GPPFVALRADMDA 164 (486)
Q Consensus 99 ~l~~ll~~lv~iPs~s~----------~E~~~a~~l~~~L~~~G~~-v~~~~~~~nvia~~g~-~--~~~~ill~gH~Dt 164 (486)
++++++++|++|||+|+ +|.++++||+++|+++|++ ++.+ ..+|+++++++ + ++|+|+|+|||||
T Consensus 3 ~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~g~~~~~~~~i~l~aH~D~ 81 (417)
T 1fno_A 3 KLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS-EKGTLMATLPANVEGDIPAIGFISHVDT 81 (417)
T ss_dssp SHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTCCEEEEECCSSCSCCCCEEEEEECCB
T ss_pred HHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC-CCceEEEEECCCCCCCCCceEEEEeccc
Confidence 57889999999999998 6889999999999999998 7654 46899999943 3 3689999999999
Q ss_pred ccCcCC-CCCcc-----ccc-----------------------CCCeeeecC-----ch--HHHHHHHHHHHHHHhcCCC
Q 011407 165 LPIQEA-VEWEY-----KSK-----------------------VAGKMHACG-----HD--AHVAMLIGAAKILKSREHL 208 (486)
Q Consensus 165 VP~~~~-~~~p~-----~~~-----------------------~dG~l~GrG-----~~--g~~a~~l~aa~~L~~~g~~ 208 (486)
||+.+. ...|| +.. .||++|||| +| ++++++|+|++.|++.+ .
T Consensus 82 Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~ 160 (417)
T 1fno_A 82 SPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP-I 160 (417)
T ss_dssp CTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-C
T ss_pred cCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC-C
Confidence 998552 22243 221 256899999 55 89999999999999988 7
Q ss_pred CCceEEEEeecCCCCcCcHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCC-CCCCC
Q 011407 209 LKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRS 287 (486)
Q Consensus 209 l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~-~p~~G 287 (486)
++++|.|+|+++||.|.|++.+.++++ ++|++++.++. +.+.+.+ + ..|..+++|+++|+++|++ .|+.|
T Consensus 161 ~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~~---~~g~i~~--~--~~g~~~~~i~~~G~~~Hs~~~p~~g 231 (417)
T 1fno_A 161 PHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDGG---GVGELEF--E--NFNAASVNIKIVGNNVHPGTAKGVM 231 (417)
T ss_dssp CCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCCC---STTBEEC--C--BCEEEEEEEEEECBCCCGGGCTTTC
T ss_pred CCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCCC---CcCeeEE--e--cCCceeEEEEEEeeccCCCCCcccc
Confidence 889999999999998888887765442 57888887754 3455433 2 2388899999999999999 59999
Q ss_pred CcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhc
Q 011407 288 VDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVF 367 (486)
Q Consensus 288 ~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~ 367 (486)
+||+..+++++.+|+.+..+........+++++.++|| |++|++.+|+|+.|.++.+++.++|++++++.+..+
T Consensus 232 ~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG------p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~ 305 (417)
T 1fno_A 232 VNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT------VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKGL 305 (417)
T ss_dssp BCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec------cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999887544333334567999999988 999999999999999999999999999999988777
Q ss_pred Cce--eEEEEecCCCCCCCC----CCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhh-cCccEEEEccccC
Q 011407 368 RCS--ATVDFFDKGNTVYPP----TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNE 440 (486)
Q Consensus 368 g~~--~~v~~~~~~~~~~~~----~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~ 440 (486)
+.. +++++.. .+++ ..+++++++.+++++++ +|.++. ...+.|++|+++++.. +|++. +||+..
T Consensus 306 ~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~~--~~~~~ggtD~~~~~~~gip~v~--~G~~~~ 376 (417)
T 1fno_A 306 HPDCYIELVIED----SYYNMREKVVEHPHILDIAQQAMRD-CHITPE--MKPIRGGTDGAQLSFMGLPCPN--LFTGGY 376 (417)
T ss_dssp CTTCCEEEEEEE----EECCCHHHHHTSTHHHHHHHHHHHH-TTCCCB--CCCBSSCCHHHHHTTTTCCCCE--ECCSEE
T ss_pred CCCceEEEEEec----cccchhccccCCCHHHHHHHHHHHH-cCCCce--eccceeccchHhHHhcCCCEEE--EcCCCC
Confidence 643 6666542 2222 35789999999999999 687653 4677899999999874 89874 688753
Q ss_pred CCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 441 TLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 441 ~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
.+|+++|+++++++.+++++|+.++.+++..
T Consensus 377 ------~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~ 407 (417)
T 1fno_A 377 ------NYHGKHEFVTLEGMEKAVQVIVRIAELTAKR 407 (417)
T ss_dssp ------STTSTTCEEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------CCCCcccccCHHHHHHHHHHHHHHHHHHHhc
Confidence 4999999999999999999999999999874
No 22
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=1.4e-44 Score=383.04 Aligned_cols=350 Identities=15% Similarity=0.140 Sum_probs=276.6
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC--C--CCcEEEEEeccCcccCcCC-
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT--G--GPPFVALRADMDALPIQEA- 170 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~--~--~~~~ill~gH~DtVP~~~~- 170 (486)
..+++++++++|++|||+|++|.++++||+++|+++|++++.+. .+|+++++++ + ++|+|+|+|||||||.++.
T Consensus 9 ~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~ 87 (487)
T 2qyv_A 9 QPKLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE-VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEG 87 (487)
T ss_dssp SSHHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTBCCEEEEEESCBCCC----
T ss_pred CHHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCC
Confidence 35789999999999999999999999999999999999987643 5799999953 2 3589999999999998643
Q ss_pred -----CCCccccc-CCCeeeecCc----h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCc
Q 011407 171 -----VEWEYKSK-VAGKMHACGH----D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALE 237 (486)
Q Consensus 171 -----~~~p~~~~-~dG~l~GrG~----~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~ 237 (486)
+..||.+. ++|++||||+ | ++++++|.+++ +.+ .++++|.|+|+++||.|+ |++.+++++ +
T Consensus 88 ~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~---~~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~- 161 (487)
T 2qyv_A 88 TNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLE---SND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L- 161 (487)
T ss_dssp ------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHH---CSS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C-
T ss_pred CccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHH---hCC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c-
Confidence 44577774 6899999999 5 66777776664 333 478999999999999986 999988865 4
Q ss_pred cccEEEEEecCCCCCceeEE--eccC------------cccceeeEEEEEEEe-ecCCCCCC-CCC-CcHHHHHHHHHHH
Q 011407 238 DVEAIFAVHVSHEHPTGVIG--SRPG------------PLLAGCGFFHAVISG-KKGGAANP-HRS-VDPVLAASAAVIS 300 (486)
Q Consensus 238 ~~d~~i~~~~~~~~p~g~i~--~~~G------------~~~ag~~~~~i~v~G-~~~Ha~~p-~~G-~nAi~~a~~~i~~ 300 (486)
++|+++..+++. .+.+. .+.| ...+| .+++|+++| +++|||.| +.| .||+..+++++.+
T Consensus 162 ~~d~~~~~d~~~---~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~ 237 (487)
T 2qyv_A 162 RSEILINTDTEE---NGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAE 237 (487)
T ss_dssp CCSEEEECCCCC---TTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHH
T ss_pred CCCEEEEEccCC---CCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHH
Confidence 489998877643 23332 1111 11234 789999999 89999985 776 7999999999999
Q ss_pred HHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEE---------------------------------------
Q 011407 301 LQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTL--------------------------------------- 341 (486)
Q Consensus 301 L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~di--------------------------------------- 341 (486)
|+.+. ...+++++.|+||.+.|+||++|++.+++
T Consensus 238 l~~~~-------~~~~~~v~~i~gG~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (487)
T 2qyv_A 238 LQQNQ-------PHFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKP 310 (487)
T ss_dssp HHHHC-------TTCCEEEEEEEEESCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCC
T ss_pred Hhhcc-------CCCcEEEEEEeCCCcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccc
Confidence 98873 13568999999999999999999999999
Q ss_pred -eCCChhhHHHHHHHHHHH---------------------------------------------------HHHHHhhcCc
Q 011407 342 -RAFSNTSFYQLLQRIEEV---------------------------------------------------IVEQARVFRC 369 (486)
Q Consensus 342 -R~~p~~~~~~v~~~i~~~---------------------------------------------------~~~~~~~~g~ 369 (486)
|++|.++.+++.+.|+++ +++.+..+|+
T Consensus 311 ~r~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~ 390 (487)
T 2qyv_A 311 QQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQG 390 (487)
T ss_dssp SEEECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccCHHHHHHHHHHHHhCCCcceeeccccCCceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCc
Confidence 899999999888888775 3445666777
Q ss_pred eeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCcc-EEEEccccCCCCCCCCC
Q 011407 370 SATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAA-FYYIGIKNETLGSIHTG 448 (486)
Q Consensus 370 ~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~~~~~~~~ 448 (486)
++++.... +++ ...+|+++++.+.+++++++|.++. +..+.|++|+++|...+|.+ ++.+||+. ..+
T Consensus 391 ~~~~~~~~---p~~-~~~~d~~l~~~~~~~~~~~~G~~~~--~~~~~gg~D~~~~~~~~pg~~~v~~Gp~~------~~~ 458 (487)
T 2qyv_A 391 NINLSGDY---PGW-EPQSHSDILDLTKTIYAQVLGTDPE--IKVIHAGLECGLLKKIYPTIDMVSIGPTI------RNA 458 (487)
T ss_dssp EEEEEEEE---CCB-CCCSCCHHHHHHHHHHHHHHSSCCE--EEEESSCCTHHHHHHHCTTSEEEECCCCE------EST
T ss_pred eEEECCCC---CCC-CCCCCCHHHHHHHHHHHHHhCCCCe--EEEEeccccHHHHHhhCCCCCEEEECCCC------CCC
Confidence 77665321 222 2335899999999999998898753 45778999999998876643 45678854 359
Q ss_pred CCCCCcCCCCchHHHHHHHHHHHHHHH
Q 011407 449 HSPYFMIDEDVLPVGAAVHATIAERFL 475 (486)
Q Consensus 449 H~~dE~i~i~~l~~~~~i~~~~i~~~l 475 (486)
|++||+++++++.+++++|+.++.+++
T Consensus 459 H~~~E~v~~~~l~~~~~~~~~~l~~l~ 485 (487)
T 2qyv_A 459 HSPDEKVHIPAVETYWKVLTGILAHIP 485 (487)
T ss_dssp TSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998875
No 23
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=1.5e-44 Score=376.02 Aligned_cols=348 Identities=14% Similarity=0.135 Sum_probs=284.1
Q ss_pred cchHHHHHHHHHHhhhCCCCC----------CChHHHHHHHHHHHHhCCCceEecCCCceEEEEEc-CCC-CcEEEEEec
Q 011407 94 PETVDWLKSVRRTIHQNPELA----------FQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG-TGG-PPFVALRAD 161 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s----------~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g-~~~-~~~ill~gH 161 (486)
+...+++++++++|++|||++ ++|.++++||.++|+++|++++.+. ..|+++++. +++ +|+|+|++|
T Consensus 5 ~~~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~-~gnv~a~~~g~~~~~~~i~l~~H 83 (423)
T 1z2l_A 5 THFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDE-VGNLYGRLNGTEYPQEVVLSGSH 83 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECT-TSCEEEEECCSSEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEec-CCcEEEEEcCCCCCCCEEEEEEe
Confidence 566789999999999999988 6789999999999999999987643 359999994 433 389999999
Q ss_pred cCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC------cHHHHHH---
Q 011407 162 MDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN------GAKRMMA--- 232 (486)
Q Consensus 162 ~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~------G~~~l~~--- 232 (486)
|||||.+. | .||+ ++++++|+++++|++.+.+++++|.|+|+++||.++ |++.+..
T Consensus 84 ~D~Vp~~g---~-----~D~k-------~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~ 148 (423)
T 1z2l_A 84 IDTVVNGG---N-----LDGQ-------FGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLAN 148 (423)
T ss_dssp CCCCTTBC---S-----STTH-------HHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCC
T ss_pred cCCCCCCC---c-----cCCH-------HHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCC
Confidence 99999642 1 1222 578899999999999888899999999999999852 7777765
Q ss_pred -c--------------------CCC---------ccccEEEEEecCCC-------CCceeEEeccCcccceeeEEEEEEE
Q 011407 233 -D--------------------GAL---------EDVEAIFAVHVSHE-------HPTGVIGSRPGPLLAGCGFFHAVIS 275 (486)
Q Consensus 233 -~--------------------g~~---------~~~d~~i~~~~~~~-------~p~g~i~~~~G~~~ag~~~~~i~v~ 275 (486)
+ |.. .++|+++.+|..++ .+.+.+. + ..|..+++|+++
T Consensus 149 ~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~~---~--~~g~~~~~i~v~ 223 (423)
T 1z2l_A 149 PDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVN---A--IVGQRRYTVTLN 223 (423)
T ss_dssp GGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEEE---E--ECEEEEEEEEEE
T ss_pred HHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEEe---e--EecceEEEEEEE
Confidence 2 221 14677887776543 1223221 2 237889999999
Q ss_pred eecCCCC-CCC-CCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHH
Q 011407 276 GKKGGAA-NPH-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQL 352 (486)
Q Consensus 276 G~~~Ha~-~p~-~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v 352 (486)
|+++||+ .|+ .|+||+..+++++..|+++..+. .+ ..+++++.|+|| .+.|+||++|++.+|+|++|.++.+++
T Consensus 224 G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~-~~--~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i 300 (423)
T 1z2l_A 224 GESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRM-GD--PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDF 300 (423)
T ss_dssp CCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH-CT--TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHH
T ss_pred eEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHhc-CC--CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHH
Confidence 9999999 595 89999999999999999876542 22 468899999987 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccE
Q 011407 353 LQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAF 432 (486)
Q Consensus 353 ~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~ 432 (486)
.++|++++++.+..++++++++.. ..++++.+|+++++.++++++++ |.++ .+..+.|++|+++|+..+|+++
T Consensus 301 ~~~i~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~-g~~~--~~~~~~ggtD~~~~~~~~p~~~ 373 (423)
T 1z2l_A 301 TQQLENDMRAICDEMDIGIDIDLW----MDEEPVPMNKELVATLTELCERE-KLNY--RVMHSGAGHDAQIFAPRVPTCM 373 (423)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEE----EEECCEECCHHHHHHHHHHHHHT-TCCE--EEEEESSCCTHHHHTTTSCEEE
T ss_pred HHHHHHHHHHHHHHhCCeEEEEEe----cCCCCccCCHHHHHHHHHHHHHc-CCCe--EEecCCCcccHHHHHhhCCEEE
Confidence 999999999988888888888765 24566777999999999999996 8764 2456789999999988899876
Q ss_pred EEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhc
Q 011407 433 YYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 478 (486)
Q Consensus 433 ~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~ 478 (486)
. +||+.. ..+|++||+++++++.+++++|+.++.+++.+.
T Consensus 374 ~-~~p~~~-----~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 413 (423)
T 1z2l_A 374 I-FIPSIN-----GISHNPAERTNITDLAEGVKTLALMLYQLAWQK 413 (423)
T ss_dssp E-EECCGG-----GCCSSTTCCCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred E-EeCCCC-----CCCCCccccCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 5 455432 259999999999999999999999999999864
No 24
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=9.6e-44 Score=368.40 Aligned_cols=342 Identities=17% Similarity=0.216 Sum_probs=282.0
Q ss_pred HHHHHHHHHHhhhCCCC----------CCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEc-CCC-CcEEEEEeccCc
Q 011407 97 VDWLKSVRRTIHQNPEL----------AFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG-TGG-PPFVALRADMDA 164 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~----------s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g-~~~-~~~ill~gH~Dt 164 (486)
.+++++++++|++||+. |++|.++++||.++|+++|++++.+. ..|++++++ +++ +|+|+|.+||||
T Consensus 4 ~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~-~gnv~a~~~g~~~~~~~i~l~aH~D~ 82 (408)
T 3n5f_A 4 GERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA-AGNLIGRKEGTNPDATVVLVGSHLDS 82 (408)
T ss_dssp HHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECT-TCCEEEEECCSSTTSCEEEEEEESCC
T ss_pred HHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcC-CCCEEEEecCCCCCCCEEEEEecCCC
Confidence 57889999999999993 78999999999999999999998753 459999994 443 699999999999
Q ss_pred ccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc-----C-cHHHHH-------
Q 011407 165 LPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG-----N-GAKRMM------- 231 (486)
Q Consensus 165 VP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g-----~-G~~~l~------- 231 (486)
||.+.. | |++ ++++++|.+++.|++.+.+++++|.|+|+++||.+ . |++.++
T Consensus 83 v~~~g~----~----d~~-------~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~ 147 (408)
T 3n5f_A 83 VYNGGC----F----DGP-------LGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEA 147 (408)
T ss_dssp CTTBCS----S----TTH-------HHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGG
T ss_pred CCCCCc----c----CCH-------HHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHH
Confidence 996310 0 111 56889999999999998889999999999999973 2 888886
Q ss_pred -----Hc-----------CC----C-----c--cccEEEEEecCCC-------CCceeEEeccCcccceeeEEEEEEEee
Q 011407 232 -----AD-----------GA----L-----E--DVEAIFAVHVSHE-------HPTGVIGSRPGPLLAGCGFFHAVISGK 277 (486)
Q Consensus 232 -----~~-----------g~----~-----~--~~d~~i~~~~~~~-------~p~g~i~~~~G~~~ag~~~~~i~v~G~ 277 (486)
++ |+ + + ++|+++.+|..++ .+.+.+. + .+|..+++|+++|+
T Consensus 148 ~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~---~--~~g~~~~~i~v~G~ 222 (408)
T 3n5f_A 148 LECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVT---G--IAGLIWVKFTIEGK 222 (408)
T ss_dssp GSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEE---E--ECEEEEEEEEEECC
T ss_pred hhccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEE---E--eccceEEEEEEEEE
Confidence 22 22 1 2 5688888886543 2333322 2 23889999999999
Q ss_pred cCCCC-CC-CCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChhhHHHHHH
Q 011407 278 KGGAA-NP-HRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQ 354 (486)
Q Consensus 278 ~~Ha~-~p-~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~~~~~v~~ 354 (486)
++|++ .| +.|+||+..+++++.+|+.+. +... ..+++++.|+|| .+.|+||++|++.+++|+.|.++.+++.+
T Consensus 223 ~~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~---~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~ 298 (408)
T 3n5f_A 223 AEHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG---TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWK 298 (408)
T ss_dssp CEETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS---SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHH
T ss_pred cCcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC---CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHH
Confidence 99995 69 589999999999999999886 3222 578999999997 89999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEE
Q 011407 355 RIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYY 434 (486)
Q Consensus 355 ~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~ 434 (486)
+|++++++.+..+|+++++++. ..++++.+|+++++.++++++++ |.+.. .....|++|+++|++.+|+++++
T Consensus 299 ~i~~~~~~~a~~~g~~~~i~~~----~~~p~~~~d~~l~~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~iP~~~~~ 371 (408)
T 3n5f_A 299 AIAVRAETIAKERNVRVTTERL----QEMPPVLCSDEVKRAAEAACQKL-GYPSF--WLPSGAAHDSVQLAPICPIGMIF 371 (408)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEE----EEECCEECCHHHHHHHHHHHHHH-TCCCC--EEEESSCCTTTTTTTTSCEEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEEEe----cCCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCCcCchHHHHHHHHCCEEEEE
Confidence 9999999988888999988876 35667778999999999999996 87542 34567899999998889997766
Q ss_pred EccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 435 IGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 435 ~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+|.... .+|+++|+++++++..++++|+.++.++.+
T Consensus 372 ~~~~~~------~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 407 (408)
T 3n5f_A 372 VRSQDG------VSHSPAEWSTKEDCAAGAEVLYHTVWQLAQ 407 (408)
T ss_dssp ECCGGG------CCSSTTCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred eCCCCC------CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 665432 499999999999999999999999988753
No 25
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=2.3e-44 Score=379.96 Aligned_cols=351 Identities=15% Similarity=0.118 Sum_probs=282.9
Q ss_pred hHHHHHHHHHHh-hhCCCC-----------------CCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEc-CCCCcEE
Q 011407 96 TVDWLKSVRRTI-HQNPEL-----------------AFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG-TGGPPFV 156 (486)
Q Consensus 96 ~~~~l~~ll~~l-v~iPs~-----------------s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g-~~~~~~i 156 (486)
..+++++++++| ++|||+ +++|.++++||.++|+++|++++.+ ...|++++++ .+++|+|
T Consensus 30 ~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d-~~gnvia~~~g~~~~~~i 108 (474)
T 2v8h_A 30 ASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD-KIGNMFAVYPGKNGGKPT 108 (474)
T ss_dssp CTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB-TTCCEEEEECCSSCCSCE
T ss_pred CHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe-cCceEEEEECCCCCCCeE
Confidence 467899999999 999987 3678999999999999999998764 3468999994 4445799
Q ss_pred EEEeccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc-----C-cHHHH
Q 011407 157 ALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG-----N-GAKRM 230 (486)
Q Consensus 157 ll~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g-----~-G~~~l 230 (486)
+|+|||||||+++ | | |++ ++++++|+|+++|++.+.+++++|.|+|+++||++ . |++.+
T Consensus 109 ~l~~H~DtVp~~g---~-~----D~k-------~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l 173 (474)
T 2v8h_A 109 ATGSHLDTQPEAG---K-Y----DGI-------LGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVW 173 (474)
T ss_dssp EEEECCCCCSSBC---S-S----TTH-------HHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHH
T ss_pred EEEEecccCCCCC---C-c----CCH-------HHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHH
Confidence 9999999999753 2 1 222 68899999999999999889999999999999983 2 77777
Q ss_pred HH---------------------------cCCC---------ccccEEEEEecCCCCCc---e-eEEeccCcccceeeEE
Q 011407 231 MA---------------------------DGAL---------EDVEAIFAVHVSHEHPT---G-VIGSRPGPLLAGCGFF 270 (486)
Q Consensus 231 ~~---------------------------~g~~---------~~~d~~i~~~~~~~~p~---g-~i~~~~G~~~ag~~~~ 270 (486)
.+ .|+. .++|+.+.+|..++... + ...+..+. .|..++
T Consensus 174 ~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~--~G~~~~ 251 (474)
T 2v8h_A 174 SHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGV--QAYNWQ 251 (474)
T ss_dssp TTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEEEEE--CEEEEE
T ss_pred HhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcceeEEee--cceEEE
Confidence 53 1221 35677888775443110 0 11111121 278899
Q ss_pred EEEEEeecCCCCC-CC-CCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecC-ccCccccCeEEEEEEEeCCChh
Q 011407 271 HAVISGKKGGAAN-PH-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNT 347 (486)
Q Consensus 271 ~i~v~G~~~Ha~~-p~-~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~ 347 (486)
+|+++|+++|||. |+ .|+||+..+++++.+|+.+..+. ..+++++.|+|| .+.|+||++|++.+++|++|.+
T Consensus 252 ~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~ 326 (474)
T 2v8h_A 252 KVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDD 326 (474)
T ss_dssp EEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHH
T ss_pred EEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChH
Confidence 9999999999995 98 89999999999999998875442 468999999998 8999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhh---cCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcC-C-CcccccCCCcccchHH
Q 011407 348 SFYQLLQRIEEVIVEQARV---FRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLG-P-MNYRVVPPMMGAEDFS 422 (486)
Q Consensus 348 ~~~~v~~~i~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G-~-~~~~~~~~~~g~tD~~ 422 (486)
+.+++.++|++++++.+.. .+++++++.. ..++++.+++++++.++++++++ | . ++ .+..+.|++|++
T Consensus 327 ~~~~i~~~i~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~d~~l~~~~~~a~~~~-G~~~~~--~~~~~~ggtD~~ 399 (474)
T 2v8h_A 327 VLATMLKEAAAEFDRLIKINDGGALSYESETL----QVSPAVNFHEVCIECVSRSAFAQ-FKKDQV--RQIWSGAGHDSC 399 (474)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCCCEEEEEEE----EEECCEECCHHHHHHHHHHHHHH-SCGGGE--EEEEESSCCTHH
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCcEEEEEEe----cCCCCccCCHHHHHHHHHHHHHc-CCCCcc--eecCCcCCccHH
Confidence 9999999999999987766 7888887765 24566677999999999999997 8 5 44 245678999999
Q ss_pred HHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh-ccccc
Q 011407 423 FYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE-YGQGW 482 (486)
Q Consensus 423 ~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~-~~~~~ 482 (486)
+|++.+|+++. +||+.. ..+|++||+++++++.+++++|+.++.+++.. ..+.|
T Consensus 400 ~~~~~~P~~~~-fgp~~~-----~~~H~p~E~i~~~~l~~~~~~~~~~l~~l~~~~~~~~~ 454 (474)
T 2v8h_A 400 QTAPHVPTSMI-FIPSKD-----GLSHNYYEYSSPEEIENGFKVLLQAIINYDNYRVIRGH 454 (474)
T ss_dssp HHTTTSCEEEE-EECCGG-----GCCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCCEEEE-EeCCCC-----CCCCCccccCCHHHHHHHHHHHHHHHHHHHHhHHHhhc
Confidence 99888998654 455532 35999999999999999999999999999874 35555
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=6e-44 Score=378.04 Aligned_cols=349 Identities=15% Similarity=0.137 Sum_probs=269.8
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC--C--CCcEEEEEeccCcccCcCC-
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT--G--GPPFVALRADMDALPIQEA- 170 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~--~--~~~~ill~gH~DtVP~~~~- 170 (486)
..+++++++++|++|||+|++|.++++||.++|+++|++++.+ ...|+++++++ + ++|+|+|+|||||||+++.
T Consensus 12 ~~~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~-~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~ 90 (490)
T 3mru_A 12 SPAPLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRD-PTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNED 90 (490)
T ss_dssp SSHHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEEC-TTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTT
T ss_pred CHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEc-CCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCC
Confidence 4678999999999999999999999999999999999998764 35799999943 2 4689999999999998653
Q ss_pred -----CCCcccc-cCCCeeeecCc----h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCc
Q 011407 171 -----VEWEYKS-KVAGKMHACGH----D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALE 237 (486)
Q Consensus 171 -----~~~p~~~-~~dG~l~GrG~----~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~ 237 (486)
+..||.+ .++|++||||+ | ++++++|+++ ++ ...++++|.|+|++|||.|. |++.+++.. +
T Consensus 91 ~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~-~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~- 164 (490)
T 3mru_A 91 TDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---AS-KEIKHGPIEVLLTIDEEAGMTGAFGLEAGW-L- 164 (490)
T ss_dssp SCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HC-SSCCCCSEEEEEESCSSSTTGGGGTCCSSS-C-
T ss_pred cccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---Hh-CCCCCCCEEEEEEcccccccHhHHHhhhcc-c-
Confidence 3346666 46899999999 5 4566666543 33 34568999999999999986 999988753 3
Q ss_pred cccEEEEEecCCC--CCceeEE-------e--ccCcccceeeEEEEEEEe-ecCCCCC-CCCCC-cHHHHHHHHHHHHHh
Q 011407 238 DVEAIFAVHVSHE--HPTGVIG-------S--RPGPLLAGCGFFHAVISG-KKGGAAN-PHRSV-DPVLAASAAVISLQG 303 (486)
Q Consensus 238 ~~d~~i~~~~~~~--~p~g~i~-------~--~~G~~~ag~~~~~i~v~G-~~~Ha~~-p~~G~-nAi~~a~~~i~~L~~ 303 (486)
+.|+++..|+... ...|+.+ . ......+|..+++|+++| +++|++. |+.|+ ||+..+++++..|++
T Consensus 165 ~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~ 244 (490)
T 3mru_A 165 KGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQ 244 (490)
T ss_dssp CSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTT
T ss_pred CCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHh
Confidence 5788888775321 1111110 0 001223478899999999 9999996 99999 999999999999986
Q ss_pred hhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhh-----------------
Q 011407 304 LVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARV----------------- 366 (486)
Q Consensus 304 l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~----------------- 366 (486)
. .+++++.|+||.+.|+||++|++.+++|..+.+..+++.+++.+.++.....
T Consensus 245 ~----------~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 314 (490)
T 3mru_A 245 E----------LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQ 314 (490)
T ss_dssp T----------TTCEEEEEEECSCTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCCC
T ss_pred c----------CcEEEEEEECCCCCcccCCccEEEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCccc
Confidence 2 2478999999999999999999999999877777766666666655543322
Q ss_pred ---------------------------------------------------------------------------cCcee
Q 011407 367 ---------------------------------------------------------------------------FRCSA 371 (486)
Q Consensus 367 ---------------------------------------------------------------------------~g~~~ 371 (486)
.|.++
T Consensus 315 ~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~ 394 (490)
T 3mru_A 315 VFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQI 394 (490)
T ss_dssp EECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEE
T ss_pred cCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeE
Confidence 23333
Q ss_pred EEEEecCCCCCCCCC--CCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCcc-EEEEccccCCCCCCCCC
Q 011407 372 TVDFFDKGNTVYPPT--VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAA-FYYIGIKNETLGSIHTG 448 (486)
Q Consensus 372 ~v~~~~~~~~~~~~~--~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~~~~~~~~ 448 (486)
++.. .||++ ..|+++++.+.+++++++|.++ ....+.|++|++.|.+.+|.+ ...+||+.. ++
T Consensus 395 ~~~~------~~p~~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~ggg~d~~~~~~~~p~~~~v~fGp~~~------~~ 460 (490)
T 3mru_A 395 EFSG------AYPGWKPDADSEIMAIFRDMYEGIYGHKP--NIMVIHAGLECGLFKEPYPNMDMVSFGPTIK------FP 460 (490)
T ss_dssp EEEE------EECCBCCCTTCHHHHHHHHHHHTTSSSCC--CCEEESSCCHHHHTTSSCTTCEEEECCCCEE------ST
T ss_pred EecC------CCCCCCCCCCCHHHHHHHHHHHHHHCCCC--eEEEEEecHHHHHHHHhCCCCCEEEECCCCC------CC
Confidence 3221 23333 4588999999999999889876 356788999999998877752 446798764 49
Q ss_pred CCCCCcCCCCchHHHHHHHHHHHHHHH
Q 011407 449 HSPYFMIDEDVLPVGAAVHATIAERFL 475 (486)
Q Consensus 449 H~~dE~i~i~~l~~~~~i~~~~i~~~l 475 (486)
|++||+++++++.+++++|..++.++.
T Consensus 461 H~p~E~v~i~~l~~~~~~l~~~l~~l~ 487 (490)
T 3mru_A 461 HSPDEKVKIDTVQLFWDQMVALLEAIP 487 (490)
T ss_dssp TSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999988763
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.4e-43 Score=373.66 Aligned_cols=362 Identities=14% Similarity=0.094 Sum_probs=275.0
Q ss_pred HHHHhcCcchHHHHHHHHHHhhhCCCCCCCh------------HHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCc
Q 011407 87 VMELARRPETVDWLKSVRRTIHQNPELAFQE------------FETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPP 154 (486)
Q Consensus 87 i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E------------~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~ 154 (486)
+.+++ +++++++++++++|++|||+|++| .++++||.++|+++|++++.. +..++++.+|.+ +|
T Consensus 5 ~~~~~--~~~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g~~-~~ 80 (470)
T 1lfw_A 5 FKELA--EAKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFGAG-DK 80 (470)
T ss_dssp HHHHH--HTTHHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEECCC-SS
T ss_pred HHHHH--HHhHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeCCC-CC
Confidence 56777 788999999999999999999876 789999999999999998764 346788888544 68
Q ss_pred EEEEEeccCcccCcC-CCCCccccc--CCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cH
Q 011407 155 FVALRADMDALPIQE-AVEWEYKSK--VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GA 227 (486)
Q Consensus 155 ~ill~gH~DtVP~~~-~~~~p~~~~--~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~ 227 (486)
+|+|+|||||||+++ |+..||.+. ++|++||||+ | ++++++|+|++.|++.+.+++++|.|+|+++||+|+ |+
T Consensus 81 ~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~G~ 160 (470)
T 1lfw_A 81 RLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGI 160 (470)
T ss_dssp EEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCHHH
T ss_pred eEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCccH
Confidence 999999999999876 566789885 6999999995 5 899999999999999988899999999999999987 99
Q ss_pred HHHHHcCCCc----cccE---EEEEecCC--------CCC-cee---EEeccCc--------------------------
Q 011407 228 KRMMADGALE----DVEA---IFAVHVSH--------EHP-TGV---IGSRPGP-------------------------- 262 (486)
Q Consensus 228 ~~l~~~g~~~----~~d~---~i~~~~~~--------~~p-~g~---i~~~~G~-------------------------- 262 (486)
+.+++++... .+|. ++..+.+. +.+ .|. .....|.
T Consensus 161 ~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~ 240 (470)
T 1lfw_A 161 DYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYE 240 (470)
T ss_dssp HHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHH
T ss_pred HHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHH
Confidence 9998875431 1233 11111100 000 000 0000000
Q ss_pred ------cccee-----eEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHH------hhh---hcc--------------
Q 011407 263 ------LLAGC-----GFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQ------GLV---SRE-------------- 308 (486)
Q Consensus 263 ------~~ag~-----~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~------~l~---~~~-------------- 308 (486)
...|. .+++|+++|+++|++.|+.|+||+..+++++..|+ .+. .+.
T Consensus 241 ~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 320 (470)
T 1lfw_A 241 SFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFH 320 (470)
T ss_dssp HHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCC
T ss_pred HHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCCcc
Confidence 00133 37999999999999999999999999999998875 221 111
Q ss_pred cC-CCCCeEEEEEEEecCccCccccCe-EEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCC
Q 011407 309 AN-PLDSQVVSVTYFNGGDHLDMIPDA-VVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPT 386 (486)
Q Consensus 309 ~~-~~~~~~~~v~~i~gG~~~nvIP~~-a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 386 (486)
.. ..+..+++++.+++ +|++ |++++++|++|.++.+++.++|+++++. +++ +++. ..+++.
T Consensus 321 ~~~~~~~~t~~~g~i~~------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g~~--v~~~----~~~~~~ 383 (470)
T 1lfw_A 321 HDDLMGDLASSPSMFDY------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----ILD--VTYN----GFEEPH 383 (470)
T ss_dssp EETTTEECEEEEEEEEE------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----TEE--EECS----CCBCCE
T ss_pred cccccccceEEEEEEEE------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----CeE--EEEE----eCCCce
Confidence 00 01335778887764 6999 9999999999999999999999999864 444 4443 234443
Q ss_pred --CCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHH
Q 011407 387 --VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGA 464 (486)
Q Consensus 387 --~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~ 464 (486)
.+|+++++.+.+++++++|.++. +..+.|++|++++. |++ .+||+.++ ....+|++||+++++++.+++
T Consensus 384 ~~~~d~~l~~~~~~a~~~~~g~~~~--~~~~~g~~d~~~~~---~~v--~~G~~~pg--~~~~~H~~~E~i~~~~l~~~~ 454 (470)
T 1lfw_A 384 YVPGSDPMVQTLLKVYEKQTGKPGH--EVVIGGGTYGRLFE---RGV--AFGAQPEN--GPMVMHAANEFMMLDDLILSI 454 (470)
T ss_dssp ECCTTCHHHHHHHHHHHHHHCCCCC--EEEESSCCGGGGST---TCE--ECCEECTT--CCCCTTSTTCEEEHHHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHHHcCCCCc--eeeecCHhHHHhCC---CeE--EECCCCCC--CCCCCCCCCcceEHHHHHHHH
Confidence 45899999999999998897653 35567889998874 553 46765321 124699999999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 011407 465 AVHATIAERFLNEY 478 (486)
Q Consensus 465 ~i~~~~i~~~l~~~ 478 (486)
++|+.++.+++.++
T Consensus 455 ~~~~~~~~~l~~~~ 468 (470)
T 1lfw_A 455 AIYAEAIYELTKDE 468 (470)
T ss_dssp HHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999998764
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=100.00 E-value=2.9e-32 Score=266.45 Aligned_cols=251 Identities=15% Similarity=0.175 Sum_probs=195.7
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEec--CCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCC-
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--LAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEW- 173 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~- 173 (486)
.+++++++++|++|||+|++|.++++||+++|+++|++++.. .+++|+++++|++ +|+|+|+|||||||+++.+.|
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~~-~~~i~l~~H~D~vp~~~~~~w~ 83 (268)
T 3t68_A 5 DSPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGTQ-SPLFVFAGHTDVVPAGPLSQWH 83 (268)
T ss_dssp CCHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEECSS-SCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeCCC-CCeEEEEccccccCCCCcccCC
Confidence 468899999999999999999999999999999999998753 3468999998544 689999999999998775555
Q ss_pred --cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcC--CCccccEEE
Q 011407 174 --EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADG--ALEDVEAIF 243 (486)
Q Consensus 174 --p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g--~~~~~d~~i 243 (486)
||.+ +++|++||||+. +++++++.|++.|++.+.+++++|.|+|+++||.|+ |++.+++.. ...++|++|
T Consensus 84 ~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i 163 (268)
T 3t68_A 84 TPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCI 163 (268)
T ss_dssp SCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEE
Confidence 7776 578999999995 889999999999998887889999999999999986 999888642 123689999
Q ss_pred EEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEe
Q 011407 244 AVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFN 323 (486)
Q Consensus 244 ~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~ 323 (486)
+.+++.....+. .+.+ |+.+.
T Consensus 164 ~~ept~~~~~~~-------------~i~~---g~~G~------------------------------------------- 184 (268)
T 3t68_A 164 VGEPSSTLAVGD-------------VVKN---GRRGG------------------------------------------- 184 (268)
T ss_dssp ECSCCBSSSTTS-------------EEEE---CCGGG-------------------------------------------
T ss_pred EeCCCCCccCCc-------------eeEE---ecCCC-------------------------------------------
Confidence 888753221111 0111 11110
Q ss_pred cCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 011407 324 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDL 403 (486)
Q Consensus 324 gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~ 403 (486)
|...+++++++.+.+++++.
T Consensus 185 ------------------------------------------------------------p~~~~~~~l~~~l~~a~~~~ 204 (268)
T 3t68_A 185 ------------------------------------------------------------GFLTDTGELLAAVVAAVEEV 204 (268)
T ss_dssp ------------------------------------------------------------GTSCCCCHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------cccCCchHHHHHHHHHHHHH
Confidence 01123457999999999986
Q ss_pred cCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 404 LGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 404 ~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
+|.++. .....|++|++++++..|.. ..+|++.. ..|+++|+++++++.++++++..++.++++
T Consensus 205 ~gi~~~--~~~sgggtD~~~~~~~g~p~-~~~~~~~~------~~Hs~~E~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 205 NHQAPA--LLTTGGTSDGRFIAQMGAQV-VELGPVNA------TIHKVNECVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp HSSCCE--EESSCCCHHHHHHHHHTCEE-EECCSBCT------TTTSTTCEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCcE--EecCccccHHHHHHhcCCCE-EEEeeCCC------CCCCccccccHHHHHHHHHHHHHHHHHHhC
Confidence 688764 34567899999998764432 34677654 479999999999999999999999999874
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.97 E-value=5.4e-31 Score=257.58 Aligned_cols=252 Identities=17% Similarity=0.242 Sum_probs=192.9
Q ss_pred chHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC--CCceEEEEEcCCCCcEEEEEeccCcccCcCCCC
Q 011407 95 ETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL--AKTGIRAWVGTGGPPFVALRADMDALPIQEAVE 172 (486)
Q Consensus 95 ~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~--~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~ 172 (486)
++.+++++++++|++|||+|++|.++++||+++|+++||+++... +++|+++++|++ +|+|+|+||+||||+++.+.
T Consensus 3 ~~~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~~-~~~i~l~~H~D~vp~~~~~~ 81 (269)
T 4h2k_A 3 AMKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTS-EPVIAFAGHTDVVPTGDENQ 81 (269)
T ss_dssp HHHHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECSS-SCEEEEEEECCBCCCCCGGG
T ss_pred chHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeCCC-CCEEEEEeeecccCCCCccc
Confidence 456789999999999999999999999999999999999987642 468999998543 78999999999999876544
Q ss_pred C---cccc-cCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcC--CCccccE
Q 011407 173 W---EYKS-KVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADG--ALEDVEA 241 (486)
Q Consensus 173 ~---p~~~-~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g--~~~~~d~ 241 (486)
| ||.+ +++|++||||+. +++++++.|++.|++.+.+++++|.|+|+++||.|+ |++.+++.. ...++|+
T Consensus 82 w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~ 161 (269)
T 4h2k_A 82 WSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITY 161 (269)
T ss_dssp CSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCE
T ss_pred ccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCE
Confidence 4 7776 468999999995 889999999999998887889999999999999986 999887631 1236899
Q ss_pred EEEEecCCCCCce-eEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEE
Q 011407 242 IFAVHVSHEHPTG-VIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVT 320 (486)
Q Consensus 242 ~i~~~~~~~~p~g-~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~ 320 (486)
+++.+++.....+ .+. .| + .|.
T Consensus 162 ~i~~Ept~~~~~~~~i~--~g---------------~--------~G~-------------------------------- 184 (269)
T 4h2k_A 162 CMVGEPSSAKNLGDVVK--NG---------------R--------RGG-------------------------------- 184 (269)
T ss_dssp EEECCCCBSSSTTSEEE--CS---------------C--------TTC--------------------------------
T ss_pred EEEECCCCCCcCCceeE--Ee---------------c--------ccc--------------------------------
Confidence 9988875322111 111 11 1 111
Q ss_pred EEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHH
Q 011407 321 YFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVA 400 (486)
Q Consensus 321 ~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~ 400 (486)
| +. ..++++++.+.+++
T Consensus 185 -----------------------------------------------G------~~----------~~~~~l~~~l~~aa 201 (269)
T 4h2k_A 185 -----------------------------------------------G------FL----------TKPGKLLDSITSAI 201 (269)
T ss_dssp -----------------------------------------------C----------------------HHHHHHHHHH
T ss_pred -----------------------------------------------c------cc----------CCCcHHHHHHHHHH
Confidence 1 00 12357999999999
Q ss_pred HHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 401 IDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 401 ~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
++..|.++. .....|++|+++++...+.++ .+|+... ..|+++|+++++++.+++++|..++.+++.
T Consensus 202 ~~~~gi~~~--~~~~gggtDa~~~~~~g~p~~-~~~~~~~------~~Hs~~E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 202 EETIGITPK--AETGGGTSDGRFIALMGAEVV-EFGPLNS------TIHKVNECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp HHHHSCCCE--EECC--CHHHHHHHTTTCEEE-ECCSBCT------TTTSTTCEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHhCCCCE--EecCCCCchHHHHHhhCCCEE-EEEeCCC------CCcCCcccccHHHHHHHHHHHHHHHHHHhh
Confidence 986688764 345678999999986543322 3577654 489999999999999999999999998864
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.93 E-value=2e-25 Score=208.04 Aligned_cols=158 Identities=15% Similarity=0.126 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHhhhCCCCCC--ChHHHHHHHHHHHHhCCCceEecC---CCceEEEEEc-CCC-CcEEEEEeccCcccCc
Q 011407 96 TVDWLKSVRRTIHQNPELAF--QEFETSRLLRAELDRMEIGYKYPL---AKTGIRAWVG-TGG-PPFVALRADMDALPIQ 168 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~--~E~~~a~~l~~~L~~~G~~v~~~~---~~~nvia~~g-~~~-~~~ill~gH~DtVP~~ 168 (486)
..+++++++++|++|||+|+ +|.++++||+++|+++|++++... +++|+++++. +++ +|+|+|+||+||||++
T Consensus 8 ~~~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~ 87 (198)
T 1q7l_A 8 EEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVF 87 (198)
T ss_dssp CCCHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCC
T ss_pred hHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCC
Confidence 35678999999999999998 689999999999999999987642 5679999984 343 4899999999999986
Q ss_pred C--CCCCccccc--CCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--cHHHHHHcCCCc--
Q 011407 169 E--AVEWEYKSK--VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN--GAKRMMADGALE-- 237 (486)
Q Consensus 169 ~--~~~~p~~~~--~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~--G~~~l~~~g~~~-- 237 (486)
+ |+..||.+. ++|++||||+ | ++++++|.|++.|++.+.+++++|.|+|+++||.|+ |++.+++++.+.
T Consensus 88 ~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~ 167 (198)
T 1q7l_A 88 KEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHAL 167 (198)
T ss_dssp GGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTT
T ss_pred cccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccC
Confidence 4 355578774 5899999995 5 899999999999999888899999999999999983 999998764322
Q ss_pred cccEEEEEecCCCCCcee
Q 011407 238 DVEAIFAVHVSHEHPTGV 255 (486)
Q Consensus 238 ~~d~~i~~~~~~~~p~g~ 255 (486)
++|+++ +.+..+|++.
T Consensus 168 ~~~~~i--d~g~~ept~~ 183 (198)
T 1q7l_A 168 RAGFAL--DEGIANPTDA 183 (198)
T ss_dssp CEEEEE--ECCCCCSSSS
T ss_pred CcCEEE--ecCccCCCCC
Confidence 345555 5445567663
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.92 E-value=1.3e-24 Score=219.30 Aligned_cols=249 Identities=14% Similarity=0.108 Sum_probs=167.5
Q ss_pred HHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCC-CCcEEEEEeccCccc---------------
Q 011407 103 VRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTG-GPPFVALRADMDALP--------------- 166 (486)
Q Consensus 103 ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~-~~~~ill~gH~DtVP--------------- 166 (486)
++++|+++||+|++|.+++++|+++|+++|++++.+ ...|+++++.+. ++|+|+|.||+||||
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTD-VLGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-CCCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 588999999999999999999999999999998774 346999988433 358999999999999
Q ss_pred -CcCCCCCcccc------------------------------------------------cC-C-------------Cee
Q 011407 167 -IQEAVEWEYKS------------------------------------------------KV-A-------------GKM 183 (486)
Q Consensus 167 -~~~~~~~p~~~------------------------------------------------~~-d-------------G~l 183 (486)
.+.+...||.+ ++ + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 34444444433 11 4 899
Q ss_pred eecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEEecc
Q 011407 184 HACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRP 260 (486)
Q Consensus 184 ~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~ 260 (486)
|||..| ++++++|.|++.|+ +++++|.|+|+++||.|+ |++.+.+. ..+|++++.+++..
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~---~~~~~~i~~d~~~~---------- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ---LKPTCAIVVETTTA---------- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH---HCCSEEEEEEEEEE----------
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc---cCCCEEEEEecccC----------
Confidence 999555 88888888888876 478999999999999997 88887763 24788887775310
Q ss_pred CcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEE
Q 011407 261 GPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGT 340 (486)
Q Consensus 261 G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~d 340 (486)
+ ++.|+++|++.|+.|.|++..+ . . .+..
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i~~---------~--------~----------~~~~------------- 253 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAITF---------Y--------H----------RGYV------------- 253 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEECS---------C--------C----------SSSC-------------
T ss_pred -----C------CCCCCccccCCcccCCCcEEEE---------e--------C----------CCCC-------------
Confidence 0 4567788988899998854110 0 0 0000
Q ss_pred EeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccch
Q 011407 341 LRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAED 420 (486)
Q Consensus 341 iR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD 420 (486)
.+..+.+.+++++++ .|.+.. ......+++|
T Consensus 254 -----------------------------------------------~~~~l~~~l~~~a~~-~gi~~~-~~~~~~ggtD 284 (340)
T 2fvg_A 254 -----------------------------------------------IPKEIFQTIVDTAKN-NDIPFQ-MKRRTAGGTD 284 (340)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHHHH-TTCCCE-ECCCC-----
T ss_pred -----------------------------------------------CCHHHHHHHHHHHHH-cCCCeE-EEecCCCCcc
Confidence 011233333333333 244332 1124567899
Q ss_pred HHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 421 FSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 421 ~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
.+.+.. .+|++. +|++.. .+|+++|+++++++..++++|..++.+++.+
T Consensus 285 a~~~~~~~~GiP~v~--~g~~~~------~~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~~ 336 (340)
T 2fvg_A 285 AGRYARTAYGVPAGV--ISTPAR------YIHSPNSIIDLNDYENTKKLIKVLVEEGKIV 336 (340)
T ss_dssp --------CCSCEEE--EEEEEE------ESSTTCEEEEHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHhhCCCCcEEE--eccccc------ccCChhhcccHHHHHHHHHHHHHHHHhcccc
Confidence 998874 588875 455543 3999999999999999999999999988763
No 32
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.89 E-value=1.6e-22 Score=203.40 Aligned_cols=242 Identities=20% Similarity=0.160 Sum_probs=177.6
Q ss_pred HHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCccc-------------
Q 011407 100 LKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALP------------- 166 (486)
Q Consensus 100 l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP------------- 166 (486)
+++++++|+++||+|++|.+++++|+++|+++|+ ++. +...|++++++++ +|+|+|.||+|||+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 6789999999999999999999999999999999 765 4578999988543 68999999999994
Q ss_pred ---CcCCCC-------------------------------------------------------------------Cccc
Q 011407 167 ---IQEAVE-------------------------------------------------------------------WEYK 176 (486)
Q Consensus 167 ---~~~~~~-------------------------------------------------------------------~p~~ 176 (486)
.+.+.. .||.
T Consensus 81 ~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~ 160 (332)
T 2wyr_A 81 FRKVGGIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFS 160 (332)
T ss_dssp EEEESCCCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCE
T ss_pred EEecCCcChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccE
Confidence 443211 0122
Q ss_pred ccCCCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCc
Q 011407 177 SKVAGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPT 253 (486)
Q Consensus 177 ~~~dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~ 253 (486)
...+|++|||..| +++++++.+++.|++.+ ++++|.|+|+++||.|+ |++.+.+. + .+|++++.+++...
T Consensus 161 ~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~~~~~-- 233 (332)
T 2wyr_A 161 VLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH--Y-YPQYAFAIDSFACC-- 233 (332)
T ss_dssp EETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT--C-CCSEEEEECCEECC--
T ss_pred EecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc--c-CCCEEEEEeccccc--
Confidence 2357899999555 88899999999998764 67999999999999997 88888642 2 57898887753210
Q ss_pred eeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccC
Q 011407 254 GVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPD 333 (486)
Q Consensus 254 g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~ 333 (486)
... + +.+..| . |..
T Consensus 234 ----~~p-----~---------------~~~~lg--------------------------~----------G~~------ 247 (332)
T 2wyr_A 234 ----SPL-----T---------------GDVKLG--------------------------K----------GPV------ 247 (332)
T ss_dssp ----SGG-----G---------------TTCCTT--------------------------S----------CCE------
T ss_pred ----CCC-----C---------------CceeeC--------------------------C----------CCE------
Confidence 000 1 000000 0 100
Q ss_pred eEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccC
Q 011407 334 AVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVP 413 (486)
Q Consensus 334 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~ 413 (486)
+.+.. + ....++++++.+++++++. |.+.. ..
T Consensus 248 ---------------------------------------i~~~d-----~-~~~~~~~l~~~l~~~~~~~-gi~~~--~~ 279 (332)
T 2wyr_A 248 ---------------------------------------IRAVD-----N-SAIYSRDLARKVWSIAEKN-GIEIQ--IG 279 (332)
T ss_dssp ---------------------------------------EEEEC-----S-SCBCCHHHHHHHHHHHHHT-TCCCE--EE
T ss_pred ---------------------------------------EEEcC-----C-CCCCCHHHHHHHHHHHHHc-CCCeE--Ee
Confidence 11111 0 2346889999999999984 87653 33
Q ss_pred CCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHH
Q 011407 414 PMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAER 473 (486)
Q Consensus 414 ~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~ 473 (486)
..+++||.+.+..++|++. +|++.. .+|+++|+++++++..+++++..++.+
T Consensus 280 ~~~ggtDa~~~~~GiPtv~--lg~~~~------~~Hs~~E~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 280 VTGGGTDASAFQDRSKTLA--LSVPIK------YLHSEVETLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp ECSSCCGGGGGTTTSEEEE--EECEEB------SCSSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred cCCCCchHHHHHcCCCEEE--EcCCcC------CCCChhhcccHHHHHHHHHHHHHHHHh
Confidence 4558999998877788775 466543 499999999999999999999998865
No 33
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.88 E-value=1.2e-21 Score=200.06 Aligned_cols=256 Identities=16% Similarity=0.156 Sum_probs=182.5
Q ss_pred HHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEE-cCCCCcEEEEEeccCcccC---------
Q 011407 98 DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV-GTGGPPFVALRADMDALPI--------- 167 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~-g~~~~~~ill~gH~DtVP~--------- 167 (486)
+++++++++|+++||+|++|.+++++|+++|+++|++++.+ ...|+++++ +++++|+|+|.|||||||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD-RLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC-TTCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc-CCCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 46889999999999999999999999999999999998764 457999987 4324689999999999992
Q ss_pred -------cCC---------------CC-------C--cc--c--------------------------------------
Q 011407 168 -------QEA---------------VE-------W--EY--K-------------------------------------- 176 (486)
Q Consensus 168 -------~~~---------------~~-------~--p~--~-------------------------------------- 176 (486)
+.+ +. | |+ +
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 100 00 1 11 1
Q ss_pred -----cc-CCCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEec
Q 011407 177 -----SK-VAGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHV 247 (486)
Q Consensus 177 -----~~-~dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~ 247 (486)
.. ++|++|||+.| +++++++.+++.|++.+ ++++|.|+|+++||.|+ |++.+... + .+|++++.++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~--~-~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT--I-QPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc--c-CCCEEEEEec
Confidence 00 26899999877 88999999999999764 67999999999999997 88887542 2 4788888775
Q ss_pred CCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCcc
Q 011407 248 SHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDH 327 (486)
Q Consensus 248 ~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~ 327 (486)
+.. +. .. |. .|+.+. ..++. |
T Consensus 241 ~~~---~~---~~-----g~---------------~~~~~~---------------------~~lg~----------G-- 261 (373)
T 1vhe_A 241 GIA---GD---TP-----GI---------------SEKEAQ---------------------SKMGK----------G-- 261 (373)
T ss_dssp EEC---CC---ST-----TC---------------CTTTCC---------------------CCTTS----------C--
T ss_pred ccc---CC---CC-----CC---------------cccccc---------------------cccCC----------C--
Confidence 421 00 00 11 121110 00000 1
Q ss_pred CccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 011407 328 LDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPM 407 (486)
Q Consensus 328 ~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~ 407 (486)
| .+.+.. . +...++++++.+++++++. |.+
T Consensus 262 ----~---------------------------------------~i~~~~---~---~~~~~~~l~~~l~~~a~~~-gi~ 291 (373)
T 1vhe_A 262 ----P---------------------------------------QIIVYD---A---SMVSHKGLRDAVVATAEEA-GIP 291 (373)
T ss_dssp ----C---------------------------------------EEEEEE---T---TEECCHHHHHHHHHHHHHH-TCC
T ss_pred ----c---------------------------------------eEEEeC---C---CCCCCHHHHHHHHHHHHHc-CCC
Confidence 0 011111 1 2346889999999999885 876
Q ss_pred cccccCCCcccchHHHH--Hh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 408 NYRVVPPMMGAEDFSFY--SE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 408 ~~~~~~~~~g~tD~~~~--~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
... .....+++|.+.+ +. .+|++.+ |++.. .+|+++|+++++++..++++++.++.+++..
T Consensus 292 ~~~-~~~~~ggtDa~~~~~~~~GiPtv~l--g~~~~------~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~~ 355 (373)
T 1vhe_A 292 YQF-DAIAGGGTDSGAIHLTANGVPALSI--TIATR------YIHTHAAMLHRDDYENAVKLITEVIKKLDRK 355 (373)
T ss_dssp CEE-EEETTCCCTHHHHTTSTTCCCEEEE--EEEEB------STTSSCEEEEHHHHHHHHHHHHHHHHHCCHH
T ss_pred eEE-ecCCCCCccHHHHHHhCCCCcEEEE--ccccc------cCCChhheecHHHHHHHHHHHHHHHHHhcHH
Confidence 531 1345688999998 43 5898764 55543 3899999999999999999999999987764
No 34
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.87 E-value=1.4e-25 Score=223.40 Aligned_cols=325 Identities=14% Similarity=0.022 Sum_probs=177.1
Q ss_pred HHHHHHhhhCCCCCCChH-HHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCCcccccC
Q 011407 101 KSVRRTIHQNPELAFQEF-ETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKV 179 (486)
Q Consensus 101 ~~ll~~lv~iPs~s~~E~-~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p~~~~~ 179 (486)
+++|++|++|||+|++|. .+++||+++|+++|++++++ ...||+|+++++ +|+|+|.||+||||..... ...
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D-~~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~-----~~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGS-SPRIMVAAHMDKIGVMVNH-----IDK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEEC-TTCCEEEEECCS-SSEEEEEEECCBCEEEEEE-----ECT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEe-CCCeEEEEECCC-CceEEEEeccccCCCcCCe-----eec
Confidence 578999999999999885 68999999999999999875 356999999765 6899999999999853211 124
Q ss_pred CCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeE
Q 011407 180 AGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVI 256 (486)
Q Consensus 180 dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i 256 (486)
+|.+++++.+ ...++...++..+... ..+...+.++++.+||.+. |.+.+.......+..+....... ..+
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~-- 158 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEK-GERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEAE---EMG-- 158 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETT-EEEEEEECCCCGGGC---------CCGGGCCEECSCSSHHHHH---HTT--
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhcc-CCccceEEEeeeeeEecccccccchhhhhhhhhhcccchhhhh---ccc--
Confidence 6777776654 1111221222222222 2356778888999999886 66555443222111111100000 000
Q ss_pred EeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEE----EEEEecCccCcccc
Q 011407 257 GSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVS----VTYFNGGDHLDMIP 332 (486)
Q Consensus 257 ~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~----v~~i~gG~~~nvIP 332 (486)
+..+. .+.....+++.+...|++.+..+.+++.. ++..++++....... ..... ++...++...|.++
T Consensus 159 -~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~ 230 (354)
T 2wzn_A 159 -FRVGT--VGEFAPNFTRLNEHRFATPYLDDRICLYA---MIEAARQLGDHEADI--YIVGSVQEEVGLRGARVASYAIN 230 (354)
T ss_dssp -CCTTC--EEEECCCCEECSSSEEECTTHHHHHHHHH---HHHHHHHCCCCSSEE--EEEEESCGGGTSHHHHHHHHHHC
T ss_pred -cccce--eeeeeeeeEeecccccccccccccchhhh---HHHHHHHHHhccccc--cccccceeeeeeecccccccccc
Confidence 01111 12334456667777776655444444444 444444442111000 00000 11112234567777
Q ss_pred CeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHH-HHhcCCCcccc
Q 011407 333 DAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVA-IDLLGPMNYRV 411 (486)
Q Consensus 333 ~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~-~~~~G~~~~~~ 411 (486)
..+....+.+........ .......+....... ....+........... ....+..+ .
T Consensus 231 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~ 289 (354)
T 2wzn_A 231 PEVGIAMDVTFAKQPHDK----------GKIVPELGKGPVMDV---------GPNINPKLRAFADEVAKKYEIPLQV--E 289 (354)
T ss_dssp CSEEEEEEEEECCCTTST----------TCCCCCTTSCCEEEE---------STTSCHHHHHHHHHHHHHTTCCCEE--E
T ss_pred cccceeeeeeeccccchh----------hhhheeecccccccc---------ccccCcchhhhhHHHHHHhcCCCce--E
Confidence 777777777766543211 000001111111111 1112222222222222 22223322 3
Q ss_pred cCCCcccchHHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHH
Q 011407 412 VPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 475 (486)
Q Consensus 412 ~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l 475 (486)
.....|+||++++.. ++|++. +||+.. .+|+++|+++++++.+++++|..++.++-
T Consensus 290 ~~~~~ggTDa~~~~~~~~Giptv~--~G~g~~------~~Ht~~E~v~i~dl~~~~~ll~~~i~~L~ 348 (354)
T 2wzn_A 290 PSPRPTGTDANVMQINKEGVATAV--LSIPIR------YMHSQVELADARDVDNTIKLAKALLEELK 348 (354)
T ss_dssp ECCSCCSSHHHHHHTSTTCCEEEE--EEEEEB------STTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred EEecccccHHHHHHHhcCCCCEEE--ECcccC------CCCcccEEEEHHHHHHHHHHHHHHHHhCc
Confidence 466789999998742 478775 577653 38999999999999999999999998863
No 35
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.87 E-value=2.9e-21 Score=195.52 Aligned_cols=245 Identities=16% Similarity=0.088 Sum_probs=165.9
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCC-CCcEEEEEeccCcc---------
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTG-GPPFVALRADMDAL--------- 165 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~-~~~~ill~gH~DtV--------- 165 (486)
.++++++++++|++|||+|++|.++++||+++|+++|++++.+ ...|+++++++. ++|+|+|+||+|||
T Consensus 4 ~~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~ 82 (349)
T 2gre_A 4 HTKETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN-NKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKP 82 (349)
T ss_dssp HHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC-SSSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECT
T ss_pred cHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe-cCCcEEEEecCCCCCceEEEEecccccceeEEEECC
Confidence 3678999999999999999999999999999999999998764 457999998433 35899999999999
Q ss_pred -------cCcCCCCCcccc-------------------------------------------------------------
Q 011407 166 -------PIQEAVEWEYKS------------------------------------------------------------- 177 (486)
Q Consensus 166 -------P~~~~~~~p~~~------------------------------------------------------------- 177 (486)
|.|.+...+|..
T Consensus 83 ~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~ 162 (349)
T 2gre_A 83 DGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEV 162 (349)
T ss_dssp TSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCT
T ss_pred CCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCC
Confidence 444432222210
Q ss_pred ------------cCCCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEE
Q 011407 178 ------------KVAGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAI 242 (486)
Q Consensus 178 ------------~~dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~ 242 (486)
..+|++|||+.| ++++++|.+++.|++.+.+++++|.|+|+++||.|+ |++.+ . .++|++
T Consensus 163 gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~----~-~~~~~~ 237 (349)
T 2gre_A 163 GDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI----P-EETVEY 237 (349)
T ss_dssp TCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC----C-TTEEEE
T ss_pred CCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc----c-cCCCEE
Confidence 135799999876 889999999999998888889999999999999986 77765 1 247788
Q ss_pred EEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEE
Q 011407 243 FAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYF 322 (486)
Q Consensus 243 i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i 322 (486)
++.+++.. +. |-+.++.|++
T Consensus 238 i~~D~~~~---------------~~------------~p~~~~~g~~--------------------------------- 257 (349)
T 2gre_A 238 LAVDMGAL---------------GD------------GQASDEYTVS--------------------------------- 257 (349)
T ss_dssp EEECCCCC---------------SC------------C--CCTTSEE---------------------------------
T ss_pred EEEecccc---------------cC------------CCCCCCCceE---------------------------------
Confidence 87765321 00 0000010000
Q ss_pred ecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH
Q 011407 323 NGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAID 402 (486)
Q Consensus 323 ~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~ 402 (486)
+.... ..+ ..+..+++.+++++++
T Consensus 258 --------------------------------------------------i~~~~---~~~---~~~~~l~~~l~~~a~~ 281 (349)
T 2gre_A 258 --------------------------------------------------ICAKD---SSG---PYHYALRKHLVELAKT 281 (349)
T ss_dssp --------------------------------------------------EEEEE---TTE---ECCHHHHHHHHHHHHH
T ss_pred --------------------------------------------------EEEcc---CCC---CCCHHHHHHHHHHHHH
Confidence 00000 000 2477788888888888
Q ss_pred hcCCCcccccCCCcccchHHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHH
Q 011407 403 LLGPMNYRVVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAER 473 (486)
Q Consensus 403 ~~G~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~ 473 (486)
. |.+... .....+++|.+.+.. .+|++.+ |++.. ..|+ .|+++++++..+++++..++.+
T Consensus 282 ~-gi~~q~-~~~~ggGsDa~~~~~~~~GiPt~~l--g~~~~------~~Hs-~E~~~~~dl~~~~~ll~~~l~~ 344 (349)
T 2gre_A 282 N-HIEYKV-DIYPYYGSDASAAIRAGFDVKHALI--GAGID------SSHA-FERTHESSIAHTEALVYAYVMS 344 (349)
T ss_dssp H-TCCEEE-EECSCC--------CCSSSCEEEEE--EECCB------STTS-SEEEEHHHHHHHHHHHHHHHHS
T ss_pred c-CCCcEE-eccCCCCccHHHHHHhCCCCcEEEe--ccCcc------cccc-ceeccHHHHHHHHHHHHHHHhc
Confidence 4 775431 134577899888753 5888754 44432 3999 9999999999999999888764
No 36
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.85 E-value=3e-20 Score=188.39 Aligned_cols=249 Identities=17% Similarity=0.164 Sum_probs=176.1
Q ss_pred HHHHHHHhhhCCCCCCCh-HHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCccc------------
Q 011407 100 LKSVRRTIHQNPELAFQE-FETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALP------------ 166 (486)
Q Consensus 100 l~~ll~~lv~iPs~s~~E-~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP------------ 166 (486)
+++++++|+++||+|++| .+++++|+++|+++|++++.+ ...|++++++++ +|+|+|.||+|||+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 678999999999999999 999999999999999998764 467999988544 58999999999995
Q ss_pred ----CcCCCCCc-------------------------c---------------------------------c--------
Q 011407 167 ----IQEAVEWE-------------------------Y---------------------------------K-------- 176 (486)
Q Consensus 167 ----~~~~~~~p-------------------------~---------------------------------~-------- 176 (486)
.+.+...+ + .
T Consensus 86 ~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~ 165 (353)
T 1y0y_A 86 RVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWD 165 (353)
T ss_dssp EEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEEC
T ss_pred EEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEec
Confidence 33321100 0 0
Q ss_pred ----ccCCCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCC
Q 011407 177 ----SKVAGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSH 249 (486)
Q Consensus 177 ----~~~dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~ 249 (486)
...++++|||..| +++++++.+++.|++ ++++|.|+|+++||.|+ |++.+... + .+|++++.+++.
T Consensus 166 ~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~--~-~~~~~i~~d~~~ 238 (353)
T 1y0y_A 166 GRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG--I-EPDYGFAIDVTI 238 (353)
T ss_dssp CCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEEEEE
T ss_pred cCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc--c-CCCEEEEEeccc
Confidence 0014678999666 888889999888775 67899999999999997 88887642 2 478888877542
Q ss_pred CCCceeEEeccCcccceeeEEEEEEEeecCCCCCC-CCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccC
Q 011407 250 EHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANP-HRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHL 328 (486)
Q Consensus 250 ~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p-~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~ 328 (486)
.. + |-+.. +.| ...++ +|
T Consensus 239 ~~--~-------------------------~p~~~~~~g---------------------~~~lg----------~G--- 257 (353)
T 1y0y_A 239 AA--D-------------------------IPGTPEHKQ---------------------VTHLG----------KG--- 257 (353)
T ss_dssp CC--C-------------------------STTCCGGGC---------------------CCCTT----------SC---
T ss_pred cc--C-------------------------CCCCccccC---------------------ccccC----------CC---
Confidence 10 0 10000 000 00000 11
Q ss_pred ccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCc
Q 011407 329 DMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMN 408 (486)
Q Consensus 329 nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~ 408 (486)
|. +.+.. . ....++++++.+++++++. |.+.
T Consensus 258 ---~~---------------------------------------i~~~d---~---~~~~~~~l~~~l~~~a~~~-gi~~ 288 (353)
T 1y0y_A 258 ---TA---------------------------------------IKIMD---R---SVICHPTIVRWLEELAKKH-EIPY 288 (353)
T ss_dssp ---EE---------------------------------------EEEEE---T---TEECCHHHHHHHHHHHHHT-TCCE
T ss_pred ---cE---------------------------------------EEEeC---C---CCCCCHHHHHHHHHHHHHc-CCCE
Confidence 00 11111 0 2335889999999999985 8765
Q ss_pred ccccCCCcccchHHHH--Hh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHh
Q 011407 409 YRVVPPMMGAEDFSFY--SE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 409 ~~~~~~~~g~tD~~~~--~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
.. .....+++|.+.+ +. .+|++.+ |++.. .+|+++|+++++++..+++++..++.++.+
T Consensus 289 ~~-~~~~~ggsDa~~~~~~~~GiPtv~l--g~~~~------~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 289 QL-EILLGGGTDAGAIHLTKAGVPTGAL--SVPAR------YIHSNTEVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp EE-EECSSCCCTHHHHTTSTTCCCEEEE--EEEEB------SCSSSCEEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred EE-eecCCCCchHHHHHHhCCCCcEEEE--ccccc------ccCCHHHhcCHHHHHHHHHHHHHHHHhhhh
Confidence 31 1346789999998 43 5898764 55543 399999999999999999999999988754
No 37
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.84 E-value=2.3e-20 Score=188.66 Aligned_cols=250 Identities=16% Similarity=0.126 Sum_probs=167.9
Q ss_pred HHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCccc-----------
Q 011407 98 DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALP----------- 166 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP----------- 166 (486)
+++++++++|+++||+|++|.+++++|+++|+++|++++.+ ...|+++++.+.+.|.|+|.||+|||+
T Consensus 5 ~~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l 83 (346)
T 1vho_A 5 METGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTT-RHGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFA 83 (346)
T ss_dssp CCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEEC-TTSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEE
T ss_pred HHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEe-cCCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeE
Confidence 45788999999999999999999999999999999998764 457999988433358999999999994
Q ss_pred ----CcCCCCCcc----------c----c------------------------------------------------cCC
Q 011407 167 ----IQEAVEWEY----------K----S------------------------------------------------KVA 180 (486)
Q Consensus 167 ----~~~~~~~p~----------~----~------------------------------------------------~~d 180 (486)
.+.+...+. + . ..+
T Consensus 84 ~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g 163 (346)
T 1vho_A 84 RLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETN 163 (346)
T ss_dssp EEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEET
T ss_pred EEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhc
Confidence 322211000 0 0 012
Q ss_pred CeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEE
Q 011407 181 GKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIG 257 (486)
Q Consensus 181 G~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~ 257 (486)
|+++||+.| .++++++.+++.+++.+ +++++.++|+.+||.|. |+..... .+ .+|++++++..
T Consensus 164 ~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~--~i-~~~~~i~~D~~--------- 229 (346)
T 1vho_A 164 GKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY--EI-NPDAAIVMDVT--------- 229 (346)
T ss_dssp TEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC--CC-CCSEEEEEEEE---------
T ss_pred CeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc--cc-CCCEEEEeecc---------
Confidence 678899877 67788888888887654 66899999999999996 7665322 12 35666655432
Q ss_pred eccCcccceeeEEEEEEEeecCCCCC-CCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEE
Q 011407 258 SRPGPLLAGCGFFHAVISGKKGGAAN-PHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVV 336 (486)
Q Consensus 258 ~~~G~~~ag~~~~~i~v~G~~~Ha~~-p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~ 336 (486)
|++. |. .+ . . + ++ +
T Consensus 230 ----------------------~~~~~~~--~~--~-----------~--~----~~----------~------------ 244 (346)
T 1vho_A 230 ----------------------FASEPPF--SD--H-----------I--E----LG----------K------------ 244 (346)
T ss_dssp ----------------------CCCCTTS--CC--C-----------C--C----TT----------S------------
T ss_pred ----------------------cccCCCC--Cc--c-----------c--c----cC----------C------------
Confidence 1110 11 00 0 0 0 00 0
Q ss_pred EEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCC-
Q 011407 337 IGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPM- 415 (486)
Q Consensus 337 ~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~- 415 (486)
|..+++ +...++++++.+++++++ .|.+.. ....
T Consensus 245 -------------------------------g~~i~~-----------~~~~~~~l~~~~~~~a~~-~gi~~~--~~~~~ 279 (346)
T 1vho_A 245 -------------------------------GPVIGL-----------GPVVDRNLVQKIIEIAKK-HNVSLQ--EEAVG 279 (346)
T ss_dssp -------------------------------CCEEEC-----------STTSCHHHHHHHHHHHHH-TTCCCE--EESSC
T ss_pred -------------------------------CceEEe-----------CCcCCHHHHHHHHHHHHH-CCCCEE--EEeCC
Confidence 112221 234688999999999998 587654 2333
Q ss_pred c-ccchHHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhccc
Q 011407 416 M-GAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYGQ 480 (486)
Q Consensus 416 ~-g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~~~ 480 (486)
. +++|.+.+.. .+|++.+ |++.. .+|+++|+++++++..+++++..++.+++.+.+.
T Consensus 280 g~ggsDa~~~~~~~~gipt~~l--g~~~~------~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~~~~~ 340 (346)
T 1vho_A 280 GRSGTETDFVQLVRNGVRTSLI--SIPLK------YMHTPVEMVDPRDVEELARLLSLVAVELEVEGGS 340 (346)
T ss_dssp CC----CTTHHHHHTTCEEEEE--EEECB------STTSTTEEECHHHHHHHHHHHHHHHHHCC-----
T ss_pred CCCCchHHHHHHhCCCCcEEEE--ehhhc------ccccHHHhcCHHHHHHHHHHHHHHHHHhhhhcCc
Confidence 3 8999998864 5888764 55443 3999999999999999999999999998876543
No 38
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.81 E-value=2.1e-18 Score=174.37 Aligned_cols=251 Identities=16% Similarity=0.183 Sum_probs=174.0
Q ss_pred HHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCccc---------------
Q 011407 102 SVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALP--------------- 166 (486)
Q Consensus 102 ~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP--------------- 166 (486)
+++++|+++||+|++|.++++||+++|+++|++++.+ ...|+++++.+.+.|+|+|.||+|||+
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d-~~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEEC-TTCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-cCCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 7899999999999999999999999999999998764 456999987433358999999999996
Q ss_pred -CcCCC--C----------------------------------------------------------CcccccCCCeeee
Q 011407 167 -IQEAV--E----------------------------------------------------------WEYKSKVAGKMHA 185 (486)
Q Consensus 167 -~~~~~--~----------------------------------------------------------~p~~~~~dG~l~G 185 (486)
.+.+. . .+|....+|+++|
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 11110 0 0001114688999
Q ss_pred cCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCc
Q 011407 186 CGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGP 262 (486)
Q Consensus 186 rG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~ 262 (486)
|+.| .++++++.+++.+++.+ +++++.++|+.+||.|. |+...... + .+|+++.++.... +
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~--i-~~~~~i~~D~~~~---~-------- 229 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTACW---A-------- 229 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH--H-CCSEEEEECCCCC---S--------
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc--c-CCCEEEEEecccc---C--------
Confidence 9877 77888888988887643 67899999999999997 77655432 2 3677777664321 0
Q ss_pred ccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEe
Q 011407 263 LLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLR 342 (486)
Q Consensus 263 ~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR 342 (486)
..|. .+. .. ...++ .|
T Consensus 230 -------------------~~~~--~~~-----------~~-----~~~~~----------~G----------------- 245 (348)
T 1ylo_A 230 -------------------KNFD--YGA-----------AN-----HRQIG----------NG----------------- 245 (348)
T ss_dssp -------------------STTC--CST-----------TC-----CCCTT----------SC-----------------
T ss_pred -------------------CCCC--CCc-----------cc-----cccCC----------CC-----------------
Confidence 0111 110 00 00000 00
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHH
Q 011407 343 AFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFS 422 (486)
Q Consensus 343 ~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~ 422 (486)
.. +.+.. . ....++.+++.+++++++ .|.+... .....|++|.+
T Consensus 246 --------------------------~~--i~~~~---~---~~~~~~~l~~~~~~~a~~-~gi~~~~-~~~~~ggsDa~ 289 (348)
T 1ylo_A 246 --------------------------PM--LVLSD---K---SLIAPPKLTAWIETVAAE-IGVPLQA-DMFSNGGTDGG 289 (348)
T ss_dssp --------------------------CE--EEEEC---S---SCBCCHHHHHHHHHHHHH-HTCCCEE-EECSSCCCHHH
T ss_pred --------------------------cE--EEEeC---C---CCCCCHHHHHHHHHHHHH-cCCCeEE-eecCCCcchHH
Confidence 01 11211 1 123688899999999988 4876532 13467899999
Q ss_pred HHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhh
Q 011407 423 FYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477 (486)
Q Consensus 423 ~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~ 477 (486)
.++. .+|++. +|++.. .+|+++|+++++++..+++++..++.++...
T Consensus 290 ~~~~~~~gipt~~--lg~~~~------~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~~~ 339 (348)
T 1ylo_A 290 AVHLTGTGVPTLV--MGPATR------HGHCAASIADCRDILQMEQLLSALIQRLTRE 339 (348)
T ss_dssp HHHTSTTCCCEEE--EECCCB------SCSSSCEEEEHHHHHHHHHHHHHHHHTCCHH
T ss_pred HHHHhcCCCCEEE--ECcccC------cCCCcceEeeHHHHHHHHHHHHHHHHHhhHH
Confidence 9864 588875 566543 3999999999999999999999999876543
No 39
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.80 E-value=1.3e-19 Score=181.16 Aligned_cols=239 Identities=14% Similarity=0.068 Sum_probs=167.2
Q ss_pred cchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC----C--CceEEEEEcCCCCcEEEEEeccCccc-
Q 011407 94 PETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL----A--KTGIRAWVGTGGPPFVALRADMDALP- 166 (486)
Q Consensus 94 ~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~----~--~~nvia~~g~~~~~~ill~gH~DtVP- 166 (486)
+.+++++++++++|+++||+|++|.+++++|+++|+++|++++.+. + ..|+++.+++ + |.|+|.||||||+
T Consensus 13 ~~~~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~ 90 (321)
T 3cpx_A 13 ENLYFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGF 90 (321)
T ss_dssp CGGGCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEE
T ss_pred hhHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCCe
Confidence 5678889999999999999999999999999999999999876543 1 4689998754 3 7899999999994
Q ss_pred ----------CcCCCCCc------------c-------------------------------cccCCCeeeecCch--HH
Q 011407 167 ----------IQEAVEWE------------Y-------------------------------KSKVAGKMHACGHD--AH 191 (486)
Q Consensus 167 ----------~~~~~~~p------------~-------------------------------~~~~dG~l~GrG~~--g~ 191 (486)
.+.+..|+ + ... +|+++||+.| ++
T Consensus 91 ~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~-~g~i~~~~~D~k~G 169 (321)
T 3cpx_A 91 TVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREE-GDFILTPYLDDRLG 169 (321)
T ss_dssp EECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEE-TTEEECTTHHHHHH
T ss_pred EecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEE-cCEEEEcCCcCHHH
Confidence 32211111 0 001 2678888877 67
Q ss_pred HHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHH---HcCCCccccEEEEEecCCCCCceeEEeccCccccee
Q 011407 192 VAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMM---ADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGC 267 (486)
Q Consensus 192 ~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~---~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~ 267 (486)
+++++.+++.++ + +.++|+.+||.|+ |+.... .+ .+ .+|++++.|++.. +.
T Consensus 170 ~aa~l~al~~l~------~--i~~~~t~~EEvG~~Ga~~a~~~~~~-~~-~~~~~i~~D~~~~---------------~~ 224 (321)
T 3cpx_A 170 VWTALELAKTLE------H--GIIAFTCWEEHGGGSVAYLARWIYE-TF-HVKQSLICDITWV---------------TE 224 (321)
T ss_dssp HHHHHHHTTTCC------S--EEEEEESSTTTTCCSHHHHHHHHHH-HH-CCCEEEECCCEEC---------------CS
T ss_pred HHHHHHHHHHhc------C--cEEEEECCccCchhcchhhhhcccc-cc-CCCEEEEEeCccc---------------cC
Confidence 777777766543 2 8999999999996 776432 22 12 4688887664310 00
Q ss_pred eEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChh
Q 011407 268 GFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNT 347 (486)
Q Consensus 268 ~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~ 347 (486)
.. .++ +
T Consensus 225 -----------------------------------~~------~~~----------~----------------------- 230 (321)
T 3cpx_A 225 -----------------------------------GV------EAG----------K----------------------- 230 (321)
T ss_dssp -----------------------------------SS------CTT----------S-----------------------
T ss_pred -----------------------------------Cc------ccC----------C-----------------------
Confidence 00 000 0
Q ss_pred hHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-
Q 011407 348 SFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE- 426 (486)
Q Consensus 348 ~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~- 426 (486)
| +.+.+.. . ...+.++++.+++++++ .|.+... ....+|+||.+.+..
T Consensus 231 --------------------G--~~i~~~~-----~--~~~~~~l~~~~~~~a~~-~gi~~q~-~~~~~GGsD~~~~~~s 279 (321)
T 3cpx_A 231 --------------------G--VAISMRD-----R--MIPRKKYVNRIIELARQ-TDIPFQL-EVEGAGASDGRELQLS 279 (321)
T ss_dssp --------------------C--EEEEEES-----S--SCCCHHHHHHHHHHHTT-SSCCEEE-EECSSCCCHHHHHHHS
T ss_pred --------------------C--cEEEECC-----C--CCCCHHHHHHHHHHHHH-cCCCEEE-EeCCCCCccHHHHHHh
Confidence 1 1122221 1 23588899999999988 4876532 123778999998843
Q ss_pred --hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHH
Q 011407 427 --VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAER 473 (486)
Q Consensus 427 --~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~ 473 (486)
.+|++. +|++.. .+|+++|+++++++...++++..++.+
T Consensus 280 ~~Gipt~~--lG~~~~------~~Hs~~E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 280 PYPWDWCF--IGAPEK------DAHTPNECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp SSCCBCCB--EECEEB------STTSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEE--Echhhc------ccchhhhheeHHHHHHHHHHHHHHHHh
Confidence 488874 566653 499999999999999999999998865
No 40
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.67 E-value=1.2e-16 Score=156.92 Aligned_cols=134 Identities=13% Similarity=0.067 Sum_probs=110.4
Q ss_pred hHHHHHHHHHHhhhCCCCCC--------ChHHHHHHHHHHHHhCCCceEecCC------CceEEEEEcCC-CCcEEEEEe
Q 011407 96 TVDWLKSVRRTIHQNPELAF--------QEFETSRLLRAELDRMEIGYKYPLA------KTGIRAWVGTG-GPPFVALRA 160 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~--------~E~~~a~~l~~~L~~~G~~v~~~~~------~~nvia~~g~~-~~~~ill~g 160 (486)
..+++++++++|++|||+++ .|.++++||+++|+++|++++.+.. +.||++++++. ++++|+|.+
T Consensus 5 ~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~a 84 (284)
T 1tkj_A 5 PLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGA 84 (284)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEe
Confidence 36789999999999999986 6889999999999999999876421 46999999543 458999999
Q ss_pred ccCcccCcCCCCCcccccCCCeeeecCc-h--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCC-
Q 011407 161 DMDALPIQEAVEWEYKSKVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGA- 235 (486)
Q Consensus 161 H~DtVP~~~~~~~p~~~~~dG~l~GrG~-~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~- 235 (486)
|+|+||. |+|+ | ++++++|.+++.|++.+.+++++|.|+|+++||.|. |++.++++..
T Consensus 85 H~D~v~~-----------------g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~ 147 (284)
T 1tkj_A 85 HLDSVSS-----------------GAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPS 147 (284)
T ss_dssp ECCCCTT-----------------SCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCH
T ss_pred ecCCCCC-----------------CCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhCcc
Confidence 9999994 4666 3 789999999999999888899999999999999987 9999888632
Q ss_pred --CccccEEEEEe
Q 011407 236 --LEDVEAIFAVH 246 (486)
Q Consensus 236 --~~~~d~~i~~~ 246 (486)
.+++++++.++
T Consensus 148 ~~~~~~~~~i~~D 160 (284)
T 1tkj_A 148 ADRSKLAGYLNFD 160 (284)
T ss_dssp HHHTTEEEEEEEC
T ss_pred chhhcEEEEEEec
Confidence 12455666554
No 41
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.60 E-value=3e-15 Score=147.99 Aligned_cols=129 Identities=11% Similarity=0.155 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHhhhCCC---CCCChHHHHHHHHHHHHhCC--Cc-eEecC------CCceEEEEEcC-C-CCcEEEEEec
Q 011407 96 TVDWLKSVRRTIHQNPE---LAFQEFETSRLLRAELDRME--IG-YKYPL------AKTGIRAWVGT-G-GPPFVALRAD 161 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs---~s~~E~~~a~~l~~~L~~~G--~~-v~~~~------~~~nvia~~g~-~-~~~~ill~gH 161 (486)
..+++++++++|+++|+ .++.|.++++||.++|+++| ++ ++.+. .+.||++++.+ + +.++|+|.||
T Consensus 18 ~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH 97 (299)
T 1rtq_A 18 DASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGH 97 (299)
T ss_dssp CHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEec
Confidence 36889999999999994 46678899999999999987 33 33221 24799999943 3 3578999999
Q ss_pred cCcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHc
Q 011407 162 MDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMAD 233 (486)
Q Consensus 162 ~DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~ 233 (486)
+||||. .|+ ++.+||+|+. ++++++|.+++.|++.+.+++++|.|+|+++||.|. |++.++++
T Consensus 98 ~D~v~~----~~~-----~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 164 (299)
T 1rtq_A 98 LDSTIG----SHT-----NEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQ 164 (299)
T ss_dssp CCCCSS----TTC-----CTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred cccCCC----cCc-----CCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCchhHHHHHHh
Confidence 999982 343 2578999994 889999999999999888899999999999999997 99888775
No 42
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.60 E-value=6.3e-14 Score=141.34 Aligned_cols=246 Identities=19% Similarity=0.127 Sum_probs=165.8
Q ss_pred HHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcC-C-CCcEEEEEeccCcccC------cCC
Q 011407 99 WLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-G-GPPFVALRADMDALPI------QEA 170 (486)
Q Consensus 99 ~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~-~-~~~~ill~gH~DtVP~------~~~ 170 (486)
++++++++|+++||+|++|.++++||+++|+++|++++.+ ...|+++++++ + ++|.|+|.||||+|+. .++
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D-~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G 82 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTD-GLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDG 82 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEEC-CCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCC
Confidence 5789999999999999999999999999999999998764 46799999844 3 4689999999999983 110
Q ss_pred -------CCC-c-----------------cc-------------------------------------------------
Q 011407 171 -------VEW-E-----------------YK------------------------------------------------- 176 (486)
Q Consensus 171 -------~~~-p-----------------~~------------------------------------------------- 176 (486)
-+| | +.
T Consensus 83 ~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~ 162 (355)
T 3kl9_A 83 TFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIV 162 (355)
T ss_dssp CEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEE
T ss_pred EEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEE
Confidence 011 0 00
Q ss_pred --c----cC-CCeeeecCch--HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcCCCccccEEEEEe
Q 011407 177 --S----KV-AGKMHACGHD--AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADGALEDVEAIFAVH 246 (486)
Q Consensus 177 --~----~~-dG~l~GrG~~--g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~ 246 (486)
+ .. ++++.++.-| .++++++.+++.+++. .++.++.++|+..||.|. |+...... + .+|.+|++|
T Consensus 163 ~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~--~-~pd~~i~~D 237 (355)
T 3kl9_A 163 PDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK--F-DPEVFLAVD 237 (355)
T ss_dssp ECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEE
T ss_pred eccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc--c-CCCEEEEec
Confidence 0 00 1234455544 5667777777777653 578999999999999997 66554432 2 356655444
Q ss_pred cCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCC-CCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecC
Q 011407 247 VSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN-PHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG 325 (486)
Q Consensus 247 ~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~-p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG 325 (486)
.+ |+.. |. . . .
T Consensus 238 ~~-------------------------------~a~d~p~--~-------------~-------~--------------- 249 (355)
T 3kl9_A 238 CS-------------------------------PAGDVYG--G-------------Q-------G--------------- 249 (355)
T ss_dssp EE-------------------------------ECCGGGT--S-------------S-------C---------------
T ss_pred Cc-------------------------------cCCCCCC--c-------------c-------c---------------
Confidence 21 1111 11 0 0 0
Q ss_pred ccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Q 011407 326 DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLG 405 (486)
Q Consensus 326 ~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G 405 (486)
+.|..+.+.... . ....+..+++.+++++++ .|
T Consensus 250 ----------------------------------------~lg~G~~i~~~d---~---~~~~~~~l~~~l~~~a~~-~g 282 (355)
T 3kl9_A 250 ----------------------------------------KIGDGTLIRFYD---P---GHLLLPGMKDFLLTTAEE-AG 282 (355)
T ss_dssp ----------------------------------------CTTSCEEEEEEE---T---TEECCHHHHHHHHHHHHH-TT
T ss_pred ----------------------------------------ccCCCcEEEEec---C---CCCCCHHHHHHHHHHHHH-cC
Confidence 001111121211 1 123477888888888888 47
Q ss_pred CCcccccCCCcccchHHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHH
Q 011407 406 PMNYRVVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 475 (486)
Q Consensus 406 ~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l 475 (486)
.+... ....|+||++.++. .+|++.++++.. ..|++.|+++++++..+++++..++.++-
T Consensus 283 Ip~q~--~~~ggGtDa~~i~~a~~Gipt~~igvp~~--------~~Hs~~E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 283 IKYQY--YCGKGGTDAGAAHLKNGGVPSTTIGVCAR--------YIHSHQTLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp CCEEE--EECSSCCTHHHHTTSTTCCCEEEEEEEEB--------SCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEE--ECCCcchHHHHHHHhCCCCCEEEEccCcC--------CCCCcceEeeHHHHHHHHHHHHHHHHHhC
Confidence 75542 33458999998864 488877555443 39999999999999999999999987653
No 43
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.51 E-value=3.5e-13 Score=133.49 Aligned_cols=131 Identities=17% Similarity=0.069 Sum_probs=102.6
Q ss_pred HHHHHHHHHHhhhCC---CCCCChHHHHHHHHHHHHhCCCceEecC-------C----CceEEEEEcCCCCcEEEEEecc
Q 011407 97 VDWLKSVRRTIHQNP---ELAFQEFETSRLLRAELDRMEIGYKYPL-------A----KTGIRAWVGTGGPPFVALRADM 162 (486)
Q Consensus 97 ~~~l~~ll~~lv~iP---s~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~----~~nvia~~g~~~~~~ill~gH~ 162 (486)
.+++++.+++|.++. ..+..+.++++||.++|+++|++++.+. + ..||++++++.+.+.|+|.+|+
T Consensus 24 ~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~ 103 (309)
T 3tc8_A 24 ADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHW 103 (309)
T ss_dssp HHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEecc
Confidence 456666677776653 3355678999999999999999986531 1 3799999965556899999999
Q ss_pred CcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC--------------
Q 011407 163 DALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-------------- 225 (486)
Q Consensus 163 DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-------------- 225 (486)
|+||.++. .|+. .++|++| +|++ ++++++|.+++.|++.+ ++++|.|+|..+||.|.
T Consensus 104 Dsv~~~~~--~p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~ 177 (309)
T 3tc8_A 104 DSRPYSDH--DPDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCL 177 (309)
T ss_dssp CCCSCCTT--CSSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCH
T ss_pred cCCCCCCC--Cccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccch
Confidence 99997542 4554 3467777 8884 78999999999999874 88999999999999863
Q ss_pred cHHHHHHc
Q 011407 226 GAKRMMAD 233 (486)
Q Consensus 226 G~~~l~~~ 233 (486)
|++.+.+.
T Consensus 178 GS~~~~~~ 185 (309)
T 3tc8_A 178 GTQFWAKN 185 (309)
T ss_dssp HHHHHHHS
T ss_pred hHHHHHhC
Confidence 78888775
No 44
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.48 E-value=1.2e-12 Score=131.73 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=59.6
Q ss_pred HHHHHHHHhhhCCCCCCChH-HHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcccC
Q 011407 99 WLKSVRRTIHQNPELAFQEF-ETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPI 167 (486)
Q Consensus 99 ~l~~ll~~lv~iPs~s~~E~-~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~ 167 (486)
.+++++++|+++||+|++|. ++++||+++|+++|++++.+ ...|+++++++. +|+|+|.||||+|+.
T Consensus 10 ~~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D-~~GNvi~~~~g~-~~~v~l~aHmDtVg~ 77 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGS-SPRIMVAAHMDKIGV 77 (354)
T ss_dssp CCHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEEC-TTCCEEEEECCS-SSEEEEECCCCBCEE
T ss_pred HHHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEc-CCCeEEEEEcCC-CCEEEEEecccccce
Confidence 46889999999999999999 99999999999999988764 467999998544 489999999999983
No 45
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.44 E-value=1.3e-12 Score=129.42 Aligned_cols=132 Identities=14% Similarity=0.086 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHhhhCCC---CCCChHHHHHHHHHHHHhCCCceEecC-------C----CceEEEEEcCCCCcEEEEEec
Q 011407 96 TVDWLKSVRRTIHQNPE---LAFQEFETSRLLRAELDRMEIGYKYPL-------A----KTGIRAWVGTGGPPFVALRAD 161 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs---~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~----~~nvia~~g~~~~~~ill~gH 161 (486)
..+++++.+++|+++++ -+..+.++++||.++|+++|++++.+. + ..||++++++.+.+.|+|.+|
T Consensus 25 ~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH 104 (314)
T 3gux_A 25 DADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAH 104 (314)
T ss_dssp CHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEE
T ss_pred CHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEcc
Confidence 35777888888888863 234678999999999999999886431 1 379999996554689999999
Q ss_pred cCcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-------------
Q 011407 162 MDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN------------- 225 (486)
Q Consensus 162 ~DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~------------- 225 (486)
+|+||.++. .|+. ..++. +.+|++ ++++++|.+++.|++.+ ++++|.|+|..+||.|.
T Consensus 105 ~Dsv~~~~~--~p~~-~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~ 178 (314)
T 3gux_A 105 WDSRPYADN--DPDP-KNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTW 178 (314)
T ss_dssp CCCCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTS
T ss_pred ccCCCcCCC--Cccc-ccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCcccccccccccccccccc
Confidence 999997542 2432 22333 458884 78999999999999864 88999999999999863
Q ss_pred --cHHHHHHc
Q 011407 226 --GAKRMMAD 233 (486)
Q Consensus 226 --G~~~l~~~ 233 (486)
|++++.+.
T Consensus 179 ~~GS~~~~~~ 188 (314)
T 3gux_A 179 CLGSQYWART 188 (314)
T ss_dssp CHHHHHHHHS
T ss_pred chhHHHHHhC
Confidence 77887775
No 46
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.43 E-value=6.5e-13 Score=132.97 Aligned_cols=136 Identities=14% Similarity=0.216 Sum_probs=104.2
Q ss_pred HHHHHHHhcCcchHHHH-HHHHHHhhhCCCCC-CChHHHHHHHHHHHHh--CCCceEecC-------C---CceEEEEEc
Q 011407 84 SKEVMELARRPETVDWL-KSVRRTIHQNPELA-FQEFETSRLLRAELDR--MEIGYKYPL-------A---KTGIRAWVG 149 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l-~~ll~~lv~iPs~s-~~E~~~a~~l~~~L~~--~G~~v~~~~-------~---~~nvia~~g 149 (486)
..++-+.+ ..+++ .+++++|+..+... ..+.++++||.++|++ .|++++.+. + ..||+++++
T Consensus 21 ~~~~~~~~----~~~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~ 96 (329)
T 2afw_A 21 LRQIAEGT----SISEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLN 96 (329)
T ss_dssp HHHHHHHC----CHHHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESS
T ss_pred HHHhhhhc----CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEEC
Confidence 44566666 36778 88899997655443 3456899999999999 999887532 1 479999995
Q ss_pred CCCCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhc--------CCCCCceEEEEee
Q 011407 150 TGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSR--------EHLLKGTVILIFQ 218 (486)
Q Consensus 150 ~~~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~--------g~~l~~~I~~~~~ 218 (486)
+.+.+.|++.||+|+||.+ .| +|++ ++|++ ++++++|.+++.|++. +.+++++|.|+|.
T Consensus 97 g~~~~~i~l~aH~Dsv~~~---~~------~~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~ 166 (329)
T 2afw_A 97 PTAKRHLVLACHYDSKYFS---HW------NNRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFF 166 (329)
T ss_dssp TTSSEEEEEEEECCCCCCC---CB------TTBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEE
T ss_pred CCCCcEEEEEEeccCCCcC---cc------cCcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEe
Confidence 5456899999999999965 23 2554 78884 8899999999999876 3578899999999
Q ss_pred cCCCC--------cC-cHHHHHHc
Q 011407 219 PAEEA--------GN-GAKRMMAD 233 (486)
Q Consensus 219 ~dEE~--------g~-G~~~l~~~ 233 (486)
.+||. |. |++.++++
T Consensus 167 ~~EE~~~~~~~~~gl~Gs~~~~~~ 190 (329)
T 2afw_A 167 DGEEAFLHWSPQDSLYGSRHLAAK 190 (329)
T ss_dssp SCCSCSSSCCSSSSCHHHHHHHHH
T ss_pred cCcccccccCCCccchhHHHHHHH
Confidence 99998 54 89888765
No 47
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.40 E-value=6.9e-12 Score=125.53 Aligned_cols=67 Identities=21% Similarity=0.282 Sum_probs=59.3
Q ss_pred HHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCccc
Q 011407 98 DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALP 166 (486)
Q Consensus 98 ~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP 166 (486)
..+.+++++|.++|++|+.|.+++++++++|+++|.+++.+ ...|++++.++ ++|+|+|.||||+|.
T Consensus 11 ~~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D-~~Gnvi~~~g~-~~~~v~l~aHmDevG 77 (343)
T 3isx_A 11 HHMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRID-GLGNLIVWKGS-GEKKVILDAHIDEIG 77 (343)
T ss_dssp SCCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEEC-TTCCEEEEECC-CSSEEEEEEECCBCE
T ss_pred HHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEECC-CCCEEEEEecccccc
Confidence 34678899999999999999999999999999999988764 45799998854 468999999999997
No 48
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.10 E-value=6.6e-10 Score=110.65 Aligned_cols=134 Identities=17% Similarity=0.165 Sum_probs=96.9
Q ss_pred HHHHHHHhcCcchHHHHHH-HHHHhhhCCCCC--CChHHHHHHHHHHHHhC--CCceEecC----------CCceEEEEE
Q 011407 84 SKEVMELARRPETVDWLKS-VRRTIHQNPELA--FQEFETSRLLRAELDRM--EIGYKYPL----------AKTGIRAWV 148 (486)
Q Consensus 84 ~~~i~~~~~~~~~~~~l~~-ll~~lv~iPs~s--~~E~~~a~~l~~~L~~~--G~~v~~~~----------~~~nvia~~ 148 (486)
..++-..+ ..+++++ +|+.| -+|-+. ..+.++++||.++|+++ |++++.+. ...||+|++
T Consensus 29 ~~~~~~~~----~~~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~ 103 (330)
T 3pb6_X 29 LRRVVGQL----DPQRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATL 103 (330)
T ss_dssp HHHHHHTC----CHHHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEES
T ss_pred HHhhcccC----CHHHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEE
Confidence 33455445 3555555 56666 344443 34678999999999999 88877532 126999999
Q ss_pred cCCCCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhc-----CCCCCceEEEEeecC
Q 011407 149 GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSR-----EHLLKGTVILIFQPA 220 (486)
Q Consensus 149 g~~~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~-----g~~l~~~I~~~~~~d 220 (486)
++...+.|++.+|+|+|+..+ |.-...|++ .+++++|.+++.|++. +.+++.+|.|+|..+
T Consensus 104 ~g~~~~~ivl~aH~Dsv~~~~-----------g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~ 172 (330)
T 3pb6_X 104 DPRAARHLTLACHYDSKLFPP-----------GSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDG 172 (330)
T ss_dssp CTTSSEEEEEEEECCCCCCCT-----------TSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESC
T ss_pred CCCCCceEEEEeccCCCCCCC-----------CCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcC
Confidence 654468999999999998422 111335553 7899999999999874 357899999999999
Q ss_pred CCC--------cC-cHHHHHHc
Q 011407 221 EEA--------GN-GAKRMMAD 233 (486)
Q Consensus 221 EE~--------g~-G~~~l~~~ 233 (486)
||. |- |++.+++.
T Consensus 173 EE~f~~w~~~~gl~GS~~~a~~ 194 (330)
T 3pb6_X 173 EEALKEWGPKDSLYGSRHLAQL 194 (330)
T ss_dssp CSCSSCCSTTSSCHHHHHHHHH
T ss_pred cccccccCCCCCCccHHHHHHH
Confidence 999 65 98888764
No 49
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.10 E-value=2.3e-09 Score=106.15 Aligned_cols=122 Identities=16% Similarity=0.144 Sum_probs=90.0
Q ss_pred HHHHHHHHHHhhhC-CCCCC--ChHHHHHHHHHHHHhCCCceEecC-------C----CceEEEEEcCCCCcEEEEEecc
Q 011407 97 VDWLKSVRRTIHQN-PELAF--QEFETSRLLRAELDRMEIGYKYPL-------A----KTGIRAWVGTGGPPFVALRADM 162 (486)
Q Consensus 97 ~~~l~~ll~~lv~i-Ps~s~--~E~~~a~~l~~~L~~~G~~v~~~~-------~----~~nvia~~g~~~~~~ill~gH~ 162 (486)
.+.+.+.++.|+++ |-+.+ ...++++||.++|+++|++++.+. + ..|||+++.+...+.|++.+|+
T Consensus 24 ~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~ 103 (309)
T 4fuu_A 24 ADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHW 103 (309)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEEC
T ss_pred HHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeec
Confidence 45667777777775 44443 346899999999999999986421 1 2599999965556899999999
Q ss_pred CcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCc
Q 011407 163 DALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG 224 (486)
Q Consensus 163 DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g 224 (486)
|++|.++.+..+.. +.....|++ .++|++|.+++.|++. +++.+|.|+|..+||.|
T Consensus 104 Ds~~~~~~~~~~~~----~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~G 162 (309)
T 4fuu_A 104 DTRPWADNDADEKN----HHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYG 162 (309)
T ss_dssp CCCSCCTTCSSGGG----TTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCC
T ss_pred CCCCCCCCcccccc----ccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccC
Confidence 99986543322211 111234553 6899999999999974 57899999999999987
No 50
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.04 E-value=2.5e-09 Score=106.80 Aligned_cols=137 Identities=18% Similarity=0.217 Sum_probs=101.3
Q ss_pred hHHHHHHHHHHhhhCCCCCCC--hHHHHHHHHHHHHhCCCceEecC-----------CCceEEEEEcCCCCcEEEEEecc
Q 011407 96 TVDWLKSVRRTIHQNPELAFQ--EFETSRLLRAELDRMEIGYKYPL-----------AKTGIRAWVGTGGPPFVALRADM 162 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~--E~~~a~~l~~~L~~~G~~v~~~~-----------~~~nvia~~g~~~~~~ill~gH~ 162 (486)
....+.++++.|. +|-+.|- ..++++||.++|+++|++++.+. ...||||++.++..+.|++.+|+
T Consensus 36 ~~~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~~~~i~l~aHy 114 (330)
T 4fai_A 36 DKLHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHY 114 (330)
T ss_dssp CHHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTCSEEEEEEEEC
T ss_pred HHHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCCCcEEEEEEee
Confidence 4567777788874 6776654 46899999999999999886431 12599999965556789999999
Q ss_pred CcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhc---CCCCCceEEEEeecCCCCcC---------cH
Q 011407 163 DALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSR---EHLLKGTVILIFQPAEEAGN---------GA 227 (486)
Q Consensus 163 DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~---g~~l~~~I~~~~~~dEE~g~---------G~ 227 (486)
|+++..+ . ...|++ .++|++|.+|+.|++. +.+++.+|.|+|..+||.|- |+
T Consensus 115 Ds~~~~~-----------~--~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS 181 (330)
T 4fai_A 115 DSKYMPG-----------V--EFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGA 181 (330)
T ss_dssp CCCCCTT-----------S--CCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHH
T ss_pred ccccccc-----------C--CCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhh
Confidence 9997432 1 123553 7899999999999753 45788999999999999872 78
Q ss_pred HHHHHc----CCCccccEEEEEe
Q 011407 228 KRMMAD----GALEDVEAIFAVH 246 (486)
Q Consensus 228 ~~l~~~----g~~~~~d~~i~~~ 246 (486)
+++.+. +..+.+.+.+.++
T Consensus 182 ~~~a~~~~~~~~~~~i~~~inlD 204 (330)
T 4fai_A 182 RHLAKKWHHEGKLDRIDMLVLLD 204 (330)
T ss_dssp HHHHHHHHHTTCSTTEEEEEEEC
T ss_pred HHHHhcchhccchhceeEEEEec
Confidence 887763 3344556666554
No 51
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.03 E-value=2.4e-09 Score=106.20 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=92.5
Q ss_pred HHHHHHHHHHhhhCCCCCCC--hHHHHHHHHHHHHhCCCceEecC-----------CCceEEEEEcCCCCcEEEEEeccC
Q 011407 97 VDWLKSVRRTIHQNPELAFQ--EFETSRLLRAELDRMEIGYKYPL-----------AKTGIRAWVGTGGPPFVALRADMD 163 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~--E~~~a~~l~~~L~~~G~~v~~~~-----------~~~nvia~~g~~~~~~ill~gH~D 163 (486)
...+-++|+.|+ +|-+.|- ..++++||.++|+++|++++.+. ...||||++.+...+.|++.+|+|
T Consensus 10 ~~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyD 88 (312)
T 4f9u_A 10 EVHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYD 88 (312)
T ss_dssp HHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEe
Confidence 345555666664 6766654 46899999999999999886431 125999999655568899999999
Q ss_pred cccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhc-----CCCCCceEEEEeecCCCCc--------C-c
Q 011407 164 ALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSR-----EHLLKGTVILIFQPAEEAG--------N-G 226 (486)
Q Consensus 164 tVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~-----g~~l~~~I~~~~~~dEE~g--------~-G 226 (486)
+++.++.. + ..|++ .++|++|.+|+.|.+. +.+++++|.|+|..+||.| - |
T Consensus 89 s~~~~~~~---------~---~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~G 156 (312)
T 4f9u_A 89 SKYFPNDP---------G---FVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYG 156 (312)
T ss_dssp CCCCTTCT---------T---CCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHH
T ss_pred cCCCCCCC---------C---CCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccC
Confidence 98753211 1 23553 7899999999999753 4568899999999999987 3 7
Q ss_pred HHHHHHc
Q 011407 227 AKRMMAD 233 (486)
Q Consensus 227 ~~~l~~~ 233 (486)
++.+.++
T Consensus 157 S~~~a~~ 163 (312)
T 4f9u_A 157 SKHLAAK 163 (312)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 7777765
No 52
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.86 E-value=2.4e-09 Score=85.52 Aligned_cols=80 Identities=18% Similarity=0.099 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHH
Q 011407 390 EDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHA 468 (486)
Q Consensus 390 ~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~ 468 (486)
+++++.++++++++ |.++ .+..++|+||+++|.. .+|++ .+||+... ...+|++||++++++|.+++++|+
T Consensus 1 ~~~v~~l~~a~~~~-g~~~--~~~~~~g~TDar~~~~~gip~v--~fGPg~~~---~~~~H~~dE~v~i~~l~~~~~iy~ 72 (88)
T 1q7l_B 1 NPWWAAFSRVCKDM-NLTL--EPEIMPAAGDNRYIRAVGVPAL--GFSPMNRT---PVLLHDHDERLHEAVFLRGVDIYT 72 (88)
T ss_dssp CHHHHHHHHHHHHT-TCCE--EEEECCSCSHHHHHHHTTCCEE--EECCCCSC---CCCTTSTTCEEEHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHc-CCee--EeeeeceeCcHHHHHHcCCCEE--EECCCCCC---cccccCCCCeeEHHHHHHHHHHHH
Confidence 36899999999997 8766 4678899999999976 47765 46888632 136999999999999999999999
Q ss_pred HHHHHHHhh
Q 011407 469 TIAERFLNE 477 (486)
Q Consensus 469 ~~i~~~l~~ 477 (486)
.++.+++..
T Consensus 73 ~~i~~~~~~ 81 (88)
T 1q7l_B 73 RLLPALASV 81 (88)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHcC
Confidence 999999875
No 53
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.48 E-value=5.3e-07 Score=92.98 Aligned_cols=105 Identities=17% Similarity=0.170 Sum_probs=75.6
Q ss_pred hCCCCCCChHHHHHHHHHHHH--hCC---CceEecC----CCceEEEEEcCC-----CCcEEEEEeccCcccCcCCCCCc
Q 011407 109 QNPELAFQEFETSRLLRAELD--RME---IGYKYPL----AKTGIRAWVGTG-----GPPFVALRADMDALPIQEAVEWE 174 (486)
Q Consensus 109 ~iPs~s~~E~~~a~~l~~~L~--~~G---~~v~~~~----~~~nvia~~g~~-----~~~~ill~gH~DtVP~~~~~~~p 174 (486)
.||..+-.. +.+++|.++|+ +.| ++++.+. ...||++++.+. +.+.|++.+|+|+|+.
T Consensus 163 ~IP~~~Is~-~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~------- 234 (421)
T 2ek8_A 163 FVAAVGITK-QEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEK------- 234 (421)
T ss_dssp CCEEEEECH-HHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTT-------
T ss_pred CccEEEeCH-HHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCC-------
Confidence 445443333 34777888883 222 2222111 146999999431 4589999999999983
Q ss_pred ccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHc
Q 011407 175 YKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMAD 233 (486)
Q Consensus 175 ~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~ 233 (486)
|+|+. ++++++|.+++.|++. +++++|.|+++.+||.|. |+..++++
T Consensus 235 ----------g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 235 ----------APGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp ----------CCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred ----------CCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 46662 7889999999999974 578999999999999987 99999886
No 54
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.41 E-value=5.4e-07 Score=93.51 Aligned_cols=99 Identities=23% Similarity=0.229 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhCC-CceEec--------CCCceEEEEEcC-C-CCcEEEEEeccCcccCcCCCCCcccccCCCeeeecC
Q 011407 119 ETSRLLRAELDRME-IGYKYP--------LAKTGIRAWVGT-G-GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACG 187 (486)
Q Consensus 119 ~~a~~l~~~L~~~G-~~v~~~--------~~~~nvia~~g~-~-~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG 187 (486)
+-++.|.+.|+.-. +.++.. ....||++++.+ . +.+.|++.+|+|+|+. |+|
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~-----------------g~G 266 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDE-----------------GTG 266 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSS-----------------SCC
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCC-----------------CCC
Confidence 55677777776421 322211 123699999954 3 3578999999999984 345
Q ss_pred ch---HHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC-cHHHHHHcC
Q 011407 188 HD---AHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN-GAKRMMADG 234 (486)
Q Consensus 188 ~~---g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~-G~~~l~~~g 234 (486)
++ ++++++|.+++.|++.+.+++++|.|+|+.+||.|. |+..++++.
T Consensus 267 a~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~ 317 (444)
T 3iib_A 267 AIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEH 317 (444)
T ss_dssp TTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHT
T ss_pred CccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhh
Confidence 52 788999999999999888899999999999999997 999998863
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=97.74 E-value=4.7e-05 Score=81.99 Aligned_cols=77 Identities=17% Similarity=0.155 Sum_probs=62.2
Q ss_pred CceEEEEEcCC--CCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCch-HHHHHHHHHHHHHHhc----CCCCCceE
Q 011407 141 KTGIRAWVGTG--GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD-AHVAMLIGAAKILKSR----EHLLKGTV 213 (486)
Q Consensus 141 ~~nvia~~g~~--~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~-g~~a~~l~aa~~L~~~----g~~l~~~I 213 (486)
-.||++++.+. +.+.|++.+|+|++.. |-..+ .+++++|.+++.|++. +.+++++|
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-----------------Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I 328 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGP-----------------GAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSI 328 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSC-----------------CTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCC-----------------CCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcE
Confidence 36999999443 4578999999999952 11122 6788999999999864 67899999
Q ss_pred EEEeecCCCCcC-cHHHHHHcC
Q 011407 214 ILIFQPAEEAGN-GAKRMMADG 234 (486)
Q Consensus 214 ~~~~~~dEE~g~-G~~~l~~~g 234 (486)
.|++..+||.|- |+..++++.
T Consensus 329 ~f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 329 IFASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEEESSGGGTSHHHHHHHHHT
T ss_pred EEEEECCcccCchhHHHHHHhh
Confidence 999999999997 999998864
No 56
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=97.70 E-value=5.4e-05 Score=82.36 Aligned_cols=75 Identities=20% Similarity=0.203 Sum_probs=61.3
Q ss_pred CceEEEEEcCC--CCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCch--HHHHHHHHHHHHHHh---cCCCCCceE
Q 011407 141 KTGIRAWVGTG--GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD--AHVAMLIGAAKILKS---REHLLKGTV 213 (486)
Q Consensus 141 ~~nvia~~g~~--~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~--g~~a~~l~aa~~L~~---~g~~l~~~I 213 (486)
-.||++++.+. +.+.|++.+|+|+++. | +.| .+++++|.+++.|.+ .|.+++++|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-----------------G-a~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I 373 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVF-----------------G-AIDPTSGVAVLQEIARSFGKLMSKGWRPRRTI 373 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSS-----------------C-TTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCC-----------------C-CccCcHHHHHHHHHHHHHHhhhhccCCCCCCE
Confidence 36999999543 4588999999999972 2 122 678899999999886 467899999
Q ss_pred EEEeecCCCCcC-cHHHHHHc
Q 011407 214 ILIFQPAEEAGN-GAKRMMAD 233 (486)
Q Consensus 214 ~~~~~~dEE~g~-G~~~l~~~ 233 (486)
.|++..+||.|- |+..++++
T Consensus 374 ~f~~~~~EE~Gl~GS~~~~~~ 394 (707)
T 3fed_A 374 IFASWDAEEFGLLGSTEWAEE 394 (707)
T ss_dssp EEEEESCGGGTSHHHHHHHHH
T ss_pred EEEEeCCccccchhHHHHHHh
Confidence 999999999997 99988875
No 57
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=87.17 E-value=2.6 Score=42.39 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=54.5
Q ss_pred CceEEEEE--cCCCCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCch---HHHHHHHHHHHHHHhcCCCCCceEEE
Q 011407 141 KTGIRAWV--GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLKGTVIL 215 (486)
Q Consensus 141 ~~nvia~~--g~~~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~---g~~a~~l~aa~~L~~~g~~l~~~I~~ 215 (486)
+..-++.+ .+...+.|+|.+|+|... +++ .++|+++..++.|++ .+++.++.|
T Consensus 165 G~l~y~e~~ipG~t~~~IllsaH~cHP~--------------------~ANDNaSG~a~lleLar~l~~--~~~~~t~rF 222 (435)
T 3k9t_A 165 GSLTYGEYYIRGELEEEILLTTYTCHPS--------------------MCNDNLSGVALITFIAKALSK--LKTKYSYRF 222 (435)
T ss_dssp CEEEEEEEEECCSSSCEEEEEEECCCCS--------------------CTTTTHHHHHHHHHHHHHHTT--SCCSSEEEE
T ss_pred CceEEEEEEecCCCCCEEEEEEEcCCCC--------------------CCCccchHHHHHHHHHHHHhc--CCCCceEEE
Confidence 45556665 444469999999999732 132 677888999999986 357899999
Q ss_pred EeecCCCCcC-cHHHHHHcCC--CccccEEEEEe
Q 011407 216 IFQPAEEAGN-GAKRMMADGA--LEDVEAIFAVH 246 (486)
Q Consensus 216 ~~~~dEE~g~-G~~~l~~~g~--~~~~d~~i~~~ 246 (486)
+|.+ |- |+..++.+.. .+.+.+.+.++
T Consensus 223 vf~p----g~iGS~~yl~~~~~~l~~i~a~lnLD 252 (435)
T 3k9t_A 223 LFAP----ETIGSITWLSRNEDKLKNIKMGLVAT 252 (435)
T ss_dssp EEEC----TTHHHHHHHHHCGGGGGGEEEEEECC
T ss_pred EEcC----ccHHHHHHHHhChHhhhceEEEEEEE
Confidence 9998 23 7777766532 23445555444
No 58
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=86.35 E-value=1.6 Score=44.62 Aligned_cols=77 Identities=14% Similarity=0.079 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccC---CCcccchHHHHHh--hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHH
Q 011407 388 NDEDMYEHVKKVAIDLLGPMNYRVVP---PMMGAEDFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 462 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~G~~~~~~~~---~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~ 462 (486)
.+......+++++++. |.+.+.... ..+||+|.+.+.. ++|++. +|...- .+|++-|-++.+++..
T Consensus 368 ~~~~~~~~~~~ia~~~-~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvd--iGiP~l------~MHS~~E~~~~~D~~~ 438 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ-GVIWQVATLGKVDQGGGGTIAKFFAERGSDVID--MGPALL------GMHSPFEISSKADLFE 438 (450)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEE--EECEEB------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEE--echhhc------ccchHHHHhhHHHHHH
Confidence 4788889999999984 876442111 2567888887754 377765 455443 3999999999999999
Q ss_pred HHHHHHHHHHH
Q 011407 463 GAAVHATIAER 473 (486)
Q Consensus 463 ~~~i~~~~i~~ 473 (486)
.++++..++.+
T Consensus 439 ~~~l~~af~~~ 449 (450)
T 2glf_A 439 TYVAYRSLMEK 449 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 59
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=84.74 E-value=8.2 Score=41.76 Aligned_cols=56 Identities=16% Similarity=0.230 Sum_probs=43.2
Q ss_pred ccc-hhhHHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCC--hHHHHHHHHHHHHhCCCc-eEe
Q 011407 78 VWS-RACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQ--EFETSRLLRAELDRMEIG-YKY 137 (486)
Q Consensus 78 ~~~-~~~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~--E~~~a~~l~~~L~~~G~~-v~~ 137 (486)
|++ .++.+.+.+.+ ..+.+.+.++.|-++|-.+|- +.+.++|+++.|++.|++ ++.
T Consensus 8 ~~~~~~l~~~~~~~~----~~~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 8 VRYHQSIRWKLVSEM----KAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp -----CHHHHHHHHC----CHHHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHhC----CHHHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 344 34566777777 356899999999999988885 578899999999999998 654
No 60
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=84.39 E-value=0.75 Score=46.83 Aligned_cols=75 Identities=12% Similarity=-0.015 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccCC---CcccchHHHHHh---hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchH
Q 011407 388 NDEDMYEHVKKVAIDLLGPMNYRVVPP---MMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLP 461 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~G~~~~~~~~~---~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~ 461 (486)
.|..+.+.+++++++. |.+.+. ... .+|++|.+.+.. .+|++. +|+... ..|++.|.++.+++.
T Consensus 343 ~~~~~~~~l~~~a~~~-~Ip~Q~-~~~~~d~~gGsd~g~i~~~~~Gi~tvd--iGip~~------~mHS~~E~~~~~D~~ 412 (428)
T 2ijz_A 343 TNSETAGFFRHLCQDS-EVPVQS-FVTRSDMGCGSTIGPITASQVGVRTVD--IGLPTF------AMHSIRELAGSHDLA 412 (428)
T ss_dssp CCHHHHTTTTHHHHHT-CCCCCB-CCCCSSCCCCCCCSTTTGGGGSCCEEE--ECCCCC------SCSSSSCCCCSSHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEE-EEEeCCCCccchHHHHHHhCCCCCEEE--Echhhc------ccchHHHHhhHHHHH
Confidence 6888999999999984 876542 222 668899888753 377664 576654 499999999999999
Q ss_pred HHHHHHHHHHH
Q 011407 462 VGAAVHATIAE 472 (486)
Q Consensus 462 ~~~~i~~~~i~ 472 (486)
..++++..++.
T Consensus 413 ~~~~ll~af~~ 423 (428)
T 2ijz_A 413 HLVKVLGAFYA 423 (428)
T ss_dssp HHHTTHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 61
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=79.07 E-value=4.3 Score=41.93 Aligned_cols=80 Identities=11% Similarity=-0.056 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccC--C-CcccchHHHHH--hhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHH
Q 011407 388 NDEDMYEHVKKVAIDLLGPMNYRVVP--P-MMGAEDFSFYS--EVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 462 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~G~~~~~~~~--~-~~g~tD~~~~~--~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~ 462 (486)
.|...+..+++++++. |.+.+.... . ..|+|+....+ .++|++.+ |...- .+|++-|-++.+++..
T Consensus 404 t~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdI--GiP~r------yMHS~~E~~~~~D~~~ 474 (496)
T 3vat_A 404 SNAVSEALIREVASSV-GVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDL--GSPQL------AMHSIRETACTTGVLQ 474 (496)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEEE--ECEEE------STTSSSEEEESHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHhcccCCcEEEe--cHhhh------ccccHHHHhhHHHHHH
Confidence 4788999999999984 876542111 1 23455543333 24787764 44432 3999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 011407 463 GAAVHATIAERFLN 476 (486)
Q Consensus 463 ~~~i~~~~i~~~l~ 476 (486)
+++++..++.++-.
T Consensus 475 ~v~Ll~af~~~~~~ 488 (496)
T 3vat_A 475 TITLFKGFFELFPS 488 (496)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHH
Confidence 99999999887654
No 62
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=77.39 E-value=20 Score=36.78 Aligned_cols=122 Identities=10% Similarity=-0.084 Sum_probs=71.4
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-------CCceEEEEE-cCCCCcEEEEEeccCcccC
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------AKTGIRAWV-GTGGPPFVALRADMDALPI 167 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~~~nvia~~-g~~~~~~ill~gH~DtVP~ 167 (486)
..-+-..+.|+|++.|.---.-...++++.+.+++.|++++..+ +-+.+++.= |+...|.++..-+. |.
T Consensus 165 ~~a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~---~~ 241 (491)
T 2hc9_A 165 DLSESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHE---VP 241 (491)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEEC---CT
T ss_pred HHHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeC---CC
Confidence 45677889999999997666777899999999999999987532 111122211 11112333333222 11
Q ss_pred cCC-------CCCcccc----cC-CCeee-ecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 168 QEA-------VEWEYKS----KV-AGKMH-ACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 168 ~~~-------~~~p~~~----~~-dG~l~-GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
++. .+..|++ .+ .+-|. -+..-++.|+.+++++++.+. .+|.||..++..-|=
T Consensus 242 ~~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 242 GSTEHIALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKH--GFSQTLHACLCIVEN 307 (491)
T ss_dssp TCSCEEEEEEEEEEEECCTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTT--TCCSEEEEEEEEEEE
T ss_pred CCCCcEEEEcCceEecCCCccCCCCcChhhccccccHHHHHHHHHHHHHHc--CCCceEEEEEEeeec
Confidence 100 1222332 11 11121 122228888999999999975 468899887776664
No 63
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=76.67 E-value=1.9 Score=44.27 Aligned_cols=76 Identities=11% Similarity=-0.042 Sum_probs=51.3
Q ss_pred CCCHHHHHHHHHHHHHhcCCCcccccC---C-CcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchH
Q 011407 387 VNDEDMYEHVKKVAIDLLGPMNYRVVP---P-MMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLP 461 (486)
Q Consensus 387 ~~d~~~v~~l~~a~~~~~G~~~~~~~~---~-~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~ 461 (486)
..|..+...+++++++. |.+.+.... . ..|+|+...+++ .+|++. +|+... ..|++.|.+..+++.
T Consensus 376 ~~~~~~~~~l~~~a~~~-~Ip~Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvd--iGiP~~------~mHS~~E~~~~~Di~ 446 (458)
T 1y7e_A 376 DADAELVSYIRQLLNKN-NIAWQVATLGKVEEGGGGTVAKFLAGYGIRTID--MGPAVI------SMHSPMEITSKFDLY 446 (458)
T ss_dssp --CHHHHHHHHHHHHHH-TCCEEEEEECC-----CHHHHHHHHHHTCEEEE--ECCEEB------STTSSSEEEEHHHHH
T ss_pred cCCHHHHHHHHHHHHHc-CCCeEEEEeeccCCCCcCcHHHHHhCCCCCEEE--Echhhc------ccchHHHHhhHHHHH
Confidence 34788999999999985 876542111 1 334554433443 377664 566654 399999999999999
Q ss_pred HHHHHHHHHH
Q 011407 462 VGAAVHATIA 471 (486)
Q Consensus 462 ~~~~i~~~~i 471 (486)
..++++..++
T Consensus 447 ~~~~ll~af~ 456 (458)
T 1y7e_A 447 NAYLAYKAFY 456 (458)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 64
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=73.80 E-value=2.1 Score=43.87 Aligned_cols=50 Identities=12% Similarity=0.059 Sum_probs=33.8
Q ss_pred CChHHHHHHHHHHHHhCCCc-------------eEecCCCceEEEEE--cCC---CCcEEEEEeccCccc
Q 011407 115 FQEFETSRLLRAELDRMEIG-------------YKYPLAKTGIRAWV--GTG---GPPFVALRADMDALP 166 (486)
Q Consensus 115 ~~E~~~a~~l~~~L~~~G~~-------------v~~~~~~~nvia~~--g~~---~~~~ill~gH~DtVP 166 (486)
.-++.+.++++++|++.||. +.. ....|.++.+ |.+ .+.. ++.+|+|.+-
T Consensus 33 pT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~-~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dspg 100 (458)
T 1y7e_A 33 KTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFY-TCREKSVAFAIIGKNPIEDGMN-FIVSHTDSPR 100 (458)
T ss_dssp CSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEEC-BCSSSCBCCEECCSSCGGGCCE-ECCCBCCCCB
T ss_pred CCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEE-ECCCCEEEEEEeCCCCCCCCcE-EEEEccCcCC
Confidence 34679999999999999986 222 2223444443 442 2345 9999999985
No 65
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=73.69 E-value=5.5 Score=41.69 Aligned_cols=81 Identities=10% Similarity=-0.103 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHHHHhc-----CCCcccccC---CCcccchHHHHH-h-hcCccEEEEccccCCCCCCCCCCCCCCcCCC
Q 011407 388 NDEDMYEHVKKVAIDLL-----GPMNYRVVP---PMMGAEDFSFYS-E-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDE 457 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~-----G~~~~~~~~---~~~g~tD~~~~~-~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i 457 (486)
.+..++..+++++++.. |.+.+.... ...|+|+....+ + ++|++.+ |...- .+|++-|.+..
T Consensus 472 tn~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdI--GiP~r------yMHS~~E~~~~ 543 (571)
T 4eme_A 472 TSPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDI--GIPQL------AMHSIREIAAV 543 (571)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEE--ECEEE------STTSSSEEEEH
T ss_pred cCHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEe--chhhh------ccchHHHHhhH
Confidence 47788899999988831 665432111 124555543333 2 4888764 44432 39999999999
Q ss_pred CchHHHHHHHHHHHHHHHh
Q 011407 458 DVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 458 ~~l~~~~~i~~~~i~~~l~ 476 (486)
.++..+++++..++.++-.
T Consensus 544 ~Dv~~~vkLl~aFl~~~~~ 562 (571)
T 4eme_A 544 HDVFFLIKGVFAFYTYYNQ 562 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHH
Confidence 9999999999999987754
No 66
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=70.31 E-value=12 Score=38.47 Aligned_cols=115 Identities=11% Similarity=0.050 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-------CCce--------------EEEEE-cCC-C
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------AKTG--------------IRAWV-GTG-G 152 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~~~n--------------via~~-g~~-~ 152 (486)
...+-+.+.|+|++.|.---.-...++++.+.+++.|++++..+ +-+. ++.+| |++ .
T Consensus 195 ~~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 274 (515)
T 3kzw_A 195 SIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKD 274 (515)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSS
T ss_pred HHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCC
Confidence 56678889999999998767777889999999999999987531 1111 22233 222 1
Q ss_pred CcEEEEEeccCcccCcCCCCCcccc----cCCC-eee-ecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 153 PPFVALRADMDALPIQEAVEWEYKS----KVAG-KMH-ACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 153 ~~~ill~gH~DtVP~~~~~~~p~~~----~~dG-~l~-GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
.++|.|.|- +..|++ .+.+ -|. -+..-++.|+.+++++++.+.+ +|.||..+....|=
T Consensus 275 ~~~i~LVGK----------GiTFDsGG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 275 EAPIALVGK----------GITYDSGGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAEN 338 (515)
T ss_dssp CCCEEEEEE----------EEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEE
T ss_pred CCcEEEecC----------ceEEecCCcCCCCccChhhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 233444331 122221 1110 111 1212278889999999999864 67898877766654
No 67
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=69.96 E-value=14 Score=34.93 Aligned_cols=88 Identities=15% Similarity=0.034 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEcccc-------------CCCCCCCCCCCCCCc
Q 011407 389 DEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKN-------------ETLGSIHTGHSPYFM 454 (486)
Q Consensus 389 d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~-------------~~~~~~~~~H~~dE~ 454 (486)
++.+.+.+.+..++ .|..... .....+++|...|.+ ++|++.+..+... .........|++...
T Consensus 175 ~~~l~~~~~~~~~~-~gi~~~~-~~~~~~~sD~~~f~~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~ 252 (284)
T 1tkj_A 175 DPVIEKTFKNYFAG-LNVPTEI-ETEGDGRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDS 252 (284)
T ss_dssp SHHHHHHHHHHHHH-HTCCCEE-CCSSTTCSTHHHHHHTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCS
T ss_pred CHHHHHHHHHHHHH-cCCCccc-CCCCCCCCchHHHHHCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCC
Confidence 55667777777766 4765432 122345688876654 6998776554100 000001348998866
Q ss_pred ---CCCCchHHHHHHHHHHHHHHHhhc
Q 011407 455 ---IDEDVLPVGAAVHATIAERFLNEY 478 (486)
Q Consensus 455 ---i~i~~l~~~~~i~~~~i~~~l~~~ 478 (486)
++.+.+...+++++.++.++...+
T Consensus 253 ~~~id~~~l~~~~~~~~~~~~~la~~~ 279 (284)
T 1tkj_A 253 LSNINDTALDRNSDAAAHAIWTLSSGT 279 (284)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred hhhCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 889999999999999998887643
No 68
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=68.82 E-value=15 Score=37.78 Aligned_cols=123 Identities=11% Similarity=0.049 Sum_probs=72.2
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCC--CceEecC-------CCceEEEEE-cCCCCcEEEEEeccCcc
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRME--IGYKYPL-------AKTGIRAWV-GTGGPPFVALRADMDAL 165 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G--~~v~~~~-------~~~nvia~~-g~~~~~~ill~gH~DtV 165 (486)
...+-+.+.|+|++-|.---.-...+++..+.+++.| ++++..+ +-+.+++.= |+...|.++..-+.-.-
T Consensus 159 ~~a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~ 238 (484)
T 1lam_A 159 LFASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSP 238 (484)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSS
T ss_pred HHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCC
Confidence 4677889999999999876677788999999999999 8887531 111222211 12222333333221000
Q ss_pred -----c---CcCCCCCcccc----cC--CCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 166 -----P---IQEAVEWEYKS----KV--AGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 166 -----P---~~~~~~~p~~~----~~--dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
| +| .+..|++ .+ .+.-.-+..-++.|+.+++++++.+.+ +|.||..++..-|=
T Consensus 239 ~~~~~~i~LVG--KGITFDsGG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--l~vnv~~~i~~~EN 305 (484)
T 1lam_A 239 NASEPPLVFVG--KGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLD--LPINIVGLAPLCEN 305 (484)
T ss_dssp STTSCCEEEEE--CEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCCCCcEEEEe--cceEEcCCCcCCcCccchhhhhccchHHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 0 01 1223332 11 121111222288889999999999864 67899877776654
No 69
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=68.20 E-value=8 Score=39.44 Aligned_cols=52 Identities=17% Similarity=0.126 Sum_probs=37.5
Q ss_pred CChHHHHHHHHHHHHhCCCceE--e---cC--------CCceEEEEE-cCC-CCcEEEEEeccCccc
Q 011407 115 FQEFETSRLLRAELDRMEIGYK--Y---PL--------AKTGIRAWV-GTG-GPPFVALRADMDALP 166 (486)
Q Consensus 115 ~~E~~~a~~l~~~L~~~G~~v~--~---~~--------~~~nvia~~-g~~-~~~~ill~gH~DtVP 166 (486)
.-++.+.+++++.|++.||.-- . .+ .+.|+++.. |.. ..+.+++.+|+|-+-
T Consensus 31 ~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp~ 97 (450)
T 2glf_A 31 KTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSPR 97 (450)
T ss_dssp SSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccCC
Confidence 3468999999999999999531 0 01 136899975 432 136899999999874
No 70
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=67.15 E-value=10 Score=38.69 Aligned_cols=122 Identities=15% Similarity=0.054 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCC------CceEEEEE-cCCCCcEEEEEeccCcccCc
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLA------KTGIRAWV-GTGGPPFVALRADMDALPIQ 168 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~------~~nvia~~-g~~~~~~ill~gH~DtVP~~ 168 (486)
...+-+.+.|+|++.|.---.-...+++..+.+++.|++++..+. -+.+++.= |+...|.++..-+- |.+
T Consensus 165 ~~a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y~---~~~ 241 (482)
T 3ij3_A 165 DWLTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKWG---DIK 241 (482)
T ss_dssp HHHHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEES---CTT
T ss_pred HHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEeC---CCC
Confidence 456778899999999976666678899999999999998875311 11122211 12222443333321 111
Q ss_pred CC------CCCcccc----cCCC-eee-ecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 169 EA------VEWEYKS----KVAG-KMH-ACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 169 ~~------~~~p~~~----~~dG-~l~-GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
+. .+..|++ .+.+ -|. -+..-++.|+.+++++++.+.+ +|.||..++..-|=
T Consensus 242 ~~~i~LVGKGITFDsGGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 242 APKVTLVGKGVCFDSGGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQ--LPVRLRLLIPAVEN 305 (482)
T ss_dssp SCEEEEEECEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCeEEEEccceEeecCCccCcCccchhhccccchHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 00 1122221 1110 111 1111278889999999999864 77899888766654
No 71
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=65.54 E-value=17 Score=37.59 Aligned_cols=115 Identities=11% Similarity=0.018 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCC--CceEecC-------CCce--------------EEEEE-cCC
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRME--IGYKYPL-------AKTG--------------IRAWV-GTG 151 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G--~~v~~~~-------~~~n--------------via~~-g~~ 151 (486)
...+-+.+.|+|++-|.---.-...+++..+.+++.| ++++..+ +-+. ++-+| |.+
T Consensus 179 ~~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~ 258 (503)
T 1gyt_A 179 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA 258 (503)
T ss_dssp HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCC
Confidence 5677889999999999866667788999999999999 8887531 1111 22233 222
Q ss_pred --CCcEEEEEeccCcccCcCCCCCcccc----cC--CCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 152 --GPPFVALRADMDALPIQEAVEWEYKS----KV--AGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 152 --~~~~ill~gH~DtVP~~~~~~~p~~~----~~--dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
..++|.|.|= +..|++ .+ .+.-.-+..-++.|+.+++++++.+.+ +|.||+.+...-|=
T Consensus 259 ~~~~~~i~LVGK----------GITFDsGGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~--l~vnV~~~i~~~EN 325 (503)
T 1gyt_A 259 SEDARPIVLVGK----------GLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQ--LPINVIGVLAGCEN 325 (503)
T ss_dssp CTTCCCEEEEEE----------EEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCCCcEEEEcC----------ceEecCCCccccCCcChhhcccccchHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 1233444331 223332 11 122122222388889999999999864 67899887776664
No 72
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=65.44 E-value=1.6 Score=44.30 Aligned_cols=61 Identities=15% Similarity=0.105 Sum_probs=40.5
Q ss_pred HhhhCCCCCCChHHHHHHHHHHHHhCCCc---------------eEecCCCceEEEEE-cCC---CCcEEEEEeccCccc
Q 011407 106 TIHQNPELAFQEFETSRLLRAELDRMEIG---------------YKYPLAKTGIRAWV-GTG---GPPFVALRADMDALP 166 (486)
Q Consensus 106 ~lv~iPs~s~~E~~~a~~l~~~L~~~G~~---------------v~~~~~~~nvia~~-g~~---~~~~ill~gH~DtVP 166 (486)
+++++=.-|.-++.+.+++++.|++.||. +..+-...|+++.. |.+ ..+.+++.+|+|.+-
T Consensus 7 ~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dspg 86 (428)
T 2ijz_A 7 GLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSPC 86 (428)
T ss_dssp -CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCSE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcCC
Confidence 34444444566788899999999999982 11111236899976 533 247899999999984
No 73
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=63.47 E-value=30 Score=35.49 Aligned_cols=115 Identities=10% Similarity=-0.008 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC-CCceEecC-------CC-------------ce-EEEEE-cCC-
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM-EIGYKYPL-------AK-------------TG-IRAWV-GTG- 151 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~-G~~v~~~~-------~~-------------~n-via~~-g~~- 151 (486)
...+-+.+.|+|++.|.---.-...+++..+.+++. |++++..+ +- +- ++.+| |.+
T Consensus 178 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 257 (497)
T 3h8g_F 178 AIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKK 257 (497)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCT
T ss_pred HHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCC
Confidence 567788999999999987677778899999999998 99887531 11 11 22234 222
Q ss_pred CCcEEEEEeccCcccCcCCCCCcccc----cC--CCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 152 GPPFVALRADMDALPIQEAVEWEYKS----KV--AGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 152 ~~~~ill~gH~DtVP~~~~~~~p~~~----~~--dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
..++|.|.|- +..|++ .+ ++.-.-+..-++.|+.+++++++.+.+ +|.||..++..-|=
T Consensus 258 ~~~~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 258 ADKPFVLVGK----------GITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQ--LPVNLVCLLACAEN 322 (497)
T ss_dssp TSCCEEEEEE----------EEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCcEEEEcC----------ceEeccCCccCCCccchhhccccchHHHHHHHHHHHHHHcC--CCeEEEEEEEeecc
Confidence 1244444332 222332 11 121111222278889999999999864 67899887776654
No 74
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=61.52 E-value=5.4 Score=40.85 Aligned_cols=75 Identities=7% Similarity=-0.028 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCccc-cc--CC-CcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHH
Q 011407 388 NDEDMYEHVKKVAIDLLGPMNYR-VV--PP-MMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 462 (486)
Q Consensus 388 ~d~~~v~~l~~a~~~~~G~~~~~-~~--~~-~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~ 462 (486)
.|..+...+++++++. |.+.+. .. .. ..|+|....+++ .+|++. +|+... ..|++-|.+..+++..
T Consensus 380 ~~~~~~~~l~~ia~~~-~Ip~Q~~~~gr~d~~~GgTig~~~a~~Gi~tvd--iGiP~l------~MHS~~E~~~~~Di~~ 450 (461)
T 2glj_A 380 ANPEYIAELRRILSKE-SVNWQTAELGKVDQGGGGTIAYILAEYGMQVID--CGVALL------NMHAPWEISSKADIYE 450 (461)
T ss_dssp CCHHHHHHHHHHHHHT-CCCEEECCSSSSSSSCCCCTHHHHHTTTCBCCB--BCCEEE------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEeeeccCCCCcccHHHHHhCCCCCEEE--Echhhc------ccchHHHHhhHHHHHH
Confidence 4788899999999984 876542 11 02 234554333443 377765 466543 3999999999999999
Q ss_pred HHHHHHHHH
Q 011407 463 GAAVHATIA 471 (486)
Q Consensus 463 ~~~i~~~~i 471 (486)
.++++..++
T Consensus 451 ~~~l~~af~ 459 (461)
T 2glj_A 451 TKNGYSAFL 459 (461)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHH
Confidence 999987664
No 75
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=61.23 E-value=26 Score=35.95 Aligned_cols=115 Identities=12% Similarity=-0.017 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC-CCceEecC-------CCce--------------EEEEE-cCCC
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM-EIGYKYPL-------AKTG--------------IRAWV-GTGG 152 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~-G~~v~~~~-------~~~n--------------via~~-g~~~ 152 (486)
...+-+.+.|+|++.|.---.-...+++..+.+++. |++++..+ +-+. +..+| |.+.
T Consensus 174 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 253 (490)
T 3jru_B 174 ATAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGD 253 (490)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTT
T ss_pred HHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCC
Confidence 567788999999999987667778899999999887 98887531 1111 22233 2222
Q ss_pred CcEEEEEeccCcccCcCCCCCcccc----cC--CCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 153 PPFVALRADMDALPIQEAVEWEYKS----KV--AGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 153 ~~~ill~gH~DtVP~~~~~~~p~~~----~~--dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
.++|.|.|- +..|++ .+ ++.-.-+..-++.|+.+++++++.+.+ +|.||..++..-|=
T Consensus 254 ~~~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 317 (490)
T 3jru_B 254 ARPYVLVGK----------GITFDTGGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAE--LPINLVVVVPAVEN 317 (490)
T ss_dssp SCCEEEEEC----------EEEEECCTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCcEEEEcC----------eeEecCCCccCCCcccHhhCcccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 233444331 223332 11 121112222288889999999999864 67899877776654
No 76
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=59.91 E-value=1e+02 Score=31.66 Aligned_cols=116 Identities=12% Similarity=0.045 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-------C-------------Cce-EEEEE-cCC-C
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------A-------------KTG-IRAWV-GTG-G 152 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~-------------~~n-via~~-g~~-~ 152 (486)
...+-+.+.|+|++.|.---.-...++...+.+++.|++++..+ + .+- ++.+| +.+ .
T Consensus 203 ~~a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~ 282 (528)
T 3kr4_A 203 VYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDV 282 (528)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCC
T ss_pred HHHHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCC
Confidence 56678899999999998666677888888888899999887531 1 111 23334 222 2
Q ss_pred CcEEEEEeccCcccCcCCCCCcccc----cC--CC-eee-ecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 153 PPFVALRADMDALPIQEAVEWEYKS----KV--AG-KMH-ACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 153 ~~~ill~gH~DtVP~~~~~~~p~~~----~~--dG-~l~-GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
.++|.|.|- +..|++ .+ .| .|. -+..-++.|+.+++++++.+.+ ..+.+|..++...|=
T Consensus 283 ~~~iaLVGK----------GITFDsGG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~EN 349 (528)
T 3kr4_A 283 KKKIALVGK----------GITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVCEN 349 (528)
T ss_dssp CEEEEEEEE----------EEEEECCTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEEEE
T ss_pred CCcEEEecC----------ceEeecCCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEeecc
Confidence 345555442 223332 12 12 222 2222378889999999998875 235788877766654
No 77
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=59.68 E-value=15 Score=37.69 Aligned_cols=114 Identities=10% Similarity=-0.013 Sum_probs=70.0
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC-------CCce--------------EEEEEcC-C-CC
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------AKTG--------------IRAWVGT-G-GP 153 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~~~n--------------via~~g~-~-~~ 153 (486)
..+-+.+.|+|++.|.---.-...++++.+.+++.|++++..+ +-+. +..+|.+ + ..
T Consensus 203 ia~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~ 282 (522)
T 4efd_A 203 VATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPV 282 (522)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCS
T ss_pred HHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCC
Confidence 4567889999999998666777889999999999999987532 1111 2223322 1 12
Q ss_pred cEEEEEeccCcccCcCCCCCcccc----cCC-Ceee-ecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 154 PFVALRADMDALPIQEAVEWEYKS----KVA-GKMH-ACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 154 ~~ill~gH~DtVP~~~~~~~p~~~----~~d-G~l~-GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
++|.|.|- +..|+. .+. +-|. -+..-|+.|+.+++++++.+.+ +|.||..++...|=
T Consensus 283 ~~iaLVGK----------GITFDSGGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l~--lpvnV~~vl~~~EN 345 (522)
T 4efd_A 283 KKVSLVGK----------GIVYDCGGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRLQ--QPVQLSCTLCLAEN 345 (522)
T ss_dssp EEEEEEEE----------EEETCCCCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHHT--CSEEEEEEEEEEEC
T ss_pred CcEEEecC----------ceEeecCCccCCCccchhhcccccchHHHHHHHHHHHHHcC--CCceEEEEEEEecc
Confidence 44444332 122221 110 0111 1222278888999999999864 67899887777664
No 78
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=56.69 E-value=24 Score=36.09 Aligned_cols=115 Identities=13% Similarity=0.071 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC-CCceEecC-------CC-------------ce-EEEEE-cCC-
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM-EIGYKYPL-------AK-------------TG-IRAWV-GTG- 151 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~-G~~v~~~~-------~~-------------~n-via~~-g~~- 151 (486)
...+-+.+.|+|++.|.---.-...+++..+.+++. |++++..+ +- +- ++.+| |++
T Consensus 162 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 241 (486)
T 3pei_A 162 AIACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNE 241 (486)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCT
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCC
Confidence 567788999999999986667778899999999998 89887531 11 11 22233 211
Q ss_pred CCcEEEEEeccCcccCcCCCCCcccc----cCC--CeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 011407 152 GPPFVALRADMDALPIQEAVEWEYKS----KVA--GKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222 (486)
Q Consensus 152 ~~~~ill~gH~DtVP~~~~~~~p~~~----~~d--G~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE 222 (486)
..++|.|.|- +..|++ .+. +.-.-+..-++.|+.+++++++.+.+ +|.||..+...-|=
T Consensus 242 ~~~~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~i~~~EN 306 (486)
T 3pei_A 242 GDAPIVLVGK----------GLVFDNGGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLN--LPVNVVGVMGLAEN 306 (486)
T ss_dssp TSCCEEEEEE----------EEETEECC------------EECSHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEC
T ss_pred CCCcEEEEcc----------ceEEecCCcccCCccchhhhhccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 1234444332 223332 111 11111222278889999999999864 67899888777664
No 79
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=53.47 E-value=49 Score=31.22 Aligned_cols=87 Identities=11% Similarity=0.001 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHHHHhc-CCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCcCCCCch-----H
Q 011407 389 DEDMYEHVKKVAIDLL-GPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVL-----P 461 (486)
Q Consensus 389 d~~~v~~l~~a~~~~~-G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l-----~ 461 (486)
+..+.+.++++.++.. +.... ......+++|...|.+ ++|++..+.....+. ....|++.+.++.-+. .
T Consensus 198 ~~~l~~~l~~~a~~~~~~i~~~-~~~~~~~~sD~~~f~~~GiP~~~~~~~~~~~~---~~~yHt~~Dt~~~~d~~~~~~~ 273 (299)
T 1rtq_A 198 DSNFTQYLTQLMDEYLPSLTYG-FDTCGYACSDHASWHNAGYPAAMPFESKFNDY---NPRIHTTQDTLANSDPTGSHAK 273 (299)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEE-EECCSSCCSTHHHHHHTTCCEECEESSCGGGS---CTTTTSTTCCGGGSCTTCHHHH
T ss_pred CchHHHHHHHHHHHhCccCCcc-cCCCCCCCCcHHHHHHCCCCEEEecccccccC---CCCCCCccccccccCccHHHHH
Confidence 4566677777776632 22211 1122336789776655 699865443221110 1358999988876554 7
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 011407 462 VGAAVHATIAERFLNEYG 479 (486)
Q Consensus 462 ~~~~i~~~~i~~~l~~~~ 479 (486)
..+++++.++.++...+.
T Consensus 274 ~~~~l~~~~~~~La~~~~ 291 (299)
T 1rtq_A 274 KFTQLGLAYAIEMGSATG 291 (299)
T ss_dssp HHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 888999999988876553
No 80
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=51.29 E-value=23 Score=36.30 Aligned_cols=88 Identities=7% Similarity=-0.030 Sum_probs=56.7
Q ss_pred EEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhc---c---cCCCCCeEEEEEEEecCccCccccCeEEEEEEEe
Q 011407 269 FFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR---E---ANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLR 342 (486)
Q Consensus 269 ~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~---~---~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR 342 (486)
.+++++.+.+. |..-.+. ....+++..|...... . ...+...+.|++++.. -++++++.+++|
T Consensus 301 ~~~i~~~~~~~----~~~~~~~-~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~------~~~~~~~~~~~R 369 (490)
T 3mru_A 301 DIVTFNEEVAT----DAQVFAI-ADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITT------EENKVTVLCLIR 369 (490)
T ss_dssp CCEEEEEECCC----CCCEECH-HHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEE------ETTEEEEEEEEE
T ss_pred CeEEEEEecCC----ccccCCH-HHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEE------eCCEEEEEEEcC
Confidence 35677776544 3332232 2345555555544311 0 1111256778877753 377899999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhc
Q 011407 343 AFSNTSFYQLLQRIEEVIVEQARVF 367 (486)
Q Consensus 343 ~~p~~~~~~v~~~i~~~~~~~~~~~ 367 (486)
+++..+.+++.++++++++......
T Consensus 370 ~~~~~~~~~i~~~l~~~~~~~g~~~ 394 (490)
T 3mru_A 370 SLIDSGRSQVEGMLQSVAELAGAQI 394 (490)
T ss_dssp ESSHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCchHHHHHHHHHHHHHHHcCCeE
Confidence 9999999999999999998754433
No 81
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=50.45 E-value=18 Score=34.69 Aligned_cols=57 Identities=14% Similarity=0.085 Sum_probs=42.3
Q ss_pred cccchHHHHH-hhcCccEEEEccccCCCCCCCCCCCCC---CcCCCCchHHHHHHHHHHHHHHHhhc
Q 011407 416 MGAEDFSFYS-EVVPAAFYYIGIKNETLGSIHTGHSPY---FMIDEDVLPVGAAVHATIAERFLNEY 478 (486)
Q Consensus 416 ~g~tD~~~~~-~~~p~~~~~~G~~~~~~~~~~~~H~~d---E~i~i~~l~~~~~i~~~~i~~~l~~~ 478 (486)
.+.+|-.-|. .++|++.++.++.. ..-|+++ |+|+.+.+....+++..++.+||..+
T Consensus 241 ~~~SDH~pF~~~GIP~l~~~~~~~~------~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~~ 301 (312)
T 4f9u_A 241 LVDDDHRPFLDENVPVLHLVATPFP------DVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRH 301 (312)
T ss_dssp CCCCTTHHHHTTTCCEEEEECSSCC------TTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCchHHHHHCCCCEEEEECCCCC------CCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3456766554 46999876544332 2368877 67889999999999999999999875
No 82
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=43.70 E-value=16 Score=37.00 Aligned_cols=81 Identities=25% Similarity=0.156 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCC---CCcCCCCchHHHHHH
Q 011407 391 DMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSP---YFMIDEDVLPVGAAV 466 (486)
Q Consensus 391 ~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~---dE~i~i~~l~~~~~i 466 (486)
.+++.+.+.++. +|... ......+++|...|.+ ++|++.++..+... ....|++ -++++.+.+...+++
T Consensus 350 ~~~~~~~~~~~~-~g~~~--~~~~~~~~SD~~~f~~~GiP~~~l~~~~~~~----~~~yHt~~Dt~d~id~~~l~~~~~~ 422 (444)
T 3iib_A 350 SPVINAMKVAEP-LGVAA--GNNKASGGPDVSMLPALGVPVASLRQDGSDY----FDYHHTPNDTLDKINPEALAQNVAV 422 (444)
T ss_dssp HHHHHHGGGGGG-GTCEE--CCSCCCCCGGGTTSGGGTCCEEEEEECCTTG----GGTTTSTTCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-cCCcc--ccCCCCCCCccHHHHHCCCCEEEeecCCCcC----CCCCCCCccccccCCHHHHHHHHHH
Confidence 444444444433 35432 1345567899876655 59987665532211 1248888 478899999999999
Q ss_pred HHHHHHHHHhhc
Q 011407 467 HATIAERFLNEY 478 (486)
Q Consensus 467 ~~~~i~~~l~~~ 478 (486)
++.++..+...+
T Consensus 423 ~~~~v~~lA~~~ 434 (444)
T 3iib_A 423 YAQFAWVMANSK 434 (444)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHhcCC
Confidence 999999887654
No 83
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=43.30 E-value=27 Score=35.61 Aligned_cols=43 Identities=21% Similarity=0.251 Sum_probs=28.4
Q ss_pred CeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcC
Q 011407 181 GKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGN 225 (486)
Q Consensus 181 G~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~ 225 (486)
+.+.+++-|..+ +...++++|.+.. .++.++.++|+..||.|+
T Consensus 253 ~~I~s~~lDdr~-~~~~~l~al~~~~-~~~~~~~~~~~d~EEVGs 295 (461)
T 2glj_A 253 SMVMGYGQDDRI-CAYTSFEAMLEMK-NAKKTCITILVDKEEVGS 295 (461)
T ss_dssp CEEEETTHHHHH-HHHHHHHHHHTCC-SCSSCEEEEEECCGGGTC
T ss_pred CEEEEecchhHH-HHHHHHHHHHhhc-cCCCeEEEEEEccCCCCC
Confidence 356666666222 2233455555543 567899999999999996
No 84
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=36.82 E-value=63 Score=23.53 Aligned_cols=63 Identities=17% Similarity=0.285 Sum_probs=41.7
Q ss_pred CeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCC---HHHHHHHHHHHHHhcCCCc
Q 011407 333 DAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVND---EDMYEHVKKVAIDLLGPMN 408 (486)
Q Consensus 333 ~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d---~~~v~~l~~a~~~~~G~~~ 408 (486)
+.-++.+|+|..++...+...+++++.+..+.. -.+.+.+. ..+| .++...+.+.+++ +|...
T Consensus 15 dgqeieidirvstgkeleralqelekalaraga---rnvqitis---------aendeqakelleliarllqk-lgykd 80 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGA---RNVQITIS---------AENDEQAKELLELIARLLQK-LGYKD 80 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTC---SEEEEEEE---------CSSHHHHHHHHHHHHHHHHH-HTCSE
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccc---cceEEEEE---------ecChHHHHHHHHHHHHHHHH-hCCCc
Confidence 456889999999999999999999988876432 23444332 1122 3455666666666 47654
No 85
>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae}
Probab=33.79 E-value=40 Score=26.39 Aligned_cols=33 Identities=9% Similarity=0.110 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM 131 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~ 131 (486)
++++++++.++++.--+ .|.++|++|+++|++.
T Consensus 25 mq~~a~~~a~~al~~~~---~ek~iA~~IK~~fDkk 57 (97)
T 4ds1_A 25 LKEDILTISKDALDKYQ---LERDIAGTVKKQLDVK 57 (97)
T ss_dssp HHHHHHHHHHHHHHHCS---SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhCc
Confidence 34444444444444332 6889999999999975
No 86
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=33.70 E-value=42 Score=32.49 Aligned_cols=56 Identities=13% Similarity=0.052 Sum_probs=41.6
Q ss_pred CcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCC---CcCCCCchHHHHHHHHHHHHHHHh
Q 011407 415 MMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPY---FMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 415 ~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~d---E~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
..+.+|-..|.+ ++|+++++-.+.. ...|++. ++|+.+.+.+..+++..++.+||.
T Consensus 270 ~~~~SDH~pF~~~GIP~~~~~~~~f~------~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Eyl~ 329 (330)
T 3pb6_X 270 GSVEDDHIPFLRRGVPVLHLISTPFP------AVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLG 329 (330)
T ss_dssp CCCSCTTHHHHTTTCCEEEEECSSCC------TTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCchHhHHHCCCCEEEEEcCCCC------CCCCCCcCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 345788766654 6999876432222 2478876 678899999999999999999985
No 87
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=30.55 E-value=61 Score=32.32 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=47.7
Q ss_pred HHHHHHhcCCCcccccCCCcccchHHHHHh-hcCccEEEEccccCCCCCCCCCCCCCCc---CCCCchHHHHHHHHHHHH
Q 011407 397 KKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFM---IDEDVLPVGAAVHATIAE 472 (486)
Q Consensus 397 ~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~---i~i~~l~~~~~i~~~~i~ 472 (486)
.+..++ +|.+ . .....+++|...|.+ ++|++.+.-.+.+ ...|++... ++.+.+...+++++.++.
T Consensus 328 ~~~~~~-~~~~-~--~~~~~~~SD~~~F~~~GIP~~~~~~~~~~------~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~ 397 (421)
T 2ek8_A 328 AAASSR-LSGV-L--PYGQEGRSDHESFHALGIPAALFIHAPVE------PWYHTPNDTLDKISKEKLDNVADIVGSAVY 397 (421)
T ss_dssp HHHHHH-HTSC-C--CEEECCSSTHHHHHTTTCCEEEEEEESCC------TTTTSTTCCGGGBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-cCCC-C--CCCCCCCCccHHHHHCCCCEEEEECCcCC------CCCCCcccchhhCCHHHHHHHHHHHHHHHH
Confidence 334444 4654 2 223346788776655 6998754312222 247998876 788999999999999999
Q ss_pred HHHhhc
Q 011407 473 RFLNEY 478 (486)
Q Consensus 473 ~~l~~~ 478 (486)
++...+
T Consensus 398 ~la~~~ 403 (421)
T 2ek8_A 398 QAARPG 403 (421)
T ss_dssp HHHSSS
T ss_pred HHhCCC
Confidence 987755
No 88
>1yo3_A Dynein light chain 1; structural genomics consortium, microtub malaria, SGC, transport protein; 1.65A {Plasmodium falciparum} PDB: 1f3c_A 1f95_A 1f96_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3dvt_A 2pg1_A 3p8m_A 1pwj_A 2xqq_A 3brl_A 1re6_A 1cmi_A 3dvh_A 3dvp_A ...
Probab=30.17 E-value=51 Score=26.03 Aligned_cols=32 Identities=16% Similarity=-0.006 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC
Q 011407 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM 131 (486)
Q Consensus 97 ~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~ 131 (486)
+++.+++.++++..- ..|.++|++|+++|++.
T Consensus 31 q~~a~~~a~~Al~k~---~~ekdiA~~IK~~fDkk 62 (102)
T 1yo3_A 31 QIDAIDCANQALQKY---NVEKDIAAHIKKEFDRK 62 (102)
T ss_dssp HHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc---CcHHHHHHHHHHHHhhh
Confidence 344444444444332 36789999999999975
No 89
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=28.07 E-value=1.2e+02 Score=28.88 Aligned_cols=80 Identities=18% Similarity=0.117 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhcCCCccccc-CCCcccchHHHHHh--hcCccEEEE-ccccCCCCCCCCCCCCC---CcCCCCchHHHH
Q 011407 392 MYEHVKKVAIDLLGPMNYRVV-PPMMGAEDFSFYSE--VVPAAFYYI-GIKNETLGSIHTGHSPY---FMIDEDVLPVGA 464 (486)
Q Consensus 392 ~v~~l~~a~~~~~G~~~~~~~-~~~~g~tD~~~~~~--~~p~~~~~~-G~~~~~~~~~~~~H~~d---E~i~i~~l~~~~ 464 (486)
+++.+.+.++. +|....... ......+|-..|.+ ++|++.+.- ++... .+.....|++. |+|+.+.+....
T Consensus 222 l~~~~~~~a~~-~g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~-~~~~~~~Ht~~Dt~d~id~~~l~~~~ 299 (309)
T 3tc8_A 222 IVEMVWSAARD-LGYGKYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESK-TGFASYWHTQKDNMENIDRETLKAAG 299 (309)
T ss_dssp HHHHHHHHHHH-HTCTTTEEEEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSS-SSSCTTTTSTTCSGGGBCHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCcceeccCCCCCCCCccHHHHhcCCCCEEEEecccCccc-CCCCCCCCCCcCChhhCCHHHHHHHH
Confidence 45555555555 465331111 11223678776765 699876531 11000 00113599998 899999999999
Q ss_pred HHHHHHHHH
Q 011407 465 AVHATIAER 473 (486)
Q Consensus 465 ~i~~~~i~~ 473 (486)
++++.++++
T Consensus 300 ~~~~~~vy~ 308 (309)
T 3tc8_A 300 QTVLEVIYN 308 (309)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999988865
No 90
>3rjs_A Dynein light chain motor protein; parasite, LC8, DLC8, TGDLC8, LIG PIN, DLC1, dynll1, transport protein; 1.50A {Toxoplasma gondii} PDB: 1pwj_A 2xqq_A 1re6_A 3p8m_A 3dvt_A 2pg1_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3brl_A 3dvh_A 3dvp_A 1pwk_A 1f3c_A 1f95_A 1f96_A ...
Probab=26.83 E-value=66 Score=24.62 Aligned_cols=33 Identities=12% Similarity=0.094 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhC
Q 011407 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM 131 (486)
Q Consensus 96 ~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~ 131 (486)
++++.+++.++++.--+ .|.++|++|+++|++.
T Consensus 17 mq~~a~~~a~~al~~~~---~ek~iA~~IK~~fD~k 49 (89)
T 3rjs_A 17 LQQDAIDCANQALEKYN---IEKDIAAFIKKEFDRK 49 (89)
T ss_dssp HHHHHHHHHHHHHHHCC---SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCC---cHHHHHHHHHHHHhcc
Confidence 44455555555444332 4788999999999975
No 91
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=25.86 E-value=2.7e+02 Score=29.01 Aligned_cols=51 Identities=12% Similarity=0.121 Sum_probs=34.4
Q ss_pred CChHHHHHHHHHHHHhCCCceE-----e--cC--------CCceEEEEE-cCC--CC-c-EEEEEeccCcc
Q 011407 115 FQEFETSRLLRAELDRMEIGYK-----Y--PL--------AKTGIRAWV-GTG--GP-P-FVALRADMDAL 165 (486)
Q Consensus 115 ~~E~~~a~~l~~~L~~~G~~v~-----~--~~--------~~~nvia~~-g~~--~~-~-~ill~gH~DtV 165 (486)
.-++.+.++++++|++.||.-- + .+ ++.+++|.. |.. ++ . --++.+|.|.-
T Consensus 21 pT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP 91 (571)
T 4eme_A 21 GSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSC 91 (571)
T ss_dssp CSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCC
Confidence 3468999999999999999531 1 11 134566653 544 22 3 57889999975
No 92
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=22.30 E-value=75 Score=30.54 Aligned_cols=55 Identities=20% Similarity=0.126 Sum_probs=38.2
Q ss_pred cchHHHHH-hhcCccEEEEccccCCCCCCCCCCCCC---CcCCCCchHHHHHHHHHHHHHHHhhc
Q 011407 418 AEDFSFYS-EVVPAAFYYIGIKNETLGSIHTGHSPY---FMIDEDVLPVGAAVHATIAERFLNEY 478 (486)
Q Consensus 418 ~tD~~~~~-~~~p~~~~~~G~~~~~~~~~~~~H~~d---E~i~i~~l~~~~~i~~~~i~~~l~~~ 478 (486)
.+|-.-|. .++|++.+ ++.+.. ..-|+++ |+|+.+.+..-.+++..++.+||...
T Consensus 268 ~SDH~pF~~~GIP~l~~-i~~~~~-----~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~EyL~~~ 326 (330)
T 4fai_A 268 EDDHIPFLRRNVPILHL-IPVPFP-----SVWHTPDDNASVIDYATTDNLALIIRLFALEYLLAG 326 (330)
T ss_dssp CSTTHHHHTTTCCEEEE-CCSSCC-----TTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCchHHHHHCCCCEEEE-ECCCCC-----CCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 46766554 46998764 332221 2478877 66778888999999999999988754
No 93
>3tuf_A Stage III sporulation protein AH; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_A
Probab=22.30 E-value=1.2e+02 Score=27.06 Aligned_cols=42 Identities=10% Similarity=0.022 Sum_probs=32.3
Q ss_pred CcchHHHHHHHHHHhhhCCCCCCChHH--------------HHHHHHHHHHhCCCc
Q 011407 93 RPETVDWLKSVRRTIHQNPELAFQEFE--------------TSRLLRAELDRMEIG 134 (486)
Q Consensus 93 ~~~~~~~l~~ll~~lv~iPs~s~~E~~--------------~a~~l~~~L~~~G~~ 134 (486)
|+..+.+.++.|+.+++.+..+.++.. .-..|...|+..||.
T Consensus 92 REq~Rsk~~E~L~eII~n~n~S~eeK~eA~~ql~eLt~~~ekE~~IE~LLKAKGF~ 147 (197)
T 3tuf_A 92 LEDARSKEREELNAIVSSDDATAKEKSEAYDKMTALSEVEGTEKQLETLIKTQGYE 147 (197)
T ss_dssp HHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 578899999999999999998866532 233666677777875
No 94
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=22.26 E-value=70 Score=30.68 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=38.3
Q ss_pred cchHHHHH-hhcCccEEEEccccCCCCCCCCCCCCC---CcCCCCchHHHHHHHHHHHHHHHh
Q 011407 418 AEDFSFYS-EVVPAAFYYIGIKNETLGSIHTGHSPY---FMIDEDVLPVGAAVHATIAERFLN 476 (486)
Q Consensus 418 ~tD~~~~~-~~~p~~~~~~G~~~~~~~~~~~~H~~d---E~i~i~~l~~~~~i~~~~i~~~l~ 476 (486)
.+|-..|. .++|++.+..++.. ..-|++. ++++.+.+....+++..++.+||.
T Consensus 272 ~sDh~~F~~~GiP~~~~~~~~~~------~~yHt~~Dt~~~ld~~~l~~~~~~~~~~v~eyl~ 328 (329)
T 2afw_A 272 QDDHIPFLRRGVPVLHLIPSPFP------EVWHTMDDNEENLDESTIDNLNKILQVFVLEYLH 328 (329)
T ss_dssp CSTTHHHHTTTCCEEEECCSSCC------TTTTSTTCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHhHHHCCCCEEEEEcCCCC------CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 47766554 46998765444322 2478876 567788899999999999999985
No 95
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=21.12 E-value=2.3e+02 Score=29.05 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=34.6
Q ss_pred CCChHHHHHHHHHHHHhCCCceE-----e--cC--------CCceEEEEE-cCC--C-CcEEEEEeccCcc
Q 011407 114 AFQEFETSRLLRAELDRMEIGYK-----Y--PL--------AKTGIRAWV-GTG--G-PPFVALRADMDAL 165 (486)
Q Consensus 114 s~~E~~~a~~l~~~L~~~G~~v~-----~--~~--------~~~nvia~~-g~~--~-~~~ill~gH~DtV 165 (486)
|.-++.+.+++++.|++.||.-- + .+ ++.+++|.. ++. . ..--++.+|.|.-
T Consensus 49 spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDSP 119 (496)
T 3vat_A 49 SPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSP 119 (496)
T ss_dssp CSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccCC
Confidence 44578999999999999999631 1 11 123567653 443 1 2456889999974
Done!