BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011408
(486 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q949Y0|UBP6_ARATH Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana
GN=UBP6 PE=1 SV=1
Length = 482
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/486 (78%), Positives = 424/486 (87%), Gaps = 4/486 (0%)
Query: 1 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSML 60
M TVSVKWQK+V +EID S PYVFK QLYDLTGVPPERQKIMVKGGLLKDD DW+ +
Sbjct: 1 MPTVSVKWQKKVLDGIEIDVSLPPYVFKAQLYDLTGVPPERQKIMVKGGLLKDDGDWAAI 60
Query: 61 GVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQ 120
GVK GQ+LMMMGTADEIVKAPEK VF EDLPEE +LG+SAGL NLGNTCYMNST+Q
Sbjct: 61 GVKDGQKLMMMGTADEIVKAPEKAIVFAEDLPEEALATNLGYSAGLVNLGNTCYMNSTVQ 120
Query: 121 CLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRK 180
CL SVPELKSAL YS + RSNDVDQ+SHMLTVAT ELF +LD+SV V+P QFWM+LRK
Sbjct: 121 CLKSVPELKSALSNYSLAARSNDVDQTSHMLTVATRELFGELDRSVNAVSPSQFWMVLRK 180
Query: 181 KYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQ 240
KYPQF QL NG MQQDAEECWTQLLYTLSQSL++ +SE D VKALFG+++ SR+HCQ
Sbjct: 181 KYPQFSQLQNGMHMQQDAEECWTQLLYTLSQSLKAPTSSEGADAVKALFGVNLQSRLHCQ 240
Query: 241 ESGEESSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESCINGL 300
ESGEESSETES+Y+LKCHISHEVNHLHEGLKHGLK ELEK SPALGR+A+Y+KES I+ L
Sbjct: 241 ESGEESSETESVYSLKCHISHEVNHLHEGLKHGLKGELEKTSPALGRTALYVKESLIDSL 300
Query: 301 PRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDEEGK 360
PRYLT+QFVRFFWKRESNQKAKILRKVDYPL LD++D CS+DLRKKL+APRQKLR+EEGK
Sbjct: 301 PRYLTVQFVRFFWKRESNQKAKILRKVDYPLVLDIFDLCSEDLRKKLEAPRQKLREEEGK 360
Query: 361 KLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQDGVTTDTDKETHLTGIYDLV 420
KLGL+ K S SKD+DVKMT+AE SA NGSGESS + Q+G T ++KETH+TGIYDLV
Sbjct: 361 KLGLQTSAK-SGSKDSDVKMTDAEASA-NGSGESSTVNPQEG--TSSEKETHMTGIYDLV 416
Query: 421 AVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYK 480
AVLTHKGRSADSGHYVAWVKQESGKWI+YDDDNP QREEDITKLSGGGDWHMAYI MYK
Sbjct: 417 AVLTHKGRSADSGHYVAWVKQESGKWIQYDDDNPSMQREEDITKLSGGGDWHMAYITMYK 476
Query: 481 ARSISM 486
AR +SM
Sbjct: 477 ARFVSM 482
>sp|Q84WC6|UBP7_ARATH Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabidopsis thaliana
GN=UBP7 PE=1 SV=1
Length = 477
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/486 (77%), Positives = 426/486 (87%), Gaps = 9/486 (1%)
Query: 1 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSML 60
MLTVSVKWQK+VF ++EIDTSQ P+VFK QLYDL+GVPPERQKIMVKGGLLKDD+DWS L
Sbjct: 1 MLTVSVKWQKKVFESIEIDTSQPPFVFKAQLYDLSGVPPERQKIMVKGGLLKDDADWSTL 60
Query: 61 GVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQ 120
G+K GQ+LMMMGTADEIVKAPEKGPVF+EDLPEE+Q +LG+SAGL NLGNTCYMNST+Q
Sbjct: 61 GLKNGQKLMMMGTADEIVKAPEKGPVFMEDLPEEQQAANLGYSAGLVNLGNTCYMNSTMQ 120
Query: 121 CLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRK 180
CL SVPELKS L Y QS R+ DVDQ+SHMLTVAT ELF++LDKSVK VAPM FWM+L+K
Sbjct: 121 CLISVPELKSELSNY-QSARTKDVDQTSHMLTVATRELFSELDKSVKAVAPMPFWMVLQK 179
Query: 181 KYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQ 240
KYPQF QLHNG MQQDAEECWTQ+LYTLSQSL+ + SE PD VKALFG+++++R+HCQ
Sbjct: 180 KYPQFAQLHNGNHMQQDAEECWTQMLYTLSQSLKLPSPSEDPDAVKALFGLNLLNRLHCQ 239
Query: 241 ESGEESSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESCINGL 300
ES EESSETES+++LKCHISHEVNHLHEGLKHGLK ELEK SP+LGR+AVY+KES I+ L
Sbjct: 240 ESSEESSETESVFSLKCHISHEVNHLHEGLKHGLKGELEKTSPSLGRTAVYVKESLIDSL 299
Query: 301 PRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDEEGK 360
PRYLT+QFVRFFWKRESNQKAKILRKVDYPLELD+YD CS+DLRKKL+APRQKLRD EG+
Sbjct: 300 PRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDIYDLCSEDLRKKLEAPRQKLRDIEGQ 359
Query: 361 KLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQDGVTTDTDKETHLTGIYDLV 420
KLGL+ KSS SK +DVKMT+AEGS SN SGESS Q+G + H+TGIYDLV
Sbjct: 360 KLGLQASAKSS-SKGDDVKMTDAEGS-SNQSGESSTGDQQEGAS------PHMTGIYDLV 411
Query: 421 AVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYK 480
+VLTHKGRSADSGHYVAWVKQESGKW++YDD N QR EDI KLSGGGDWHMAYI MYK
Sbjct: 412 SVLTHKGRSADSGHYVAWVKQESGKWVQYDDANTSLQRGEDIIKLSGGGDWHMAYIVMYK 471
Query: 481 ARSISM 486
AR ISM
Sbjct: 472 ARLISM 477
>sp|Q0IIF7|UBP14_BOVIN Ubiquitin carboxyl-terminal hydrolase 14 OS=Bos taurus GN=USP14
PE=2 SV=3
Length = 494
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/507 (41%), Positives = 300/507 (59%), Gaps = 43/507 (8%)
Query: 1 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSML 60
+ +V+VKW KE F VE++T + P VFK QL+ LTGV P RQK+MVKGG LKDD DW +
Sbjct: 3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNI 61
Query: 61 GVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQ 120
+K G ++MMG+AD + + P VFVED+ EE+ ++ GL NLGNTCYMN+T+Q
Sbjct: 62 KMKNGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQ 121
Query: 121 CLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRK 180
C+ SVPELK AL +Y+ + R++ S+ +T A +LF+ +DK+ + P+ L
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHM 181
Query: 181 KYPQFGQL-HNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDT--------------- 224
+PQF + G ++QQDA ECW Q++ L Q L ++ + +T
Sbjct: 182 AFPQFAEKGEQGQYLQQDANECWVQMMRVLQQKLEAIEDDTVKETDSSSASAVTPSKKKS 241
Query: 225 -VKALFGIDIVSRVHCQESGEE--SSETESIYALKCHISHEVNHLHEGLKHGLKSELEKA 281
+ FG++ + + C ES EE + ES L C I+ EV +L GLK L+ E+ K
Sbjct: 242 LIDQFFGVEFETTMKCTESEEEEVTKGKESQLQLSCFINQEVKYLFTGLKLRLQEEITKQ 301
Query: 282 SPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSD 341
SP L R+A+Y+K S I+ LP YLTIQ VRFF+K + + AK+L+ V +PL LDVY+ C+
Sbjct: 302 SPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTP 361
Query: 342 DLRKKLDAPRQKLRDEEGKKLGL--KGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASS 399
+L++K+ + R K +D E KK+ K G+K S S +VK + GS
Sbjct: 362 ELQEKMVSFRSKFKDLEDKKVNQQPKTGDKDS-SPQKEVKYEPFSFADDIGSNN------ 414
Query: 400 QDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPLPQRE 459
G YDL AVLTH+GRS+ SGHYV+WVK++ +WI++DDD
Sbjct: 415 --------------CGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTP 460
Query: 460 EDITKLSGGGDWHMAYICMYKARSISM 486
EDI +LSGGGDWH+AY+ +Y R + +
Sbjct: 461 EDILRLSGGGDWHIAYVLLYGPRRVEI 487
>sp|Q9JMA1|UBP14_MOUSE Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus GN=Usp14
PE=1 SV=3
Length = 493
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/505 (40%), Positives = 297/505 (58%), Gaps = 40/505 (7%)
Query: 1 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSML 60
+ +V+VKW KE F VE++T + P VFK QL+ LTGV P RQK+MVKGG LKDD DW +
Sbjct: 3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNI 61
Query: 61 GVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQ 120
+K G ++MMG+AD + + P VFVED+ EE+ ++ GL NLGNTCYMN+T+Q
Sbjct: 62 KMKNGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLATAMELPCGLTNLGNTCYMNATVQ 121
Query: 121 CLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRK 180
C+ SVPELK AL +Y+ + R++ S+ +T A +LF+ +DK+ + P+ L
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHM 181
Query: 181 KYPQFGQL-HNGTFMQQDAEECWTQLLYTLSQSL--------RSVNASEIPDT------- 224
+PQF + G ++QQDA ECW Q++ L Q L R ++S P
Sbjct: 182 AFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSGRETDSSSAPAVTPSKKKS 241
Query: 225 -VKALFGIDIVSRVHCQESGEE--SSETESIYALKCHISHEVNHLHEGLKHGLKSELEKA 281
+ FG++ + + C ES EE + E+ L C I+ EV +L GLK L+ E+ K
Sbjct: 242 LIDQYFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQ 301
Query: 282 SPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSD 341
SP L R+A+Y+K S I+ LP YLTIQ VRFF+K + + AK+L+ V +PL LDVY+ C+
Sbjct: 302 SPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTP 361
Query: 342 DLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQD 401
+L++K+ + R K +D E KK+ + NS ++K + GS
Sbjct: 362 ELQEKMVSFRSKFKDLEDKKVNQQPNANDKNSPPKEIKYEPFSFADDIGSNN-------- 413
Query: 402 GVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPLPQREED 461
G YDL AVLTH+GRS+ SGHYV+WV+++ +WI++DDD ED
Sbjct: 414 ------------CGYYDLQAVLTHQGRSSSSGHYVSWVRRKQDEWIKFDDDKVSIVTPED 461
Query: 462 ITKLSGGGDWHMAYICMYKARSISM 486
I +LSGGGDWH+AY+ +Y R + +
Sbjct: 462 ILRLSGGGDWHIAYVLLYGPRRVEI 486
>sp|P60051|UBP14_PANTR Ubiquitin carboxyl-terminal hydrolase 14 OS=Pan troglodytes
GN=USP14 PE=3 SV=2
Length = 493
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/505 (40%), Positives = 301/505 (59%), Gaps = 39/505 (7%)
Query: 1 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSML 60
+ +V+VKW KE F VE++T + P VFK QL+ LTGV P RQK+MVKGG LKDD DW +
Sbjct: 3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNI 61
Query: 61 GVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQ 120
+K G L+MMG+AD + + P VFVED+ EE+ ++ GL NLGNTCYMN+T+Q
Sbjct: 62 KIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQ 121
Query: 121 CLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRK 180
C+ SVPELK AL +Y+ + R++ S+ +T A +LF+ +DK+ + P+ L
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHM 181
Query: 181 KYPQFGQL-HNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDT--------------- 224
+PQF + G ++QQDA ECW Q++ L Q L ++ + +T
Sbjct: 182 AFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKS 241
Query: 225 -VKALFGIDIVSRVHCQESGEE--SSETESIYALKCHISHEVNHLHEGLKHGLKSELEKA 281
+ FG++ + + C ES EE + E+ L C I+ EV +L GLK L+ E+ K
Sbjct: 242 LIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQ 301
Query: 282 SPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSD 341
SP L R+A+Y+K S I+ LP YLTIQ VRFF+K + + AK+L+ V +PL LD+Y+ C+
Sbjct: 302 SPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTP 361
Query: 342 DLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQD 401
+L++K+ + R K +D E KK+ N + N T + S+ + S D
Sbjct: 362 ELQEKMVSFRSKFKDLEDKKV---------NQQPN----TSDKKSSPQKEVKYEPFSFAD 408
Query: 402 GVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPLPQREED 461
+ ++ G YDL AVLTH+GRS+ SGHYV+WVK++ +WI++DDD ED
Sbjct: 409 DIGSNN------CGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPED 462
Query: 462 ITKLSGGGDWHMAYICMYKARSISM 486
I +LSGGGDWH+AY+ +Y R + +
Sbjct: 463 ILRLSGGGDWHIAYVLLYGPRRVEI 487
>sp|P54578|UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14
PE=1 SV=3
Length = 494
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/505 (40%), Positives = 301/505 (59%), Gaps = 39/505 (7%)
Query: 1 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSML 60
+ +V+VKW KE F VE++T + P VFK QL+ LTGV P RQK+MVKGG LKDD DW +
Sbjct: 3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNI 61
Query: 61 GVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQ 120
+K G L+MMG+AD + + P VFVED+ EE+ ++ GL NLGNTCYMN+T+Q
Sbjct: 62 KIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQ 121
Query: 121 CLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRK 180
C+ SVPELK AL +Y+ + R++ S+ +T A +LF+ +DK+ + P+ L
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHM 181
Query: 181 KYPQFGQL-HNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDT--------------- 224
+PQF + G ++QQDA ECW Q++ L Q L ++ + +T
Sbjct: 182 AFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKS 241
Query: 225 -VKALFGIDIVSRVHCQESGEE--SSETESIYALKCHISHEVNHLHEGLKHGLKSELEKA 281
+ FG++ + + C ES EE + E+ L C I+ EV +L GLK L+ E+ K
Sbjct: 242 LIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQ 301
Query: 282 SPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSD 341
SP L R+A+Y+K S I+ LP YLTIQ VRFF+K + + AK+L+ V +PL LD+Y+ C+
Sbjct: 302 SPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTP 361
Query: 342 DLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQD 401
+L++K+ + R K +D E KK+ N + N T + S+ + S D
Sbjct: 362 ELQEKMVSFRSKFKDLEDKKV---------NQQPN----TSDKKSSPQKEVKYEPFSFAD 408
Query: 402 GVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPLPQREED 461
+ ++ G YDL AVLTH+GRS+ SGHYV+WVK++ +WI++DDD ED
Sbjct: 409 DIGSNN------CGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPED 462
Query: 462 ITKLSGGGDWHMAYICMYKARSISM 486
I +LSGGGDWH+AY+ +Y R + +
Sbjct: 463 ILRLSGGGDWHIAYVLLYGPRRVEI 487
>sp|P40826|UBP14_RABIT Ubiquitin carboxyl-terminal hydrolase 14 OS=Oryctolagus cuniculus
GN=USP14 PE=1 SV=3
Length = 493
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 299/504 (59%), Gaps = 38/504 (7%)
Query: 1 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSML 60
+ +V+VKW KE F VE++T + P VFK QL+ LTGV P RQ++MVKGG LKDD DW +
Sbjct: 3 LYSVTVKWGKEKFGGVELNTDEPPMVFKAQLFALTGVQPARQRVMVKGGTLKDD-DWGNI 61
Query: 61 GVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQ 120
+K G ++MMG+AD + + P VFVED+ EE+ ++ GL NLGNTCYMN+T+Q
Sbjct: 62 KIKNGMTILMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQ 121
Query: 121 CLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRK 180
C+ SVPELK AL +Y+ + R++ S+ +T A +LF+ +DK+ + P+ L
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHM 181
Query: 181 KYPQFGQL-HNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDT--------------- 224
+PQF + G ++QQDA ECW Q++ L Q L ++ + +T
Sbjct: 182 AFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSAAAVAPSKKKSL 241
Query: 225 VKALFGIDIVSRVHCQESGEE--SSETESIYALKCHISHEVNHLHEGLKHGLKSELEKAS 282
+ FG++ + + C ES EE + E+ L C I+ EV +L GLK L+ E+ K S
Sbjct: 242 IDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQS 301
Query: 283 PALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDD 342
P L R+A+Y+K S I+ LP YLTIQ VRFF+K + + AK+L+ V +PL LDVY+ C+ +
Sbjct: 302 PTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPE 361
Query: 343 LRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQDG 402
L++K+ + R K +D E KK+ N + N AS+ +
Sbjct: 362 LQEKMVSFRSKFKDIEDKKV---------NQQPN----------ASDKKSSPQKEVRYEP 402
Query: 403 VTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPLPQREEDI 462
+ D ++ G YDL AVLTH+GRS+ SGHYV+WVK++ +WI++DDD EDI
Sbjct: 403 FSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKHDEWIKFDDDKVSIVTPEDI 462
Query: 463 TKLSGGGDWHMAYICMYKARSISM 486
+LSGGGDWH+AY+ +Y R + +
Sbjct: 463 LRLSGGGDWHIAYVLLYGPRRVEI 486
>sp|Q92353|UBP6_SCHPO Ubiquitin carboxyl-terminal hydrolase 6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp6 PE=1 SV=2
Length = 468
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/494 (38%), Positives = 279/494 (56%), Gaps = 36/494 (7%)
Query: 1 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSML 60
M+ ++++WQ + + ++EI+ ++T K QLY LT VPPERQK++VKGG LKDD +
Sbjct: 2 MIPIAIRWQGKKY-DLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSV 60
Query: 61 GVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQ 120
G+K L+MMGTA E+ P P+ + E+E+ G+ +GL NLGNTCYMNST+Q
Sbjct: 61 GIKPNATLLMMGTAGEL---PTAMPIPAVESVEQEESEDDGYPSGLINLGNTCYMNSTVQ 117
Query: 121 CLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRK 180
L ++PEL A+ +++ SG L L N + +S PV PM+F LR
Sbjct: 118 MLRAIPELSDAVSQFNSSGG----------LVAEYRTLLNSM-QSNAPVTPMRFLQSLRM 166
Query: 181 KYPQFGQL--HNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVH 238
+YPQF ++ G + QQDAEECW+ LL L +SL S + V+ ++S +
Sbjct: 167 EYPQFAEMSRETGGYAQQDAEECWSFLLSVLQRSLSS-------EWVQKNMAGKLLSTMK 219
Query: 239 CQESG---EESSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKES 295
C E+ + S ++ +L CHIS +++ +G+ GL ++ K S L R A+Y K S
Sbjct: 220 CDENEVQEQPSISHDTFLSLPCHISMHTSYMTQGILEGLTQKISKHSDVLNRDAMYSKIS 279
Query: 296 CINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLR 355
I+ LP YLT+ FVRF+WK +KAKILRKV +P ELD +FC+ +L +KL R KLR
Sbjct: 280 RISRLPNYLTVNFVRFYWKASIGKKAKILRKVKFPFELDAVEFCTPELSQKLIPVRDKLR 339
Query: 356 DEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQDGVTTDT--DKETHL 413
+ E E +K ++ +E E A + VA+ Q V + D+ +
Sbjct: 340 EIEKND-----EEHERAAKRIKIQPSEDEKEAEAECRLTQVATCQSLVDPELADDEGANP 394
Query: 414 TGIYDLVAVLTHKGRSADSGHYVAWVKQESGK--WIEYDDDNPLPQREEDITKLSGGGDW 471
TG+YDLV VL+H G SA SGHY AW++ + + W ++D E I L GGG+
Sbjct: 395 TGLYDLVGVLSHAGASASSGHYQAWIRNSNNRAEWFRFNDAKVSIVPAEKIETLDGGGEA 454
Query: 472 HMAYICMYKARSIS 485
AYI +YKA+ I+
Sbjct: 455 DSAYILLYKAKDIA 468
>sp|Q17361|UBP14_CAEEL Ubiquitin carboxyl-terminal hydrolase 14 OS=Caenorhabditis elegans
GN=usp-14 PE=2 SV=2
Length = 489
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/498 (37%), Positives = 272/498 (54%), Gaps = 52/498 (10%)
Query: 1 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSML 60
M V+VKWQKE + VE+DTS P VFK QL+ LT V PERQK+++ G L DD DW +
Sbjct: 1 MPIVNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDD-DWEGI 58
Query: 61 GVKQGQRLMMMGTADEIVKAP---EKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNS 117
+K+ +MMMG+ EI K P EK + EE +S + GL NLGNTCY NS
Sbjct: 59 TIKENMTIMMMGSVGEIPKPPTVLEKKQANRDKQAEE---ISALYPCGLANLGNTCYFNS 115
Query: 118 TIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDL---DKSVK----PVA 170
+Q L V EL ++K ++ R + + + L + LFN L D++++ P+
Sbjct: 116 CVQMLKEVNEL---VLKPAEEMR---IREHNDRLCHNLATLFNSLRDKDRALRSKGEPIK 169
Query: 171 PMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQ--SLRSVNASEIPDTVKAL 228
P + L +PQF + F QQDA EC ++ +++ L N +++L
Sbjct: 170 PFAAILTLSDSFPQFEK-----FKQQDANECLVSIMSNVTRIYGLSGWN-------IESL 217
Query: 229 FGIDIVSRVHCQESGEES-SETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPALGR 287
F I + + C ES E S + E L C+++ +V L G+K G + E+ + S L R
Sbjct: 218 FRIQTETTMKCLESDEVSEKKVERNNQLTCYVNQDVRFLQTGIKAGFEEEMTRNSEELNR 277
Query: 288 SAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKL 347
A + K + I+ LP+YLT+ RFF+K + AKIL+ V +P++LD YD CS +L+ KL
Sbjct: 278 DAKWQKNTQISRLPKYLTVNINRFFYKESTKTNAKILKSVQFPMQLDTYDLCSQELKDKL 337
Query: 348 DAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQDGVTTDT 407
A R ++ EE KL + +K + + D K+ + +G A + E S+
Sbjct: 338 VARRADIKLEEDAKLERELRKKVLDKEQGD-KIFD-DGVALPTAFEDDAGSNN------- 388
Query: 408 DKETHLTGIYDLVAVLTHKGRSADSGHYVAWVK-QESGKWIEYDDDNPLPQREEDITKLS 466
+G YDL ++THKGRS+ GHYVAW++ E GKW +DD++ EE I K S
Sbjct: 389 ------SGFYDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVTVVDEEAILKTS 442
Query: 467 GGGDWHMAYICMYKARSI 484
GGGDWH AY+ +Y+AR I
Sbjct: 443 GGGDWHSAYVLLYEARVI 460
>sp|P43593|UBP6_YEAST Ubiquitin carboxyl-terminal hydrolase 6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP6 PE=1 SV=1
Length = 499
Score = 245 bits (625), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 258/488 (52%), Gaps = 32/488 (6%)
Query: 16 VEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTAD 75
+ + T T K + +LT VP RQK MVKGGL ++S +K G +M++GT D
Sbjct: 19 ITLSTDATSADLKSKAEELTQVPSARQKYMVKGGLSGEESIKIYPLIKPGSTVMLLGTPD 78
Query: 76 -EIVKAPEKGPVFVEDLPEEEQVLSLGH-SAGLFNLGNTCYMNSTIQCLHSVPELKSALI 133
++ P K F+EDL E+QV G N+GNTCY+N+T+Q L+ V +L+ ++
Sbjct: 79 ANLISKPAKKNNFIEDLAPEQQVQQFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMIL 138
Query: 134 KYSQS-GRSNDVDQSSHM---LTVATSELFNDL-DKSVKPVAPMQFWMLLRKKYPQFGQL 188
Y+ S G SN Q + + + F +L +KS K V P+ LRK YPQF +
Sbjct: 139 NYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKSFKSVLPIVLLNTLRKCYPQFAER 198
Query: 189 --HNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQESGEES 246
G + QQDAEE +TQL +++S V + + + F I + + +
Sbjct: 199 DSQGGFYKQQDAEELFTQLFHSMS----IVFGDKFSEDFRIQFKTTIKDTANDNDITVKE 254
Query: 247 SETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESCINGLPRYLTI 306
+E++S L+CHIS N + GL GL ++EK S G +++Y E I+ LP++LT+
Sbjct: 255 NESDS--KLQCHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTV 312
Query: 307 QFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDE--------- 357
Q+VRFFWKR +N+K+KILRKV +P +LDV +D L + A + K+RDE
Sbjct: 313 QYVRFFWKRSTNKKSKILRKVVFPFQLDV----ADMLTPEYAAEKVKVRDELRKVEKEKN 368
Query: 358 --EGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQDGVTTDTDKETHLTG 415
E + K SS + + E + + + + + + + +K + +
Sbjct: 369 EKEREIKRRKFDPSSSENVMTPREQYETQVALNESEKDQWLEEYKKHFPPNLEKGENPSC 428
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQE--SGKWIEYDDDNPLPQREEDITKLSGGGDWHM 473
+Y+L+ V+TH+G +++SGHY A+++ E KW +++DD +E I L+GGG+
Sbjct: 429 VYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLAGGGESDS 488
Query: 474 AYICMYKA 481
A I MYK
Sbjct: 489 ALILMYKG 496
>sp|Q70CQ2|UBP34_HUMAN Ubiquitin carboxyl-terminal hydrolase 34 OS=Homo sapiens GN=USP34
PE=1 SV=2
Length = 3546
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 161/382 (42%), Gaps = 83/382 (21%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALI--KYSQSGRSNDVDQSSHMLTVATSELFND 161
GL NLG TCY+ STIQ L+ +PE + A+ KYS+ D+ + +L + ++F
Sbjct: 1894 VGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSE-----DMKHKTTLLEL--QKMFTY 1946
Query: 162 LDKS-VKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASE 220
L +S K P F K Y Q N T Q+D E +T L+ + + + E
Sbjct: 1947 LMESECKAYNPRPFC----KTYTMDKQPLN-TGEQKDMTEFFTDLITKIEEM-----SPE 1996
Query: 221 IPDTVKALFGIDIVSRVHCQESGEESSETESIYALKCHISHEVNHLHEGL-----KHGLK 275
+ +TVK+LFG I + V + S E Y ++C ++ ++ +++E L K L+
Sbjct: 1997 LKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVA-DMKNIYESLDEVTIKDTLE 2055
Query: 276 SELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDV 335
+ G+ K +C LPR L+ +R+ + + K K+ +PL LD+
Sbjct: 2056 GDNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFNMVTMMKEKVNTHFSFPLRLDM 2115
Query: 336 YDFCSDDLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESS 395
+ D L K + +K G K E S +SKD++ S E
Sbjct: 2116 TPYTEDFLMGKSE-----------RKEGFK--EVSDHSKDSE-------------SYE-- 2147
Query: 396 VASSQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQ-------ESGKWIE 448
YDL+ V H G +AD GHY ++++ ++ KW
Sbjct: 2148 ---------------------YDLIGVTVHTG-TADGGHYYSFIRDIVNPHAYKNNKWYL 2185
Query: 449 YDDDNPLPQREEDITKLSGGGD 470
++D P + GG+
Sbjct: 2186 FNDAEVKPFDSAQLASECFGGE 2207
>sp|Q6ZQ93|UBP34_MOUSE Ubiquitin carboxyl-terminal hydrolase 34 OS=Mus musculus GN=Usp34
PE=1 SV=3
Length = 3582
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 159/383 (41%), Gaps = 85/383 (22%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALI--KYSQSGRSNDVDQSSHMLTVATSELFND 161
GL NLG TCY+ STIQ L+ +PE + A+ KYS+ D+ + +L + ++F
Sbjct: 1931 VGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSE-----DMKHKTTLLEL--QKMFTY 1983
Query: 162 LDKS-VKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASE 220
L +S K P F K Y Q N T Q+D E +T L+ + + + E
Sbjct: 1984 LMESECKAYNPRPFC----KTYTMDKQPLN-TGEQKDMTEFFTDLITKVEEM-----SPE 2033
Query: 221 IPDTVKALFGIDIVSRVHCQESGEESSETESIYALKCHISHEVNHLHEGL-----KHGLK 275
+ +TVK+LFG I + V + S E Y ++C ++ ++ +++E L K L+
Sbjct: 2034 LKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVA-DMKNIYESLDEVTIKDTLE 2092
Query: 276 SELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDV 335
+ G+ K +C LPR L+ +R+ + + K K+ +PL LD+
Sbjct: 2093 GDNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFNMVTMMKEKVNTHFSFPLRLDM 2152
Query: 336 YDFCSDDLRKKLDAPRQKLRDEEGKKLGLKG-GEKSSNSKDNDVKMTEAEGSASNGSGES 394
+ D L K D +K G K G++S +++ +
Sbjct: 2153 TPYTEDFLMGKSD-----------RKEGFKDVGDRSKDTESYE----------------- 2184
Query: 395 SVASSQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQ-------ESGKWI 447
YDL+ V H G +AD GHY ++++ ++ KW
Sbjct: 2185 ----------------------YDLIGVTVHTG-TADGGHYYSFIRDIVNPHAYKNNKWY 2221
Query: 448 EYDDDNPLPQREEDITKLSGGGD 470
++D P + GG+
Sbjct: 2222 LFNDAEVKPFDSAQLASECFGGE 2244
>sp|Q24574|UBPE_DROME Ubiquitin carboxyl-terminal hydrolase 64E OS=Drosophila
melanogaster GN=Ubp64E PE=1 SV=2
Length = 1556
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 164/412 (39%), Gaps = 67/412 (16%)
Query: 105 GLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDK 164
GL N TCY+NS +Q L PE ++AL ++ D D + + +LF +L
Sbjct: 397 GLVNQAMTCYLNSLLQALFMTPEFRNALYRWE-----FDNDNEAKNIPYQLQKLFLNLQT 451
Query: 165 SVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDT 224
S P A ++ L R FG + Q D +E + L ++ + +
Sbjct: 452 S--PKAAVETTDLTR----SFGWDSTEAWQQHDIQELCRVMFDALEHKFKNTKQANL--- 502
Query: 225 VKALFGIDIVSRVHCQESGEESSETESIYALKCHI-----SHEVNHLHEGLKHGLKSELE 279
+ L+ + V C E E + ++ + + S + E L+ ++ E
Sbjct: 503 ISNLYEGKMNDYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQPE-- 560
Query: 280 KASPALGRSAVYLKESC-----------INGLPRYLTIQFVRFFWKRESNQKAKILRKVD 328
L + YL E C P LT+ RF + ++ + K+ +V
Sbjct: 561 ----TLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRFDFDYQTMHRIKLNDRVT 616
Query: 329 YPLELDVYDFCSDDLRKKLDAPRQKLRDEEGKKLGLK----GGEKSSNSKDNDVKMTEAE 384
+P L++ F + R E+ +L S ++ ++D +
Sbjct: 617 FPQTLNLNTFIN----------RSGNSGEQNSQLNGTVDDCSTADSGSAMEDDNLSSGVV 666
Query: 385 GSASNGSGESSVASSQDGV-----TTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWV 439
+AS+ E+ + +G+ T+ + K+ +Y+L A++ H G SA GHY A++
Sbjct: 667 TTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPYLYELFAIMIHSG-SASGGHYYAYI 725
Query: 440 KQ-ESGKWIEYDDDNPLPQREEDITKLSGGGDWHM----------AYICMYK 480
K ++ +W ++D N +EDI + GG + AY+ MY+
Sbjct: 726 KDFDNNEWFCFNDQNVTSITQEDIQRSFGGPNGSYYSSAYTSSTNAYMLMYR 777
>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7
PE=1 SV=2
Length = 1102
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 118/276 (42%), Gaps = 30/276 (10%)
Query: 78 VKAPEKG---------PVFVE-DLPEEEQVLSLGHS--AGLFNLGNTCYMNSTIQCLHSV 125
V PEKG VFV+ D P S H+ GL N G TCYMNS +Q L
Sbjct: 176 VTDPEKGFIDDDKVTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFT 235
Query: 126 PELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRKKYPQF 185
+L+ A+ G D SS + +A +F +L S KPV +K F
Sbjct: 236 NQLRKAVYMMPTEG-----DDSSKSVPLALQRVFYELQHSDKPVG-------TKKLTKSF 283
Query: 186 GQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQESGEE 245
G +FMQ D +E LL + ++ + + T+ LF +VS + C+E
Sbjct: 284 GWETLDSFMQHDVQELCRVLLDNVENKMK---GTCVEGTIPKLFRGKMVSYIQCKEVDYR 340
Query: 246 SSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPA-LGRSAVYLKESCIN--GLPR 302
S E Y ++ I + N + + +L+ + G + E + LP
Sbjct: 341 SDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPP 400
Query: 303 YLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDF 338
L +Q +RF + +++Q KI + ++P +L + +F
Sbjct: 401 VLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEF 436
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 417 YDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEYDDD-NPLPQREEDITKLSGGGD 470
Y L AVL H G + GHYV ++ + GKW ++DDD +EE I GG D
Sbjct: 448 YILHAVLVHSGDNH-GGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHD 502
>sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus
GN=Usp7 PE=1 SV=1
Length = 1103
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 118/276 (42%), Gaps = 30/276 (10%)
Query: 78 VKAPEKG---------PVFVE-DLPEEEQVLSLGHS--AGLFNLGNTCYMNSTIQCLHSV 125
V PEKG VFV+ D P S H+ GL N G TCYMNS +Q L
Sbjct: 177 VTDPEKGFIDDDKVTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFT 236
Query: 126 PELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRKKYPQF 185
+L+ A+ G D SS + +A +F +L S KPV +K F
Sbjct: 237 NQLRKAVYMMPTEG-----DDSSKSVPLALQRVFYELQHSDKPVG-------TKKLTKSF 284
Query: 186 GQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQESGEE 245
G +FMQ D +E LL + ++ + + T+ LF +VS + C+E
Sbjct: 285 GWETLDSFMQHDVQELCRVLLDNVENKMK---GTCVEGTIPKLFRGKMVSYIQCKEVDYR 341
Query: 246 SSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPA-LGRSAVYLKESCIN--GLPR 302
S E Y ++ I + N + + +L+ + G + E + LP
Sbjct: 342 SDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPP 401
Query: 303 YLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDF 338
L +Q +RF + +++Q KI + ++P +L + +F
Sbjct: 402 VLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEF 437
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 417 YDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEYDDD-NPLPQREEDITKLSGGGD 470
Y L AVL H G + GHYV ++ + GKW ++DDD +EE I GG D
Sbjct: 449 YILHAVLVHSGDNH-GGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHD 503
>sp|Q5U252|UBP47_XENLA Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus laevis GN=usp47
PE=2 SV=1
Length = 1350
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 176/481 (36%), Gaps = 69/481 (14%)
Query: 33 DLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMM----GTADEIVKAPEKGPVFV 88
D+ + P + + + G ++ L K G++ + GTAD F+
Sbjct: 80 DMAALDPTPDRTLQEAGFEAGKKNFLHLTDKDGEQPQLTSDESGTADSSGLDDSSQEKFI 139
Query: 89 EDLPEEEQVLSLGHSA------------------GLFNLGNTCYMNSTIQCLHSVPELKS 130
LP EE V + GL N TCY+NS +Q L PE ++
Sbjct: 140 GPLPREESVAGTSNYVSQNYSYSSLLSKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRN 199
Query: 131 ALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRKKYPQFGQLHN 190
AL K+ D S + LF L S K ++ + R FG +
Sbjct: 200 ALYKWEFEESEEDPVSS---IPYQLQRLFVLLQTSKKRA--IETTDVTR----SFGWDSS 250
Query: 191 GTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQESGEESSETE 250
+ Q D +E + L Q + +E D + L+ + V C E G ES +
Sbjct: 251 EAWQQHDVQELCRVMFDALEQKWKQ---TEQADLINQLYQGKLKDYVKCLECGYESWRID 307
Query: 251 SIYALKCHIS-HEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESCING---------- 299
+ + I + N ++ L + ++ + L Y E C
Sbjct: 308 TFLDIPLVIRPYGSNTAFGSMEEALHAFIQPET--LDGPNQYFCERCKRKCDARKGLKFL 365
Query: 300 -LPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDEE 358
P LT+Q RF + S + K+ ++ +P ELD+ F D+ + D
Sbjct: 366 HFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPDELDMSPFI--DMEDEKSPQTDSCTDSG 423
Query: 359 GKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGES---SVASSQDGVTTDTDKETHLTG 415
+ G ++ SN D + E +N + E SVA
Sbjct: 424 AENEGSCHSDQMSNDFSTDDAVDEGICLETNSNIEKLNKSVAEK--------------NS 469
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQ-ESGKWIEYDDDNPLPQREEDITKLSGGGDWHMA 474
+Y+L +V+ H G SA GHY A +K G+W ++D + +EDI K GG +
Sbjct: 470 LYELFSVMVHSG-SAAGGHYYACIKSFADGQWYSFNDQHVSRITQEDIKKTYGGATGNRG 528
Query: 475 Y 475
Y
Sbjct: 529 Y 529
>sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7
PE=1 SV=1
Length = 1103
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 30/276 (10%)
Query: 78 VKAPEKG---------PVFVE-DLPEEEQVLSLGHS--AGLFNLGNTCYMNSTIQCLHSV 125
V PEKG VFV+ D P S H+ GL N G TCYMNS +Q L
Sbjct: 177 VTDPEKGFIDDDKVTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFT 236
Query: 126 PELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRKKYPQF 185
+L+ A+ G D SS + +A +F +L S KPV +K F
Sbjct: 237 NQLRKAVYMMPTEG-----DDSSKSVPLALQRVFYELQHSDKPVG-------TKKLTKSF 284
Query: 186 GQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQESGEE 245
G +FMQ D +E LL + ++ + + T+ LF +VS + C++
Sbjct: 285 GWETLDSFMQHDVQELCRVLLDNVENKMK---GTCVEGTIPKLFRGKMVSYIQCKDVDYR 341
Query: 246 SSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPA-LGRSAVYLKESCIN--GLPR 302
S E Y ++ I + N + + +L+ + G + E + LP
Sbjct: 342 SDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPP 401
Query: 303 YLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDF 338
L +Q +RF + +++Q KI + ++P +L + +F
Sbjct: 402 VLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEF 437
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 417 YDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEYDDD-NPLPQREEDITKLSGGGD 470
Y L AVL H G + GHYV ++ + GKW ++DDD +EE I GG D
Sbjct: 449 YILHAVLVHSGDNH-GGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHD 503
>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7
PE=2 SV=1
Length = 1101
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 18/238 (7%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLD 163
GL N G TCYMNS +Q L +L+ A+ G D SS + +A +F +L
Sbjct: 214 VGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEG-----DDSSKSVPLALQRVFYELQ 268
Query: 164 KSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPD 223
S KPV +K FG +FMQ D +E LL + ++ + +
Sbjct: 269 HSDKPVG-------TKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMK---GTCVEG 318
Query: 224 TVKALFGIDIVSRVHCQESGEESSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASP 283
T+ LF +VS + C+ S E Y ++ I + N + + +L+ +
Sbjct: 319 TIPKLFRGKMVSYIQCKHVDYRSERIEDYYDIQLSIKGKKNIFESFIDYVAVEQLDGDNK 378
Query: 284 A-LGRSAVYLKESCIN--GLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDF 338
G + E + LP L +Q +RF + +++Q KI + ++P +L + +F
Sbjct: 379 YDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEF 436
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 417 YDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEYDDD-NPLPQREEDITKLSGGGD 470
Y L AVL H G + GHYV ++ + GKW ++DDD +EE I GG D
Sbjct: 448 YILHAVLVHSGDNH-GGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHD 502
>sp|A1A5G2|UBP47_XENTR Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus tropicalis
GN=usp47 PE=2 SV=1
Length = 1354
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 174/484 (35%), Gaps = 71/484 (14%)
Query: 31 LYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMM----GTADEIVKAPEKGPV 86
+ D+ + P + + + G ++ L K G++ + GTAD
Sbjct: 79 MVDMAALDPTPDRTLQEAGFEAGKKNFLHLTDKNGEQPQLASDESGTADSSGLDDSTQEK 138
Query: 87 FVEDLPEEEQVLSLGHSA------------------GLFNLGNTCYMNSTIQCLHSVPEL 128
F+ LP EE V GL N TCY+NS +Q L PE
Sbjct: 139 FIGPLPREESVACTSDYVSQNYSYSSLLSKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEF 198
Query: 129 KSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRKKYPQFGQL 188
++AL K+ D S + LF L S K ++ + R FG
Sbjct: 199 RNALYKWEFEESEEDPVSS---IPYQLQRLFVLLQTSKKRA--IETTDVTR----SFGWD 249
Query: 189 HNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQESGEESSE 248
+ + Q D +E + L Q + +E D + L+ + V C E G ES
Sbjct: 250 SSEAWQQHDVQELCRVMFDALEQKWKQ---TEQADLINQLYQGKLKDYVKCLECGYESWR 306
Query: 249 TESIYALKCHI-----SHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESCING---- 299
++ + I + + E L+ ++ E L Y E C
Sbjct: 307 IDTFLDIPLVIRPFGSNTAFGSMEEALQAFIQPE------TLDGPNQYFCERCKRKCDAR 360
Query: 300 -------LPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQ 352
P LT+Q RF + S + K+ ++ +P ELD+ F D+ +
Sbjct: 361 KGLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPDELDMSPFI--DVEDEKSPQTD 418
Query: 353 KLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQDGVTTDTDKETH 412
D + G ++ SN D + E +N + E S +
Sbjct: 419 SCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLETNSNIEKLNKSVSEK---------- 468
Query: 413 LTGIYDLVAVLTHKGRSADSGHYVAWVKQ-ESGKWIEYDDDNPLPQREEDITKLSGGGDW 471
+Y+L +V+ H G SA GHY A +K G+W ++D + +EDI K GG
Sbjct: 469 -NSLYELFSVMVHSG-SAAGGHYYACIKSFADGQWYSFNDQHVSRITQEDIKKTYGGSTG 526
Query: 472 HMAY 475
+ Y
Sbjct: 527 NRGY 530
>sp|B1AY13|UBP24_MOUSE Ubiquitin carboxyl-terminal hydrolase 24 OS=Mus musculus GN=Usp24
PE=1 SV=1
Length = 2617
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 143/361 (39%), Gaps = 71/361 (19%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLD 163
GL N G TCYMN+ Q L+ P L +L+ + D + LF L
Sbjct: 1686 VGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNPDDS-----VFYQVQSLFGHLM 1740
Query: 164 KS-VKPVAPMQFWMLLRKKYPQFGQLHNGTFM--QQDAEECWTQLLYTLSQSLRSVNASE 220
+S ++ P FW + F + ++ QQDA E +T L+ + + L+ + +
Sbjct: 1741 ESKLQYYVPENFWKI-------FKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKMGREQ 1793
Query: 221 I-PDTVKALFGIDIVSRVHCQESGEESSETESIYALKCHISHEVNHLHEGLKHGLKSELE 279
I +T + ++ + C++ E+ AL ++ L L ++ E+
Sbjct: 1794 IFKNTFQGIYSDQKI----CKDCPHRYEREEAFMALNLGVT-SCQSLEISLDQFVRGEVL 1848
Query: 280 KASPA-----LGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELD 334
+ S A + +K +CI LP L I +RF + ES + K ++ +P L+
Sbjct: 1849 EGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLN 1908
Query: 335 VYDFCSDDLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGES 394
+ E G+ + SS +N M + G GS
Sbjct: 1909 M---------------------EPYTVAGMARQDSSSEVGENGRNMDQGGG----GSPRK 1943
Query: 395 SVASSQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQE----SGKWIEYD 450
VA LT Y+LV V+ H G+ A +GHY +++K GKW +++
Sbjct: 1944 KVA---------------LTENYELVGVIVHSGQ-AHAGHYYSFIKDRRGCGKGKWYKFN 1987
Query: 451 D 451
D
Sbjct: 1988 D 1988
>sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24
PE=1 SV=3
Length = 2620
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 143/361 (39%), Gaps = 71/361 (19%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLD 163
GL N G TCYMN+ Q L+ P L +L+ + D + LF L
Sbjct: 1689 VGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNPDDS-----VFYQVQSLFGHLM 1743
Query: 164 KS-VKPVAPMQFWMLLRKKYPQFGQLHNGTFM--QQDAEECWTQLLYTLSQSLRSVNASE 220
+S ++ P FW + F + ++ QQDA E +T L+ + + L+ + +
Sbjct: 1744 ESKLQYYVPENFWKI-------FKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKMGRDQ 1796
Query: 221 I-PDTVKALFGIDIVSRVHCQESGEESSETESIYALKCHISHEVNHLHEGLKHGLKSELE 279
I +T + ++ + C++ E+ AL ++ L L ++ E+
Sbjct: 1797 IFKNTFQGIYSDQKI----CKDCPHRYEREEAFMALNLGVT-SCQSLEISLDQFVRGEVL 1851
Query: 280 KASPA-----LGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELD 334
+ S A + +K +CI LP L I +RF + ES + K ++ +P L+
Sbjct: 1852 EGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLN 1911
Query: 335 VYDFCSDDLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGES 394
+ + + + +D+ ++ E S G G S
Sbjct: 1912 MEPYTVSGMAR----------------------------QDSSSEVGENGRSVDQGGGGS 1943
Query: 395 SVASSQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQE----SGKWIEYD 450
K+ LT Y+LV V+ H G+ A +GHY +++K GKW +++
Sbjct: 1944 P------------RKKVALTENYELVGVIVHSGQ-AHAGHYYSFIKDRRGCGKGKWYKFN 1990
Query: 451 D 451
D
Sbjct: 1991 D 1991
>sp|E1C1R4|UBP47_CHICK Ubiquitin carboxyl-terminal hydrolase 47 OS=Gallus gallus GN=USP47
PE=3 SV=1
Length = 1375
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 147/380 (38%), Gaps = 52/380 (13%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLD 163
GL N TCY+NS +Q L PE ++AL K+ D S + LF L
Sbjct: 187 VGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTS---IPYQLQRLFVLLQ 243
Query: 164 KSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPD 223
S K ++ + R FG + + Q D +E + L Q + +E D
Sbjct: 244 TSKK--RAIETTDVTR----SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQ---TEQAD 294
Query: 224 TVKALFGIDIVSRVHCQESGEESSETESIYALKCHI-----SHEVNHLHEGLKHGLKSEL 278
+ L+ + V C E G E ++ + I + + E L ++ E+
Sbjct: 295 LINQLYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEI 354
Query: 279 EKASPALGRSAVYLKESCING-----------LPRYLTIQFVRFFWKRESNQKAKILRKV 327
L Y E C P LT+Q RF + + + K+ ++
Sbjct: 355 ------LDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 408
Query: 328 DYPLELDVYDFCSDDLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSA 387
+P ELD+ F D+ + + D + G ++ SN ND + E
Sbjct: 409 TFPEELDMSIFI--DVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLE 466
Query: 388 SNGSGE--SSVASSQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQES-G 444
SN + E + V S ++ + +Y+L +V+ H G SA GHY A +K S
Sbjct: 467 SNSAAERIAKVGSEKNSL------------LYELFSVMVHSG-SAAGGHYYACIKSFSDD 513
Query: 445 KWIEYDDDNPLPQREEDITK 464
+W ++D + +EDI K
Sbjct: 514 QWYSFNDQHVSKITQEDIKK 533
>sp|Q96K76|UBP47_HUMAN Ubiquitin carboxyl-terminal hydrolase 47 OS=Homo sapiens GN=USP47
PE=1 SV=3
Length = 1375
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 148/378 (39%), Gaps = 48/378 (12%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLD 163
GL N TCY+NS +Q L PE ++AL K+ D S + LF L
Sbjct: 188 VGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTS---IPYQLQRLFVLLQ 244
Query: 164 KSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPD 223
S K ++ + R FG + + Q D +E + L Q + +E D
Sbjct: 245 TSKK--RAIETTDVTR----SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQ---TEQAD 295
Query: 224 TVKALFGIDIVSRVHCQESGEESSETESIYALKCHI-----SHEVNHLHEGLKHGLKSEL 278
+ L+ + V C E G E ++ + I S + E L ++ E+
Sbjct: 296 LINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEI 355
Query: 279 EKASPALGRSAVYLKESCING-----------LPRYLTIQFVRFFWKRESNQKAKILRKV 327
L Y E C P LT+Q RF + + + K+ ++
Sbjct: 356 ------LDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 409
Query: 328 DYPLELDVYDFCSDDLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSA 387
+P ELD+ F D+ + + D + G ++ SN ND + E
Sbjct: 410 TFPEELDMSTFI--DVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLE 467
Query: 388 SNGSGESSVASSQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQESG-KW 446
+N SG ++ S G+ ++ IY+L +V+ H G SA GHY A +K S +W
Sbjct: 468 TN-SGTEKISKS--GLEKNS-------LIYELFSVMVHSG-SAAGGHYYACIKSFSDEQW 516
Query: 447 IEYDDDNPLPQREEDITK 464
++D + +EDI K
Sbjct: 517 YSFNDQHVSRITQEDIKK 534
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 117/309 (37%), Gaps = 47/309 (15%)
Query: 59 MLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNST 118
++ V + + MG A+ E GP E P E H GL N GNTCY NS
Sbjct: 4 LMTVSKLASICTMG-ANASALEKEIGP---EQFPVNE------HYFGLVNFGNTCYCNSV 53
Query: 119 IQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDL---DKSVKPVAPMQFW 175
+Q L+ + ++ Y R + L ++LF+ + K V + P +F
Sbjct: 54 LQALYFCRPFREKVLAYKSQPRKKE------SLLTCLADLFHSIATQKKKVGVIPPKKFI 107
Query: 176 MLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLR-------------------SV 216
LRK+ F +MQQDA E LL T++ L+
Sbjct: 108 TRLRKENELFDN-----YMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDSEN 162
Query: 217 NASEIPDTVKALFGIDIVSRVHCQESGEESSETESIYALKCHISHE--VNHLHEGLKH-- 272
N++ P V +F + + C SS+ E L + + H G +
Sbjct: 163 NSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTE 222
Query: 273 GLKSELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLE 332
L SE + K + LP L + RF + + ++ K+ +V +PLE
Sbjct: 223 TLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLE 282
Query: 333 LDVYDFCSD 341
L +++ D
Sbjct: 283 LRLFNTSGD 291
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+YDLVAV+ H G + GHY+A VK W+ +DDD
Sbjct: 298 MYDLVAVVVHCGSGPNRGHYIAIVKSHDF-WLLFDDD 333
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 120/310 (38%), Gaps = 48/310 (15%)
Query: 59 MLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNST 118
++ V + + MG A+ E GP E P E H GL N GNTCY NS
Sbjct: 4 LMTVSKFASICTMG-ANASALEKEIGP---EQFPVNE------HYFGLVNFGNTCYCNSV 53
Query: 119 IQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDL---DKSVKPVAPMQFW 175
+Q L+ + ++ Y R + ++LT ++LF+ + K V + P +F
Sbjct: 54 LQALYFCRPFREKVLAYKSQPR-----KKENLLT-CLADLFHSIATQKKKVGVIPPKKFI 107
Query: 176 MLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRS-------------------- 215
LRK+ F +MQQDA E LL T++ L+
Sbjct: 108 TRLRKENELF-----DNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRNGDVDNED 162
Query: 216 VNASEIPDTVKALFGIDIVSRVHCQESGEESSETESIYALKCHISHE--VNHLHEGLKH- 272
N++ P V +F + + C SS+ E L + + H G +
Sbjct: 163 NNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNT 222
Query: 273 -GLKSELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPL 331
L SE + K + LP L + RF + + ++ K+ +V +PL
Sbjct: 223 ETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPL 282
Query: 332 ELDVYDFCSD 341
EL +++ D
Sbjct: 283 ELRLFNTSGD 292
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+YDLVAV+ H G + GHY+A VK W+ +DDD
Sbjct: 299 MYDLVAVVVHCGSGPNRGHYIAIVKSHDF-WLLFDDD 334
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 119/310 (38%), Gaps = 48/310 (15%)
Query: 59 MLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNST 118
++ V + + MG A+ E GP E P E H GL N GNTCY NS
Sbjct: 4 LMTVSRIASICTMG-ANASALEKEIGP---EQFPVNE------HYFGLVNFGNTCYCNSV 53
Query: 119 IQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDL---DKSVKPVAPMQFW 175
+Q L+ + ++ Y R + ++LT S+LF+ + K V + P +F
Sbjct: 54 LQALYFCRPFREKVLAYKSQPRKKE-----NLLT-CLSDLFHSIATQKKKVGVIPPKKFI 107
Query: 176 MLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASE--------------- 220
LRK+ F +MQQDA E LL T++ L+ E
Sbjct: 108 TRLRKENELFDN-----YMQQDAHEFLNYLLNTIADILQEERKQEKQNGRIPNGNIDNEN 162
Query: 221 ---IPDT--VKALFGIDIVSRVHCQESGEESSETESIYALKCHISHE--VNHLHEGLKH- 272
PD V +F + + C SS+ E L + + H G +
Sbjct: 163 NNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNT 222
Query: 273 -GLKSELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPL 331
L SE + K + LP L + RF + + ++ K+ +V +PL
Sbjct: 223 ETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPL 282
Query: 332 ELDVYDFCSD 341
EL +++ D
Sbjct: 283 ELRLFNTSGD 292
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+YDLVAV+ H G + GHY+A VK W+ +DDD
Sbjct: 299 MYDLVAVVVHCGSGPNRGHYIAIVKSHDF-WLLFDDD 334
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 119/310 (38%), Gaps = 48/310 (15%)
Query: 59 MLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNST 118
++ V + + MG A+ E GP E P E H GL N GNTCY NS
Sbjct: 4 LMTVSRIASICTMG-ANASALEKEIGP---EQFPVNE------HYFGLVNFGNTCYCNSV 53
Query: 119 IQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDL---DKSVKPVAPMQFW 175
+Q L+ + ++ Y R + ++LT S+LF+ + K V + P +F
Sbjct: 54 LQALYFCRPFREKVLAYKSQPRKKE-----NLLT-CLSDLFHSIATQKKKVGVIPPKKFI 107
Query: 176 MLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASE--------------- 220
LRK+ F +MQQDA E LL T++ L+ E
Sbjct: 108 TRLRKENELF-----DNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRIPNGNIDNEN 162
Query: 221 ---IPDT--VKALFGIDIVSRVHCQESGEESSETESIYALKCHISHE--VNHLHEGLKH- 272
PD V +F + + C SS+ E L + + H G +
Sbjct: 163 NNSAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNT 222
Query: 273 -GLKSELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPL 331
L SE + K + LP L + RF + + ++ K+ +V +PL
Sbjct: 223 ETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPL 282
Query: 332 ELDVYDFCSD 341
EL +++ D
Sbjct: 283 ELRLFNTSGD 292
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+YDLVAV+ H G + GHY+A VK W+ +DDD
Sbjct: 299 MYDLVAVVVHCGSGPNRGHYIAIVKSHDF-WLLFDDD 334
>sp|B1AQJ2|UBP36_MOUSE Ubiquitin carboxyl-terminal hydrolase 36 OS=Mus musculus GN=Usp36
PE=2 SV=1
Length = 1098
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 72 GTADEIVKAPEKGPVFVEDLPEE-EQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKS 130
G+ + V AP+K VE L E+V +G AGL NLGNTC++NSTIQCL P L +
Sbjct: 91 GSGGDGVPAPQKVLFPVERLSLRWERVFRVG--AGLHNLGNTCFLNSTIQCLTYTPPLAN 148
Query: 131 ALIKYSQSGRSNDVDQSSH-----MLTVATSELFNDLDKSVKPVAPMQFWMLLRK--KYP 183
L+ S + +S H ML + + + S + P+ F L+K ++
Sbjct: 149 YLL-------SKEHARSCHQGGFCMLCLMQNHMVQAFANSGNAIKPVSFIRDLKKIARHF 201
Query: 184 QFGQLHNG-TFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQES 242
+FG + F++ + L ++ R A+ + V +FG + SRV C
Sbjct: 202 RFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL---VHQIFGGYLRSRVKCSVC 258
Query: 243 GEESSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESCINGLPR 302
S + + I N + L+ +KS++ L Y+ C +P
Sbjct: 259 KSVSDTYDPYLDIALEIRQAAN-IVRALELFVKSDV------LSGENAYMCAKCKKKVPA 311
Query: 303 ------YLTIQFVRFFWKRESN-QKAKILRKVDYPLELDVYDFCS 340
+ T + KR +N KI + V YP L++ + S
Sbjct: 312 SKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMS 356
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDD 451
+Y L AVL H G S +GHY +VK +G+W + +D
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMND 399
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 116/310 (37%), Gaps = 48/310 (15%)
Query: 59 MLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNST 118
++ V + + MG A+ E GP E P E H GL N GNTCY NS
Sbjct: 4 LMTVSKFASICTMG-ANASALEKEIGP---EQFPVNE------HYFGLVNFGNTCYCNSV 53
Query: 119 IQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDL---DKSVKPVAPMQFW 175
+Q L+ + ++ Y R + L ++LF+ + K V + P +F
Sbjct: 54 LQALYFCRPFREKVLAYKSQPRKKE------SLLTCLADLFHSIATQKKKVGVIPPKKFI 107
Query: 176 MLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASE--------------- 220
LRK+ F +MQQDA E LL T++ L+ E
Sbjct: 108 TRLRKENELFDN-----YMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDNEN 162
Query: 221 ---IPDT--VKALFGIDIVSRVHCQESGEESSETESIYALKCHISHE--VNHLHEGLKH- 272
PD V +F + + C SS+ E L + + H G +
Sbjct: 163 NNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNT 222
Query: 273 -GLKSELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPL 331
L SE + K + LP L + RF + + ++ K+ +V +PL
Sbjct: 223 ETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPL 282
Query: 332 ELDVYDFCSD 341
EL +++ D
Sbjct: 283 ELRLFNTSGD 292
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+YDLVAV+ H G + GHY+A VK W+ +DDD
Sbjct: 299 MYDLVAVVVHCGSGPNRGHYIAIVKSHDF-WLLFDDD 334
>sp|P34547|UBPX_CAEEL Probable ubiquitin carboxyl-terminal hydrolase 46 OS=Caenorhabditis
elegans GN=usp-46 PE=3 SV=3
Length = 426
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 102 HSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFND 161
H GL N GNTCY NS IQ L + ++ Y Q+ + + + + L ++LF+
Sbjct: 25 HYYGLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQTLKKSGASKDN--LVTCLADLFHS 82
Query: 162 L---DKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSL 213
+ + V +AP +F L+K+ F +MQQDA E + L+ T+S++L
Sbjct: 83 IASQKRRVGTIAPKRFITKLKKENELFDN-----YMQQDAHEFFNYLINTISETL 132
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+YDLVA + H G + + GHY+ VK S W+ +DDD
Sbjct: 324 MYDLVATVVHCGATPNRGHYITLVKSNSF-WLVFDDD 359
>sp|Q5ZID5|UBP28_CHICK Ubiquitin carboxyl-terminal hydrolase 28 OS=Gallus gallus GN=USP28
PE=2 SV=1
Length = 1047
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 44/283 (15%)
Query: 105 GLFNLGNTCYMNSTIQCLHSVPELKSALIKYS-----------QSGRSNDVDQSSHMLTV 153
G+ N+GNTC+ ++ IQ L +P+ + ++ YS ++G+ N L
Sbjct: 157 GMKNIGNTCWFSAVIQSLFQLPQFRRLVLSYSFPPNVLESCRTRTGKRNIAFMQE--LQC 214
Query: 154 ATSELFNDLDKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEEC------WTQLLY 207
+ + K V P A ++ LLR + + QQD E W + +
Sbjct: 215 LFALMLGTRRKFVDPSAALE---LLRDAFKSTEE------QQQDVSEFTHKLLDWLEDAF 265
Query: 208 TLSQSLRSV-NASEIPDTVKALFGIDIVSRVHCQESGEESSETESI--YALKCHISHEVN 264
L+ ++RS + SE P V+ +G + VH G S+ E+ Y L+ + +N
Sbjct: 266 QLAVNVRSPGDKSENP-MVQLFYGTFLTEGVH---EGNTFSKIETFGQYPLQVNGYRNLN 321
Query: 265 HLHEGLKHGLKSELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKAKIL 324
EG + + E A+ +S Y++E LP LT + RF + + Q KI
Sbjct: 322 ECLEGAMVEGEMDEETAT----QSVKYVQERWFTKLPPVLTFELSRFEFNQSLGQPEKIH 377
Query: 325 RKVDYP--LELDVYDFCSDDLRKKLDAPRQKLRDEEGKKLGLK 365
K+++P + +D Y +CS +L + R++++ + K L L+
Sbjct: 378 TKLEFPQTIFMDRYLYCSKEL---IQTKREEMKKLKEKMLVLQ 417
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 410 ETHLTGI-YDLVAVLTHKGRSADSGHYVAWVKQESGK-WIEYDDDNPLPQREEDITKLSG 467
+ HL + Y L AVL H+G+ A++GHY A++ + K W++Y+D + E++ + S
Sbjct: 577 DPHLQQVPYHLHAVLVHEGQ-ANAGHYWAFIYDQPRKSWLKYNDISVTESSWEELERDSF 635
Query: 468 GGDWHM-AYICMYKARSIS 485
GG + AY MY + +S
Sbjct: 636 GGLRNASAYCLMYISDKVS 654
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 20/242 (8%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLD 163
GL N G TCYMNS +Q L + + K D D S + A +F +L+
Sbjct: 230 VGLKNQGATCYMNSLLQSLFFTNIFRKTVYKIP-----TDNDDSRDSVAYALQRVFYNLE 284
Query: 164 KSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPD 223
K +PV+ + L R FG +FMQ D +E L L + ++ +E+ +
Sbjct: 285 KQREPVSTTE---LTRS----FGWNSFDSFMQHDIQEFNRVLQDNLEKKMK---GTEVEN 334
Query: 224 TVKALFGIDIVSRVHCQESGEESSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASP 283
+ +F + S V C + ESS E + ++ ++ ++ L + + ++ E
Sbjct: 335 ALNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNVK-GMDTLEDSFRDAIQVETLTGDN 393
Query: 284 ALGRSAVYLKES----CINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFC 339
L+++ LP L +Q RF + + KI + ++PLE+D+ +
Sbjct: 394 KYYAEGHGLQDAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHEFPLEIDLEPYL 453
Query: 340 SD 341
S+
Sbjct: 454 SE 455
>sp|Q8BY87|UBP47_MOUSE Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus GN=Usp47
PE=1 SV=2
Length = 1376
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 145/378 (38%), Gaps = 48/378 (12%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLD 163
GL N TCY+NS +Q L PE ++AL K+ D S + LF L
Sbjct: 188 VGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEDSEEDPVTS---IPYQLQRLFVLLQ 244
Query: 164 KSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPD 223
S K ++ + R FG + + Q D +E + L Q + +E D
Sbjct: 245 TSKK--RAIETTDVTR----SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQ---TEQAD 295
Query: 224 TVKALFGIDIVSRVHCQESGEESSETESIYALKCHI-----SHEVNHLHEGLKHGLKSEL 278
+ L+ + V C E G E ++ + I S + E L ++ E+
Sbjct: 296 LINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEI 355
Query: 279 EKASPALGRSAVYLKESCING-----------LPRYLTIQFVRFFWKRESNQKAKILRKV 327
L Y E C P LT+Q RF + + + K+ ++
Sbjct: 356 ------LDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 409
Query: 328 DYPLELDVYDFCSDDLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSA 387
+P ELD+ F D+ + + D + G ++ SN D + E
Sbjct: 410 SFPEELDMSTFI--DIEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLE 467
Query: 388 SNGSGESSVASSQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQES-GKW 446
S+ E S+ G+ + + +Y+L +V+ H G SA GHY A +K S +W
Sbjct: 468 SSSGSEK---ISKPGLEKN-------SLMYELFSVMVHSG-SAAGGHYYACIKSFSDDQW 516
Query: 447 IEYDDDNPLPQREEDITK 464
++D + +EDI K
Sbjct: 517 YSFNDQHVSRITQEDIKK 534
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 39/268 (14%)
Query: 102 HSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFND 161
H GL N GNTCY NS +Q L+ + ++ Y R + ++LT ++LF+
Sbjct: 37 HYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPR-----RKENLLT-CLADLFHS 90
Query: 162 L---DKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQ------- 211
+ + V + P +F LRK+ F +MQQDA E LL T++
Sbjct: 91 IANQKRKVGVIPPKKFITRLRKENELF-----DNYMQQDAHEFLNYLLNTIADLLQEERK 145
Query: 212 -----------SLRSVNASEIPDT---VKALFGIDIVSRVHCQESGEESSETESIYALKC 257
+L S N + P + V +F + + C SS+ E L
Sbjct: 146 QDKQNGKLANGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSV 205
Query: 258 HISHE--VNHLHEGLKH--GLKSELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFW 313
+ + H G + L SE + K + LP L + RF +
Sbjct: 206 DVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKY 265
Query: 314 KRESNQKAKILRKVDYPLELDVYDFCSD 341
+ + K+ +V +PLEL +++ D
Sbjct: 266 MEQLQRYTKLSYRVVFPLELRLFNTSGD 293
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+YDLVAV+ H G + GHY+A VK W+ +DDD
Sbjct: 300 LYDLVAVVVHCGSGPNRGHYIAIVKSHDF-WLLFDDD 335
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 111/275 (40%), Gaps = 43/275 (15%)
Query: 75 DEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIK 134
+EI++A GP DL + + AGL NLG TCY NS +QCL+ + +
Sbjct: 84 NEIIRA--LGPNPSTDLRDSTET-----PAGLTNLGATCYANSILQCLYMNTSFRLGIFS 136
Query: 135 YSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFM 194
D+ + H + + LF L S M F + + + +L NG +
Sbjct: 137 LEP-----DILK-MHPVLDQLARLFAQLHSS-----KMAF--IDSAPFIKTLELDNG--V 181
Query: 195 QQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQESG---EESSETES 251
QQD+ E T L L SL V+ LF + C G E SS+ E
Sbjct: 182 QQDSHEFLTLFLSLLEGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMED 241
Query: 252 IYALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESC-----------INGL 300
Y L+ +I +N+L + L L +E AL Y ESC + L
Sbjct: 242 FYELELNIKG-LNNLEQSLDDYLSTE------ALDGENQYFCESCQKRVDATRCIKLRSL 294
Query: 301 PRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDV 335
P + Q R+ + ++ K KI +P +LD+
Sbjct: 295 PPVVNFQLKRYVFLPKTTTKKKISSAFSFPGQLDM 329
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 417 YDLVAVLTHKGRSADSGHYVAWVKQES-GKWIEYDDDN 453
Y L A+L HKG +A+SGHYVA VK ES G+W E+DD++
Sbjct: 342 YGLSAILIHKGSAANSGHYVAHVKDESNGQWWEFDDEH 379
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 111/275 (40%), Gaps = 43/275 (15%)
Query: 75 DEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIK 134
+EI++A GP DL + + AGL NLG TCY NS +QCL+ + +
Sbjct: 84 NEIIRA--LGPNPSTDLRDSTET-----PAGLTNLGATCYANSILQCLYMNTSFRLGIFS 136
Query: 135 YSQSGRSNDVDQSSHMLTVATSELFNDLDKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFM 194
D+ + H + + LF L S M F + + + +L NG +
Sbjct: 137 LEP-----DILK-MHPVLDQLARLFAQLHSS-----KMAF--IDSAPFIKTLELDNG--V 181
Query: 195 QQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQESG---EESSETES 251
QQD+ E T L L SL V+ LF + C G E SS+ E
Sbjct: 182 QQDSHEFLTLFLSLLEGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMED 241
Query: 252 IYALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESC-----------INGL 300
Y L+ +I +N+L + L L +E AL Y ESC + L
Sbjct: 242 FYELELNIKG-LNNLEQSLDDYLSTE------ALDGENQYFCESCQKRVDATRCIKLRSL 294
Query: 301 PRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDV 335
P + Q R+ + ++ K KI +P +LD+
Sbjct: 295 PPVVNFQLKRYVFLPKTTTKKKISSAFSFPGQLDM 329
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 417 YDLVAVLTHKGRSADSGHYVAWVKQES-GKWIEYDDDN 453
Y L A+L HKG +A+SGHYVA VK ES G+W E+DD++
Sbjct: 342 YGLSAILIHKGSAANSGHYVAHVKDESNGQWWEFDDEH 379
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 102 HSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFND 161
H GL N GNTCY NS +Q L+ + ++ Y + + ++LT ++LF+
Sbjct: 33 HYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK-----KKENLLT-CLADLFHS 86
Query: 162 L---DKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQ------- 211
+ K V + P +F LRK+ F +MQQDA E LL T++
Sbjct: 87 IATQKKKVGVIPPKKFISRLRKENDLF-----DNYMQQDAHEFLNYLLNTIADILQEEKK 141
Query: 212 ------SLRSVNASEIPDT-------VKALFGIDIVSRVHCQESGEESSETESIYALKCH 258
L++ N +E + V +F + + C SS+ E L
Sbjct: 142 QEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 201
Query: 259 ISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESC----------INGLPRYLTIQF 308
+ + H L+ + Y + C + LP L +
Sbjct: 202 VEQNT-----SITHCLR-DFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHL 255
Query: 309 VRFFWKRESNQKAKILRKVDYPLELDVYDFCSD 341
RF + + ++ K+ +V +PLEL +++ SD
Sbjct: 256 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSD 288
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 411 THLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+L +YDLVAV+ H G + GHY+ VK G W+ +DDD
Sbjct: 290 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH-GFWLLFDDD 330
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 102 HSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFND 161
H GL N GNTCY NS +Q L+ + ++ Y + + ++LT ++LF+
Sbjct: 33 HYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK-----KKENLLT-CLADLFHS 86
Query: 162 L---DKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQ------- 211
+ K V + P +F LRK+ F +MQQDA E LL T++
Sbjct: 87 IATQKKKVGVIPPKKFISRLRKENDLF-----DNYMQQDAHEFLNYLLNTIADILQEEKK 141
Query: 212 ------SLRSVNASEIPDT-------VKALFGIDIVSRVHCQESGEESSETESIYALKCH 258
L++ N +E + V +F + + C SS+ E L
Sbjct: 142 QEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 201
Query: 259 ISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESC----------INGLPRYLTIQF 308
+ + H L+ + Y + C + LP L +
Sbjct: 202 VEQNT-----SITHCLR-DFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHL 255
Query: 309 VRFFWKRESNQKAKILRKVDYPLELDVYDFCSD 341
RF + + ++ K+ +V +PLEL +++ SD
Sbjct: 256 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSD 288
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 411 THLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+L +YDLVAV+ H G + GHY+ VK G W+ +DDD
Sbjct: 290 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH-GFWLLFDDD 330
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 102 HSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFND 161
H GL N GNTCY NS +Q L+ + ++ Y + + ++LT ++LF+
Sbjct: 33 HYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK-----KKENLLT-CLADLFHS 86
Query: 162 L---DKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQ------- 211
+ K V + P +F LRK+ F +MQQDA E LL T++
Sbjct: 87 IATQKKKVGVIPPKKFISRLRKENDLF-----DNYMQQDAHEFLNYLLNTIADILQEEKK 141
Query: 212 ------SLRSVNASEIPDT-------VKALFGIDIVSRVHCQESGEESSETESIYALKCH 258
L++ N +E + V +F + + C SS+ E L
Sbjct: 142 QEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 201
Query: 259 ISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESC----------INGLPRYLTIQF 308
+ + H L+ + Y + C + LP L +
Sbjct: 202 VEQNT-----SITHCLR-DFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHL 255
Query: 309 VRFFWKRESNQKAKILRKVDYPLELDVYDFCSD 341
RF + + ++ K+ +V +PLEL +++ SD
Sbjct: 256 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSD 288
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 411 THLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+L +YDLVAV+ H G + GHY+ VK G W+ +DDD
Sbjct: 290 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH-GFWLLFDDD 330
>sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36
PE=1 SV=3
Length = 1121
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 35/281 (12%)
Query: 78 VKAPEKGPVFVEDLPEE-EQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYS 136
V AP+K E L E+V +G AGL NLGNTC++N+TIQCL P L + L+
Sbjct: 97 VPAPQKVLFPTERLSLRWERVFRVG--AGLHNLGNTCFLNATIQCLTYTPPLANYLL--- 151
Query: 137 QSGRSNDVDQSSH-----MLTVATSELFNDLDKSVKPVAPMQFWMLLRK--KYPQFGQLH 189
S + +S H ML V + + S + P+ F L+K ++ +FG
Sbjct: 152 ----SKEHARSCHQGSFCMLCVMQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQE 207
Query: 190 NG-TFMQQDAEECWTQLLYTLSQSLRSVNASEIPDTVKALFGIDIVSRVHCQESGEESSE 248
+ F++ + L ++ R A+ + V +FG + SRV C S
Sbjct: 208 DAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL---VHQIFGGYLRSRVKCSVCKSVSDT 264
Query: 249 TESIYALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESCINGLPR------ 302
+ + I N + L+ +K+++ L Y+ C +P
Sbjct: 265 YDPYLDVALEIRQAAN-IVRALELFVKADV------LSGENAYMCAKCKKKVPASKRFTI 317
Query: 303 YLTIQFVRFFWKRESN-QKAKILRKVDYPLELDVYDFCSDD 342
+ T + KR +N KI + V YP L++ + S +
Sbjct: 318 HRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQN 358
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDD 451
+Y L AVL H G S +GHY +VK +G+W + +D
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMND 399
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 101/269 (37%), Gaps = 40/269 (14%)
Query: 102 HSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFND 161
H GL N GNTCY NS +Q L+ + ++ Y R + L ++LF+
Sbjct: 37 HYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKE------NLLTCLADLFHS 90
Query: 162 L---DKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSL----- 213
+ + V + P +F LRK+ F +MQQDA E LL T++ L
Sbjct: 91 IANQKRKVGVIPPKKFITRLRKENELF-----DNYMQQDAHEFLNYLLNTIADLLQEERK 145
Query: 214 ------RSVNAS----------EIPDT-VKALFGIDIVSRVHCQESGEESSETESIYALK 256
R N S P T V +F + + C SS+ E L
Sbjct: 146 QDKTNGRLANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLS 205
Query: 257 CHISHE--VNHLHEGLKH--GLKSELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFF 312
+ + H G + L SE + K + LP L + RF
Sbjct: 206 VDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFK 265
Query: 313 WKRESNQKAKILRKVDYPLELDVYDFCSD 341
+ + + K+ +V +PLEL +++ D
Sbjct: 266 YMEQLQRYTKLSYRVVFPLELRLFNTSGD 294
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 416 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+YDLVAV+ H G + GHY+A VK W+ +DDD
Sbjct: 301 LYDLVAVVVHCGSGPNRGHYIAIVKSHDF-WLLFDDD 336
>sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana
GN=UBP10 PE=2 SV=2
Length = 923
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 101 GHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHM-----LTVAT 155
G AGL NLGNTC+MNS +QCL P +++Y S+D+++ + + L +A
Sbjct: 301 GGLAGLSNLGNTCFMNSALQCLAHTP----PIVEYFLQDYSDDINRDNPLGMCGELAIAF 356
Query: 156 SELFNDLDKSVK-PVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLR 214
+L L S + VAP F L + PQF + Q D++E LL L + L
Sbjct: 357 GDLLKKLWSSGRNAVAPRAFKTKLARFAPQF-----SGYNQHDSQELLAFLLDGLHEDLN 411
Query: 215 SV 216
V
Sbjct: 412 KV 413
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 101 GHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHM-----LTVAT 155
G AGL NLGNTC+MNS +QCL P +++Y S+D+++ + + L +A
Sbjct: 300 GGLAGLSNLGNTCFMNSALQCLAHTP----PIVEYFLQDYSDDINRDNPLGMCGELAIAF 355
Query: 156 SELFNDLDKSVK-PVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLR 214
+L L S + VAP F L + PQF + Q D++E LL L + L
Sbjct: 356 GDLLKKLWSSGRNSVAPRAFKTKLARFAPQF-----SGYNQHDSQELLAFLLDGLHEDLN 410
Query: 215 SV 216
V
Sbjct: 411 KV 412
>sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana
GN=UBP5 PE=1 SV=2
Length = 924
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSEL-FNDL 162
GL NLGNTC+MNS IQCL PE S Y Q +++ + + V L F DL
Sbjct: 317 TGLLNLGNTCFMNSAIQCLVHTPEFAS----YFQEDYHQEINWQNPLGMVGELALAFGDL 372
Query: 163 DKSV-----KPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSV 216
+ + P+AP F L + PQF + Q D++E LL L + L V
Sbjct: 373 LRKLWAPGRTPIAPRPFKAKLARFAPQF-----SGYNQHDSQELLAFLLDGLHEDLNRV 426
>sp|Q8NFA0|UBP32_HUMAN Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens GN=USP32
PE=1 SV=1
Length = 1604
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 18/123 (14%)
Query: 103 SAGLFNLGNTCYMNSTIQCLHSVPELKSALIK---YSQSGRSNDVDQSSHMLTVATSELF 159
+ GL NLGNTC+MNS+IQC+ + L I + R+N + HM ++ +
Sbjct: 733 ATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHM-----AKCY 787
Query: 160 NDLDKSV-----KPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLR 214
DL + + K VAP++ + K P+F NG F QQD++E LL L + L
Sbjct: 788 GDLVQELWSGTQKNVAPLKLRWTIAKYAPRF----NG-FQQQDSQELLAFLLDGLHEDLN 842
Query: 215 SVN 217
V+
Sbjct: 843 RVH 845
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 386 SASNGSGESSVAS-SQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQESG 444
+ NG + + S++ T D ++T + IY+L A+ H G GHYV + K +
Sbjct: 1478 ACGNGYSNGQLGNHSEEDSTDDQREDTRIKPIYNLYAISCHSG-ILGGGHYVTYAKNPNC 1536
Query: 445 KWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSI 484
KW Y+D + ++I D AYI Y+ + I
Sbjct: 1537 KWYCYNDSSCKELHPDEI-------DTDSAYILFYEQQGI 1569
>sp|D3ZJ96|UBP28_RAT Ubiquitin carboxyl-terminal hydrolase 28 OS=Rattus norvegicus
GN=Usp28 PE=2 SV=2
Length = 1083
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 101 GHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYS------QSGRSNDVDQSSHMLTVA 154
G GL N+GNTC+ ++ IQ L +PE + ++ YS ++ RS+ ++ + M
Sbjct: 159 GWPVGLKNVGNTCWFSAVIQSLFQLPEFRRLVLSYSLPQNILENCRSH-TEKRNIMFMQE 217
Query: 155 TSELFNDL----DKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLS 210
LF L K V P A + LL+ G + QQD E +LL L
Sbjct: 218 LQYLFALLLGSNRKFVDPSAALD---LLK------GAFRSSEEQQQDVSEFTHKLLDWLE 268
Query: 211 QSLR-SVNASEIPDT------VKALFGIDIVSRVHCQESGEE--SSETESIYALKCHISH 261
+ + +VN + P T V+ +G + V G+ ++ET Y L+ + H
Sbjct: 269 DAFQLAVNVNSNPRTKSENPMVQLFYGTFLTEGVR---EGKPFCNNETFGQYPLQVNGYH 325
Query: 262 EVNHLHEGLKHGLKSELEKASPALGRSAVYLKESCINGLPRYLTIQFVRFFWKRESNQKA 321
++ E G E + A RS Y +E LP LT + RF + + Q
Sbjct: 326 NLDECLE----GAMVEGDIALLPSDRSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPE 381
Query: 322 KILRKVDYP--LELDVYDFCSDDLRKKLDAPRQKLRDE 357
KI K+++P + +D Y + S +L + +KL++E
Sbjct: 382 KIHNKLEFPQVIYMDRYMYKSKELIRSKRESIRKLKEE 419
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 417 YDLVAVLTHKGRSADSGHYVAWV-KQESGKWIEYDDDNPLPQREEDITKLSGGGDWHM-A 474
Y L AVL H+G+ A +GHY A++ Q W++Y+D + E++ + S GG ++ A
Sbjct: 590 YRLHAVLVHEGQ-ASAGHYWAYIYNQPRQIWLKYNDISVTESSWEELERDSYGGLRNVSA 648
Query: 475 YICMY 479
Y MY
Sbjct: 649 YCLMY 653
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 102/279 (36%), Gaps = 58/279 (20%)
Query: 102 HSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKY--SQSGRSNDVDQSSHMLTVATSELF 159
H GL N GNTCY NS +Q L+ + ++ Y Q + N L ++LF
Sbjct: 33 HYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKKKEN--------LLTCLADLF 84
Query: 160 NDL---DKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLR-- 214
+ + K V + P +F LRK+ F +MQQDA E LL T++ L+
Sbjct: 85 HSIATQKKKVGVIPPKKFISRLRKENDLF-----DNYMQQDAHEFLNYLLNTVADILQEE 139
Query: 215 ----------SVNASEI------------PDTVKALFGIDIVSRVHCQESGEESSETESI 252
N + I P V +F + + C SS+ E
Sbjct: 140 RKQEKQNGRLKNNGTAIATDTEPEQNKIDPTWVHEIFQGTLTNETRCLNCETVSSKDEDF 199
Query: 253 YALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESC----------INGLPR 302
L + + H L+ + Y + C + LP
Sbjct: 200 LDLSVDVEQNT-----SITHCLR-DFSNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPM 253
Query: 303 YLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSD 341
L + RF + + ++ K+ +V +PLEL +++ D
Sbjct: 254 ILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGD 292
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 411 THLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDD 452
+L +YDLVAV+ H G + GHY+ VK G W+ +DDD
Sbjct: 294 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH-GFWLLFDDD 334
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 132/353 (37%), Gaps = 81/353 (22%)
Query: 104 AGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVDQSSHMLTVATSELFNDLD 163
GL N G TCYMNS +Q L+ +P + A+ Y ND +S + +A LF L
Sbjct: 199 VGLKNQGATCYMNSLLQTLYHIPYFRKAV--YHMPTTENDAPTAS--IPLALQSLFYKLQ 254
Query: 164 KSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSVNASEIPD 223
+ VA + L K FG +FMQ D +E L L ++ + +
Sbjct: 255 YNDTSVATKE----LTK---SFGWDTYDSFMQHDVQELNRVLCEKLEDKMK---GTVVEG 304
Query: 224 TVKALFGIDIVSRVHCQESGEESSETESIYALKCHIS--HEVNHLHEGLKHGLKSELEKA 281
T++ LF ++ + C +S+ ES Y L+ + +V + + E +
Sbjct: 305 TIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNK 364
Query: 282 SPALGRSAVYLKESCIN-GLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCS 340
A G K+ + P L +Q RF + + KI + ++PLELD
Sbjct: 365 YHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELD------ 418
Query: 341 DDLRKKLDAPRQKLRDEEGKKLGLKGGEKSSNSKDNDVKMTEAEGSASNGSGESSVASSQ 400
L E+GK L +A+ S N
Sbjct: 419 -------------LDREDGKYLS-----------------PDADRSVRN----------- 437
Query: 401 DGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEYDDD 452
+Y L +VL H G GHY A+++ S +W ++DD+
Sbjct: 438 ---------------LYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQWYKFDDE 474
>sp|Q6P8X6|UBP50_MOUSE Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Mus musculus
GN=Usp50 PE=2 SV=1
Length = 390
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 131/317 (41%), Gaps = 46/317 (14%)
Query: 89 EDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRS-NDVDQS 147
+ LPE + GL NLGNTCYMN+ +QCL SV S L++Y SG+ + +
Sbjct: 30 DSLPESKTQPHFQGVTGLRNLGNTCYMNAILQCLCSV----SPLVEYFLSGKYITALKKD 85
Query: 148 SHMLTVATSELFNDL---DKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQ 204
+T A + L D+ D V+P F + YP F + QQDA+E
Sbjct: 86 CSEVTTAFAYLMTDMWLGDSDC--VSPEIFLSAVGSLYPAFLKK-----TQQDAQEFLIY 138
Query: 205 LLYTLSQSL-----RSVN--------ASEIP----DTVKALFGIDIVSRVHC--QESGEE 245
+L L ++L R VN ++P + LF + + C ES
Sbjct: 139 VLNELHEALKKHCRRRVNEKRTGQSCCRKVPAQETSIITRLFEGQLSYSITCLKCESCTH 198
Query: 246 SSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKE-----SCINGL 300
+E +I +L +E + L + L+ + + S + S +K+ + I+ +
Sbjct: 199 KNEVFTILSLPIPSDYECS-LQDCLQCFFQQDTLTWSNQIYCSFCEIKQEAAVRTTISKV 257
Query: 301 PRYLTIQFVRFFWKRESNQKAKILRKVDYPL-ELDVYDFCSDDLRKKLDAPRQKLRDEEG 359
P+ + F RF + K K+ + YPL LD+ + RK P L
Sbjct: 258 PKIIVFHFKRF--DIQGTVKRKLRTDIHYPLTNLDLTPYICPVFRKH---PMYNLCAVVN 312
Query: 360 KKLGLKGGEKSSNSKDN 376
L GG ++ K++
Sbjct: 313 HFGDLDGGHYTAFCKNS 329
>sp|P35125|UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6
PE=1 SV=2
Length = 1406
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 103 SAGLFNLGNTCYMNSTIQCLHSVPELKSALIK---YSQSGRSNDVDQSSHMLTV---ATS 156
+ GL NLGNTC+MNS+IQC+ + L I + R+N + HM
Sbjct: 531 ATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQ 590
Query: 157 ELFNDLDKSVKPVAPMQFWMLLRKKYPQFGQLHNGTFMQQDAEECWTQLLYTLSQSLRSV 216
EL++ KS VAP++ + K P+F F QQD++E LL L + L V
Sbjct: 591 ELWSGTQKS---VAPLKLRRTIAKYAPKF-----DGFQQQDSQELLAFLLDGLHEDLNRV 642
Query: 217 N 217
+
Sbjct: 643 H 643
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 364 LKGGEKSSNSKDNDVKMTEAEG------SASNGSGESSVAS-----SQDGVTTDTDKETH 412
++GG + D ++ A G + NG G+ S++ T D ++TH
Sbjct: 1248 MRGGSQPELVTPQDHEVALANGFLYEHEACGNGCGDGYSNGQLGNHSEEDSTDDQREDTH 1307
Query: 413 LTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPLPQREEDITKLSGGGDWH 472
+ IY+L A+ H G GHY+ + K + KW Y+D + ++I D
Sbjct: 1308 IKPIYNLYAISCHSG-ILSGGHYITYAKNPNCKWYCYNDSSCEELHPDEI-------DTD 1359
Query: 473 MAYICMYKARSI 484
AYI Y+ + I
Sbjct: 1360 SAYILFYEQQGI 1371
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,965,320
Number of Sequences: 539616
Number of extensions: 8086570
Number of successful extensions: 19842
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 19072
Number of HSP's gapped (non-prelim): 704
length of query: 486
length of database: 191,569,459
effective HSP length: 121
effective length of query: 365
effective length of database: 126,275,923
effective search space: 46090711895
effective search space used: 46090711895
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)