Query 011411
Match_columns 486
No_of_seqs 174 out of 1196
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 07:35:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011411.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011411hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kae_A HDH, histidinol dehydro 100.0 7E-166 3E-170 1280.4 41.7 420 50-477 5-430 (434)
2 4gic_A HDH, histidinol dehydro 100.0 2E-161 6E-166 1245.6 36.3 413 46-463 4-423 (423)
3 3my7_A Alcohol dehydrogenase/a 97.4 0.028 9.6E-07 58.4 23.3 327 72-440 27-446 (452)
4 4ghk_A Gamma-glutamyl phosphat 97.2 0.068 2.3E-06 55.5 23.6 329 73-440 47-436 (444)
5 3etf_A Putative succinate-semi 97.1 0.19 6.4E-06 52.3 25.3 318 72-440 49-458 (462)
6 3r31_A BADH, betaine aldehyde 96.9 0.37 1.3E-05 51.1 26.2 318 73-441 73-486 (517)
7 4e4g_A Methylmalonate-semialde 96.9 0.35 1.2E-05 51.4 25.7 321 73-441 85-503 (521)
8 4h7n_A Aldehyde dehydrogenase; 96.8 0.28 9.5E-06 51.3 23.4 287 130-440 88-460 (474)
9 3k2w_A Betaine-aldehyde dehydr 96.8 0.44 1.5E-05 50.2 25.1 327 73-441 71-486 (497)
10 4dng_A Uncharacterized aldehyd 96.7 0.37 1.3E-05 50.4 24.3 319 72-440 64-475 (485)
11 2w8n_A Succinate-semialdehyde 96.7 0.85 2.9E-05 47.9 27.9 323 72-440 68-483 (487)
12 3ros_A NAD-dependent aldehyde 96.6 0.18 6.1E-06 53.1 21.0 321 72-441 46-456 (484)
13 3k9d_A LMO1179 protein, aldehy 96.6 0.87 3E-05 47.4 27.1 330 72-443 32-449 (464)
14 1vlu_A Gamma-glutamyl phosphat 96.6 0.23 7.8E-06 52.1 21.1 338 71-441 33-438 (468)
15 3jz4_A Succinate-semialdehyde 96.5 0.97 3.3E-05 47.2 28.6 320 74-440 69-478 (481)
16 1o04_A Aldehyde dehydrogenase, 96.5 0.77 2.6E-05 48.5 24.8 320 74-441 82-493 (500)
17 1t90_A MMSDH, probable methylm 96.5 0.93 3.2E-05 47.5 25.2 323 72-441 63-478 (486)
18 3ifg_A Succinate-semialdehyde 96.5 1.1 3.8E-05 47.0 29.0 326 73-440 71-481 (484)
19 3prl_A NADP-dependent glyceral 96.4 1.2 4.2E-05 47.0 28.3 324 72-441 69-481 (505)
20 2ve5_A BADH, betaine aldehyde 96.4 0.27 9.4E-06 51.4 20.6 320 74-440 66-480 (490)
21 3v4c_A Aldehyde dehydrogenase 96.4 0.84 2.9E-05 48.3 24.2 264 158-445 162-520 (528)
22 2j6l_A Aldehyde dehydrogenase 96.3 1.5 5E-05 46.3 30.3 320 72-440 79-496 (500)
23 3lns_A Benzaldehyde dehydrogen 96.2 0.6 2.1E-05 48.5 21.6 325 72-441 48-455 (457)
24 3ed6_A Betaine aldehyde dehydr 96.2 1.7 5.8E-05 46.1 29.2 322 72-440 92-507 (520)
25 3u4j_A NAD-dependent aldehyde 96.2 1.7 5.9E-05 46.2 28.4 321 73-441 84-496 (528)
26 3ek1_A Aldehyde dehydrogenase; 96.1 1.7 5.9E-05 45.9 29.6 317 74-440 92-499 (504)
27 1o20_A Gamma-glutamyl phosphat 96.1 1.4 4.8E-05 45.4 23.9 326 72-441 34-420 (427)
28 3r64_A NAD dependent benzaldeh 96.1 1.6 5.5E-05 46.0 24.6 323 74-440 72-482 (508)
29 1bxs_A Aldehyde dehydrogenase; 95.9 1.4 4.8E-05 46.5 22.8 320 74-441 83-494 (501)
30 4f3x_A Putative aldehyde dehyd 95.8 2.3 8E-05 44.8 25.5 319 72-440 82-494 (498)
31 3ju8_A Succinylglutamic semial 95.8 2.3 7.9E-05 44.6 28.0 320 74-437 64-465 (490)
32 3iwj_A Putative aminoaldehyde 95.8 1.1 3.7E-05 47.2 21.6 327 72-441 70-487 (503)
33 2d4e_A 5-carboxymethyl-2-hydro 95.7 0.37 1.3E-05 51.1 17.7 319 74-440 86-502 (515)
34 3qan_A 1-pyrroline-5-carboxyla 95.7 2.8 9.6E-05 44.7 28.5 323 72-441 94-514 (538)
35 2o2p_A Formyltetrahydrofolate 95.7 0.75 2.6E-05 48.8 19.9 322 72-440 96-514 (517)
36 3haz_A Proline dehydrogenase; 95.3 0.95 3.2E-05 52.1 20.5 285 127-440 608-984 (1001)
37 1a4s_A ALDH, betaine aldehyde 95.3 3.5 0.00012 43.4 26.6 321 72-441 78-494 (503)
38 3i44_A Aldehyde dehydrogenase; 95.0 3.4 0.00012 43.5 22.2 315 72-439 83-494 (497)
39 1ez0_A ALDH, aldehyde dehydrog 94.8 1.1 3.9E-05 47.1 18.1 261 159-442 130-482 (510)
40 3pqa_A Lactaldehyde dehydrogen 94.6 5.4 0.00018 41.9 24.7 328 73-444 55-465 (486)
41 2wme_A BADH, betaine aldehyde 94.5 4.7 0.00016 42.4 21.8 317 74-439 66-479 (490)
42 3rh9_A Succinate-semialdehyde 94.5 5.7 0.00019 42.0 25.2 327 72-446 69-487 (506)
43 1uxt_A Glyceraldehyde-3-phosph 94.3 6.1 0.00021 41.6 26.8 324 74-441 77-490 (501)
44 3sza_A Aldehyde dehydrogenase, 94.3 6.1 0.00021 41.2 26.3 327 71-441 37-446 (469)
45 4f9i_A Proline dehydrogenase/d 94.2 4.6 0.00016 46.6 22.4 260 154-441 655-1008(1026)
46 2imp_A Lactaldehyde dehydrogen 94.2 6.3 0.00021 41.1 27.4 319 73-441 65-477 (479)
47 1uzb_A 1-pyrroline-5-carboxyla 94.2 6.7 0.00023 41.4 23.4 323 72-440 94-513 (516)
48 1euh_A NADP dependent non phos 93.9 7 0.00024 40.7 27.4 322 73-440 61-471 (475)
49 3b4w_A Aldehyde dehydrogenase; 93.2 9.7 0.00033 40.0 27.5 321 72-440 68-479 (495)
50 1wnd_A Putative betaine aldehy 92.8 11 0.00037 39.7 26.8 316 72-440 80-492 (495)
51 3ty7_A Putative aldehyde dehyd 91.0 17 0.00056 37.9 26.3 319 73-440 66-474 (478)
52 2h5g_A Delta 1-pyrroline-5-car 82.0 2.7 9.3E-05 43.9 7.6 328 73-441 50-433 (463)
53 2y53_A Aldehyde dehydrogenase 64.8 10 0.00035 40.1 6.8 92 353-448 410-523 (534)
54 4e3x_A Delta-1-pyrroline-5-car 63.2 14 0.00047 39.7 7.4 256 160-441 194-549 (563)
55 3qfu_A 78 kDa glucose-regulate 49.2 20 0.00067 35.1 5.4 74 196-291 153-226 (394)
56 3i33_A Heat shock-related 70 k 38.4 33 0.0011 33.8 5.1 75 196-289 158-232 (404)
57 4gni_A Putative heat shock pro 34.8 38 0.0013 33.6 4.8 74 196-289 150-223 (409)
58 1dkg_D Molecular chaperone DNA 29.2 62 0.0021 31.6 5.3 75 196-292 135-209 (383)
59 1jce_A ROD shape-determining p 26.9 81 0.0028 30.3 5.6 73 196-291 95-167 (344)
60 1vr0_A Probable 2-phosphosulfo 23.8 49 0.0017 32.2 3.3 69 344-421 45-118 (247)
61 2kho_A Heat shock protein 70; 22.4 76 0.0026 33.9 4.8 49 196-245 135-183 (605)
62 4b9q_A Chaperone protein DNAK; 20.3 91 0.0031 33.3 4.9 49 196-245 135-183 (605)
No 1
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=100.00 E-value=7.5e-166 Score=1280.42 Aligned_cols=420 Identities=48% Similarity=0.776 Sum_probs=403.8
Q ss_pred EEEecCCCCHHHHHHHhcCCCC-CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHH
Q 011411 50 KSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAV 126 (486)
Q Consensus 50 ~~~~~~~~~~~~~~~~l~r~~~-~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~ 126 (486)
.+++|...+..++..++.|+.. +..++.+.|++||++||++||+||++||+|||++++++|+||++||++| ++|+++
T Consensus 5 ~~~~~~~~~~~~~~~l~~r~~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~~~~~~ 84 (434)
T 1kae_A 5 TIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDEL 84 (434)
T ss_dssp SEEEGGGSCHHHHHHHTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCCHHHHHHHHHHSCHHH
T ss_pred hhhccccCCHHHHHHHhcCcccccHHHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccCHHHHHHHHHhCCHHH
Confidence 3556776677777777777655 5578999999999999999999999999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCC
Q 011411 127 KEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 206 (486)
Q Consensus 127 ~~ai~~A~~nI~~Fh~~Q~~~~~~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~ 206 (486)
++||+.|++||++||++|++++|.++..+|++|||+|+||+|||||||||+|+||||||||+||||||||++|||||||
T Consensus 85 ~~ai~~A~~nI~~fH~~Q~~~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp- 163 (434)
T 1kae_A 85 KQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPP- 163 (434)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECS-
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEecCCcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCC-
Confidence 9999999999999999999999888888899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHh---cCCCCcccccCCCCCc
Q 011411 207 QDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL---QNSEAMISIDMPAGPS 283 (486)
Q Consensus 207 ~~G~i~p~iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v---~~~~~~VgID~~AGPS 283 (486)
++||++|+||++|||+|||++|||||||||||||||||||||||||||+|||+|||+| ++ .|||||+||||
T Consensus 164 ---~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G---~VgIDm~AGPS 237 (434)
T 1kae_A 164 ---PIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD---GAAIDMPAGPS 237 (434)
T ss_dssp ---SCCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT---SCEESCCCCCC
T ss_pred ---CCCHHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC---ccccCCCCCCc
Confidence 5999999999999999999999999999999999999999999999999999999988 55 59999999999
Q ss_pred EEEEEecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCcHHHHHHHHhCCeEEEeCCHHHH
Q 011411 284 EVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEG 363 (486)
Q Consensus 284 EvlIIAD~sAnp~~vAaDLLaQAEHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r~~ia~~sl~~g~iivv~~l~ea 363 (486)
||+||||++|||+|||+||||||||||+|++||||+|++++ ++|.++|++||+.|||++|+++||+++.+|+|+|++||
T Consensus 238 EilViAD~tAnp~~vAaDLLsQAEHd~~a~aiLvT~s~~la-~~V~~ev~~ql~~lpr~~ia~~sl~~~~ii~v~~l~ea 316 (434)
T 1kae_A 238 EVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAADMA-RRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQC 316 (434)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHHTTCTTHHHHHHHHTTCEEEECSSHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHcCeEEEECCHHHH
Confidence 99999999999999999999999999999999999999996 99999999999999999999999985599999999999
Q ss_pred HHHhhhhccccceecccChHHHHhhccccceeccCCCCCccccccccCCCCCCCCCCccccccCCcccccceeeeEEEeC
Q 011411 364 ISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLT 443 (486)
Q Consensus 364 i~~aN~~APEHLel~~~~p~~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~SgLsV~dFlK~~s~~~~s 443 (486)
++++|+||||||||+++||++++++|+||||||||+||||++|||++||||||||+|+|||+|||||+||||++|+|+||
T Consensus 317 ~~~~N~~APEHLel~~~dp~~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G~AR~~sgLsV~~F~K~~s~~~~s 396 (434)
T 1kae_A 317 VEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELS 396 (434)
T ss_dssp HHHHHHHCCSEEEEESTTHHHHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTTGGGTCCCSCGGGGEEEEEEEEEC
T ss_pred HHHHHHhhhHhhhhhhcCHHHHHhhcCcccchhcCCCCchhhcccccCCCcccCCCCceeccCCCcHHhccceeeEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHhhCCHHHHHHHHHHHhhh
Q 011411 444 EEGLKKLGPYVATMAEIEGLEAHKRAVTFRLQDI 477 (486)
Q Consensus 444 ~~~l~~l~~~~~~LA~~EGL~aHa~sv~~R~~~~ 477 (486)
+++++++++++.+||++|||++|++|+++|+++.
T Consensus 397 ~~~l~~l~~~~~~lA~~EGL~aHa~av~~R~~~~ 430 (434)
T 1kae_A 397 KEGFSALASTIETLAAAERLTAHKNAVTLRVNAL 430 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999764
No 2
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=100.00 E-value=1.8e-161 Score=1245.56 Aligned_cols=413 Identities=35% Similarity=0.530 Sum_probs=360.5
Q ss_pred ceeeEEEecCCCCHH-HHHHHhcCCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCC---ceeeCCCCCCCC-
Q 011411 46 QCSMKSYRLSELTHA-EVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE---KVVENVSELPDP- 120 (486)
Q Consensus 46 ~~~m~~~~~~~~~~~-~~~~~l~r~~~~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~---~l~Vs~~ei~~A- 120 (486)
.+.|++++..+.++. ++.+++.|+..+.+++.+.|++||++||++||+||++||+|||+++++ .|+||++||++|
T Consensus 4 ~~~ik~L~~~~~~f~~~l~~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~ 83 (423)
T 4gic_A 4 EVKIKRLYTGDADFASQLDRLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAW 83 (423)
T ss_dssp CCCCEEEETTCTTHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHH
T ss_pred cceeEEecCCCCCHHHHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHH
Confidence 467889988877754 577888888888899999999999999999999999999999999864 599999999998
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeE
Q 011411 121 -ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTV 199 (486)
Q Consensus 121 -~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~I 199 (486)
.+|+++++||+.|++||++||++|++++|.+++.+|+++||+|+||+|||||||||+|+|||||||++||||||||++|
T Consensus 84 ~~l~~~~~~ai~~A~~~I~~fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~I 163 (423)
T 4gic_A 84 QALPAEQAKALREAAERIRAYAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPEL 163 (423)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCC
Q 011411 200 VLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMP 279 (486)
Q Consensus 200 v~~TPP~~~G~i~p~iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~~~VgID~~ 279 (486)
|||||| ++|++||++|+||++|||+|||++|||||||||||||||||||||||||||+||++|||+|++ .|||||+
T Consensus 164 v~~tPp-~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g---~VgIDm~ 239 (423)
T 4gic_A 164 IMAVPA-PRGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG---QVGIDMV 239 (423)
T ss_dssp EEECCC-GGGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT---TBEECCC
T ss_pred EEecCC-CCCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC---CcCcccc
Confidence 999999 689999999999999999999999999999999999999999999999999999999998876 3999999
Q ss_pred CCCcEEEEEecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCcHHHHHHHHh-CCeEEEeC
Q 011411 280 AGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFAR 358 (486)
Q Consensus 280 AGPSEvlIIAD~sAnp~~vAaDLLaQAEHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r~~ia~~sl~-~g~iivv~ 358 (486)
|||||++||||++|||+|||+||||||||||+|++||||+|++++ ++|.++|++||+.|||++|+++||+ +|.+|+|+
T Consensus 240 AGPSEilViAD~~a~p~~vAaDLlsQAEHd~~a~~iLvT~s~~la-~~V~~~i~~~l~~l~r~~i~~~sl~~~g~ii~v~ 318 (423)
T 4gic_A 240 AGPSEILVISDGRTDPDWIAMDLFSQAEHDEDAQAILISPDAAHL-EAVQASIERLLPGMERAEVIRTSLERRGGMILVD 318 (423)
T ss_dssp CCCCEEEEEECSCSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHGGGCTTHHHHHHHHHHHCEEEECS
T ss_pred cccceEEEEeCCCCCHHHHHHHHHHhhccCCCCeEEEEeCcHHHH-HHHHHHHHHHHhhCccHHHHHHHHhcCceEEEEe
Confidence 999999999999999999999999999999999999999999996 9999999999999999999999998 69999999
Q ss_pred CHHHHHHHhhhhccccceecccChHHHHhhccccceeccCCCCCccccccccCCCCCCCCCCccccccCCcccccceeee
Q 011411 359 DMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMT 438 (486)
Q Consensus 359 ~l~eai~~aN~~APEHLel~~~~p~~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~SgLsV~dFlK~~s 438 (486)
|++||++++|+||||||||+++||++++++|+||||||||+||||++|||++||||||||+|+|||+|||||+||||++|
T Consensus 319 ~~~ea~~~~N~~APEHLel~~~~~~~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s 398 (423)
T 4gic_A 319 DLEQAAAVANRIAPEHLELSVESPEVLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSS 398 (423)
T ss_dssp SHHHHHHHHHHHCCSEEEEESSCHHHHGGGCCCCSEEEEC----------------CCCCTTGGGTCCCCCGGGGEEEEE
T ss_pred ehHHHHHHHHhhChHHhhhhhCCHHHHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCHHHHHhhhHHHHHHHHhhCC
Q 011411 439 VQSLTEEGLKKLGPYVATMAEIEGL 463 (486)
Q Consensus 439 ~~~~s~~~l~~l~~~~~~LA~~EGL 463 (486)
+|++|++|++++++++.+||++|||
T Consensus 399 ~~~~s~~~l~~l~~~~~~lA~~EgL 423 (423)
T 4gic_A 399 LIYCSPDGADQLGRTASLLAWGEGL 423 (423)
T ss_dssp EEC----------------------
T ss_pred EEEECHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998
No 3
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=97.40 E-value=0.028 Score=58.43 Aligned_cols=327 Identities=15% Similarity=0.123 Sum_probs=169.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~ 151 (486)
..++..+.++.+-+.++++.|+=..-.++..-+- +......-+..+.+.++++.+.++... .+
T Consensus 27 ~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~----------------~~e~~~~~~~~a~~~~~~~~~~~~~~g-~~ 89 (452)
T 3my7_A 27 SQEQVDKIFRAASLAANQARIPLAQQAVEESGMG----------------IVEDKVIKNHFASEFIYNKYKDEQTCG-IL 89 (452)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCS----------------CHHHHHHHHHHHHHHHHHHHTTCCCSE-EC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHhhhccccc-cc
Confidence 3444555566666666666554433333333221 111111124567777766655443221 11
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHHH--------HHHHHHc
Q 011411 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV--------LYCAKKA 222 (486)
Q Consensus 152 ~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i--------LaAA~l~ 222 (486)
...++...-.+..|+.-|++.+|.- || ++++..++||-.+|+.=| +-|.. ..|.+ ..++..+
T Consensus 90 ~~~~~~~~~~~~~P~GVv~~I~P~N---~P~~~~~~k~~~ALaaGN~VV--lKps~----~tp~~~~~~~~~~~~a~~~a 160 (452)
T 3my7_A 90 EEDDNLGTMTIAEPVGIICGIVPTT---NPTSTAIFKSLISLKTRNGII--FSPHP----RAKNSTNDAAKLVLDAAVAA 160 (452)
T ss_dssp -------CEEEEEECCEEEEEECTT---STTHHHHHHHHHHHHTTCEEE--EEECG----GGHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCceEEEecCceEEEEEcCCC---ChHHHHHHHHHHHHhcCCeEE--EEcCC----CchHHHHHHHHHHHHHHHHc
Confidence 2223333456789999999999963 45 456677889999996543 44431 23321 1233457
Q ss_pred CCcc-hhh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011411 223 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 298 (486)
Q Consensus 223 Gv~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~v 298 (486)
|+.+ ++. -| |...-.+|.= -|.||+|.=-|..=+. |..... +.--+ .-|+.---+|-|++||.+..
T Consensus 161 G~P~gvv~~v~g~~~~~~~~L~~----~p~v~~V~fTGs~~~~--~~a~~~--~kp~~--~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 161 GAPKDIIGWIDQPSVELSNALMK----HDDIALILATGGPGMV--KAAYSS--GKPAI--GVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp TCCTTSEEECSSCCHHHHHHHHH----CTTCCEEEECSCHHHH--HHHHTS--SSCEE--ECC--CEEEEECTTSCHHHH
T ss_pred CCCcCcEEEEcCCCHHHHHHHHh----CCCccEEEEECcHHHH--HHHHhc--CCCEE--ecCCCCCeEEEeCCCCHHHH
Confidence 7753 332 24 6666666652 5789999866665443 222111 00112 23333445667888999999
Q ss_pred HHhhhhccCcCCC----Cc-eEEEecCchhhHHHHHHHHHH----------------HHhcCC----------cHHHHHH
Q 011411 299 AADLLSQAEHGPD----SQ-VVLVIVGDGVDLDAIEQEISK----------------QCQSLP----------RGEFASK 347 (486)
Q Consensus 299 AaDLLaQAEHdp~----a~-avLvT~s~~la~~~V~~~i~~----------------ql~~l~----------r~~ia~~ 347 (486)
|.+++.-+=++.. |. .++|-. +.. +++.+++.+ .+.... +..++..
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~--~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~~~~~~a~v~G~~~~~~~~~ 307 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVD--EVY-DEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEM 307 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEG--GGH-HHHHHHHHTTTEEECCHHHHHHHHHHHEETTEECGGGTTCCHHHHHHH
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcH--HHH-HHHHHHHHHhCCCcCCHHHHHHHHHHHHhhcccCCeEecCccchhHHh
Confidence 9998876655542 22 344433 343 665554433 222110 1111110
Q ss_pred ------------------------HH--h-CC---eEEEeCCHHHHHHHhhhh-----ccccceecccChH---H---HH
Q 011411 348 ------------------------AL--G-HS---FMVFARDMLEGISFSNLY-----APEHLIVNVKDAE---K---WE 386 (486)
Q Consensus 348 ------------------------sl--~-~g---~iivv~~l~eai~~aN~~-----APEHLel~~~~p~---~---~l 386 (486)
.+ + .| .++.++|+|||++++|.. .+--..|+++|.. . +.
T Consensus 308 ~G~~v~pt~~vl~~~~~~~v~~~~~~~~E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a 387 (452)
T 3my7_A 308 AGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFG 387 (452)
T ss_dssp HTCCCCTTCCEEEEECSSSCCTTCGGGSCCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHH
T ss_pred CCceeCCCeeEEeeccccCCCCcchhhcCccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHH
Confidence 01 1 13 345689999999999997 4677889998853 4 66
Q ss_pred hhccccceeccCCCCCccccccccCCCCCCC------CCCcc--ccccCCcccccceeeeEE
Q 011411 387 SIIENAGSVFLGEWTPESVGDYASGTNHVLP------TYGYA--RMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 387 ~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLP------T~G~A--R~~SgLsV~dFlK~~s~~ 440 (486)
.+++ +|.|++.. |.++|-+-...|+.|| ++.+. -.+..+++.++|...++-
T Consensus 388 ~~l~-~G~V~VN~--~~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~ 446 (452)
T 3my7_A 388 DKMK-TARILINI--PTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVA 446 (452)
T ss_dssp HHCC-CSEEEESC--CCC----------------------------CCCCCGGGGEEEEEEE
T ss_pred HhCC-EEEEEECC--CCCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEE
Confidence 6775 99999997 5556544444554444 33332 235568888988655543
No 4
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=97.21 E-value=0.068 Score=55.48 Aligned_cols=329 Identities=13% Similarity=0.116 Sum_probs=180.2
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 152 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~~ 152 (486)
..+-.+.++.+.+.++++.|+=....++.+.+-.... +++...++..+. ..-+..+++.++.|...-.+......
T Consensus 47 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g--~~ea~~~~~~~~---~~~v~~~~~~l~~~a~~~~~~g~~~~ 121 (444)
T 4ghk_A 47 TAAKNAALEAVARAIERDAGALKAANARDVARAKDKG--LDAAFVDRLTLS---DKALKTMVEGLRQVATLPDPIGEMSN 121 (444)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC--------CCSHHHHHCCC---TTHHHHHHHHHHHHHHSCCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhcc--chHHHHHHhhcc---HHHHHHHHHHHHHHHhhccccCccCC
Confidence 3444556777777778887766655566554321000 111111000000 01366677778877654332221111
Q ss_pred ---ecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHHH---HHHH-----HH
Q 011411 153 ---NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---LYCA-----KK 221 (486)
Q Consensus 153 ---~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i---LaAA-----~l 221 (486)
..+|...-.++.|+.-|++..|. . |...++-.+||-.||+. ||+-|.. ..|.+ |+-. ..
T Consensus 122 ~~~~~~~~~~~~~~~P~GVV~~I~p~---n-P~~~~~~~~~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~~~l~~ 191 (444)
T 4ghk_A 122 LKYRPSGIQVGQMRVPLGVIGIIYES---R-PNVTIDAAALCLKSGNA--TILRGGS----EALESNTALAKLIGEGLAE 191 (444)
T ss_dssp EEECTTSCEEEEEEEECSEEEEECCS---C-HHHHHHHHHHHHHTTCE--EEEECCG----GGHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCccceEEEeccEEEEEEeCC---C-cHHHHHHHHHHHHcCCE--EEEECCc----cchHHHHHHHHHHHHHHHH
Confidence 13466667789999999999995 2 56777888999999974 3444542 34432 2211 45
Q ss_pred cCCcc-hhhc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhc--CCCCcccccCCCCCcEEEEEecCCCCH
Q 011411 222 AGVTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQ--NSEAMISIDMPAGPSEVLVIADIYASP 295 (486)
Q Consensus 222 ~Gv~e-Iy~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~--~~~~~VgID~~AGPSEvlIIAD~sAnp 295 (486)
+|+.+ ++.+ | |...++++- .+-|+||+|.=-|..=|- |++.. .. .|- =-+-|=|= +|-|++||.
T Consensus 192 aGlP~gvv~vv~g~~~~~~~~~L---~~~p~vd~V~fTGs~~vg--~~v~~~a~~--pv~-lELGGk~p--~IV~~dADl 261 (444)
T 4ghk_A 192 AGLPQDTVQVVETADRAAVGRLI---TMTEYVDVIVPRGGKSLI--ERLINEARV--PMI-KHLDGICH--VYVDDRASV 261 (444)
T ss_dssp TTCCGGGEEECCCCCTHHHHHHT---TCTTTCSEEEECSCHHHH--HHHHHHCCS--CBC-CCCCCCCE--EEECTTCCH
T ss_pred cCCCcccEEEEeCCCHHHHHHHH---hcCCCccEEEEECcHHHH--HHHHHhCCC--CEE-EEcCCcCe--EEECCCCCH
Confidence 67643 4332 3 554444432 134889999877775432 22111 00 011 11234333 444667999
Q ss_pred HHHHHhhhhccCcCC---CCce-EEEecCchhhHHHHHHHHHHHHhcCCc--------HHHHHHH------------Hh-
Q 011411 296 VHIAADLLSQAEHGP---DSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR--------GEFASKA------------LG- 350 (486)
Q Consensus 296 ~~vAaDLLaQAEHdp---~a~a-vLvT~s~~la~~~V~~~i~~ql~~l~r--------~~ia~~s------------l~- 350 (486)
+..|..++.-+=... .|.. +||-. ++. +++.+.+.+.++.+.- ...++.+ +.
T Consensus 262 ~~Aa~~i~~~~~~n~G~C~a~~rvlV~~--~i~-d~f~~~l~~~~~~~~~~~~g~p~~~~~i~~a~~G~~~~~~~~~~~e 338 (444)
T 4ghk_A 262 TKALTVCDNAKTHRYGTCNTMETLLVAR--GIA-PAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDWRT 338 (444)
T ss_dssp HHHHHHCC---------CCCCCEEEEEG--GGH-HHHHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCCEECCSGGGTC
T ss_pred HHHHHHHHHHhcCCCcccCcCceEEEeH--HHH-HHHHHHHHHHHHHcCCeecCCHHHHHHHHhcccCcccCCCchhhhc
Confidence 988877664332222 2222 34432 343 7777777766665532 2344444 21
Q ss_pred --CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhccccceeccCCCCCccccccccCCCCCCCCCC
Q 011411 351 --HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG 420 (486)
Q Consensus 351 --~g---~iivv~~l~eai~~aN~~APEH--Lel~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G 420 (486)
.| .|+.++|+|||++++|.. |-. ..|.++|.. .+..++ .+|.|++..++.. +.-+|-+|
T Consensus 339 EiFGPVl~v~~~~~~deAi~~aN~~-~~gL~a~v~t~d~~~a~~~a~~l-~aG~V~vN~~~~~---------~~~~pfGg 407 (444)
T 4ghk_A 339 EYLAPVLAIKIVDGIDAAIEHINEY-GSHHTDAIVTEDHDRAMRFLREV-DSASVMVNASTRF---------ADGFEFGL 407 (444)
T ss_dssp C---CEEEEEEESSHHHHHHHHHHH-SCSSEEEEECSBHHHHHHHHHHC-CSSEEEEEECGGG---------CSTTTTTC
T ss_pred cccCceEEEEEeCCHHHHHHHHHhC-CCCceEEEEeCCHHHHHHHHHhC-CcceEEEcCCCcc---------CCCCCcCC
Confidence 14 356689999999999985 333 456677764 466666 4999999986541 12356655
Q ss_pred cc---------ccccCCcccccceeeeEE
Q 011411 421 YA---------RMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 421 ~A---------R~~SgLsV~dFlK~~s~~ 440 (486)
.. |+.|..+++.|+..-++.
T Consensus 408 ~~~sG~g~~~~~~~G~~gl~~~t~~K~v~ 436 (444)
T 4ghk_A 408 GAEIGISNDKLHARGPVGLEGLTSLKYVV 436 (444)
T ss_dssp SCCSEEECCSSSCCEEECGGGGEEEEEEE
T ss_pred cccccccCCcccCCChhHHHhhceEEEEE
Confidence 43 345667888888776654
No 5
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=97.08 E-value=0.19 Score=52.26 Aligned_cols=318 Identities=13% Similarity=0.154 Sum_probs=177.2
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc--CCCc
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK--SAET 149 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~--~~~~ 149 (486)
...+-.+..+++-+.++++.|+=..-.++..-+. -.+.+.-+..+++.++.|.+... ....
T Consensus 49 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~ 111 (462)
T 3etf_A 49 SVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP-----------------IKQARAEVTKSAALCDWYAEHGPAMLNPE 111 (462)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHhHHHhcCCc
Confidence 3445556677777777888776655555554321 01222224444555554433211 1111
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHHHcCC
Q 011411 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGV 224 (486)
Q Consensus 150 ~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~l~Gv 224 (486)
....+|...-.++.|+.-|++..|.- || ...+..++||-.||+.=| +-|.. ..|. +..+...+|+
T Consensus 112 -~~~~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~Vv--lKps~----~tp~~~~~l~~~l~~agl 181 (462)
T 3etf_A 112 -PTLVENQQAVIEYRPLGVILAIMPWN---FPLWQVLRGAVPILLAGNSYL--LKHAP----NVTGCAQMIARILAEAGT 181 (462)
T ss_dssp -ECSSGGGCEEEEEEECSEEEEECCSS---STTHHHHHHHHHHHHTTCEEE--EECCT----TCHHHHHHHHHHHHHTTC
T ss_pred -ccCCCCceeEEEeecCcEEEEECCCc---hHHHHHHHHHHHHHhcCCEEE--EECCC----CCcHHHHHHHHHHHHhCC
Confidence 11223555667889999999999963 44 344455789999998544 33432 3343 2234455676
Q ss_pred cc-hhh--cchHHHHHHHhhCCCCCCCceEEecCCcHHHHH------HHHHhcCCCCcccccCCCCCcEEEEEecCCCCH
Q 011411 225 TH-ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTA------AKMILQNSEAMISIDMPAGPSEVLVIADIYASP 295 (486)
Q Consensus 225 ~e-Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~------AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp 295 (486)
.+ ++. -|+.....+|. +-|+||+|.=-|..=|-. |+.+- .|-..+ -|-+= +|-|++||.
T Consensus 182 P~gv~~vv~g~~~~~~~l~----~~~~v~~v~fTGS~~~g~~i~~~aa~~~~-----~v~lEl-GGk~p--~iV~~dADl 249 (462)
T 3etf_A 182 PAGVYGWVNANNEGVSQMI----NDPRIAAVTVTGSVRAGAAIGAQAGAALK-----KCVLEL-GGSDP--FIVLNDADL 249 (462)
T ss_dssp CBTTEEECCCCHHHHHHHH----TSTTEEEEEEESCHHHHHHHHHHHHHTTC-----CEEEEC-CCCEE--EEECTTSCH
T ss_pred CcCeEEEEECCHHHHHHHh----cCCCCCEEEEeCCchHHHHHHHHHhccCC-----ceEEEc-CCCCc--cEECCCCCH
Confidence 53 221 35556666665 358899997666644322 22110 022222 14443 444677999
Q ss_pred HHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------c-------HHHHHHHH
Q 011411 296 VHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKAL 349 (486)
Q Consensus 296 ~~vAaDLLaQAEH----dp~a~avLvT~s~~la~~~V~~~i~~ql~~l~---------------r-------~~ia~~sl 349 (486)
+..|..++.-+=. .-.|...++.. +++. ++..+.+.+.++.+. + .+.++.+.
T Consensus 250 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 327 (462)
T 3etf_A 250 ELAVKAAVAGRYQNTGQVCAAAKRFIVE-EGIA-QAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASV 327 (462)
T ss_dssp HHHHHHHHHHHHGGGGCCTTCEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcccCCcEEEEe-hhHH-HHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHH
Confidence 9877776643322 22344444444 3343 666666666665432 0 12222222
Q ss_pred hC--------------------------------------C---eEEEeCCHHHHHHHhhhhc-cccceecccChH---H
Q 011411 350 GH--------------------------------------S---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---K 384 (486)
Q Consensus 350 ~~--------------------------------------g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~ 384 (486)
+. | .|+.++|+|||++++|..- +--..|.++|.. .
T Consensus 328 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~ 407 (462)
T 3etf_A 328 AEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAE 407 (462)
T ss_dssp HTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHH
T ss_pred HCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 11 2 2355799999999999853 223456778864 5
Q ss_pred HHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEE
Q 011411 385 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 385 ~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~SgLsV~dFlK~~s~~ 440 (486)
+..+++ +|.|++..++. .+.-+|-+| ..|..+.-+++.|+..-++.
T Consensus 408 ~~~~l~-aG~v~vN~~~~---------~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~ 458 (462)
T 3etf_A 408 MAARLE-CGGVFINGYSA---------SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458 (462)
T ss_dssp HHHHCC-SSEEEESSCCC---------CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHhCC-cceEEECCCCC---------CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEE
Confidence 666775 99999997642 123455544 45666666778887766553
No 6
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=96.91 E-value=0.37 Score=51.13 Aligned_cols=318 Identities=15% Similarity=0.098 Sum_probs=176.9
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc-----CC
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK-----SA 147 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~-----~~ 147 (486)
..+-.+..+.+-+.++++.|+=..-.++..-+-..+ . | +..+++.++.|...-. ..
T Consensus 73 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e----a-----------e----v~~~~~~~~~~a~~~~~~~~~~~ 133 (517)
T 3r31_A 73 PMARGRILKRAADIMRERNDALSTLETLDTGKPIQE----T-----------I----VADPTSGADAFEFFGGIAPSALN 133 (517)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH----H-----------H----HHSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH----H-----------H----HHHHHHHHHHHHHHhhhcccccc
Confidence 344455667777777777776555555555431100 0 1 2333444444332211 11
Q ss_pred CceEEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCc
Q 011411 148 ETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT 225 (486)
Q Consensus 148 ~~~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~-iLaAA~l~Gv~ 225 (486)
.......+|. .-.++.|+.-|++..|. -|| ...+.-++||-.||+.=| +=|.. .-..... +......+|+.
T Consensus 134 g~~~~~~~~~-~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VV--lKps~-~tp~t~~~l~~ll~eaGlP 206 (517)
T 3r31_A 134 GDYIPLGGDF-AYTKRVPLGVCVGIGAW---NYPQQIACWKAAPALVAGNAMV--FKPSE-NTPLGALKIAEILIEAGLP 206 (517)
T ss_dssp CCEEECSSSE-EEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT-TSCSHHHHHHHHHHHTTCC
T ss_pred CcccccCCCc-ceEEEcCccEEEEECCC---cchHHHHHHHHHHHHHcCCEEE--EEcCc-ccHHHHHHHHHHHHHhCcC
Confidence 2223334566 77889999999999996 355 444566789999997544 33432 1112222 33455667764
Q ss_pred c-hhh--cchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHH
Q 011411 226 H-ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 296 (486)
Q Consensus 226 e-Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~ 296 (486)
. ++. -||...-.+|. .-|.||+|.=-|..=| ++|+.+- .|-.. +-|-+= +|-|++||.+
T Consensus 207 ~gvv~vv~g~~~~g~~L~----~~p~vd~I~FTGS~~~G~~i~~~aa~~lk-----~v~lE-lGGk~p--~IV~~dADl~ 274 (517)
T 3r31_A 207 KGLFNVIQGDRDTGPLLV----NHPDVAKVSLTGSVPTGRKVAAAAAGHLK-----HVTME-LGGKSP--MIVFDDADIE 274 (517)
T ss_dssp TTSEEECCCCTTHHHHHH----TCTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCEE--EEECTTSCHH
T ss_pred cccEEEEECCHHHHHHHH----hCCCcCEEeccCCHHHHHHHHHHhhcCCC-----cEEEE-cCCcCe--EEEecCCCHH
Confidence 2 322 25666666665 3588999986664322 2222211 01111 123333 4446779999
Q ss_pred HHHHhhhhccCcCC----CCce-EEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHH
Q 011411 297 HIAADLLSQAEHGP----DSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL 349 (486)
Q Consensus 297 ~vAaDLLaQAEHdp----~a~a-vLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl 349 (486)
..|..++.-+=... .|.. +||-.+ .. +++.+.+.+.++.+.- .+.++.+.
T Consensus 275 ~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 351 (517)
T 3r31_A 275 SAVGGAMLGNFYSSGQVCSNGTRVFVQKK--AK-ARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGK 351 (517)
T ss_dssp HHHHHHHHHHTSCCHHHHTTCEEEEEEGG--GH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceeccCceEEEeHH--HH-HHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHH
Confidence 88877765443322 2333 444333 43 6666666555544320 01111111
Q ss_pred --------------------------------------h---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH-
Q 011411 350 --------------------------------------G---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE- 383 (486)
Q Consensus 350 --------------------------------------~---~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~- 383 (486)
. .| .|+.++|+|||++++|..- +--..|.++|..
T Consensus 352 ~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 431 (517)
T 3r31_A 352 AEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLAR 431 (517)
T ss_dssp HHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHH
T ss_pred hCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHH
Confidence 1 12 3456899999999999843 223456677764
Q ss_pred --HHHhhccccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEEE
Q 011411 384 --KWESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 384 --~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
.++.++ .+|.|++..++.. +.-+| -+|..|+.|..+++.|+..-++..
T Consensus 432 a~~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 486 (517)
T 3r31_A 432 AHRVVDGL-EAGTLWINTYNLC---------PVEIPFGGSKQSGFGRENSAAALEHYSELKTVYV 486 (517)
T ss_dssp HHHHHHHS-CCSEEEESSCCCC---------CTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEE
T ss_pred HHHHHHHC-CcceEEECCCCCC---------CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 577777 5999999985421 22344 455678888899999998877653
No 7
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=96.88 E-value=0.35 Score=51.42 Aligned_cols=321 Identities=15% Similarity=0.089 Sum_probs=181.3
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--cCCCce
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ--KSAETS 150 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q--~~~~~~ 150 (486)
..+-.+..+.+-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|.... +...+.
T Consensus 85 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~ 147 (521)
T 4e4g_A 85 PQRRARVFMKFVQLLNDNMNELAEMLSREHGKT-----------------IDDAKGDIVRGLEVCEFVIGIPHLQKSEFT 147 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC-----------------HHHHHHHHHHHHHHHHHHHTHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 344455667777777777776555555554421 0111223566667776665321 111222
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHHHcCCcc
Q 011411 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH 226 (486)
Q Consensus 151 ~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~l~Gv~e 226 (486)
....+|...-.++.|+.-|++..|.- +|+ ...+.-.+||-.||+.=| +-|.. ..|. +......+|+.+
T Consensus 148 ~~~~~~~~~~~~~~P~GVV~~I~PwN-~P~-~~~~~~~a~ALaaGN~VV--lKpse----~tp~t~~~l~~l~~eaGlP~ 219 (521)
T 4e4g_A 148 EGAGPGIDMYSIRQPVGIGAGITPFN-FPG-MIPMWMFAPAIACGNAFI--LKPSE----RDPSVPIRLAELMIEAGLPA 219 (521)
T ss_dssp EEEETTEEEEEEEEECCEEEEECCSS-CTT-HHHHHHHHHHHHTTCEEE--EECCT----TSTHHHHHHHHHHHHTTCCT
T ss_pred ccCCCCcceeEEEcCCcEEEEECCCc-chH-HHHHHHHHHHHHcCCEEE--EECCC----cchHHHHHHHHHHHHhCCCc
Confidence 22345767778899999999999963 332 234456789999997543 44432 2332 223445666642
Q ss_pred -hhh--cchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011411 227 -ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (486)
Q Consensus 227 -Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~ 297 (486)
++. -|+.....+|. .-|.||+|.=-|..=| ++|+.+. .|-.. +-|-|= +|-|++||.+.
T Consensus 220 gvv~vv~g~~~~~~~L~----~~p~vd~I~FTGS~~vG~~i~~~aa~~lk-----pv~lE-LGGk~p--~IV~~dADl~~ 287 (521)
T 4e4g_A 220 GILNVVNGDKGAVDAIL----THPDIAAVSFVGSTPIARYVYGTAAMNGK-----RAQCF-GGAKNH--MIIMPDADLDQ 287 (521)
T ss_dssp TSEEECCCCHHHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCEE--EEECTTSCHHH
T ss_pred CeEEEEeCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHhhcCC-----Ceeec-CCCCCe--EEEcCCCCHHH
Confidence 222 25555557775 3588999986665433 2232211 01111 223333 44566799998
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHhC
Q 011411 298 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH 351 (486)
Q Consensus 298 vAaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~~ 351 (486)
.|..++.-+ =.--.|...++....++. ++..+.+.+.++.+.- ...++.+.+.
T Consensus 288 Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 366 (521)
T 4e4g_A 288 AANALIGAGYGSAGERCMAISVAVPVGEETA-NRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQ 366 (521)
T ss_dssp HHHHHHHHHHGGGGCCTTSEEEEEEBSHHHH-HHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccCeEEEEeCchHH-HHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHC
Confidence 777665322 222345555555554354 7777777777666531 1222222211
Q ss_pred ------------------------------------------C---eEEEeCCHHHHHHHhhhhccccc--eecccChH-
Q 011411 352 ------------------------------------------S---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE- 383 (486)
Q Consensus 352 ------------------------------------------g---~iivv~~l~eai~~aN~~APEHL--el~~~~p~- 383 (486)
| .|+.++|+|||++++|.. +-.| .|.++|..
T Consensus 367 Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~gLaa~v~t~d~~~ 445 (521)
T 4e4g_A 367 GAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKH-EYGNGVAIYTRDGDA 445 (521)
T ss_dssp TCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHS-SEESEEEEECSBHHH
T ss_pred CCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcC-CCCeEEEEECCCHHH
Confidence 1 123368999999999984 4444 45677764
Q ss_pred --HHHhhccccceeccCCCCCccccccccCCCCCCCC-----CCcc--ccccCCcccccceeeeEEE
Q 011411 384 --KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYA--RMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 384 --~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~A--R~~SgLsV~dFlK~~s~~~ 441 (486)
.+..++ .+|.|++..++... +..+|= +|+. |..|.-+++.|+..-++..
T Consensus 446 a~~~~~~l-~aG~V~vN~~~~~~--------~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~ 503 (521)
T 4e4g_A 446 ARDFASRI-NIGMVGVNVPIPVP--------LAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS 503 (521)
T ss_dssp HHHHHHHC-CCSEEEESCSSCCC--------CTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHhC-CeeeEEECCCCCCC--------CCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEE
Confidence 566676 59999999765321 233554 4455 5566678889988777654
No 8
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=96.76 E-value=0.28 Score=51.28 Aligned_cols=287 Identities=15% Similarity=0.155 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHh--ccCCCc-eEEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCC
Q 011411 130 FDVAYNNIYAFHLA--QKSAET-SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPP 205 (486)
Q Consensus 130 i~~A~~nI~~Fh~~--Q~~~~~-~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP 205 (486)
++.+++.++.|... ++.+.. .....++....+++.|+.-||+..|. -|| ...+.-.+||-.||+.=|+=.+|-
T Consensus 88 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---NfP~~~~~~~~~~ALaaGN~VVlKps~~ 164 (474)
T 4h7n_A 88 IDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPW---NFPLTLSMIDTIPALLAGCAVVVKPSEI 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECS---SSHHHHHHTTHHHHHHHTCEEEEEECTT
T ss_pred HHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCC---CcHHHHHhcccCcchhcCCceeeccccc
Confidence 55566666665431 221222 22234677778889999999999996 367 445556789999998655443331
Q ss_pred CCCCCCCHHHHHHHHHcCCc-chh--hcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccc
Q 011411 206 SQDGSICKEVLYCAKKAGVT-HIL--KAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISI 276 (486)
Q Consensus 206 ~~~G~i~p~iLaAA~l~Gv~-eIy--~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgI 276 (486)
.+ ...-.++.++..+|.- .++ .-||.....+|. +.||+|.=-|..-| .+|+++.- |..
T Consensus 165 tp--~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~------~~v~~v~FTGS~~~G~~i~~~aa~~~~~-----v~l 231 (474)
T 4h7n_A 165 AP--RFVAPLLMALNTVPELRDVLIFVEGGGETGANLI------NYVDFVCFTGSVATGREVAETAARRFIP-----AYL 231 (474)
T ss_dssp SC--TTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHH------TTCSEEEEESCHHHHHHHHHHHHHHTCC-----EEE
T ss_pred Cc--hHHHHHHhhhhhhcccccceeeccccchhhhhhh------hccceEEeccccchhhhhhhhhhccccc-----ccc
Confidence 11 1112233344445431 222 246666666665 45888865555333 33444220 111
Q ss_pred cCCCCCcEEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC------------
Q 011411 277 DMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP------------ 340 (486)
Q Consensus 277 D~~AGPSEvlIIAD~sAnp~~vAaDLLaQAEH----dp~a~avLvT~s~~la~~~V~~~i~~ql~~l~------------ 340 (486)
. +-|=+ -+|-+++||.+..|..++.-+=. --.+...++.... .. ++..+.+.+.++.+.
T Consensus 232 E-lGGk~--p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~g 306 (474)
T 4h7n_A 232 E-LGGKD--PAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAES-KF-EEFYHQLIAKAHRLQLAYPLVEDGAIG 306 (474)
T ss_dssp E-CCCCE--EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGG-GH-HHHHHHHHHHHHHCCBCCSSGGGCSBC
T ss_pred c-CCCcC--ccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHH-HH-HHHHHHHHHHhhccccCCCcccccccC
Confidence 1 12322 24456779999888777543221 1223333433332 32 444444444333321
Q ss_pred ---c---H----HHHHHHHhC---------------------------------------C---eEEEeCCHHHHHHHhh
Q 011411 341 ---R---G----EFASKALGH---------------------------------------S---FMVFARDMLEGISFSN 368 (486)
Q Consensus 341 ---r---~----~ia~~sl~~---------------------------------------g---~iivv~~l~eai~~aN 368 (486)
. . ..+..+.+. | .|+.++|+|||++++|
T Consensus 307 pli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 386 (474)
T 4h7n_A 307 PIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLAN 386 (474)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHH
Confidence 0 0 112222211 2 3566899999999999
Q ss_pred hhc-cccceecccChH---HHHhhccccceeccCCCCCccccccccCCCCCCCCCCcc-ccccCCcccccceeeeEE
Q 011411 369 LYA-PEHLIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYA-RMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 369 ~~A-PEHLel~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G~A-R~~SgLsV~dFlK~~s~~ 440 (486)
.-- +--..|.++|.. .+..+++ +|.|++..++..++- -.||--=.|.+|.. |..|.-+++.|++.-++.
T Consensus 387 ~~~~GL~a~v~t~d~~~a~~~a~~l~-aG~v~iN~~~~~~~~--~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~ 460 (474)
T 4h7n_A 387 DTIYGLSAAVFAGSEDEALKVARQLN-AGAISINDAALTAMM--HEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFL 460 (474)
T ss_dssp CSSCCSEEEEECSSHHHHHHHHTTSC-CSEEEESSSCGGGTC--CCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEE
T ss_pred cCCCCCeEEEEeCCHHHHHHHHHhCC-eeEEEECCCCccCCc--CCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEE
Confidence 731 233567788875 4566664 899999975432110 11222233444543 666677889999887764
No 9
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=96.76 E-value=0.44 Score=50.16 Aligned_cols=327 Identities=16% Similarity=0.104 Sum_probs=179.2
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc-eE
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET-SV 151 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~-~~ 151 (486)
..+-.+..+.+-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|.+.-..-.. ..
T Consensus 71 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~ 133 (497)
T 3k2w_A 71 ARTRQNMLRTFANKIRENKHILAPMLVAEQGKL-----------------LSVAEMEVDVTATFIDYGCDNALTIEGDIL 133 (497)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHTTTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 344455566666777777665444444444320 112223366677777766543221111 11
Q ss_pred Ee-cCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc--
Q 011411 152 EN-MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-- 226 (486)
Q Consensus 152 ~~-~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e-- 226 (486)
.. .+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+.=| +-|.. .-.... .+......+|+..
T Consensus 134 ~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~-~tp~t~~~l~~ll~~aGlP~gv 207 (497)
T 3k2w_A 134 PSDNQDEKIYIHKVPRGVVVGITAW---NFPLALAGRKIGPALITGNTMV--LKPTQ-ETPLATTELGRIAKEAGLPDGV 207 (497)
T ss_dssp ECSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCS-SSCHHHHHHHHHHHHTTCCTTS
T ss_pred ccCCCCcceeEEEcCCceEEEECCC---ccHHHHHHHHHHHHHHcCCEEE--EECCC-CChHHHHHHHHHHHHhCcCcCe
Confidence 11 3566777889999999999996 477 555577889999997544 34432 111111 2223445666542
Q ss_pred --hhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHH-HhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHhhh
Q 011411 227 --ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 303 (486)
Q Consensus 227 --Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr-~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~vAaDLL 303 (486)
+..-.|...-.+|. .-|.||+|.=-|..=|-.+=. ..+..--.|-.. +-|-+= +|-|++||.+..|-.++
T Consensus 208 v~vv~g~~~~~g~~L~----~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lE-lGGk~p--~iV~~dADl~~Aa~~i~ 280 (497)
T 3k2w_A 208 LNVINGTGSVVGQTLC----ESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLE-LGGKAP--MVVMDDADLDKAAEDAL 280 (497)
T ss_dssp EEECCSCTTTHHHHHH----HCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEE-CCCCEE--EEECTTCCHHHHHHHHH
T ss_pred EEEEeCCchHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEE-cCCCCc--eEEcCCCCHHHHHHHHH
Confidence 22222554445555 358899998777643321100 000000001111 124333 44566799998777765
Q ss_pred hccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHH---------
Q 011411 304 SQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA--------- 348 (486)
Q Consensus 304 aQAE----Hdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~s--------- 348 (486)
.-+= .--.|...++.... .. +++.+.+.+.++.+.- ...++.+
T Consensus 281 ~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~ 358 (497)
T 3k2w_A 281 WGRFANCGQVCTCVERLYVHAS-VY-DEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVAT 358 (497)
T ss_dssp HHHHGGGGCSTTSEEEEEEETT-TH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEE
T ss_pred HHHHhCCCCCCcCCcEEEEeHH-HH-HHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 3221 12234444444432 43 6777766666655420 0111111
Q ss_pred ------------------------------Hh---CC---eEEEeCCHHHHHHHhhhhccc-cceecccChH---HHHhh
Q 011411 349 ------------------------------LG---HS---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE---KWESI 388 (486)
Q Consensus 349 ------------------------------l~---~g---~iivv~~l~eai~~aN~~APE-HLel~~~~p~---~~l~~ 388 (486)
+. .| .|+.++|+|||++++|..--= -..|.++|.. .++.+
T Consensus 359 gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 438 (497)
T 3k2w_A 359 GGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISD 438 (497)
T ss_dssp CCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHH
T ss_pred cCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHh
Confidence 11 13 346689999999999985322 2456677764 56677
Q ss_pred ccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEEE
Q 011411 389 IENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 389 I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
+ .+|.|++..++.. +.-+|-+ |..|..|.-+++.|+..-++..
T Consensus 439 l-~aG~v~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~ 486 (497)
T 3k2w_A 439 L-EVGEVYINRGMGE---------QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYI 486 (497)
T ss_dssp C-CSSEEEESCCSCC---------CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEE
T ss_pred C-CeeEEEEcCCCCC---------CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEE
Confidence 6 4999999976542 1345544 4567777778889987776554
No 10
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=96.74 E-value=0.37 Score=50.42 Aligned_cols=319 Identities=13% Similarity=0.093 Sum_probs=173.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 150 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~-~~~ 150 (486)
...+-.+..+.+.+.++++.|+=..-.++..-+- + .+.+.-+..+++.++.|.+...+- ...
T Consensus 64 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~~a~~ev~~~~~~~~~~a~~~~~~~~~~ 126 (485)
T 4dng_A 64 TTEDRKAVLQKARGYLHENRDDIIMMIARETGGT----------------I-IKSTIELEQTIAILDEAMTYTGELGGVK 126 (485)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHHHGGGCSCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4445566677777888888776655555554320 0 122223666777777665543221 111
Q ss_pred E--EecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHH-----HHHHHHHc
Q 011411 151 V--ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-----VLYCAKKA 222 (486)
Q Consensus 151 ~--~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~-----iLaAA~l~ 222 (486)
. ...+|...-.++.|+.-|++..|. -|| ...+...+||-.||+.=| +-|.. ..|. +..+...+
T Consensus 127 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~----~tp~~~~~~l~~~l~~a 197 (485)
T 4dng_A 127 EVPSDIEGKTNKIYRLPLGVISSISPF---NFPMNLSMRSIAPAIALGNSVV--HKPDI----QTAISGGTIIAKAFEHA 197 (485)
T ss_dssp CCCCSSTTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCG----GGHHHHTHHHHHHHHHT
T ss_pred ccccCCCCceEEEEEecceEEEEECCC---ccHHHHHHHHHHHHHHcCCEEE--EECCC----cChHHHHHHHHHHHHHh
Confidence 1 113567778889999999999996 355 445567889999997544 34432 3343 22445667
Q ss_pred CCc----chhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCC
Q 011411 223 GVT----HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIY 292 (486)
Q Consensus 223 Gv~----eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~s 292 (486)
|+. .+..-+|...-.+|. .-|.||+|.=-|..=| .+|+.+- . |-.. +-|-+= +|-|++
T Consensus 198 GlP~gvv~vv~g~~~~~~~~L~----~~p~v~~v~fTGS~~~g~~i~~~aa~~~~-~----v~lE-lGGk~p--~iV~~d 265 (485)
T 4dng_A 198 GLPAGVLNVMLTDVKEIGDGML----TNPIPRLISFTGSTAVGRHIGEIAGRAFK-R----MALE-LGGNNP--FAVLSD 265 (485)
T ss_dssp TCCTTSEEECCCCHHHHTTHHH----HCSSCSEEEEEECHHHHHHHHHHHHHHTC-E----EEEE-ECCCEE--EEECTT
T ss_pred CcCCCeEEEEeCCChhHHHHHH----hCCCCCEEEEECCcHHHHHHHHHHhhhcc-c----hhhh-cCCCCc--eEEcCC
Confidence 654 222222443444443 2478999975555332 2232211 0 1111 114443 444677
Q ss_pred CCHHHHHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCC---------------c-------HHHHH
Q 011411 293 ASPVHIAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFAS 346 (486)
Q Consensus 293 Anp~~vAaDLLaQAEHdp----~a~avLvT~s~~la~~~V~~~i~~ql~~l~---------------r-------~~ia~ 346 (486)
||.+..|-.++.-+=... .|...++.. +++. +++.+.+.+.++.+. . .+.++
T Consensus 266 ADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~ 343 (485)
T 4dng_A 266 ADVDRAVDAAIFGKFIHQGQICMIINRIIVH-QDVY-DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIE 343 (485)
T ss_dssp SCHHHHHHHHHHHHTTCC----CCEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCccccCCEEEEe-HHHH-HHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHH
Confidence 999987777665442222 233334443 3453 777777766665541 0 12233
Q ss_pred HHHhC-----------------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---
Q 011411 347 KALGH-----------------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE--- 383 (486)
Q Consensus 347 ~sl~~-----------------------------------g---~iivv~~l~eai~~aN~~APEH--Lel~~~~p~--- 383 (486)
.+.+. | .|+.++|+|||++++|.. +-. ..|.++|..
T Consensus 344 ~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~-~~gL~a~v~t~d~~~a~ 422 (485)
T 4dng_A 344 QAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDT-EYGLSSAVFTSDLEKGE 422 (485)
T ss_dssp HHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCS-SCCSEEEEECSCHHHHH
T ss_pred HHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCC-CCCceEEEECCCHHHHH
Confidence 33211 2 345689999999999985 333 346677864
Q ss_pred HHHhhccccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEE
Q 011411 384 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 384 ~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~SgLsV~dFlK~~s~~ 440 (486)
.+..++ .+|.|++..++... +.-+| .+|+.|+.+.-+++.|++.-++.
T Consensus 423 ~~~~~l-~~G~v~vN~~~~~~--------~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 423 KFALQI-DSGMTHVNDQSVND--------SPNIAFGGNKASGVGRFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHHTTS-CSSEEEESCC------------------------------CHHHHHHHEEEEEEE
T ss_pred HHHHhc-CcceEEECCCCCCC--------CCCCCcCCcCCCCCCccchHHHHHHhhceEEEE
Confidence 466666 58999999865321 12233 55677888778888998776654
No 11
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=96.65 E-value=0.85 Score=47.89 Aligned_cols=323 Identities=16% Similarity=0.122 Sum_probs=177.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCce
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETS 150 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~-~~~~ 150 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+- + .+.+.-+..+++.++.|.+.-.. ....
T Consensus 68 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~~~~~a~~~~~~~g~~ 130 (487)
T 2w8n_A 68 SAKERSSLLRKWYNLMIQNKDDLARIITAESGKP----------------L-KEAHGEILYSAFFLEWFSEEARRVYGDI 130 (487)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHHHGGGCCCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 4445566677777778888776555555544321 0 11112266777777766543221 1111
Q ss_pred EEe-cCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-h
Q 011411 151 VEN-MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 227 (486)
Q Consensus 151 ~~~-~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e-I 227 (486)
... .+|...-.++.|+.-|++..|.- +|+ ...+...+||-.||+.=| +=|.. .-.... .+......+|... +
T Consensus 131 ~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~-~~~~~~~~~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~~aGlP~gv 205 (487)
T 2w8n_A 131 IHTPAKDRRALVLKQPIGVAAVITPWN-FPS-AMITRKVGAALAAGCTVV--VKPAE-DTPFSALALAELASQAGIPSGV 205 (487)
T ss_dssp ECCSCTTCEEEEEEEECCEEEEECCSS-STT-HHHHHHHHHHHHHTCEEE--EECCT-TCCHHHHHHHHHHHHHTCCTTS
T ss_pred cccCCCCceeEEEEecceEEEEECCCc-chH-HHHHHHHHHHHHcCCEEE--EECCC-cchHHHHHHHHHHHHhCCCCCe
Confidence 111 24656667889999999999963 333 344567889999998433 33432 111222 2334455667653 2
Q ss_pred hh-c----c-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCH
Q 011411 228 LK-A----G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASP 295 (486)
Q Consensus 228 y~-v----G-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp 295 (486)
+. + | |...-.+|. +-|.||+|.=-|..=| ++|+.+. .|-.. +-|-| -+|-|++||.
T Consensus 206 v~vv~~~~g~~~~~~~~L~----~~~~v~~V~fTGS~~~g~~i~~~aa~~~~-----pv~lE-lGGk~--p~iV~~dADl 273 (487)
T 2w8n_A 206 YNVIPCSRKNAKEVGEAIC----TDPLVSKISFTGSTTTGKILLHHAANSVK-----RVSME-LGGLA--PFIVFDSANV 273 (487)
T ss_dssp EEECCCCHHHHHHHHHHHT----TCTTEEEEEEEECHHHHHHHHHHHHTTTC-----EEEEE-ECEEE--EEEECTTSCH
T ss_pred EEEEecCCCCcHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHHhccCC-----cEEEe-cCCCC--eEEECCCCCH
Confidence 22 1 5 555555554 3588999984444322 2221111 02111 12333 3555677999
Q ss_pred HHHHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhc-CC---------------c-------HHHHHHH
Q 011411 296 VHIAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQS-LP---------------R-------GEFASKA 348 (486)
Q Consensus 296 ~~vAaDLLaQAEHdp----~a~avLvT~s~~la~~~V~~~i~~ql~~-l~---------------r-------~~ia~~s 348 (486)
+..|-.++.-+=... .|...++... +.. ++..+.+.+.++. +. . ...++.+
T Consensus 274 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a 351 (487)
T 2w8n_A 274 DQAVAGAMASKFRNTGQTCVCSNQFLVQR-GIH-DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDA 351 (487)
T ss_dssp HHHHHHHHHHHTCCCSCCCSEEEEEEEEH-HHH-HHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCccccCCEEEEcc-cHH-HHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHH
Confidence 988777765432222 2333333322 232 5555555555544 31 0 0112222
Q ss_pred Hh--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---
Q 011411 349 LG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE--- 383 (486)
Q Consensus 349 l~--------------------------------------~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~--- 383 (486)
.+ .| .|+.++|+|||++++|..- +--..|.++|..
T Consensus 352 ~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~ 431 (487)
T 2w8n_A 352 VSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIW 431 (487)
T ss_dssp HTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHH
T ss_pred HHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHH
Confidence 11 01 2344789999999999842 234566788875
Q ss_pred HHHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011411 384 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 384 ~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgLsV~dFlK~~s~~ 440 (486)
.++.++ .+|.|++..++.. +..+|-+ |..|+.|.-+++.|+..-++.
T Consensus 432 ~~~~~l-~aG~v~vN~~~~~---------~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~ 483 (487)
T 2w8n_A 432 RVAEQL-EVGMVGVNEGLIS---------SVECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483 (487)
T ss_dssp HHHHHS-CSSEEEESCSCCC---------CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEE
T ss_pred HHHHhC-CeeeEEEcCCCCC---------CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEE
Confidence 466677 5999999975532 1125544 466787888899998877764
No 12
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=96.64 E-value=0.18 Score=53.09 Aligned_cols=321 Identities=17% Similarity=0.138 Sum_probs=180.4
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~ 151 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+-. .-+..|+ ....+.++..+++++++...+.+
T Consensus 46 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~ea~~ev------~~~~~~~~~~a~~~~~~~~~~~~----- 110 (484)
T 3ros_A 46 EPASRAEILHDIANALKEHEDELAKMMTLEMGKLL----SESKEEV------ELCVSICNYYADHGPEMLKPTKL----- 110 (484)
T ss_dssp CTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH----HHHHHHH------HHHHHHHHHHHHHHHHHTSCEEE-----
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHHHHH------HHHHHHHHHHHHHHHHhcCCeec-----
Confidence 44455566777777788888776665666554310 0000010 12233444444554444332222
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHHHcCCcc
Q 011411 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH 226 (486)
Q Consensus 152 ~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~l~Gv~e 226 (486)
..+|...-.++.|+.-|++..|.- || ...+.-.+||-.||+.=|+= |.. ..|. +......+|+.+
T Consensus 111 -~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGN~VVlK--ps~----~tp~t~~~l~~l~~~aGlP~ 180 (484)
T 3ros_A 111 -NSDLGNAYYLKQSTGVIMACEPWN---FPLYQVIRVFAPNFIVGNPILLK--HAH----NVPGSAALTAKIIKRAGAPE 180 (484)
T ss_dssp -CCTTSEEEEEEECCCEEEEECCSS---STTHHHHHHHHHHHHHTCCEEEE--CCT----TCHHHHHHHHHHHHHHTCCT
T ss_pred -cCCCceeEEEecCCceEEEECCCc---hHHHHHHHHHHHHHHcCCEEEEE--CCC----CChHHHHHHHHHHHHhCcCc
Confidence 124556778899999999999963 44 34456678999999865543 432 3442 223445666542
Q ss_pred -hhh--cchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011411 227 -ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (486)
Q Consensus 227 -Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~ 297 (486)
++. .|+...+++|. .-|.||+|.=-|..=| ++|+.+- .|-.. +-|-|= +|-|++||.+.
T Consensus 181 gvv~vv~g~~~~~~~L~----~~p~vd~I~fTGS~~~G~~i~~~aa~~lk-----~v~lE-LGGk~p--~iV~~dADl~~ 248 (484)
T 3ros_A 181 GSLINLYPSYDQLADII----ADPRIQGVALTGSERGGSAVAEAAGKNLK-----KSTME-LGGNDA--FIVLDDADPQV 248 (484)
T ss_dssp TSEEEECCCHHHHHHHH----TSTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCCE--EEECTTCCHHH
T ss_pred CeEEEEeCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHhccCC-----ceEee-cCCCCc--ceeCCCCCHHH
Confidence 222 24344445554 3488999976665432 2332211 01111 124443 44466799998
Q ss_pred HHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHhC
Q 011411 298 IAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH 351 (486)
Q Consensus 298 vAaDLLaQAEHd----p~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~~ 351 (486)
.|-.++.-+=.. -.|...++... +.. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 249 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 326 (484)
T 3ros_A 249 LRNVLNDARTYNDGQVCTSSKRIIVEK-SRY-DEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDA 326 (484)
T ss_dssp HHHHHTTTTTGGGGCCTTSCCEEEEEG-GGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCccCCceEEEcH-HHH-HHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHc
Confidence 887776533222 22333333333 343 7777777776665420 1222222211
Q ss_pred --------------------------------------C---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHH
Q 011411 352 --------------------------------------S---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWE 386 (486)
Q Consensus 352 --------------------------------------g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~l 386 (486)
| .|+.++|+|||++++|..- +--..|.++|.. .+.
T Consensus 327 Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 406 (484)
T 3ros_A 327 GAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVS 406 (484)
T ss_dssp TCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHH
T ss_pred CCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 2 2455789999999999853 223456777864 566
Q ss_pred hhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEEE
Q 011411 387 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 387 ~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
.++ .+|.|++..++.. +.-+|-+ |..|..|..+++.|+..-++..
T Consensus 407 ~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 456 (484)
T 3ros_A 407 AQI-ETGMTVINGRWIT---------SGELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456 (484)
T ss_dssp HHS-CSSCCEETSCCCC---------CTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEE
T ss_pred HhC-ccceEEECCCCCC---------CCCCCcCCcCcccCCcCchHHHHHHhheeEEEEE
Confidence 777 5899999975321 2335544 4567777788999998877654
No 13
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=96.60 E-value=0.87 Score=47.40 Aligned_cols=330 Identities=15% Similarity=0.143 Sum_probs=189.9
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~ 151 (486)
+.++..+.++.+-+.++++-|+=..-.++....- .......-+..+++++..+.+..+... .+
T Consensus 32 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~e~~~~~~~~~~~~~~~~~~~~~~~g-~~ 94 (464)
T 3k9d_A 32 SQQQIDTIVKAIADAGYGAREKLAKMAHEETGFG----------------IWQDKVIKNVFASKHVYNYIKDMKTIG-ML 94 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCS----------------CHHHHHHHHHHHHHHHHHHHTTCCCSE-EE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcC----------------HHHHHHHHHHHHHHHHHHhhhcccccc-ee
Confidence 3445556666666667777665444444443321 001111124566677777665443322 22
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCCch-HhhhcccceeecCCCeEEEEcCCCCCCCCCHHH--------HHHHHHc
Q 011411 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEV--------LYCAKKA 222 (486)
Q Consensus 152 ~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i--------LaAA~l~ 222 (486)
...+|...-.++.|+.-|++..|. -||- +++..++||-.||+. |++-|.. ..|.+ ..++..+
T Consensus 95 ~~~~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~--VVlKps~----~ap~t~~~l~~ll~~~~~~a 165 (464)
T 3k9d_A 95 KEDNEKKVMEVAVPLGVVAGLIPS---TNPTSTVIYKTLISIKAGNS--IVFSPHP----NALKAILETVRIISEAAEKA 165 (464)
T ss_dssp EEETTTTEEEEEEECCEEEEEECS---SSHHHHHHHHHHHHHHTTCE--EEEEECG----GGHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCceeEEEEecceEEEEECCC---cChHHHHHHHHHHHHHhCCe--EEEECCc----chHHHHHHHHHHHHHHHHHh
Confidence 223455566788999999999996 3664 446788999999964 3344432 23332 1345667
Q ss_pred CCcc-hhh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHh-cCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011411 223 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL-QNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (486)
Q Consensus 223 Gv~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v-~~~~~~VgID~~AGPSEvlIIAD~sAnp~~ 297 (486)
|+.+ ++. -| |.+...+|.= -|.||+|.=-|..-|. |... ... .| + -.|+.---+|-|++||.+.
T Consensus 166 G~P~gvv~vv~g~~~~~~~~L~~----~~~vd~I~fTGs~~v~--~~a~~~~k--pv-l--elG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 166 GCPKGAISCMTVPTIQGTDQLMK----HKDTAVILATGGSAMV--KAAYSSGT--PA-I--GVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp TCCTTSEEECSSCCHHHHHHHHH----CTTEEEEEECSCHHHH--HHHTTSSS--CE-E--EBCCCCCEEEECTTSCHHH
T ss_pred CCCCCeEEEEeCCCHHHHHHHHh----CCCCCEEEEeCChHHH--HHHHhcCC--cE-E--eeCCCCCeEEECCCCCHHH
Confidence 7764 332 13 6666666652 4789999877776543 2222 111 13 3 3444445567788999999
Q ss_pred HHHhhhhccCcCC----CC-ceEEEecCchhhHHHHHHHHHHHHhcC---------------C-----------cHHHHH
Q 011411 298 IAADLLSQAEHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSL---------------P-----------RGEFAS 346 (486)
Q Consensus 298 vAaDLLaQAEHdp----~a-~avLvT~s~~la~~~V~~~i~~ql~~l---------------~-----------r~~ia~ 346 (486)
.|-+++.-+=.+. .| +.+||-. ++. +++.+++.++...+ + ..+-+.
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~--~i~-d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~ 311 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVER--VNK-EAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIA 311 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEH--HHH-HHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHH
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeH--HHH-HHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHH
Confidence 8888775443333 12 3455533 353 66666666543110 0 011111
Q ss_pred HHHh----C-----------------------C---eEEEeCCHHHHH----HHhhhhcc-ccceecccChH---HHHhh
Q 011411 347 KALG----H-----------------------S---FMVFARDMLEGI----SFSNLYAP-EHLIVNVKDAE---KWESI 388 (486)
Q Consensus 347 ~sl~----~-----------------------g---~iivv~~l~eai----~~aN~~AP-EHLel~~~~p~---~~l~~ 388 (486)
+-++ . | .|+.++|+|||+ +++|..-- --..|.++|.. .+..+
T Consensus 312 ~~~~~a~~~ga~vl~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~ 391 (464)
T 3k9d_A 312 NLAGLTVPADARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALK 391 (464)
T ss_dssp HHTTCCCCTTCCEEEEECCCCSTTCGGGSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHH
T ss_pred HHhhhhhcCCCEEEEcCCCCCCCCCcccccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHh
Confidence 1111 1 2 245689999997 68886432 33556788864 46666
Q ss_pred ccccceeccCCCCC-ccccccccCCCCCCCCC----CccccccCCcccccceeeeEEEeC
Q 011411 389 IENAGSVFLGEWTP-ESVGDYASGTNHVLPTY----GYARMYGGVSLDSFLKYMTVQSLT 443 (486)
Q Consensus 389 I~nAGsIFlG~~tp-~a~GDY~aGpNHvLPT~----G~AR~~SgLsV~dFlK~~s~~~~s 443 (486)
++ +|.|++..++. -..|+ ..+.+..||-+ |..++++.+++.+|+..-++.+-.
T Consensus 392 l~-~G~v~vN~~~~~~~~g~-~~~~~~~~~~G~G~~G~g~~~~~~~~~~~~~~k~v~~~~ 449 (464)
T 3k9d_A 392 KP-VSRLLVNTPGALGGIGA-TTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGV 449 (464)
T ss_dssp SS-EEEEEESSCHHHHHTTS-SSSSCCCSCBBCTGGGTCSCCSBCCGGGSEEEEEEEECC
T ss_pred CC-EeEEEEECCcccccccc-CCCCCccccccCcCCCCCcCCCCCCHHHheEEEEEEecC
Confidence 65 89999997654 23453 23344455554 666778888999999877776643
No 14
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=96.56 E-value=0.23 Score=52.08 Aligned_cols=338 Identities=12% Similarity=0.092 Sum_probs=171.5
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc
Q 011411 71 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVEN-VSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET 149 (486)
Q Consensus 71 ~~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs-~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~ 149 (486)
....+-.+..+.+-+.++++.|+=..-.++..-+..-..+.-+ ..|+.. -..+.++.++++++++.+...+...
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~-----~~~~~~~~~a~~~~~~~~~~~~~g~ 107 (468)
T 1vlu_A 33 ISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDL-----FKGDKFEVMLQGIKDVAELEDPVGK 107 (468)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCT-----TSTTHHHHHHHHHHHHHHSCCSSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhh-----hhHHHHHHHHHHHHHHhhcCCCCCe
Confidence 3444555667777777777777655444444422100000000 011111 0223467788888888765443221
Q ss_pred eEE---ecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHH---HHHH-H---
Q 011411 150 SVE---NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE---VLYC-A--- 219 (486)
Q Consensus 150 ~~~---~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~---iLaA-A--- 219 (486)
... ..+|...-.++.|+.-|++..|.- |...++-.+||-.||+.=| +-|.. ..|. .|+- .
T Consensus 108 ~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN----P~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~a 177 (468)
T 1vlu_A 108 VKMARELDDGLTLYQVTAPVGVLLVIFESR----PEVIANITALSIKSGNAAI--LKGGK----ESVNTFREMAKIVNDT 177 (468)
T ss_dssp EEEEEEEETTEEEEEEEEECCEEEEEESSC----THHHHHHHHHHHHHTCEEE--EECCG----GGHHHHHHHHHHHHHH
T ss_pred ecccccCCCCceeEEEecCcceEEEEeccC----hHHHHHHHHHHHHcCCEEE--EEcCC----ccHHHHHHHHHHHHHH
Confidence 111 124666678899999999999953 5777888999999998544 34432 2332 2221 2
Q ss_pred -HH----cCCc----chhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEec
Q 011411 220 -KK----AGVT----HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIAD 290 (486)
Q Consensus 220 -~l----~Gv~----eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~~~VgID~~AGPSEvlIIAD 290 (486)
.. +|+. .+.. +|...-.+|. .-|.||+|.=-|..= ..|++.....-.|- =-+-|-+ -+|-|
T Consensus 178 L~e~~~~aGlP~gvv~vv~-~~~~~g~~L~----~~p~vd~I~fTGS~~--~g~~i~~~a~kpv~-lElGGk~--p~iV~ 247 (468)
T 1vlu_A 178 IAQFQSETGVPVGSVQLIE-TRQDVSDLLD----QDEYIDLVVPRGSNA--LVRKIKDTTKIPVL-GHADGIC--SIYLD 247 (468)
T ss_dssp HHHHHHHHCCCTTSEEECC-CC--CGGGGG----CTTTCCEEEEESCHH--HHHHHHHTCCSCBT-TBCSCCE--EEEEC
T ss_pred HHhhchhcCCCCCcEEEEC-CHHHHHHHHh----hCCCcCEEEEECCHH--HHHHHHHhcCCCEE-eecCCcc--ceEEC
Confidence 24 6654 3444 5543222232 348899996555532 22332211000011 1122433 35556
Q ss_pred CCCCHHHHHHhhhhccCcCCC---Cce-EEEecC-chhhHHHHHHHHHHHHh---cCCc-HHH-HHHH------------
Q 011411 291 IYASPVHIAADLLSQAEHGPD---SQV-VLVIVG-DGVDLDAIEQEISKQCQ---SLPR-GEF-ASKA------------ 348 (486)
Q Consensus 291 ~sAnp~~vAaDLLaQAEHdp~---a~a-vLvT~s-~~la~~~V~~~i~~ql~---~l~r-~~i-a~~s------------ 348 (486)
++||.+..|-.++.-+=.... |.. +||-.+ +++. +++.+++.+.-- .-|. ... ++.+
T Consensus 248 ~dADl~~Aa~~i~~~~~~n~G~C~a~~rvlV~~~id~f~-~~l~~~~~~~~v~~~Gdp~~~~~~i~~a~~~~~gG~g~~P 326 (468)
T 1vlu_A 248 EDADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWW-EVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQC 326 (468)
T ss_dssp TTCCHHHHHHHHHHTTCC----CCCCEEEEECTTSTTHH-HHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHHT
T ss_pred CCCCHHHHHHHHHHHhcCCCCcCCcCcEEEEECCHHHHH-HHHHHHHHhcCCeecCCHHHhcccccccceeeccCCCCCC
Confidence 679999887776654433332 222 444333 3453 666555544321 1111 122 2222
Q ss_pred ----------Hh---CC---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HHHhhccccceeccCCCCCccccc
Q 011411 349 ----------LG---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KWESIIENAGSVFLGEWTPESVGD 407 (486)
Q Consensus 349 ----------l~---~g---~iivv~~l~eai~~aN~~APEHL--el~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GD 407 (486)
+. .| .|+.++|+|||++++|.. |-.| .|.++|.. .+..++ .+|.|++..++....+=
T Consensus 327 tvlv~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~gL~a~v~t~d~~~a~~~~~~l-~aG~V~vN~~~~~~~~~ 404 (468)
T 1vlu_A 327 KTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTH-SSRHTDAIVTENKANAEKFMKGV-DSSGVYWNASTRFADGF 404 (468)
T ss_dssp TBC-------------CCCCEEEECCSHHHHHHHHTTS-CSSCEEEEECSCHHHHHHHHHHC-CCSEEEESSCGGGCC--
T ss_pred ceeeCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhC-CCCceEEEEeCCHHHHHHHHHhC-CeeEEEEcCCCCCCCCC
Confidence 11 13 567799999999999985 4444 45677764 456666 48999999765321000
Q ss_pred ccc-----CCCCCCCCCCccccccCCcccccceeeeEEE
Q 011411 408 YAS-----GTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 408 Y~a-----GpNHvLPT~G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
-+. |. -++|..|. +..+++.|+..-++..
T Consensus 405 pfG~Gg~~G~----~~SG~g~~-G~~gl~~f~~~K~v~~ 438 (468)
T 1vlu_A 405 RYGFGAEVGI----STSKIHAR-GPVGLDGLVSYQYQIR 438 (468)
T ss_dssp -------------------------CCSGGGEEEEEEEE
T ss_pred CCCCCCCcce----ecCCCCCC-cchHHHHhcceEEEEE
Confidence 011 22 23556677 8889999998888764
No 15
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=96.54 E-value=0.97 Score=47.25 Aligned_cols=320 Identities=19% Similarity=0.162 Sum_probs=177.6
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceEE
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSVE 152 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~-~~~~~~ 152 (486)
.+-.+..+.+.+.++++.|+=..-.++..-+- ..+.+.-+..+++.++.|...-.. ......
T Consensus 69 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~ 131 (481)
T 3jz4_A 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKP-----------------LAEAKGEISYAASFIEWFAEEGKRIYGDTIP 131 (481)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHGGGCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 34445566666777777666544444444321 112233466777778666543221 111111
Q ss_pred -ecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-hh
Q 011411 153 -NMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-IL 228 (486)
Q Consensus 153 -~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e-Iy 228 (486)
..+|...-.++.|+.-|++..|.- || ...+.-.+||-.||+.=| +-|.... .... .+......+|+.+ ++
T Consensus 132 ~~~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VV--lKps~~t-p~~~~~l~~l~~~aGlP~gvv 205 (481)
T 3jz4_A 132 GHQADKRLIVIKQPIGVTAAITPWN---FPAAMITRKAGPALAAGCTMV--LKPASQT-PFSALALAELAIRAGVPAGVF 205 (481)
T ss_dssp CSSTTEEEEEEEEECCEEEEECCSS---STTHHHHHHHHHHHHHTCEEE--EECCTTS-CHHHHHHHHHHHHHTCCTTTE
T ss_pred ccCCCceEEEEEcCccEEEEECCCc---chHHHHHHHHHHHHHcCCEEE--EECCCCC-cHHHHHHHHHHHHhCcCCCeE
Confidence 134666677889999999999963 44 344557789999997544 3443211 1111 2233455667642 33
Q ss_pred hc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHH
Q 011411 229 KA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 299 (486)
Q Consensus 229 ~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~vA 299 (486)
.+ | |...-.+|.- -|.||+|.=-|..=|- +|+.+. .|-.. +-|-+= +|-|++||.+..|
T Consensus 206 ~vv~g~~~~~g~~L~~----~p~v~~I~fTGS~~~g~~i~~~aa~~~~-----~v~lE-lGGk~p--~iV~~dADl~~Aa 273 (481)
T 3jz4_A 206 NVVTGSAGAVGNELTS----NPLVRKLSFTGSTEIGRQLMEQCAKDIK-----KVSLE-LGGNAP--FIVFDDADLDKAV 273 (481)
T ss_dssp EECCBCTHHHHHHHHH----CTTEEEEEEESCHHHHHHHHHHHTTTTC-----EEEEE-CCCCEE--EEECTTSCHHHHH
T ss_pred EEEeCCChHHHHHHHh----CCCcCEEEEECCHHHHHHHHHHHhhcCC-----ceEEe-cCCCCe--EEEcCCCCHHHHH
Confidence 22 3 5555556652 5889999866665332 221110 01111 124333 4456678998877
Q ss_pred HhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------c-------HHHHHHHHhC--
Q 011411 300 ADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH-- 351 (486)
Q Consensus 300 aDLLaQAE----Hdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~---------------r-------~~ia~~sl~~-- 351 (486)
-.++.-+= +--.|...++... +.. +++.+.+.+.++.+. . .+.++.+.+.
T Consensus 274 ~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga 351 (481)
T 3jz4_A 274 EGALASKFRNAGQTCVCANRLYVQD-GVY-DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGA 351 (481)
T ss_dssp HHHHHHHHGGGGCSTTSEEEEEEEG-GGH-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCcccCCcEEEEeH-HHH-HHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCC
Confidence 66654322 2223444444433 353 777777777777652 0 1222222211
Q ss_pred ------------------------------------C---eEEEeCCHHHHHHHhhhhccc-cceecccChH---HHHhh
Q 011411 352 ------------------------------------S---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE---KWESI 388 (486)
Q Consensus 352 ------------------------------------g---~iivv~~l~eai~~aN~~APE-HLel~~~~p~---~~l~~ 388 (486)
| .|+.++|+|||++++|..--= -..|.++|.. .+..+
T Consensus 352 ~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 431 (481)
T 3jz4_A 352 RVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEA 431 (481)
T ss_dssp EEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHH
T ss_pred EEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHh
Confidence 1 234578999999999984322 2346677765 46666
Q ss_pred ccccceeccCCCCCccccccccCCCCCCCCCCc-----cccccCCcccccceeeeEE
Q 011411 389 IENAGSVFLGEWTPESVGDYASGTNHVLPTYGY-----ARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 389 I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G~-----AR~~SgLsV~dFlK~~s~~ 440 (486)
++ +|.|++..++. .++-+|-+|. .|..+.-+++.|.+.-++.
T Consensus 432 l~-~G~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~ 478 (481)
T 3jz4_A 432 LE-YGIVGINTGII---------SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMC 478 (481)
T ss_dssp CC-CSEEEESCSCC---------CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred CC-eeeEEECCCCC---------CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEE
Confidence 64 99999997543 1345676654 5556666778887766553
No 16
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=96.49 E-value=0.77 Score=48.46 Aligned_cols=320 Identities=16% Similarity=0.100 Sum_probs=176.6
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce---
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS--- 150 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~--- 150 (486)
.+-.+..+.+-+.++++.|+=..-.++..-+- +......-+..+++.++.|.+. ..+ |.
T Consensus 82 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~ev~~~~~~~~~~a~~-~~~-~~g~~ 143 (500)
T 1o04_A 82 SHRGRLLNRLADLIERDRTYLAALETLDNGKP----------------YVISYLVDLDMVLKCLRYYAGW-ADK-YHGKT 143 (500)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHH-TTT-CCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----------------HHHHHHHHHHHHHHHHHHHHHH-HHH-hhCcc
Confidence 34455677777777777776555555544321 1111122255666667666542 221 21
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-h
Q 011411 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 227 (486)
Q Consensus 151 ~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e-I 227 (486)
+...+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+=|.. .-.... .+......+|..+ +
T Consensus 144 ~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~t~~~l~~l~~~aGlP~gv 217 (500)
T 1o04_A 144 IPIDGDFFSYTRHEPVGVCGQIIPW---NFPLLMQAWKLGPALATGNV--VVMKVAE-QTPLTALYVANLIKEAGFPPGV 217 (500)
T ss_dssp ECCSSSEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHHTCCTTS
T ss_pred eecCCCceEEEEEecCCcEEEECCC---CchHHHHHHHHHHHHHcCCE--EEEECCc-cChHHHHHHHHHHHHhCCCcCe
Confidence 1123455566788999999999996 477 4555678899999986 3444542 111111 2334455566542 2
Q ss_pred hh--cc-hHHHHHHHhhCCCCCCCceEEecCCcH------HHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011411 228 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQ------YVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (486)
Q Consensus 228 y~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~------yVt~A-Kr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~ 297 (486)
+. -| |...-.+|. .-|.||+|.=-|.. ..++| +.+. .|-.. +-|-|= +|-|++||.+.
T Consensus 218 v~vv~g~~~~~g~~L~----~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~-----pv~lE-LGGk~p--~iV~~dADl~~ 285 (500)
T 1o04_A 218 VNIVPGFGPTAGAAIA----SHEDVDKVAFTGSTEIGRVIQVAAGSSNLK-----RVTLE-LGGKSP--NIIMSDADMDW 285 (500)
T ss_dssp EEECCBCTTTHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHHTTCC-----EEEEE-CCCCEE--EEECTTSCHHH
T ss_pred EEEEecCcHHHHHHHH----hCCCcCEEEEECCHHHHHHHHHhhhhhcCc-----eEEEE-cCCcCe--EEECCCCCHHH
Confidence 22 24 655555554 25889999744432 23333 1110 01111 124443 44456689988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----c------------------HHHHHHHHh-
Q 011411 298 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALG- 350 (486)
Q Consensus 298 vAaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~----r------------------~~ia~~sl~- 350 (486)
.|-.++.-+ =.--.|...++... +.. +++.+.+.+.++.+. . ...++.+.+
T Consensus 286 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 363 (500)
T 1o04_A 286 AVEQAHFALFFNQGQCSCAGSRTFVQE-DIY-DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQE 363 (500)
T ss_dssp HHHHHHHHHHGGGGCCTTCEEEEEEEH-HHH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCCCCCCEEEEeh-hHH-HHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhC
Confidence 777765422 12233444444433 243 666666665554441 0 011111111
Q ss_pred -------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHH
Q 011411 351 -------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWE 386 (486)
Q Consensus 351 -------------------------------------~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~l 386 (486)
.| .|+.++|+|||++++|..- +--..|.++|.. .+.
T Consensus 364 Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 443 (500)
T 1o04_A 364 GAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLS 443 (500)
T ss_dssp TCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 12 3455789999999999852 233556677764 466
Q ss_pred hhccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011411 387 SIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 387 ~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
.++ .+|.|++..++.. + .-+|- +|..|+.+..+++.|+..-++..
T Consensus 444 ~~l-~aG~V~iN~~~~~-------~--~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~ 493 (500)
T 1o04_A 444 QAL-QAGTVWVNCYDVF-------G--AQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493 (500)
T ss_dssp HHC-CSSEEEESCSSCC-------C--TTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEE
T ss_pred HhC-CeeEEEECCCCCC-------C--CCCCCCCcCCCCCCccchHHHHHHhcceEEEEE
Confidence 776 4899999976431 1 12454 45667777788999998877653
No 17
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=96.47 E-value=0.93 Score=47.50 Aligned_cols=323 Identities=13% Similarity=0.131 Sum_probs=174.9
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCCc
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAET 149 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~--Q~~~~~ 149 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+- + .+.+.-+..+++.++.|... .+...+
T Consensus 63 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~-------------~~a~~ev~~~~~~~~~~a~~~~~~~g~~ 125 (486)
T 1t90_A 63 AVPRRARILFNFQQLLSQHKEELAHLITIENGKN----T-------------KEALGEVGRGIENVEFAAGAPSLMMGDS 125 (486)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCC----H-------------HHHHHHHHHHHHHHHHHTTHHHHHCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----H-------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 4445566677777777877776555555555321 0 01111245555666654321 111111
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-
Q 011411 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH- 226 (486)
Q Consensus 150 ~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e- 226 (486)
.....+|...-.++.|+.-|++..|. -|| ...+...+||-.||+.=|+= |.. .-.... .+......+|...
T Consensus 126 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~~aGlP~g 199 (486)
T 1t90_A 126 LASIATDVEAANYRYPIGVVGGIAPF---NFPMMVPCWMFPMAIALGNTFILK--PSE-RTPLLTEKLVELFEKAGLPKG 199 (486)
T ss_dssp EEEEETTEEEEEEEEECSEEEEECCS---SCTTHHHHHHHHHHHHTTCEEEEE--CCS-SSCHHHHHHHHHHHHTTCCTT
T ss_pred cccCCCCceeEEEecccCEEEEECCC---chhHHHHHHHHHHHHHcCCEEEEE--CCC-CChHHHHHHHHHHHHhCCCCC
Confidence 11123566667788999999999996 355 34456778999999864443 432 111111 2334455666542
Q ss_pred hhh--cchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011411 227 ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 298 (486)
Q Consensus 227 Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~v 298 (486)
++. -||...-.+|. +-|.||+|.=-|..=| ++|+.+- .|-.. +-|-|= +|-|++||.+..
T Consensus 200 vv~vv~g~~~~~~~L~----~~~~v~~I~fTGS~~~g~~i~~~aa~~~~-----pv~lE-lGGk~p--~iV~~dADl~~A 267 (486)
T 1t90_A 200 VFNVVYGAHDVVNGIL----EHPEIKAISFVGSKPVGEYVYKKGSENLK-----RVQSL-TGAKNH--TIVLNDANLEDT 267 (486)
T ss_dssp SEEECCCSHHHHHHHH----HCTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCEE--EEECTTSCHHHH
T ss_pred EEEEEECCHHHHHHHH----hCCCCCEEEEeCCHHHHHHHHHHHhccCC-----cEEec-cCCCCc--EEECCCCCHHHH
Confidence 222 25555445554 2478999985554322 1222111 02111 234442 344566898887
Q ss_pred HHhhhhcc----CcCCCCceE-EEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHH---
Q 011411 299 AADLLSQA----EHGPDSQVV-LVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA--- 348 (486)
Q Consensus 299 AaDLLaQA----EHdp~a~av-LvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~s--- 348 (486)
|-.++.-+ =+--.|... ++.... . ++..+.+.+.++.+.- .+.++.+
T Consensus 268 a~~i~~~~~~n~GQ~C~a~~rvv~v~~~--~-d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 344 (486)
T 1t90_A 268 VTNIVGAAFGSAGERCMACAVVTVEEGI--A-DEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEE 344 (486)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEEHHH--H-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcccCCeeEEecCC--H-HHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhC
Confidence 77665432 122334444 444332 3 6666666655554430 0111111
Q ss_pred ---------------------------------Hh---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HH
Q 011411 349 ---------------------------------LG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KW 385 (486)
Q Consensus 349 ---------------------------------l~---~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~ 385 (486)
+. .| .++.++|+|||++++|..- +--..|.++|.. .+
T Consensus 345 Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~ 424 (486)
T 1t90_A 345 GARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYF 424 (486)
T ss_dssp TCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHH
T ss_pred CCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHH
Confidence 11 12 3556889999999999841 234556788864 46
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCCCC-----cc--ccccCCcccccceeeeEEE
Q 011411 386 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YA--RMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 386 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~A--R~~SgLsV~dFlK~~s~~~ 441 (486)
..++ .+|.|++..++. .++.-+|-+| .. |+.|.-+++.|+..-++..
T Consensus 425 ~~~l-~aG~v~vN~~~~--------~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~ 478 (486)
T 1t90_A 425 RENI-DAGMLGINLGVP--------APMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478 (486)
T ss_dssp HHHC-CCSEEEESCSCC--------CCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEE
T ss_pred HHhC-CcCeEEECCCCC--------CCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 6677 699999996432 1223467655 33 5555566888888777643
No 18
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=96.47 E-value=1.1 Score=47.02 Aligned_cols=326 Identities=17% Similarity=0.102 Sum_probs=181.1
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-ceE
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TSV 151 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~-~~~ 151 (486)
..+-.+..+++-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|...-.+.. ...
T Consensus 71 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~ 133 (484)
T 3ifg_A 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKP-----------------LAEAKGEIAYAASFIEWFAEEGKRVAGDTL 133 (484)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 344455667777777777776554445444321 11223346777788886654322211 111
Q ss_pred E-ecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCc-chh
Q 011411 152 E-NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HIL 228 (486)
Q Consensus 152 ~-~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~-iLaAA~l~Gv~-eIy 228 (486)
. ..+|...-.++.|+.-|++..|.- +|+ ...+.-..||-.||+.=|+=.+|- -..... +......+|+. .++
T Consensus 134 ~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~-~~~~~~~a~ALaaGN~VVlKps~~---tp~t~~~l~~l~~~aGlP~gv~ 208 (484)
T 3ifg_A 134 PTPDANKRIVVVKEPIGVCAAITPWN-FPA-AMIARKVGPALAAGCPIVVKPAES---TPFSALAMAFLAERAGVPKGVL 208 (484)
T ss_dssp CCSSTTEEEEEEEEECSSEEEECCSS-STT-HHHHHHHHHHHHHTCCEEEECCTT---SCHHHHHHHHHHHHHTCCTTSE
T ss_pred cccCCCceeEEEecCCcEEEEECCCc-ChH-HHHHHHHHHHHHcCCEEEEECCCC---CcHHHHHHHHHHHHhCCCcccE
Confidence 1 124667778899999999999963 332 334456789999998755543321 111112 22344566653 222
Q ss_pred h--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHH-HHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHhhhh
Q 011411 229 K--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (486)
Q Consensus 229 ~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AK-r~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~vAaDLLa 304 (486)
. .| |...-.+|.- -|.||+|.=-|..=|-.+= +..+..--.|-.. +-|-|=+ |-|++||.+..|..++.
T Consensus 209 ~vv~g~~~~~g~~L~~----~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lE-lGGk~p~--iV~~dADl~~Aa~~i~~ 281 (484)
T 3ifg_A 209 SVVIGDPKAIGTEITS----NPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLE-LGGNAPF--IVFDDADLDAAVEGAIA 281 (484)
T ss_dssp EECCBCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEE-CCCCCEE--EECTTSCHHHHHHHHHH
T ss_pred EEEeCCCHHHHHHHHh----CCCcCEEEEECCHHHHHHHHHHhhccCCceEEe-cCCCCeE--EECCCCCHHHHHHHHHH
Confidence 2 24 6655566653 5889999766664332110 0000000001111 1244433 34566899887776654
Q ss_pred cc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------c-------HHHHHHHHhC-------
Q 011411 305 QA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH------- 351 (486)
Q Consensus 305 QA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~---------------r-------~~ia~~sl~~------- 351 (486)
-+ =.--.|...++.. ++.. +++.+.+.+.++.+. . ...++.+.+.
T Consensus 282 ~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~g 359 (484)
T 3ifg_A 282 SKYRNNGQTCVCTNRFFVH-ERVY-DAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTG 359 (484)
T ss_dssp HHHGGGGCSTTCCCEEEEE-GGGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHhcCCCcccCCCeEEEc-HHHH-HHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 22 1222333333333 3353 777777777776653 0 1223333221
Q ss_pred -------------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhcccc
Q 011411 352 -------------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENA 392 (486)
Q Consensus 352 -------------------------------g---~iivv~~l~eai~~aN~~APEH--Lel~~~~p~---~~l~~I~nA 392 (486)
| .|+-++|+|||++++|.. +-. ..|.++|.. .+..+++ +
T Consensus 360 G~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~GL~a~v~t~d~~~a~~~~~~l~-a 437 (484)
T 3ifg_A 360 GKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDT-EFGLAAYLYSRDIGRVWRVAEALE-Y 437 (484)
T ss_dssp CSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCS-SEESEEEEECCBHHHHHHHHHHCC-C
T ss_pred CCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-c
Confidence 1 244578999999999984 333 346677764 5677776 9
Q ss_pred ceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEE
Q 011411 393 GSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 393 GsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~ 440 (486)
|.|++..+.. .++-+|- +|..|..+..+++.|+..-++.
T Consensus 438 G~v~iN~~~~---------~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~ 481 (484)
T 3ifg_A 438 GMVGINTGLI---------SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLC 481 (484)
T ss_dssp SEEEESCSCC---------CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEE
T ss_pred ceEEEcCCCC---------CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEE
Confidence 9999996421 1234554 4567888888999998776653
No 19
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=96.43 E-value=1.2 Score=47.02 Aligned_cols=324 Identities=16% Similarity=0.116 Sum_probs=181.0
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCce
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETS 150 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~-~~~~ 150 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+-. .+.+.-+..+++.++.|.+.-.. ....
T Consensus 69 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~~~~~a~~~~~~~g~~ 131 (505)
T 3prl_A 69 PIHERVDLLYAWADLLEERKEIIGELIMHEVAKPK-----------------KSAIGEVSRTADIIRHTADEALRLNGET 131 (505)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCH-----------------HHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 44455566777888888888766555566554311 01122244555555555432111 0111
Q ss_pred EEec--C----ceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHH
Q 011411 151 VENM--K----GVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAK 220 (486)
Q Consensus 151 ~~~~--~----Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~ 220 (486)
.... + |...-.++.|+.-|++..|.- +|+ ...+.-.+||-.||+.=|+ =|.. ..|. +..+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-~P~-~~~~~~~a~ALaaGN~VVl--Kpse----~tp~ta~~l~~ll~ 203 (505)
T 3prl_A 132 LKGDQFKGGSSKKIALVEREPLGVVLAISPFN-YPV-NLAAAKIAPALVTGNTVVF--KPAT----QGSLSGIKMVEALA 203 (505)
T ss_dssp EEGGGSTTTCSSEEEEEEEEECSEEEEEECSS-STT-HHHHHHHHHHHHTTCEEEE--EECS----TTHHHHHHHHHHHH
T ss_pred ccccccccccCCceeEEEEcCCcEEEEECCCc-cHH-HHHHHHHHHHHHcCCEEEE--ECCC----CChHHHHHHHHHHH
Confidence 1111 2 445567789999999999963 332 3344567899999975444 3431 3443 223445
Q ss_pred HcCCcc-hhh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCC-CcccccCCCCCcEEEEEecCCCCH
Q 011411 221 KAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVIADIYASP 295 (486)
Q Consensus 221 l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~-~~VgID~~AGPSEvlIIAD~sAnp 295 (486)
.+|+.. ++. -| |...-.+|. .-|.||+|.=-|..=|- |++..... -.|-.. +-|-+= +|-|++||.
T Consensus 204 eaGlP~gvv~vv~g~~~~~g~~L~----~~p~vd~I~FTGS~~~G--~~i~~~aal~~v~lE-LGGk~p--~iV~~dADl 274 (505)
T 3prl_A 204 DAGAPEGIIQVVTGRGSVIGDHLV----EHPGIDMITFTGGTTTG--ERISEKAKMIPVVLE-LGGKDP--AIVLDDADL 274 (505)
T ss_dssp HTTCCTTSEEECCCCHHHHHHHHH----TCTTCCEEEEESCHHHH--HHHHHHCCSSCEEEE-CCCCEE--EEECTTCCH
T ss_pred HhCcCcCeEEEEeCCCHHHHHHHH----hCCCCCEEEEeCCHHHH--HHHHHHccCCcEEEE-CCCCCC--CccCCCCCH
Confidence 567642 222 24 666556665 35889999766664332 22111000 001111 123333 444667899
Q ss_pred HHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC--------------------c-HHHHHHHHh
Q 011411 296 VHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP--------------------R-GEFASKALG 350 (486)
Q Consensus 296 ~~vAaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~--------------------r-~~ia~~sl~ 350 (486)
+..|..++.-+ =..-.|...++.. ++.. +++.+.+.+.++.+. | ...++.+.+
T Consensus 275 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~ 352 (505)
T 3prl_A 275 KLTASQIVSGAFSYSGQRCTAIKRVFVQ-DSVA-DQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALE 352 (505)
T ss_dssp HHHHHHHHHHHHGGGGCCSSSEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccccCceEEEe-HHHH-HHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHH
Confidence 88776665422 2223344444443 3353 777777776666542 0 123333332
Q ss_pred C-----------------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccCh---HHHHh
Q 011411 351 H-----------------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDA---EKWES 387 (486)
Q Consensus 351 ~-----------------------------------g---~iivv~~l~eai~~aN~~APEH--Lel~~~~p---~~~l~ 387 (486)
. | .|+.++|+|||++++|.. +-. ..|.++|. ..++.
T Consensus 353 ~Ga~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~-~~gL~a~v~t~d~~~a~~~~~ 431 (505)
T 3prl_A 353 NGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQS-DYGLQASIFTKDTDRAINIGK 431 (505)
T ss_dssp TTCEEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTS-SEESEEEEECSCHHHHHHHHH
T ss_pred CCCEEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCC-CCCeEEEEEcCCHHHHHHHHH
Confidence 1 2 245578999999999985 333 45667776 45677
Q ss_pred hccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011411 388 IIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 388 ~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
++ .+|.|++..++. +.+.-+|- +|..|+.|.-+++.|+..-++..
T Consensus 432 ~l-~aG~V~iN~~~~--------~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~ 481 (505)
T 3prl_A 432 HL-EVGTVHINAKTE--------RGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVL 481 (505)
T ss_dssp TS-CSSEEEESSCCC--------SCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HC-CeeEEEEcCCCC--------CCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEE
Confidence 77 599999998653 12344564 55677777788999988777643
No 20
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=96.39 E-value=0.27 Score=51.45 Aligned_cols=320 Identities=17% Similarity=0.135 Sum_probs=176.1
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHhccC-CCceE
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVK-EAFDVAYNNIYAFHLAQKS-AETSV 151 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~-~ai~~A~~nI~~Fh~~Q~~-~~~~~ 151 (486)
.+-.+..+.+-+.++++.|+=..-.++...+. + .+.+ .-+..+.+.++.|.+.-.. .....
T Consensus 66 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~-------------~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~ 128 (490)
T 2ve5_A 66 MQRSRILRRAVDILRERNDELAALETLDTGKP----L-------------AETRSVDIVTGADVLEYYAGLVPAIEGEQI 128 (490)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H-------------HHHTTTHHHHHHHHHHHHHHHGGGCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----H-------------HHHhHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 34445566677777777766544445544421 0 0111 0244555666666543221 11112
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCCchHh-hhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-hh
Q 011411 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-IL 228 (486)
Q Consensus 152 ~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStv-LM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e-Iy 228 (486)
....|...-.++.|+.-|++..|. -||-.. +.-.+||-.||+.=|+= |.. .-.... .+......+|+.+ ++
T Consensus 129 ~~~~~~~~~~~~~P~GVv~~I~pw---N~P~~~~~~~~~~ALaaGN~vVlK--ps~-~tp~t~~~l~~l~~~aGlP~gvv 202 (490)
T 2ve5_A 129 PLRETSFVYTRREPLGVVAGIGAW---NYPVQIALWKSAPALAAGNAMIFK--PSE-VTPLTALKLAEIYTEAGVPDGVF 202 (490)
T ss_dssp EEETTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEEE--CCT-TSCHHHHHHHHHHHHHTCCTTSE
T ss_pred cCCCCceeeEeeccccEEEEECCC---cchHHHHHHHHHHHHHcCCEEEEE--CCC-cchHHHHHHHHHHHHhCcCcCeE
Confidence 223566677889999999999996 356433 46678999999765544 432 111111 2223445566542 22
Q ss_pred h--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHH------H-HHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011411 229 K--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------A-AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 298 (486)
Q Consensus 229 ~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~-AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~v 298 (486)
. -| |...-.+|. .-|.||+|.=-|..-|- + |+.+- . |-.. +-|-+= +|-|++||.+..
T Consensus 203 ~vv~g~~~~~~~~L~----~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~-~----v~lE-lGGk~p--~iV~~dADl~~A 270 (490)
T 2ve5_A 203 NVLTGSGREVGQWLT----EHPLIEKISFTGGTSTGKKVMASASSSSLK-E----VTME-LGGKSP--LIIFPDADLDRA 270 (490)
T ss_dssp EECCSCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHHCC-E----EEEE-CCCCCE--EEECTTSCHHHH
T ss_pred EEEeCCChHHHHHHH----hCCCcCEEEEeCCcHHHHHHHHhchhcccc-c----eEEE-cCCCce--eEECCCCCHHHH
Confidence 1 23 555555555 35889999877765432 2 22211 0 1110 124333 455677899887
Q ss_pred HHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHhC-
Q 011411 299 AADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH- 351 (486)
Q Consensus 299 AaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~~- 351 (486)
|-.++.-+ =..-.|...++... +.. ++..+.+.+.++.+.- .+.++.+.+.
T Consensus 271 a~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~G 348 (490)
T 2ve5_A 271 ADIAVMANFFSSGQVCTNGTRVFIHR-SQQ-ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQK 348 (490)
T ss_dssp HHHHHHHHHGGGGCCTTCCCEEEEEG-GGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCccCCCeEEEcH-HHH-HHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCC
Confidence 77665422 22223333333333 243 7777777776665420 1223333211
Q ss_pred -----------------------------------------C---eEEEeCCHHHHHHHhhhhc-cccceecccChH---
Q 011411 352 -----------------------------------------S---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE--- 383 (486)
Q Consensus 352 -----------------------------------------g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~--- 383 (486)
| .|+.++|+|||++++|..- +--..|.++|..
T Consensus 349 a~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 428 (490)
T 2ve5_A 349 ARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAH 428 (490)
T ss_dssp CEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred CEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 2 3455799999999999853 223456677764
Q ss_pred HHHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEE
Q 011411 384 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 384 ~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~SgLsV~dFlK~~s~~ 440 (486)
.+..++ .+|.|++..+... ++-+|-+| ..|..|.-+++.|++.-++.
T Consensus 429 ~~~~~l-~aG~v~vN~~~~~---------~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~ 480 (490)
T 2ve5_A 429 RAIHRL-EAGICWINTWGES---------PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQ 480 (490)
T ss_dssp HHHHHS-CCSEEEESCCSCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHhC-CcceEEECCCCCC---------CCCCCcCCCCCCCCCCcchHHHHHHhheeEEEE
Confidence 466676 4999999985421 24456554 56666667888898877654
No 21
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=96.35 E-value=0.84 Score=48.34 Aligned_cols=264 Identities=16% Similarity=0.210 Sum_probs=142.4
Q ss_pred EEEEEEEeceeeeEeecCCCCCCchHhh---hcccceeecCCCeEEEEcCCCCCCCCCHH---HHH-----HHHHcCCcc
Q 011411 158 RCKRVARSIGSVGLYVPGGTAVLPSTAL---MLSVPAQIAGCKTVVLATPPSQDGSICKE---VLY-----CAKKAGVTH 226 (486)
Q Consensus 158 ~lGqr~~Pi~rvG~YVPGG~a~ypStvL---M~aIPAkVAGV~~Iv~~TPP~~~G~i~p~---iLa-----AA~l~Gv~e 226 (486)
..-.++.|+.-|++..|.- ||-... .-++||-.||+.=| +-|.. ..|. .|+ +...+|+.+
T Consensus 162 ~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~a~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~~l~~aGlP~ 232 (528)
T 3v4c_A 162 EIRLVQRPVGPVAVFGASN---FPLAFSTAGGDTAAALAAGCPVV--VKGHS----AHPGTGEIVAEAVDAAIRKTGVHP 232 (528)
T ss_dssp CEEEEEEECSCEEEECCSS---STTTTSTTSHHHHHHHHHTCCEE--EECCT----TCHHHHHHHHHHHHHHHHHHTCCG
T ss_pred cceeEeeCCcEEEEECCCc---chHHHhhhhhhhHHHHhcCCEEE--EECCC----CCcHHHHHHHHHHHHHHHhcCCCc
Confidence 3456889999999999963 554432 47899999997543 34542 3443 222 233467653
Q ss_pred -hhh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHH----H--HHHHHHhcCCCCcccccCCCCCcEEEEEecCCC---
Q 011411 227 -ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQY----V--TAAKMILQNSEAMISIDMPAGPSEVLVIADIYA--- 293 (486)
Q Consensus 227 -Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~y----V--t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sA--- 293 (486)
++. .| |...-.+|.= -|.||+|.=-|..= | ++|+++--. .| +==+-|-+=++| |++|
T Consensus 233 gvv~vv~g~~~~~g~~L~~----~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~---pv-~lElGGk~p~iV--~~dAd~~ 302 (528)
T 3v4c_A 233 GVFSLIQGGSRDVGHALVQ----HPHIKAVGFTGSLAGGRALFDLCAARPEPI---PF-FGELGSVNPMFL--LPEALKA 302 (528)
T ss_dssp GGEEEECCCCHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHHSSSCC---CE-EEECCCCCCEEE--CHHHHHH
T ss_pred CeEEEEeCCCHHHHHHHHh----CCCCCEEEEECChHHHHHHHHHHhhccCCC---ce-EEecCCCCeEEE--CCCCChh
Confidence 332 23 5555555652 48899997666532 2 223212000 01 001234443433 4446
Q ss_pred CHHHHHHhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc------------HHHHH-----------
Q 011411 294 SPVHIAADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------------GEFAS----------- 346 (486)
Q Consensus 294 np~~vAaDLLaQ----AEHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r------------~~ia~----------- 346 (486)
|.+..|..++.- +=..-.|...++....... +++.+.+.+.++.+.- .+.++
T Consensus 303 dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~~~~~~gp~~~~~~~~~v~~~~~~~Ga~v~ 381 (528)
T 3v4c_A 303 RAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA-DRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFATRNAVKPL 381 (528)
T ss_dssp HHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH-HHHHHHHHHHHHTCCCEECSCHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred hHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH-HHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCCEEE
Confidence 444444444322 2222334444444432232 5555555555543310 00000
Q ss_pred -------------------------HHHh---CC---eEEEeCCHHHHHHHhhhhcccc--ceeccc--Ch---HHHHhh
Q 011411 347 -------------------------KALG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVK--DA---EKWESI 388 (486)
Q Consensus 347 -------------------------~sl~---~g---~iivv~~l~eai~~aN~~APEH--Lel~~~--~p---~~~l~~ 388 (486)
..+. .| .|+.++|+|||++++|.. +-. ..|.++ |. ..+..+
T Consensus 382 ~gG~~~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~-~~GL~a~v~t~d~d~~~a~~~a~~ 460 (528)
T 3v4c_A 382 LATESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGF-QGQLTATIHMDAGDLETARRLRPV 460 (528)
T ss_dssp ECCCCCTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHC-CCEEEEEEECCGGGHHHHHHHHHH
T ss_pred eCCCcCCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcC-CCCceEEEEcCCCCHHHHHHHHHH
Confidence 1122 13 345679999999999984 333 345666 44 457777
Q ss_pred cc-ccceeccCCCCCcc-cccc--ccCCCCCCCCCCccccc--cCCcccccceeeeEEEeCHH
Q 011411 389 IE-NAGSVFLGEWTPES-VGDY--ASGTNHVLPTYGYARMY--GGVSLDSFLKYMTVQSLTEE 445 (486)
Q Consensus 389 I~-nAGsIFlG~~tp~a-~GDY--~aGpNHvLPT~G~AR~~--SgLsV~dFlK~~s~~~~s~~ 445 (486)
++ .+|.|++..++... .++. +.|| .+-+|..|+. |..+++.|++..++|.++..
T Consensus 461 l~~~aG~V~vN~~~~~~~~~~~~pfGG~---~~~Sg~gr~~~~G~~gl~~~~~~k~~q~~p~~ 520 (528)
T 3v4c_A 461 LERKAGRVLVNGFPTGVEVVDSMVHGGP---YPASTNFGATSVGTMSIRRFLRPVAYQNMPED 520 (528)
T ss_dssp HHHHEEEEEESSCTTCCCCSTTCCCCCT---TTTBSCTTCCSSSGGGGGGGEEEEEEESCCGG
T ss_pred HhhcCcEEEEcCCCCCCccCCCCCCCCC---CCCCCCCCCCCCcHHHHHHhchhHHhhcCCcc
Confidence 77 79999999865522 1111 1111 2344557764 77899999999999988764
No 22
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=96.27 E-value=1.5 Score=46.26 Aligned_cols=320 Identities=14% Similarity=0.052 Sum_probs=177.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC---CC
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS---AE 148 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~---~~ 148 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+ . + .+.+.-+..+++.++-|.. +.. ..
T Consensus 79 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---~-------------~ea~~ev~~~~~~~~~~a~-~~~~~~g~ 140 (500)
T 2j6l_A 79 PAPKRGEIVRQIGDALREKIQVLGSLVSLEMGK-I---L-------------VEGVGEVQEYVDICDYAVG-LSRMIGGP 140 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCC-C---H-------------HHHHHHHHHHHHHHHHHHH-HTTTCCCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-C---H-------------HHHHHHHHHHHHHHHHHHH-HHHHhcCc
Confidence 344555667777777777776544333443321 0 0 0111224444455544332 222 12
Q ss_pred ceEEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHHHH--------HHH
Q 011411 149 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL--------YCA 219 (486)
Q Consensus 149 ~~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~iL--------aAA 219 (486)
+.....+|...-.++.|+.-|++..|. -|| ...++..+||-.||+.=| +=|.. ..|.+- .+.
T Consensus 141 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~al 211 (500)
T 2j6l_A 141 ILPSERSGHALIEQWNPVGLVGIITAF---NFPVAVYGWNNAIAMICGNVCL--WKGAP----TTSLISVAVTKIIAKVL 211 (500)
T ss_dssp EECCSSTTEEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCEEE--EECCG----GGHHHHHHHHHHHHHHH
T ss_pred cccccCCCceeEEEEecccEEEEECCC---cchhhHHHHHHHHHHHhCCEEE--EECCC----ccHHHHHHHHHHHHHHH
Confidence 211122454455678999999999996 366 466778899999987544 44542 345321 122
Q ss_pred HHcCCc-chhhc--chHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEec
Q 011411 220 KKAGVT-HILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIAD 290 (486)
Q Consensus 220 ~l~Gv~-eIy~v--GGAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~~~VgID~~AGPSEvlIIAD 290 (486)
..+|+. .++.+ ||...-.+|. +-|+||+|.=-|..=|- +|+++ . .|...+ -|-| -+|-|
T Consensus 212 ~~aGlP~gvv~vv~g~~~~g~~L~----~~~~vd~I~FTGS~~~g~~i~~~aa~~l-~----~v~lEL-GGk~--p~iV~ 279 (500)
T 2j6l_A 212 EDNKLPGAICSLTCGGADIGTAMA----KDERVNLLSFTGSTQVGKQVGLMVQERF-G----RSLLEL-GGNN--AIIAF 279 (500)
T ss_dssp HHTTCCGGGEEEECCSHHHHHHHH----HCTTCSEEEEESCHHHHHHHHHHHHHTT-C----EEEEEC-CCCE--EEEEC
T ss_pred HhhcCCcCeEEEEeCCHHHHHHHh----cCCCcCEEEEECCHHHHHHHHHHhccCC-C----ceEEEc-CCCC--ceEEC
Confidence 345764 33332 6765555554 24889999655553322 22221 1 144443 3555 34556
Q ss_pred CCCCHHHHHHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHH
Q 011411 291 IYASPVHIAADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEF 344 (486)
Q Consensus 291 ~sAnp~~vAaDLLaQAE----Hdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~i 344 (486)
++||.+..|-.++.-+= ..-.|...++.... .. ++..+.+.+.++.+.- ...
T Consensus 280 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 357 (500)
T 2j6l_A 280 EDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES-IH-DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGA 357 (500)
T ss_dssp TTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETT-TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHH-HH-HHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHH
Confidence 67899887777654322 22334444444432 43 6677777666665520 012
Q ss_pred HHHHHh--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccCh
Q 011411 345 ASKALG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDA 382 (486)
Q Consensus 345 a~~sl~--------------------------------------~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p 382 (486)
++.+.+ .| .|+.++|+|||++++|..- +--..|.++|.
T Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 437 (500)
T 2j6l_A 358 VEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDL 437 (500)
T ss_dssp HHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCH
T ss_pred HHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 222211 02 2345789999999999953 33356778888
Q ss_pred HHHHhhc----cccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEE
Q 011411 383 EKWESII----ENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 383 ~~~l~~I----~nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~SgLsV~dFlK~~s~~ 440 (486)
.....-. -.+|.|++..++. +.+.-+| .+|..|+.+.-+++.|+..-++.
T Consensus 438 ~~a~~~~~~~~~~~G~V~vN~~~~--------~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~ 496 (500)
T 2j6l_A 438 GRIFRWLGPKGSDCGIVNVNIPTS--------GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCT 496 (500)
T ss_dssp HHHHHHHSTTSCCSSEEEESSCTT--------CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEE
T ss_pred HHHHHHHhhccCCeeEEEECCCCc--------cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEE
Confidence 6654433 3679999997543 1122244 35677888888899999887764
No 23
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=96.18 E-value=0.6 Score=48.51 Aligned_cols=325 Identities=18% Similarity=0.162 Sum_probs=174.2
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCc
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENV-SELPDPELDAAVKEAFDVAYNNIYAFHLAQK-SAET 149 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~-~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~-~~~~ 149 (486)
...+-.+..+.+-+.++++-|+=..-.++..-+-..+ +. .|+ ....+.++.++++++++...+. +..+
T Consensus 48 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e----a~~~ev------~~~~~~~~~~a~~~~~~~~~~~~~~~~ 117 (457)
T 3lns_A 48 DVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV----VDLAEI------GAVLHEIDFALAHLDEWVAPVSVPSPD 117 (457)
T ss_dssp SHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH----HHHHTH------HHHHHHHHHHHHHHHHHTSCEEECCCG
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH----HHHHHH------HHHHHHHHHHHHHHHHhhccccccccc
Confidence 3445556677777777777776555555555431100 00 011 1233445666666666543221 1111
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHHHH-HHHHH---c---
Q 011411 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKK---A--- 222 (486)
Q Consensus 150 ~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~iL-aAA~l---~--- 222 (486)
. ..|...-.++.|+.-|++..|.- +|+ ...++-++||-.||+. ||+-|.. ..|.+- .-+++ +
T Consensus 118 ~---~~~~~~~~~~~P~GVv~~I~PwN-~P~-~~~~~~~~~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~~alP~ 186 (457)
T 3lns_A 118 I---IAPSECYVVQEPYGVTYIIGPFN-YPV-NLTLTPLIGAIIGGNT--CIIKPSE----TTPETSAVIEKIIAEAFAP 186 (457)
T ss_dssp G---GCSCEEEEEEEECCEEEEECCSS-STT-HHHHHHHHHHHHTTCE--EEEECCT----TCHHHHHHHHHHHHHHCCT
T ss_pred c---CCCcceEEEeecceEEEEECCCc-chH-HHHHHHHHHHHHcCCE--EEEECCC----CChHHHHHHHHHHHHhCCH
Confidence 1 13445667889999999999963 333 4455567899999975 3444542 344321 11121 1
Q ss_pred CCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHH
Q 011411 223 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 296 (486)
Q Consensus 223 Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~ 296 (486)
|+=.+. -||.....+|. + |+||+|.=-|..=| ++|+.+. . |-. -+.|-+= +|-|++||.+
T Consensus 187 gvv~vv-~g~~~~~~~L~----~-~~vd~V~fTGS~~~G~~i~~~aa~~l~-p----v~l-ElGGk~p--~iV~~dADl~ 252 (457)
T 3lns_A 187 EYVAVI-QGGRDENSHLL----S-LPFDFIFFTGSPNVGKVVMQAAAKHLT-P----VVL-ELGGKCP--LIVLPDADLD 252 (457)
T ss_dssp TTEEEC-CCCHHHHHHHT----T-SCCSEEEEESCHHHHHHHHHHHHTTTC-C----EEE-ECCCCEE--EEECTTCCHH
T ss_pred hhEEEe-cCCHHHHHHHh----c-CCCCEEEEECCHHHHHHHHHHHhhccC-c----eEE-ECCCCCC--CeECCCCCHH
Confidence 222222 25666666775 2 68999976665433 2222111 0 110 1223333 4456779999
Q ss_pred HHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcC-C---------cH-------HHHHH--------
Q 011411 297 HIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL-P---------RG-------EFASK-------- 347 (486)
Q Consensus 297 ~vAaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l-~---------r~-------~ia~~-------- 347 (486)
..|..++.-+ =.--.|...++... +.. +++.+.+.+.++.+ | .. +.++.
T Consensus 253 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~p~~~~~gpli~~~~~~rv~~~i~~a~~~~~~g 330 (457)
T 3lns_A 253 QTVNQLMFGKFINSGQTXIAPDYLYVHY-SVK-DALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVG 330 (457)
T ss_dssp HHHHHHHHHHHGGGGCCTTSEEEEEEEG-GGH-HHHHHHHHHHHHHHCCSTTTTCCCSSHHHHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHHHHhCCCCccCCceEEEcH-HHH-HHHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHHHHhcCCeEEeC
Confidence 8777665322 22233444444433 243 55555555555433 1 00 01111
Q ss_pred -----------------------HHh---CC---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HHHhhccccc
Q 011411 348 -----------------------ALG---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KWESIIENAG 393 (486)
Q Consensus 348 -----------------------sl~---~g---~iivv~~l~eai~~aN~~APEHL--el~~~~p~---~~l~~I~nAG 393 (486)
.+. .| .|+.++|+|||++++|.+.|-.| .|.++|.. .+..++ .+|
T Consensus 331 g~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l-~aG 409 (457)
T 3lns_A 331 SQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQI-QSG 409 (457)
T ss_dssp CCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTS-CCS
T ss_pred CccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhC-Ccc
Confidence 111 13 34568999999999999444444 56678864 466666 489
Q ss_pred eeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011411 394 SVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 394 sIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
.|++..++.- ..+.-+|- +|..|..+.-+++.|+..-++..
T Consensus 410 ~v~vN~~~~~-------~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 410 DAQVNGVMLH-------AFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EEEESCCSGG-------GGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred eEEEcCCCCC-------CCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 9999975421 11233454 45567777778888887766653
No 24
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=96.17 E-value=1.7 Score=46.15 Aligned_cols=322 Identities=16% Similarity=0.164 Sum_probs=178.6
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-ce
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TS 150 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~-~~ 150 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+. -.+.+.-+..+++.++.|...-.+-. ..
T Consensus 92 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~ev~~~~~~~~~~a~~~~~~~g~~ 154 (520)
T 3ed6_A 92 TAETRGKKVRAIADKIKEHREALARLETLDTGKT-----------------LEESYADMDDIHNVFMYFAGLADKDGGEM 154 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCee
Confidence 3344555677777777777776555555544321 11222236677777777755332211 11
Q ss_pred EEec-CceEEEEEEEeceeeeEeecCCCCCCchH-hhhcccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCcc-
Q 011411 151 VENM-KGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH- 226 (486)
Q Consensus 151 ~~~~-~Gv~lGqr~~Pi~rvG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~-iLaAA~l~Gv~e- 226 (486)
.... +|...-.++.|+.-|++..|.- ||-. .+.-.+||-.||+.= |+-|.. .-..... +......+|+..
T Consensus 155 ~~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~apALaaGNtV--VlKPs~-~tp~t~~~l~~l~~eaGlP~g 228 (520)
T 3ed6_A 155 IDSPIPDTESKIVKEPVGVVTQITPWN---YPLLQASWKIAPALATGCSL--VMKPSE-ITPLTTIRVFELMEEVGFPKG 228 (520)
T ss_dssp ECCSSTTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHHTCEE--EEECCT-TCCHHHHHHHHHHHHHCCCTT
T ss_pred cccCCCCCcccccccCccEEEEECCCc---cHHHHHHHHHHHHHHcCCEE--EEEcCC-cchHHHHHHHHHHHHhCCCCC
Confidence 1111 4666778899999999999963 5533 345678999999754 344542 1111112 223445566542
Q ss_pred ---hhhcchHHHHHHHhhCCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011411 227 ---ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (486)
Q Consensus 227 ---Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~y------Vt~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~ 297 (486)
+..-.|...-.+|. +-|.||+|.=-|..= .++|+.+- .|...+ -|-+=++| +++||.+.
T Consensus 229 vvnvv~g~~~~~g~~L~----~~p~vd~V~FTGS~~vG~~i~~~aa~~l~-----~v~lEL-GGk~p~IV--~~dADl~~ 296 (520)
T 3ed6_A 229 TINLILGAGSEVGDVMS----GHKEVDLVSFTGGIETGKHIMKNAANNVT-----NIALEL-GGKNPNII--FDDADFEL 296 (520)
T ss_dssp SEEECCSCCTTHHHHHH----HCTTCSEEEEESCHHHHHHHHHHHHTTTC-----EEEEEC-CCCCEEEE--CTTSCHHH
T ss_pred eEEEEeCCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHhhhcCC-----CEEEEc-CCCCeeEE--CCCCCHHH
Confidence 22222444444554 248899997666642 23332211 022221 24444433 33589998
Q ss_pred HHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHhC
Q 011411 298 IAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH 351 (486)
Q Consensus 298 vAaDLLaQAEHd----p~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~~ 351 (486)
.|..++.-+=.. -.|...++.. +++. +++.+.+.+.++.+.- ...++.+.+.
T Consensus 297 Aa~~i~~~~f~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 374 (520)
T 3ed6_A 297 AVDQALNGGYFHAGQVCSAGSRILVQ-NSIK-DKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAE 374 (520)
T ss_dssp HHHHHHHHHHGGGGTSTTCCCEEEEE-HHHH-HHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcccCceEEEc-HHHH-HHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhC
Confidence 777766432222 2233333333 3453 7777777777665420 1223333221
Q ss_pred ------------------------------------------C---eEEEeCCHHHHHHHhhhhc-cccceecccChH--
Q 011411 352 ------------------------------------------S---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE-- 383 (486)
Q Consensus 352 ------------------------------------------g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~-- 383 (486)
| .|+.++|+|||++++|..- +=-..|.++|..
T Consensus 375 Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 454 (520)
T 3ed6_A 375 GATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKA 454 (520)
T ss_dssp TCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 2 2455899999999999743 223456778864
Q ss_pred -HHHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011411 384 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 384 -~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgLsV~dFlK~~s~~ 440 (486)
.+..+++ +|.|++..+... +.-+|-+ |..|..+.-+++.|+..-++.
T Consensus 455 ~~~a~~l~-aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 455 QRVANKLK-LGTVWINDFHPY---------FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHSC-CSEEEESCSCCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHCC-cceEEECCCCCC---------CCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 5677775 999999976432 1234544 456667777888998877654
No 25
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=96.17 E-value=1.7 Score=46.19 Aligned_cols=321 Identities=17% Similarity=0.170 Sum_probs=179.2
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceE
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSV 151 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~-~~~~ 151 (486)
..+-.+..+.+-+.++++.|+=..-.++..-+- + .+.+.-+..+++.++.|.+.-..- ....
T Consensus 84 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~l~~~a~~~~~~~~~~~ 146 (528)
T 3u4j_A 84 GAERSRLMFKVADLILARQEELALIESLEVGKP----------------I-AQARGEIGFCADLWSYAAGQARALEGQTH 146 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 344455677777777777776555555544321 1 111223556666666665432111 1111
Q ss_pred Eec-CceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-h
Q 011411 152 ENM-KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 227 (486)
Q Consensus 152 ~~~-~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e-I 227 (486)
... +|...-.++.|+.-|++..|.- || ...+.-.+||-.||+.=|+ -|.. .-.... .+......+|+.. +
T Consensus 147 ~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~eaGlP~gv 220 (528)
T 3u4j_A 147 NNIGDDRLGLVLREPVGVVGIITPWN---FPFIIASERVPWAIGSGCTVVL--KPSE-FTSGTSIRLAELAREAGIPDGV 220 (528)
T ss_dssp CCSCTTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEE--ECCT-TCCHHHHHHHHHHHHHTCCTTS
T ss_pred ccCCCCceeEEEeccceEEEEECCCc---cHHHHHHHHHHHHHHcCCeEEE--EcCC-ccHHHHHHHHHHHHHhCCCCCe
Confidence 111 5667778899999999999964 55 3445567899999975443 4432 111111 2223445666542 2
Q ss_pred hh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011411 228 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 298 (486)
Q Consensus 228 y~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~v 298 (486)
+. -| |...-.+|.= -|.||+|.=-|..=| ++|+.+- .|...+ -|-+= +|-|++||.+..
T Consensus 221 v~vv~g~~~~~g~~L~~----~p~vd~I~FTGS~~~G~~i~~~aa~~lk-----~v~lEL-GGk~p--~iV~~dADl~~A 288 (528)
T 3u4j_A 221 FNVVTGYGDPAGQVLAE----DPNVDMVAFTGSVRVGTKLGEIAARTVK-----RVGLEL-GGKGP--QIVFADADLDAA 288 (528)
T ss_dssp EEECCCSSTTHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEEC-CCCEE--EEECTTSCHHHH
T ss_pred EEEEeCCcHHHHHHHHh----CCCcCEEEEeCCHHHHHHHHHHHHhcCC-----ceEEec-CCCCe--eEECCCCCHHHH
Confidence 22 13 5555555652 488999976664322 2222111 122222 24443 444667899988
Q ss_pred HHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHhC-
Q 011411 299 AADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH- 351 (486)
Q Consensus 299 AaDLLaQAE----Hdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~~- 351 (486)
|..++.-+= .--.|...|+... ++. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 289 a~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 366 (528)
T 3u4j_A 289 ADGIAYGVYHNAGQCCISGSRLLVQE-GIR-DALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSG 366 (528)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEEG-GGH-HHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCCCCcCCCEEEEec-hHH-HHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCC
Confidence 777664322 2223444444433 343 6666666665554410 1122222211
Q ss_pred --------------------------------------C---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HH
Q 011411 352 --------------------------------------S---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KW 385 (486)
Q Consensus 352 --------------------------------------g---~iivv~~l~eai~~aN~~APEHL--el~~~~p~---~~ 385 (486)
| .|+.++|+|||++++|.. +-.| .|.++|.. .+
T Consensus 367 a~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~GL~a~v~t~d~~~a~~~ 445 (528)
T 3u4j_A 367 AELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANAT-EFGLSASVWSTNLETALQT 445 (528)
T ss_dssp CEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCS-SCCSEEEEECSBHHHHHHH
T ss_pred CEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcC-CCCcEEEEEcCCHHHHHHH
Confidence 2 345678999999999985 3344 45677764 57
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEEE
Q 011411 386 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 386 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~SgLsV~dFlK~~s~~~ 441 (486)
+.++ .+|.|++..++.. +.-+|=+| ..|+.|..+++.|+..-++..
T Consensus 446 ~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 496 (528)
T 3u4j_A 446 IRRI-RAGRCWINSVIDG---------TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHV 496 (528)
T ss_dssp HHHS-CCSEEEESCCSCC---------CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEE
T ss_pred HHhC-CeeEEEECCCCCC---------CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 7777 5999999986421 23456554 567778888999988777543
No 26
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=96.13 E-value=1.7 Score=45.89 Aligned_cols=317 Identities=16% Similarity=0.096 Sum_probs=178.5
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE--
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV-- 151 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~-- 151 (486)
.+-.+..+.+-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|...-.+.....
T Consensus 92 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~ 154 (504)
T 3ek1_A 92 KERAGILRKWFDLIIANADDIALIMTSEQGKP-----------------LAEARGEVLYAASFIEWFAEEAKRVYGDTIP 154 (504)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 33445566666666666665444444433321 11222335666777766654322211111
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCcc-hhh
Q 011411 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH-ILK 229 (486)
Q Consensus 152 ~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~-iLaAA~l~Gv~e-Iy~ 229 (486)
...+|...-.++.|+.-|++..|.- +|+ ...+.-.+||-.||+.=| +-|.. .-..... +..+...+|+.+ ++.
T Consensus 155 ~~~~~~~~~~~~~P~GVV~~I~PwN-~P~-~~~~~~~a~ALaaGN~VV--lKPs~-~tp~t~~~l~~l~~eaGlP~gv~~ 229 (504)
T 3ek1_A 155 APQNGQRLTVIRQPVGVTAAITPWN-FPA-AMITRKAAPALAAGCTMI--VRPAD-LTPLTALALGVLAEKAGIPAGVLQ 229 (504)
T ss_dssp CSSTTEEEEEEEEECCEEEEECCSS-STT-HHHHHHHHHHHHHTCEEE--EECCT-TSCHHHHHHHHHHHHTTCCTTTEE
T ss_pred cccccccceeeccCceEEEEECCCc-chH-HHHHHHHHHHHHcCCEEE--EECCC-cChHHHHHHHHHHHHhCCCcccEE
Confidence 1234666777899999999999963 333 344456789999997544 34442 1111122 223455677643 332
Q ss_pred ---cchHHHHHHHhhCCCCCCCceEEecCCcHHHH------HH---HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011411 230 ---AGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AA---KMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (486)
Q Consensus 230 ---vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~A---Kr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~ 297 (486)
-+|...-.+|.= -|.||+|.=-|..=|- +| |++... +-|-|= +|-|++||.+.
T Consensus 230 vv~g~~~~~g~~L~~----~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lE---------LGGk~p--~IV~~dADl~~ 294 (504)
T 3ek1_A 230 IVTGKAREIGAELTS----NDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLE---------LGGNAP--FIVFDDADLDA 294 (504)
T ss_dssp ECCSCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEE---------CCCCEE--EEECTTSCHHH
T ss_pred EEeCCCHHHHHHHHh----CCCcCEEEEECCHHHHHHHHHhhhhhcCCeEec---------CCCCCe--eEEcCCCCHHH
Confidence 235655566653 5889999866664332 22 222211 124333 44466789988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------c-------HHHHHHHHhC
Q 011411 298 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH 351 (486)
Q Consensus 298 vAaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~---------------r-------~~ia~~sl~~ 351 (486)
.|..++.-+ =.--.|...++.. ++.. +++.+.+.+.++.+. . .+.++.+.+.
T Consensus 295 Aa~~i~~~~f~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 372 (504)
T 3ek1_A 295 AVDGAMVSKYRNAGQTCVCANRIYVQ-RGVY-DKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSK 372 (504)
T ss_dssp HHHHHHHHHHGGGGCSTTSEEEEEEE-HHHH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEe-hhHH-HHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHC
Confidence 777665422 2223344444443 3453 777777777776652 0 1233333322
Q ss_pred ------------------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHh
Q 011411 352 ------------------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWES 387 (486)
Q Consensus 352 ------------------------------------g---~iivv~~l~eai~~aN~~APEH--Lel~~~~p~---~~l~ 387 (486)
| .|+.++|+|||++++|.. +-. ..|.++|.. .+..
T Consensus 373 Ga~v~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~GL~a~v~t~d~~~a~~~a~ 451 (504)
T 3ek1_A 373 GAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDT-IFGLAAYFYTENFSRAIRVSE 451 (504)
T ss_dssp TCEEEECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCS-SCCSEEEEECCBHHHHHHHHH
T ss_pred CCEEEeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCC-CCCeEEEEEcCCHHHHHHHHH
Confidence 1 234578999999999985 333 346677764 4667
Q ss_pred hccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011411 388 IIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 388 ~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgLsV~dFlK~~s~~ 440 (486)
+++ +|.|++..++. .+.-+|=+ |..|..+.-+++.|+..-++.
T Consensus 452 ~l~-aG~V~vN~~~~---------~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 499 (504)
T 3ek1_A 452 ALE-YGMVGHNTGLI---------SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYIC 499 (504)
T ss_dssp HSC-CSEEEESCSCC---------CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEE
T ss_pred hCC-cCeEEECCCCC---------CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEE
Confidence 774 99999996541 12335544 456777888999998876654
No 27
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=96.12 E-value=1.4 Score=45.36 Aligned_cols=326 Identities=11% Similarity=0.097 Sum_probs=176.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHH-------HHHHHHHHHHHHHHHHhc
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAV-------KEAFDVAYNNIYAFHLAQ 144 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~-------~~ai~~A~~nI~~Fh~~Q 144 (486)
...+-.+..+.+-+.++++-|+=..-.++...+-.. ..+.+.. ..-++.++++++.|....
T Consensus 34 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~------------~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~ 101 (427)
T 1o20_A 34 TTREKNKAIKKIAEKLDERRKEILEANRIDVEKARE------------RGVKESLVDRLALNDKRIDEMIKACETVIGLK 101 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccc------------ccccHHHHHHHhcCHHHHHHHHHHHHHHHhcc
Confidence 444555667777777777777644444444432100 0011111 124777888888887533
Q ss_pred cCCCceEE--e-cCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHHH-HHHHH
Q 011411 145 KSAETSVE--N-MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAK 220 (486)
Q Consensus 145 ~~~~~~~~--~-~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i-LaAA~ 220 (486)
.+...... . .+|...-.++.|+.-|++..| +| |...+...+||-.||+.=|+= |.. ..|.+ +.-++
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p---~p-~~~~~~~~~~ALaaGNtVVlK--ps~----~tp~t~~~l~~ 171 (427)
T 1o20_A 102 DPVGEVIDSWVREDGLRIARVRVPIGPIGIIYE---SR-PNVTVETTILALKSGNTILLR--GGS----DALNSNKAIVS 171 (427)
T ss_dssp CCTTCEEEEEECTTSCEEEEEEEECCCEEEECC---SC-THHHHHHHHHHHHTTCCEEEE--CCG----GGHHHHHHHHH
T ss_pred cccCccccccccCCCceeEEEeecceeEEEEec---CC-hHHHHHHHHHHHHcCCEEEEE--CCH----hHHHHHHHHHH
Confidence 22211111 1 236555677899999999998 35 677778889999999975543 431 23421 11222
Q ss_pred -------HcCCc-chhh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhc--CCCCcccccCCCCCcEEEE
Q 011411 221 -------KAGVT-HILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQ--NSEAMISIDMPAGPSEVLV 287 (486)
Q Consensus 221 -------l~Gv~-eIy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~--~~~~~VgID~~AGPSEvlI 287 (486)
.+|+. .++. .| |...++++- ..-|+||+|.=-|..-| .|++.. .. .|-. -+-|-|= +
T Consensus 172 l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L---~~~~~v~~I~fTGS~~~--G~~i~~~a~~--~v~l-ELGGk~p--~ 241 (427)
T 1o20_A 172 AIREALKETEIPESSVEFIENTDRSLVLEMI---RLREYLSLVIPRGGYGL--ISFVRDNATV--PVLE-TGVGNCH--I 241 (427)
T ss_dssp HHHHHHTTSSSCGGGEEECCCCCTHHHHHHT---TCTTTCSEEEECSCHHH--HHHHHHHCSS--CBCC-CCCCCEE--E
T ss_pred HHHHHHHHcCCCcccEEEecCCChHHHHHHH---hCCCCccEEEeCCChHH--HHHHHHhcCC--CEEE-ecCCCce--E
Confidence 34654 3333 24 333333322 23478999996666433 232221 10 0211 1335553 4
Q ss_pred EecCCCCHHHHHHhhhhccCc---CCCCceEEEecCchhhHHHHHHHHHHHHhcCCc------H--HH----H---HHHH
Q 011411 288 IADIYASPVHIAADLLSQAEH---GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------G--EF----A---SKAL 349 (486)
Q Consensus 288 IAD~sAnp~~vAaDLLaQAEH---dp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r------~--~i----a---~~sl 349 (486)
|-|++||.+..|-.++.-+=. .-.|...++... +.. ++..+.+.+.++.+.- + .+ . ...+
T Consensus 242 iV~~dADl~~Aa~~i~~~~f~n~G~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~~~~~gg~~~~~~~Ptl~~~~~~i~ 319 (427)
T 1o20_A 242 FVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHE-KIA-KEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDW 319 (427)
T ss_dssp EECTTSCHHHHHHHHHHHHHSCTTSTTSEEEEEEEH-HHH-HHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGT
T ss_pred EEeCCCCHHHHHHHHHHHhccCCCCCCCccEEEEeh-hhH-HHHHHHHHHHHHHcCCeeecChhhhhhCCcccCCCcchh
Confidence 445668988766555432211 223333333332 243 6666666655554431 0 00 0 0112
Q ss_pred h---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH---HHhhccccceeccCCCCCccccccccCCCCCCCCC
Q 011411 350 G---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY 419 (486)
Q Consensus 350 ~---~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~~---~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~ 419 (486)
. .| .|+-++|+|||++++|..- +--..|.++|... +..++ .+|.|++..++.. ++-+|-+
T Consensus 320 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~V~iN~~~~~---------~~~~pfG 389 (427)
T 1o20_A 320 PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEI-DAAAVYVNASTRF---------TDGGQFG 389 (427)
T ss_dssp TCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHC-CSSEEEESSCGGG---------CSTTTTT
T ss_pred hcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhC-CccEEEECCCCcc---------CCCCCCC
Confidence 2 24 4567899999999999842 2345567888754 55665 6899999975431 2335555
Q ss_pred Ccc---------ccccCCcccccceeeeEEE
Q 011411 420 GYA---------RMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 420 G~A---------R~~SgLsV~dFlK~~s~~~ 441 (486)
|.. |..+..+++.|+..-++..
T Consensus 390 g~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~ 420 (427)
T 1o20_A 390 FGAEIGISTQRFHARGPVGLRELTTYKFVVL 420 (427)
T ss_dssp CSCCSCEECSSSSCCEECCTGGGEEEEEEEE
T ss_pred CcccccccCCcccCCChHHHHHHhceEEEEE
Confidence 332 2345667888888777654
No 28
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=96.10 E-value=1.6 Score=46.03 Aligned_cols=323 Identities=14% Similarity=0.110 Sum_probs=170.8
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEEe
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVEN 153 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~~~ 153 (486)
.+-.+..+.+.+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|...-.+..-....
T Consensus 72 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~ 134 (508)
T 3r64_A 72 AERSAIIYRAAELLEEHREEIVEWLIKESGST-----------------RSKANLEITLAGNITKESASFPGRVHGRISP 134 (508)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCC-----------------HHHHHHHHHHHHHHHHHHTTSTTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHhhhhcCcccc
Confidence 33445566666666666665444444433210 1122223666777777665432211112221
Q ss_pred --cCceEEEEEEEeceeeeEeecCCCCCCchH-hhhcccceeecCCCeEEEEcCCCCCCCCCHHH-----HHHHHHcCCc
Q 011411 154 --MKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-----LYCAKKAGVT 225 (486)
Q Consensus 154 --~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i-----LaAA~l~Gv~ 225 (486)
.+|...-.++.|+.-|++..|. -||-. .+.-.+||-.||+.=| +-|.. ..|.+ ..+...+|+.
T Consensus 135 ~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~~l~~ll~~aGlP 205 (508)
T 3r64_A 135 SNTPGKENRVYRVAKGVVGVISPW---NFPLNLSIRSVAPALAVGNAVV--IKPAS----DTPVTGGVIPARIFEEAGVP 205 (508)
T ss_dssp CSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT----TCHHHHTHHHHHHHHTTTCC
T ss_pred cCCCCceeEEEEecceEEEEECCC---cchHHHHHHHHHHHHhcCCEEE--EECCC----CChHHHHHHHHHHHHHhCcC
Confidence 3467778889999999999996 35543 4456789999997544 44432 34432 2344556654
Q ss_pred -chh---hcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHH-HHhcC--CCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011411 226 -HIL---KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQN--SEAMISIDMPAGPSEVLVIADIYASPVHI 298 (486)
Q Consensus 226 -eIy---~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AK-r~v~~--~~~~VgID~~AGPSEvlIIAD~sAnp~~v 298 (486)
.++ .-+|...-.+|.= -|.||+|.=-|..=|-.+= +..+. ..-.|-.. +-|-+= +|-|++||.+..
T Consensus 206 ~gvv~vv~g~~~~~g~~L~~----~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lE-lGGk~p--~iV~~dADl~~A 278 (508)
T 3r64_A 206 AGVISTVAGAGSEIGDHFVT----HAVPKLISFTGSTPVGRRVGELAINGGPMKTVALE-LGGNAP--FVVLADADIDAA 278 (508)
T ss_dssp TTTEEECCCCTTTTHHHHHH----CSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEE-CCCCCE--EEECTTSCHHHH
T ss_pred cCeEEEEeCCCHHHHHHHhh----CCCccEEEEECCHHHHHHHHHHhhcccCCCceEee-cCCcCc--eEECCCCCHHHH
Confidence 222 2234555555543 4789999777765432110 01100 00001111 124443 444667899887
Q ss_pred HHhhhh----ccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----c------------------HHHHHHHHhC-
Q 011411 299 AADLLS----QAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALGH- 351 (486)
Q Consensus 299 AaDLLa----QAEHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~----r------------------~~ia~~sl~~- 351 (486)
|-.++. .+=.--.|...++... ++. ++..+.+.+.++.+. . ...++.+.+.
T Consensus 279 a~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 356 (508)
T 3r64_A 279 AQAAAVGAFLHQGQICMSINRVIVDA-AVH-DEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEG 356 (508)
T ss_dssp HHHHHHHHHTSTTCTTTCCSEEEEEH-HHH-HHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCCCCcccCcEEEEeh-hHH-HHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcC
Confidence 766654 3323333444444433 353 777777777666541 0 1223332211
Q ss_pred ----------------------------------C---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHHhhcc
Q 011411 352 ----------------------------------S---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWESIIE 390 (486)
Q Consensus 352 ----------------------------------g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~l~~I~ 390 (486)
| .|+.++|+|||++++|..- +--..|.++|.. .+..++
T Consensus 357 a~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l- 435 (508)
T 3r64_A 357 ATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQI- 435 (508)
T ss_dssp CEEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTS-
T ss_pred CEEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhC-
Confidence 2 2345789999999999863 223456677864 566666
Q ss_pred ccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEE
Q 011411 391 NAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 391 nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~SgLsV~dFlK~~s~~ 440 (486)
.+|.|++..++.. .+.-+| .+|+.|+.+..+++.|++.-++.
T Consensus 436 ~aG~V~vN~~~~~--------~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~ 482 (508)
T 3r64_A 436 DSGMVHINDLTVN--------DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIG 482 (508)
T ss_dssp CSSEEEECC----------------------------CCCHHHHHHHTEEEEEEE
T ss_pred CcceEEEcCCCCC--------CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEE
Confidence 5899999986532 112233 56777888888999998876654
No 29
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=95.85 E-value=1.4 Score=46.48 Aligned_cols=320 Identities=14% Similarity=0.091 Sum_probs=174.3
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc---e
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET---S 150 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~---~ 150 (486)
.+-.+..+.+-+.++++.|+=..-.++..-+- +......-+..+++.++.|.+. ..+ | .
T Consensus 83 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~e~~~~ev~~~~~~~~~~a~~-~~~-~~g~~ 144 (501)
T 1bxs_A 83 SERGRLLNKLADLIERDRLLLATMEAMNGGKL----------------FSNAYLMDLGGCIKTLRYCAGW-ADK-IQGRT 144 (501)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC----------------HHHHHHTHHHHHHHHHHHHHHH-GGG-CCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHHHH-HHH-hhCCe
Confidence 34455677777777777776555555554321 0111122244555666655432 111 1 1
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-h
Q 011411 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 227 (486)
Q Consensus 151 ~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e-I 227 (486)
+...+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+=|.. .-.... .+......+|+.+ +
T Consensus 145 ~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~t~~~l~~l~~~aGlP~gv 218 (501)
T 1bxs_A 145 IPMDGNFFTYTRSEPVGVCGQIIPW---NFPLLMFLWKIGPALSCGNT--VVVKPAE-QTPLTALHMGSLIKEAGFPPGV 218 (501)
T ss_dssp ECCSSSEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TCCHHHHHHHHHHHHHTCCTTS
T ss_pred eeccCCcceeEEecCCceEEEECCC---cchHHHHHHHHHHHHHcCCe--eeccCCC-ccHHHHHHHHHHHHHhCCCcce
Confidence 1123455667789999999999996 367 4455678999999996 3344542 111111 2334455566542 2
Q ss_pred hh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011411 228 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (486)
Q Consensus 228 y~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~A-Kr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~ 297 (486)
+. -| |...-.+|. .-|.||+|.=-|..-| ++| +.+. .|-.. +-|-+= +|-|++||.+.
T Consensus 219 ~~vv~g~~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~-----~v~lE-LGGk~p--~iV~~dADl~~ 286 (501)
T 1bxs_A 219 VNIVPGYGPTAGAAIS----SHMDVDKVAFTGSTEVGKLIKEAAGKSNLK-----RVSLE-LGGKSP--CIVFADADLDN 286 (501)
T ss_dssp EEECCSCTTTHHHHHH----TCTTCSEEEEESCHHHHHHHHHHHHHTTCC-----EEEEE-CCCCCE--EEECTTSCHHH
T ss_pred EEEEecCchHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHhhhccCC-----cEEEe-cCCcCe--EEECCCCCHHH
Confidence 22 24 555555554 2588999974444332 233 1110 01111 224453 34456689988
Q ss_pred HHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHh-
Q 011411 298 IAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG- 350 (486)
Q Consensus 298 vAaDLLaQAEH----dp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~- 350 (486)
.|-.++.-+=. --.|...++... +.. ++..+.+.+.++.+.- ...++.+.+
T Consensus 287 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 364 (501)
T 1bxs_A 287 AVEFAHQGVFYHQGQCCIAASRLFVEE-SIY-DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKE 364 (501)
T ss_dssp HHHHHHHHHHTTTTCCTTCCCEEEEEH-HHH-HHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEch-hHH-HHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhC
Confidence 77776643211 122333333332 343 6676666666655420 011222211
Q ss_pred -------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHH
Q 011411 351 -------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWE 386 (486)
Q Consensus 351 -------------------------------------~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~l 386 (486)
.| .|+.++|+|||++++|..- +--..|.++|.. .++
T Consensus 365 Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 444 (501)
T 1bxs_A 365 GAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVS 444 (501)
T ss_dssp TCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHH
Confidence 01 2445789999999999842 223456677764 566
Q ss_pred hhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEEE
Q 011411 387 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 387 ~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
.++ .+|.|++..++.. + .-+|-+ |..|+.+..+++.|+..-++..
T Consensus 445 ~~l-~aG~V~iN~~~~~-------~--~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~ 494 (501)
T 1bxs_A 445 SAL-QSGTVWVNCYSVV-------S--AQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTI 494 (501)
T ss_dssp HHS-CCSEEEESCCCCC-------C--TTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred Hhc-CeeEEEECCCCCC-------C--CCCCCCCcCcCCcCccchHHHHHHhhCeeEEEE
Confidence 776 4899999976431 1 124544 4556666677889988777643
No 30
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=95.82 E-value=2.3 Score=44.79 Aligned_cols=319 Identities=15% Similarity=0.146 Sum_probs=174.8
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--Cc
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA--ET 149 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~--~~ 149 (486)
...+-.+..+++-+.++++.|+=..-.++..-+. +....+.-+..+++.++.|...-..- ..
T Consensus 82 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~ 145 (498)
T 4f3x_A 82 TPAERSNALLKIADAIEKEADEFAALEALNCGKP----------------INAVKNDELPAIIDCWRFFAGAVRNLHAPA 145 (498)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------HHHHhHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3444455666777777777766544444443321 01111233566667777665432211 11
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHHH-HHHHHHc-----
Q 011411 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKA----- 222 (486)
Q Consensus 150 ~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i-LaAA~l~----- 222 (486)
.....+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+.=| +-|.. ..|.+ +.-++++
T Consensus 146 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGNtVV--lKPs~----~tp~t~~~l~~l~~ealP 216 (498)
T 4f3x_A 146 AGEYLPGHTSMIRRDPIGIVGSIAPW---NYPLMMMAWKLAPAIGGGNTVV--FKPSE----QTPLTALKLARLIADILP 216 (498)
T ss_dssp BEEEETTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT----TCCHHHHHHHHHHHTTSC
T ss_pred ccCCcccccceEEEcCcceEEEECCC---chHHHHHHHHHHHHHHcCCeEE--EECCc----ccHHHHHHHHHHHHHhCC
Confidence 11123566777889999999999996 355 344566789999997544 44542 23322 2222221
Q ss_pred -CCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCH
Q 011411 223 -GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASP 295 (486)
Q Consensus 223 -Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp 295 (486)
|+=.+..-.|...-.+|. +-|.||+|.=-|..=| ++|+.+- .|-.. +-|-+= +|-|++||.
T Consensus 217 ~gv~nvv~g~~~~~g~~L~----~~p~v~~V~FTGS~~~G~~i~~~aa~~~k-----~v~lE-lGGk~p--~IV~~dADl 284 (498)
T 4f3x_A 217 EGVVNVITGRGETVGNALI----NHPKVGMVSITGDIATGKKVLAAAAKTVK-----RTHLE-LGGKAP--VIVYGDADL 284 (498)
T ss_dssp TTSEEECCCCTTTHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCEE--EEECTTSCH
T ss_pred cCeEEEEeCCchHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHHhhCC-----ceeec-CCCCCc--EEECCCCCH
Confidence 333333333555555665 2588999977775332 2222110 01111 124333 344667899
Q ss_pred HHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHH
Q 011411 296 VHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL 349 (486)
Q Consensus 296 ~~vAaDLLaQAEHd----p~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl 349 (486)
+..|..++.-+=.. -.|...++.... .. +++.+.+.+.++.+.- .+.++.+.
T Consensus 285 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~ 362 (498)
T 4f3x_A 285 EAVVNGIRTFGYYNAGQDCTAACRIYAEAG-IY-EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAA 362 (498)
T ss_dssp HHHHHHHHHHTTGGGGCSTTCEEEEEEETT-TH-HHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCccCCceEEecHH-HH-HHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHH
Confidence 98777766533222 233344444332 43 7777777766665420 12222222
Q ss_pred hC---------------------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH--
Q 011411 350 GH---------------------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE-- 383 (486)
Q Consensus 350 ~~---------------------------------------g---~iivv~~l~eai~~aN~~APEH--Lel~~~~p~-- 383 (486)
+. | .|+-++|+|||++++|.. +-- ..|.++|..
T Consensus 363 ~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~GL~a~v~t~d~~~a 441 (498)
T 4f3x_A 363 DQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDS-DYGLASSVWTKDISKA 441 (498)
T ss_dssp HSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSS-SCCSEEEEECSBHHHH
T ss_pred HCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcC-CCCceEEEECCCHHHH
Confidence 21 1 234578999999999984 333 346677764
Q ss_pred -HHHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEE
Q 011411 384 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 384 -~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~SgLsV~dFlK~~s~~ 440 (486)
.+..++ .+|.|++..++... .-+|-+| ..|..+..+++.|+..-++.
T Consensus 442 ~~~a~~l-~aG~V~vN~~~~~~---------~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~ 494 (498)
T 4f3x_A 442 MRAASRL-QYGCTWINTHFMLT---------NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIM 494 (498)
T ss_dssp HHHHHHC-CSSEEEESCCSCCC---------TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHhC-CcceEEEcCCCCCC---------CCCCcCCcCcCCcCccchHHHHHHhhceEEEE
Confidence 566777 59999999765422 3355554 45666667788888766653
No 31
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=95.80 E-value=2.3 Score=44.58 Aligned_cols=320 Identities=15% Similarity=0.108 Sum_probs=170.4
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCCceE
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAETSV 151 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~--Q~~~~~~~ 151 (486)
.+-.+..+.+-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|.+. ........
T Consensus 64 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~ 126 (490)
T 3ju8_A 64 EQRIELLERFAATLKSRADELARVIGEETGKP-----------------LWESATEVTSMVNKVAISVQAFRERTGEKSG 126 (490)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 34445566666777777766555555544321 001112244455555544322 11222222
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHHHcCCcc-
Q 011411 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH- 226 (486)
Q Consensus 152 ~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~l~Gv~e- 226 (486)
...++ ....++.|+.-|++..|.- +|+ ++.+.-.+||-.||+.=| +-|.. ..|. +......+|+.+
T Consensus 127 ~~~~~-~~~~~~~P~GVv~~I~PwN-~P~-~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~aGlP~g 197 (490)
T 3ju8_A 127 PLADA-TAVLRHKPHGVVAVFGPYN-FPG-HLPNGHIVPALLAGNCVV--FKPSE----LTPKVAELTLKAWIQAGLPAG 197 (490)
T ss_dssp EETTE-EEEEEEEECSEEEEECCSS-STT-HHHHHHHHHHHHHTCEEE--EECCT----TCHHHHHHHHHHHHHTTCCTT
T ss_pred cCCCC-eeeEEECCCCEEEEECCCc-chH-HHHHHHHHHHHHcCCeEE--EECCC----CCcHHHHHHHHHHHHhCcCcC
Confidence 22233 3345589999999999963 443 566677889999997543 44432 3443 223455667642
Q ss_pred hhh--cchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHH-HHhcCCCCcc-cccCCCCCcEEEEEecCCCCHHHHHHhh
Q 011411 227 ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQNSEAMI-SIDMPAGPSEVLVIADIYASPVHIAADL 302 (486)
Q Consensus 227 Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AK-r~v~~~~~~V-gID~~AGPSEvlIIAD~sAnp~~vAaDL 302 (486)
++. -||...-.+|.- -|+||+|.=-|..=|-.+= +..+...-.| ... +-|-+= +|-|++||.+..|..+
T Consensus 198 vv~vv~g~~~~~~~L~~----~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lE-lGGk~p--~iV~~dADl~~Aa~~i 270 (490)
T 3ju8_A 198 VLNLVQGGRETGVALAA----HRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALE-MGGNNP--LVVEEVADLDAAVYTI 270 (490)
T ss_dssp TEEECCCSHHHHHHHHT----CTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEE-CCCCEE--EEECCCSCHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHh----CCCcCEEEEECcHHHHHHHHHHhhccCCCcEEee-cCCCCe--EEECCCCCHHHHHHHH
Confidence 222 356666666652 5889999877765443221 1111100001 111 224443 4456679999888777
Q ss_pred hhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC-----c------------------HHHHHHHHhCC---
Q 011411 303 LSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-----R------------------GEFASKALGHS--- 352 (486)
Q Consensus 303 LaQAEH----dp~a~avLvT~s~~la~~~V~~~i~~ql~~l~-----r------------------~~ia~~sl~~g--- 352 (486)
+.-+=. .-.+...++....... ++..+.+.+.++.+. . .+.++.+.+.|
T Consensus 271 ~~~~~~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~ 349 (490)
T 3ju8_A 271 IQSAFISAGQRCTCARRLLVPQGAWG-DALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQP 349 (490)
T ss_dssp HHHHHGGGGCSTTSEEEEEEESSHHH-HHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhcCCCCCcCCCEEEEECCccH-HHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEE
Confidence 643322 2233333444333222 555555555554441 0 12333333211
Q ss_pred -------------------------------------eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHHhhccc
Q 011411 353 -------------------------------------FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWESIIEN 391 (486)
Q Consensus 353 -------------------------------------~iivv~~l~eai~~aN~~AP-EHLel~~~~p~---~~l~~I~n 391 (486)
.|+.++|+|||++++|..-- --..|.++|.. .+..++ .
T Consensus 350 ~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~ 428 (490)
T 3ju8_A 350 LLAMTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVES-R 428 (490)
T ss_dssp EECCCCCSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHC-C
T ss_pred EECCCccCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhc-C
Confidence 23457899999999998421 23456777864 455565 5
Q ss_pred cceeccCCCCCccccccccCCCCCCCCCCccccccCCcccccceee
Q 011411 392 AGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYM 437 (486)
Q Consensus 392 AGsIFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~SgLsV~dFlK~~ 437 (486)
+|.|++..++. +.+.-+|-+|. +.++--+++.|+..-
T Consensus 429 aG~v~vN~~~~--------~~~~~~PfGG~-~~SG~~~~~~~~~~k 465 (490)
T 3ju8_A 429 AGIVNWNKQLT--------GAASSAPFGGI-GASGNHRPSAYYAAD 465 (490)
T ss_dssp SSEEEESSCSS--------CCCTTSEECCC-GGGBSSCCEETTHHH
T ss_pred cceEEECCCcC--------CCCCCCCcCCc-cccchhHHHhhheeE
Confidence 89999997654 23355788774 444544566665433
No 32
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=95.78 E-value=1.1 Score=47.24 Aligned_cols=327 Identities=20% Similarity=0.213 Sum_probs=181.0
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCce
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETS 150 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~-~~~~ 150 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+- +.-...|+ ....+.++..++..++++..+.. ...
T Consensus 70 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~ev------~~~~~~~~~~a~~~~~~~~~~~~~~~~- 138 (503)
T 3iwj_A 70 SGAVRARYLRAIAAKVTEKKPELAKLESIDCGKP----LDEAAWDI------DDVAGCFEYYADLAEKLDARQKAPVSL- 138 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHHHHH------HHHHHHHHHHHHHHHHHHHHTTEEECC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHHHHHH------HHHHHHHHHHHHHHHHhcCCccccccc-
Confidence 3444556677788888888877666566655431 11010111 13445566666666666654421 111
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCCch-HhhhcccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCcc-h
Q 011411 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH-I 227 (486)
Q Consensus 151 ~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~-iLaAA~l~Gv~e-I 227 (486)
..++...-.++.|+.-|++..|.- ||- ..+.-.+||-.||+.=|+ -|.. .-..... +......+|..+ +
T Consensus 139 --~~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~~aGlP~gv 210 (503)
T 3iwj_A 139 --PMDTFKSHVLREPIGVVGLITPWN---YPMLMATWKVAPALAAGCAAIL--KPSE-LASLTCLELGEICKEVGLPPGV 210 (503)
T ss_dssp --SCTTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEE--ECCT-TSCHHHHHHHHHHHHHTCCTTS
T ss_pred --cCCCccceEEEcCCceEEEECCCc---hHHHHHHHHHHHHHhcCCeEEE--ECCC-cchHHHHHHHHHHHHhCcCcCe
Confidence 113555667889999999999963 553 344567899999975444 3432 1111112 223445566542 2
Q ss_pred hh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011411 228 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 298 (486)
Q Consensus 228 y~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~v 298 (486)
+. .| |...-.+|. .-|.||+|.=-|..=| ++|+.+- . |-.. +-|-|= +|-|++||.+..
T Consensus 211 v~vv~g~~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~l~-~----v~lE-lGGk~p--~iV~~dADl~~A 278 (503)
T 3iwj_A 211 LNILTGLGPEAGAPLA----THPDVDKVAFTGSSATGSKIMTAAAQLVK-P----VSLE-LGGKSP--LVVFEDVDLDKA 278 (503)
T ss_dssp EEECCSCHHHHTHHHH----TCTTCCEEEEESCHHHHHHHHHHHGGGTC-C----EEEE-CCCCEE--EEECSSSCHHHH
T ss_pred EEEEeCCcHHHHHHHh----hCCCccEEEEECcHHHHHHHHHHHhcCCC-C----EEEE-CCCCCc--eEEcCCCCHHHH
Confidence 22 24 555555665 2578999976665432 2222110 0 1111 224333 444667899887
Q ss_pred HHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHhC-
Q 011411 299 AADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH- 351 (486)
Q Consensus 299 AaDLLaQAE----Hdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~~- 351 (486)
|..++.-+= .--.|...++.... +. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 279 a~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 356 (503)
T 3iwj_A 279 AEWAIFGCFWTNGQICSATSRLILHES-IA-TEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEG 356 (503)
T ss_dssp HHHHHHHHTGGGGCCTTCEEEEEEETT-TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCcccCCeeEEcHH-HH-HHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCC
Confidence 766654322 22234444444332 43 6666666666654320 0122222211
Q ss_pred ---------------------------------------C---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HH
Q 011411 352 ---------------------------------------S---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KW 385 (486)
Q Consensus 352 ---------------------------------------g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~ 385 (486)
| .|+.++|+|||++++|..- +--..|.++|.. .+
T Consensus 357 a~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 436 (503)
T 3iwj_A 357 ATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERV 436 (503)
T ss_dssp CEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHH
T ss_pred CEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 2 2355789999999999842 223456777864 56
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEEE
Q 011411 386 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 386 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~SgLsV~dFlK~~s~~~ 441 (486)
..++ .+|.|++..+.. .++-+|-+| ..|+.+.-+++.|+..-++..
T Consensus 437 ~~~l-~aG~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~ 487 (503)
T 3iwj_A 437 TKAF-KAGIVWVNCSQP---------CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487 (503)
T ss_dssp HHHC-CSSEEEESSSCC---------CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HHhC-CcceEEEcCCCC---------CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEE
Confidence 6677 499999997532 234467555 456666677888988777554
No 33
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=95.71 E-value=0.37 Score=51.07 Aligned_cols=319 Identities=16% Similarity=0.122 Sum_probs=170.4
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEE
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVE 152 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~-~~~~~ 152 (486)
.+-.+..+.+-+.++++.|+=..-.++..-+ . + .+.+.-+..+++.++.|.+.-.+- ...+.
T Consensus 86 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---------------~-~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~ 148 (515)
T 2d4e_A 86 KERKRYLLRIAELIEKHADELAVMECLDAGQ-V---------------L-RIVRAQVARAAENFAFYAEYAEHAMEDRTF 148 (515)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC-C---------------H-HHHHHHHHHHHHHHHHHHTTGGGTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 3445556666666777766544444444421 1 0 011122566677777665422111 11111
Q ss_pred e-cCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc---
Q 011411 153 N-MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH--- 226 (486)
Q Consensus 153 ~-~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e--- 226 (486)
. .+|...-.++.|+.-|++..|. -|| ...+...+||-.||+.=|+ =|.. .-.... .+....+.+|..+
T Consensus 149 ~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~eaGlP~gvv 222 (515)
T 2d4e_A 149 PVDRDWLYYTVRVPAGPVGIITPW---NAPLMLSTWRIAPALAFGNTVVL--KPAE-WSPFTATKLAEILKEADLPPGVF 222 (515)
T ss_dssp CBTTTEEEEEEEEECCCEEEECCS---SSHHHHHHHHHHHHHHTTCCEEE--ECCT-TSCHHHHHHHHHHHHTTCCTTSE
T ss_pred cCCCCceeEEEEecCCceEEECCC---CchhhhhhhhhhHHHHcCCeeee--cCCC-CcHHHHHHHHHHHHHhCCCcCeE
Confidence 1 3466666789999999999996 367 5566778899999985444 3432 111222 2334445666542
Q ss_pred -hhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHH
Q 011411 227 -ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 299 (486)
Q Consensus 227 -Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~vA 299 (486)
|..-+|...-.+|. .-|+||+|.=-|..=| ++|+.+. .|-.. +-|-+= +|-|++||.+..|
T Consensus 223 ~vv~g~~~~~g~~L~----~~p~vd~I~FTGS~~~G~~I~~~aa~~l~-----~v~lE-LGGk~p--~iV~~dADl~~Aa 290 (515)
T 2d4e_A 223 NLVQGFGEEAGAALV----AHPLVPLLTLTGETETGKIVMRNAADHLK-----RLSPE-LGGKSP--ALVFADADLERAL 290 (515)
T ss_dssp EECCCCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHGGGTC-----EEEEE-CCCCCE--EEECTTSCHHHHH
T ss_pred EEEeCCchHHHHHHH----hCCCcCEEEEeCcHHHHHHHHHHHhhcCC-----ceEec-CCCcCe--EEEcCCCCHHHHH
Confidence 22222444334444 2478999954454332 2221110 01111 224443 4445668998877
Q ss_pred HhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHH----
Q 011411 300 ADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL---- 349 (486)
Q Consensus 300 aDLLaQAE----Hdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl---- 349 (486)
..++.-+= +--.|...++... +.. +++.+.+.+.++.+.- .+.++.+.
T Consensus 291 ~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga 368 (515)
T 2d4e_A 291 DAVVFQIFSFNGERCTASSRLLVEE-KIF-EDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGA 368 (515)
T ss_dssp HHHHHHHHGGGGCSTTCCCEEEEEH-HHH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCCCCeEEEEeh-hHH-HHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCC
Confidence 77664321 1223333333332 243 5565555555544320 01111111
Q ss_pred --------------------------------------h---CC---eEEEeCCHHHHHHHhhhhccccc--eecccCh-
Q 011411 350 --------------------------------------G---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDA- 382 (486)
Q Consensus 350 --------------------------------------~---~g---~iivv~~l~eai~~aN~~APEHL--el~~~~p- 382 (486)
. .| .|+.++|+|||++++|.. +-.| .|.++|.
T Consensus 369 ~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~gL~a~v~t~d~~ 447 (515)
T 2d4e_A 369 RLLVGGERAKTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDT-KYGLAAYVFTRDLE 447 (515)
T ss_dssp EEEECCSBCCBCTTSCBCTTTTCBCCEEEECCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCS-SCCSEEEEECSBHH
T ss_pred EEEeCCccccccccccccCCCceeCCEEEeCCCCChhhhccccCCceEEEeeCCHHHHHHHHhcC-CCCceEEEECCCHH
Confidence 1 12 345578999999999985 3344 4567775
Q ss_pred --HHHHhhccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEE
Q 011411 383 --EKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 383 --~~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~ 440 (486)
..+..++ .+|.|++..++.. +.-+|- +|..|+.|..+++.|+..-++.
T Consensus 448 ~a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~ 502 (515)
T 2d4e_A 448 RAHRLALEL-EAGMVYLNSHNVR---------HLPTPFGGVKGSGDRREGGTYALDFYTDLKTIA 502 (515)
T ss_dssp HHHHHHHHS-CSSEEEESSSCCC---------CTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEE
T ss_pred HHHHHHHhC-CeeEEEECCCCCC---------CCCCCCCCcCCCCCCccchHHHHHHhCceeEEE
Confidence 4566776 5999999976431 122454 4556666666788898766654
No 34
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=95.68 E-value=2.8 Score=44.67 Aligned_cols=323 Identities=15% Similarity=0.094 Sum_probs=177.9
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCCc
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAET 149 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~--Q~~~~~ 149 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|... ......
T Consensus 94 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~ 156 (538)
T 3qan_A 94 NPEERANILVKAAAIIRRRKHEFSAWLVHEAGKP-----------------WKEADADTAEAIDFLEYYARQMIELNRGK 156 (538)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 4445556677777777877776555555544321 011111245555556555433 111111
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHHH----HHHHHHcCC
Q 011411 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV----LYCAKKAGV 224 (486)
Q Consensus 150 ~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i----LaAA~l~Gv 224 (486)
.....+|...-.++.|+.-|++..|. -|| ...+.-++||-.||+.=| +-|.. ..|.+ ..+...+|+
T Consensus 157 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VV--lKps~----~tp~ta~~l~~l~~eaGl 227 (538)
T 3qan_A 157 EILSRPGEQNRYFYTPMGVTVTISPW---NFALAIMVGTAVAPIVTGNTVV--LKPAS----TTPVVAAKFVEVLEDAGL 227 (538)
T ss_dssp CCCCCTTEEEEEEEEECCEEEEECCS---TTTTHHHHHHHHHHHHTTCEEE--EECCT----TSHHHHHHHHHHHHHTTC
T ss_pred eecccCCcceeeecCCCcEEEEECCC---chHHHHHHHHHHHHHHcCCEEE--EECCC----ccHHHHHHHHHHHHHhCC
Confidence 11122466677889999999999996 355 456677889999997544 34432 34432 233455665
Q ss_pred cc-hhhc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHh---cCC------CCcccccCCCCCcEEEEEecC
Q 011411 225 TH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL---QNS------EAMISIDMPAGPSEVLVIADI 291 (486)
Q Consensus 225 ~e-Iy~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v---~~~------~~~VgID~~AGPSEvlIIAD~ 291 (486)
.+ ++.+ | |...-.+|. .-|.||+|.=-|..=|- |++. +.. .-.|- ==+-|-+= +|-|+
T Consensus 228 P~gvv~vv~g~~~~~g~~L~----~~p~v~~I~FTGS~~~G--~~i~~~aa~~~~~~~~lkpv~-lELGGk~p--~IV~~ 298 (538)
T 3qan_A 228 PKGVINYVPGSGAEVGDYLV----DHPKTSLITFTGSKDVG--VRLYERAAVVRPGQNHLKRVI-VEMGGKDT--VVVDR 298 (538)
T ss_dssp CTTSEEECCBCTTTTHHHHH----HCTTEEEEEEESCHHHH--HHHHHHHTSCCTTCCSCCEEE-EECCCCCE--EEECT
T ss_pred CCCeEEEEecCCHHHHHHHH----hCCCcCEEEEECCHHHH--HHHHHHhhhccccccccccEE-EecCCCCc--eEECC
Confidence 42 2221 3 444444443 24889999866654322 2111 100 00010 11223333 34466
Q ss_pred CCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----c------------------HHHH
Q 011411 292 YASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFA 345 (486)
Q Consensus 292 sAnp~~vAaDLLaQAEH----dp~a~avLvT~s~~la~~~V~~~i~~ql~~l~----r------------------~~ia 345 (486)
+||.+..|-.++.-+=. --.|...++.... .. +++.+.+.+.++.+. . ...+
T Consensus 299 dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i 376 (538)
T 3qan_A 299 DADLDLAAESILVSAFGFSGQKCSAGSRAVIHKD-VY-DEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYI 376 (538)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETT-TH-HHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCccCceeEEehH-HH-HHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHH
Confidence 78999877776643222 2233334444332 43 777777777766542 0 1122
Q ss_pred HHHH----------------------------------h---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH
Q 011411 346 SKAL----------------------------------G---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE 383 (486)
Q Consensus 346 ~~sl----------------------------------~---~g---~iivv~~l~eai~~aN~~APEH--Lel~~~~p~ 383 (486)
+.+. . .| .|+.++|+|||++++|.. +-. ..|.++|..
T Consensus 377 ~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~-~~gLaa~v~t~d~~ 455 (538)
T 3qan_A 377 EIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNT-EYGLTGAVITRNRA 455 (538)
T ss_dssp HHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCS-SEESEEEEECSCHH
T ss_pred HHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcC-CCCcEEEEECCCHH
Confidence 2221 1 13 345688999999999984 333 456777864
Q ss_pred ---HHHhhccccceeccC-CCCCccccccccCCCCCCCC-----CCcc-ccccCCcccccceeeeEEE
Q 011411 384 ---KWESIIENAGSVFLG-EWTPESVGDYASGTNHVLPT-----YGYA-RMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 384 ---~~l~~I~nAGsIFlG-~~tp~a~GDY~aGpNHvLPT-----~G~A-R~~SgLsV~dFlK~~s~~~ 441 (486)
.+..++ .+|.|++. .++.. .+.-+|= +|.. |..|.-+++.|+..-++..
T Consensus 456 ~a~~~~~~l-~aG~V~iN~~~~~~--------~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~ 514 (538)
T 3qan_A 456 HIEQAKREF-HVGNLYFNRNCTGA--------IVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSE 514 (538)
T ss_dssp HHHHHHHHC-CCSEEEESSCSCCC--------CTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEE
T ss_pred HHHHHHHhC-CeeEEEEeCCCCCC--------CCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEE
Confidence 466666 59999999 43322 1334554 4455 8888889999998877654
No 35
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=95.66 E-value=0.75 Score=48.81 Aligned_cols=322 Identities=14% Similarity=0.169 Sum_probs=171.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCc
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENV-SELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AET 149 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~-~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~-~~~ 149 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+- +.-.. .| +..+++.++.|...-.. ..-
T Consensus 96 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~~E-------------v~~~~~~~~~~a~~~~~~~g~ 158 (517)
T 2o2p_A 96 NARDRGRLLYRLADVMEQHQEELATIEALDAGAV----YTLALKTH-------------VGMSIQTFRYFAGWCDKIQGA 158 (517)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHHHTT-------------THHHHHHHHHHHHHGGGCCEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----HHHHHHHH-------------HHHHHHHHHHHHHHHHHhcCc
Confidence 3445566677777888888776555555555321 10000 11 33444445544332111 000
Q ss_pred eEEe----cCceEEEEEEEeceeeeEeecCCCCCCchHh-hhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcC
Q 011411 150 SVEN----MKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAG 223 (486)
Q Consensus 150 ~~~~----~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStv-LM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~G 223 (486)
.+.. .++...-.++.|+.-|++..|.- ||-.+ +.-.+||-.||+.=|+ =|.. .-.... .+......+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGNtVVl--Kps~-~tp~ta~~l~~l~~eaG 232 (517)
T 2o2p_A 159 TIPINQARPNRNLTLTKKEPVGVCGIVIPWN---YPLMMLSWKTAACLAAGNTVVI--KPAQ-VTPLTALKFAELTLKAG 232 (517)
T ss_dssp EECCCCCTTSCEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEE--ECCT-TCCHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceEEEEecCCccEEEECCCc---chHHHHHHHHHHHHHcCCEEEE--ECCC-ccHHHHHHHHHHHHHhC
Confidence 1111 23435567789999999999964 55443 4567799999986443 3432 111112 2334455666
Q ss_pred Ccc-hhh--cc-hHHHHHHHhhCCCCCCCceEE--ecCCcH----HHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCC
Q 011411 224 VTH-ILK--AG-GAQAISAMAWGTESCPKVEKI--FGPGNQ----YVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIY 292 (486)
Q Consensus 224 v~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkI--vGPGN~----yVt~A-Kr~v~~~~~~VgID~~AGPSEvlIIAD~s 292 (486)
+.. ++. .| |...-.+|. .-|.||+| +|--.. +-++| +.+- .|-.. +-|-|=+ |-+++
T Consensus 233 lP~gvv~vv~g~g~~~g~~L~----~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk-----~v~lE-LGGk~p~--IV~~d 300 (517)
T 2o2p_A 233 IPKGVVNILPGSGSLVGQRLS----DHPDVRKIGFTGSTEVGKHIMKSCALSNVK-----KVSLE-LGGKSPL--IIFAD 300 (517)
T ss_dssp CCTTSEEECCSCHHHHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHTCC-----EEEEE-CCCCEEE--EECTT
T ss_pred CCcCeEEEEeCCCHHHHHHHH----hCCCCCEEEEECCHHHHHHHHHHhHHhcCC-----eEEEE-CCCcCeE--EECCC
Confidence 542 222 24 665555565 24889999 554221 22333 1111 01111 2355543 44456
Q ss_pred CCHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHH
Q 011411 293 ASPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFAS 346 (486)
Q Consensus 293 Anp~~vAaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~ 346 (486)
||.+..|-.++.-+ =.--.|...++... +.. ++..+.+.+.++.+.- ...++
T Consensus 301 ADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~ 378 (517)
T 2o2p_A 301 CDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE-SIH-NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQ 378 (517)
T ss_dssp SCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEH-HHH-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeH-HHH-HHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHH
Confidence 89988777665422 12233444444433 243 6666666666654420 11222
Q ss_pred HHHhC--------------------------------------C---eEEEeCC--HHHHHHHhhhhc-cccceecccCh
Q 011411 347 KALGH--------------------------------------S---FMVFARD--MLEGISFSNLYA-PEHLIVNVKDA 382 (486)
Q Consensus 347 ~sl~~--------------------------------------g---~iivv~~--l~eai~~aN~~A-PEHLel~~~~p 382 (486)
.+.+. | .|+.++| +|||++++|..- +--..|.++|.
T Consensus 379 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 458 (517)
T 2o2p_A 379 RGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDI 458 (517)
T ss_dssp HHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBH
T ss_pred HHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCH
Confidence 22111 1 2445788 999999999842 22355677786
Q ss_pred H---HHHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011411 383 E---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 383 ~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgLsV~dFlK~~s~~ 440 (486)
. .+..++ .+|.|++..+... +.-+|-+ |..|..+.-+++.|+..-++.
T Consensus 459 ~~a~~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~ 514 (517)
T 2o2p_A 459 NKALYVSDKL-QAGTVFINTYNKT---------DVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514 (517)
T ss_dssp HHHHHHHHHC-CSSEEEESCSSCC---------CTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhc-CEeEEEECCCCCC---------CCCCCcCCcCcCCcCccChHHHHHHhCCceEEE
Confidence 4 566777 5999999975321 1235655 455665666778888776654
No 36
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=95.34 E-value=0.95 Score=52.07 Aligned_cols=285 Identities=18% Similarity=0.172 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHHHHhccC---CCceEEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEE
Q 011411 127 KEAFDVAYNNIYAFHLAQKS---AETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLA 202 (486)
Q Consensus 127 ~~ai~~A~~nI~~Fh~~Q~~---~~~~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~ 202 (486)
+.-+..+++.++.|...-.. .........|.....++.|+.-|++..|.- || ...+..++||-.||+. ||+
T Consensus 608 ~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwN---fPl~i~~~~va~ALAAGNt--VVl 682 (1001)
T 3haz_A 608 LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWN---FPLAIFLGQVTAALMAGNS--VVA 682 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSS---STTHHHHHHHHHHHHTTCE--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCC---ChHHHHHHHHHHHHHcCCE--EEE
Confidence 34466677777776543221 111122345667778899999999999963 55 4555677899999974 444
Q ss_pred cCCCCCCCCCHHH----HHHHHHcCCcc----hhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhc
Q 011411 203 TPPSQDGSICKEV----LYCAKKAGVTH----ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQ 268 (486)
Q Consensus 203 TPP~~~G~i~p~i----LaAA~l~Gv~e----Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~ 268 (486)
-|.. ..|.+ ....+.+|+.+ +..-.|.. -.+|. +-|.||+|.=-|..=|. +|++. +
T Consensus 683 KPse----~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~----~~p~Vd~V~FTGSt~vGr~I~~~aA~~~-~ 752 (1001)
T 3haz_A 683 KPAE----QTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALT----AHPDIAGVVFTGSTEVARSINRALAAKD-G 752 (1001)
T ss_dssp ECCT----TCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHSS-S
T ss_pred ecch----hhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHH----hCCCcCEEEecCCHHHHHHHHHHHhccc-C
Confidence 5542 34432 22334456542 22223544 44443 24889999877775442 22210 0
Q ss_pred CCCCcccccCCCCCcEEEEEecCCCCHHHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC----
Q 011411 269 NSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---- 340 (486)
Q Consensus 269 ~~~~~VgID~~AGPSEvlIIAD~sAnp~~vAaDLLaQAEHd----p~a~avLvT~s~~la~~~V~~~i~~ql~~l~---- 340 (486)
. ..--+=-+-|-+= +|-|++||++.++.+++.-+=.. -.|...|+.. ++.. +++.+.+.+.++.+.
T Consensus 753 ~--l~pv~lElGGknp--~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~-e~i~-d~f~~~L~~~~~~l~vGdp 826 (1001)
T 3haz_A 753 P--IVPLIAETGGINA--MIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQ-EDVA-DRMIEMVAGAARELKIGDP 826 (1001)
T ss_dssp C--CCCEEEECCCCEE--EEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEE-HHHH-HHHHHHHHHHHHTCCBSCT
T ss_pred C--CceEEeecCCcce--EEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeecc-HHHH-HHHHHHHHHHHHhcCCCCc
Confidence 0 0000111234332 45588899999998887544322 2344444443 3454 778887777776653
Q ss_pred -----------c-------HHHHHHHH------------------------------h---CCe---EEEeCC--HHHHH
Q 011411 341 -----------R-------GEFASKAL------------------------------G---HSF---MVFARD--MLEGI 364 (486)
Q Consensus 341 -----------r-------~~ia~~sl------------------------------~---~g~---iivv~~--l~eai 364 (486)
. ...++.+. . .|- |+.++| ++||+
T Consensus 827 ~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v~gg~~~~~G~fv~PTvl~~~~~~~~~eEiFGPVL~V~~~~~~~ldeAI 906 (1001)
T 3haz_A 827 SDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCFVAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVL 906 (1001)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEEECCCCSSSCCCCEEEECSSGGGCCSCCCSSEEEEEEECGGGHHHHH
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHhcCeEeccccCCCCcEEeeEEecCCCHHHHhccccCcEEEEEEeCCCCHHHHH
Confidence 0 11222221 1 121 334564 89999
Q ss_pred HHhhhhcc-ccceecccChH---HHHhhccccceeccCCCCCccccccccCCCCCCCCC-----Ccccc-ccCCcccccc
Q 011411 365 SFSNLYAP-EHLIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARM-YGGVSLDSFL 434 (486)
Q Consensus 365 ~~aN~~AP-EHLel~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~-~SgLsV~dFl 434 (486)
+++|..-- --..|.++|.. .+..++ .+|.|++..++.-+. +..+|-+ |+.+. -|..++..|+
T Consensus 907 ~~aN~t~yGLta~V~T~d~~~a~~~a~~l-~aG~V~VN~~~~~~~-------~~~~PFGG~k~SG~G~~~gG~~gl~~ft 978 (1001)
T 3haz_A 907 RAIERTGYGLTLGVHSRIDDSIEAIIDRV-QVGNIYVNRNMIGAV-------VGVQPFGGNGLSGTGPKAGGPHYLARFA 978 (1001)
T ss_dssp HHHHHTCCCSEEEEECSCHHHHHHHHHHC-CCSEEEESSCSCCCC-------TTTSCBCCCGGGBCCCCBTSTTSGGGGE
T ss_pred HHHHcCCCCceEEEEcCCHHHHHHHHHhC-CeeeEEEeCCCcCCC-------CCCCCCCCcccCcCCCCCCCHHHHHHhc
Confidence 99998532 23456777874 455666 599999998653221 1233433 44533 3446778887
Q ss_pred eeeeEE
Q 011411 435 KYMTVQ 440 (486)
Q Consensus 435 K~~s~~ 440 (486)
..-++.
T Consensus 979 ~~K~v~ 984 (1001)
T 3haz_A 979 TEQTVT 984 (1001)
T ss_dssp EEEEEE
T ss_pred eeeEEE
Confidence 766654
No 37
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=95.31 E-value=3.5 Score=43.44 Aligned_cols=321 Identities=16% Similarity=0.127 Sum_probs=175.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 150 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~-~~~ 150 (486)
...+-.+..+.+.+.++++.|+=..-.++..-+ . + .+.+.-+..+++.++.|.+.-..- .-.
T Consensus 78 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---------------~-~ea~~ev~~~~~~~~~~a~~~~~~~g~~ 140 (503)
T 1a4s_A 78 AGIERSRVMLEAARIIRERRDNIAKLEVINNGK-T---------------I-TEAEYDIDAAWQCIEYYAGLAPTLSGQH 140 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC-C---------------H-HHHHHHHHHHHHHHHHHHHHGGGCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 444556667777777787777655544554321 1 0 011223556666676665432211 111
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-h
Q 011411 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 227 (486)
Q Consensus 151 ~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e-I 227 (486)
+...+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+-|.. .-.... .+....+.+|..+ +
T Consensus 141 ~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~ta~~l~~l~~~aGlP~gv 214 (503)
T 1a4s_A 141 IQLPGGAFAYTRREPLGVCAGILAW---NYPFMIAAWKCAPALACGNA--VVFKPSP-MTPVTGVILAEIFHEAGVPVGL 214 (503)
T ss_dssp EECGGGCEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHTTCCTTS
T ss_pred ccCCCCceeEEEEecCceEEEECCC---cchHHHHHHHHHHHHHcCCE--EEEECCC-CChHHHHHHHHHHHHhCCCcCe
Confidence 1222344556788999999999996 356 3445578899999985 4444542 111122 2234445566542 2
Q ss_pred hh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011411 228 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 298 (486)
Q Consensus 228 y~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~v 298 (486)
+. -| | ..-.+|. .-|.||+|.=-|..=| ++|+.+- .|-.. +-|-|= +|-|++||.+..
T Consensus 215 v~vv~g~~-~~g~~L~----~~p~v~~V~FTGS~~~G~~i~~~aa~~~~-----~v~lE-LGGk~p--~IV~~dADl~~A 281 (503)
T 1a4s_A 215 VNVVQGGA-ETGSLLC----HHPNVAKVSFTGSVPTGKKVMEMSAKTVK-----HVTLE-LGGKSP--LLIFKDCELENA 281 (503)
T ss_dssp EEECCCSH-HHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCCE--EEECTTSCHHHH
T ss_pred EEEEecCc-hHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHhhhcCC-----ceEEe-cCCcCe--EEECCCCCHHHH
Confidence 22 24 5 4444554 2488999944443221 2222111 01111 235554 444566899888
Q ss_pred HHhhhhccCcC----CCCc-eEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHH---
Q 011411 299 AADLLSQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA--- 348 (486)
Q Consensus 299 AaDLLaQAEHd----p~a~-avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~s--- 348 (486)
|-.++.-+=.. -.|. -+||-.+ .. ++..+.+.+.++.+.- ...++.+
T Consensus 282 a~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 358 (503)
T 1a4s_A 282 VRGALMANFLTQGQVCTNGTRVFVQRE--IM-PQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHTTCGGGGCCTTCCCEEEEEGG--GH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcCCcEEEEehH--HH-HHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 77776533222 2233 3444333 33 6666666555554420 0111111
Q ss_pred --------------------------------------Hh---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH
Q 011411 349 --------------------------------------LG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE 383 (486)
Q Consensus 349 --------------------------------------l~---~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~ 383 (486)
+. .| .|+.++|+|||++++|..- +--..|.++|..
T Consensus 359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (503)
T 1a4s_A 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 11 12 3455789999999999852 223556777774
Q ss_pred ---HHHhhccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011411 384 ---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 384 ---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
.+..++ .+|.|++..++.. +..+|- +|..|..|..+++.|+..-++..
T Consensus 439 ~a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 494 (503)
T 1a4s_A 439 RAHRVAANL-EAGTCYINTYSIS---------PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494 (503)
T ss_dssp HHHHHHHHS-CSSEEEESCCCCC---------CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEE
T ss_pred HHHHHHHHC-ceeEEEECCCCCC---------CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEE
Confidence 466777 5999999976541 122454 45677888888999988877653
No 38
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=95.00 E-value=3.4 Score=43.52 Aligned_cols=315 Identities=15% Similarity=0.146 Sum_probs=162.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHhccCCCce
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVK-EAFDVAYNNIYAFHLAQKSAETS 150 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~-~ai~~A~~nI~~Fh~~Q~~~~~~ 150 (486)
...+-.+..+++-+.++++.|+=..-.++..-+- + .+.+ .-+..+++.++.|.+......+.
T Consensus 83 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~-------------~~a~~~ev~~~~~~~~~~a~~~~~~~~~ 145 (497)
T 3i44_A 83 SPHERLGFVEKILEIYEKRSSDMAKTISMEMGAP----I-------------DMALNAQTATGSSHIRNFIKAYKEFSFQ 145 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H-------------HHHHHTHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----H-------------HHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 3445556677777777777776555555544321 0 1111 12444455555554332211222
Q ss_pred EEecCceEEEEE-EEeceeeeEeecCCCCCCch-HhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc--
Q 011411 151 VENMKGVRCKRV-ARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-- 225 (486)
Q Consensus 151 ~~~~~Gv~lGqr-~~Pi~rvG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~-- 225 (486)
....+|...-.+ +.|+.-|++..|. -||- ..+.-.+||-.||+.= |+-|.. .-.... .+......+|+.
T Consensus 146 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~V--VlKps~-~tp~t~~~l~~l~~eaGlP~g 219 (497)
T 3i44_A 146 EALIEGNEQAILHYDAIGVVGLITPW---NWPMNQVTLKVIPALLAGCTM--VLKPSE-IAPLSAMLFAEILDEAALPSG 219 (497)
T ss_dssp EESSTTCSSCEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHHTCEE--EEECCT-TSCHHHHHHHHHHHHTTCCTT
T ss_pred ccccCCceeEEEeecCceEEEEECCC---cchHHHHHHHHHHHHHcCCEE--EEECCc-ccHHHHHHHHHHHHHhCcCCC
Confidence 221123322234 8999999999996 3553 4446678999999763 344542 111111 222345566653
Q ss_pred --chhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHH---HHHhcCCCCcccccCCCCCcEEEEEecCCCC
Q 011411 226 --HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAA---KMILQNSEAMISIDMPAGPSEVLVIADIYAS 294 (486)
Q Consensus 226 --eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~A---Kr~v~~~~~~VgID~~AGPSEvlIIAD~sAn 294 (486)
.|..-.|...-.+|.- -|.||+|.=-|..=| ++| |++.. -+-|-|=++ -|++||
T Consensus 220 vvnvv~g~~~~~g~~L~~----hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~l---------ElGGk~p~I--V~~dAD 284 (497)
T 3i44_A 220 VFNLINGDGANVGSYLSA----HPDLEMISFTGSTRAGKDISKNASNTLKRVCL---------ELGGKGANI--IFADAD 284 (497)
T ss_dssp SEEECCCCTTTHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHTTTCEEEE---------ECCCCCEEE--ECTTSC
T ss_pred eEEEEeCCChHHHHHHHh----CCCcCEEEEeCcHHHHHHHHHHHhhcCCceee---------ccCCCCceE--ECCChh
Confidence 2222225555555552 488999987774322 222 22211 123444343 345577
Q ss_pred HHHHHHhhhhc----cCcCCCCce-EEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHH
Q 011411 295 PVHIAADLLSQ----AEHGPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASK 347 (486)
Q Consensus 295 p~~vAaDLLaQ----AEHdp~a~a-vLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~ 347 (486)
+..|..++.- +=..-.|.. +||-.+ +. +++.+.+.+.++.+.- .+.++.
T Consensus 285 -~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~ 360 (497)
T 3i44_A 285 -IDALQRGVRHCFYNSGQSCNAPTRMLVEQA--IY-DKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQS 360 (497)
T ss_dssp -TTHHHHHHHHHHGGGGCCTTCCCEEEEEGG--GH-HHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhcCCCCcccCCEEEEcHH--HH-HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHH
Confidence 6555444432 222223333 444332 33 6666655555543320 112222
Q ss_pred HHh-----------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccCh
Q 011411 348 ALG-----------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDA 382 (486)
Q Consensus 348 sl~-----------------------------------------~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p 382 (486)
+.+ .| .|+.++|+|||++++|..- +=-..|.++|.
T Consensus 361 a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 440 (497)
T 3i44_A 361 GIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDR 440 (497)
T ss_dssp HHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCH
T ss_pred HHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 211 12 3455789999999999842 12345667786
Q ss_pred H---HHHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeE
Q 011411 383 E---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 439 (486)
Q Consensus 383 ~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~SgLsV~dFlK~~s~ 439 (486)
. .+..+++ +|.|++.. .. .+ .-+|-+| ..|..+..+++.|+..-++
T Consensus 441 ~~a~~~a~~l~-aG~V~iN~-~~-------~~--~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v 494 (497)
T 3i44_A 441 SKCRRIAAQVR-SGMVEVNG-HE-------LP--GGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494 (497)
T ss_dssp HHHHHHHHHSC-CSEEEETT-CC-------CC--TTCCBCCSGGGCCCCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHHHhCC-cCeEEECC-CC-------CC--CCCCcCCcCcCcCCccchHHHHHHhcceeEE
Confidence 4 5667774 99999993 11 11 2256554 4566666677788766554
No 39
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=94.83 E-value=1.1 Score=47.11 Aligned_cols=261 Identities=15% Similarity=0.137 Sum_probs=138.8
Q ss_pred EEEEEEeceeeeEeecCCCCCCchH-hhhcccceeecCCCeEEEEcCCCCCCCCCHHH-HHHH-------HHcCCc-chh
Q 011411 159 CKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCA-------KKAGVT-HIL 228 (486)
Q Consensus 159 lGqr~~Pi~rvG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i-LaAA-------~l~Gv~-eIy 228 (486)
.-.++.|+.-|++..|.- +|+--+ +...++||-.||+.=|+ =|.. ..|.+ +.-+ ..+|+. .++
T Consensus 130 ~~~~~~P~GVv~~I~PwN-~P~~~~~~~~~~~~ALaaGN~VVl--Kps~----~tp~t~~~l~~l~~~al~~aGlP~gvv 202 (510)
T 1ez0_A 130 IRRQQIALGPVAVFGASN-FPLAFSAAGGDTASALAAGCPVIV--KGHT----AHPGTSQIVAECIEQALKQEQLPQAIF 202 (510)
T ss_dssp EEEEEEECSCEEEECCSS-CTTTTSTTSHHHHHHHHHTCCEEE--ECCT----TCHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ceEEEecCcEEEEECCcc-chhhhhhhHHHHHHHHHcCCEEEE--ECCC----CchHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 346789999999999963 444333 24678999999987554 3432 34432 1222 335764 233
Q ss_pred hc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHH--H
Q 011411 229 KA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV--H 297 (486)
Q Consensus 229 ~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~--~ 297 (486)
.+ | |...-.+|.= -|.||+|.=-|..=| ++|+++-.. .|... +-|-|=++| |++||.+ .
T Consensus 203 ~vv~g~~~~~g~~L~~----~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~---pv~lE-LGGk~p~iV--~~dADl~~~~ 272 (510)
T 1ez0_A 203 TLLQGNQRALGQALVS----HPEIKAVGFTGSVGGGRALFNLAHERPEPI---PFYGE-LGAINPTFI--FPSAMRAKAD 272 (510)
T ss_dssp EEECCSCTHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHHSSSCC---CEEEE-CCCCCEEEE--CHHHHHHCTT
T ss_pred EEEeCCcHHHHHHHHc----CCCCCEEEEeCcHHHHHHHHHHhhccCCCc---cEEEE-CCCCCeEEE--eCCCCccHHH
Confidence 32 4 5554455542 478999984444322 223221000 02111 235554444 4446776 5
Q ss_pred HHHhhhhccCc----CCCCce-EEEecCchhhHHHHHHHHHHHHhcCC-----c-------HHHHHHHH-----------
Q 011411 298 IAADLLSQAEH----GPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLP-----R-------GEFASKAL----------- 349 (486)
Q Consensus 298 vAaDLLaQAEH----dp~a~a-vLvT~s~~la~~~V~~~i~~ql~~l~-----r-------~~ia~~sl----------- 349 (486)
.|-.++.-+=. --.|.. ++|-.+ ... ++..+.+.+.++.+. . .+.++.++
T Consensus 273 aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-~i~-d~f~~~l~~~~~~~~~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg 350 (510)
T 1ez0_A 273 LADQFVASMTMGCGQFCTKPGVVFALNT-PET-QAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQ 350 (510)
T ss_dssp HHHHHHHHHTGGGGCCTTCCCEEEEESS-HHH-HHHHHHHHHHHHHCCCBCCSSHHHHHHHHHHHHHHHTSTTEEEEECC
T ss_pred HHHHHHHHHHcCCCCCcCCCCEEEEeCC-ccH-HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 55444433222 223333 444443 232 555555555444432 0 01122222
Q ss_pred ------------------------h---CC---eEEEeCCHHHHHHHhhhhccccc--eecccCh-----HHHHhhcc-c
Q 011411 350 ------------------------G---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDA-----EKWESIIE-N 391 (486)
Q Consensus 350 ------------------------~---~g---~iivv~~l~eai~~aN~~APEHL--el~~~~p-----~~~l~~I~-n 391 (486)
. .| .|+.++|+|||++++|.. +-.| .|.++|. ..++.+++ .
T Consensus 351 ~~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~-~~gLaa~v~t~d~~~~~a~~~~~~l~~~ 429 (510)
T 1ez0_A 351 AESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML-AGSLTATIHATEEDYPQVSQLIPRLEEI 429 (510)
T ss_dssp CCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC-CCEEEEEEECCGGGHHHHHHHHHHHHTT
T ss_pred CCCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC-CCCeEEEEEccCcCHHHHHHHHHHHhhc
Confidence 1 12 234578999999999996 4455 4667764 45777775 8
Q ss_pred cceeccCCCCCcc-ccccccCCCCCCC--CCCcccc--ccCCcccccceeeeEEEe
Q 011411 392 AGSVFLGEWTPES-VGDYASGTNHVLP--TYGYARM--YGGVSLDSFLKYMTVQSL 442 (486)
Q Consensus 392 AGsIFlG~~tp~a-~GDY~aGpNHvLP--T~G~AR~--~SgLsV~dFlK~~s~~~~ 442 (486)
+|.|++..++... +.+ +..|-.| -+|..|. .|..+++.|++..+++..
T Consensus 430 aG~V~iN~~~~~~~~~~---~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~~~ 482 (510)
T 1ez0_A 430 AGRLVFNGWPTGVEVGY---AMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQAL 482 (510)
T ss_dssp EEEEEESSCSSCCCCSS---SCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEESC
T ss_pred ccEEEECCCCccCccCC---CCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEcCC
Confidence 9999999754211 111 1222222 1233332 466789999998888875
No 40
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=94.57 E-value=5.4 Score=41.89 Aligned_cols=328 Identities=15% Similarity=0.122 Sum_probs=176.0
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 152 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~~ 152 (486)
..+-.+..+.+-+.++++.|+=..-.++..-+-. .+.+.-+..+++.++.|.+.-..-.-...
T Consensus 55 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~ 117 (486)
T 3pqa_A 55 ITKRYNILMNIAKQIKEKKEELAKILAIDAGKPI-----------------KQARVEVERSIGTFKLAAFYVKEHRDEVI 117 (486)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 3444556777777777777765555555544210 01111244455555544332111000111
Q ss_pred ecCceEEEEEEEeceeeeEeecCCCCCCch-HhhhcccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHc----CCcc
Q 011411 153 NMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKA----GVTH 226 (486)
Q Consensus 153 ~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~-iLaAA~l~----Gv~e 226 (486)
..+|...-.++.|+.-|++..|. -||- ..+.-.+||-.||+.=|+ -|.. .-..... +......+ |+.+
T Consensus 118 ~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~~al~~~GlP~ 191 (486)
T 3pqa_A 118 PSDDRLIFTRREPVGIVGAITPF---NFPLNLSAHKIAPAIATGNVIVH--HPSS-KAPLVCIELAKIIENALKKYNVPL 191 (486)
T ss_dssp CCTTEEEEEEEEECSEEEEEECS---SSHHHHHHHHHHHHHHTTCEEEE--EECT-TSCHHHHHHHHHHHHHHHHTTCCG
T ss_pred cCCCceeEEEEccccEEEEECCC---chHHHHHHHHHHHHHHcCCEEEE--ECCC-CchHHHHHHHHHHHHHHHhcCCCC
Confidence 12355667789999999999996 3664 445567899999975443 3431 1111111 22223334 7653
Q ss_pred -hhhc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCC-CCcccccCCCCCcEEEEEecCCCCHHHHHHh
Q 011411 227 -ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNS-EAMISIDMPAGPSEVLVIADIYASPVHIAAD 301 (486)
Q Consensus 227 -Iy~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~-~~~VgID~~AGPSEvlIIAD~sAnp~~vAaD 301 (486)
++.+ | |...-.+|. .-|+||+|.=-|..=|- |++.... .-.|... +-|-+= +|-|++||.+..|-.
T Consensus 192 gvv~vv~g~~~~~g~~L~----~~p~vd~V~fTGS~~~g--~~i~~~aa~~~v~lE-LGGk~p--~iV~~dADl~~Aa~~ 262 (486)
T 3pqa_A 192 GVYNLLTGAGEVVGDEIV----VNEKVNMISFTGSSKVG--ELITKKAGFKKIALE-LGGVNP--NIVLKDADLNKAVNA 262 (486)
T ss_dssp GGEEECCSCTTTHHHHHH----HCTTCCEEEEESCHHHH--HHHHHHCCSSEEEEE-CCCCEE--EEECTTSCHHHHHHH
T ss_pred CeEEEEeCCchHHHHHHH----hCCCccEEEEECChHHH--HHHHHHcCCCceeec-cCCcCc--EEEcCCCCHHHHHHH
Confidence 3322 3 443334443 24889999877764332 2221100 0001111 124443 444667999988777
Q ss_pred hhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHhCC---
Q 011411 302 LLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGHS--- 352 (486)
Q Consensus 302 LLaQAEH----dp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~~g--- 352 (486)
++.-+=. --.|...++... +.. +++.+.+.+.++.+.- .+.++.+.+.|
T Consensus 263 i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 340 (486)
T 3pqa_A 263 LIKGSFIYAGQVCISVGMILVDE-SIA-DKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKL 340 (486)
T ss_dssp HHHHHHGGGGCSTTSEEEEEEEG-GGH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhcCCCCccCCcEEEEeH-HHH-HHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 6653322 223444444433 353 7777777777665420 12333333222
Q ss_pred ----------------------------------eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHHhhccccce
Q 011411 353 ----------------------------------FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWESIIENAGS 394 (486)
Q Consensus 353 ----------------------------------~iivv~~l~eai~~aN~~AP-EHLel~~~~p~---~~l~~I~nAGs 394 (486)
.|+.++| |||++++|..-- =-..|.++|.. .+..++ .+|.
T Consensus 341 ~~gG~~~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~ 418 (486)
T 3pqa_A 341 LLGGKRDKALFYPTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENL-EFGG 418 (486)
T ss_dssp EECCCEETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHS-CSSE
T ss_pred EecCCCCCcEeccEEEeCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC-Ccce
Confidence 1345778 999999998522 22456677764 566677 4899
Q ss_pred eccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEEEeCH
Q 011411 395 VFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQSLTE 444 (486)
Q Consensus 395 IFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgLsV~dFlK~~s~~~~s~ 444 (486)
|++..++... ..-+|-+ |..|..+..+++.|+..-++..-..
T Consensus 419 v~vN~~~~~~--------~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 419 VVINDSSLFR--------QDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp EEESSCTTCC--------CTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred EEEeCCCCcC--------CCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 9999865411 1135544 4567777788899998877654433
No 41
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=94.53 E-value=4.7 Score=42.44 Aligned_cols=317 Identities=17% Similarity=0.143 Sum_probs=173.1
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceEE
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSVE 152 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~-~~~~~~ 152 (486)
.+-.+..+++-+.++++.|+=..-.++..-+ ++. ++ ..+-+..+++.++-|...-.. ......
T Consensus 66 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk----~~~-------ea-----~~~~v~~~~~~~~~~a~~~~~~~~~~~~ 129 (490)
T 2wme_A 66 MQRSRILRRAVDILRERNDELAALETLDTGK----PLA-------ET-----RSVDIVTGADVLEYYAGLVPAIEGEQIP 129 (490)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC----CHH-------HH-----TTTHHHHHHHHHHHHHHHGGGCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC----CHH-------HH-----HHHHHHHHHHHHHHHHhccccccCcccc
Confidence 3445556677777777777544444443321 110 00 011244555666655442221 122333
Q ss_pred ecCceEEEEEEEeceeeeEeecCCCCCCchH-hhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHHHcCCcc-
Q 011411 153 NMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH- 226 (486)
Q Consensus 153 ~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~l~Gv~e- 226 (486)
..++...-.++.|+.-|++..|. -||-. .+.-.+||-.||+. ||+=|.. ..|. +......+|+-+
T Consensus 130 ~~~~~~~~~~~~P~GVv~~I~Pw---NfP~~~~~~~~a~ALaaGNt--VVlKPse----~tp~ta~~l~~l~~eaGlP~g 200 (490)
T 2wme_A 130 LRETSFVYTRREPLGVVAGIGAW---NYPVQIALWKSAPALAAGNA--MIFKPSE----VTPLTALKLAEIYTEAGVPDG 200 (490)
T ss_dssp EETTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT----TSCHHHHHHHHHHHHHTCCTT
T ss_pred ccCCcceeEEecceeEEEEeccc---cCcchhhhhhHHHHHHcCCe--EEEECCc----CCHHHHHHHHHHHHHhCCCCC
Confidence 44566667788999999999996 36644 44567899999986 3444542 2332 223445566643
Q ss_pred hhhc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHH-----H-HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011411 227 ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV-----T-AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (486)
Q Consensus 227 Iy~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yV-----t-~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~ 297 (486)
++.+ | |.+.-.+|. .-|.||+|.=-|..=| . +|.+-+-. |... +-|=+= +|-|++||.+.
T Consensus 201 v~~vv~g~g~~~g~~L~----~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~----v~lE-LGGk~p--~iV~~dAdl~~ 269 (490)
T 2wme_A 201 VFNVLTGSGREVGQWLT----EHPLIEKISFTGGTSTGKKVMASASSSSLKE----VTME-LGGKSP--LIIFPDADLDR 269 (490)
T ss_dssp SEEECCSCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHHCCE----EEEE-CCCCCE--EEECTTSCHHH
T ss_pred cEEEEeCChHHHHHHHH----hCCCCCEEEEECChHHHHHHHHhhhccCCce----EEEE-cCCcCe--EEEccCccHHH
Confidence 3322 3 555555554 2588999974444322 1 22221100 1110 113232 44577899999
Q ss_pred HHHhhhhccCcC----CCCce-EEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHh
Q 011411 298 IAADLLSQAEHG----PDSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG 350 (486)
Q Consensus 298 vAaDLLaQAEHd----p~a~a-vLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~ 350 (486)
.+..++.-+=.. -.|.. ++|-.+ +. +++.+.+.+.++.+.- ...++.+.+
T Consensus 270 A~~~~~~~~~~n~GQ~C~a~~rv~V~~~--i~-d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 346 (490)
T 2wme_A 270 AADIAVMANFFSSGQVCTNGTRVFIHRS--QQ-ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKA 346 (490)
T ss_dssp HHHHHHHHHHGGGGCCTTCCCEEEEEGG--GH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcCCCceeeccchh--HH-HHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHh
Confidence 887776433211 12333 444333 43 6677777666655420 111222221
Q ss_pred ------------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH-
Q 011411 351 ------------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE- 383 (486)
Q Consensus 351 ------------------------------------------~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~- 383 (486)
.| .|+.++|+|||++++|.-- +=-..|.++|..
T Consensus 347 ~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~ 426 (490)
T 2wme_A 347 QKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLAR 426 (490)
T ss_dssp TTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred cCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHH
Confidence 13 3456899999999999731 123467788764
Q ss_pred --HHHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeE
Q 011411 384 --KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 439 (486)
Q Consensus 384 --~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~SgLsV~dFlK~~s~ 439 (486)
.+..+|+ +|.|++..+... +.-+|-+| +.|+.|.-+++.|+..-++
T Consensus 427 a~~~~~~l~-aG~v~iN~~~~~---------~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v 479 (490)
T 2wme_A 427 AHRAIHRLE-AGICWINTWGES---------PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479 (490)
T ss_dssp HHHHHHHSC-CSEEEESCCSCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHHCC-eeEEEEeCCCCC---------CCCCCcccccccccCchhHHHHHHHhhceeEE
Confidence 5677775 999999854321 12367654 6777777888899876664
No 42
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=94.52 E-value=5.7 Score=41.96 Aligned_cols=327 Identities=18% Similarity=0.126 Sum_probs=175.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc-e
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET-S 150 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~-~ 150 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|.+.-..-.. .
T Consensus 69 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~ev~~~~~~l~~~a~~~~~~~~~~ 131 (506)
T 3rh9_A 69 PIETRRKWLEDIRDGLKENREEIGRILCMEHGKP-----------------WKEAQGEVDYAAGFFDYCAKHISALDSHT 131 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHGGGGCCEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3445566677777888888777655555554421 011122355666666655443211000 1
Q ss_pred EEecCceEEEEEE-EeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCcc-
Q 011411 151 VENMKGVRCKRVA-RSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH- 226 (486)
Q Consensus 151 ~~~~~Gv~lGqr~-~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~-iLaAA~l~Gv~e- 226 (486)
....+|...-.++ .|+.-|++..|.- || ...+.-++||-.||+.=|+= |.. .-..... +......+|+..
T Consensus 132 ~~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~eaGlP~g 205 (506)
T 3rh9_A 132 IPEKPKDCTWTVHYRPVGVTGLIVPWN---FPIGMIAKKLSAALAAGCPSVIK--PAS-ETPLTMIAFFSVMDKLDLPDG 205 (506)
T ss_dssp CSCCGGGCEEEEEEEECCSEEEECCSS---STTHHHHHHHHHHHHHTCCEEEE--CCT-TSCHHHHHHHHHHTTTTCCTT
T ss_pred cccCCCceeeEeecccceEEEEECCCc---hHHHHHHHHHHHHHHcCCEEEEE--cCC-ccHHHHHHHHHHHHHhCcChh
Confidence 1111344444455 9999999999963 44 44456688999999865543 432 1111111 222334455542
Q ss_pred hhh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011411 227 ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (486)
Q Consensus 227 Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~ 297 (486)
++. -| |...-.+|.- -|.||+|.=-|..=|- +|+.+- .|-.. +-|-+= +|-|++||.+.
T Consensus 206 vv~vv~g~~~~~g~~L~~----~p~vd~I~FTGS~~vG~~i~~~aa~~l~-----~v~lE-lGGk~p--~iV~~dADl~~ 273 (506)
T 3rh9_A 206 MVNLVMGKASVIGKVLCE----HKDVPMLSFTGSTEVGRKLIVDTAEQVK-----KLALE-LGGNAP--FIVFDDADLEA 273 (506)
T ss_dssp SEEECCSCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHTTTTTC-----EEEEE-CCCCCE--EEECTTSCHHH
T ss_pred hEEEEeCCChHHHHHHHh----CCCCCEEEEECCHHHHHHHHHHhhhcCC-----ceEEe-cCCCCc--eEECCCCCHHH
Confidence 222 24 6666666653 4779999766654331 111110 01111 124443 44456689988
Q ss_pred HHHhhhhccCc----CCCCce-EEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHH-
Q 011411 298 IAADLLSQAEH----GPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL- 349 (486)
Q Consensus 298 vAaDLLaQAEH----dp~a~a-vLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl- 349 (486)
.|..++.-+=. --.|.. +||-.+ .. +++.+.+.+.++.+.- .+.++.+.
T Consensus 274 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 350 (506)
T 3rh9_A 274 AADNLIANKFRGGGQTCVCANRIFVHEK--VA-DAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALD 350 (506)
T ss_dssp HHHHHHHHHHGGGGCSSSSCCEEEEETT--TH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCcEEEEcHH--HH-HHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHH
Confidence 77766542211 223333 444333 43 6666666665555410 01122211
Q ss_pred -----------------------------------h---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---H
Q 011411 350 -----------------------------------G---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---K 384 (486)
Q Consensus 350 -----------------------------------~---~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~ 384 (486)
. .| .|+.++|+|||++++|..- +--..|.++|.. .
T Consensus 351 ~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~ 430 (506)
T 3rh9_A 351 KGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQR 430 (506)
T ss_dssp TTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHH
T ss_pred CCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence 1 12 3456889999999999843 223456777864 5
Q ss_pred HHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEEEeCHHH
Q 011411 385 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQSLTEEG 446 (486)
Q Consensus 385 ~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~SgLsV~dFlK~~s~~~~s~~~ 446 (486)
+..++ .+|.|++..++.. +..+|-+| ..|..|..+++.|+..-++..-....
T Consensus 431 ~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~~~ 487 (506)
T 3rh9_A 431 VAAGL-RFGHVGWNTGTGP---------TPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFAEN 487 (506)
T ss_dssp HHHHC-CCSEEEESCCCCC---------CTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC----
T ss_pred HHHhC-CcceEEEcCCCCC---------CCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCccc
Confidence 66777 4899999986542 12366554 55667777889998877765444333
No 43
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=94.34 E-value=6.1 Score=41.57 Aligned_cols=324 Identities=14% Similarity=0.100 Sum_probs=172.9
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceEE
Q 011411 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSVE 152 (486)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~-~~~~~~ 152 (486)
.+-.+..+.+-+.++++.|+=..-.++..-+ . + .+.+.-+..+++.++.|.+.-.. ....+.
T Consensus 77 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---------------~-~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~ 139 (501)
T 1uxt_A 77 TERLAVLRKAADIIERNLDVFAEVLVMNAGK-P---------------K-SAAVGEVKAAVDRLRLAELDLKKIGGDYIP 139 (501)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC-C---------------H-HHHHHHHHHHHHHHHTGGGGGGGTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC-C---------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 3445556777777777776655444554421 1 0 11112266677777766542211 111122
Q ss_pred e---cC--ceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc
Q 011411 153 N---MK--GVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH 226 (486)
Q Consensus 153 ~---~~--Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e 226 (486)
. .+ +...-.++.|+.-|++..|.- +|+ ...+.-.+||-.||+.=|+ =|.. .-.... .+......+|..+
T Consensus 140 ~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~-~~~~~~~~~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~eaGlP~ 214 (501)
T 1uxt_A 140 GDWTYDTLETEGLVRREPLGVVAAITPFN-YPL-FDAVNKITYSFIYGNAVVV--KPSI-SDPLPAAMAVKALLDAGFPP 214 (501)
T ss_dssp STTSSTTTTEEEEEEEEECSEEEEECCTT-STT-HHHHHHHHHHHHTTCEEEE--ECCT-TSCHHHHHHHHHHHHTTCCT
T ss_pred ccccCCCcCceEEEEEeeccEEEEECCCc-cHH-HHHHHHHHHHHHcCCEEEE--eCCC-CchHHHHHHHHHHHHhCCCc
Confidence 2 22 445667889999999999963 333 5556778899999986444 3432 111111 2334455666642
Q ss_pred -hhhc--chHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhc---CCCCcccccCCCCCcEEEEEecCCCCHHHHHH
Q 011411 227 -ILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQ---NSEAMISIDMPAGPSEVLVIADIYASPVHIAA 300 (486)
Q Consensus 227 -Iy~v--GGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~---~~~~~VgID~~AGPSEvlIIAD~sAnp~~vAa 300 (486)
++.+ |+...-.+|. .-|+||+|.=-|..=| .|++.. .. .|-.. +-|-| -+|-|++||.+..|-
T Consensus 215 gvv~vv~g~~~~g~~L~----~~~~vd~I~FTGS~~~--G~~i~~~aal~--~v~lE-LGGk~--p~iV~~dADl~~Aa~ 283 (501)
T 1uxt_A 215 DAIALLNLPGKEAEKIV----ADDRVAAVSFTGSTEV--GERVVKVGGVK--QYVME-LGGGD--PAIVLEDADLDLAAD 283 (501)
T ss_dssp TSEEECCCCHHHHHHHH----TCTTCCEEEEESCHHH--HHHHHHHHCSS--EEEEE-CCCCE--EEEECTTSCHHHHHH
T ss_pred CeEEEEeCCcHHHHHHH----hCCCcCEEEEeCcHHH--HHHHHHhcCCC--eEEEE-cCCcC--eEEECCCCCHHHHHH
Confidence 2222 4333334444 3488999954444222 122110 00 01111 22445 345566789988777
Q ss_pred hhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHH-------
Q 011411 301 DLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASK------- 347 (486)
Q Consensus 301 DLLaQAE----Hdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~------- 347 (486)
.++.-+= +--.|...++.... .. ++..+.+.+.++.+.- .+.++.
T Consensus 284 ~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~ 361 (501)
T 1uxt_A 284 KIARGIYSYAGQRCDAIKLVLAERP-VY-GKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGR 361 (501)
T ss_dssp HHHHHHHGGGGCSTTCEEEEEEEHH-HH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhcCCCCCCcCCcEEEeccc-hH-HHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 6654322 22234333333322 32 5555555555543320 001111
Q ss_pred -----------------------------HHh---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHHhh
Q 011411 348 -----------------------------ALG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWESI 388 (486)
Q Consensus 348 -----------------------------sl~---~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~l~~ 388 (486)
.+. .| .|+.++|+|||++++|..- +--..|.++|.. .+..+
T Consensus 362 ~~~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 441 (501)
T 1uxt_A 362 VLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRL 441 (501)
T ss_dssp EEECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHH
T ss_pred EEeCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHh
Confidence 111 13 3455789999999999842 223456777875 45666
Q ss_pred ccccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEEE
Q 011411 389 IENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 389 I~nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
+ .+|.|++..+. .. .+.-+| .+|..|..|.-+++.|+..-++..
T Consensus 442 l-~~G~V~iN~~~-~~-------~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 490 (501)
T 1uxt_A 442 L-EVGAIYINDMP-RH-------GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 490 (501)
T ss_dssp C-CSSEEEETSCC-CC-------TTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEE
T ss_pred C-CEeeEEEeCCC-CC-------CCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEE
Confidence 6 59999999752 11 122244 456778888888999998888754
No 44
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=94.26 E-value=6.1 Score=41.24 Aligned_cols=327 Identities=14% Similarity=0.156 Sum_probs=175.1
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 011411 71 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 150 (486)
Q Consensus 71 ~~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~ 150 (486)
....+-.+..+.+-+.++++.|+=..-.++..-+-..+. +. .|+ . ...+-++.++++++++...+......
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~--~ev-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (469)
T 3sza_A 37 RPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNA-YY--EEV-----V-YVLEEIEYMIQKLPEWAADEPVEKTP 107 (469)
T ss_dssp CSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HH--TTH-----H-HHHHHHHHHHHHHHHHHSCEECCCCG
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HH--HHH-----H-HHHHHHHHHHHHHHhhhcccccCccc
Confidence 344455666778888888888876666666664311000 00 111 1 23445677777777776533222111
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHHHH-HHHHH------c
Q 011411 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKK------A 222 (486)
Q Consensus 151 ~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~iL-aAA~l------~ 222 (486)
. ..+...-.++.|+.-|++..|.- || ...+.-.+||-.||+.= |+-|.. ..|.+- .-+++ .
T Consensus 108 -~-~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~v--VlKps~----~tp~t~~~l~~l~~~alP~ 176 (469)
T 3sza_A 108 -Q-TQQDELYIHSEPLGVVLVIGTWN---YPFNLTIQPMVGAIAAGNAV--VLKPSE----LSENMASLLATIIPQYLDK 176 (469)
T ss_dssp -G-GTTSEEEEEEEECSEEEEECCSS---STTHHHHHHHHHHHHTTCEE--EEECCT----TSHHHHHHHHHHHHHHSCT
T ss_pred -c-CCCccceeeccCCCEEEEECCCc---chHHHHHHHHHHHHHcCCEE--EEECCC----CChHHHHHHHHHHHHhCCc
Confidence 1 12334556789999999999963 55 45556678999999743 444542 344321 22222 2
Q ss_pred CCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHH
Q 011411 223 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 296 (486)
Q Consensus 223 Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~ 296 (486)
|+=.|.. ||...+.+|.- . +||+|.=-|..=| ++|+.+. . |-.. +-|-|=+ |-|++||.+
T Consensus 177 gvv~vv~-g~~~~~~~ll~---~--~vd~I~FTGS~~vG~~i~~~aa~~lk-p----v~lE-LGGk~p~--iV~~dADl~ 242 (469)
T 3sza_A 177 DLYPVIN-GGVPETTELLK---E--RFDHILYTGSTGVGKIIMTAAAKHLT-P----VTLE-LGGKSPC--YVDKNCDLD 242 (469)
T ss_dssp TTSCBCC-CSHHHHHHHTT---S--CCSEEEEESCHHHHHHHHHHHHTTTC-C----EEEE-CCCCCEE--EECTTSCHH
T ss_pred ceEEEEE-CCHHHHHHHHh---c--CCCEEEEECCHHHHHHHHHHHhhccC-c----eEEe-cCCCCce--EECCCCCHH
Confidence 3333322 55555666642 2 6999976666432 2232111 0 1111 2244433 445679998
Q ss_pred HHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcC---C-----------cH---HHHHH--------
Q 011411 297 HIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL---P-----------RG---EFASK-------- 347 (486)
Q Consensus 297 ~vAaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l---~-----------r~---~ia~~-------- 347 (486)
..|..++.-+ =.--.|...++... +.. +++.+.+.+.++.+ | .+ +-+++
T Consensus 243 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i~ga~v~ 320 (469)
T 3sza_A 243 VACRRIAWGKFMNSGQTCVAPDYILCDP-SIQ-NQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA 320 (469)
T ss_dssp HHHHHHHHHHHGGGGCCTTSCCEEEECG-GGH-HHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHhcCCCCCCCCcEEEEeh-hHH-HHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHHcCCEEE
Confidence 8776665322 11223333333332 232 55555444444321 1 00 00111
Q ss_pred -------------------------HHh---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHHhhcccc
Q 011411 348 -------------------------ALG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWESIIENA 392 (486)
Q Consensus 348 -------------------------sl~---~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~l~~I~nA 392 (486)
.+. .| .|+.++|+|||++++|..- +--..|.++|.. .+..+++ +
T Consensus 321 ~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~-~ 399 (469)
T 3sza_A 321 YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETS-S 399 (469)
T ss_dssp ECCCEETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCC-C
T ss_pred eCCccCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCC-c
Confidence 011 13 3456799999999999843 334556788864 4566664 8
Q ss_pred ceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011411 393 GSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 393 GsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
|.|++..++.-. .+.-+|- +|..|+.|.-+++.|+..-++..
T Consensus 400 G~V~vN~~~~~~-------~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~ 446 (469)
T 3sza_A 400 GGVAANDVIVHI-------TLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLV 446 (469)
T ss_dssp SEEEESCSSGGG-------SCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEE
T ss_pred ceEEEeCCCCCC-------CCCCCCcCCccccccCccchHHHHHHhhCeeEEEE
Confidence 999999764211 1222343 45667777778888988777654
No 45
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=94.22 E-value=4.6 Score=46.65 Aligned_cols=260 Identities=16% Similarity=0.178 Sum_probs=148.0
Q ss_pred cCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHHHcCCcc-h
Q 011411 154 MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH-I 227 (486)
Q Consensus 154 ~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~l~Gv~e-I 227 (486)
.+|...-.+++|+.-|++..|.- || ...+..++||-.||+. ||+=|.. -.|. +....+.+|+.. +
T Consensus 655 ~~g~~~~~~~~PlGVV~~I~PwN---fPl~i~~~~~a~ALaaGNt--VVlKPse----~tplsa~~l~ell~eAGlP~gv 725 (1026)
T 4f9i_A 655 APGELNHYFYEPKGVAAVIAPWN---FPLAISMGMASAAIVTGNC--VVFKPSG----ITSIIGWHLVELFREAGLPEGV 725 (1026)
T ss_dssp CTTEEEEEEEEECSEEEEECCSS---STTHHHHHHHHHHHHTTCE--EEEECCG----GGHHHHHHHHHHHHHTTCCTTS
T ss_pred CCCccceeEeecCceEEEeCCCc---cHHHHHHHHHHHHHHcCCE--EEEEcCc----cchHHHHHHHHHHHHhCcCCCe
Confidence 45766777899999999999963 54 4445667899999965 4445542 2332 234456677643 3
Q ss_pred hh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcC--CC--C---cc-cccCCCCCcEEEEEecCCCCHH
Q 011411 228 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN--SE--A---MI-SIDMPAGPSEVLVIADIYASPV 296 (486)
Q Consensus 228 y~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~--~~--~---~V-gID~~AGPSEvlIIAD~sAnp~ 296 (486)
+. -| |...-.+|. +-|.||+|.=-|..=|. |++... .. + .. -+==+-|-+ -+|.|++||++
T Consensus 726 vnvV~G~g~~vg~~L~----~hp~v~~V~FTGSt~vg--~~I~~~aa~~~~~~~~lkpv~lElGGkn--p~IV~~dADld 797 (1026)
T 4f9i_A 726 FNFTPGRGSVMGDYLV----DHPDISLIAFTGSMETG--LRIIERAAKVHPGQANVKKIISEMGGKN--AIIIDDDADLD 797 (1026)
T ss_dssp EEECCCCHHHHHHHHH----HCTTEEEEEEESCHHHH--HHHHHHHTSCCTTCCSCCEEEEECCCCE--EEEECTTCCHH
T ss_pred EEEEecCcHHHHHHHH----hCCCCCEEEeCCCHHHH--HHHHHHhhcccccccCccceEEecCCCC--eEEECCCCCHH
Confidence 32 24 555545554 25889999766664332 221110 00 0 00 000011222 35668889999
Q ss_pred HHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHH--
Q 011411 297 HIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA-- 348 (486)
Q Consensus 297 ~vAaDLLaQAEH----dp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~s-- 348 (486)
.+|.+++.-+=. --.|...|+... ++. +++.+.+.+.++.+.- ...++.+
T Consensus 798 ~Aa~~iv~saf~~aGQ~C~A~~rl~V~~-~i~-d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~ 875 (1026)
T 4f9i_A 798 EAVPHVLYSAFGFQGQKCSACSRVIVLD-AVY-DKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKR 875 (1026)
T ss_dssp HHHHHHHHHHHGGGGCSTTCEEEEEEEG-GGH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCceEEecH-HHH-HHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHh
Confidence 999988754322 223444444443 353 7777777766665520 1111111
Q ss_pred --------------------------------Hh---CC---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HH
Q 011411 349 --------------------------------LG---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KW 385 (486)
Q Consensus 349 --------------------------------l~---~g---~iivv~~l~eai~~aN~~APEHL--el~~~~p~---~~ 385 (486)
+. .| .|+.++|+|||++++|.. +-.| .|.+.|.. .+
T Consensus 876 ~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t-~yGLt~~V~t~d~~~a~~~ 954 (1026)
T 4f9i_A 876 EGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANST-QFALTGGIFSRSPEHLAKA 954 (1026)
T ss_dssp HSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCS-SCCSEEEEECCCHHHHHHH
T ss_pred CCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcC-CCCCeEEEECCCHHHHHHH
Confidence 11 13 345678999999999985 4444 46677764 45
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCCCC-----cccc-ccCCcccccceeeeEEE
Q 011411 386 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARM-YGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 386 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~-~SgLsV~dFlK~~s~~~ 441 (486)
..+++ +|.|++...+.-+. ...+|=+| +.+. -|..++..|+..-++..
T Consensus 955 ~~~l~-aG~v~IN~~~~~~~-------~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~ 1008 (1026)
T 4f9i_A 955 RREFR-VGNLYINRNNTGAL-------VERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTE 1008 (1026)
T ss_dssp HHHSC-CSEEEESSCSCCCC-------TTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEE
T ss_pred HHhCC-EeeEEEcCCCCCCC-------CCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEE
Confidence 66665 99999998654322 12345444 3433 34456888887766543
No 46
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=94.19 E-value=6.3 Score=41.10 Aligned_cols=319 Identities=16% Similarity=0.101 Sum_probs=176.6
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE-
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV- 151 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~- 151 (486)
..+-.+..+.+.+.++++-|+=..-.++..-+ . + .+.+.-+..+++.++.|.+. ..+ |.-
T Consensus 65 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---------------~-~ea~~ev~~~~~~l~~~a~~-~~~-~~~~ 125 (479)
T 2imp_A 65 AIERASWLRKISAGIRERASEISALIVEEGGK-I---------------Q-QLAEVEVAFTADYIDYMAEW-ARR-YEGE 125 (479)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC-C---------------H-HHHHHHHHHHHHHHHHHHTT-TTT-CCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---------------H-HHHHHHHHHHHHHHHHHHHH-HHH-hhCC
Confidence 34445566677777777766555545554421 0 0 11122366677777766542 222 211
Q ss_pred --Ee-cCceEEEEEEEeceeeeEeecCCCCCCchH-hhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc
Q 011411 152 --EN-MKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH 226 (486)
Q Consensus 152 --~~-~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e 226 (486)
.. .+|...-.++.|+.-|++..|. -||-. .+.-.+||-.||+.=| +-|.. .-.... .+....+.+|...
T Consensus 126 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~~aGlP~ 199 (479)
T 2imp_A 126 IIQSDRPGENILLFKRALGVTTGILPW---NFPFFLIARKMAPALLTGNTIV--IKPSE-FTPNNAIAFAKIVDEIGLPR 199 (479)
T ss_dssp EECCSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT-TSCHHHHHHHHHHHHHTCCT
T ss_pred ccccCCCCceeEEEEeccceEEEECCC---chHHHHHHHHHHHHHHcCCEEE--EECCc-cchHHHHHHHHHHHHhCCCc
Confidence 11 2465667788999999999996 35643 4457889999998433 34442 111111 2334455666543
Q ss_pred ----hhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHH
Q 011411 227 ----ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 296 (486)
Q Consensus 227 ----Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~ 296 (486)
+..-+|.+.-.+|. +-|+||+|.=-|..-| ++|+.+- .|-.. +-|-|= +|-|++||.+
T Consensus 200 gvv~vv~g~~~~~~~~L~----~~~~v~~V~fTGS~~~g~~i~~~aa~~~~-----~v~lE-lGGk~p--~iV~~dADl~ 267 (479)
T 2imp_A 200 GVFNLVLGRGETVGQELA----GNPKVAMVSMTGSVSAGEKIMATAAKNIT-----KVCLE-LGGKAP--AIVMDDADLE 267 (479)
T ss_dssp TSEEECCSCTTTHHHHHH----HCTTEEEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCCE--EEECTTSCHH
T ss_pred CeEEEEECCcHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHHhccCC-----cEEEE-cCCcCe--EEECCCCCHH
Confidence 22222444344454 2488999984444333 2221110 02111 225553 4446678999
Q ss_pred HHHHhhhhccCcCC----CCc-eEEEecCchhhHHHHHHHHHHHHhcCC----c-------------------HHHHHHH
Q 011411 297 HIAADLLSQAEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----R-------------------GEFASKA 348 (486)
Q Consensus 297 ~vAaDLLaQAEHdp----~a~-avLvT~s~~la~~~V~~~i~~ql~~l~----r-------------------~~ia~~s 348 (486)
..|-.++.-+=... .|. -++|-.+ .. ++..+.+.+.++.+. . .+.++.+
T Consensus 268 ~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a 344 (479)
T 2imp_A 268 LAVKAIVDSRVINSGQVCNCAERVYVQKG--IY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARA 344 (479)
T ss_dssp HHHHHHHTTSSTTTTCCSSSCSEEEEEGG--GH-HHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcCcCCcEEEEehh--hH-HHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHH
Confidence 88888775443322 222 3444333 43 666666666665542 0 0111111
Q ss_pred Hh--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---
Q 011411 349 LG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE--- 383 (486)
Q Consensus 349 l~--------------------------------------~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~--- 383 (486)
.+ .| .++.++|+|||++++|..- +--..|.++|..
T Consensus 345 ~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~ 424 (479)
T 2imp_A 345 VEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAM 424 (479)
T ss_dssp HHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHH
T ss_pred HHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHH
Confidence 10 01 2445789999999999852 233556778865
Q ss_pred HHHhhccccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEEE
Q 011411 384 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 384 ~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~SgLsV~dFlK~~s~~~ 441 (486)
.+..++ .+|.|++..++.. +.-+| .+|..|..|..+++.|+..-++..
T Consensus 425 ~~~~~l-~~G~v~iN~~~~~---------~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 425 KAIKGL-KFGETYINRENFE---------AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHHHC-CSSEEEESSCCCC---------CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhC-CEeEEEECCCCCC---------CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence 466776 5999999976532 12355 456677777778888988777654
No 47
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=94.18 E-value=6.7 Score=41.38 Aligned_cols=323 Identities=15% Similarity=0.131 Sum_probs=173.0
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCCc
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAET 149 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~--Q~~~~~ 149 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+- + . +.+.-+..+++.++.|.+. +.....
T Consensus 94 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~------------~-ea~~ev~~~~~~~~~~a~~~~~~~~~~ 156 (516)
T 1uzb_A 94 PQEDRSRLLLKAAALMRRRKRELEATLVYEVGKN----W------------V-EASADVAEAIDFIEYYARAALRYRYPA 156 (516)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H------------H-HHHHHHHHHHHHHHHHHHHHGGGCSSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----H------------H-HHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4445566677788888888776555555554321 0 0 1111255556666655431 111111
Q ss_pred -eEEecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHHHcC
Q 011411 150 -SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAG 223 (486)
Q Consensus 150 -~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~l~G 223 (486)
.....+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+.= |+=|.. ..|. +......+|
T Consensus 157 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~V--VlKps~----~tp~ta~~l~~l~~eaG 227 (516)
T 1uzb_A 157 VEVVPYPGEDNESFYVPLGAGVVIAPW---NFPVAIFTGMIVGPVAVGNTV--IAKPAE----DAVVVGAKVFEIFHEAG 227 (516)
T ss_dssp CCCCCCTTEEEEEEEEECCEEEEECCS---SSTTHHHHHHHHHHHHTTCEE--EEECCG----GGHHHHHHHHHHHHHHT
T ss_pred ccccCCCCceEEEEEeccceEEEECCC---ccHHHHHHHHHHHHHHcCCeE--EEeCCC----CCHHHHHHHHHHHHHhC
Confidence 11123466667789999999999996 366 45556788999999863 344532 2332 234455566
Q ss_pred Ccc-hhh--cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcC--------CCC-cccccCCCCCcEEEEEec
Q 011411 224 VTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN--------SEA-MISIDMPAGPSEVLVIAD 290 (486)
Q Consensus 224 v~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~--------~~~-~VgID~~AGPSEvlIIAD 290 (486)
... ++. -| |...-.+|. +-|.||+|.=-|..=| .|++... .+. .|-. -+-|-|= +|-|
T Consensus 228 lP~gvv~vv~g~~~~~~~~L~----~~~~v~~I~FTGS~~~--G~~i~~~aa~~~~~~~~~~~v~l-ElGGk~p--~iV~ 298 (516)
T 1uzb_A 228 FPPGVVNFLPGVGEEVGAYLV----EHPRIRFINFTGSLEV--GLKIYEAAGRLAPGQTWFKRAYV-ETGGKNA--IIVD 298 (516)
T ss_dssp CCTTSEEECCCSSSHHHHHHH----TCTTCCEEEEESCHHH--HHHHHHHHTSCCTTCCSCCEEEE-ECCCCEE--EEEC
T ss_pred CCcCeEEEEeCCCchhhhhhh----cCCCcCEEEecCCHHH--HHHHHHHhhhccccccccceeEE-ecCCccc--eeEC
Confidence 542 221 24 555555554 2488999986565322 2222110 000 0111 1234443 4456
Q ss_pred CCCCHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc---------------------HHHH
Q 011411 291 IYASPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------------GEFA 345 (486)
Q Consensus 291 ~sAnp~~vAaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r---------------------~~ia 345 (486)
++||.+..|..++.-+ =.--.|...++... +.. +++.+.+.+.++.+.- ...+
T Consensus 299 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i 376 (516)
T 1uzb_A 299 ETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ-GAY-EPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEH-HHH-HHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCccccCcEEEEch-HHH-HHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHH
Confidence 6789988777665322 12233444444433 243 6666666666654420 0111
Q ss_pred HHH----------------------------------Hh---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH
Q 011411 346 SKA----------------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE 383 (486)
Q Consensus 346 ~~s----------------------------------l~---~g---~iivv~~l~eai~~aN~~APEH--Lel~~~~p~ 383 (486)
+.+ +. .| .|+.++|+|||++++|.. +-. ..|.++|..
T Consensus 377 ~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~-~~gL~a~v~t~d~~ 455 (516)
T 1uzb_A 377 EIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT-PYGLTGGVYSRKRE 455 (516)
T ss_dssp HHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCS-SCCSEEEEECSCHH
T ss_pred HHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcC-CCCceEEEECCCHH
Confidence 111 11 12 345589999999999997 333 456788875
Q ss_pred H---HHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCC-cccccceeeeEE
Q 011411 384 K---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGV-SLDSFLKYMTVQ 440 (486)
Q Consensus 384 ~---~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgL-sV~dFlK~~s~~ 440 (486)
. +..++ .+|.|++..++... .++-+|=+ |..|..+|. +++.|+..-++.
T Consensus 456 ~a~~~~~~l-~aG~v~iN~~~~~~-------~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~ 513 (516)
T 1uzb_A 456 HLEWARREF-HVGNLYFNRKITGA-------LVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513 (516)
T ss_dssp HHHHHHHHS-CCSEEEESSCSCCC-------CTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEE
T ss_pred HHHHHHHhC-CEeEEEEeCCCCCC-------CCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEE
Confidence 4 56666 79999999743221 12235544 445433333 356777766653
No 48
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=93.91 E-value=7 Score=40.67 Aligned_cols=322 Identities=14% Similarity=0.079 Sum_probs=176.0
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceE
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSV 151 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~-~~~~~ 151 (486)
..+-.+..+.+.+.++++.|+=..-.++..-+ . + .+.+.-+..+++.++.|...-.. .....
T Consensus 61 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---~-------------~ea~~ev~~~~~~~~~~a~~~~~~~~~~~ 123 (475)
T 1euh_A 61 YIERAAYLHKVADILMRDKEKIGAILSKEVAK-G---Y-------------KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123 (475)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC-C---H-------------HHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC-C---H-------------HHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 34445667777777777777655444444421 0 0 11223356666777766542211 01111
Q ss_pred Ee-cCc----eEE-EEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHHH
Q 011411 152 EN-MKG----VRC-KRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKK 221 (486)
Q Consensus 152 ~~-~~G----v~l-Gqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~l 221 (486)
.. .+| ... -.++.|+.-|++..|. .+|+ ...+...+||-.||+.=|+ -|.. ..|. +......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~vVl--Kps~----~tp~t~~~l~~ll~~ 195 (475)
T 1euh_A 124 EGGSFEAASKKKIAVVRREPVGLVLAISPF-NYPV-NLAGSKIAPALIAGNVIAF--KPPT----QGSISGLLLAEAFAE 195 (475)
T ss_dssp EGGGTCGGGTTEEEEEEEEECSEEEEECCT-TSTT-HHHHHHHHHHHHTTCEEEE--ECCS----TTHHHHHHHHHHHHH
T ss_pred cCCCCCccccceeeEEEEeccceEEEECCC-CchH-HHHHHHHHHHHHcCCEEEE--eCCC----cChHHHHHHHHHHHH
Confidence 11 245 455 6788999999999996 3332 4556688999999986544 3432 2343 2233445
Q ss_pred cCCcc----hhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCC-CCcccccCCCCCcEEEEEecCCCCHH
Q 011411 222 AGVTH----ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNS-EAMISIDMPAGPSEVLVIADIYASPV 296 (486)
Q Consensus 222 ~Gv~e----Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~-~~~VgID~~AGPSEvlIIAD~sAnp~ 296 (486)
+|... +..-+|.+.-.+|. .-|.||+|.=-|..-| .|++.... .-.|-.. +-|-|= +|-|++||.+
T Consensus 196 aGlP~gvv~vv~g~~~~~~~~L~----~~~~v~~V~fTGS~~~--g~~i~~~aa~~~v~lE-lGGk~p--~iV~~dADl~ 266 (475)
T 1euh_A 196 AGLPAGVFNTITGRGSEIGDYIV----EHQAVNFINFTGSTGI--GERIGKMAGMRPIMLE-LGGKDS--AIVLEDADLE 266 (475)
T ss_dssp HTCCTTTEEECCCCHHHHHHHHH----HCTTCCEEEEESCHHH--HHHHHHHTTTSCEEEE-CCCCEE--EEECTTSCHH
T ss_pred hCCCcCeEEEEeCCcHHHHHHHH----hCCCcCEEEEECchHH--HHHHHHhcCCCcEEEE-cCCcCe--EEECCCCCHH
Confidence 66542 22222554445554 2478999985555322 22221100 0002222 235553 4556678998
Q ss_pred HHHHhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc---------------------HHHHHHHHhC
Q 011411 297 HIAADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------------GEFASKALGH 351 (486)
Q Consensus 297 ~vAaDLLaQ----AEHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r---------------------~~ia~~sl~~ 351 (486)
..|-.++.- +=..-.|...++... +.. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 267 ~aa~~i~~~~~~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~ 344 (475)
T 1euh_A 267 LTAKNIIAGAFGYSGQRCTAVKRVLVME-SVA-DELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDK 344 (475)
T ss_dssp HHHHHHHHHHHGGGGCCSSSEEEEEEEH-HHH-HHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCCCcCCCCcEEEEeh-hHH-HHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHC
Confidence 877766532 222233444444433 243 6666666666654420 1122222110
Q ss_pred -----------------------------------C---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHHhhc
Q 011411 352 -----------------------------------S---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWESII 389 (486)
Q Consensus 352 -----------------------------------g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~l~~I 389 (486)
| .++.++|+|||++++|..- +--..|.++|+. .+..++
T Consensus 345 Ga~~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l 424 (475)
T 1euh_A 345 GATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQL 424 (475)
T ss_dssp TCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHS
T ss_pred CCEEEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhC
Confidence 1 2345789999999999962 123556778874 456666
Q ss_pred cccceeccCC-CCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEE
Q 011411 390 ENAGSVFLGE-WTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 390 ~nAGsIFlG~-~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~ 440 (486)
.+|.|++.. ++.. ++-+|- +|..|..|.-+++.|+..-++.
T Consensus 425 -~~G~v~vN~~~~~~---------~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 471 (475)
T 1euh_A 425 -EVGTVHINNKTQRG---------TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471 (475)
T ss_dssp -CSSEEEESSCCCCC---------STTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred -CEeeEEECCCCCCC---------CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEE
Confidence 589999997 4432 234664 4566777777788888777764
No 49
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=93.18 E-value=9.7 Score=40.00 Aligned_cols=321 Identities=17% Similarity=0.161 Sum_probs=175.1
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--Cc
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA--ET 149 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~--~~ 149 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+- +. .....-+..+++.++.|.+ ...+ .-
T Consensus 68 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~------------ea~~~Ev~~~~~~~~~~a~-~~~~~~g~ 130 (495)
T 3b4w_A 68 PPHERAAVIAAAVKMLAERKDLFTKLLAAETGQP----PT------------IIETMHWMGSMGAMNYFAG-AADKVTWT 130 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HH------------HHHHTTTHHHHHHHHHHHT-CGGGSCSE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----HH------------HHHHHHHHHHHHHHHHHHH-HHHHhcCC
Confidence 4455566778888888888877655556555321 10 0000113445555655543 2211 11
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCCch-HhhhcccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-
Q 011411 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH- 226 (486)
Q Consensus 150 ~~~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p-~iLaAA~l~Gv~e- 226 (486)
.+....+...-.++.|+.-|++..|.- ||- ..+.-.+||-.||+.=|+= |.. .-.... .+......+|..+
T Consensus 131 ~~~~~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~eaGlP~g 204 (495)
T 3b4w_A 131 ETRTGSYGQSIVSREPVGVVGAIVAWN---VPLFLAVNKIAPALLAGCTIVLK--PAA-ETPLTANALAEVFAEVGLPEG 204 (495)
T ss_dssp EEEEETTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEEE--CBT-TSCHHHHHHHHHHHHTTCCTT
T ss_pred cccCCCCceEEEEEccCceEEEECCCc---chHHHHHHHHHHHHHcCCEEEEe--cCC-ccHHHHHHHHHHHHHhCCCcC
Confidence 112223545667889999999999964 564 3445778999999865443 432 111122 2234445566542
Q ss_pred hhh--cchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011411 227 ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 298 (486)
Q Consensus 227 Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~v 298 (486)
++. -||...-.+|. .-|+||+|.=-|..=| ++|+.+. . |-.. +-|-|= +|-|++||.+..
T Consensus 205 vv~vv~g~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~l~-p----v~lE-LGGk~p--~iV~~dADl~~A 272 (495)
T 3b4w_A 205 VLSVVPGGIETGQALT----SNPDIDMFTFTGSSAVGREVGRRAAEMLK-P----CTLE-LGGKSA--AIILEDVDLAAA 272 (495)
T ss_dssp SEEECCBSHHHHHHHT----TCTTCCEEEEESCHHHHHHHHHHHHHTTC-C----EEEE-CCCCEE--EEECTTCCHHHH
T ss_pred eEEEEeCCHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHhhhcCC-c----eeec-CCCcce--EEECCCCCHHHH
Confidence 222 26776666665 3589999984444322 2232211 0 1111 224443 445667899887
Q ss_pred HHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHH---
Q 011411 299 AADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL--- 349 (486)
Q Consensus 299 AaDLLaQA----EHdp~a~avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl--- 349 (486)
|-.++.-+ =.--.|...++.... .. +++.+.+.+.++.+.- ...++.+.
T Consensus 273 a~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 350 (495)
T 3b4w_A 273 IPMMVFSGVMNAGQGCVNQTRILAPRS-RY-DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEG 350 (495)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEEGG-GH-HHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCCCCCCCeEEEEccc-HH-HHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCC
Confidence 77665422 122334444444332 32 5555555555544310 01111111
Q ss_pred ----------------------------------h---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HH
Q 011411 350 ----------------------------------G---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KW 385 (486)
Q Consensus 350 ----------------------------------~---~g---~iivv~~l~eai~~aN~~A-PEHLel~~~~p~---~~ 385 (486)
. .| .|+.++|+|||++++|..- +--..|.++|.. .+
T Consensus 351 a~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 430 (495)
T 3b4w_A 351 ARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKI 430 (495)
T ss_dssp CEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHH
T ss_pred CEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHH
Confidence 1 12 3455789999999999842 223567788864 56
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEE
Q 011411 386 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 386 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~ 440 (486)
+.++ .+|.|++..++ . +.-+|- +|..|..|.-+++.|+..-++.
T Consensus 431 ~~~l-~aG~V~iN~~~--~--------~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~ 479 (495)
T 3b4w_A 431 SQQI-RTGTYGINWYA--F--------DPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479 (495)
T ss_dssp HHHS-CCSCCEESSCC--C--------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHhC-CEeEEEECCCC--C--------CCCCCCCCCCCCCcCccchHHHHHHhcceeEEE
Confidence 6776 59999999753 1 122454 4556666667788898777764
No 50
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=92.84 E-value=11 Score=39.67 Aligned_cols=316 Identities=17% Similarity=0.147 Sum_probs=170.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 011411 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (486)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~ 151 (486)
...+-.+..+.+-+.++++.|+=..-.++..-+- +......-+..+++.++.|.+. ..+ |.-
T Consensus 80 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~Ev~~~~~~~~~~a~~-~~~-~~g 141 (495)
T 1wnd_A 80 TPKVRAECLLKLADVIEENGQVFAELESRNCGKP----------------LHSAFNDEIPAIVDVFRFFAGA-ARC-LNG 141 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHH-TTC-CEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHHHH-HHH-hcC
Confidence 3445556677777777777776555445444221 1111120256667777766542 221 211
Q ss_pred ----EecCceEEEEEEEeceeeeEeecCCCCCCc-hHhhhcccceeecCCCeEEEEcCCCCCCCCCHHH-HHHHHHc---
Q 011411 152 ----ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKA--- 222 (486)
Q Consensus 152 ----~~~~Gv~lGqr~~Pi~rvG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i-LaAA~l~--- 222 (486)
...+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+=|.. ..|.+ +.-++++
T Consensus 142 ~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~ea 212 (495)
T 1wnd_A 142 LAAGEYLEGHTSMIRRDPLGVVASIAPW---NYPLMMAAWKLAPALAAGNC--VVLKPSE----ITPLTALKLAELAKDI 212 (495)
T ss_dssp ECBEEEETTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT----TCCHHHHHHHHHHTTT
T ss_pred ccccCCCCCceeEEeeecCCeEEEECCC---cchHHHHHHHHHHHHHcCCe--eEeeCCC----CChHHHHHHHHHHHHh
Confidence 112465666789999999999996 467 4455678999999986 3444542 23322 2223332
Q ss_pred ---CCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCC
Q 011411 223 ---GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYA 293 (486)
Q Consensus 223 ---Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sA 293 (486)
|+=.|..-.|...-.+|. +-|.||+|.=-|..-|- +|+.+. .|-.. +-|-|=+ |-|++|
T Consensus 213 lP~gvv~vv~g~~~~~g~~L~----~~p~vd~I~FTGS~~~G~~i~~~aa~~l~-----~v~lE-LGGk~p~--iV~~dA 280 (495)
T 1wnd_A 213 FPAGVVNILFGRGKTVGDPLT----GHPKVRMVSLTGSIATGEHIISHTASSIK-----RTHME-LGGKAPV--IVFDDA 280 (495)
T ss_dssp SCTTSEEECCCCTTTTHHHHH----TCTTEEEEEEESCHHHHHHHHHHHGGGTC-----EEEEE-CCCCCEE--EECTTS
T ss_pred CCcCeEEEEeCCCHHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHHHhcCC-----ccccc-cCCCCeE--EECCcC
Confidence 222233222555445554 24889999555543332 111110 02111 2355533 445668
Q ss_pred CHHHHHHhhhhccC----cCCCCc-eEEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHH
Q 011411 294 SPVHIAADLLSQAE----HGPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFAS 346 (486)
Q Consensus 294 np~~vAaDLLaQAE----Hdp~a~-avLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~ 346 (486)
|.+..|-.++.-+= ..-.|. -++|-.+ .. ++..+.+.+.++.+.- ...++
T Consensus 281 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~ 357 (495)
T 1wnd_A 281 DIEAVVEGVRTFGYYNAGQDCTAACRIYAQKG--IY-DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVE 357 (495)
T ss_dssp CHHHHHHHHHHHTTGGGGCSTTCCCEEEEETT--TH-HHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCcEEEecch--hH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHH
Confidence 99887777654321 122233 3444433 32 5565555555554310 01111
Q ss_pred HHHh---------------------------------------CC---eEEEeCCHHHHHHHhhhhcccc--ceecccCh
Q 011411 347 KALG---------------------------------------HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDA 382 (486)
Q Consensus 347 ~sl~---------------------------------------~g---~iivv~~l~eai~~aN~~APEH--Lel~~~~p 382 (486)
.+.+ .| .|+.++|+|||++++|.. +-. ..|.++|.
T Consensus 358 ~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~gL~a~v~t~d~ 436 (495)
T 1wnd_A 358 EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDS-QYGLASSVWTKDV 436 (495)
T ss_dssp HHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSS-SCCSEEEEECSBH
T ss_pred HHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcC-CCCeeEEEECCCH
Confidence 1110 12 345578999999999985 333 45677776
Q ss_pred H---HHHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011411 383 E---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 383 ~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~SgLsV~dFlK~~s~~ 440 (486)
. .+..+++ +|.|++..++.. +.-+|-+ |..|..|.-+++.|+..-++.
T Consensus 437 ~~a~~~~~~l~-aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~ 492 (495)
T 1wnd_A 437 GRAHRVSARLQ-YGCTWVNTHFML---------VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492 (495)
T ss_dssp HHHHHHHHHCC-SSEEEESCCCCC---------CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCC-cceEEECCCCCC---------CCCCCCCCCCcCcCCccchHHHHHHhhCeEEEE
Confidence 4 4667774 999999976431 1235544 455666667788888776654
No 51
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=90.97 E-value=17 Score=37.85 Aligned_cols=319 Identities=22% Similarity=0.219 Sum_probs=158.1
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 152 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q~~~~~~~~ 152 (486)
..+-.+..+.+-+.++++.|+=..-.++...+- + ......-+..+++.++.|.+.-..-.....
T Consensus 66 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~------------~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~ 129 (478)
T 3ty7_A 66 VKERQALLDKIVKEYENRKDDIVQAITDELGAP----L------------SLSERVHYQMGLNHFVAARDALDNYEFEER 129 (478)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H------------HHHHHTHHHHHHHHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----H------------HHHhHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 344455566777777777776555555554431 0 001012244555556555432111111111
Q ss_pred ecCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCcc-hhh--
Q 011411 153 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTH-ILK-- 229 (486)
Q Consensus 153 ~~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~iLaAA~l~Gv~e-Iy~-- 229 (486)
. + ..-.++.|+.-|++..|. .+|+ ...+.-.+||-.||+.=|+=.+|-.+ ...-.+......+|+.+ ++.
T Consensus 130 ~--~-~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVlKps~~tp--~t~~~l~~~~~~aGlP~gvv~vv 202 (478)
T 3ty7_A 130 R--G-DDLVVKEAIGVSGLITPW-NFPT-NQTSLKLAAAFAAGSPVVLKPSEETP--FAAVILAEIFDKVGVPKGVFNLV 202 (478)
T ss_dssp E--T-TEEEEEEECCCEEEECCS-SSTT-HHHHHHHHHHHHHTCCEEEECCTTSC--HHHHHHHHHHHHHTCCTTTEEEC
T ss_pred C--c-cceEEecCceEEEEECCC-cchH-HHHHHHHHHHHHcCCeEEEECCCcch--HHHHHHHHHHHHhCcCcCeEEEE
Confidence 1 2 233567899999999996 3333 34445678999999876554332110 01112223445566542 221
Q ss_pred cc-hHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHhh
Q 011411 230 AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 302 (486)
Q Consensus 230 vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~~~VgID~~AGPSEvlIIAD~sAnp~~vAaDL 302 (486)
-| |...-.+|. .-|+||+|.=-|..=|- +|+.+- .|-.. +-|-+= +|-|++||.+..|.++
T Consensus 203 ~g~~~~~~~~L~----~~~~v~~v~fTGS~~~G~~i~~~aa~~~~-----~v~lE-lGGk~p--~iV~~dADl~~Aa~~i 270 (478)
T 3ty7_A 203 NGDGAGVGNPLS----EHPKVRMMSFTGSGPTGSKIMEKAAKDFK-----KVSLE-LGGKSP--YIVLDDVDIKEAAKAT 270 (478)
T ss_dssp CCCTTTTHHHHH----HCTTCCEEEECSCHHHHCC--CSTTTTTC-----EEECC-CCCCCE--EEECTTSCHHHHHHHH
T ss_pred ECCChHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHHHhcCC-----ceEEe-cCCCCC--cccCCCCCHHHHHHHH
Confidence 12 433333443 24889999866654221 111110 02111 123333 4456679999888775
Q ss_pred hhccCc----CCCCce-EEEecCchhhHHHHHHHHHHHHhcCCc----------------------HHHHHHHHh-----
Q 011411 303 LSQAEH----GPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG----- 350 (486)
Q Consensus 303 LaQAEH----dp~a~a-vLvT~s~~la~~~V~~~i~~ql~~l~r----------------------~~ia~~sl~----- 350 (486)
+.-+=. --.|.. +||-.+ .. ++..+.+.+.++.+.- .+.++.+.+
T Consensus 271 ~~~~~~~~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~ 347 (478)
T 3ty7_A 271 TGKVVNNTGQVCTAGTRVLVPNK--IK-DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAEL 347 (478)
T ss_dssp HHHHHGGGGCCTTCCCEEEEETT--TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHhCCCCccCCCeEEEcHH--HH-HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEE
Confidence 532211 223333 444433 33 6666666666654420 111121110
Q ss_pred ------------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHHh
Q 011411 351 ------------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWES 387 (486)
Q Consensus 351 ------------------------------------~g---~iivv~~l~eai~~aN~~AP-EHLel~~~~p~---~~l~ 387 (486)
.| .|+.++|+|||++++|..-- --..|.++|.. .+..
T Consensus 348 ~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~ 427 (478)
T 3ty7_A 348 FYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVAR 427 (478)
T ss_dssp EECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHH
T ss_pred EecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 12 24557899999999998432 23456677764 5666
Q ss_pred hccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEE
Q 011411 388 IIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 440 (486)
Q Consensus 388 ~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~SgLsV~dFlK~~s~~ 440 (486)
++ .+|.|++.. ++ .++-+|- +|..|..+.-+++.|+..-++.
T Consensus 428 ~l-~~G~v~vN~-~~---------~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 428 SI-EAGTVEINE-AG---------RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HS-CSSEEEETT-CC-------------------------------CCGGGEEEEEEE
T ss_pred hC-CcCeEEECC-CC---------CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 77 499999997 22 1223454 4567778888999998877765
No 52
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=82.02 E-value=2.7 Score=43.86 Aligned_cols=328 Identities=12% Similarity=0.108 Sum_probs=160.1
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCC--CCC-CceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-cCCC
Q 011411 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDK--VKL-EKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ-KSAE 148 (486)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~--~~~-~~l~Vs~~ei~~A~l~~~~~~ai~~A~~nI~~Fh~~Q-~~~~ 148 (486)
..+-.+..+.+-+.++++-|+=....++.... ... +.+. +.+..+ ..-+..+++.++.|.+.- ....
T Consensus 50 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~---~rl~~a------~~ev~~~~~~~~~~a~~~~~~~g 120 (463)
T 2h5g_A 50 PEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLL---KRLSLS------TSKLNSLAIGLRQIAASSQDSVG 120 (463)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHH---HTTCCC------HHHHHHHHHHHHHHHHHCTTSTT
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchh---hhhhhh------HHHHHHHHHHHHHHHHhhHhhcC
Confidence 34445567777777777777644444444310 000 0110 011111 112455666676665321 1111
Q ss_pred ceEEe---cCceEEEEEEEeceeeeEeecCCCCCCchHhhhcccceeecCCCeEEEEcCCCCCCCCCHHH----HHHHHH
Q 011411 149 TSVEN---MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV----LYCAKK 221 (486)
Q Consensus 149 ~~~~~---~~Gv~lGqr~~Pi~rvG~YVPGG~a~ypStvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~i----LaAA~l 221 (486)
-.... .+|...-.++.|+.-|++..|. + |.-.. ..++||-.||+. ||+=|.. ..|.+ ......
T Consensus 121 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-n-P~n~p--~~~a~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~~ 190 (463)
T 2h5g_A 121 RVLRRTRIAKNLELEQVTVPIGVLLVIFES-R-PDCLP--QVAALAIASGNG--LLLKGGK----EAAHSNRILHLLTQE 190 (463)
T ss_dssp CEEEEEEEETTEEEEEEEEECCEEEEEESS-C-TTHHH--HHHHHHHHHTCE--EEEECCG----GGHHHHHHHHHHHHH
T ss_pred cccccccCCCCceeEEEEEcCceEEEEecC-C-cHHHH--HHHHHHHHcCCE--EEEECCC----CcHHHHHHHHHHHHH
Confidence 11111 2566667889999999999987 3 43322 678999999986 4444542 34422 111222
Q ss_pred c-------CCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCC-CcccccCCCCCcEEEEEecCCC
Q 011411 222 A-------GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVIADIYA 293 (486)
Q Consensus 222 ~-------Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~-~~VgID~~AGPSEvlIIAD~sA 293 (486)
+ |+=.+.. ||...-.+|. .-|.||+|.=-|.. ...|++..... -.| +=-+-|-+ -+|-|++|
T Consensus 191 al~~~GP~gvv~vv~-g~~~~g~~L~----~~p~vd~I~FTGS~--~~G~~i~~~aal~pv-~lElGGk~--p~iV~~dA 260 (463)
T 2h5g_A 191 ALSIHGVKEAVQLVN-TREEVEDLCR----LDKMIDLIIPRGSS--QLVRDIQKAAKGIPV-MGHSEGIC--HMYVDSEA 260 (463)
T ss_dssp HHHTTTCGGGEEECC-TTCCC-----------CCCSEEEEESCH--HHHHHHHHHCSSSCB-CSCSCCCE--EEEECTTC
T ss_pred HHHhcCCCCeEEEEc-CCHHHHHHHH----hCCCcCEEEEECCH--HHHHHHHHhcCCCCE-EEecCCcc--eEEEcCCC
Confidence 2 2222221 3432222221 23789999444432 22233221100 001 11122333 34455668
Q ss_pred CHHHHHHhhhhcc-CcC--CCCce-EEEecCc---hhhHHHHHHHHHHHHhcC--Cc-----HHHHHH---HHh---CC-
Q 011411 294 SPVHIAADLLSQA-EHG--PDSQV-VLVIVGD---GVDLDAIEQEISKQCQSL--PR-----GEFASK---ALG---HS- 352 (486)
Q Consensus 294 np~~vAaDLLaQA-EHd--p~a~a-vLvT~s~---~la~~~V~~~i~~ql~~l--~r-----~~ia~~---sl~---~g- 352 (486)
|.+..|..++.-+ -++ -.|.. +||-.+- .+. +++.+...+.=..+ .. ...... .+. .|
T Consensus 261 Dl~~Aa~~i~~~~f~nGQ~C~a~~rvlV~~~i~d~p~~-~~~i~~~~~~Ga~v~~G~~~~~~g~~~~~~~~i~~eE~FgP 339 (463)
T 2h5g_A 261 SVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLF-DQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDL 339 (463)
T ss_dssp CTTTHHHHHHHHHHSCTTSTTSEEEEEEEGGGTTSHHH-HHHHHHHHHTTCEEEECHHHHC---------CCSSCCCCSS
T ss_pred CHHHHHHHHHHHhccCCCccccCcEEEEeccccchHHH-HHHHHHHHhCCCEEEeCCcccccCccCCCCchHHhccccCc
Confidence 8887766655322 122 12323 4444332 132 44433332110000 00 001101 111 13
Q ss_pred --eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhccccceeccCCCCCccccccccCCCCCCCCC-----C
Q 011411 353 --FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----G 420 (486)
Q Consensus 353 --~iivv~~l~eai~~aN~~APEH--Lel~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G 420 (486)
.|+.++|+|||++++|.+ +-. ..|.++|.. .+..++ .+|.|++..++.. +.-+|=+ |
T Consensus 340 vl~v~~~~~~deAi~~aN~~-~~gLaa~v~t~d~~~a~~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG 408 (463)
T 2h5g_A 340 ELCIEVVDNVQDAIDHIHKY-GSSHTDVIVTEDENTAEFFLQHV-DSACVFWNASTRF---------SDGYRFGLGAEVG 408 (463)
T ss_dssp EEEEEEESSHHHHHHHHHHH-CCSSEEEEECSCHHHHHHHHHHC-CSSEEEESSCGGG---------CSTTTTTSSCCSC
T ss_pred eEEEEEeCCHHHHHHHHHcC-CCCceEEEEeCCHHHHHHHHHhC-CeeEEEEeCCccC---------CCCCCCCCCccCc
Confidence 345689999999999984 332 667888875 466676 4899999975421 1236655 5
Q ss_pred cc--cc--ccCCcccccceeeeEEE
Q 011411 421 YA--RM--YGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 421 ~A--R~--~SgLsV~dFlK~~s~~~ 441 (486)
.. |+ .|..+++.|+..-++..
T Consensus 409 ~G~~r~~~~G~~gl~~ft~~K~v~~ 433 (463)
T 2h5g_A 409 ISTSRIHARGPVGLEGLLTTKWLLR 433 (463)
T ss_dssp EECCSSSCCEECCGGGGEEEEEEEE
T ss_pred CCCCcccCCCHHHHHHhceeEEEEE
Confidence 65 65 67778899988887754
No 53
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=64.78 E-value=10 Score=40.07 Aligned_cols=92 Identities=11% Similarity=0.046 Sum_probs=57.3
Q ss_pred eEEEeC---CH-----HHHHHHhhhhcccc--ceecccChH---HHHhhcc-ccceeccCCCCC--ccccccccCCCCCC
Q 011411 353 FMVFAR---DM-----LEGISFSNLYAPEH--LIVNVKDAE---KWESIIE-NAGSVFLGEWTP--ESVGDYASGTNHVL 416 (486)
Q Consensus 353 ~iivv~---~l-----~eai~~aN~~APEH--Lel~~~~p~---~~l~~I~-nAGsIFlG~~tp--~a~GDY~aGpNHvL 416 (486)
.|+.++ |. |||++++|.. +-. ..|.++|.. .+..+++ .+|.|++..++. .+.|-- ..+..+
T Consensus 410 ~v~~~~~~~~~~~~~~deAi~~aN~~-~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~--~~~~~~ 486 (534)
T 2y53_A 410 SVAPYRVTTDTNALPEAHAVALARRG-QGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG--NVMPMS 486 (534)
T ss_dssp EEEEECCCCC---CTTHHHHHHHHTT-SSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSS--CCCTTS
T ss_pred EEEEECCCCCcccCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccC--CCCCCC
Confidence 345678 99 9999999985 333 456778864 5777887 799999997642 011100 012234
Q ss_pred CCC-----Cccccc-cCCcccccceeeeEEEeCHHHHH
Q 011411 417 PTY-----GYARMY-GGVSLDSFLKYMTVQSLTEEGLK 448 (486)
Q Consensus 417 PT~-----G~AR~~-SgLsV~dFlK~~s~~~~s~~~l~ 448 (486)
|-+ |..|.. +.-+++.|+.+.+++.. +..|.
T Consensus 487 pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~-p~~l~ 523 (534)
T 2y53_A 487 LHGGPGRAGGGEELGGLRALAFYHRRSAIQAA-SAAIG 523 (534)
T ss_dssp EECCSGGGCSCCEESGGGGGGGGEEEEEEEEE-HHHHH
T ss_pred CCCCcccCCCCCCcchHHHHHHHhhhheeecC-HHHHH
Confidence 543 455663 44678889988888764 43343
No 54
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=63.25 E-value=14 Score=39.72 Aligned_cols=256 Identities=15% Similarity=0.114 Sum_probs=135.9
Q ss_pred EEEEEe-ceeeeEeecCCCCCCch-HhhhcccceeecCCCeEEEEcCCCCCCCCCHH----HHHHHHHcCCcc-hhh--c
Q 011411 160 KRVARS-IGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH-ILK--A 230 (486)
Q Consensus 160 Gqr~~P-i~rvG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Iv~~TPP~~~G~i~p~----iLaAA~l~Gv~e-Iy~--v 230 (486)
...++| +.-|++..|.- ||- ...+.+.||- ||+. ||+-|.. ..|. +......+|+.. ++. -
T Consensus 194 ~~~~r~p~GVV~~I~PwN---fP~~~~~~~~apAL-aGNt--VVlKPs~----~tp~sa~~l~~ll~eAGlP~Gvvnvv~ 263 (563)
T 4e3x_A 194 HTVYRGLEGFVAAISPFN---FTAIGGNLAGAPAL-MGNV--VLWKPSD----TAMLASYAVYRILREAGLPPNIIQFVP 263 (563)
T ss_dssp EEECCBCSSEEEEECCSS---CHHHHHHHHHHHHH-TTCC--EEEECCG----GGHHHHHHHHHHHHHTTCCTTSEEECC
T ss_pred eEEEecCceEEEEECCch---HHHHHHHHHHHHhh-cCCE--EEEECCC----CChHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 344555 58899999963 453 3345566886 7754 4455542 2332 224455667642 332 2
Q ss_pred c-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCC-cccccCCCCCcEEEEEecCCCCHHHHHHhh
Q 011411 231 G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEA-MISIDMPAGPSEVLVIADIYASPVHIAADL 302 (486)
Q Consensus 231 G-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~~-~VgID~~AGPSEvlIIAD~sAnp~~vAaDL 302 (486)
| |...-.+|. +=|.||+|.=-|..=| ++|+.+---... .|-. =+-|-+ -+|.|++||.+..|..+
T Consensus 264 g~g~~~g~~L~----~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~l-ElGGk~--p~IV~~dADld~Aa~~i 336 (563)
T 4e3x_A 264 ADGPTFGDTVT----SSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAG-ECGGKN--FHFVHSSADVDSVVSGT 336 (563)
T ss_dssp CCHHHHHHHHT----TCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEE-ECCCCE--EEEECTTSCHHHHHHHH
T ss_pred CCcHHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceec-cCCCCC--ceeeCCCCCHHHHHHHH
Confidence 3 554445554 2488999975555332 333321100000 0100 112333 35557789999988877
Q ss_pred hhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC-----c------------------HHHHHHHHh-----
Q 011411 303 LSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-----R------------------GEFASKALG----- 350 (486)
Q Consensus 303 LaQAEH----dp~a~avLvT~s~~la~~~V~~~i~~ql~~l~-----r------------------~~ia~~sl~----- 350 (486)
+.-+=. --.|...++.... +. +++.+.+.+.++.+. . ...++.+.+
T Consensus 337 v~~~f~~~GQ~C~A~~rv~V~~s-i~-d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~ 414 (563)
T 4e3x_A 337 LRSAFEYGGQKCSACSRLYVPKS-LW-PQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLS 414 (563)
T ss_dssp HHHHHGGGGCSTTCEEEEEEEGG-GH-HHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEE
T ss_pred HHHHHhcCCCCCcCCcEEEEecc-hH-HHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCE
Confidence 653322 2234444444332 43 777777776666552 0 122222221
Q ss_pred ----------------------------------CC---eEEEeCC--HHHHHHHhhhhccc--cceecccChH---HHH
Q 011411 351 ----------------------------------HS---FMVFARD--MLEGISFSNLYAPE--HLIVNVKDAE---KWE 386 (486)
Q Consensus 351 ----------------------------------~g---~iivv~~--l~eai~~aN~~APE--HLel~~~~p~---~~l 386 (486)
.| .|+.++| +|||++++|.-.|- -..|.++|.. .+.
T Consensus 415 v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~ 494 (563)
T 4e3x_A 415 ILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEAT 494 (563)
T ss_dssp EEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHH
T ss_pred EEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHH
Confidence 02 1233564 89999999432333 3467788876 566
Q ss_pred hhcc-ccceeccCCCCCccccccccCCCCCCCCC-----Ccc-ccccCCcccccceeeeEEE
Q 011411 387 SIIE-NAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYA-RMYGGVSLDSFLKYMTVQS 441 (486)
Q Consensus 387 ~~I~-nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~A-R~~SgLsV~dFlK~~s~~~ 441 (486)
++++ .+|.|++..++.... ..-+|-+ |+. |..|..++..|+..-++-+
T Consensus 495 ~~l~~~aG~v~IN~~~~~~~-------~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~ 549 (563)
T 4e3x_A 495 RMLRNAAGNFYINDKSTGSV-------VGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKE 549 (563)
T ss_dssp HHTTTTCSEEEESSCSCCCC-------TTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEE
T ss_pred HhhhcCeeEEEEcCCCCCCC-------cCCCCCCCccccCCCCccCCHHHHHHhCceEEEEE
Confidence 7774 799999998653221 1123333 333 5566677888887666543
No 55
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=49.21 E-value=20 Score=35.07 Aligned_cols=74 Identities=18% Similarity=0.253 Sum_probs=50.4
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 011411 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 275 (486)
Q Consensus 196 V~~Iv~~TPP~~~G~i~p~iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~~~Vg 275 (486)
+.++|++.|+.-+..---.+..||..+|++.++.+=-..| ||++||...-.+-+. .+-
T Consensus 153 ~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~A-aa~~~~~~~~~~~~~---------------------vlV 210 (394)
T 3qfu_A 153 VTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTA-AAIAYGLDKSDKEHQ---------------------IIV 210 (394)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHH-HHHHTTTTSCSSCEE---------------------EEE
T ss_pred cceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHH-HHHHHhhccCCCCce---------------------EEE
Confidence 4678888888532222236889999999999888876655 567898764221111 145
Q ss_pred ccCCCCCcEEEEEecC
Q 011411 276 IDMPAGPSEVLVIADI 291 (486)
Q Consensus 276 ID~~AGPSEvlIIAD~ 291 (486)
+|+=+|=+++.|+...
T Consensus 211 ~D~Gggt~dvsv~~~~ 226 (394)
T 3qfu_A 211 YDLGGGTFDVSLLSIE 226 (394)
T ss_dssp EEECSSCEEEEEEEEE
T ss_pred EEcCCCceeEEEEEEe
Confidence 7888899998888643
No 56
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=38.39 E-value=33 Score=33.80 Aligned_cols=75 Identities=16% Similarity=0.263 Sum_probs=50.5
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 011411 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 275 (486)
Q Consensus 196 V~~Iv~~TPP~~~G~i~p~iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~~~Vg 275 (486)
+.++|++.|+.-+..---.+..||..+|++.+..+=-..| ||++||...-.+. +.+ .+.+-
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~A-Aa~~~~~~~~~~~----~~~--------------~~vlV 218 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTA-AAIAYGLDKKGCA----GGE--------------KNVLI 218 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHH-HHHHTTTTSSCSS----SSC--------------CEEEE
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHH-HHHHHHhhccccc----CCC--------------ceEEE
Confidence 5688999998532222236889999999999888877766 6789998643210 000 01245
Q ss_pred ccCCCCCcEEEEEe
Q 011411 276 IDMPAGPSEVLVIA 289 (486)
Q Consensus 276 ID~~AGPSEvlIIA 289 (486)
+|+=+|=+++.|+-
T Consensus 219 ~D~GgGT~dvsv~~ 232 (404)
T 3i33_A 219 FDLGGGTFDVSILT 232 (404)
T ss_dssp EEECSSCEEEEEEE
T ss_pred EECCCCcEEEEEEE
Confidence 68888888888775
No 57
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=34.76 E-value=38 Score=33.59 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=47.4
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 011411 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 275 (486)
Q Consensus 196 V~~Iv~~TPP~~~G~i~p~iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~~~Vg 275 (486)
+.++|++.|..-+..---.+..||..+|.+.+..+=-..| ||++||.+.- +..-. .+.+-
T Consensus 150 ~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~A-Aa~~~~~~~~-----------------~~~~~--~~vlv 209 (409)
T 4gni_A 150 VTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAA-AVLAYDARPE-----------------ATISD--KIIVV 209 (409)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHH-HHHHTTC-----------------------CC--EEEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHH-HHHHHhcccc-----------------cCCCC--CEEEE
Confidence 4577888887422222236889999999998888876655 6789998630 00000 01255
Q ss_pred ccCCCCCcEEEEEe
Q 011411 276 IDMPAGPSEVLVIA 289 (486)
Q Consensus 276 ID~~AGPSEvlIIA 289 (486)
+|+=+|=+++-|+.
T Consensus 210 ~D~GgGT~dvsv~~ 223 (409)
T 4gni_A 210 ADLGGSRSDVTVLA 223 (409)
T ss_dssp EEECSSCEEEEEEE
T ss_pred EECCCCceEEEEEE
Confidence 78888999988864
No 58
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=29.24 E-value=62 Score=31.57 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=48.6
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 011411 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 275 (486)
Q Consensus 196 V~~Iv~~TPP~~~G~i~p~iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~~~Vg 275 (486)
+.++|++.|+.-+..---.+..|+..+|++.++.+=-..| ||++||.+.-.+ + . +.+-
T Consensus 135 ~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~A-aa~~~~~~~~~~-~------------------~--~~lV 192 (383)
T 1dkg_D 135 VTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTA-AALAYGLDKGTG-N------------------R--TIAV 192 (383)
T ss_dssp CCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHH-HHHHHTCCC-CC-E------------------E--EEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHH-HHHHHHhccCCC-C------------------c--EEEE
Confidence 4577777776311111135788999999998887765544 568899753100 0 0 1255
Q ss_pred ccCCCCCcEEEEEecCC
Q 011411 276 IDMPAGPSEVLVIADIY 292 (486)
Q Consensus 276 ID~~AGPSEvlIIAD~s 292 (486)
+|+=+|=+++.|+-...
T Consensus 193 vD~Gggttdvsv~~~~~ 209 (383)
T 1dkg_D 193 YDLGGGTFDISIIEIDE 209 (383)
T ss_dssp EEECSSCEEEEEEEEEC
T ss_pred EEcCCCeEEEEEEEEEe
Confidence 79999999999888663
No 59
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=26.89 E-value=81 Score=30.29 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=48.9
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 011411 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 275 (486)
Q Consensus 196 V~~Iv~~TPP~~~G~i~p~iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~~~Vg 275 (486)
..++|++.|+.-+..--..+..|+..+|++.++.+=-+.| ||++||.+.- + . .+.+-
T Consensus 95 ~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~A-aa~~~~~~~~------------------~--~--~~~lV 151 (344)
T 1jce_A 95 KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMA-AAIGSNLNVE------------------E--P--SGNMV 151 (344)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHH-HHHHTTCCTT------------------S--S--SCEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHH-HHHhcCCCCC------------------C--C--ceEEE
Confidence 4678888887422111225778999999998887755543 5689987420 0 0 01256
Q ss_pred ccCCCCCcEEEEEecC
Q 011411 276 IDMPAGPSEVLVIADI 291 (486)
Q Consensus 276 ID~~AGPSEvlIIAD~ 291 (486)
+|+=+|=+++.++.+.
T Consensus 152 vDiGggttdvsv~~~~ 167 (344)
T 1jce_A 152 VDIGGGTTEVAVISLG 167 (344)
T ss_dssp EEECSSCEEEEEEETT
T ss_pred EEeCCCeEEEEEEEcC
Confidence 7999999999999876
No 60
>1vr0_A Probable 2-phosphosulfolactate phosphatase; 15026306, putative 2-phosphosulfolactate phosphatase, struct genomics; HET: 3SL; 2.49A {Clostridium acetobutylicum} SCOP: c.148.1.1
Probab=23.75 E-value=49 Score=32.20 Aligned_cols=69 Identities=19% Similarity=0.281 Sum_probs=45.8
Q ss_pred HHHHHHhCC--eEEEeCCHHHHHHHhhhhccccceecccChHHHHhhccccceec-cCCCCCcc-ccccccCCCCCCCC-
Q 011411 344 FASKALGHS--FMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVF-LGEWTPES-VGDYASGTNHVLPT- 418 (486)
Q Consensus 344 ia~~sl~~g--~iivv~~l~eai~~aN~~APEHLel~~~~p~~~l~~I~nAGsIF-lG~~tp~a-~GDY~aGpNHvLPT- 418 (486)
.+..+|++| .|+.+.++|||.++++++- +...|.-+.- -++--| | +|+ ||.. ..+-+.|-.=||||
T Consensus 45 ti~~Al~~GA~~V~p~~~~eeA~~~a~~~~-~~~lLaGER~-----g~ki~G--FD~gN-SP~e~~~~~v~Gk~lVltTT 115 (247)
T 1vr0_A 45 VITTALNNGCKRVVPVLTVEEALKKVKEYG-KDAILGGERK-----GLKIEG--FDFSN-SPMEYTEDVVKGKTLIMTTT 115 (247)
T ss_dssp HHHHHHHTTCCEEEECSCHHHHHHHHHHHG-GGEEEEECBT-----TBCCTT--CSCCS-CGGGCCHHHHTTCEEEEECS
T ss_pred HHHHHHHCCCCEEEEeCCHHHHHHHHhhCC-CCeEEEEccC-----CccCCC--CCCCC-CHHHHhhcccCCCEEEEECC
Confidence 445667776 5999999999999999863 4444443311 111112 6 676 7865 44557999999998
Q ss_pred CCc
Q 011411 419 YGY 421 (486)
Q Consensus 419 ~G~ 421 (486)
+||
T Consensus 116 NGT 118 (247)
T 1vr0_A 116 NGT 118 (247)
T ss_dssp SHH
T ss_pred cHH
Confidence 665
No 61
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=22.42 E-value=76 Score=33.87 Aligned_cols=49 Identities=16% Similarity=0.223 Sum_probs=32.7
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCC
Q 011411 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTES 245 (486)
Q Consensus 196 V~~Iv~~TPP~~~G~i~p~iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTet 245 (486)
|.++|++.|..-+..---++..||.++|.+.+..+=-..| ||+|||...
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~A-AAlay~l~~ 183 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTA-AALAYGLDK 183 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHH-HHHHTTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHH-HHHHhhhcc
Confidence 5677777776321111236889999999988777765543 579999753
No 62
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=20.29 E-value=91 Score=33.27 Aligned_cols=49 Identities=16% Similarity=0.223 Sum_probs=35.0
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCC
Q 011411 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTES 245 (486)
Q Consensus 196 V~~Iv~~TPP~~~G~i~p~iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTet 245 (486)
|.++|++.|..-+..---++..||.++|.+.+..+--.-| ||++||...
T Consensus 135 v~~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~A-AAlaygl~~ 183 (605)
T 4b9q_A 135 VTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTA-AALAYGLDK 183 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHH-HHHHHHTTS
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHH-HHHHhhhhc
Confidence 5678888887422222236889999999998877766655 579999754
Done!