Query 011414
Match_columns 486
No_of_seqs 323 out of 1797
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 07:39:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011414.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011414hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vg0_A RAB proteins geranylger 100.0 2.5E-58 8.7E-63 487.5 43.8 417 20-481 6-555 (650)
2 3p1w_A Rabgdi protein; GDI RAB 100.0 6.5E-55 2.2E-59 449.8 37.4 378 19-444 17-404 (475)
3 2bcg_G Secretory pathway GDP d 100.0 7.3E-41 2.5E-45 347.8 37.5 376 20-443 9-387 (453)
4 1d5t_A Guanine nucleotide diss 100.0 4.3E-39 1.5E-43 332.5 35.3 370 20-443 4-376 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 3.4E-31 1.2E-35 278.5 30.1 345 23-426 2-377 (501)
6 3nrn_A Uncharacterized protein 99.9 2.5E-24 8.6E-29 221.2 25.7 332 23-445 1-340 (421)
7 3ka7_A Oxidoreductase; structu 99.9 8.9E-24 3.1E-28 217.0 29.2 336 23-445 1-356 (425)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 8.5E-24 2.9E-28 220.7 23.0 330 21-424 15-374 (478)
9 1s3e_A Amine oxidase [flavin-c 99.9 6.5E-23 2.2E-27 216.5 24.5 295 21-377 3-306 (520)
10 2yg5_A Putrescine oxidase; oxi 99.9 2.7E-22 9.3E-27 207.9 25.3 292 20-376 3-305 (453)
11 3i6d_A Protoporphyrinogen oxid 99.9 1.2E-22 4.1E-27 211.1 21.6 349 22-445 5-394 (470)
12 3lov_A Protoporphyrinogen oxid 99.9 1.1E-21 3.8E-26 204.5 26.3 329 20-423 2-364 (475)
13 3nks_A Protoporphyrinogen oxid 99.9 2.9E-22 9.8E-27 209.0 21.1 329 23-423 3-369 (477)
14 1sez_A Protoporphyrinogen oxid 99.9 9.2E-22 3.1E-26 206.7 24.7 360 21-445 12-420 (504)
15 4gde_A UDP-galactopyranose mut 99.9 6.8E-23 2.3E-27 215.6 15.0 244 22-333 10-271 (513)
16 2vvm_A Monoamine oxidase N; FA 99.9 5.2E-22 1.8E-26 208.2 19.3 295 23-376 40-349 (495)
17 4dsg_A UDP-galactopyranose mut 99.8 2E-20 6.8E-25 195.4 18.0 344 20-445 7-377 (484)
18 1rsg_A FMS1 protein; FAD bindi 99.8 2.2E-19 7.4E-24 189.3 16.4 279 19-378 5-307 (516)
19 1b37_A Protein (polyamine oxid 99.8 6.1E-18 2.1E-22 176.2 21.5 286 21-378 3-311 (472)
20 3k7m_X 6-hydroxy-L-nicotine ox 99.8 9.6E-18 3.3E-22 172.4 21.3 287 23-376 2-296 (431)
21 2iid_A L-amino-acid oxidase; f 99.8 1.1E-17 3.7E-22 175.4 17.3 283 21-376 32-335 (498)
22 2b9w_A Putative aminooxidase; 99.7 2.7E-17 9.2E-22 168.7 19.2 247 21-333 5-253 (424)
23 2jae_A L-amino acid oxidase; o 99.7 3E-17 1E-21 171.6 17.5 303 20-376 9-331 (489)
24 3hdq_A UDP-galactopyranose mut 99.6 4.7E-15 1.6E-19 149.8 18.9 311 19-441 26-352 (397)
25 1v0j_A UDP-galactopyranose mut 99.6 8.9E-17 3E-21 163.7 5.7 300 21-424 6-317 (399)
26 2e1m_A L-glutamate oxidase; L- 99.6 9.2E-15 3.2E-19 146.5 19.6 47 20-66 42-89 (376)
27 1i8t_A UDP-galactopyranose mut 99.6 5.7E-16 2E-20 155.9 8.1 226 22-333 1-230 (367)
28 4gut_A Lysine-specific histone 99.6 5.5E-14 1.9E-18 153.7 20.6 99 271-377 526-625 (776)
29 2bi7_A UDP-galactopyranose mut 99.6 2.4E-15 8.2E-20 152.2 8.5 214 21-305 2-223 (384)
30 2z3y_A Lysine-specific histone 99.5 3.6E-13 1.2E-17 145.7 19.4 101 270-378 392-501 (662)
31 2xag_A Lysine-specific histone 99.5 3.2E-13 1.1E-17 148.6 19.0 101 270-378 563-672 (852)
32 3ayj_A Pro-enzyme of L-phenyla 99.5 1.8E-13 6.3E-18 146.8 12.1 105 271-377 339-493 (721)
33 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 2.5E-12 8.5E-17 127.8 18.6 99 272-376 105-204 (342)
34 3dme_A Conserved exported prot 99.2 3.3E-11 1.1E-15 120.2 12.3 61 271-333 139-204 (369)
35 3dje_A Fructosyl amine: oxygen 99.2 1.6E-10 5.3E-15 118.8 15.4 60 271-332 149-215 (438)
36 1yvv_A Amine oxidase, flavin-c 99.1 5.2E-09 1.8E-13 103.0 21.6 43 23-65 3-45 (336)
37 3ps9_A TRNA 5-methylaminomethy 99.1 5.5E-10 1.9E-14 121.2 15.3 59 271-332 406-467 (676)
38 3nyc_A D-arginine dehydrogenas 99.1 9.4E-10 3.2E-14 110.3 15.9 59 271-333 143-204 (381)
39 3kkj_A Amine oxidase, flavin-c 99.1 9.1E-11 3.1E-15 110.8 5.2 45 23-67 3-47 (336)
40 4at0_A 3-ketosteroid-delta4-5a 99.1 5E-09 1.7E-13 109.8 18.7 42 21-62 40-81 (510)
41 3v76_A Flavoprotein; structura 99.0 8.9E-10 3E-14 112.3 11.7 58 271-332 124-181 (417)
42 3pvc_A TRNA 5-methylaminomethy 99.0 1.6E-09 5.6E-14 117.7 14.5 59 271-332 401-463 (689)
43 1y56_B Sarcosine oxidase; dehy 99.0 5.7E-09 2E-13 104.8 16.8 60 271-333 138-200 (382)
44 2gag_B Heterotetrameric sarcos 99.0 1.2E-08 4.1E-13 103.2 18.8 60 271-333 163-225 (405)
45 2i0z_A NAD(FAD)-utilizing dehy 99.0 3.5E-09 1.2E-13 109.1 14.1 60 271-332 125-185 (447)
46 1y0p_A Fumarate reductase flav 99.0 2.7E-08 9.4E-13 105.6 21.0 53 279-332 255-311 (571)
47 1qo8_A Flavocytochrome C3 fuma 99.0 1.8E-08 6E-13 107.0 19.2 59 272-332 240-306 (566)
48 3nlc_A Uncharacterized protein 98.9 3.9E-09 1.3E-13 110.9 12.2 53 279-333 220-272 (549)
49 1pj5_A N,N-dimethylglycine oxi 98.9 4.1E-08 1.4E-12 109.0 18.4 60 271-333 140-202 (830)
50 3oz2_A Digeranylgeranylglycero 98.8 2.7E-09 9.4E-14 107.2 4.9 42 20-61 2-43 (397)
51 1d4d_A Flavocytochrome C fumar 98.8 2.3E-07 7.8E-12 98.5 19.3 52 279-332 255-311 (572)
52 3fpz_A Thiazole biosynthetic e 98.6 1.9E-08 6.5E-13 99.0 4.9 43 21-63 64-108 (326)
53 4fk1_A Putative thioredoxin re 98.6 3.4E-08 1.2E-12 96.1 4.9 41 19-60 3-43 (304)
54 3itj_A Thioredoxin reductase 1 98.5 4E-08 1.4E-12 96.5 4.7 59 6-64 6-68 (338)
55 4gcm_A TRXR, thioredoxin reduc 98.5 5.3E-08 1.8E-12 95.0 5.1 41 21-62 5-45 (312)
56 3cgv_A Geranylgeranyl reductas 98.5 8.6E-08 2.9E-12 96.5 4.9 42 20-61 2-43 (397)
57 3lxd_A FAD-dependent pyridine 98.5 1.9E-06 6.4E-11 87.6 14.8 56 278-335 193-248 (415)
58 4a5l_A Thioredoxin reductase; 98.4 1.3E-07 4.4E-12 92.1 5.2 36 21-56 3-38 (314)
59 3urh_A Dihydrolipoyl dehydroge 98.4 8.3E-08 2.8E-12 100.0 4.0 50 14-64 18-67 (491)
60 1ryi_A Glycine oxidase; flavop 98.4 1.5E-07 5.1E-12 94.3 5.6 59 271-333 153-214 (382)
61 4a9w_A Monooxygenase; baeyer-v 98.4 1.3E-07 4.5E-12 93.4 4.8 44 20-63 1-44 (357)
62 3o0h_A Glutathione reductase; 98.4 1.1E-07 3.6E-12 99.0 4.1 52 279-333 232-283 (484)
63 2gjc_A Thiazole biosynthetic e 98.4 2.9E-07 1E-11 89.9 6.8 56 7-62 32-107 (326)
64 2gqf_A Hypothetical protein HI 98.4 9.9E-08 3.4E-12 96.7 3.6 43 20-62 2-44 (401)
65 2oln_A NIKD protein; flavoprot 98.4 1.9E-07 6.6E-12 94.2 5.4 58 271-332 142-202 (397)
66 3k30_A Histamine dehydrogenase 98.4 2.6E-07 8.8E-12 100.3 6.5 61 2-63 372-432 (690)
67 3fg2_P Putative rubredoxin red 98.4 7.4E-06 2.5E-10 82.9 16.8 56 278-335 183-238 (404)
68 3da1_A Glycerol-3-phosphate de 98.4 2E-07 6.7E-12 98.7 5.1 60 271-332 160-226 (561)
69 2zbw_A Thioredoxin reductase; 98.4 1.7E-07 5.8E-12 92.2 4.1 45 19-63 2-46 (335)
70 1rp0_A ARA6, thiazole biosynth 98.4 2.3E-07 7.9E-12 89.4 4.8 41 21-61 38-79 (284)
71 3ab1_A Ferredoxin--NADP reduct 98.3 2.1E-07 7E-12 92.7 4.2 45 19-63 11-55 (360)
72 3l8k_A Dihydrolipoyl dehydroge 98.3 1.7E-07 5.9E-12 96.9 3.8 43 21-63 3-45 (466)
73 4ap3_A Steroid monooxygenase; 98.3 2.4E-07 8.1E-12 97.8 4.6 47 19-65 18-64 (549)
74 3rp8_A Flavoprotein monooxygen 98.3 2.7E-07 9.2E-12 93.5 4.9 41 19-59 20-60 (407)
75 1c0p_A D-amino acid oxidase; a 98.3 4.2E-07 1.4E-11 90.6 5.9 40 20-59 4-43 (363)
76 2uzz_A N-methyl-L-tryptophan o 98.3 3.3E-07 1.1E-11 91.4 5.1 58 271-332 138-198 (372)
77 3c96_A Flavin-containing monoo 98.3 3.6E-07 1.2E-11 92.7 5.4 43 20-62 2-45 (410)
78 3nix_A Flavoprotein/dehydrogen 98.3 4.4E-07 1.5E-11 92.2 5.5 53 279-332 106-160 (421)
79 3jsk_A Cypbp37 protein; octame 98.3 4.3E-07 1.5E-11 89.2 5.0 40 22-61 79-120 (344)
80 2qcu_A Aerobic glycerol-3-phos 98.3 4.8E-07 1.6E-11 94.5 5.6 51 279-332 149-204 (501)
81 2xdo_A TETX2 protein; tetracyc 98.3 5.2E-07 1.8E-11 91.2 5.5 41 20-60 24-64 (398)
82 4dna_A Probable glutathione re 98.3 3.3E-07 1.1E-11 94.7 4.0 52 279-333 211-263 (463)
83 2gv8_A Monooxygenase; FMO, FAD 98.3 6.2E-07 2.1E-11 92.1 6.0 44 20-63 4-49 (447)
84 1w4x_A Phenylacetone monooxyge 98.3 5.4E-07 1.8E-11 95.0 5.5 44 19-62 13-56 (542)
85 2gf3_A MSOX, monomeric sarcosi 98.3 6.2E-07 2.1E-11 89.9 5.7 51 279-333 150-200 (389)
86 3f8d_A Thioredoxin reductase ( 98.3 5.7E-07 1.9E-11 87.5 5.2 40 22-63 15-54 (323)
87 3lzw_A Ferredoxin--NADP reduct 98.3 3.8E-07 1.3E-11 89.2 3.9 42 21-62 6-47 (332)
88 3alj_A 2-methyl-3-hydroxypyrid 98.3 6.5E-07 2.2E-11 89.8 5.7 41 20-60 9-49 (379)
89 3cty_A Thioredoxin reductase; 98.3 5.7E-07 2E-11 87.8 5.0 43 20-63 14-56 (319)
90 2cul_A Glucose-inhibited divis 98.2 6.5E-07 2.2E-11 83.5 4.9 36 20-55 1-36 (232)
91 3lad_A Dihydrolipoamide dehydr 98.2 6.2E-07 2.1E-11 92.9 5.1 41 21-61 2-42 (476)
92 1mo9_A ORF3; nucleotide bindin 98.2 7.5E-07 2.6E-11 93.5 5.7 46 18-63 39-84 (523)
93 3axb_A Putative oxidoreductase 98.2 5.4E-07 1.9E-11 92.5 4.5 60 271-333 170-249 (448)
94 2vou_A 2,6-dihydroxypyridine h 98.2 9.2E-07 3.2E-11 89.3 6.1 38 20-57 3-40 (397)
95 3qfa_A Thioredoxin reductase 1 98.2 7.7E-07 2.6E-11 93.3 5.6 45 20-64 30-82 (519)
96 2vdc_G Glutamate synthase [NAD 98.2 9.8E-07 3.3E-11 90.9 6.2 53 9-62 110-162 (456)
97 2q7v_A Thioredoxin reductase; 98.2 6.8E-07 2.3E-11 87.5 4.8 43 20-63 6-48 (325)
98 3d1c_A Flavin-containing putat 98.2 5.4E-07 1.8E-11 89.7 3.9 44 20-64 2-46 (369)
99 3r9u_A Thioredoxin reductase; 98.2 6.9E-07 2.3E-11 86.7 4.4 42 21-63 3-45 (315)
100 3i3l_A Alkylhalidase CMLS; fla 98.2 1.1E-06 3.8E-11 93.3 6.2 52 279-332 128-182 (591)
101 3uox_A Otemo; baeyer-villiger 98.2 9.7E-07 3.3E-11 93.0 5.1 46 20-65 7-52 (545)
102 3gwf_A Cyclohexanone monooxyge 98.2 7.6E-07 2.6E-11 93.7 4.3 46 20-65 6-52 (540)
103 3dk9_A Grase, GR, glutathione 98.2 5.8E-07 2E-11 93.2 3.3 43 20-63 18-60 (478)
104 3c4n_A Uncharacterized protein 98.2 9.8E-07 3.3E-11 89.4 4.9 58 271-332 161-230 (405)
105 1v59_A Dihydrolipoamide dehydr 98.2 5E-07 1.7E-11 93.7 2.8 44 20-63 3-46 (478)
106 2wdq_A Succinate dehydrogenase 98.2 7.9E-07 2.7E-11 94.5 4.3 53 279-332 143-200 (588)
107 3e1t_A Halogenase; flavoprotei 98.2 1.1E-06 3.8E-11 91.9 5.4 52 279-332 111-166 (512)
108 1dxl_A Dihydrolipoamide dehydr 98.2 1E-06 3.5E-11 91.1 5.0 44 20-63 4-47 (470)
109 3gyx_A Adenylylsulfate reducta 98.2 1.4E-06 4.7E-11 93.7 6.0 52 279-332 166-227 (662)
110 2a87_A TRXR, TR, thioredoxin r 98.2 1E-06 3.5E-11 86.7 4.7 44 19-63 11-54 (335)
111 3dgz_A Thioredoxin reductase 2 98.2 1.1E-06 3.6E-11 91.5 4.9 45 20-64 4-56 (488)
112 3ic9_A Dihydrolipoamide dehydr 98.2 6.9E-07 2.4E-11 93.0 3.5 40 22-62 8-47 (492)
113 1o94_A Tmadh, trimethylamine d 98.2 1.2E-06 4.1E-11 95.6 5.5 44 20-63 387-430 (729)
114 2x3n_A Probable FAD-dependent 98.2 1.2E-06 4.1E-11 88.4 5.0 52 279-332 107-160 (399)
115 3atr_A Conserved archaeal prot 98.2 7E-07 2.4E-11 91.9 3.3 51 280-332 101-156 (453)
116 3pl8_A Pyranose 2-oxidase; sub 98.2 1.4E-06 4.7E-11 93.3 5.6 42 21-62 45-86 (623)
117 2r0c_A REBC; flavin adenine di 98.2 1.4E-06 4.7E-11 92.0 5.6 41 21-61 25-65 (549)
118 1zmd_A Dihydrolipoyl dehydroge 98.2 8.3E-07 2.8E-11 91.9 3.8 44 20-63 4-47 (474)
119 3ihg_A RDME; flavoenzyme, anth 98.2 1.7E-06 5.9E-11 90.9 6.3 39 20-58 3-41 (535)
120 2rgh_A Alpha-glycerophosphate 98.2 1.5E-06 5.1E-11 92.2 5.8 60 271-332 178-244 (571)
121 2bs2_A Quinol-fumarate reducta 98.2 9.7E-07 3.3E-11 94.9 4.4 52 279-332 158-214 (660)
122 2qae_A Lipoamide, dihydrolipoy 98.1 9.2E-07 3.2E-11 91.4 4.1 42 22-63 2-43 (468)
123 1ojt_A Surface protein; redox- 98.1 7.4E-07 2.5E-11 92.5 3.2 44 20-63 4-47 (482)
124 2gmh_A Electron transfer flavo 98.1 1.3E-06 4.3E-11 92.9 5.0 40 22-61 35-80 (584)
125 1chu_A Protein (L-aspartate ox 98.1 1.3E-06 4.3E-11 92.1 4.9 41 20-61 6-46 (540)
126 2qa1_A PGAE, polyketide oxygen 98.1 1.9E-06 6.4E-11 89.9 6.2 40 20-59 9-48 (500)
127 2yqu_A 2-oxoglutarate dehydrog 98.1 9.8E-07 3.4E-11 90.9 3.9 52 279-333 208-259 (455)
128 1vdc_A NTR, NADPH dependent th 98.1 9.5E-07 3.3E-11 86.6 3.7 44 20-63 6-53 (333)
129 2a8x_A Dihydrolipoyl dehydroge 98.1 9.6E-07 3.3E-11 91.2 3.6 42 21-63 2-43 (464)
130 1zk7_A HGII, reductase, mercur 98.1 1.3E-06 4.5E-11 90.3 4.3 43 20-63 2-44 (467)
131 3dgh_A TRXR-1, thioredoxin red 98.1 1.7E-06 5.7E-11 89.9 5.1 53 279-333 227-284 (483)
132 3fmw_A Oxygenase; mithramycin, 98.1 2.1E-06 7.2E-11 90.9 5.9 38 21-58 48-85 (570)
133 2bry_A NEDD9 interacting prote 98.1 2.2E-06 7.4E-11 89.3 5.9 41 20-60 90-130 (497)
134 2r9z_A Glutathione amide reduc 98.1 1.3E-06 4.4E-11 90.2 4.1 51 280-333 208-259 (463)
135 1trb_A Thioredoxin reductase; 98.1 1.2E-06 4.1E-11 85.3 3.7 42 20-62 3-44 (320)
136 2q0l_A TRXR, thioredoxin reduc 98.1 2.1E-06 7.2E-11 83.3 5.4 40 23-63 2-42 (311)
137 2hqm_A GR, grase, glutathione 98.1 1.3E-06 4.3E-11 90.7 3.7 54 279-333 226-280 (479)
138 1ges_A Glutathione reductase; 98.1 1.3E-06 4.6E-11 89.7 3.7 53 279-333 208-260 (450)
139 3g3e_A D-amino-acid oxidase; F 98.1 1.4E-06 4.8E-11 86.3 3.4 37 23-59 1-43 (351)
140 2h88_A Succinate dehydrogenase 98.1 1.8E-06 6.3E-11 92.1 4.4 52 279-332 155-211 (621)
141 2zxi_A TRNA uridine 5-carboxym 98.1 2.5E-06 8.7E-11 90.2 5.4 51 279-332 123-174 (637)
142 2qa2_A CABE, polyketide oxygen 98.1 2.9E-06 9.8E-11 88.5 5.7 39 21-59 11-49 (499)
143 1k0i_A P-hydroxybenzoate hydro 98.1 2.1E-06 7E-11 86.5 4.4 35 22-56 2-36 (394)
144 1fec_A Trypanothione reductase 98.0 2E-06 6.7E-11 89.5 4.1 53 279-333 231-283 (490)
145 2eq6_A Pyruvate dehydrogenase 98.0 1.7E-06 5.7E-11 89.4 3.6 43 20-63 4-46 (464)
146 3cp8_A TRNA uridine 5-carboxym 98.0 2.5E-06 8.6E-11 90.5 4.9 46 14-59 13-59 (641)
147 4hb9_A Similarities with proba 98.0 3.3E-06 1.1E-10 85.0 5.2 35 23-57 2-36 (412)
148 3fbs_A Oxidoreductase; structu 98.0 2.9E-06 9.9E-11 81.4 4.5 59 271-336 166-224 (297)
149 2xve_A Flavin-containing monoo 98.0 3.4E-06 1.2E-10 87.1 5.2 42 23-64 3-50 (464)
150 1y56_A Hypothetical protein PH 98.0 2.8E-06 9.5E-11 88.5 4.5 43 20-63 106-148 (493)
151 2wpf_A Trypanothione reductase 98.0 2E-06 6.9E-11 89.5 3.3 53 279-333 235-287 (495)
152 3ces_A MNMG, tRNA uridine 5-ca 98.0 3.1E-06 1.1E-10 89.8 4.7 38 21-58 27-65 (651)
153 2aqj_A Tryptophan halogenase, 98.0 4.5E-06 1.5E-10 87.8 5.9 52 279-332 165-216 (538)
154 2dkh_A 3-hydroxybenzoate hydro 98.0 8.5E-06 2.9E-10 87.5 8.0 38 21-58 31-69 (639)
155 1lvl_A Dihydrolipoamide dehydr 98.0 2.2E-06 7.5E-11 88.3 3.2 42 21-63 4-45 (458)
156 1ebd_A E3BD, dihydrolipoamide 98.0 2.6E-06 8.8E-11 87.7 3.7 41 22-63 3-43 (455)
157 3g5s_A Methylenetetrahydrofola 98.0 5.8E-06 2E-10 82.0 5.9 40 23-62 2-41 (443)
158 3c4a_A Probable tryptophan hyd 98.0 3.7E-06 1.3E-10 84.4 4.7 35 23-57 1-37 (381)
159 1ps9_A 2,4-dienoyl-COA reducta 98.0 6.1E-06 2.1E-10 89.2 6.6 43 20-62 371-413 (671)
160 1fl2_A Alkyl hydroperoxide red 98.0 4.7E-06 1.6E-10 80.8 4.9 39 22-62 1-39 (310)
161 1kf6_A Fumarate reductase flav 98.0 2.6E-06 8.9E-11 90.8 3.3 52 279-332 134-191 (602)
162 1kdg_A CDH, cellobiose dehydro 98.0 4.8E-06 1.6E-10 87.8 5.2 38 20-57 5-42 (546)
163 1xdi_A RV3303C-LPDA; reductase 98.0 2.4E-06 8.1E-11 89.1 2.7 50 280-332 224-273 (499)
164 3ihm_A Styrene monooxygenase A 98.0 3.7E-06 1.3E-10 85.9 4.1 33 23-55 23-55 (430)
165 1onf_A GR, grase, glutathione 98.0 3.6E-06 1.2E-10 87.7 4.0 54 279-334 217-271 (500)
166 4b1b_A TRXR, thioredoxin reduc 97.9 3.9E-06 1.3E-10 88.1 4.0 51 279-332 263-313 (542)
167 3q9t_A Choline dehydrogenase a 97.9 5.4E-06 1.8E-10 87.7 5.1 37 20-56 4-41 (577)
168 3t37_A Probable dehydrogenase; 97.9 4.6E-06 1.6E-10 87.4 4.6 36 21-56 16-52 (526)
169 2e5v_A L-aspartate oxidase; ar 97.9 6.4E-06 2.2E-10 85.2 5.5 51 279-332 119-170 (472)
170 3s5w_A L-ornithine 5-monooxyge 97.9 4.9E-06 1.7E-10 85.7 4.4 41 21-61 29-74 (463)
171 2ywl_A Thioredoxin reductase r 97.9 7.4E-06 2.5E-10 72.8 4.8 33 23-55 2-34 (180)
172 3qvp_A Glucose oxidase; oxidor 97.9 8E-06 2.7E-10 86.4 5.3 38 18-55 15-53 (583)
173 1jnr_A Adenylylsulfate reducta 97.9 6.8E-06 2.3E-10 88.3 4.5 52 279-332 151-212 (643)
174 2e4g_A Tryptophan halogenase; 97.9 1E-05 3.5E-10 85.3 5.6 52 279-332 194-246 (550)
175 2gag_A Heterotetrameric sarcos 97.8 7.7E-06 2.6E-10 91.9 4.5 42 21-62 127-168 (965)
176 2pyx_A Tryptophan halogenase; 97.8 8E-06 2.7E-10 85.7 4.3 52 279-332 175-227 (526)
177 1ju2_A HydroxynitrIle lyase; f 97.8 7E-06 2.4E-10 86.3 3.7 38 21-59 25-62 (536)
178 1hyu_A AHPF, alkyl hydroperoxi 97.8 1.2E-05 4.1E-10 84.2 5.3 41 20-62 210-250 (521)
179 1lqt_A FPRA; NADP+ derivative, 97.8 8.9E-06 3E-10 83.7 3.6 43 20-62 1-50 (456)
180 1pn0_A Phenol 2-monooxygenase; 97.8 1.3E-05 4.3E-10 86.5 4.6 44 21-64 7-57 (665)
181 3kd9_A Coenzyme A disulfide re 97.8 1.4E-05 4.9E-10 81.9 4.8 42 20-61 1-44 (449)
182 2weu_A Tryptophan 5-halogenase 97.8 9.5E-06 3.3E-10 84.7 3.4 52 279-332 173-224 (511)
183 3cgb_A Pyridine nucleotide-dis 97.8 1.4E-05 4.7E-10 82.8 4.4 51 279-333 227-277 (480)
184 3iwa_A FAD-dependent pyridine 97.8 1.3E-05 4.3E-10 82.9 4.0 54 278-334 201-254 (472)
185 2x8g_A Thioredoxin glutathione 97.8 1.4E-05 4.7E-10 85.2 4.4 35 20-54 105-139 (598)
186 1gte_A Dihydropyrimidine dehyd 97.7 1.8E-05 6.1E-10 89.5 5.3 41 21-61 186-227 (1025)
187 1cjc_A Protein (adrenodoxin re 97.7 1.6E-05 5.4E-10 81.9 4.1 42 21-62 5-48 (460)
188 3ics_A Coenzyme A-disulfide re 97.7 2.1E-05 7.1E-10 83.7 4.9 50 279-333 228-277 (588)
189 1n4w_A CHOD, cholesterol oxida 97.7 2.3E-05 7.9E-10 81.7 5.1 39 20-58 3-41 (504)
190 3fim_B ARYL-alcohol oxidase; A 97.7 2.2E-05 7.6E-10 82.8 4.2 38 22-59 2-40 (566)
191 3oc4_A Oxidoreductase, pyridin 97.6 2.9E-05 9.8E-10 79.8 4.5 51 279-333 189-239 (452)
192 3h28_A Sulfide-quinone reducta 97.6 2.9E-05 9.9E-10 79.2 4.1 39 23-61 3-43 (430)
193 1coy_A Cholesterol oxidase; ox 97.6 5.2E-05 1.8E-09 79.1 5.9 38 20-57 9-46 (507)
194 2cdu_A NADPH oxidase; flavoenz 97.6 3.5E-05 1.2E-09 79.1 4.5 53 278-333 190-242 (452)
195 1gpe_A Protein (glucose oxidas 97.6 4.1E-05 1.4E-09 81.3 5.1 38 20-57 22-60 (587)
196 1q1r_A Putidaredoxin reductase 97.6 5.3E-05 1.8E-09 77.3 5.7 54 279-334 191-246 (431)
197 2jbv_A Choline oxidase; alcoho 97.6 5.3E-05 1.8E-09 79.7 5.5 40 20-59 11-51 (546)
198 2v3a_A Rubredoxin reductase; a 97.5 5.4E-05 1.9E-09 75.9 4.9 53 279-334 187-239 (384)
199 3h8l_A NADH oxidase; membrane 97.5 3.2E-05 1.1E-09 78.2 3.0 51 279-336 218-268 (409)
200 1m6i_A Programmed cell death p 97.5 5.4E-05 1.8E-09 78.7 4.7 53 279-334 226-278 (493)
201 1nhp_A NADH peroxidase; oxidor 97.5 5.4E-05 1.8E-09 77.6 4.4 51 279-333 191-241 (447)
202 2bc0_A NADH oxidase; flavoprot 97.5 5.2E-05 1.8E-09 78.7 4.3 51 279-333 236-286 (490)
203 2gqw_A Ferredoxin reductase; f 97.5 7.2E-05 2.5E-09 75.7 4.9 49 279-334 187-235 (408)
204 3sx6_A Sulfide-quinone reducta 97.4 7.6E-05 2.6E-09 76.2 4.1 36 22-57 4-42 (437)
205 1xhc_A NADH oxidase /nitrite r 97.4 9.9E-05 3.4E-09 73.6 4.7 47 279-333 183-229 (367)
206 3ef6_A Toluene 1,2-dioxygenase 97.3 0.00015 5.2E-09 73.4 5.1 53 279-334 185-237 (410)
207 3ntd_A FAD-dependent pyridine 97.3 0.00012 4.2E-09 77.2 4.5 36 23-58 2-39 (565)
208 4b63_A L-ornithine N5 monooxyg 97.2 8.1E-05 2.8E-09 77.5 2.1 44 20-63 37-80 (501)
209 4g6h_A Rotenone-insensitive NA 97.1 0.00033 1.1E-08 72.8 4.3 36 21-56 41-76 (502)
210 3klj_A NAD(FAD)-dependent dehy 97.0 0.00048 1.6E-08 69.1 5.2 39 21-59 8-46 (385)
211 3vrd_B FCCB subunit, flavocyto 97.0 0.00037 1.3E-08 70.0 4.0 37 24-60 4-42 (401)
212 4eqs_A Coenzyme A disulfide re 96.9 0.00054 1.8E-08 69.9 4.3 47 279-332 188-234 (437)
213 3hyw_A Sulfide-quinone reducta 96.8 0.00069 2.3E-08 68.9 4.1 34 24-57 4-39 (430)
214 1nhp_A NADH peroxidase; oxidor 95.7 0.01 3.6E-07 60.3 5.8 39 22-60 149-187 (447)
215 3fwz_A Inner membrane protein 95.7 0.015 5E-07 49.0 5.6 33 23-55 8-40 (140)
216 3klj_A NAD(FAD)-dependent dehy 95.6 0.009 3.1E-07 59.7 4.9 38 23-60 147-184 (385)
217 2g1u_A Hypothetical protein TM 95.5 0.013 4.3E-07 50.3 4.8 34 22-55 19-52 (155)
218 1lss_A TRK system potassium up 95.5 0.012 4.2E-07 48.9 4.7 33 23-55 5-37 (140)
219 4gcm_A TRXR, thioredoxin reduc 95.3 0.014 4.8E-07 56.0 4.7 37 23-59 146-182 (312)
220 1id1_A Putative potassium chan 95.2 0.021 7.1E-07 48.8 5.2 34 22-55 3-36 (153)
221 1lvl_A Dihydrolipoamide dehydr 95.0 0.017 5.7E-07 59.1 4.7 37 23-59 172-208 (458)
222 3llv_A Exopolyphosphatase-rela 95.0 0.022 7.5E-07 47.8 4.6 33 23-55 7-39 (141)
223 2v3a_A Rubredoxin reductase; a 95.0 0.022 7.4E-07 56.7 5.2 39 23-61 146-184 (384)
224 2eq6_A Pyruvate dehydrogenase 94.9 0.022 7.6E-07 58.3 5.2 37 23-59 170-206 (464)
225 1ebd_A E3BD, dihydrolipoamide 94.9 0.022 7.6E-07 58.1 5.0 37 23-59 171-207 (455)
226 2yqu_A 2-oxoglutarate dehydrog 94.8 0.022 7.7E-07 58.0 5.0 37 23-59 168-204 (455)
227 1xhc_A NADH oxidase /nitrite r 94.8 0.022 7.5E-07 56.4 4.7 37 23-59 144-180 (367)
228 1v59_A Dihydrolipoamide dehydr 94.8 0.026 8.9E-07 57.9 5.4 38 23-60 184-221 (478)
229 3c85_A Putative glutathione-re 94.8 0.027 9.4E-07 49.5 4.8 36 20-55 37-73 (183)
230 3k6j_A Protein F01G10.3, confi 94.5 0.039 1.3E-06 56.1 5.6 53 4-56 31-88 (460)
231 2gqw_A Ferredoxin reductase; f 94.4 0.035 1.2E-06 55.8 5.2 38 23-60 146-183 (408)
232 4a5l_A Thioredoxin reductase; 94.4 0.031 1.1E-06 53.5 4.6 35 23-57 153-187 (314)
233 1ges_A Glutathione reductase; 94.4 0.032 1.1E-06 56.8 5.0 37 23-59 168-204 (450)
234 3ic5_A Putative saccharopine d 94.4 0.039 1.3E-06 44.2 4.5 32 23-54 6-38 (118)
235 1ryi_A Glycine oxidase; flavop 94.3 0.066 2.3E-06 52.7 6.8 45 15-59 10-54 (382)
236 4e12_A Diketoreductase; oxidor 94.1 0.05 1.7E-06 51.7 5.2 34 22-55 4-37 (283)
237 2r9z_A Glutathione amide reduc 94.1 0.042 1.4E-06 56.1 5.0 37 23-59 167-203 (463)
238 3cgb_A Pyridine nucleotide-dis 94.0 0.03 1E-06 57.5 3.8 38 22-59 186-223 (480)
239 3ado_A Lambda-crystallin; L-gu 94.0 0.046 1.6E-06 52.9 4.7 33 23-55 7-39 (319)
240 1f0y_A HCDH, L-3-hydroxyacyl-C 93.9 0.055 1.9E-06 51.9 5.3 33 23-55 16-48 (302)
241 1zmd_A Dihydrolipoyl dehydroge 93.8 0.054 1.9E-06 55.4 5.3 37 23-59 179-215 (474)
242 3doj_A AT3G25530, dehydrogenas 93.8 0.056 1.9E-06 52.1 5.0 48 9-56 7-55 (310)
243 3qsg_A NAD-binding phosphogluc 93.8 0.042 1.4E-06 53.1 4.1 49 7-55 7-58 (312)
244 2bc0_A NADH oxidase; flavoprot 93.8 0.05 1.7E-06 56.0 4.9 37 23-59 195-231 (490)
245 2a8x_A Dihydrolipoyl dehydroge 93.7 0.055 1.9E-06 55.2 5.0 37 23-59 172-208 (464)
246 3ic9_A Dihydrolipoamide dehydr 93.7 0.061 2.1E-06 55.4 5.3 38 23-60 175-212 (492)
247 3dtt_A NADP oxidoreductase; st 93.6 0.059 2E-06 50.0 4.8 37 19-55 16-52 (245)
248 2hmt_A YUAA protein; RCK, KTN, 93.6 0.053 1.8E-06 45.1 4.0 31 24-54 8-38 (144)
249 1ojt_A Surface protein; redox- 93.6 0.046 1.6E-06 56.1 4.4 37 23-59 186-222 (482)
250 3da1_A Glycerol-3-phosphate de 93.6 0.09 3.1E-06 55.2 6.6 44 19-62 15-58 (561)
251 3axb_A Putative oxidoreductase 93.6 0.12 4E-06 52.3 7.3 42 20-61 21-63 (448)
252 3ef6_A Toluene 1,2-dioxygenase 93.6 0.06 2E-06 54.0 5.0 37 23-59 144-180 (410)
253 4e21_A 6-phosphogluconate dehy 93.6 0.06 2E-06 53.1 4.8 39 17-55 17-55 (358)
254 3d1c_A Flavin-containing putat 93.5 0.056 1.9E-06 52.9 4.5 36 23-58 167-202 (369)
255 3kd9_A Coenzyme A disulfide re 93.5 0.068 2.3E-06 54.3 5.3 37 24-60 150-186 (449)
256 2q0l_A TRXR, thioredoxin reduc 93.4 0.066 2.3E-06 51.0 4.8 36 23-58 144-179 (311)
257 3gwf_A Cyclohexanone monooxyge 93.4 0.074 2.5E-06 55.5 5.5 35 22-56 178-212 (540)
258 1dxl_A Dihydrolipoamide dehydr 93.3 0.048 1.6E-06 55.7 3.9 37 23-59 178-214 (470)
259 2uzz_A N-methyl-L-tryptophan o 93.3 0.15 5.2E-06 49.9 7.4 42 22-63 2-43 (372)
260 3l4b_C TRKA K+ channel protien 93.3 0.06 2E-06 48.9 4.1 32 24-55 2-33 (218)
261 2hqm_A GR, grase, glutathione 93.2 0.071 2.4E-06 54.7 5.0 37 23-59 186-222 (479)
262 2oln_A NIKD protein; flavoprot 93.2 0.2 6.8E-06 49.6 8.1 38 21-58 3-40 (397)
263 1pzg_A LDH, lactate dehydrogen 93.2 0.083 2.9E-06 51.4 5.1 34 22-55 9-43 (331)
264 1onf_A GR, grase, glutathione 93.1 0.075 2.5E-06 54.9 5.0 37 23-59 177-213 (500)
265 1fl2_A Alkyl hydroperoxide red 93.1 0.076 2.6E-06 50.6 4.6 35 23-57 145-179 (310)
266 3uox_A Otemo; baeyer-villiger 93.0 0.082 2.8E-06 55.2 5.2 37 21-57 184-220 (545)
267 2y0c_A BCEC, UDP-glucose dehyd 93.0 0.077 2.6E-06 54.4 4.8 34 22-55 8-41 (478)
268 3fg2_P Putative rubredoxin red 93.0 0.092 3.1E-06 52.5 5.3 39 23-61 143-181 (404)
269 3k96_A Glycerol-3-phosphate de 93.0 0.089 3.1E-06 51.8 5.1 36 20-55 27-62 (356)
270 4eqs_A Coenzyme A disulfide re 93.0 0.1 3.6E-06 52.8 5.8 38 24-61 149-186 (437)
271 1bg6_A N-(1-D-carboxylethyl)-L 93.0 0.082 2.8E-06 51.8 4.8 35 21-55 3-37 (359)
272 2raf_A Putative dinucleotide-b 92.9 0.1 3.5E-06 47.1 5.0 35 22-56 19-53 (209)
273 1zk7_A HGII, reductase, mercur 92.9 0.087 3E-06 53.8 5.0 37 23-59 177-213 (467)
274 2xve_A Flavin-containing monoo 92.9 0.081 2.8E-06 54.0 4.8 36 23-58 198-233 (464)
275 2qae_A Lipoamide, dihydrolipoy 92.8 0.09 3.1E-06 53.7 5.0 37 23-59 175-211 (468)
276 1vdc_A NTR, NADPH dependent th 92.8 0.087 3E-06 50.8 4.7 36 23-58 160-195 (333)
277 2rgh_A Alpha-glycerophosphate 92.8 0.2 6.7E-06 52.7 7.7 40 21-60 31-70 (571)
278 4ap3_A Steroid monooxygenase; 92.8 0.085 2.9E-06 55.2 4.8 37 21-57 190-226 (549)
279 3lxd_A FAD-dependent pyridine 92.8 0.1 3.5E-06 52.3 5.3 39 23-61 153-191 (415)
280 2dpo_A L-gulonate 3-dehydrogen 92.7 0.095 3.2E-06 50.7 4.8 34 23-56 7-40 (319)
281 3g0o_A 3-hydroxyisobutyrate de 92.7 0.097 3.3E-06 50.2 4.8 35 21-55 6-40 (303)
282 2gv8_A Monooxygenase; FMO, FAD 92.7 0.089 3.1E-06 53.4 4.8 35 23-57 213-248 (447)
283 3lk7_A UDP-N-acetylmuramoylala 92.7 0.1 3.6E-06 53.1 5.3 35 22-56 9-43 (451)
284 1trb_A Thioredoxin reductase; 92.7 0.091 3.1E-06 50.2 4.6 36 23-58 146-181 (320)
285 3vtf_A UDP-glucose 6-dehydroge 92.7 0.11 3.8E-06 52.4 5.4 35 21-55 20-54 (444)
286 2q7v_A Thioredoxin reductase; 92.7 0.094 3.2E-06 50.4 4.7 36 23-58 153-188 (325)
287 3ghy_A Ketopantoate reductase 92.7 0.099 3.4E-06 50.9 4.9 33 22-54 3-35 (335)
288 2a87_A TRXR, TR, thioredoxin r 92.7 0.094 3.2E-06 50.7 4.7 36 23-58 156-191 (335)
289 3i83_A 2-dehydropantoate 2-red 92.6 0.1 3.5E-06 50.4 4.9 33 23-55 3-35 (320)
290 2izz_A Pyrroline-5-carboxylate 92.6 0.099 3.4E-06 50.6 4.8 41 15-55 15-59 (322)
291 1zcj_A Peroxisomal bifunctiona 92.5 0.14 4.7E-06 52.4 5.9 33 23-55 38-70 (463)
292 3hn2_A 2-dehydropantoate 2-red 92.5 0.1 3.6E-06 50.2 4.7 33 23-55 3-35 (312)
293 2cul_A Glucose-inhibited divis 92.5 0.3 1E-05 44.6 7.7 51 279-332 68-119 (232)
294 1ks9_A KPA reductase;, 2-dehyd 92.5 0.11 3.8E-06 49.0 4.9 33 24-56 2-34 (291)
295 2zbw_A Thioredoxin reductase; 92.4 0.092 3.1E-06 50.6 4.3 37 23-59 153-189 (335)
296 3l8k_A Dihydrolipoyl dehydroge 92.4 0.17 5.9E-06 51.6 6.4 40 22-61 172-211 (466)
297 2pv7_A T-protein [includes: ch 92.3 0.17 5.8E-06 48.4 5.9 33 24-56 23-56 (298)
298 3ntd_A FAD-dependent pyridine 92.3 0.11 3.7E-06 54.4 4.9 36 24-59 153-188 (565)
299 3urh_A Dihydrolipoyl dehydroge 92.2 0.11 3.9E-06 53.3 4.9 38 23-60 199-236 (491)
300 3qha_A Putative oxidoreductase 92.2 0.12 4.1E-06 49.4 4.7 35 22-56 15-49 (296)
301 2gf3_A MSOX, monomeric sarcosi 92.1 0.25 8.5E-06 48.6 7.1 37 22-58 3-39 (389)
302 4a7p_A UDP-glucose dehydrogena 92.1 0.13 4.6E-06 52.1 5.1 35 22-56 8-42 (446)
303 3g79_A NDP-N-acetyl-D-galactos 92.1 0.14 4.8E-06 52.4 5.2 34 23-56 19-54 (478)
304 2ew2_A 2-dehydropantoate 2-red 92.0 0.13 4.4E-06 49.2 4.8 33 23-55 4-36 (316)
305 3cty_A Thioredoxin reductase; 92.0 0.12 4E-06 49.6 4.5 36 23-58 156-191 (319)
306 3cgv_A Geranylgeranyl reductas 92.0 0.23 7.7E-06 49.0 6.7 52 279-332 102-156 (397)
307 3gg2_A Sugar dehydrogenase, UD 92.0 0.12 4.3E-06 52.4 4.8 33 23-55 3-35 (450)
308 3dk9_A Grase, GR, glutathione 92.0 0.13 4.5E-06 52.6 5.0 37 23-59 188-224 (478)
309 3oc4_A Oxidoreductase, pyridin 91.9 0.15 5E-06 51.9 5.2 38 23-60 148-185 (452)
310 3s5w_A L-ornithine 5-monooxyge 91.8 0.1 3.4E-06 53.1 3.9 36 22-57 227-264 (463)
311 3dfz_A SIRC, precorrin-2 dehyd 91.7 0.16 5.6E-06 46.3 4.8 35 20-54 29-63 (223)
312 3itj_A Thioredoxin reductase 1 91.7 0.14 4.8E-06 49.2 4.6 37 23-59 174-210 (338)
313 1q1r_A Putidaredoxin reductase 91.7 0.41 1.4E-05 48.2 8.2 37 22-58 4-42 (431)
314 1mv8_A GMD, GDP-mannose 6-dehy 91.6 0.14 4.8E-06 51.8 4.7 32 24-55 2-33 (436)
315 1mo9_A ORF3; nucleotide bindin 91.5 0.16 5.4E-06 52.7 5.0 38 23-60 215-252 (523)
316 3ab1_A Ferredoxin--NADP reduct 91.5 0.15 5E-06 49.9 4.5 37 23-59 164-200 (360)
317 2x5o_A UDP-N-acetylmuramoylala 91.5 0.11 3.7E-06 52.8 3.6 35 23-57 6-40 (439)
318 2uyy_A N-PAC protein; long-cha 91.3 0.21 7.2E-06 48.0 5.4 35 22-56 30-64 (316)
319 2weu_A Tryptophan 5-halogenase 91.3 0.44 1.5E-05 49.0 8.2 34 23-56 3-39 (511)
320 3mog_A Probable 3-hydroxybutyr 91.3 0.18 6.1E-06 51.8 5.0 34 22-55 5-38 (483)
321 1zej_A HBD-9, 3-hydroxyacyl-CO 91.3 0.18 6.1E-06 48.1 4.7 33 22-55 12-44 (293)
322 3dfu_A Uncharacterized protein 91.2 0.095 3.3E-06 48.1 2.7 33 22-54 6-38 (232)
323 2e4g_A Tryptophan halogenase; 91.2 0.46 1.6E-05 49.5 8.3 37 20-56 23-62 (550)
324 3ics_A Coenzyme A-disulfide re 91.1 0.2 6.8E-06 52.8 5.4 38 23-60 188-225 (588)
325 2x8g_A Thioredoxin glutathione 91.1 0.16 5.4E-06 53.6 4.6 32 23-54 287-318 (598)
326 3pid_A UDP-glucose 6-dehydroge 91.0 0.19 6.3E-06 50.7 4.7 33 23-56 37-69 (432)
327 3tl2_A Malate dehydrogenase; c 91.0 0.22 7.5E-06 48.0 5.1 37 18-54 4-41 (315)
328 1kyq_A Met8P, siroheme biosynt 91.0 0.11 3.8E-06 48.9 2.9 35 21-55 12-46 (274)
329 3lad_A Dihydrolipoamide dehydr 91.0 0.23 7.8E-06 50.7 5.5 37 23-59 181-217 (476)
330 3atr_A Conserved archaeal prot 90.9 0.42 1.4E-05 48.4 7.5 37 21-57 5-41 (453)
331 3g17_A Similar to 2-dehydropan 90.9 0.14 4.8E-06 48.8 3.7 33 23-55 3-35 (294)
332 1hyu_A AHPF, alkyl hydroperoxi 90.9 0.15 5.1E-06 52.9 4.1 36 23-58 356-391 (521)
333 3e8x_A Putative NAD-dependent 90.9 0.19 6.7E-06 45.7 4.5 35 21-55 20-55 (236)
334 4dio_A NAD(P) transhydrogenase 90.9 0.2 6.9E-06 49.9 4.8 34 23-56 191-224 (405)
335 2vns_A Metalloreductase steap3 90.8 0.22 7.5E-06 45.1 4.7 33 23-55 29-61 (215)
336 3gpi_A NAD-dependent epimerase 90.7 0.24 8.1E-06 46.6 5.0 34 23-56 4-37 (286)
337 1z82_A Glycerol-3-phosphate de 90.7 0.21 7.3E-06 48.5 4.8 32 23-54 15-46 (335)
338 3pef_A 6-phosphogluconate dehy 90.7 0.21 7.1E-06 47.3 4.6 33 24-56 3-35 (287)
339 3hwr_A 2-dehydropantoate 2-red 90.7 0.21 7.1E-06 48.2 4.6 33 22-55 19-51 (318)
340 4huj_A Uncharacterized protein 90.7 0.13 4.4E-06 46.8 3.0 35 21-55 22-57 (220)
341 2ewd_A Lactate dehydrogenase,; 90.6 0.22 7.4E-06 48.1 4.7 33 23-55 5-38 (317)
342 3f8d_A Thioredoxin reductase ( 90.6 0.21 7E-06 47.6 4.6 37 23-59 155-191 (323)
343 4dll_A 2-hydroxy-3-oxopropiona 90.6 0.24 8.2E-06 47.8 5.1 33 23-55 32-64 (320)
344 4g65_A TRK system potassium up 90.6 0.13 4.5E-06 52.4 3.3 34 22-55 3-36 (461)
345 3nix_A Flavoprotein/dehydrogen 90.6 0.43 1.5E-05 47.5 7.0 38 20-57 3-40 (421)
346 1lld_A L-lactate dehydrogenase 90.5 0.23 7.7E-06 47.8 4.7 33 23-55 8-42 (319)
347 2x3n_A Probable FAD-dependent 90.5 0.37 1.3E-05 47.7 6.5 37 21-57 5-41 (399)
348 3ojo_A CAP5O; rossmann fold, c 90.3 0.22 7.5E-06 50.2 4.6 33 24-56 13-45 (431)
349 2gmh_A Electron transfer flavo 90.2 0.62 2.1E-05 49.0 8.2 53 279-332 144-211 (584)
350 3l6d_A Putative oxidoreductase 90.2 0.3 1E-05 46.8 5.3 34 22-55 9-42 (306)
351 3iwa_A FAD-dependent pyridine 90.2 0.6 2.1E-05 47.5 7.9 38 21-58 2-41 (472)
352 2vdc_G Glutamate synthase [NAD 90.2 0.25 8.6E-06 50.3 5.0 36 22-57 264-300 (456)
353 2zyd_A 6-phosphogluconate dehy 90.2 0.24 8.2E-06 50.8 4.8 36 20-55 13-48 (480)
354 3r9u_A Thioredoxin reductase; 90.1 0.25 8.5E-06 46.8 4.6 35 23-57 148-182 (315)
355 1t2d_A LDH-P, L-lactate dehydr 90.1 0.3 1E-05 47.2 5.2 33 23-55 5-38 (322)
356 3ggo_A Prephenate dehydrogenas 90.0 0.33 1.1E-05 46.7 5.4 33 23-55 34-68 (314)
357 3oj0_A Glutr, glutamyl-tRNA re 90.0 0.14 4.8E-06 43.0 2.4 33 23-55 22-54 (144)
358 1jay_A Coenzyme F420H2:NADP+ o 89.9 0.27 9.3E-06 44.0 4.5 32 24-55 2-34 (212)
359 3ktd_A Prephenate dehydrogenas 89.9 0.31 1.1E-05 47.5 5.2 33 23-55 9-41 (341)
360 3lzw_A Ferredoxin--NADP reduct 89.9 0.27 9.2E-06 47.0 4.7 37 23-59 155-191 (332)
361 1fec_A Trypanothione reductase 89.9 0.65 2.2E-05 47.6 7.9 43 21-63 2-53 (490)
362 2wpf_A Trypanothione reductase 89.8 0.7 2.4E-05 47.4 8.1 43 21-63 6-57 (495)
363 3dgz_A Thioredoxin reductase 2 89.8 0.3 1E-05 50.0 5.3 34 23-56 186-219 (488)
364 4gwg_A 6-phosphogluconate dehy 89.8 0.3 1E-05 50.0 5.1 35 21-55 3-37 (484)
365 2cdu_A NADPH oxidase; flavoenz 89.8 0.84 2.9E-05 46.1 8.5 37 23-59 1-39 (452)
366 3p2y_A Alanine dehydrogenase/p 89.7 0.21 7.2E-06 49.3 3.8 33 23-55 185-217 (381)
367 3pdu_A 3-hydroxyisobutyrate de 89.7 0.22 7.5E-06 47.2 3.8 33 24-56 3-35 (287)
368 3l9w_A Glutathione-regulated p 89.7 0.28 9.7E-06 49.2 4.8 34 23-56 5-38 (413)
369 1dlj_A UDP-glucose dehydrogena 89.7 0.25 8.4E-06 49.4 4.4 31 24-55 2-32 (402)
370 1m6i_A Programmed cell death p 89.6 0.86 2.9E-05 46.7 8.5 39 20-58 9-49 (493)
371 3o0h_A Glutathione reductase; 89.6 0.74 2.5E-05 47.0 8.0 42 21-63 25-66 (484)
372 1evy_A Glycerol-3-phosphate de 89.6 0.21 7.3E-06 49.1 3.8 32 24-55 17-48 (366)
373 2h78_A Hibadh, 3-hydroxyisobut 89.5 0.3 1E-05 46.5 4.7 33 23-55 4-36 (302)
374 2q3e_A UDP-glucose 6-dehydroge 89.5 0.27 9.2E-06 50.2 4.5 33 23-55 6-40 (467)
375 2hjr_A Malate dehydrogenase; m 89.4 0.34 1.2E-05 46.9 5.0 33 23-55 15-48 (328)
376 2qyt_A 2-dehydropantoate 2-red 89.4 0.22 7.4E-06 47.7 3.6 31 23-53 9-45 (317)
377 2v6b_A L-LDH, L-lactate dehydr 89.4 0.31 1.1E-05 46.6 4.7 32 24-55 2-35 (304)
378 1txg_A Glycerol-3-phosphate de 89.4 0.23 8E-06 47.9 3.9 30 24-53 2-31 (335)
379 3ego_A Probable 2-dehydropanto 89.4 0.32 1.1E-05 46.7 4.7 32 23-55 3-34 (307)
380 3c4n_A Uncharacterized protein 89.3 0.19 6.5E-06 50.2 3.2 40 21-60 35-76 (405)
381 1x0v_A GPD-C, GPDH-C, glycerol 89.3 0.2 6.8E-06 49.0 3.3 35 22-56 8-49 (354)
382 3qfa_A Thioredoxin reductase 1 89.2 0.44 1.5E-05 49.3 6.0 33 23-55 211-243 (519)
383 2o3j_A UDP-glucose 6-dehydroge 89.1 0.33 1.1E-05 49.8 4.9 33 23-55 10-44 (481)
384 2qcu_A Aerobic glycerol-3-phos 89.1 0.76 2.6E-05 47.2 7.7 40 20-59 1-40 (501)
385 2ywl_A Thioredoxin reductase r 89.1 0.91 3.1E-05 39.2 7.2 50 279-333 56-105 (180)
386 3eag_A UDP-N-acetylmuramate:L- 89.1 0.34 1.2E-05 46.9 4.7 34 23-56 5-39 (326)
387 2rcy_A Pyrroline carboxylate r 89.0 0.33 1.1E-05 45.1 4.5 35 22-56 4-42 (262)
388 3fbs_A Oxidoreductase; structu 88.9 0.33 1.1E-05 45.5 4.5 33 23-56 142-174 (297)
389 2gqf_A Hypothetical protein HI 88.9 0.89 3E-05 45.3 7.8 60 271-332 101-162 (401)
390 2aqj_A Tryptophan halogenase, 88.8 0.78 2.7E-05 47.6 7.6 38 20-57 3-43 (538)
391 3cky_A 2-hydroxymethyl glutara 88.8 0.37 1.3E-05 45.8 4.8 33 23-55 5-37 (301)
392 4b1b_A TRXR, thioredoxin reduc 88.7 0.43 1.5E-05 49.7 5.5 37 23-59 224-260 (542)
393 2bs2_A Quinol-fumarate reducta 88.7 0.94 3.2E-05 48.3 8.3 42 20-61 3-44 (660)
394 2e1m_B L-glutamate oxidase; L- 88.7 0.17 5.7E-06 41.9 1.9 53 323-377 4-57 (130)
395 3e1t_A Halogenase; flavoprotei 88.6 0.85 2.9E-05 46.9 7.7 38 20-57 5-42 (512)
396 4dna_A Probable glutathione re 88.6 0.77 2.6E-05 46.6 7.2 42 21-63 4-45 (463)
397 1xdi_A RV3303C-LPDA; reductase 88.5 1 3.5E-05 46.2 8.1 41 22-63 2-45 (499)
398 1nyt_A Shikimate 5-dehydrogena 88.4 0.51 1.7E-05 44.3 5.4 32 23-54 120-151 (271)
399 1cjc_A Protein (adrenodoxin re 88.4 0.36 1.2E-05 49.2 4.6 35 23-57 146-201 (460)
400 1guz_A Malate dehydrogenase; o 88.4 0.41 1.4E-05 45.9 4.8 32 24-55 2-35 (310)
401 3dgh_A TRXR-1, thioredoxin red 88.3 0.44 1.5E-05 48.7 5.2 33 23-55 188-220 (483)
402 2iz1_A 6-phosphogluconate dehy 88.3 0.44 1.5E-05 48.7 5.2 34 22-55 5-38 (474)
403 2h88_A Succinate dehydrogenase 88.3 0.91 3.1E-05 48.0 7.7 42 20-61 16-57 (621)
404 2f1k_A Prephenate dehydrogenas 88.2 0.44 1.5E-05 44.7 4.8 32 24-55 2-33 (279)
405 4ezb_A Uncharacterized conserv 88.2 0.36 1.2E-05 46.5 4.2 33 23-55 25-58 (317)
406 2wdq_A Succinate dehydrogenase 88.1 1 3.4E-05 47.4 7.9 42 20-61 5-46 (588)
407 1x13_A NAD(P) transhydrogenase 88.1 0.39 1.3E-05 48.0 4.5 33 23-55 173-205 (401)
408 2pyx_A Tryptophan halogenase; 88.0 1.1 3.9E-05 46.2 8.2 37 21-57 6-54 (526)
409 4ffl_A PYLC; amino acid, biosy 88.0 0.43 1.5E-05 46.7 4.7 33 24-56 3-35 (363)
410 3gvi_A Malate dehydrogenase; N 88.0 0.5 1.7E-05 45.7 5.0 36 20-55 5-41 (324)
411 2zxi_A TRNA uridine 5-carboxym 87.9 1 3.5E-05 47.6 7.7 38 21-58 26-64 (637)
412 2gf2_A Hibadh, 3-hydroxyisobut 87.9 0.46 1.6E-05 44.9 4.8 32 24-55 2-33 (296)
413 1yqg_A Pyrroline-5-carboxylate 87.7 0.4 1.4E-05 44.5 4.1 32 24-55 2-34 (263)
414 3tri_A Pyrroline-5-carboxylate 87.7 0.55 1.9E-05 44.3 5.1 34 22-55 3-39 (280)
415 2aef_A Calcium-gated potassium 87.7 0.24 8.2E-06 45.3 2.5 32 23-55 10-41 (234)
416 1jw9_B Molybdopterin biosynthe 87.6 0.42 1.4E-05 44.3 4.1 33 23-55 32-65 (249)
417 2wtb_A MFP2, fatty acid multif 87.6 0.41 1.4E-05 51.7 4.6 33 23-55 313-345 (725)
418 3orf_A Dihydropteridine reduct 87.4 0.55 1.9E-05 43.3 4.8 45 10-56 12-57 (251)
419 3i3l_A Alkylhalidase CMLS; fla 87.3 0.73 2.5E-05 48.5 6.2 40 20-59 21-60 (591)
420 1w6u_A 2,4-dienoyl-COA reducta 87.3 0.95 3.2E-05 42.8 6.6 46 10-55 14-60 (302)
421 1l7d_A Nicotinamide nucleotide 87.2 0.51 1.8E-05 46.8 4.8 33 23-55 173-205 (384)
422 3p7m_A Malate dehydrogenase; p 87.2 0.61 2.1E-05 45.0 5.2 36 20-55 3-39 (321)
423 1vpd_A Tartronate semialdehyde 87.2 0.52 1.8E-05 44.7 4.7 33 23-55 6-38 (299)
424 2pgd_A 6-phosphogluconate dehy 87.2 0.54 1.8E-05 48.2 5.0 33 23-55 3-35 (482)
425 2p4q_A 6-phosphogluconate dehy 87.1 0.54 1.8E-05 48.3 5.0 33 23-55 11-43 (497)
426 1hdo_A Biliverdin IX beta redu 87.0 0.61 2.1E-05 41.0 4.8 33 23-55 4-37 (206)
427 3c24_A Putative oxidoreductase 87.0 0.52 1.8E-05 44.5 4.5 33 23-55 12-45 (286)
428 2eez_A Alanine dehydrogenase; 87.0 0.51 1.7E-05 46.5 4.6 33 23-55 167-199 (369)
429 1pjc_A Protein (L-alanine dehy 87.0 0.52 1.8E-05 46.3 4.6 33 23-55 168-200 (361)
430 2pzm_A Putative nucleotide sug 87.0 0.68 2.3E-05 44.5 5.4 42 14-55 12-54 (330)
431 1a5z_A L-lactate dehydrogenase 86.9 0.46 1.6E-05 45.8 4.1 32 24-55 2-35 (319)
432 2g5c_A Prephenate dehydrogenas 86.8 0.57 1.9E-05 44.0 4.6 32 24-55 3-36 (281)
433 3ew7_A LMO0794 protein; Q8Y8U8 86.8 0.6 2.1E-05 41.6 4.6 32 24-55 2-34 (221)
434 2gag_A Heterotetrameric sarcos 86.7 0.33 1.1E-05 54.3 3.4 37 23-59 285-321 (965)
435 3ius_A Uncharacterized conserv 86.7 0.51 1.8E-05 44.1 4.3 33 23-55 6-38 (286)
436 3k31_A Enoyl-(acyl-carrier-pro 86.7 0.88 3E-05 43.1 6.0 36 20-55 28-66 (296)
437 1o94_A Tmadh, trimethylamine d 86.7 0.46 1.6E-05 51.4 4.4 36 23-59 529-566 (729)
438 1pgj_A 6PGDH, 6-PGDH, 6-phosph 86.6 0.56 1.9E-05 48.0 4.8 32 24-55 3-34 (478)
439 1y6j_A L-lactate dehydrogenase 86.6 0.63 2.2E-05 44.8 4.9 34 22-55 7-42 (318)
440 3pqe_A L-LDH, L-lactate dehydr 86.6 0.6 2E-05 45.2 4.7 33 22-54 5-39 (326)
441 1rp0_A ARA6, thiazole biosynth 86.4 1.4 4.8E-05 41.4 7.2 52 279-332 119-185 (284)
442 2a9f_A Putative malic enzyme ( 86.3 0.6 2E-05 46.1 4.5 35 21-55 187-222 (398)
443 1ur5_A Malate dehydrogenase; o 86.3 0.64 2.2E-05 44.6 4.7 33 23-55 3-36 (309)
444 3h2s_A Putative NADH-flavin re 86.3 0.66 2.3E-05 41.5 4.6 32 24-55 2-34 (224)
445 3phh_A Shikimate dehydrogenase 86.2 0.69 2.4E-05 43.4 4.8 34 22-55 118-151 (269)
446 1yj8_A Glycerol-3-phosphate de 86.2 0.42 1.4E-05 47.2 3.5 33 24-56 23-62 (375)
447 1edz_A 5,10-methylenetetrahydr 86.2 0.77 2.6E-05 44.1 5.2 34 21-54 176-210 (320)
448 4b4o_A Epimerase family protei 86.1 0.74 2.5E-05 43.5 5.1 34 24-57 2-36 (298)
449 1np3_A Ketol-acid reductoisome 86.0 0.67 2.3E-05 45.1 4.8 33 23-55 17-49 (338)
450 1wdk_A Fatty oxidation complex 86.0 0.47 1.6E-05 51.2 4.0 32 24-55 316-347 (715)
451 3c7a_A Octopine dehydrogenase; 86.0 0.39 1.3E-05 47.9 3.2 30 23-52 3-33 (404)
452 1pjq_A CYSG, siroheme synthase 85.9 0.58 2E-05 47.6 4.4 34 21-54 11-44 (457)
453 2cvz_A Dehydrogenase, 3-hydrox 85.9 0.63 2.2E-05 43.7 4.4 31 24-55 3-33 (289)
454 1vl6_A Malate oxidoreductase; 85.9 0.65 2.2E-05 45.7 4.5 34 21-54 191-225 (388)
455 1p77_A Shikimate 5-dehydrogena 85.8 0.6 2.1E-05 43.8 4.2 33 23-55 120-152 (272)
456 1w4x_A Phenylacetone monooxyge 85.8 0.64 2.2E-05 48.3 4.8 35 22-56 186-220 (542)
457 3ces_A MNMG, tRNA uridine 5-ca 85.8 1.2 4.2E-05 47.1 7.0 51 279-332 124-175 (651)
458 2egg_A AROE, shikimate 5-dehyd 85.7 0.86 2.9E-05 43.4 5.3 33 23-55 142-175 (297)
459 1k0i_A P-hydroxybenzoate hydro 85.6 0.84 2.9E-05 44.9 5.4 52 279-332 103-157 (394)
460 1hyh_A L-hicdh, L-2-hydroxyiso 85.6 0.57 2E-05 44.9 4.0 32 24-55 3-36 (309)
461 2vhw_A Alanine dehydrogenase; 85.5 0.68 2.3E-05 45.8 4.6 33 23-55 169-201 (377)
462 2ahr_A Putative pyrroline carb 85.4 0.73 2.5E-05 42.7 4.6 33 23-55 4-36 (259)
463 3dhn_A NAD-dependent epimerase 85.4 0.62 2.1E-05 41.8 4.0 33 23-55 5-38 (227)
464 3d1l_A Putative NADP oxidoredu 85.3 0.65 2.2E-05 43.2 4.2 33 23-55 11-44 (266)
465 4id9_A Short-chain dehydrogena 85.3 0.74 2.5E-05 44.4 4.7 37 21-57 18-55 (347)
466 1gte_A Dihydropyrimidine dehyd 85.2 0.64 2.2E-05 52.3 4.7 33 24-56 334-367 (1025)
467 1kf6_A Fumarate reductase flav 85.0 1.5 5.1E-05 46.2 7.2 40 21-60 4-45 (602)
468 3gt0_A Pyrroline-5-carboxylate 85.0 0.85 2.9E-05 42.0 4.8 32 24-55 4-39 (247)
469 3k30_A Histamine dehydrogenase 84.8 0.62 2.1E-05 50.0 4.3 39 23-61 524-564 (690)
470 2hk9_A Shikimate dehydrogenase 84.3 0.73 2.5E-05 43.3 4.1 34 22-55 129-162 (275)
471 4gbj_A 6-phosphogluconate dehy 84.3 0.7 2.4E-05 44.0 3.9 33 24-56 7-39 (297)
472 2d5c_A AROE, shikimate 5-dehyd 84.2 1.2 4E-05 41.5 5.4 32 24-55 118-149 (263)
473 3ond_A Adenosylhomocysteinase; 84.2 0.86 3E-05 46.4 4.7 34 22-55 265-298 (488)
474 3b1f_A Putative prephenate deh 84.2 0.75 2.6E-05 43.4 4.1 34 22-55 6-41 (290)
475 1ff9_A Saccharopine reductase; 84.2 0.84 2.9E-05 46.3 4.7 33 23-55 4-36 (450)
476 2rir_A Dipicolinate synthase, 84.2 1.2 4.1E-05 42.4 5.5 35 21-55 156-190 (300)
477 2qa1_A PGAE, polyketide oxygen 84.2 1.9 6.4E-05 44.3 7.4 53 279-334 106-162 (500)
478 1n4w_A CHOD, cholesterol oxida 84.1 1.2 4E-05 45.8 5.8 56 278-333 220-283 (504)
479 3gvx_A Glycerate dehydrogenase 84.1 1.5 5.2E-05 41.5 6.1 47 8-56 110-156 (290)
480 4a9w_A Monooxygenase; baeyer-v 84.0 2.2 7.7E-05 40.7 7.6 51 279-332 76-126 (357)
481 3zwc_A Peroxisomal bifunctiona 84.0 1.2 4.2E-05 48.0 6.0 34 23-56 317-350 (742)
482 3abi_A Putative uncharacterize 83.9 0.81 2.8E-05 44.9 4.3 36 18-54 12-47 (365)
483 1nvt_A Shikimate 5'-dehydrogen 83.9 1 3.5E-05 42.6 4.9 31 23-54 129-159 (287)
484 2ekl_A D-3-phosphoglycerate de 83.9 1.8 6.1E-05 41.5 6.7 38 19-56 139-176 (313)
485 3dqp_A Oxidoreductase YLBE; al 83.8 0.83 2.8E-05 40.9 4.0 32 24-55 2-34 (219)
486 1wwk_A Phosphoglycerate dehydr 83.8 1.9 6.3E-05 41.3 6.7 49 8-56 128-176 (307)
487 1i36_A Conserved hypothetical 83.7 0.83 2.8E-05 42.4 4.1 30 24-53 2-31 (264)
488 3ek2_A Enoyl-(acyl-carrier-pro 83.5 1 3.5E-05 41.7 4.7 36 20-55 12-50 (271)
489 2qa2_A CABE, polyketide oxygen 83.5 2 6.8E-05 44.1 7.2 53 279-334 107-163 (499)
490 3d4o_A Dipicolinate synthase s 83.3 1 3.4E-05 42.8 4.5 34 22-55 155-188 (293)
491 2gcg_A Glyoxylate reductase/hy 83.3 1.5 5.3E-05 42.3 6.0 37 19-55 152-188 (330)
492 1yb4_A Tartronic semialdehyde 83.3 0.77 2.6E-05 43.3 3.8 31 24-55 5-35 (295)
493 2we8_A Xanthine dehydrogenase; 83.2 1.2 4E-05 44.1 5.1 36 22-57 204-239 (386)
494 3fi9_A Malate dehydrogenase; s 83.2 1.2 4E-05 43.4 5.0 35 21-55 7-44 (343)
495 3o38_A Short chain dehydrogena 83.1 1.6 5.6E-05 40.3 5.9 34 22-55 22-57 (266)
496 2qrj_A Saccharopine dehydrogen 83.0 0.79 2.7E-05 45.3 3.7 40 22-61 214-258 (394)
497 2dbq_A Glyoxylate reductase; D 83.0 2 6.7E-05 41.6 6.6 37 20-56 148-184 (334)
498 1oju_A MDH, malate dehydrogena 82.9 0.93 3.2E-05 43.1 4.1 32 24-55 2-35 (294)
499 3i6i_A Putative leucoanthocyan 82.9 1.1 3.7E-05 43.3 4.7 36 20-55 8-44 (346)
500 1lqt_A FPRA; NADP+ derivative, 82.8 0.97 3.3E-05 45.9 4.5 35 23-57 148-203 (456)
No 1
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=2.5e-58 Score=487.46 Aligned_cols=417 Identities=30% Similarity=0.509 Sum_probs=324.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCC-------C----------
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSS-------V---------- 82 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~-------~---------- 82 (486)
+.+|||+|||+|+.|++.|+.|++.|++|+|+|+|++|||.+.++++.++.+|+........ .
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEA 85 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEEE
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchhh
Confidence 34799999999999999999999999999999999999999999999999999876542100 0
Q ss_pred ----CCCCcccccccccc--------------------------------------------------------------
Q 011414 83 ----CPDPLYSDVEISNY-------------------------------------------------------------- 96 (486)
Q Consensus 83 ----~~~~~~~~~~~~~~-------------------------------------------------------------- 96 (486)
.....+.+.++.++
T Consensus 86 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (650)
T 1vg0_A 86 IPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPG 165 (650)
T ss_dssp EEBCSSCCCEEEEEEEECSCC-----------------------------------------------------------
T ss_pred ccccccccccccceeEeecccccccchhhccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00000000000000
Q ss_pred ------------------------------------------ccc-----cccCCCCceEeecCCCEEEecChHHHHHHH
Q 011414 97 ------------------------------------------ASR-----LLSQHPRNFNLDVSGPRVLFCADHAVDLML 129 (486)
Q Consensus 97 ------------------------------------------~~~-----~~~~~~~~~~idl~Gp~ll~~~~~l~~~l~ 129 (486)
... .+.+..|+|+||+ ||+++++++.++++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL-~PklL~~~g~lv~LL~ 244 (650)
T 1vg0_A 166 PESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDL-VSKLLYSRGLLIDLLI 244 (650)
T ss_dssp ---------------------------------------------CCCHHHHHHTGGGCCEES-SCCCEESSSHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEee-CCeeeeCCcHHHHHHH
Confidence 000 0112579999999 5999999999999999
Q ss_pred hcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCChHhHHHHHHHHHHHHhhcccCccccccccccccccCCc
Q 011414 130 KSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSP 209 (486)
Q Consensus 130 ~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s 209 (486)
++|+.+|++|+.++..|++. +|+++++|+++.++|+++.+++.+|+.+|+|++.+..+.. .+ .....+..+|
T Consensus 245 ~sgV~~yLEFk~v~~~y~~~-~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p------~~~~~~d~~S 316 (650)
T 1vg0_A 245 KSNVSRYAEFKNITRILAFR-EGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HP------DEYRAYEGTT 316 (650)
T ss_dssp HHTGGGGCCEEECCEEEEES-SSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CH------HHHHTTTTSB
T ss_pred HcCCcceeeEEEccceEEec-CCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-Ch------HHHhhhccCC
Confidence 99999999999999988874 8889999999999999999999999999999999887532 11 0123456789
Q ss_pred HHHHHHhcCCChHHHHHHHHHHhhccCCchhhhhhhchhhHHHHHHHHHHhhhcccCCCcceEeecCCcchHHHHHHHHH
Q 011414 210 FAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRA 289 (486)
Q Consensus 210 ~~~~l~~~~l~~~l~~~l~~~i~~~~~~~~~~~~~~s~~~~l~~~~~~~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~ 289 (486)
+.+||+++++++.++.++.+++++..... .++..++.++..|+.++++||.+ +++||+||+++|+|+|||++
T Consensus 317 ~~d~L~~~~ls~~L~~~L~~~lal~~~~~------~pa~~~l~~i~~~l~sl~~yg~s--g~~yp~GG~g~L~qaL~r~~ 388 (650)
T 1vg0_A 317 FSEYLKTQKLTPNLQYFVLHSIAMTSETT------SCTVDGLKATKKFLQCLGRYGNT--PFLFPLYGQGELPQCFCRMC 388 (650)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHTTC--CCS------CBHHHHHHHHHHHHHHTTSSSSS--SEEEETTCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHhccCCCC------CchhHHHHHHHHHHHHHHhhccC--ceEEeCCchhHHHHHHHHHH
Confidence 99999999999999999887766643321 24566777788899999888863 48999999999999999999
Q ss_pred HHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECCCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEE
Q 011414 290 AVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGI 369 (486)
Q Consensus 290 ~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i 369 (486)
+++||+|+|+++|++|.++.++|++++|++.+|++++|++||++|.++ +... . .+...++++|++
T Consensus 389 ~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~l-p~~~---~-----------~~~~~~~v~R~i 453 (650)
T 1vg0_A 389 AVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYL-SENT---C-----------SRVQYRQISRAV 453 (650)
T ss_dssp HHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGB-CTTT---T-----------TTCCCEEEEEEE
T ss_pred HHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhc-CHhH---h-----------ccccccceEEEE
Confidence 999999999999999998821188999988889999999999988775 3211 0 111246799999
Q ss_pred EEecCCCCCCC---CceEEEeCCCCCCCCCCceEEEEEeCCCCccCCCCeEEEEEEEeeccCcchHHHHHHHHHHHHhhh
Q 011414 370 CITRSSLKPDL---SNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGMFVLYFSALCDEVNQGKKLLHAALSALQKLL 446 (486)
Q Consensus 370 ~i~~~~~~~~~---~~~~~~~p~~~~~~~~~~~v~v~~~~~~~~~~P~G~~vi~~~t~~~~~~~~~~~l~~~~~~l~~~~ 446 (486)
+|+++|+.+.. ...++++|+.+ + ..++||++++|++++.||+|++|+|+++.. ..+++++|++++++|+...
T Consensus 454 ~i~~~pi~~~~~~~~~~~iiiP~~~-g--~~~~V~i~~~Ss~~~~cP~G~~Vv~lst~~--~~~~~~eLe~~l~~L~~~~ 528 (650)
T 1vg0_A 454 LITDGSVLRTDADQQVSILTVPAEE-P--GSFAVRVIELCSSTMTCMKGTYLVHLTCMS--SKTAREDLERVVQKLFTPY 528 (650)
T ss_dssp EEESSCSSCCSCCCCCEEEEECCSS-T--TSCCEEEEEECGGGTSSCTTCEEEEEEEEC--SSCHHHHHHHHHHHHCBSC
T ss_pred EEecCCCCCcCCCcceEEEEccCcc-C--CCCCEEEEEeCCCCCCCCCCCEEEEEEeec--CCCHHHHHHHHHHHHhccc
Confidence 99999986532 45788888765 2 367899999999999999999999999873 3588999999999998531
Q ss_pred hcCCCCCCCCccccccccCCcceEeEEeEEeecCc
Q 011414 447 VTGTAGNSSTAQSEDMEEAKPTLLWSALYIQDLSL 481 (486)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 481 (486)
.+++.++.+.++|+|||++||+|.+..
T Consensus 529 --------~~~~~~~~~~~~~~vLws~~~~~~~~~ 555 (650)
T 1vg0_A 529 --------TEIEAENEQVEKPRLLWALYFNMRDSS 555 (650)
T ss_dssp --------SCCC-------CCBEEEEEEEEEEECT
T ss_pred --------cccccccccccCCceEEEEEEEeeccc
Confidence 122233445679999999999998765
No 2
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.5e-55 Score=449.78 Aligned_cols=378 Identities=24% Similarity=0.426 Sum_probs=309.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (486)
++++|||||||||++|+++|+.|+++|++|+|+|+++++||++++++..++..|+..+. ++ .
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~-~~-----------------~ 78 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKE-NI-----------------P 78 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTS-CC-----------------C
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCC-Cc-----------------c
Confidence 45679999999999999999999999999999999999999999999887666654321 11 0
Q ss_pred ccccCCCCceEeecCCCEEEecChHHHHHHHhcCcccccchhcccceeeec--------cCCceeecCCCHHHHhhcccC
Q 011414 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLD--------ADAKLCSVPDSRAAIFKDKSL 170 (486)
Q Consensus 99 ~~~~~~~~~~~idl~Gp~ll~~~~~l~~~l~~~~~~~y~ef~~~~~~~~~~--------~~g~~~~vp~s~~~~f~~~~l 170 (486)
+.+ ...|+|++|+. |+++++.+.++++|.++++.+|++|+.++..|++. ++|+++++|+++.++|+++.+
T Consensus 79 ~~~-g~~R~y~iDL~-P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lL 156 (475)
T 3p1w_A 79 SKY-GENRHWNVDLI-PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLL 156 (475)
T ss_dssp GGG-CCGGGCCEESS-CCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTS
T ss_pred ccc-ccccceEEeec-CeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCC
Confidence 122 36789999995 99999999999999999999999999999998764 257899999999999999999
Q ss_pred ChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHHhhccCCchhhhhhhchhhH
Q 011414 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (486)
Q Consensus 171 ~~~~k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i~~~~~~~~~~~~~~s~~~~ 250 (486)
++.+|+++|+|+..+.++....+.. .. ..+....|+.+|++++++++.+++++.+++++.... +. ...++.++
T Consensus 157 s~~eK~~l~kFL~~l~~~~~~~~~~---~~-~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~-~~--~~~~a~~~ 229 (475)
T 3p1w_A 157 SLMEKNRCKNFYQYVSEWDANKRNT---WD-NLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLND-DY--LKQPAYLT 229 (475)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTCGGG---ST-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSS-GG--GGSBHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhccchh---hh-cccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCC-Cc--ccCCHHHH
Confidence 9999999999999987764221110 00 012346899999999999999999887877665321 11 12477888
Q ss_pred HHHHHHHHHhhhcccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEE
Q 011414 251 INRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKL 330 (486)
Q Consensus 251 l~~~~~~~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~V 330 (486)
+.++..|+.|+++||.+ +++||+||+++|+++|+|.++++||+|+++++|++|..+ ++|++++|++.+|++++||+|
T Consensus 230 l~ri~~y~~Sl~~yg~s--~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d-~~g~v~gV~~~~G~~i~Ad~V 306 (475)
T 3p1w_A 230 LERIKLYMQSISAFGKS--PFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFD-DDNKVCGIKSSDGEIAYCDKV 306 (475)
T ss_dssp HHHHHHHHHHHHHHSSC--SEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEE
T ss_pred HHHHHHHHHHHhhcCCC--ceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEe-cCCeEEEEEECCCcEEECCEE
Confidence 99999999999999854 489999999999999999999999999999999999983 278889999999999999999
Q ss_pred EECCCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCC--CCCceEEEeCCCCCCCCCCceEEEEEeCCC
Q 011414 331 VLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGN 408 (486)
Q Consensus 331 I~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~--~~~~~~~~~p~~~~~~~~~~~v~v~~~~~~ 408 (486)
|+++++.. .+ + +. ....+.++|+|+|+++|+.. +..+++++||+.+++ ..++||++++|++
T Consensus 307 I~a~~~~~-~~--p------~~------~~~~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~~~~--~~~~iy~~~~s~~ 369 (475)
T 3p1w_A 307 ICDPSYVM-HL--K------NK------IKKIGQVIRCICILSNPIPETNQTNSCQIIIPQNQLN--RKSDIYINLVSFQ 369 (475)
T ss_dssp EECGGGCT-TS--T------TS------EEEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGGT--SSSCEEEEEEEGG
T ss_pred EECCCccc-cC--c------cc------ccccceEEEEEEEEeccCcccCCCceEEEEeCCcccC--CCCCEEEEEECCC
Confidence 99887641 11 1 00 01246799999999999966 335778999987764 3678999999999
Q ss_pred CccCCCCeEEEEEEEeeccCcchHHHHHHHHHHHHh
Q 011414 409 LAVCPLGMFVLYFSALCDEVNQGKKLLHAALSALQK 444 (486)
Q Consensus 409 ~~~~P~G~~vi~~~t~~~~~~~~~~~l~~~~~~l~~ 444 (486)
+++||+|+||+|+||..++ .+++++|++++++|..
T Consensus 370 ~~~cp~G~~i~~~st~~e~-~~~~~~l~~~l~~l~~ 404 (475)
T 3p1w_A 370 HGVTLKGKYIAIVSATVET-NNPIKEIEKPLELLGT 404 (475)
T ss_dssp GTSSCTTCEEEEEEEECCS-SCHHHHTHHHHHTTCS
T ss_pred cCcCCCCcEEEEEEeecCC-CCHHHHHHHHHHHhcc
Confidence 9999999999999998865 5899999999999984
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=7.3e-41 Score=347.77 Aligned_cols=376 Identities=24% Similarity=0.479 Sum_probs=281.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (486)
+.++||||||||++||+||++|+++|++|+|||+++++||+++|++.++...++..... . ..+. ..
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~-~---------~~~~----~~ 74 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPI-S---------KEER----ES 74 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCC-C---------HHHH----HH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCc-c---------ccCc----ch
Confidence 35799999999999999999999999999999999999999999988763222211100 0 0000 00
Q ss_pred cccCCCCceEeecCCCEEEecChHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCChHhHHHHH
Q 011414 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (486)
Q Consensus 100 ~~~~~~~~~~idl~Gp~ll~~~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l~ 179 (486)
.+ ...+.|.+++ +|++++..+.+.++|.++|+.+|++|..++..|.+. +|+.+++|.++.+.+.+..+++.+|+.++
T Consensus 75 ~~-~~g~~~~~~l-~P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~~ 151 (453)
T 2bcg_G 75 KF-GKDRDWNVDL-IPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK-QGKIYKVPANEIEAISSPLMGIFEKRRMK 151 (453)
T ss_dssp HH-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE-TTEEEECCSSHHHHHHCTTSCHHHHHHHH
T ss_pred hc-ccccceeecc-ccceeecCcHHHHHHHhcCCccceEEEEccceeEEe-CCeEEECCCChHHHHhhhccchhhHHHHH
Confidence 01 1235688899 499999999999999999999999999998878764 88999999997788888888888999999
Q ss_pred HHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHHhhccCCchhhhhhhchhhHHHHHHHHHH
Q 011414 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNS 259 (486)
Q Consensus 180 ~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i~~~~~~~~~~~~~~s~~~~l~~~~~~~~ 259 (486)
+|+..+..+....+.. .. ..+....|+.+|++++++++.+++++.+.+.+....... ..++..++.++..|+.
T Consensus 152 ~~~~~~~~~~~~~p~~---~~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~---~~p~~~~~~~~~~~~~ 224 (453)
T 2bcg_G 152 KFLEWISSYKEDDLST---HQ-GLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYL---QQPARPSFERILLYCQ 224 (453)
T ss_dssp HHHHHHHHCBTTBGGG---ST-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGG---GSBHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCchh---hh-ccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCcccc---CCchHHHHHHHHHHHH
Confidence 9999887654221110 00 012457899999999999999999887665543211000 0144556666677887
Q ss_pred hhhcccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECCCCCCC
Q 011414 260 SIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVP 339 (486)
Q Consensus 260 s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p~~~~~ 339 (486)
++++++. +++.||+||+++|+++|++.+++.|++|+++++|++|..+.+++++++|++ +|++++||+||+++.....
T Consensus 225 s~~~~~~--~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 225 SVARYGK--SPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHSS--CSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHhhcC--CceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 8777764 347799999999999999999999999999999999987521467778886 6889999999986543211
Q ss_pred CCCcccchhhhhhhhhhccCCCcc-eEEEEEEEecCCCCC--CCCceEEEeCCCCCCCCCCceEEEEEeCCCCccCCCCe
Q 011414 340 GSLASSHQQLQESFQAFSLSDNKG-KVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (486)
Q Consensus 340 ~l~~~~~~~l~~~~~~l~~~~~~~-~v~r~i~i~~~~~~~--~~~~~~~~~p~~~~~~~~~~~v~v~~~~~~~~~~P~G~ 416 (486)
++ . ... ...+++++++++++. ...+..+++|....+ .++.+|+.+.+..++.||+|+
T Consensus 302 ~l--------~----------~~~~~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~--~~~~~~v~~~s~~d~~aP~G~ 361 (453)
T 2bcg_G 302 KC--------K----------STGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLG--RKSDIYVAIVSDAHNVCSKGH 361 (453)
T ss_dssp GE--------E----------EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTT--CSSCEEEEEEEGGGTSSCTTC
T ss_pred hh--------c----------ccCCcceeEEEEEccccCCCCCCccEEEEeCccccC--CCCCEEEEEeCCCCCCCCCCc
Confidence 11 0 122 467888889998763 223567788865544 267899999988778999999
Q ss_pred EEEEEEEeeccCcchHHHHHHHHHHHH
Q 011414 417 FVLYFSALCDEVNQGKKLLHAALSALQ 443 (486)
Q Consensus 417 ~vi~~~t~~~~~~~~~~~l~~~~~~l~ 443 (486)
++++++++++. .+++++|++++++|.
T Consensus 362 ~~~~v~~~~~~-~~~~~~l~~~~~~l~ 387 (453)
T 2bcg_G 362 YLAIISTIIET-DKPHIELEPAFKLLG 387 (453)
T ss_dssp EEEEEEEECCS-SCHHHHTHHHHGGGC
T ss_pred EEEEEEEecCC-CCHHHHHHHHHHHhh
Confidence 99999998875 477888999988866
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=4.3e-39 Score=332.49 Aligned_cols=370 Identities=27% Similarity=0.510 Sum_probs=279.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccc-hhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (486)
+.++||||||+|++||++|++|+++|++|+|+|+++++||+++|++ +....++. +.+.. .+.
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~-~~~~~-------~~~--------- 66 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF-QLLEG-------PPE--------- 66 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHT-TCTTC-------CCG---------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhc-cCCCC-------Chh---------
Confidence 4579999999999999999999999999999999999999999998 43211111 11000 000
Q ss_pred ccccCCCCceEeecCCCEEEecChHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCChHhHHHH
Q 011414 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (486)
Q Consensus 99 ~~~~~~~~~~~idl~Gp~ll~~~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l 178 (486)
.+ ...+.|.+|+ ||++++..+.+.++|.++|+.+|++|...+..|++. +|+.+.+|.+..+.+....++..+|+.+
T Consensus 67 -~~-~~g~~~~~d~-gP~~l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~ 142 (433)
T 1d5t_A 67 -TM-GRGRDWNVDL-IPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYK-GGKIYKVPSTETEALASNLMGMFEKRRF 142 (433)
T ss_dssp -GG-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGGCCEEECCEEEEEE-TTEEEECCCSHHHHHHCSSSCHHHHHHH
T ss_pred -Hh-cccCceEEcc-CcceeeccchHHHHHHHcCCccceEEEEeCceEEee-CCEEEECCCCHHHHhhCcccChhhHHHH
Confidence 01 1235788999 599999999999999999999999999988877764 8899999998767888788888899999
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHHhhccCCchhhhhhhchhhHHHHHHHHH
Q 011414 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (486)
Q Consensus 179 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i~~~~~~~~~~~~~~s~~~~l~~~~~~~ 258 (486)
++|+..+..+....+.. .+ ..++.+.|+.+|+++++.++.+++++.+.+++... .++ ...++..++.++..|.
T Consensus 143 ~~~~~~~~~~~~~~p~~---~~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~-~~~--~~~p~~~~~~~~~~~~ 215 (433)
T 1d5t_A 143 RKFLVFVANFDENDPKT---FE-GVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRT-DDY--LDQPCLETINRIKLYS 215 (433)
T ss_dssp HHHHHHHHHCCTTCGGG---GT-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSS-SGG--GGSBSHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCchh---cc-ccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccC-CCc--cCCCHHHHHHHHHHHH
Confidence 99998887653221110 01 11345789999999999999999987765444211 111 1235666667777888
Q ss_pred HhhhcccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECCCCCC
Q 011414 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTV 338 (486)
Q Consensus 259 ~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p~~~~ 338 (486)
.+++++|. ++++||+||+++|+++|++.++++|++|+++++|++|..+ ++++++|+ .+|++++||+||++....
T Consensus 216 ~s~~~~g~--~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~--~~~v~~v~-~~g~~~~ad~VV~a~~~~- 289 (433)
T 1d5t_A 216 ESLARYGK--SPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK-SEGEVARCKQLICDPSYV- 289 (433)
T ss_dssp HSCCSSSC--CSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE--TTEEEEEE-ETTEEEECSEEEECGGGC-
T ss_pred HHHHhcCC--CcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEe--CCEEEEEE-ECCeEEECCEEEECCCCC-
Confidence 77776764 3478999999999999999999999999999999999987 67887787 588899999999864432
Q ss_pred CCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCCC--CCceEEEeCCCCCCCCCCceEEEEEeCCCCccCCCCe
Q 011414 339 PGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD--LSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (486)
Q Consensus 339 ~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~~--~~~~~~~~p~~~~~~~~~~~v~v~~~~~~~~~~P~G~ 416 (486)
+..+ + ......++++++++++... +.+..+.+|....+ .++.+|+.+.+.+++.||+|+
T Consensus 290 ~~~~-------~----------~~~~~~~~~~il~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~v~~~s~d~~~aP~G~ 350 (433)
T 1d5t_A 290 PDRV-------R----------KAGQVIRIICILSHPIKNTNDANSCQIIIPQNQVN--RKSDIYVCMISYAHNVAAQGK 350 (433)
T ss_dssp GGGE-------E----------EEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTT--CSSCEEEEEEEGGGTSSCTTC
T ss_pred cccc-------c----------ccCcceeEEEEEcCcccccCCCceEEEEeCccccC--CCCCEEEEEECCCCcccCCCC
Confidence 1110 0 0123566788888887532 24567788865544 367899999997778999999
Q ss_pred EEEEEEEeeccCcchHHHHHHHHHHHH
Q 011414 417 FVLYFSALCDEVNQGKKLLHAALSALQ 443 (486)
Q Consensus 417 ~vi~~~t~~~~~~~~~~~l~~~~~~l~ 443 (486)
++++++++++. .+++++|++++++|.
T Consensus 351 ~~~~~~~~~p~-~~~~~~l~~~~~~l~ 376 (433)
T 1d5t_A 351 YIAIASTTVET-TDPEKEVEPALGLLE 376 (433)
T ss_dssp EEEEEEEECCS-SCHHHHTHHHHTTTC
T ss_pred EEEEEEEecCC-CCHHHHHHHHHHHhh
Confidence 99999998875 477888999998876
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=3.4e-31 Score=278.46 Aligned_cols=345 Identities=14% Similarity=0.102 Sum_probs=203.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (486)
.+|||||||++||+||++|+++|++|+|||+++++||+++|++.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~----------------------------------- 46 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQ----------------------------------- 46 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEET-----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeC-----------------------------------
Confidence 579999999999999999999999999999999999999998654
Q ss_pred CCCCceEeecCCCEEEecChHHHHHHHhcC--cccccchhcccceee-eccCCceeecCCCHHHHhhc-ccCChHhHHHH
Q 011414 103 QHPRNFNLDVSGPRVLFCADHAVDLMLKSG--ASHYLEFKSIDATFM-LDADAKLCSVPDSRAAIFKD-KSLGLMEKNQL 178 (486)
Q Consensus 103 ~~~~~~~idl~Gp~ll~~~~~l~~~l~~~~--~~~y~ef~~~~~~~~-~~~~g~~~~vp~s~~~~f~~-~~l~~~~k~~l 178 (486)
+|.+|. ||+++...+.+.+++...+ +.+++++...++.|. ...+|+.+.++.+...+... ..+++.+...+
T Consensus 47 ----G~~~D~-G~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~ 121 (501)
T 4dgk_A 47 ----GFTFDA-GPTVITDPSAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGY 121 (501)
T ss_dssp ----TEEEEC-SCCCBSCTHHHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHH
T ss_pred ----CEEEec-CceeecCchhHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchh
Confidence 356677 5887766665666666654 567788888777663 33478888888776543321 23456777778
Q ss_pred HHHHHHHHhhcccCcc---cc---cccc---ccccc----cCCcHHHHHHhcCCChHHHHHHHH-HHhhccCCchhhhhh
Q 011414 179 MRFFKLVQGHLSLDES---EE---NNVR---ISEED----LDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYV 244 (486)
Q Consensus 179 ~~fl~~~~~~~~~~~~---~~---~~~~---~~~~~----~~~s~~~~l~~~~l~~~l~~~l~~-~i~~~~~~~~~~~~~ 244 (486)
.+|+..++........ .. ...+ ..... ...++.++++++..++.++.++.+ ++........
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~----- 196 (501)
T 4dgk_A 122 RQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFA----- 196 (501)
T ss_dssp HHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC-------
T ss_pred hhHHHHHHHhhhhhhhhccccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcch-----
Confidence 8888776543221100 00 0000 00011 113677888888888888887653 2222111111
Q ss_pred hchhhHHHHHHHHHHhhhcccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcE
Q 011414 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (486)
Q Consensus 245 ~s~~~~l~~~~~~~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~ 324 (486)
.++.. .+..++ ....| .+||+||+++|+++|++.++++||+|++|++|++|.++ ++++++|++++|++
T Consensus 197 ~~~~~---~~~~~~--~~~~G-----~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~~g~~ 264 (501)
T 4dgk_A 197 TSSIY---TLIHAL--EREWG-----VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETT--GNKIEAVHLEDGRR 264 (501)
T ss_dssp CCCTH---HHHHHH--HSCCC-----EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCE
T ss_pred hhhhh---hhhhhh--hccCC-----eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEee--CCeEEEEEecCCcE
Confidence 12221 111111 11222 57999999999999999999999999999999999998 88999999999999
Q ss_pred EEcCEEEEC--CCCCCCCCCcccchhhhhhh-hhhccCCCcceEEEEEEEecCCCCCCCCceEEEeCCC-CC-------C
Q 011414 325 ILSHKLVLD--PSFTVPGSLASSHQQLQESF-QAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPR-SL-------F 393 (486)
Q Consensus 325 i~A~~VI~~--p~~~~~~l~~~~~~~l~~~~-~~l~~~~~~~~v~r~i~i~~~~~~~~~~~~~~~~p~~-~~-------~ 393 (486)
+.||.||++ |..++..|+ +.. +.+..+ +.+.+...........+.++.+......+.++.-+.. .. +
T Consensus 265 ~~ad~VV~~a~~~~~~~~Ll-~~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~ 342 (501)
T 4dgk_A 265 FLTQAVASNADVVHTYRDLL-SQH-PAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHD 342 (501)
T ss_dssp EECSCEEECCC-----------------------------CCEEEEEEEEESSCCTTSCSEEEEEECC------------
T ss_pred EEcCEEEECCCHHHHHHHhc-ccc-ccchhhhhhhhccccCCceeEEEecccCCccccccceeccccchhhhcccccccc
Confidence 999999964 455544553 211 122111 1121111112233333345666544433333222211 00 0
Q ss_pred -CCCCceEEEEEeCCC-CccCCCCeEEEEEEEeec
Q 011414 394 -PEQVTSIRVLQLGGN-LAVCPLGMFVLYFSALCD 426 (486)
Q Consensus 394 -~~~~~~v~v~~~~~~-~~~~P~G~~vi~~~t~~~ 426 (486)
...++.+|+...+.. +..+|+|+.++++.+..+
T Consensus 343 ~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p 377 (501)
T 4dgk_A 343 GLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVP 377 (501)
T ss_dssp -CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEEC
T ss_pred ccccCCceecccCCCCCCCcCCCCCceEEEEEecC
Confidence 012456777777655 588999999988887764
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.93 E-value=2.5e-24 Score=221.16 Aligned_cols=332 Identities=13% Similarity=0.116 Sum_probs=196.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (486)
+||||||||++||+||+.|+++|++|+||||++++||+++++..++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g---------------------------------- 46 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKG---------------------------------- 46 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCC----------------------------------
Confidence 4899999999999999999999999999999999999999976543
Q ss_pred CCCCceEeecCCCEEEec---ChHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCChHhHHHHH
Q 011414 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (486)
Q Consensus 103 ~~~~~~~idl~Gp~ll~~---~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l~ 179 (486)
|.+|. ||+.+.. ...+.+++.+.+.. .++...++...+..+|+.+.+|... ..+++.++..+.
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~ 112 (421)
T 3nrn_A 47 -----FQLST-GALHMIPHGEDGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRESW------KFLSVKEKAKAL 112 (421)
T ss_dssp -----EEEES-SSCSEETTTTSSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGGG------GGCC--------
T ss_pred -----EEEec-CCeEEEccCCChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCch------hhCCHhHHHHHH
Confidence 44555 4654432 23566777777763 3333333322222367777776431 235566666665
Q ss_pred HHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCC-ChHHHHHHHH-HHhhccCCchhhhhhhchhhHHHHHHHH
Q 011414 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKL-PHKIKSIVLY-AIAMADYDQEVSEYVLKTRDGINRLALY 257 (486)
Q Consensus 180 ~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l-~~~l~~~l~~-~i~~~~~~~~~~~~~~s~~~~l~~~~~~ 257 (486)
+++....... ....+.++.+|++++++ .+.++.++.. ......... ..+++...+..+..+
T Consensus 113 ~~~~~~~~~~-------------~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 175 (421)
T 3nrn_A 113 KLLAEIRMNK-------------LPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSL----SDLTALELAKEIRAA 175 (421)
T ss_dssp CCHHHHHTTC-------------CCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCG----GGSBHHHHHHHHHHH
T ss_pred HHHHHHHhcc-------------CCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCc----ccCCHHHHHHHHHHH
Confidence 5554333210 01234789999998744 4445554432 111111111 224555554444433
Q ss_pred HHhhhcccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC-CCC
Q 011414 258 NSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSF 336 (486)
Q Consensus 258 ~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~-p~~ 336 (486)
. .++ + +.+|+||+++|+++|++.++..|++|+++++|++|..+ ++++ | +++|++++||+||++ +..
T Consensus 176 ~----~~~---g-~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~v--V-~~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 176 L----RWG---G-PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIE--EKKV--Y-TRDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp H----HHC---S-CEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETT--TTEE--E-ETTCCEEECSEEEECSCHH
T ss_pred h----hcC---C-cceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE--CCEE--E-EeCCcEEEeCEEEECCCHH
Confidence 2 222 1 57999999999999999999999999999999999875 5654 6 478899999999964 333
Q ss_pred CCCCCCcccchhhhhhh-hhhccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCceEEEEEeCC-CCccCCC
Q 011414 337 TVPGSLASSHQQLQESF-QAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGG-NLAVCPL 414 (486)
Q Consensus 337 ~~~~l~~~~~~~l~~~~-~~l~~~~~~~~v~r~i~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~v~~~~~-~~~~~P~ 414 (486)
...+|+ + .+.++..+ +.+. ...........+.++++..+ ...+ .+++.. . .-.+...+. ++..+|+
T Consensus 243 ~~~~ll-~-~~~~~~~~~~~~~-~~~~~~~~~v~l~~~~~~~~--~~~~-~~~~~~-----~-~~~i~~~s~~~p~~ap~ 310 (421)
T 3nrn_A 243 ETVKLI-G-RDYFDRDYLKQVD-SIEPSEGIKFNLAVPGEPRI--GNTI-VFTPGL-----M-INGFNEPSALDKSLARE 310 (421)
T ss_dssp HHHHHH-C-GGGSCHHHHHHHH-TCCCCCEEEEEEEEESSCSS--CSSE-EECTTS-----S-SCEEECGGGTCGGGSCT
T ss_pred HHHHhc-C-cccCCHHHHHHHh-CCCCCceEEEEEEEcCCccc--CCeE-EEcCCc-----c-eeeEeccCCCCCCcCCC
Confidence 223332 1 11222221 1121 11222344555556766322 2233 344321 1 112233333 3478999
Q ss_pred CeEEEEEEEeeccCcchHHHHHHHHHHHHhh
Q 011414 415 GMFVLYFSALCDEVNQGKKLLHAALSALQKL 445 (486)
Q Consensus 415 G~~vi~~~t~~~~~~~~~~~l~~~~~~l~~~ 445 (486)
|+.+++++.+.... +.++.++.+++.|...
T Consensus 311 G~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~ 340 (421)
T 3nrn_A 311 GYTLIMAHMALKNG-NVKKAIEKGWEELLEI 340 (421)
T ss_dssp TEEEEEEEEECTTC-CHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeeccc-cHHHHHHHHHHHHHHH
Confidence 99999998877543 3345577777777664
No 7
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.93 E-value=8.9e-24 Score=217.05 Aligned_cols=336 Identities=14% Similarity=0.110 Sum_probs=196.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (486)
+||||||||++||+||++|+++|++|+|||+++++||+++++..++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G---------------------------------- 46 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKG---------------------------------- 46 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCC----------------------------------
Confidence 5999999999999999999999999999999999999999976543
Q ss_pred CCCCceEeecCCCEEEec---ChHHHHHHHhcCcccccchhcccceeeec-c--------CCceeecCCCHHHHhhcccC
Q 011414 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLD-A--------DAKLCSVPDSRAAIFKDKSL 170 (486)
Q Consensus 103 ~~~~~~~idl~Gp~ll~~---~~~l~~~l~~~~~~~y~ef~~~~~~~~~~-~--------~g~~~~vp~s~~~~f~~~~l 170 (486)
|.+|. ||..+.. ...+.+++.+.|....+.... .....+. . .++.+.++. . ...+
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~ 113 (425)
T 3ka7_A 47 -----FQLSS-GAFHMLPNGPGGPLACFLKEVEASVNIVRSE-MTTVRVPLKKGNPDYVKGFKDISFND----F--PSLL 113 (425)
T ss_dssp -----EEEES-SSCSCBTTGGGSHHHHHHHHTTCCCCEEECC-CCEEEEESSTTCCSSTTCEEEEEGGG----G--GGGS
T ss_pred -----cEEcC-CCceEecCCCccHHHHHHHHhCCCceEEecC-CceEEeecCCCcccccccccceehhh----h--hhhC
Confidence 33344 3433221 124566677777643322111 1111110 0 133333321 1 1345
Q ss_pred ChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHH-hhccCCchhhhhhhchhh
Q 011414 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRD 249 (486)
Q Consensus 171 ~~~~k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i-~~~~~~~~~~~~~~s~~~ 249 (486)
++.++..+.+.+..... ....+.++.+|++++.-++.++.++.... ....... ..+++..
T Consensus 114 ~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~ 174 (425)
T 3ka7_A 114 SYKDRMKIALLIVSTRK---------------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKS----DEVPVEE 174 (425)
T ss_dssp CHHHHHHHHHHHHHTTT---------------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCG----GGSBHHH
T ss_pred CHHHHHHHHHHHHhhhh---------------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCc----ccchHHH
Confidence 56666655543322110 01235789999998766666666543211 1111111 2345554
Q ss_pred HHHHHHHHHHhhhcccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCE
Q 011414 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (486)
Q Consensus 250 ~l~~~~~~~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~ 329 (486)
.+..+..+. .++ + ..+|.||++.|+++|.+.++..|++|+++++|++|..+ ++++++|++ +|++++||+
T Consensus 175 ~~~~~~~~~----~~~---~-~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~gv~~-~g~~~~ad~ 243 (425)
T 3ka7_A 175 VFEIIENMY----RFG---G-TGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIE--NGKAAGIIA-DDRIHDADL 243 (425)
T ss_dssp HHHHHHHHH----HHC---S-CEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEE-TTEEEECSE
T ss_pred HHHHHHHHH----hcC---C-ccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEE--CCEEEEEEE-CCEEEECCE
Confidence 444433321 222 1 56899999999999999999999999999999999987 778878886 588999999
Q ss_pred EEEC-CCCCCCCCCcccchhh--hhh-hhhhccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCceEEEEEe
Q 011414 330 LVLD-PSFTVPGSLASSHQQL--QES-FQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQL 405 (486)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l--~~~-~~~l~~~~~~~~v~r~i~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~v~~~ 405 (486)
||++ |.....+|+.. .+.+ +.. .+.+ +........+..+.+++++.. ...+.+++.. .....+...
T Consensus 244 VV~a~~~~~~~~ll~~-~~~~~~~~~~~~~~-~~~~~~~~~~v~l~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~ 313 (425)
T 3ka7_A 244 VISNLGHAATAVLCSE-ALSKEADAAYFKMV-GTLQPSAGIKICLAADEPLVG---HTGVLLTPYT-----RRINGVNEV 313 (425)
T ss_dssp EEECSCHHHHHHHTTT-TCCTTTTHHHHHHH-HHCCCBEEEEEEEEESSCSSC---SSSEEECCSS-----SSEEEEECG
T ss_pred EEECCCHHHHHHhcCC-cccccCCHHHHHHh-hCcCCCceEEEEeecCCCccC---cCEEEECCCh-----hhcceEEec
Confidence 9964 33322333211 1111 221 1222 112233445555567877532 2333444321 122334444
Q ss_pred CC-CCccCCCCeEEEEEEEeecc--CcchHHHHHHHHHHHHhh
Q 011414 406 GG-NLAVCPLGMFVLYFSALCDE--VNQGKKLLHAALSALQKL 445 (486)
Q Consensus 406 ~~-~~~~~P~G~~vi~~~t~~~~--~~~~~~~l~~~~~~l~~~ 445 (486)
+. ++..+|+|+.++++...... ....++.++.+++.|-..
T Consensus 314 s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 356 (425)
T 3ka7_A 314 TQADPELAPPGKHLTMCHQYVAPENVKNLESEIEMGLEDLKEI 356 (425)
T ss_dssp GGTCGGGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHH
T ss_pred cCCCCCcCCCCCeEEEEEeccccccccchHHHHHHHHHHHHHh
Confidence 43 35789999999988765432 112235566666666553
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.92 E-value=8.5e-24 Score=220.70 Aligned_cols=330 Identities=15% Similarity=0.145 Sum_probs=194.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (486)
..+||||||||++||+||..|+++|++|+|||+++++||+++|++.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~--------------------------------- 61 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALA--------------------------------- 61 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEET---------------------------------
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccC---------------------------------
Confidence 35799999999999999999999999999999999999999998653
Q ss_pred ccCCCCceEeecCCCEEEec-ChHHHHHHHhcCcccccchhcc--cceeeeccCCceeecCCCHHHHhhcccCChHhHHH
Q 011414 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSI--DATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (486)
Q Consensus 101 ~~~~~~~~~idl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~--~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~ 177 (486)
.+.+|. |++++.. ...+.+++.+.|+...+.+... ...+++. +|+.+.+|.+..+++....++..++..
T Consensus 62 ------g~~~~~-g~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~~~~~ 133 (478)
T 2ivd_A 62 ------GYLVEQ-GPNSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYT-RGRLRSVPASPPAFLASDILPLGARLR 133 (478)
T ss_dssp ------TEEEES-SCCCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEE-TTEEEECCCSHHHHHTCSSSCHHHHHH
T ss_pred ------Ceeeec-ChhhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEE-CCEEEECCCCHHHhccCCCCCHHHHHH
Confidence 245566 5777655 3467788889998765543321 1234443 788888888776666655555443322
Q ss_pred HHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHH-hhccCCchhhhhhhchhhHHHHHHH
Q 011414 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRDGINRLAL 256 (486)
Q Consensus 178 l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i-~~~~~~~~~~~~~~s~~~~l~~~~~ 256 (486)
+ +...... . .....+.++.+|+++..-.+.++.++...+ ..... ++ .++++...+..+..
T Consensus 134 ~------~~~~~~~-~--------~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~s~~~~~~~~~~ 194 (478)
T 2ivd_A 134 V------AGELFSR-R--------APEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAG--DV--EQLSVAATFPMLVK 194 (478)
T ss_dssp H------HGGGGCC-C--------CCTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHHHCC--CT--TTBBHHHHCHHHHH
T ss_pred H------hhhhhcC-C--------CCCCCCCCHHHHHHHhhCHHHHHHHHHHHhceeecC--CH--HHhhHHHHhHHHHH
Confidence 1 2221110 0 012456899999997533333333332111 11111 11 22455444444333
Q ss_pred HHHhhhc-------c----------cCCC----cceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEE
Q 011414 257 YNSSIGR-------F----------QNAL----GALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYK 315 (486)
Q Consensus 257 ~~~s~g~-------~----------g~~~----g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~ 315 (486)
+....+. . .... +.+.+|+||++.|+++|++.+ |++|+++++|++|..+ +++ +
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~--~~~-~ 268 (478)
T 2ivd_A 195 MEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE--DGG-W 268 (478)
T ss_dssp HHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC----C-C
T ss_pred HHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec--CCe-E
Confidence 2211110 0 0000 236799999999999987654 7899999999999876 444 5
Q ss_pred EEEe---CCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCC
Q 011414 316 GVRL---ASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRS 391 (486)
Q Consensus 316 gV~~---~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~~~~~~~~~~p~~~ 391 (486)
.|++ .+|++++||+||++ |...+.+++ ++++..+....+......+.+..+.+++++.+.+....+.+|...
T Consensus 269 ~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll----~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~ 344 (478)
T 2ivd_A 269 RLIIEEHGRRAELSVAQVVLAAPAHATAKLL----RPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEE 344 (478)
T ss_dssp EEEEEETTEEEEEECSEEEECSCHHHHHHHH----TTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGG
T ss_pred EEEEeecCCCceEEcCEEEECCCHHHHHHHh----hccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCC
Confidence 7877 68888999999965 433222332 223333222223334556777788888875333222334445321
Q ss_pred CCCCCCceEEEEEeCC-CCccCCCCeEEEEEEEe
Q 011414 392 LFPEQVTSIRVLQLGG-NLAVCPLGMFVLYFSAL 424 (486)
Q Consensus 392 ~~~~~~~~v~v~~~~~-~~~~~P~G~~vi~~~t~ 424 (486)
......+...+. ....+|+|..++.+...
T Consensus 345 ----~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~ 374 (478)
T 2ivd_A 345 ----QRRMLGAIHASTTFPFRAEGGRVLYSCMVG 374 (478)
T ss_dssp ----CCSCCEEEEHHHHCGGGBSTTCEEEEEEEE
T ss_pred ----CCceEEEEEEcccCCCcCCCCCEEEEEEeC
Confidence 011222333222 24567888776655443
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.91 E-value=6.5e-23 Score=216.46 Aligned_cols=295 Identities=14% Similarity=0.079 Sum_probs=184.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (486)
.++||||||||++||+||..|+++|++|+|||+++++||++.|+..+.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~-------------------------------- 50 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK-------------------------------- 50 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTT--------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCC--------------------------------
Confidence 468999999999999999999999999999999999999999976420
Q ss_pred ccCCCCceEeecCCCEEEec-ChHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCChHhHHHHH
Q 011414 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (486)
Q Consensus 101 ~~~~~~~~~idl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l~ 179 (486)
.+.+|+ |++++.. ...+.+++.+.|+..+..+... ..++..+|+.+.++... . ..+++.+...+.
T Consensus 51 ------g~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~--~~~~~~~g~~~~~~~~~----p-~~~~~~~~~~~~ 116 (520)
T 1s3e_A 51 ------VKYVDL-GGSYVGPTQNRILRLAKELGLETYKVNEVE--RLIHHVKGKSYPFRGPF----P-PVWNPITYLDHN 116 (520)
T ss_dssp ------TSCEES-SCCEECTTCHHHHHHHHHTTCCEEECCCSS--EEEEEETTEEEEECSSS----C-CCCSHHHHHHHH
T ss_pred ------Cccccc-CceEecCCcHHHHHHHHHcCCcceecccCC--ceEEEECCEEEEecCCC----C-CCCCHHHHHHHH
Confidence 234566 5776644 3467788888888765543322 12222356665554320 0 012333343444
Q ss_pred HHHHHHHhhcccCcccccc-ccccccccCCcHHHHHHhcCCChHHHHHHHHHH-hhccCCchhhhhhhchhhHHHHHHHH
Q 011414 180 RFFKLVQGHLSLDESEENN-VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRDGINRLALY 257 (486)
Q Consensus 180 ~fl~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i-~~~~~~~~~~~~~~s~~~~l~~~~~~ 257 (486)
+++..+............. .....++.+.++.+|+++...++.++.++.... .... .++ .++++...+. +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g--~~~--~~~s~~~~~~----~ 188 (520)
T 1s3e_A 117 NFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVT--AET--HEVSALWFLW----Y 188 (520)
T ss_dssp HHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHS--SCT--TTSBHHHHHH----H
T ss_pred HHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcC--CCh--HHhHHHHHHH----H
Confidence 4444333221110000000 000123567899999999888888877654321 1111 121 2245544332 2
Q ss_pred HHhhhc----ccC-CCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 258 NSSIGR----FQN-ALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 258 ~~s~g~----~g~-~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
+...+. +.. ..+.+.++.||+++|+++|++. +|++|++|++|++|..+ ++++ .|++.+|+++.||+||+
T Consensus 189 ~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~v-~v~~~~g~~~~ad~VI~ 262 (520)
T 1s3e_A 189 VKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDL---LGDRVKLERPVIYIDQT--RENV-LVETLNHEMYEAKYVIS 262 (520)
T ss_dssp HHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHH---HGGGEESSCCEEEEECS--SSSE-EEEETTSCEEEESEEEE
T ss_pred HhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHH---cCCcEEcCCeeEEEEEC--CCeE-EEEECCCeEEEeCEEEE
Confidence 222211 000 1122568999999999988764 48899999999999876 4554 48888999999999996
Q ss_pred C-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCC
Q 011414 333 D-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (486)
Q Consensus 333 ~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~ 377 (486)
+ |...+.++. ++|++|..+....++..++.+.+..+.+++++-
T Consensus 263 a~p~~~l~~l~--~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (520)
T 1s3e_A 263 AIPPTLGMKIH--FNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFW 306 (520)
T ss_dssp CSCGGGGGGSE--EESCCCHHHHHHTTSCCBCCEEEEEEECSSCGG
T ss_pred CCCHHHHccee--eCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcc
Confidence 5 444434442 566777766555455667778888888998863
No 10
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.90 E-value=2.7e-22 Score=207.85 Aligned_cols=292 Identities=11% Similarity=0.104 Sum_probs=175.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (486)
+.++||||||||++||+||..|+++|++|+|||+++++||++.++..++
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g------------------------------- 51 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDG------------------------------- 51 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETT-------------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCC-------------------------------
Confidence 4578999999999999999999999999999999999999999876432
Q ss_pred cccCCCCceEeecCCCEEEec-ChHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCChHhHHHH
Q 011414 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (486)
Q Consensus 100 ~~~~~~~~~~idl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l 178 (486)
+.+|+ |++++.. ...+.+++.+.|+..+..+......+. ..+|+.+.+.... ..+++.....+
T Consensus 52 --------~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~~~~~~~------~~~~~~~~~~~ 115 (453)
T 2yg5_A 52 --------AVLEI-GGQWVSPDQTALISLLDELGLKTFERYREGESVYI-SSAGERTRYTGDS------FPTNETTKKEM 115 (453)
T ss_dssp --------EEEEC-SCCCBCTTCHHHHHHHHHTTCCEEECCCCSEEEEE-CTTSCEEEECSSS------CSCCHHHHHHH
T ss_pred --------ceecc-CCeEecCccHHHHHHHHHcCCcccccccCCCEEEE-eCCCceeeccCCC------CCCChhhHHHH
Confidence 23344 3454432 346778888888876655443222222 2125544442210 01222222222
Q ss_pred HHHHHHHHh----hcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHHhhccCCchhhhh-hhchhhHHHH
Q 011414 179 MRFFKLVQG----HLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEY-VLKTRDGINR 253 (486)
Q Consensus 179 ~~fl~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i~~~~~~~~~~~~-~~s~~~~l~~ 253 (486)
.+++..+.. .....+.. ......+.+.++.+|++++..++.++.++...+ ...+..++ . ++++...+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~s~~~~~~~ 189 (453)
T 2yg5_A 116 DRLIDEMDDLAAQIGAEEPWA---HPLARDLDTVSFKQWLINQSDDAEARDNIGLFI-AGGMLTKP--AHSFSALQAVLM 189 (453)
T ss_dssp HHHHHHHHHHHHHHCSSCGGG---STTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHH-CCCCCCSC--TTSSBHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCC---CcchhhhhhccHHHHHHhhcCCHHHHHHHHHHH-HhhcccCC--cccccHHHHHHH
Confidence 222222111 11100000 000123457899999999888888887654322 12222222 2 3455544332
Q ss_pred HHHHHHhhhcc----cCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCE
Q 011414 254 LALYNSSIGRF----QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (486)
Q Consensus 254 ~~~~~~s~g~~----g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~ 329 (486)
+ ...+.+ ....+.+.+++||+++|+++|++ .+|++|++|++|++|..+ +++.+.|++ +|++++||+
T Consensus 190 ~----~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~---~lg~~i~~~~~V~~i~~~--~~~~v~v~~-~~~~~~ad~ 259 (453)
T 2yg5_A 190 A----ASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAE---ALGDDVFLNAPVRTVKWN--ESGATVLAD-GDIRVEASR 259 (453)
T ss_dssp H----HHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHH---HHGGGEECSCCEEEEEEE--TTEEEEEET-TTEEEEEEE
T ss_pred h----ccCCcHhhhccCCCcceEEEcCChHHHHHHHHH---hcCCcEEcCCceEEEEEe--CCceEEEEE-CCeEEEcCE
Confidence 2 221111 00001256899999999998876 458999999999999887 554245764 788999999
Q ss_pred EEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCC
Q 011414 330 LVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (486)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~ 376 (486)
||++ |...+.++. +++++|..+....+...++.+.+..+.+++++
T Consensus 260 VI~a~p~~~~~~l~--~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (453)
T 2yg5_A 260 VILAVPPNLYSRIS--YDPPLPRRQHQMHQHQSLGLVIKVHAVYETPF 305 (453)
T ss_dssp EEECSCGGGGGGSE--EESCCCHHHHHHGGGEEECCEEEEEEEESSCG
T ss_pred EEEcCCHHHHhcCE--eCCCCCHHHHHHHhcCCCcceEEEEEEECCCC
Confidence 9964 444444442 45666665444334444566778777788875
No 11
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.90 E-value=1.2e-22 Score=211.09 Aligned_cols=349 Identities=13% Similarity=0.128 Sum_probs=191.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCC------CcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccc
Q 011414 22 AFDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISN 95 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G------~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (486)
++||||||||++||+||++|+++| ++|+|||+++++||++.|...++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g--------------------------- 57 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDG--------------------------- 57 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTT---------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCC---------------------------
Confidence 489999999999999999999999 99999999999999999975432
Q ss_pred cccccccCCCCceEeecCCCEEEec-ChHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCH--------HHHhh
Q 011414 96 YASRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSR--------AAIFK 166 (486)
Q Consensus 96 ~~~~~~~~~~~~~~idl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~--------~~~f~ 166 (486)
+.+|. |++.+.. ...+.+++.+.|+...+........+++. +|++..+|... ..++.
T Consensus 58 ------------~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~p~~~~~~~~ 123 (470)
T 3i6d_A 58 ------------YIIER-GPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLV-NRTLHPMPKGAVMGIPTKIAPFVS 123 (470)
T ss_dssp ------------CCEES-SCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEEC-SSCEEECCC---------------
T ss_pred ------------EEecc-ChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEE-CCEEEECCCCcccCCcCchHHhhc
Confidence 33455 4654433 34677888888887655432233344443 67777776532 11111
Q ss_pred cccCChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHHhhccCCchhhhhhhc
Q 011414 167 DKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLK 246 (486)
Q Consensus 167 ~~~l~~~~k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i~~~~~~~~~~~~~~s 246 (486)
...++..++... ........ .....+.++.+|+++..-.+....++... ....+..+. .+++
T Consensus 124 ~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~s 185 (470)
T 3i6d_A 124 TGLFSLSGKARA--AMDFILPA-------------SKTKDDQSLGEFFRRRVGDEVVENLIEPL-LSGIYAGDI--DKLS 185 (470)
T ss_dssp ------CCSHHH--HHHHHSCC-------------CSSSSCCBHHHHHHHHSCHHHHHHTHHHH-HHHTTCSCT--TTBB
T ss_pred cCcCCHHHHHHH--hcCcccCC-------------CCCCCCcCHHHHHHHhcCHHHHHHhccch-hcEEecCCH--HHhh
Confidence 222222121110 01111000 12345689999998743333333332211 111122222 2234
Q ss_pred hhhHHHHHHHHHHhhhccc-----------------CCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEec
Q 011414 247 TRDGINRLALYNSSIGRFQ-----------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQ 309 (486)
Q Consensus 247 ~~~~l~~~~~~~~s~g~~g-----------------~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~ 309 (486)
+...+..+..+....+... ...+.+.++.+|++.|+++|++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~- 262 (470)
T 3i6d_A 186 LMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHS- 262 (470)
T ss_dssp HHHHCGGGCC-------------------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEEC-
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEc-
Confidence 4333222211111110000 00123778999999999988764433 799999999999876
Q ss_pred CCCeEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCCCC-CceEEEe
Q 011414 310 NSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDL-SNFLVIF 387 (486)
Q Consensus 310 ~~g~~~gV~~~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~~~-~~~~~~~ 387 (486)
+++ +.|++.+|++++||+||+. |...+.+++ .++++.... +......+.+..+.+++++-+.+ ....+.+
T Consensus 263 -~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l~--~~~~~~~~~----~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~ 334 (470)
T 3i6d_A 263 -GSC-YSLELDNGVTLDADSVIVTAPHKAAAGML--SELPAISHL----KNMHSTSVANVALGFPEGSVQMEHEGTGFVI 334 (470)
T ss_dssp -SSS-EEEEESSSCEEEESEEEECSCHHHHHHHT--TTSTTHHHH----HTCEEEEEEEEEEEESSTTCCCSSCSSEEEE
T ss_pred -CCe-EEEEECCCCEEECCEEEECCCHHHHHHHc--CCchhhHHH----hcCCCCceEEEEEEECchhcCCCCCCeEEEc
Confidence 444 5788889989999999964 443323332 122222222 22345667777778898864332 2334455
Q ss_pred CCCCCCCCCCceEEEEEeCC--CCccCCCCeEEEEEEEeecc-----CcchHHHHHHHHHHHHhh
Q 011414 388 PPRSLFPEQVTSIRVLQLGG--NLAVCPLGMFVLYFSALCDE-----VNQGKKLLHAALSALQKL 445 (486)
Q Consensus 388 p~~~~~~~~~~~v~v~~~~~--~~~~~P~G~~vi~~~t~~~~-----~~~~~~~l~~~~~~l~~~ 445 (486)
|... ...+....+.+ ....+|.|..++.+...... ....++.++.+++.|...
T Consensus 335 ~~~~-----~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (470)
T 3i6d_A 335 SRNS-----DFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKV 394 (470)
T ss_dssp CSTT-----CCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGG
T ss_pred cCCC-----CCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHH
Confidence 5432 12233333322 23567888877766542221 123355566666666554
No 12
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.89 E-value=1.1e-21 Score=204.52 Aligned_cols=329 Identities=15% Similarity=0.163 Sum_probs=191.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC--CcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (486)
|.++||||||||++||+||++|+++| ++|+|||+++++||+++|....+
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g----------------------------- 52 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDG----------------------------- 52 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTT-----------------------------
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCC-----------------------------
Confidence 44689999999999999999999999 99999999999999999975432
Q ss_pred cccccCCCCceEeecCCCEEEec-ChHHHHHHHhcCcccccchhcccceeeeccCCceeecCCC--------HHHHhhcc
Q 011414 98 SRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDS--------RAAIFKDK 168 (486)
Q Consensus 98 ~~~~~~~~~~~~idl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s--------~~~~f~~~ 168 (486)
|.+|. |++.+.. ...+.+++.+.|+............+++. +|++..+|.. ...+++..
T Consensus 53 ----------~~~~~-g~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~p~~~~~~~~~~ 120 (475)
T 3lov_A 53 ----------FTIER-GPDSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILD-TGGLHPIPKGAVMGIPTDLDLFRQTT 120 (475)
T ss_dssp ----------CCEES-SCCCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEE-TTEEEECCSSEETTEESCHHHHTTCS
T ss_pred ----------EEEec-CchhhhcccHHHHHHHHHcCCcceEeecCCCceEEEE-CCEEEECCCcccccCcCchHHHhhcc
Confidence 33444 4554433 34677888888887655433223344443 6777776653 34555556
Q ss_pred cCChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHHhhccCCchhhhhhhchh
Q 011414 169 SLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTR 248 (486)
Q Consensus 169 ~l~~~~k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i~~~~~~~~~~~~~~s~~ 248 (486)
.++..++..+. ........ .......+.++.+|+++..-.+....++.. +....+..+. ..+++.
T Consensus 121 ~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~--~~ls~~ 185 (475)
T 3lov_A 121 LLTEEEKQEVA---DLLLHPSD---------SLRIPEQDIPLGEYLRPRLGDALVEKLIEP-LLSGIYAGNI--DQMSTF 185 (475)
T ss_dssp SSCHHHHHHHH---HHHHSCCT---------TCCCCSSCCBHHHHHHHHHCHHHHHHTHHH-HHHGGGCCCT--TTSBST
T ss_pred CCChhHHHHhh---CcccCCcc---------cccCCCCCcCHHHHHHHHhCHHHHHHHHHH-HhceeecCCh--HHcCHH
Confidence 66665554222 21111100 001134568999999874222223333321 1111122222 234555
Q ss_pred hHHHHHHHHHHhhhcc-------c-------------CCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEe
Q 011414 249 DGINRLALYNSSIGRF-------Q-------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (486)
Q Consensus 249 ~~l~~~~~~~~s~g~~-------g-------------~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~ 308 (486)
..+..+..+....+.+ . ...+.+.++.+|++.|+++|++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 263 (475)
T 3lov_A 186 ATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE 263 (475)
T ss_dssp TTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE
T ss_pred HHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe
Confidence 4444443332221110 0 00134788999999999988765433 799999999999887
Q ss_pred cCCCeEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCCCCCceEEEe
Q 011414 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIF 387 (486)
Q Consensus 309 ~~~g~~~gV~~~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~~~~~~~~~~ 387 (486)
++. +.|++.+| +++||+||+. |...+.+++ .++++ .. + +...+..+.+..+.+++++........+.+
T Consensus 264 --~~~-~~v~~~~g-~~~ad~vV~a~p~~~~~~ll--~~~~~-~~---~-~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~ 332 (475)
T 3lov_A 264 --DGR-YRLKTDHG-PEYADYVLLTIPHPQVVQLL--PDAHL-PE---L-EQLTTHSTATVTMIFDQQQSLPIEGTGFVV 332 (475)
T ss_dssp --TTE-EEEECTTC-CEEESEEEECSCHHHHHHHC--TTSCC-HH---H-HTCCEEEEEEEEEEEECCSSCSSSSSEEEE
T ss_pred --CCE-EEEEECCC-eEECCEEEECCCHHHHHHHc--CccCH-HH---H-hcCCCCeEEEEEEEECCcCCCCCCCEEEEe
Confidence 454 56888888 8999999964 443323332 12222 11 1 223456677777788998722222334555
Q ss_pred CCCCCCCCCCceEEEEEeCCC--CccCCCCeEEEEEEE
Q 011414 388 PPRSLFPEQVTSIRVLQLGGN--LAVCPLGMFVLYFSA 423 (486)
Q Consensus 388 p~~~~~~~~~~~v~v~~~~~~--~~~~P~G~~vi~~~t 423 (486)
|+.. ...+....+.+. ....|. ..++.+..
T Consensus 333 ~~~~-----~~~~~~~~~~s~~~~~~~p~-~~~l~~~~ 364 (475)
T 3lov_A 333 NRRA-----PYSITACTAIDQKWNHSAPD-HTVLRAFV 364 (475)
T ss_dssp CTTS-----SCSEEEEEEHHHHCTTTCTT-EEEEEEEE
T ss_pred cCCC-----CCceEEEEEEcccCCCCCCC-cEEEEEEe
Confidence 5432 123443444332 344566 55544433
No 13
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.89 E-value=2.9e-22 Score=209.00 Aligned_cols=329 Identities=13% Similarity=0.075 Sum_probs=184.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--cEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 011414 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (486)
+||||||||++||+||++|+++|+ +|+|||+++++||++.++...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~--------------------------------- 49 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP--------------------------------- 49 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT---------------------------------
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc---------------------------------
Confidence 699999999999999999999999 999999999999999986532
Q ss_pred ccCCCCceEeecCCCEEEecC----hHHHHHHHhcCcccccchhc-----ccceeeeccCCceeecCCCHHHHhhc-ccC
Q 011414 101 LSQHPRNFNLDVSGPRVLFCA----DHAVDLMLKSGASHYLEFKS-----IDATFMLDADAKLCSVPDSRAAIFKD-KSL 170 (486)
Q Consensus 101 ~~~~~~~~~idl~Gp~ll~~~----~~l~~~l~~~~~~~y~ef~~-----~~~~~~~~~~g~~~~vp~s~~~~f~~-~~l 170 (486)
..+.+|. ||+.+... ..+.+++.+.|+...+.... ....+++. +|++.++|.+...++.. ..+
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~ 122 (477)
T 3nks_A 50 -----NGAIFEL-GPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYV-GGALHALPTGLRGLLRPSPPF 122 (477)
T ss_dssp -----TSCEEES-SCCCBCCCHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEE-TTEEEECCCSSCC---CCTTS
T ss_pred -----CCeEEEe-CCCcccCCCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEE-CCEEEECCCChhhcccccchh
Confidence 1244555 46665443 24667788888764332211 11234543 78888888764333321 111
Q ss_pred ChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHHhhccCCchhhhhhhchhhH
Q 011414 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (486)
Q Consensus 171 ~~~~k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i~~~~~~~~~~~~~~s~~~~ 250 (486)
... .+.+. +..... + .....+.++.+|+++..-.+....++...+ ...+..+. .++++...
T Consensus 123 ~~~---~~~~~---~~~~~~--~--------~~~~~~~s~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~--~~ls~~~~ 183 (477)
T 3nks_A 123 SKP---LFWAG---LRELTK--P--------RGKEPDETVHSFAQRRLGPEVASLAMDSLC-RGVFAGNS--RELSIRSC 183 (477)
T ss_dssp CSC---SSHHH---HTTTTS--C--------CCCSSCCBHHHHHHHHHCHHHHHHTHHHHH-HHHHSSCT--TTBBHHHH
T ss_pred hhH---HHHHH---HHhhhc--C--------CCCCCCcCHHHHHHHhhCHHHHHHHHHHHh-cccccCCH--HHhhHHHH
Confidence 111 11111 111110 0 112346799999986322222222221110 00111121 23455554
Q ss_pred HHHHHHHHHhhhcc----------------------cCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEe
Q 011414 251 INRLALYNSSIGRF----------------------QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (486)
Q Consensus 251 l~~~~~~~~s~g~~----------------------g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~ 308 (486)
+..+..+....+.. ......+++++||++.|+++|++.+...|++|+++++|++|..+
T Consensus 184 ~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~ 263 (477)
T 3nks_A 184 FPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ 263 (477)
T ss_dssp CHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC
T ss_pred HHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc
Confidence 44433322111100 00011267899999999999999999999999999999999876
Q ss_pred cCCCeEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCCCCCceEEEe
Q 011414 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIF 387 (486)
Q Consensus 309 ~~~g~~~gV~~~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~~~~~~~~~~ 387 (486)
+++.+.|++ +|+++.||+||++ |.+...+|+.+..+++.. .+ .......+.+..+.+++++.+.. ..-..+
T Consensus 264 --~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~~~~~~~---~l-~~~~~~~~~~v~l~~~~~~~~~~-~~g~l~ 335 (477)
T 3nks_A 264 --AEGRWKVSL-RDSSLEADHVISAIPASVLSELLPAEAAPLAR---AL-SAITAVSVAVVNLQYQGAHLPVQ-GFGHLV 335 (477)
T ss_dssp --GGGCEEEEC-SSCEEEESEEEECSCHHHHHHHSCGGGHHHHH---HH-HTCCEEEEEEEEEEETTCCCSSC-SSEEEC
T ss_pred --CCceEEEEE-CCeEEEcCEEEECCCHHHHHHhccccCHHHHH---HH-hcCCCCcEEEEEEEECCCCCCCC-CceEEc
Confidence 444356764 6678999999964 444333333222222222 22 22345556666667888765433 234445
Q ss_pred CCCCCCCCCCceEEEEEeCCC--CccC-CCCeEEEEEEE
Q 011414 388 PPRSLFPEQVTSIRVLQLGGN--LAVC-PLGMFVLYFSA 423 (486)
Q Consensus 388 p~~~~~~~~~~~v~v~~~~~~--~~~~-P~G~~vi~~~t 423 (486)
|+.. ...+....+++. .... |+|..++.+..
T Consensus 336 ~~~~-----~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~ 369 (477)
T 3nks_A 336 PSSE-----DPGVLGIVYDSVAFPEQDGSPPGLRVTVML 369 (477)
T ss_dssp CTTT-----CSSEEEEECHHHHCGGGSTTTTCEEEEEEE
T ss_pred cCCC-----CCCceEEEEeccccCCCCCCCCceEEEEEE
Confidence 5432 122333344332 2222 33777765544
No 14
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.89 E-value=9.2e-22 Score=206.71 Aligned_cols=360 Identities=13% Similarity=0.078 Sum_probs=197.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (486)
..+||||||||++||+||+.|+++|++|+|||+++++||+++|+..+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------------------- 58 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQD--------------------------------- 58 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEET---------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccC---------------------------------
Confidence 46899999999999999999999999999999999999999997643
Q ss_pred ccCCCCceEeecCCCEEEec-ChHHHHHHHhcCcccccchhcccc-eeeeccCCceeecCCCHHHHhhcccCChHhHHHH
Q 011414 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDA-TFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (486)
Q Consensus 101 ~~~~~~~~~idl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~-~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l 178 (486)
.+.+|. |++++.. ...+.+++.+.|+.....|..... .+++ .+|+.+.+|.+...++....++..++..+
T Consensus 59 ------g~~~~~-g~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~-~~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 130 (504)
T 1sez_A 59 ------GLIWDE-GANTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIA-RNGTPVLLPSNPIDLIKSNFLSTGSKLQM 130 (504)
T ss_dssp ------TEEEES-SCCCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEE-SSSSEEECCSSHHHHHHSSSSCHHHHHHH
T ss_pred ------CeEEec-CCcccccCcHHHHHHHHHcCCcccceeccCCCceEEE-ECCeEEECCCCHHHHhccccCCHHHHHHH
Confidence 244566 4776643 346788899999877666543222 3344 48888889988766666555655444332
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHH-HHhhccCCchhhhhhhchhhHHHHHHHH
Q 011414 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVLKTRDGINRLALY 257 (486)
Q Consensus 179 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~-~i~~~~~~~~~~~~~~s~~~~l~~~~~~ 257 (486)
. .......... .. .....+.++.+|+++..-++.++.++.. ..... ..++ .++++...+..+..+
T Consensus 131 ~--~~~~~~~~~~------~~--~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~s~~~~~~~~~~~ 196 (504)
T 1sez_A 131 L--LEPILWKNKK------LS--QVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTC--GGDP--DSLSMHHSFPELWNL 196 (504)
T ss_dssp H--THHHHC------------------CCCBHHHHHHHHHCHHHHHTTHHHHHHHHH--SCCG--GGSBHHHHCHHHHHH
T ss_pred h--HhhhccCccc------cc--ccCCCCccHHHHHHHHcCHHHHHHHHHHHHcccc--CCCh--HHhhHHHHhHHHHHH
Confidence 1 1111110000 00 0123458999999875333333333321 11111 1122 224544433222221
Q ss_pred HHh------------hhcccC-------------CCcceEeecCCcchHHHHHHHHHHHcC-cEEEeCCceeEEEEecCC
Q 011414 258 NSS------------IGRFQN-------------ALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNS 311 (486)
Q Consensus 258 ~~s------------~g~~g~-------------~~g~~~~p~gG~~~L~qal~r~~~~~G-g~i~l~~~V~~I~~~~~~ 311 (486)
... +...+. ....+++++||+++|+++|++ .+| ++|++|++|++|..+ +
T Consensus 197 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~--~ 271 (504)
T 1sez_A 197 EKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCS--C 271 (504)
T ss_dssp HHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEE--C
T ss_pred HHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEec--C
Confidence 111 000000 001256899999999998875 566 899999999999987 3
Q ss_pred Ce-----EEEEEeC--CC---cEEEcCEEEEC-CCCCCCCCCc-ccchhhhhhhhhhccCCCcceEEEEEEEecCCCCC-
Q 011414 312 GS-----YKGVRLA--SG---QDILSHKLVLD-PSFTVPGSLA-SSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP- 378 (486)
Q Consensus 312 g~-----~~gV~~~--~G---~~i~A~~VI~~-p~~~~~~l~~-~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~- 378 (486)
++ .+.|++. +| ++++||+||++ |...+.+++. +..++++... + +......+.+..+.+++++-+
T Consensus 272 ~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~--l-~~~~~~~~~~v~l~~~~~~~~~ 348 (504)
T 1sez_A 272 TEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNF--I-PEVDYVPLSVVITTFKRENVKY 348 (504)
T ss_dssp SSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTT--S-CCCCEEEEEEEEEEEEGGGBSS
T ss_pred CCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHHH--H-hcCCCCceEEEEEEEchhhcCC
Confidence 33 2456554 46 57899999975 4333334321 0001122111 1 222334566666667776422
Q ss_pred CCCceEEEeCCCCCCCCCCceEEEEEeC--CCCccCCCCeEEEEEEEeecc-----CcchHHHHHHHHHHHHhh
Q 011414 379 DLSNFLVIFPPRSLFPEQVTSIRVLQLG--GNLAVCPLGMFVLYFSALCDE-----VNQGKKLLHAALSALQKL 445 (486)
Q Consensus 379 ~~~~~~~~~p~~~~~~~~~~~v~v~~~~--~~~~~~P~G~~vi~~~t~~~~-----~~~~~~~l~~~~~~l~~~ 445 (486)
......+.+|+..... .-.++...++ ..+..+|+|+.++........ ....++.++.+++.|-..
T Consensus 349 ~~~~~~~l~~~~~~~~--g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~ 420 (504)
T 1sez_A 349 PLEGFGVLVPSKEQQH--GLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQL 420 (504)
T ss_dssp CCCSSEEECCGGGGGG--TCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHH
T ss_pred CCCceEEEcCCCCCCC--CCccceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHH
Confidence 2223455666432100 0011112222 223467989877655443221 112345555555555543
No 15
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.89 E-value=6.8e-23 Score=215.56 Aligned_cols=244 Identities=16% Similarity=0.131 Sum_probs=142.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC-CCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 011414 22 AFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~-G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (486)
.+||||||||++||+||++|+++ |++|+|||+++++||+++|+...
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~--------------------------------- 56 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTP--------------------------------- 56 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECT---------------------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEec---------------------------------
Confidence 58999999999999999999985 99999999999999999985321
Q ss_pred ccCCCCceEeecCCCEEEecCh-HHHHHHHhcCcccccchhcccce-eeeccCCceeecCCCHHHHhhcccCChHhHHHH
Q 011414 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDAT-FMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (486)
Q Consensus 101 ~~~~~~~~~idl~Gp~ll~~~~-~l~~~l~~~~~~~y~ef~~~~~~-~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l 178 (486)
.+|.+|. ||++++... .+.+++.+.+... .+|....+. +++. +|+++++|... .+ ..+........
T Consensus 57 -----~G~~~D~-G~h~~~~~~~~v~~l~~e~~~~~-~~~~~~~~~~~i~~-~g~~~~~p~~~-~~---~~~~~~~~~~~ 124 (513)
T 4gde_A 57 -----EGFLYDV-GGHVIFSHYKYFDDCLDEALPKE-DDWYTHQRISYVRC-QGQWVPYPFQN-NI---SMLPKEEQVKC 124 (513)
T ss_dssp -----TSCEEES-SCCCCCCCBHHHHHHHHHHSCSG-GGEEEEECCEEEEE-TTEEEESSGGG-GG---GGSCHHHHHHH
T ss_pred -----CCEEEEe-CceEecCCCHHHHHHHHHhCCcc-ceeEEecCceEEEE-CCeEeecchhh-hh---hhcchhhHHHH
Confidence 2456777 688876655 4566666655422 233333322 3443 78888887531 11 12222222222
Q ss_pred -HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHH--HHHhhccCCchhhhhhhchhhHH----
Q 011414 179 -MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGI---- 251 (486)
Q Consensus 179 -~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~--~~i~~~~~~~~~~~~~~s~~~~l---- 251 (486)
..++....... .......++.+|+.+.. .+.+.+.+. +.-....... .++++....
T Consensus 125 ~~~~~~~~~~~~------------~~~~~~~s~~~~~~~~~-g~~l~~~~~~~~~~~~~~~~~----~~ls~~~~~~~~~ 187 (513)
T 4gde_A 125 IDGMIDAALEAR------------VANTKPKTFDEWIVRMM-GTGIADLFMRPYNFKVWAVPT----TKMQCAWLGERVA 187 (513)
T ss_dssp HHHHHHHHHHHH------------TCCSCCCSHHHHHHHHH-HHHHHHHTHHHHHHHHHSSCG----GGBCSGGGCSSCC
T ss_pred HHHHHHHHHhhh------------cccccccCHHHHHHHhh-hhhhhhhhcchhhhhhccCCh----HHhhHHHHHHhhc
Confidence 22222211110 11233467888876421 122222211 1111111111 112221111
Q ss_pred -----HHHHHHHHhh--hcccCCCcceEe-ecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCc
Q 011414 252 -----NRLALYNSSI--GRFQNALGALIY-PIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ 323 (486)
Q Consensus 252 -----~~~~~~~~s~--g~~g~~~g~~~~-p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~ 323 (486)
..+...+... ..++.. ..+.+ ++||++.|+++|++.+...|++++++++|++|..+ ++ .|++.+|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--~~---~v~~~~G~ 261 (513)
T 4gde_A 188 APNLKAVTTNVILGKTAGNWGPN-ATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN--NK---TVTLQDGT 261 (513)
T ss_dssp CCCHHHHHHHHHHTCCCCSCBTT-BEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT--TT---EEEETTSC
T ss_pred ccchhhhhhhhhhcccccccccc-cceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc--CC---EEEEcCCC
Confidence 1111111110 111111 12444 58999999999999999999999999999999875 44 35578999
Q ss_pred EEEcCEEEEC
Q 011414 324 DILSHKLVLD 333 (486)
Q Consensus 324 ~i~A~~VI~~ 333 (486)
++.||+||++
T Consensus 262 ~~~ad~vI~t 271 (513)
T 4gde_A 262 TIGYKKLVST 271 (513)
T ss_dssp EEEEEEEEEC
T ss_pred EEECCEEEEC
Confidence 9999999975
No 16
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.88 E-value=5.2e-22 Score=208.17 Aligned_cols=295 Identities=15% Similarity=0.117 Sum_probs=177.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (486)
+||||||||++||+||..|+++|++|+|||+++++||++.|++.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~----------------------------------- 84 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNID----------------------------------- 84 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEET-----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccC-----------------------------------
Confidence 899999999999999999999999999999999999999997643
Q ss_pred CCCCceEeecCCCEEEec-ChHHHHHHHhcCcccccchhc----ccceeeeccC--CceeecCCCHHHHhhcccCChHhH
Q 011414 103 QHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS----IDATFMLDAD--AKLCSVPDSRAAIFKDKSLGLMEK 175 (486)
Q Consensus 103 ~~~~~~~idl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~----~~~~~~~~~~--g~~~~vp~s~~~~f~~~~l~~~~k 175 (486)
.+.+|+ |++++.. ...+.+++.+.|+.+.+.... ....+.+. + |+...+|.. +... .-.
T Consensus 85 ----g~~~d~-G~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~--~~~~------~~~ 150 (495)
T 2vvm_A 85 ----GYPYEM-GGTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNHFQLR-TNPTTSTYMTHE--AEDE------LLR 150 (495)
T ss_dssp ----TEEEEC-SCCCBCTTSHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEE-SSTTCCEEECHH--HHHH------HHH
T ss_pred ----CeeecC-CCeEecCccHHHHHHHHHcCCcceeecccccCCCceEEEec-CCCCceeecCHH--HHHH------HHH
Confidence 244666 5776643 346778888888754433321 12233332 3 455555431 1110 001
Q ss_pred HHHHHHHH----HHHhhcccCccccccccccccccCCcHHHHHHhcC--CChHHHHHHHHHHhhccCCchhhhhhhchhh
Q 011414 176 NQLMRFFK----LVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK--LPHKIKSIVLYAIAMADYDQEVSEYVLKTRD 249 (486)
Q Consensus 176 ~~l~~fl~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~--l~~~l~~~l~~~i~~~~~~~~~~~~~~s~~~ 249 (486)
..+.+|++ ..+..... +...........+.+.++.+||++++ +++.++.++...+... +..+. ..+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~ 226 (495)
T 2vvm_A 151 SALHKFTNVDGTNGRTVLPF-PHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLC-SGGTL--ENSSFGE 226 (495)
T ss_dssp HHHHHHHCSSSSTTTTTCSC-TTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHH-HSSCT--TTSBHHH
T ss_pred HHHHHHHccchhhhhhcCCC-CCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHh-cCCCc--chhhHHH
Confidence 11222222 01000000 00000000012345789999999887 8887776654322111 11111 2245554
Q ss_pred HHHHHHHHHHhhhcccCCCcceEeecCCcchHHHHHHHHHHHcC-cEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcC
Q 011414 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (486)
Q Consensus 250 ~l~~~~~~~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~ 328 (486)
.+..+......+..+... ...+++.||+++|+++|.+.+...| ++|+++++|++|..+ ++. +.|++.+|++++||
T Consensus 227 ~~~~~~~~~~~~~~~~~~-~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad 302 (495)
T 2vvm_A 227 FLHWWAMSGYTYQGCMDC-LMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE--RDA-ARVTARDGREFVAK 302 (495)
T ss_dssp HHHHHHHTTSSHHHHHHH-HHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC--SSS-EEEEETTCCEEEEE
T ss_pred HHHHHHHcCCCHHHHHhh-hceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcC
Confidence 443322110011000000 1145789999999999999999898 999999999999876 444 56888889899999
Q ss_pred EEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCC
Q 011414 329 KLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (486)
Q Consensus 329 ~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~ 376 (486)
+||+. |...+..+ .++|++|..+....+...+..+.+..+.+++++
T Consensus 303 ~vI~a~~~~~l~~i--~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 303 RVVCTIPLNVLSTI--QFSPALSTERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp EEEECCCGGGGGGS--EEESCCCHHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred EEEECCCHHHHhhe--eeCCCCCHHHHHHHHhcCCCceeEEEEEECCcc
Confidence 99964 44333443 245666665444334445666778888888875
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.84 E-value=2e-20 Score=195.42 Aligned_cols=344 Identities=13% Similarity=0.113 Sum_probs=189.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CcEEEEccCCCCCCCcccc-chhhhhhhhhcCCCCCCCCCCCccccccccccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSL-SIADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G-~~VlvlE~~~~~GG~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (486)
+..+||+|||||++||++|..|+++| ++|+|+|+++++||++.++ ..+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~------------------------------ 56 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDEN------------------------------ 56 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTT------------------------------
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCC------------------------------
Confidence 35689999999999999999999999 8999999999999999985 222
Q ss_pred cccccCCCCceEeecCCCEEEecCh-HHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCChHhHH
Q 011414 98 SRLLSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKN 176 (486)
Q Consensus 98 ~~~~~~~~~~~~idl~Gp~ll~~~~-~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~ 176 (486)
.+.+|. |++.++... .+.+++.+.. .++..... ..+++. +|+++.+|... .+ ..++...+.
T Consensus 57 ---------g~~~~~-g~~~~~~~~~~~~~l~~~~~-~~~~~~~~--~~~~~~-~g~~~~~P~~~--~~--~~l~~~~~~ 118 (484)
T 4dsg_A 57 ---------GFTWDL-GGHVIFSHYQYFDDVMDWAV-QGWNVLQR--ESWVWV-RGRWVPYPFQN--NI--HRLPEQDRK 118 (484)
T ss_dssp ---------SCEEES-SCCCBCCSBHHHHHHHHHHC-SCEEEEEC--CCEEEE-TTEEEESSGGG--CG--GGSCHHHHH
T ss_pred ---------CcEEee-CCcccccChHHHHHHHHHHh-hhhhhccC--ceEEEE-CCEEEEeCccc--hh--hhCCHHHHH
Confidence 345566 466655444 4455555543 33332222 123333 78898888421 11 223333332
Q ss_pred H-HHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHH----HHHHHHhhccCCchhhhhhhchhhH-
Q 011414 177 Q-LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS----IVLYAIAMADYDQEVSEYVLKTRDG- 250 (486)
Q Consensus 177 ~-l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~----~l~~~i~~~~~~~~~~~~~~s~~~~- 250 (486)
. +..++.. ... .....+.++.+|+++. +.+.+.+ .+...+.. . ++ .++++...
T Consensus 119 ~~~~~ll~~-~~~-------------~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~--~--~~--~~ls~~~~~ 177 (484)
T 4dsg_A 119 RCLDELVRS-HAR-------------TYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWA--V--PP--CLMSTEWVE 177 (484)
T ss_dssp HHHHHHHHH-HHC-------------CCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHS--S--CG--GGBCSSSCT
T ss_pred HHHHHHHHH-Hhc-------------cCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcC--C--CH--HHhcHHHHh
Confidence 2 2233332 100 0123467899999853 2222111 11111111 1 11 12333221
Q ss_pred -------HHH-HHHHHHhhhc--ccCCCcceEeec-CCcchHHHHHHHHHHHcCcEEEeC--CceeEEEEecCCCeEEEE
Q 011414 251 -------INR-LALYNSSIGR--FQNALGALIYPI-YGQGELPQAFCRRAAVKGCLYVLR--MPVISLLTDQNSGSYKGV 317 (486)
Q Consensus 251 -------l~~-~~~~~~s~g~--~g~~~g~~~~p~-gG~~~L~qal~r~~~~~Gg~i~l~--~~V~~I~~~~~~g~~~gV 317 (486)
+.. +...+..... ++ ..+.|.||. ||++.|+++|++.+.. .+|+++ ++|++|..+ ++ +|
T Consensus 178 ~r~~~~~l~~~~~~~~~~~~~~~~~-~~~~f~yp~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~--~~---~v 249 (484)
T 4dsg_A 178 ERVAPVDLERIRRNIQENRDDLGWG-PNATFRFPQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD--AK---TI 249 (484)
T ss_dssp TTSCCCCHHHHHHHHHHTCCCCCCS-TTSEEEEESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT--TT---EE
T ss_pred ccccCCCHHHHHHHHhhcccccCCC-ccceEEeecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec--CC---EE
Confidence 111 1111111000 11 113377886 8999999999875433 289999 569999865 45 35
Q ss_pred EeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCCC-CCceEEEeCCCCCCCC
Q 011414 318 RLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD-LSNFLVIFPPRSLFPE 395 (486)
Q Consensus 318 ~~~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~~-~~~~~~~~p~~~~~~~ 395 (486)
++++|+++.||+||++ |...+.+++.+..+++++......+...+..+....+.++.+.... .....+.+|....
T Consensus 250 ~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~--- 326 (484)
T 4dsg_A 250 TFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTS--- 326 (484)
T ss_dssp EETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTC---
T ss_pred EECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCC---
Confidence 5689999999999965 4333233321111122332222222334555556656677764321 2345667775432
Q ss_pred CCceEEEEEeCCC-CccCCCCeEEEEEEEeecc--CcchHHHHHHHHHHHHhh
Q 011414 396 QVTSIRVLQLGGN-LAVCPLGMFVLYFSALCDE--VNQGKKLLHAALSALQKL 445 (486)
Q Consensus 396 ~~~~v~v~~~~~~-~~~~P~G~~vi~~~t~~~~--~~~~~~~l~~~~~~l~~~ 445 (486)
+...+..+++- +..+|+|+.++++...... ..+.++.++.+++.|...
T Consensus 327 --~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~ 377 (484)
T 4dsg_A 327 --PFYRATVFSNYSKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLAS 377 (484)
T ss_dssp --SCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHT
T ss_pred --eEEEEEeecCCCcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHc
Confidence 23345555554 4679999988876654321 123467777787777764
No 18
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.81 E-value=2.2e-19 Score=189.26 Aligned_cols=279 Identities=15% Similarity=0.153 Sum_probs=154.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCC-CcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccccc
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G-~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (486)
.+..+||||||||++||+||..|+++| ++|+|||+++++||++.|+...
T Consensus 5 ~~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~------------------------------ 54 (516)
T 1rsg_A 5 SPAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY------------------------------ 54 (516)
T ss_dssp -CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG------------------------------
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC------------------------------
Confidence 355689999999999999999999999 9999999999999999997531
Q ss_pred cccccCCCCceEeecCCCEEEecC--hHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCCh-Hh
Q 011414 98 SRLLSQHPRNFNLDVSGPRVLFCA--DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL-ME 174 (486)
Q Consensus 98 ~~~~~~~~~~~~idl~Gp~ll~~~--~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~-~~ 174 (486)
..+.+|+ |++++... .++.+++.+.++... ...+.+ .+++...++.+...+........ .-
T Consensus 55 --------~G~~~D~-G~~~~~~~~~~~~~~~~~~lg~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (516)
T 1rsg_A 55 --------QGRKYDI-GASWHHDTLTNPLFLEEAQLSLNDG------RTRFVF-DDDNFIYIDEERGRVDHDKELLLEIV 118 (516)
T ss_dssp --------GGCEEES-SCCEECCTTTCHHHHHHHHHHHHHC------CCCEEC-CCCCCEEEETTTEECTTCTTTCHHHH
T ss_pred --------CCcEEec-CCeEEecCCCChHHHHHHHhCCCCc------ceeEEE-CCCCEEEEcCCCccccccHHHHHHHH
Confidence 1245677 57777532 355555555443211 001111 13333222221111100000000 00
Q ss_pred HHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhc------CCChHHHHHHHHHHh---h-ccCCchhhhhh
Q 011414 175 KNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKM------KLPHKIKSIVLYAIA---M-ADYDQEVSEYV 244 (486)
Q Consensus 175 k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~------~l~~~l~~~l~~~i~---~-~~~~~~~~~~~ 244 (486)
...+.++.... ... .....+.++.+|++++ .+++....++...+. . ..... ..
T Consensus 119 ~~~~~~~~~~~---~~~----------~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~----~~ 181 (516)
T 1rsg_A 119 DNEMSKFAELE---FHQ----------HLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDW----KL 181 (516)
T ss_dssp HHHHHHHHHHH---C-----------------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCT----TT
T ss_pred HHHHHHHHHHH---hhh----------ccCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCCh----HH
Confidence 11122222211 000 0123457888887642 233322222111110 0 00011 11
Q ss_pred hchhhHHHHHHHHHHhhhcccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcE
Q 011414 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (486)
Q Consensus 245 ~s~~~~l~~~~~~~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~ 324 (486)
+++.. + +.... +...++++ ++.|+++|++.+. +++|++|++|++|..+ ++..+.|++.+|++
T Consensus 182 ~s~~~-------~---~~~~~---~~~~~~~g-~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~--~~~~v~v~~~~g~~ 243 (516)
T 1rsg_A 182 LSAKD-------T---YFGHQ---GRNAFALN-YDSVVQRIAQSFP--QNWLKLSCEVKSITRE--PSKNVTVNCEDGTV 243 (516)
T ss_dssp SBHHH-------H---CCCCS---SCCEEESC-HHHHHHHHHTTSC--GGGEETTCCEEEEEEC--TTSCEEEEETTSCE
T ss_pred CChHH-------H---Hhhcc---CcchhhhC-HHHHHHHHHHhCC--CCEEEECCEEEEEEEc--CCCeEEEEECCCcE
Confidence 22211 0 00111 11356777 8899888765332 3689999999999875 33336788899999
Q ss_pred EEcCEEEEC-CCCCCCCC---------CcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCC
Q 011414 325 ILSHKLVLD-PSFTVPGS---------LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (486)
Q Consensus 325 i~A~~VI~~-p~~~~~~l---------~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~ 378 (486)
++||+||++ |...+... ...+.|+||..+....+...++.+.|.++.+++++=+
T Consensus 244 ~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~ 307 (516)
T 1rsg_A 244 YNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWS 307 (516)
T ss_dssp EEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSC
T ss_pred EECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCC
Confidence 999999975 33322110 1246778888777666677788899999999998643
No 19
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.78 E-value=6.1e-18 Score=176.20 Aligned_cols=286 Identities=11% Similarity=0.100 Sum_probs=157.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (486)
..+||+|||+|++||++|..|+++|+ +|+|+|+++++||++.+....+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~------------------------------- 51 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAG------------------------------- 51 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETT-------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCC-------------------------------
Confidence 46899999999999999999999999 8999999999999999975432
Q ss_pred cccCCCCceEeecCCCEEEec-----ChHHHHHHHh-cCccccc-chhcccceeeeccCCceeecCCCHHHHhhcccCCh
Q 011414 100 LLSQHPRNFNLDVSGPRVLFC-----ADHAVDLMLK-SGASHYL-EFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL 172 (486)
Q Consensus 100 ~~~~~~~~~~idl~Gp~ll~~-----~~~l~~~l~~-~~~~~y~-ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~ 172 (486)
+.+|+ |++++.. ...+.+++.+ .++..+. .|... ..+++..+|+.+..+.. ...+.
T Consensus 52 --------~~~d~-g~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~~~------ 114 (472)
T 1b37_A 52 --------INVEL-GANWVEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYL-AQNVYKEDGGVYDEDYV-QKRIE------ 114 (472)
T ss_dssp --------EEEES-SCCEEEEESSSSCCTHHHHHHTTSCCCEEECCCTTG-GGCEECSSSSBCCHHHH-HHHHH------
T ss_pred --------cEEee-CCeEEeccCCCCCCHHHHHHHhhcCCceeeccCccc-cceeEcCCCCCCCHHHH-HHHHH------
Confidence 34565 4776642 2357778888 7776542 22211 11233335554432110 00110
Q ss_pred HhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHH--HHHhcC---CChHHHHHHHHHH-hhccCCchhhhhhhc
Q 011414 173 MEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAE--FLTKMK---LPHKIKSIVLYAI-AMADYDQEVSEYVLK 246 (486)
Q Consensus 173 ~~k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--~l~~~~---l~~~l~~~l~~~i-~~~~~~~~~~~~~~s 246 (486)
....+.+|...+..... ..++.+.++.+ ++.+.. ....+..++.... .+. +..+. ...+
T Consensus 115 -~~~~~~~~~~~~~~~~~-----------~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s 179 (472)
T 1b37_A 115 -LADSVEEMGEKLSATLH-----------ASGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYE-FAEPP--RVTS 179 (472)
T ss_dssp -HHHHHHHHHHHHHHTSC-----------TTCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHH-HSSCG--GGBB
T ss_pred -HHHHHHHHHHHHHHhhc-----------cccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhh-hcccc--cccc
Confidence 00112222222211110 01223455443 554322 1111222222111 000 01010 1112
Q ss_pred hhhHHHHHHHHHHhhhcccCCCcceEeecCCcchHHHHHHHHHHHc--------CcEEEeCCceeEEEEecCCCeEEEEE
Q 011414 247 TRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVK--------GCLYVLRMPVISLLTDQNSGSYKGVR 318 (486)
Q Consensus 247 ~~~~l~~~~~~~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~--------Gg~i~l~~~V~~I~~~~~~g~~~gV~ 318 (486)
....+. ...| ..++.. ..+.++.||++.|+++|++.+... |++|+++++|++|..+ ++++ .|+
T Consensus 180 ~~~~~~-~~~~----~~~~~~-~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~--~~~v-~v~ 250 (472)
T 1b37_A 180 LQNTVP-LATF----SDFGDD-VYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS--PGGV-TVK 250 (472)
T ss_dssp STTTSS-CHHH----HHHCSE-EEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC--SSCE-EEE
T ss_pred hhhccc-cccc----cccCCc-eeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc--CCcE-EEE
Confidence 211110 0011 112211 113345899999999998766543 7899999999999886 4554 588
Q ss_pred eCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCC
Q 011414 319 LASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (486)
Q Consensus 319 ~~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~ 378 (486)
+.+|++++||+||++ |...+..++..+.|+||+.+....+...++.+.+..+.+++|+-+
T Consensus 251 ~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~ 311 (472)
T 1b37_A 251 TEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWP 311 (472)
T ss_dssp ETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSC
T ss_pred ECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCC
Confidence 889999999999965 433323332335667776544433444466677888888988644
No 20
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.78 E-value=9.6e-18 Score=172.37 Aligned_cols=287 Identities=15% Similarity=0.104 Sum_probs=158.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (486)
+||||||||++||+||..|+++|++|+|||+++++||++.+.+..-.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~ci--------------------------------- 48 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNV--------------------------------- 48 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSS---------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCC---------------------------------
Confidence 79999999999999999999999999999999999999998654310
Q ss_pred CCCCceEeecCCCEEEec--ChHHHHHHHhcCcccccchhcccceeee-ccCCceeec-CCCHHHHhhcccCChHhHHHH
Q 011414 103 QHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFML-DADAKLCSV-PDSRAAIFKDKSLGLMEKNQL 178 (486)
Q Consensus 103 ~~~~~~~idl~Gp~ll~~--~~~l~~~l~~~~~~~y~ef~~~~~~~~~-~~~g~~~~v-p~s~~~~f~~~~l~~~~k~~l 178 (486)
..+.+++ |++++.. ...+.+++.+.|+........ ....+ ..+++.... |... +... .-+..+
T Consensus 49 ---pg~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~ 115 (431)
T 3k7m_X 49 ---PGLRVEI-GGAYLHRKHHPRLAAELDRYGIPTAAASEF--TSFRHRLGPTAVDQAFPIPG-SEAV------AVEAAT 115 (431)
T ss_dssp ---TTCEEES-SCCCBCTTTCHHHHHHHHHHTCCEEECCCC--CEECCBSCTTCCSSSSCCCG-GGHH------HHHHHH
T ss_pred ---CCceEec-CCeeeCCCCcHHHHHHHHHhCCeeeecCCC--CcEEEEecCCeecCCCCCCH-HHHH------HHHHHH
Confidence 1223444 3554433 335566666666643221111 11111 112222111 1111 1000 111223
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHHh-hccCCchhhhhhhchhhHHHHHHHH
Q 011414 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIA-MADYDQEVSEYVLKTRDGINRLALY 257 (486)
Q Consensus 179 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i~-~~~~~~~~~~~~~s~~~~l~~~~~~ 257 (486)
.+++..........+.. .....+. +.++.+|+++.+.++..+.++...+. ...... .+++....+..+...
T Consensus 116 ~~l~~~~~~~~~~~~~~---~~~~~~~-d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~ 187 (431)
T 3k7m_X 116 YTLLRDAHRIDLEKGLE---NQDLEDL-DIPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPA----DQASALWMLQLVAAH 187 (431)
T ss_dssp HHHHHHHTTCCTTTCTT---SSSCGGG-CSBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCT----TTSBHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCcc---Ccchhhh-cCCHHHHHHhcCCCHHHHHHHHHHHHHhcCCCh----hhhhHHHHHHHHHhc
Confidence 33433333221111100 0111223 38999999998888877665432111 111111 123444333222111
Q ss_pred HHhhh--cccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC-C
Q 011414 258 NSSIG--RFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-P 334 (486)
Q Consensus 258 ~~s~g--~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~-p 334 (486)
-..+. ... ... ++.+|++.+++++. +..| +|+++++|++|..+ ++. +.|++.+|++++||+||+. |
T Consensus 188 ~~~~~~~~~~---~~~-~~~~g~~~l~~~~~---~~~g-~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad~vi~a~~ 256 (431)
T 3k7m_X 188 HYSILGVVLS---LDE-VFSNGSADLVDAMS---QEIP-EIRLQTVVTGIDQS--GDV-VNVTVKDGHAFQAHSVIVATP 256 (431)
T ss_dssp TSCHHHHHHT---CCE-EETTCTHHHHHHHH---TTCS-CEESSCCEEEEECS--SSS-EEEEETTSCCEEEEEEEECSC
T ss_pred CCccceeecc---hhh-hcCCcHHHHHHHHH---hhCC-ceEeCCEEEEEEEc--CCe-EEEEECCCCEEEeCEEEEecC
Confidence 00000 011 113 78999999988664 4567 99999999999875 444 4588889988999999964 4
Q ss_pred CCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCC
Q 011414 335 SFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (486)
Q Consensus 335 ~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~ 376 (486)
...+..+ .+.|+++..+....+....+...+...-++.++
T Consensus 257 ~~~l~~i--~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 257 MNTWRRI--VFTPALPERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp GGGGGGS--EEESCCCHHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred cchHhhe--eeCCCCCHHHHHHHHhCCCcceEEEEEEECCCC
Confidence 3333332 255666664444333444556677777788876
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.75 E-value=1.1e-17 Score=175.42 Aligned_cols=283 Identities=12% Similarity=0.091 Sum_probs=157.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (486)
..+||||||||++||+||..|+++|++|+|||+++++||++.++....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~-------------------------------- 79 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEE-------------------------------- 79 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETT--------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCC--------------------------------
Confidence 467999999999999999999999999999999999999998865211
Q ss_pred ccCCCCceEeecCCCEEEecC-hHHHHHHHhcCcccccchhccc-ceeeeccCCceeecCC---CHHHHhhcccCChHhH
Q 011414 101 LSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPD---SRAAIFKDKSLGLMEK 175 (486)
Q Consensus 101 ~~~~~~~~~idl~Gp~ll~~~-~~l~~~l~~~~~~~y~ef~~~~-~~~~~~~~g~~~~vp~---s~~~~f~~~~l~~~~k 175 (486)
..+.+|+ |++.+... ..+.+++.+.|+... .|...+ ..+++. +|.....+. .. ..+. ..+.+.++
T Consensus 80 -----~~~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~-~~~~~~~~ 149 (498)
T 2iid_A 80 -----AGWYANL-GPMRLPEKHRIVREYIRKFDLRLN-EFSQENDNAWYFI-KNIRKKVGEVKKDP-GLLK-YPVKPSEA 149 (498)
T ss_dssp -----TTEEEES-SCCCEETTCHHHHHHHHHTTCCEE-EECSCCTTSEEEE-TTEEEEHHHHHHCG-GGGC-CCCCGGGT
T ss_pred -----CCchhhc-CcccccchHHHHHHHHHHhCCCce-eecccCCccEEEe-CCeeecccccccCc-cccc-cCCCcccc
Confidence 1233455 45555443 345666777776421 221111 112111 333221110 00 0010 00111110
Q ss_pred ---------HHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcC-CChHHHHHHHHHHhhc-cCCchhhhhh
Q 011414 176 ---------NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK-LPHKIKSIVLYAIAMA-DYDQEVSEYV 244 (486)
Q Consensus 176 ---------~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~-l~~~l~~~l~~~i~~~-~~~~~~~~~~ 244 (486)
..+.+++..+.... .......+.+.++.+|+++.+ +++..+.++...+... .+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------- 214 (498)
T 2iid_A 150 GKSAGQLYEESLGKVVEELKRTN--------CSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYY------- 214 (498)
T ss_dssp TCCHHHHHHHHTHHHHHHHHHSC--------HHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGGTT-------
T ss_pred CCCHHHHHHHHHHHHHHHHhhcc--------HHHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcccchh-------
Confidence 01112222111110 000012345678999999866 5665554433211100 000
Q ss_pred hchhhHHHHHHHHHHhhhcccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCc-
Q 011414 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ- 323 (486)
Q Consensus 245 ~s~~~~l~~~~~~~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~- 323 (486)
.+...++... ..+. .+ ..+.++.||++.|+++|++.+ +.+|+++++|++|..+ +++ +.|++.+|+
T Consensus 215 ~~~~~~~~~~----~~~~-~~---~~~~~~~gG~~~l~~~l~~~l---~~~i~~~~~V~~I~~~--~~~-v~v~~~~~~~ 280 (498)
T 2iid_A 215 VSFIESLKHD----DIFA-YE---KRFDEIVDGMDKLPTAMYRDI---QDKVHFNAQVIKIQQN--DQK-VTVVYETLSK 280 (498)
T ss_dssp SBHHHHHHHH----HHHT-TC---CCEEEETTCTTHHHHHHHHHT---GGGEESSCEEEEEEEC--SSC-EEEEEECSSS
T ss_pred HHHHHHHHHH----hccc-cC---cceEEeCCcHHHHHHHHHHhc---ccccccCCEEEEEEEC--CCe-EEEEEecCCc
Confidence 0111111111 1111 11 126789999999999987654 3489999999999886 444 467666665
Q ss_pred ---EEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCC
Q 011414 324 ---DILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (486)
Q Consensus 324 ---~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~ 376 (486)
+++||+||++ |...+..+ .++|+||..+....+...++.+.+.++.+++++
T Consensus 281 ~~~~~~ad~vI~t~p~~~~~~i--~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~ 335 (498)
T 2iid_A 281 ETPSVTADYVIVCTTSRAVRLI--KFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKF 335 (498)
T ss_dssp CCCEEEESEEEECSCHHHHTTS--EEESCCCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred ccceEEeCEEEECCChHHHhhe--ecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCC
Confidence 4899999975 43333343 256667776554444556677888888889885
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.75 E-value=2.7e-17 Score=168.73 Aligned_cols=247 Identities=14% Similarity=0.151 Sum_probs=137.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G-~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (486)
..+||||||||++||+||.+|+++| ++|+|+|+++++||+++|++.++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G------------------------------- 53 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG------------------------------- 53 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT-------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC-------------------------------
Confidence 4689999999999999999999999 99999999999999999976543
Q ss_pred cccCCCCceEeecCCCEEEecC-hHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCChHhHHHH
Q 011414 100 LLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (486)
Q Consensus 100 ~~~~~~~~~~idl~Gp~ll~~~-~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l 178 (486)
+.+|. |++++... ..+.+++.+.|+... .......+.+ .+|+.. .|.. +.... +.....+
T Consensus 54 --------~~~d~-G~~~~~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~-~~g~~~-~~~~--~~~~~----~~~~~~~ 114 (424)
T 2b9w_A 54 --------RRYEM-GAIMGVPSYDTIQEIMDRTGDKVD--GPKLRREFLH-EDGEIY-VPEK--DPVRG----PQVMAAV 114 (424)
T ss_dssp --------EECCS-SCCCBCTTCHHHHHHHHHHCCCCC--SCCCCEEEEC-TTSCEE-CGGG--CTTHH----HHHHHHH
T ss_pred --------ccccc-CceeecCCcHHHHHHHHHhCCccc--cccccceeEc-CCCCEe-cccc--Ccccc----hhHHHHH
Confidence 23344 45554333 456777777776421 1111112222 355543 2211 00000 0011122
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHHHHHHHHhhccCCchhhhhhhchhhHHHHHHHHH
Q 011414 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (486)
Q Consensus 179 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~l~~~i~~~~~~~~~~~~~~s~~~~l~~~~~~~ 258 (486)
.++...+.......... .......+....|+.+|+++.+.+. +.+.+...+....+. ++ ..+++...+..+...
T Consensus 115 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~a~~~~~~~~~~- 188 (424)
T 2b9w_A 115 QKLGQLLATKYQGYDAN-GHYNKVHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYG-HF--DNVPAAYVLKYLDFV- 188 (424)
T ss_dssp HHHHHHHHTTTTTTTSS-SSSSCCCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCC-CT--TTSBHHHHHHHSCHH-
T ss_pred HHHHHHHhhhhhhcccc-cchhhhhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccC-Ch--HhcCHHHHHHhhhHh-
Confidence 23332222211100000 0000112345689999999887764 333322111111121 11 223444332211110
Q ss_pred HhhhcccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 259 ~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
......+ +..+++.+|++++++++. +.++.+++++++|++|..+ ++++ .|++.+|+ ++||+||++
T Consensus 189 ~~~~~~~---~~~~~~~~g~~~l~~~l~---~~l~~~v~~~~~V~~i~~~--~~~v-~v~~~~g~-~~ad~Vv~a 253 (424)
T 2b9w_A 189 TMMSFAK---GDLWTWADGTQAMFEHLN---ATLEHPAERNVDITRITRE--DGKV-HIHTTDWD-RESDVLVLT 253 (424)
T ss_dssp HHHHHHH---TCCBCCTTCHHHHHHHHH---HHSSSCCBCSCCEEEEECC--TTCE-EEEESSCE-EEESEEEEC
T ss_pred hhhcccC---CceEEeCChHHHHHHHHH---HhhcceEEcCCEEEEEEEE--CCEE-EEEECCCe-EEcCEEEEC
Confidence 0010011 124578999999999775 4567789999999999876 5554 58877775 899999964
No 23
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.74 E-value=3e-17 Score=171.57 Aligned_cols=303 Identities=14% Similarity=0.114 Sum_probs=153.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (486)
+..+||+|||||++||+||..|+++|++|+|||+++++||++.+..... .+....+. .
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~--~~~~~~~~--------------------~ 66 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGS--EETDLSGE--------------------T 66 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTC--EEECTTSC--------------------E
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCc--ccccccch--------------------h
Confidence 3468999999999999999999999999999999999999998876431 01111100 0
Q ss_pred cccCCCCceEeecCCCEEEecChHHHHHHHhcCcccccchhccc-ceeee-ccC----CceeecCCCHHHHhhcccCChH
Q 011414 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSID-ATFML-DAD----AKLCSVPDSRAAIFKDKSLGLM 173 (486)
Q Consensus 100 ~~~~~~~~~~idl~Gp~ll~~~~~l~~~l~~~~~~~y~ef~~~~-~~~~~-~~~----g~~~~vp~s~~~~f~~~~l~~~ 173 (486)
........+.++. |+..+.....+.+++.+.|+... .+.... ..+++ ..+ |+...+|....+.+
T Consensus 67 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------- 136 (489)
T 2jae_A 67 QKCTFSEGHFYNV-GATRIPQSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAKADTF-------- 136 (489)
T ss_dssp EECCCCTTCEEES-SCCCEETTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHHHHHH--------
T ss_pred hhhcccCCCcCCc-chhhcccHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHhhhhh--------
Confidence 0001113445666 57766555578888888887532 121111 12333 212 44443322111100
Q ss_pred hHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChH--------HHHHHHHHHhhccCCchhhhhhh
Q 011414 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHK--------IKSIVLYAIAMADYDQEVSEYVL 245 (486)
Q Consensus 174 ~k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~--------l~~~l~~~i~~~~~~~~~~~~~~ 245 (486)
..+..++......... . .......+.++.+|+++++.... +..++...-......... ...
T Consensus 137 --~~~~~l~~~~~~~~~~-~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 205 (489)
T 2jae_A 137 --GYMSELLKKATDQGAL-D------QVLSREDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEK--KPF 205 (489)
T ss_dssp --HHHHHHHHHHHHHTTT-T------TTSCHHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEEC--CCC
T ss_pred --ccHHHHHHHHHhcccc-c------cccchhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCC--CCc
Confidence 0111111111110000 0 00001123467777775321100 000000000000000000 000
Q ss_pred chhhHHH-HHHHHHHhhhcccCCCcceEeecCCcchHHHHHHHHHHHcC-cEEEeCCceeEEEEecCCCeEEEEEeCCC-
Q 011414 246 KTRDGIN-RLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASG- 322 (486)
Q Consensus 246 s~~~~l~-~~~~~~~s~g~~g~~~g~~~~p~gG~~~L~qal~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~~~G- 322 (486)
....... .+..++........ ...+.+++||++.|+++|++.+ + ++|++|++|++|..+ ++++ .|++.+|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l---~~~~i~~~~~V~~i~~~--~~~v-~v~~~~g~ 278 (489)
T 2jae_A 206 AMQEVIRSGIGRNFSFDFGYDQ-AMMMFTPVGGMDRIYYAFQDRI---GTDNIVFGAEVTSMKNV--SEGV-TVEYTAGG 278 (489)
T ss_dssp CHHHHHHHTTTTTGGGGGCTTT-SSSEEEETTCTTHHHHHHHHHH---CGGGEETTCEEEEEEEE--TTEE-EEEEEETT
T ss_pred CHHHHhhhhHHHHHhhhhcccc-CccEEeecCCHHHHHHHHHHhc---CCCeEEECCEEEEEEEc--CCeE-EEEEecCC
Confidence 0000000 00011111000111 1237789999999999887644 4 789999999999887 5554 4766676
Q ss_pred --cEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCC
Q 011414 323 --QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (486)
Q Consensus 323 --~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~ 376 (486)
++++||+||++ |...+..+. + ++|..+....+...+..+.+..+.+++++
T Consensus 279 ~~~~~~ad~vI~a~p~~~l~~l~--~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~ 331 (489)
T 2jae_A 279 SKKSITADYAICTIPPHLVGRLQ--N--NLPGDVLTALKAAKPSSSGKLGIEYSRRW 331 (489)
T ss_dssp EEEEEEESEEEECSCHHHHTTSE--E--CCCHHHHHHHHTEECCCEEEEEEEESSCH
T ss_pred eEEEEECCEEEECCCHHHHHhCc--c--CCCHHHHHHHHhCCCccceEEEEEeCCCC
Confidence 67999999975 444334442 1 34433333223344667788888888874
No 24
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.64 E-value=4.7e-15 Score=149.81 Aligned_cols=311 Identities=13% Similarity=0.130 Sum_probs=166.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccc-hhhhhhhhhcCCCCCCCCCCCccccccccccc
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (486)
+...+||+|||||++||++|..|+++|++|+|+|+++++||++.+.. .++
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G----------------------------- 76 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAG----------------------------- 76 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTS-----------------------------
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCC-----------------------------
Confidence 44679999999999999999999999999999999999999999864 222
Q ss_pred cccccCCCCceEe-ecCCCEEEecC-hHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHh--hcccCChH
Q 011414 98 SRLLSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF--KDKSLGLM 173 (486)
Q Consensus 98 ~~~~~~~~~~~~i-dl~Gp~ll~~~-~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f--~~~~l~~~ 173 (486)
+.+ +. |++++... ..+.+++.+.+... .+. ...+++. +|+++++|.+...+. ....+++.
T Consensus 77 ----------~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~-~g~l~~lP~~~~~~~~l~~~~~~~~ 140 (397)
T 3hdq_A 77 ----------VLIHPY-GPHIFHTNSKDVFEYLSRFTEWR--PYQ--HRVLASV-DGQLLPIPINLDTVNRLYGLNLTSF 140 (397)
T ss_dssp ----------CEECTT-SCCCCEESCHHHHHHHHTSCCEE--ECC--CBEEEEE-TTEEEEESCCHHHHHHHHTCCCCHH
T ss_pred ----------ceEeec-CCcccCCChHHHHHHHHHhhhcc--ccc--ccceEEE-CCEEEEcCCChHHHHHhhccCCCHH
Confidence 222 33 56666543 35677777766321 111 1223443 899999998754321 11223332
Q ss_pred hHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHH-HHH-HHHhhccCCchhhhhhhchhhHH
Q 011414 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGI 251 (486)
Q Consensus 174 ~k~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~-~l~-~~i~~~~~~~~~~~~~~s~~~~l 251 (486)
.+..++.. .. .....+.++.+|+.+. +.+.+.+ ++. +.-.. +..++ +++|+...
T Consensus 141 ---~~~~~l~~-~~--------------~~~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~--~~~~~--~~Lsa~~~- 196 (397)
T 3hdq_A 141 ---QVEEFFAS-VA--------------EKVEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQ--WGLDP--SELDASVT- 196 (397)
T ss_dssp ---HHHHHHHH-HC--------------CCCSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHH--HSSCG--GGSBTTTG-
T ss_pred ---HHHHHHhh-cc--------------cCCCCCcCHHHHHHHh-cCHHHHHHHHHHHhCch--hCCCH--HHHHHHHH-
Confidence 22233321 11 1123467999999752 2223333 222 11122 22222 23555321
Q ss_pred HHHHHHHHhhhcccCCCcce-EeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEE
Q 011414 252 NRLALYNSSIGRFQNALGAL-IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKL 330 (486)
Q Consensus 252 ~~~~~~~~s~g~~g~~~g~~-~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~V 330 (486)
.++......-.++.+ +.+ .+|++|.+.|.++|. +..|++|+||++|.++ +.++.+|+|
T Consensus 197 ~Rvp~~~~~d~~yf~--~~~qg~P~gGy~~l~e~l~---~~~g~~V~l~~~v~~~----------------~~~~~~d~v 255 (397)
T 3hdq_A 197 ARVPTRTNRDNRYFA--DTYQAMPLHGYTRMFQNML---SSPNIKVMLNTDYREI----------------ADFIPFQHM 255 (397)
T ss_dssp GGSCCCSSCCCBSCC--CSEEEEETTCHHHHHHHHT---CSTTEEEEESCCGGGT----------------TTTSCEEEE
T ss_pred HhcCcccccCccchh--hhheeccCCCHHHHHHHHH---hccCCEEEECCeEEec----------------cccccCCEE
Confidence 111100000001111 224 479999999998764 4679999999999832 223458899
Q ss_pred EECCCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCceEEEEEeCCCCc
Q 011414 331 VLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGGNLA 410 (486)
Q Consensus 331 I~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~v~~~~~~~~ 410 (486)
|++.+. ..+ ++.. . .......+......++.+..+ ....+.+|... + .-.+.++.+-++
T Consensus 256 I~T~P~--d~~---~~~~----~----g~L~yrsl~~~~~~~~~~~~~--~~~~vn~~d~~-p-----~tRi~e~k~~~~ 314 (397)
T 3hdq_A 256 IYTGPV--DAF---FDFC----Y----GKLPYRSLEFRHETHDTEQLL--PTGTVNYPNDY-A-----YTRVSEFKHITG 314 (397)
T ss_dssp EECSCH--HHH---TTTT----T----CCCCEEEEEEEEEEESSSCSC--SSSEEECSSSS-S-----CSEEEEHHHHHC
T ss_pred EEcCCH--HHH---HHHh----c----CCCCCceEEEEEEEeccccCC--CCeEEEeCCCC-c-----ceEEEeecccCC
Confidence 964221 111 1100 0 011222232222334544222 35678887432 2 235666655433
Q ss_pred cCCCCeEEEEEEEeecc--------CcchHHHHHHHHHH
Q 011414 411 VCPLGMFVLYFSALCDE--------VNQGKKLLHAALSA 441 (486)
Q Consensus 411 ~~P~G~~vi~~~t~~~~--------~~~~~~~l~~~~~~ 441 (486)
. |.++++|..-..+.. ..+..+.++.+.+.
T Consensus 315 ~-~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~ 352 (397)
T 3hdq_A 315 Q-RHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEAL 352 (397)
T ss_dssp C-CCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHH
T ss_pred C-CCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHH
Confidence 2 456777765544421 12345666666555
No 25
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.64 E-value=8.9e-17 Score=163.69 Aligned_cols=300 Identities=12% Similarity=0.080 Sum_probs=157.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~-G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (486)
.++||||||||++||+||..|+++ |++|+|+|+++++||++.+...+.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 54 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQ------------------------------- 54 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTT-------------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccC-------------------------------
Confidence 479999999999999999999999 999999999999999999976420
Q ss_pred cccCCCCceEeecCCCEEEec-ChHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHH---HhhcccCChHhH
Q 011414 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAA---IFKDKSLGLMEK 175 (486)
Q Consensus 100 ~~~~~~~~~~idl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~---~f~~~~l~~~~k 175 (486)
.++.+|..|++++.. ...+.+++.+.++. ..+. ...+++ .+|+.+++|.+... ++.. .+.+.+
T Consensus 55 ------~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~--~~~~--~~~~~~-~~G~~~~~p~~~~~~~~l~~~-~~~~~~- 121 (399)
T 1v0j_A 55 ------TGIEVHKYGAHLFHTSNKRVWDYVRQFTDF--TDYR--HRVFAM-HNGQAYQFPMGLGLVSQFFGK-YFTPEQ- 121 (399)
T ss_dssp ------TCCEEETTSCCCEEESCHHHHHHHTTTCCB--CCCC--CCEEEE-ETTEEEEESSSHHHHHHHHTS-CCCHHH-
T ss_pred ------CCEEEEeCCCcEEcCCcHHHHHHHHHhhhh--hccc--cceEEE-ECCEEEeCCCCHHHHHHHhcc-cCCHHH-
Confidence 123343125666644 34677777777752 1221 122333 37899988876422 2221 112222
Q ss_pred HHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChH-HHHHHH-HHHhhccCCchhhhhhhchhhHHHH
Q 011414 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHK-IKSIVL-YAIAMADYDQEVSEYVLKTRDGINR 253 (486)
Q Consensus 176 ~~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~-l~~~l~-~~i~~~~~~~~~~~~~~s~~~~l~~ 253 (486)
+.+++...... .....+.++.+|+.+. +.+. .+.++. +....... ++ .++++... .+
T Consensus 122 --~~~~l~~~~~~-------------~~~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~--~~--~~ls~~~~-~~ 180 (399)
T 1v0j_A 122 --ARQLIAEQAAE-------------IDTADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQT--DP--KELPAANI-TR 180 (399)
T ss_dssp --HHHHHHHHGGG-------------SCTTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTS--CG--GGSCGGGC-SC
T ss_pred --HHHHHHHHhhc-------------cCCCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCC--Ch--hhcChHhh-hc
Confidence 22222221110 0112356788888863 3333 333332 11122111 21 22444322 00
Q ss_pred HHHHHHhhhcccCCCcceE-eecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEE-EcCEEE
Q 011414 254 LALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI-LSHKLV 331 (486)
Q Consensus 254 ~~~~~~s~g~~g~~~g~~~-~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i-~A~~VI 331 (486)
+.........+.. ..+. +|+||+++|+++|++ .+|++|+||++|++|.. . | +++ .||+||
T Consensus 181 ~~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~I~~---~-----v-----~~~~~aD~VI 242 (399)
T 1v0j_A 181 LPVRYTFDNRYFS--DTYEGLPTDGYTAWLQNMAA---DHRIEVRLNTDWFDVRG---Q-----L-----RPGSPAAPVV 242 (399)
T ss_dssp CCCCSSSCCCSCC--CSEEECBTTHHHHHHHHHTC---STTEEEECSCCHHHHHH---H-----H-----TTTSTTCCEE
T ss_pred ceeEeccccchhh--hhhcccccccHHHHHHHHHh---cCCeEEEECCchhhhhh---h-----h-----hhcccCCEEE
Confidence 0000000001111 1253 999999999998764 67899999999999842 1 2 135 699999
Q ss_pred EC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCceEEEEEeCCC-C
Q 011414 332 LD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGGN-L 409 (486)
Q Consensus 332 ~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~v~~~~~~-~ 409 (486)
++ |...+.++. + ....+..+....+..+.+..+ ....+.+|..... . ..+..+..- .
T Consensus 243 ~t~p~~~l~~~~-------------l-~~l~y~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~--~ri~~~~~~~~ 301 (399)
T 1v0j_A 243 YTGPLDRYFDYA-------------E-GRLGWRTLDFEVEVLPIGDFQ--GTAVMNYNDLDVP---Y--TRIHEFRHFHP 301 (399)
T ss_dssp ECSCHHHHTTTT-------------T-CCCCEEEEEEEEEEESSSCSS--SSSEEEECCTTSS---C--SEEEEGGGGCT
T ss_pred ECCcHHHHHhhh-------------h-CCCCcceEEEEEEEEccccCC--CCeEEEeCCCCCC---c--ceeEeecCCCC
Confidence 75 322212221 0 111222223333345655322 2346777743221 1 234445443 3
Q ss_pred ccC-CCCeEEEEEEEe
Q 011414 410 AVC-PLGMFVLYFSAL 424 (486)
Q Consensus 410 ~~~-P~G~~vi~~~t~ 424 (486)
... |+++.+|++...
T Consensus 302 ~~~~~~~~~~v~~e~~ 317 (399)
T 1v0j_A 302 ERDYPTDKTVIMREYS 317 (399)
T ss_dssp TSCCCSSCEEEEEEEE
T ss_pred CCcCCCCCeEEEEeec
Confidence 454 667778777653
No 26
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.63 E-value=9.2e-15 Score=146.53 Aligned_cols=47 Identities=17% Similarity=0.340 Sum_probs=43.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccC-CCCCCCccccch
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN-PFYGSHFSSLSI 66 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~-~~~GG~~~s~~~ 66 (486)
+..+||+|||||++||+||+.|+++|++|+|||++ +++||++.++..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~ 89 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHA 89 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecc
Confidence 45689999999999999999999999999999999 999999998763
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.61 E-value=5.7e-16 Score=155.89 Aligned_cols=226 Identities=13% Similarity=0.168 Sum_probs=128.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCccccccccccccccc
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (486)
++||+|||+|++||++|.+|+++|++|+|+|+++++||++.++..++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g--------------------------------- 47 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEG--------------------------------- 47 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETT---------------------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCC---------------------------------
Confidence 37999999999999999999999999999999999999999875322
Q ss_pred cCCCCceEeecCCCEEEecCh-HHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhcccCChHhHHHHHH
Q 011414 102 SQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMR 180 (486)
Q Consensus 102 ~~~~~~~~idl~Gp~ll~~~~-~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~l~~~~k~~l~~ 180 (486)
+.+|..||+++.... .+.+++.+.+.. ..+... .+.+ .+|+.+.+|.+...+... +.......+.+
T Consensus 48 ------~~~~~~G~~~~~~~~~~~~~~~~~l~~~--~~~~~~--~~~~-~~g~~~~~p~~~~~~~~l--~~~~~~~~~~~ 114 (367)
T 1i8t_A 48 ------IQIHKYGAHIFHTNDKYIWDYVNDLVEF--NRFTNS--PLAI-YKDKLFNLPFNMNTFHQM--WGVKDPQEAQN 114 (367)
T ss_dssp ------EEEETTSCCCEEESCHHHHHHHHTTSCB--CCCCCC--CEEE-ETTEEEESSBSHHHHHHH--HCCCCHHHHHH
T ss_pred ------ceeeccCCceecCCCHHHHHHHHHhhhh--hhcccc--ceEE-ECCeEEEcCCCHHHHHHH--hccCCHHHHHH
Confidence 334312577665443 556666655531 122211 1222 378888888765332211 11011223344
Q ss_pred HHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHH-HHH-HHHhhccCCchhhhhhhchhhHHHHHHHHH
Q 011414 181 FFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (486)
Q Consensus 181 fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~-~l~-~~i~~~~~~~~~~~~~~s~~~~l~~~~~~~ 258 (486)
|+...... .....+.++.+|+.+. +.+.+.+ ++. +....... ++ .++++... .++....
T Consensus 115 ~l~~~~~~-------------~~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~--~~--~~lsa~~~-~~l~~~~ 175 (367)
T 1i8t_A 115 IINAQKKK-------------YGDKVPENLEEQAISL-VGEDLYQALIKGYTEKQWGR--SA--KELPAFII-KRIPVRF 175 (367)
T ss_dssp HHHHHTTT-------------TCCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSS--CG--GGSCTTSS-CCCCBCS
T ss_pred HHHHHhhc-------------cCCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCC--Ch--HHcCHHHH-hhceeee
Confidence 44432221 0112457899999865 3333333 222 11122222 22 22444321 0000000
Q ss_pred HhhhcccCCCcceE-eecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 259 SSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 259 ~s~g~~g~~~g~~~-~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
..-..+. .+.+. +|+||+++|+++|++ |++|+||++|++|. . + | .+.+|+||++
T Consensus 176 ~~~~~~~--~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V~~i~----~-~---v------~~~~D~VV~a 230 (367)
T 1i8t_A 176 TFDNNYF--SDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDFLKDK----D-S---L------ASKAHRIIYT 230 (367)
T ss_dssp SSCCCSC--CCSEEECBTTCHHHHHHHHHT-----TSEEECSCCGGGSH----H-H---H------HTTEEEEEEC
T ss_pred ccccccc--cchhhcccCCCHHHHHHHHhc-----CCEEEeCCceeeec----h-h---h------hccCCEEEEe
Confidence 0000111 12353 999999999998865 68999999999873 1 1 2 2458999964
No 28
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.58 E-value=5.5e-14 Score=153.65 Aligned_cols=99 Identities=13% Similarity=0.050 Sum_probs=71.8
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhh
Q 011414 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQL 349 (486)
Q Consensus 271 ~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l 349 (486)
.....+|++.|.+++++ |.+|+++++|++|..+ ++. +.|++.+|++++||+||+. |...+......+.|+|
T Consensus 526 ~~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~--~~~-v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~L 597 (776)
T 4gut_A 526 HTLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYS--GDE-VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPL 597 (776)
T ss_dssp EEECTTCTHHHHHHHHT-----TSCEESSCCEEEEECS--SSS-EEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCC
T ss_pred eEEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEc--CCE-EEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCC
Confidence 55678999999987753 6789999999999876 444 4688889999999999965 4433222112467777
Q ss_pred hhhhhhhccCCCcceEEEEEEEecCCCC
Q 011414 350 QESFQAFSLSDNKGKVARGICITRSSLK 377 (486)
Q Consensus 350 ~~~~~~l~~~~~~~~v~r~i~i~~~~~~ 377 (486)
|..+....+....+.+.+.++.+++++-
T Consensus 598 p~~~~~ai~~l~~g~~~KV~l~f~~~FW 625 (776)
T 4gut_A 598 SEKKMKAINSLGAGIIEKIALQFPYRFW 625 (776)
T ss_dssp CHHHHHHHHHEEEECCEEEEEECSSCTT
T ss_pred CHHHHHHHHhCCCeeEEEEEEecCcccc
Confidence 7765554444556778888888999863
No 29
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.57 E-value=2.4e-15 Score=152.24 Aligned_cols=214 Identities=13% Similarity=0.145 Sum_probs=123.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (486)
+++||+|||+|++||++|..|+++|++|+|+|+++++||++.+...+.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~-------------------------------- 49 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSE-------------------------------- 49 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTT--------------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccC--------------------------------
Confidence 458999999999999999999999999999999999999999875421
Q ss_pred ccCCCCceEe-ecCCCEEEecC-hHHHHHHHhcCcccccchhcccceeeeccCCceeecCCCHHHHhhc--ccCChHhHH
Q 011414 101 LSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKD--KSLGLMEKN 176 (486)
Q Consensus 101 ~~~~~~~~~i-dl~Gp~ll~~~-~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~--~~l~~~~k~ 176 (486)
.++.+ |. |++++... ..+.+++.+.+... .+. ...+++ .+|+.+.+|.+...+... ..+++.
T Consensus 50 -----~g~~~~~~-G~~~~~~~~~~~~~~~~~l~~~~--~~~--~~~~~~-~~g~~~~~P~~~~~~~~l~~~~~~~~--- 115 (384)
T 2bi7_A 50 -----TNVMVHVY-GPHIFHTDNETVWNYVNKHAEMM--PYV--NRVKAT-VNGQVFSLPINLHTINQFFSKTCSPD--- 115 (384)
T ss_dssp -----TCCEEETT-SCCCEEESCHHHHHHHHTTSCEE--ECC--CCEEEE-ETTEEEEESCCHHHHHHHTTCCCCHH---
T ss_pred -----CCceEeeC-CceEECCCCHHHHHHHHHHhhhc--ccc--cceEEE-ECCEEEECCCChhHHHHHhcccCCHH---
Confidence 12333 33 57766543 36677777766421 121 112233 378888888875322111 111222
Q ss_pred HHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChHHHH-HHH-HHHhhccCCchhhhhhhchhhHHHHH
Q 011414 177 QLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGINRL 254 (486)
Q Consensus 177 ~l~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~-~l~-~~i~~~~~~~~~~~~~~s~~~~l~~~ 254 (486)
.+.+++...... . ...+.++.+|+.+. +.+.+.+ ++. +...... .++ .++++... .++
T Consensus 116 ~~~~~l~~~~~~-------------~-~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~--~~~--~~ls~~~~-~r~ 175 (384)
T 2bi7_A 116 EARALIAEKGDS-------------T-IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWG--MQP--SELPASIL-KRL 175 (384)
T ss_dssp HHHHHHHHHSCC-------------S-CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHS--SCG--GGSBGGGC-CSC
T ss_pred HHHHHHHHhhhc-------------c-CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhC--CCH--HHhCHHHH-hcc
Confidence 223333322110 0 12467899999865 3444433 322 2212222 222 22443321 000
Q ss_pred HHHHHhhhcccCCCcceE-eecCCcchHHHHHHHHHHHcCcEEEeCCcee-EE
Q 011414 255 ALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVI-SL 305 (486)
Q Consensus 255 ~~~~~s~g~~g~~~g~~~-~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~-~I 305 (486)
.........+.. +.+. +|+||+++|+++|++ ..|++|+||++|+ +|
T Consensus 176 ~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~~i 223 (384)
T 2bi7_A 176 PVRFNYDDNYFN--HKFQGMPKCGYTQMIKSILN---HENIKVDLQREFIVEE 223 (384)
T ss_dssp CCCSSSCCCSCC--CSEEEEETTHHHHHHHHHHC---STTEEEEESCCCCGGG
T ss_pred cccccccccccc--ccccEEECcCHHHHHHHHHh---cCCCEEEECCeeehhh
Confidence 000000001111 2353 999999999998864 5789999999999 77
No 30
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.51 E-value=3.6e-13 Score=145.69 Aligned_cols=101 Identities=11% Similarity=-0.031 Sum_probs=73.2
Q ss_pred ceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCC------CcEEEcCEEEEC-CCCCCCCCC
Q 011414 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGSL 342 (486)
Q Consensus 270 ~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~------G~~i~A~~VI~~-p~~~~~~l~ 342 (486)
.+..+.||++.|+++|++ +..|+||++|++|..+ ++. +.|++.+ |++++||+||++ |...+.++.
T Consensus 392 ~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~--~~~-v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~ 463 (662)
T 2z3y_A 392 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 463 (662)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEE--TTE-EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEEC--CCc-EEEEEeecccCCCCeEEEeCEEEECCCHHHHhccc
Confidence 356789999999998865 4589999999999987 443 4566554 568999999975 443333311
Q ss_pred --cccchhhhhhhhhhccCCCcceEEEEEEEecCCCCC
Q 011414 343 --ASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (486)
Q Consensus 343 --~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~ 378 (486)
..+.|+||..+....+...++.+.|.++.+++++-+
T Consensus 464 ~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~ 501 (662)
T 2z3y_A 464 PAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 501 (662)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred CceEEcCCCCHHHHHHHHhCCccceeEEEEEcCccccc
Confidence 236778887655544555678889999999998744
No 31
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.51 E-value=3.2e-13 Score=148.59 Aligned_cols=101 Identities=11% Similarity=-0.031 Sum_probs=72.5
Q ss_pred ceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCC------CcEEEcCEEEEC-CCCCCCCCC
Q 011414 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGSL 342 (486)
Q Consensus 270 ~~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~------G~~i~A~~VI~~-p~~~~~~l~ 342 (486)
.++.++||++.|+++|++ +..|+||++|++|..+ ++. +.|++.+ |++++||+||++ |...+..+.
T Consensus 563 ~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~--~~g-V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~ 634 (852)
T 2xag_A 563 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 634 (852)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEE--TTE-EEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEc--CCc-EEEEEeecccCCCCeEEECCEEEECCCHHHHHhhh
Confidence 367899999999998865 3479999999999987 444 4566544 568999999976 443333321
Q ss_pred --cccchhhhhhhhhhccCCCcceEEEEEEEecCCCCC
Q 011414 343 --ASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (486)
Q Consensus 343 --~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~~ 378 (486)
..+.|+||..+....+...++.+.+.++.+++++-+
T Consensus 635 ~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~ 672 (852)
T 2xag_A 635 PAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 672 (852)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred cccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccC
Confidence 236778887655544555677888988889998644
No 32
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.46 E-value=1.8e-13 Score=146.78 Aligned_cols=105 Identities=9% Similarity=-0.019 Sum_probs=70.3
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCcee--EEEEecCCC-----eEEEE-EeCCCc--EEEcCEEEEC-CCCCC-
Q 011414 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVI--SLLTDQNSG-----SYKGV-RLASGQ--DILSHKLVLD-PSFTV- 338 (486)
Q Consensus 271 ~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~--~I~~~~~~g-----~~~gV-~~~~G~--~i~A~~VI~~-p~~~~- 338 (486)
+.++.||++.|+++|.+.+. .|+.|+|+++|+ +|..+. ++ ..+.| ...+|+ ++.||+||++ |...+
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~-~g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~ 416 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQ-NVGAGKLVVQVRQERVANAC-HSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLT 416 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHH-HHTTTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHH
T ss_pred eeEECCcHHHHHHHHHHhcc-cCCceEeCCEEEeeeEEECC-CCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHh
Confidence 66899999999999987653 278899999999 998863 33 13456 446777 7899999974 43221
Q ss_pred -----CCCC-------c---------cc---chh-h-h-------hhhhhhccCCCcceEEEEEEEe-----cCCCC
Q 011414 339 -----PGSL-------A---------SS---HQQ-L-Q-------ESFQAFSLSDNKGKVARGICIT-----RSSLK 377 (486)
Q Consensus 339 -----~~l~-------~---------~~---~~~-l-~-------~~~~~l~~~~~~~~v~r~i~i~-----~~~~~ 377 (486)
..+. . ++ .++ | | ..+....++..++...|..+.+ ++||=
T Consensus 417 ~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW 493 (721)
T 3ayj_A 417 PIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWV 493 (721)
T ss_dssp HHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTS
T ss_pred hccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcc
Confidence 1110 0 00 222 3 4 4444444666788889998888 78863
No 33
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.45 E-value=2.5e-12 Score=127.82 Aligned_cols=99 Identities=10% Similarity=-0.001 Sum_probs=70.7
Q ss_pred EeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhh
Q 011414 272 IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQ 350 (486)
Q Consensus 272 ~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~ 350 (486)
+.+.+|+..+.++|++. .|++|+++++|++|..+ +++ +.|++.+|++++||.||+. |.....+|+...++.+|
T Consensus 105 ~~~~~g~~~l~~~l~~~---~g~~i~~~~~V~~i~~~--~~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~ 178 (342)
T 3qj4_A 105 FVAPQGISSIIKHYLKE---SGAEVYFRHRVTQINLR--DDK-WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLIS 178 (342)
T ss_dssp EECTTCTTHHHHHHHHH---HTCEEESSCCEEEEEEC--SSS-EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSC
T ss_pred eecCCCHHHHHHHHHHh---cCCEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccC
Confidence 46788999999988764 38999999999999886 444 4688888988999999964 54433455433344555
Q ss_pred hhhhhhccCCCcceEEEEEEEecCCC
Q 011414 351 ESFQAFSLSDNKGKVARGICITRSSL 376 (486)
Q Consensus 351 ~~~~~l~~~~~~~~v~r~i~i~~~~~ 376 (486)
+......+...+..+.+..+.+++++
T Consensus 179 ~~~~~~l~~~~~~~~~~v~l~~~~~~ 204 (342)
T 3qj4_A 179 ECQRQQLEAVSYSSRYALGLFYEAGT 204 (342)
T ss_dssp HHHHHHHHTCCBCCEEEEEEECSSCC
T ss_pred HHHHHHHhcCCccccEEEEEEECCCC
Confidence 54444334556777888788888763
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.24 E-value=3.3e-11 Score=120.24 Aligned_cols=61 Identities=18% Similarity=0.209 Sum_probs=48.1
Q ss_pred eEeecCC---cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCC--cEEEcCEEEEC
Q 011414 271 LIYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG--QDILSHKLVLD 333 (486)
Q Consensus 271 ~~~p~gG---~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G--~~i~A~~VI~~ 333 (486)
...|..| ...+.++|.+.++..|++++++++|++|..+ ++..+.|++.+| .+++||.||..
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 139 LVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred eECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEEC
Confidence 3455555 2588999999999999999999999999886 444356888888 47999999853
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.20 E-value=1.6e-10 Score=118.76 Aligned_cols=60 Identities=22% Similarity=0.223 Sum_probs=51.6
Q ss_pred eEeecC-C---cchHHHHHHHHHHHcCcEEEeCC---ceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 271 LIYPIY-G---QGELPQAFCRRAAVKGCLYVLRM---PVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 271 ~~~p~g-G---~~~L~qal~r~~~~~Gg~i~l~~---~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
++.+.+ | ...+.++|.+.++..|++|++++ +|++|..+ ++++++|++.+|++++||+||+
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~~G~~i~Ad~VV~ 215 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTADGKIWRAERTFL 215 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEETTTEEEECSEEEE
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEEECCCCEEECCEEEE
Confidence 455666 5 25889999999999999999999 99999887 7788889999998999999985
No 36
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.12 E-value=5.2e-09 Score=103.04 Aligned_cols=43 Identities=28% Similarity=0.366 Sum_probs=40.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~ 65 (486)
+||||||||++||++|+.|+++|.+|+||||++.+||++.+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~ 45 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR 45 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe
Confidence 6999999999999999999999999999999999999888753
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.12 E-value=5.5e-10 Score=121.20 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=50.1
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+|.+|. ..+.++|.+.++..|++|+++++|++|..+ +++ ++|++.+|++++||.||+
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~i~Ad~VVl 467 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK--DDC-WLLNFAGDQQATHSVVVL 467 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEE
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe--CCe-EEEEECCCCEEECCEEEE
Confidence 45666664 588999999999999999999999999987 555 588888888999999985
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.11 E-value=9.4e-10 Score=110.29 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=48.8
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
+++|.+|. ..+.++|.+.++..|++|+++++|++|..+ +++ ++|++.+| +++||+||+.
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-~~V~t~~g-~i~a~~VV~A 204 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV--DGA-WEVRCDAG-SYRAAVLVNA 204 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE--TTE-EEEECSSE-EEEESEEEEC
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe--CCe-EEEEeCCC-EEEcCEEEEC
Confidence 45666663 588999999999999999999999999887 555 68887777 8999999953
No 39
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.06 E-value=9.1e-11 Score=110.76 Aligned_cols=45 Identities=27% Similarity=0.334 Sum_probs=42.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccchh
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIA 67 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~ 67 (486)
+||+|||||++||+||..|+++|++|+||||++.+||++.+...+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~ 47 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSD 47 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEET
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccC
Confidence 799999999999999999999999999999999999999876543
No 40
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.05 E-value=5e-09 Score=109.77 Aligned_cols=42 Identities=26% Similarity=0.383 Sum_probs=39.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
.++||||||+|++||+||+.|+++|++|+||||.+..||...
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA 81 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch
Confidence 469999999999999999999999999999999999998753
No 41
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.03 E-value=8.9e-10 Score=112.35 Aligned_cols=58 Identities=10% Similarity=0.113 Sum_probs=48.6
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+|......+.++|.+.++..|++|+++++|++|..+ ++. +.|++.+| +++||.||+
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~--~~~-~~V~~~~g-~i~ad~VIl 181 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT--ASG-FRVTTSAG-TVDAASLVV 181 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTE-EEEEETTE-EEEESEEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCE-EEEEECCc-EEEeeEEEE
Confidence 35676666799999999999999999999999999876 444 67888777 899999984
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.03 E-value=1.6e-09 Score=117.66 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=48.7
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCc-EEEcCEEEE
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~-~i~A~~VI~ 332 (486)
+.+|.+|. ..+.++|.+.++..|++|+++++|++|..+ +++ +.|++.+|+ +++||.||+
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~~i~Ad~VVl 463 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI--DSQ-WQLTFGQSQAAKHHATVIL 463 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC--SSS-EEEEEC-CCCCEEESEEEE
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe--CCe-EEEEeCCCcEEEECCEEEE
Confidence 55676664 588999999999999999999999999886 444 578888887 899999985
No 43
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.02 E-value=5.7e-09 Score=104.84 Aligned_cols=60 Identities=25% Similarity=0.244 Sum_probs=48.9
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
++.|..|. ..+.++|.+.++..|++++.+++|++|..+ ++++++|++.+| +++||.||..
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~~g-~i~a~~VV~A 200 (382)
T 1y56_B 138 SWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE--NNEIKGVKTNKG-IIKTGIVVNA 200 (382)
T ss_dssp EEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTE-EEECSEEEEC
T ss_pred EEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE--CCEEEEEEECCc-EEECCEEEEC
Confidence 44565553 578899999999999999999999999876 667777888777 7999999853
No 44
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.01 E-value=1.2e-08 Score=103.22 Aligned_cols=60 Identities=25% Similarity=0.346 Sum_probs=50.0
Q ss_pred eEeecCCcc---hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 271 LIYPIYGQG---ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 271 ~~~p~gG~~---~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++|..|.. .+.++|.+.++..|++++++++|++|..+ ++++++|++.+| +++||.||..
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g-~~~a~~vV~a 225 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD--GEKVTGVKTTRG-TIHAGKVALA 225 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTC-CEEEEEEEEC
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe--CCEEEEEEeCCc-eEECCEEEEC
Confidence 556766654 78899999999999999999999999876 667788988777 7999998853
No 45
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.99 E-value=3.5e-09 Score=109.08 Aligned_cols=60 Identities=20% Similarity=0.327 Sum_probs=51.1
Q ss_pred eEeecCC-cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 271 LIYPIYG-QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG-~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+|..+ ...+.++|.+.++..|++|+++++|++|..+ ++++++|++.+|++++||.||+
T Consensus 125 ~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 125 RMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE--NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTCCEEECSCEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec--CCcEEEEEECCCCEEECCEEEE
Confidence 3567554 4688999999999999999999999999887 6777899998898899999884
No 46
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.98 E-value=2.7e-08 Score=105.64 Aligned_cols=53 Identities=17% Similarity=0.235 Sum_probs=44.6
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeC--CCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA--SGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~--~G~--~i~A~~VI~ 332 (486)
..+.+.|.+.++..|++|+++++|++|..++ ++++++|++. +|+ +++||.||+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~a~~VVl 311 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD-KGTVKGILVKGMYKGYYWVKADAVIL 311 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECT-TSCEEEEEEEETTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC-CCeEEEEEEEeCCCcEEEEECCeEEE
Confidence 5788999999999999999999999998861 3788888765 676 689999885
No 47
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.97 E-value=1.8e-08 Score=107.00 Aligned_cols=59 Identities=22% Similarity=0.193 Sum_probs=47.9
Q ss_pred EeecCC---cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCC-CeEEEEEeC--CCc--EEEcCEEEE
Q 011414 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (486)
Q Consensus 272 ~~p~gG---~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~-g~~~gV~~~--~G~--~i~A~~VI~ 332 (486)
.+|.+| ...+.++|.+.++..|++|+++++|++|..+ + +++++|++. +|+ +++||.||+
T Consensus 240 ~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVl 306 (566)
T 1qo8_A 240 HRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVL 306 (566)
T ss_dssp EECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEE
T ss_pred eecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEE
Confidence 345554 2578899999999999999999999999886 5 888888765 676 689998885
No 48
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.93 E-value=3.9e-09 Score=110.90 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=46.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
..+.++|.+.++..|++|+++++|++|..+ ++++++|++.+|+++.||.||+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~~G~~i~Ad~VVlA 272 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME--DGQITGVTLSNGEEIKSRHVVLA 272 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES--SSBEEEEEETTSCEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 467788888888899999999999999876 67788899999999999999953
No 49
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.87 E-value=4.1e-08 Score=108.95 Aligned_cols=60 Identities=25% Similarity=0.273 Sum_probs=50.0
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
+++|..|. ..+.++|.+.++..|++|+++++|++|..+ ++++++|++.+| +++||+||..
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~~G-~i~Ad~VV~A 202 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS--GGRVTGVQTADG-VIPADIVVSC 202 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTE-EEECSEEEEC
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe--CCEEEEEEECCc-EEECCEEEEC
Confidence 45566664 378999999999999999999999999887 677778888777 7999999853
No 50
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.79 E-value=2.7e-09 Score=107.16 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
|++|||||||||++||++|..|+++|++|+|+||++.+|...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~ 43 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCC
Confidence 567999999999999999999999999999999998887643
No 51
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.77 E-value=2.3e-07 Score=98.48 Aligned_cols=52 Identities=23% Similarity=0.319 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCC-CeEEEEEeC--CCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~-g~~~gV~~~--~G~--~i~A~~VI~ 332 (486)
..+.+.|.+.++..|++|+++++|++|..+ + +++++|++. +|+ +++||.||+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~--~~g~v~GV~~~~~~G~~~~i~A~~VVl 311 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILED--ASGKVTGVLVKGEYTGYYVIKADAVVI 311 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC----CCEEEEEEEETTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEEC--CCCeEEEEEEEeCCCcEEEEEcCEEEE
Confidence 478899999999999999999999999876 5 788888765 675 589999885
No 52
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.62 E-value=1.9e-08 Score=99.01 Aligned_cols=43 Identities=14% Similarity=0.127 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh--CCCcEEEEccCCCCCCCccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~--~G~~VlvlE~~~~~GG~~~s 63 (486)
.++||+|||+|.+||+||.+|++ .|++|+|+|+++++||.+..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 35799999999999999999974 59999999999999998764
No 53
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.56 E-value=3.4e-08 Score=96.11 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=35.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
.|++|||||||+|.+||+||.+|+|+|++|+++|++. +||.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~ 43 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNR 43 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGG
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCe
Confidence 5788999999999999999999999999999999975 5554
No 54
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.54 E-value=4e-08 Score=96.53 Aligned_cols=59 Identities=8% Similarity=0.070 Sum_probs=40.1
Q ss_pred CCCCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEcc----CCCCCCCcccc
Q 011414 6 SESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSSL 64 (486)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~----~~~~GG~~~s~ 64 (486)
...+++.|.-++..+..+||+|||||++||++|..|++.|++|+|+|+ +..+||.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 6 HHHHHSSGLVPRGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp ---------------CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred cccccccCCCCCCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 344455554444455679999999999999999999999999999999 45899987653
No 55
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.53 E-value=5.3e-08 Score=94.98 Aligned_cols=41 Identities=20% Similarity=0.371 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
.+|||||||+|.+|++||..|++.|++|+++|++ .+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 4699999999999999999999999999999985 6788664
No 56
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.46 E-value=8.6e-08 Score=96.50 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
|+++||||||||++||++|+.|+++|++|+|+|+++.+|+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~ 43 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc
Confidence 457999999999999999999999999999999999887643
No 57
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.46 E-value=1.9e-06 Score=87.62 Aligned_cols=56 Identities=14% Similarity=0.175 Sum_probs=48.5
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECCC
Q 011414 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (486)
Q Consensus 278 ~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p~ 335 (486)
..++.+.+.+.++..|.++++++.|++|..+ ++++.+|++++|+++.||.||+...
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~dG~~i~aD~Vv~a~G 248 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQDGSVIPADIVIVGIG 248 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEESSSCEEECSEEEECSC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECCC
Confidence 4578888889999999999999999999875 6777889999999999999996543
No 58
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.44 E-value=1.3e-07 Score=92.06 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
..|||||||+|.+|++||..|++.|++|+++|++..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 459999999999999999999999999999999763
No 59
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.43 E-value=8.3e-08 Score=99.96 Aligned_cols=50 Identities=30% Similarity=0.390 Sum_probs=39.6
Q ss_pred CCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcccc
Q 011414 14 PYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSL 64 (486)
Q Consensus 14 ~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~ 64 (486)
.|+..+ .++||+|||||.+|++||..|++.|++|+++|+++.+||.|...
T Consensus 18 ~~~~~m-~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~ 67 (491)
T 3urh_A 18 LYFQSM-MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNV 67 (491)
T ss_dssp ---------CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH
T ss_pred cchhhc-ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc
Confidence 466644 46999999999999999999999999999999999999976643
No 60
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.43 E-value=1.5e-07 Score=94.34 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=47.9
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
+.+|.+|. .++.++|.+.++..|++++++++|++|..+ ++++ +|++.+| +++||.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~-~v~~~~g-~~~a~~vV~A 214 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD--GEAL-FIKTPSG-DVWANHVVVA 214 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS--SSSE-EEEETTE-EEEEEEEEEC
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE--CCEE-EEEcCCc-eEEcCEEEEC
Confidence 55666665 578999999999999999999999999875 5554 7877766 8999999853
No 61
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.42 E-value=1.3e-07 Score=93.36 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=41.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
|+++||+|||||++|+++|..|++.|++|+++|+++.+||.|..
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 45689999999999999999999999999999999999998764
No 62
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.41 E-value=1.1e-07 Score=98.99 Aligned_cols=52 Identities=21% Similarity=0.280 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.+++++++|++|..+ +++ +.|++.+|+++.||.||+.
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vi~A 283 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST--ENC-YNVVLTNGQTICADRVMLA 283 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC--SSS-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee--CCE-EEEEECCCcEEEcCEEEEe
Confidence 467888888889999999999999999875 444 4788899999999999853
No 63
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.41 E-value=2.9e-07 Score=89.88 Aligned_cols=56 Identities=14% Similarity=0.193 Sum_probs=46.4
Q ss_pred CCCCCCCCCCCCCC------------------CcccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCCCcc
Q 011414 7 ESELPVPPYPPIEP------------------TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 7 ~~~~~~~~~~~~~~------------------~~~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~GG~~~ 62 (486)
+..||.+.++++.. .++||+|||+|++||+||..|+++ |++|+|+|+++.+||...
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 32 KEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp STTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred hcCCCccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 45677776665432 346999999999999999999999 999999999999987543
No 64
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.40 E-value=9.9e-08 Score=96.71 Aligned_cols=43 Identities=26% Similarity=0.277 Sum_probs=39.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
|.++||||||||++|++||..|++.|.+|+|+|+++.+|+.+.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 5679999999999999999999999999999999999887553
No 65
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.39 E-value=1.9e-07 Score=94.19 Aligned_cols=58 Identities=22% Similarity=0.219 Sum_probs=45.2
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
++.|.+|. ..+.++|.+.++..|++|+++++|++|..+ ++. +.|++.+| +++|+.||.
T Consensus 142 ~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-v~v~t~~g-~i~a~~VV~ 202 (397)
T 2oln_A 142 FLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD--ADG-VSVTTDRG-TYRAGKVVL 202 (397)
T ss_dssp EEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEESSC-EEEEEEEEE
T ss_pred EEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc--CCe-EEEEECCC-EEEcCEEEE
Confidence 44565553 468889999899999999999999999876 454 45766554 799999885
No 66
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.38 E-value=2.6e-07 Score=100.32 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=49.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 2 TGNESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
+|.|.+..|+.+.+++ ....+||||||||++||+||..|++.|++|+|+|+++++||.+..
T Consensus 372 ~g~e~~~~~~~~~~~~-~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 372 MGEEWRRGWHPERIRA-KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp TTTTTTTCCCSSCCCC-CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred cCcccccccCccccCc-ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 3555555565444444 346789999999999999999999999999999999999998664
No 67
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.38 E-value=7.4e-06 Score=82.88 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=48.8
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECCC
Q 011414 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (486)
Q Consensus 278 ~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p~ 335 (486)
..++.+.+.+.++..|.++++++.|++|..+ ++++.+|++++|+++.||.||+...
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~dG~~i~aD~Vv~a~G 238 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLSDGNTLPCDLVVVGVG 238 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSEEEECCC
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECcC
Confidence 4578888989999999999999999999876 6788889999999999999996433
No 68
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.37 E-value=2e-07 Score=98.71 Aligned_cols=60 Identities=27% Similarity=0.351 Sum_probs=48.7
Q ss_pred eEeecCCc--chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCC---C--cEEEcCEEEE
Q 011414 271 LIYPIYGQ--GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS---G--QDILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG~--~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~---G--~~i~A~~VI~ 332 (486)
+.|+.+-. ..+..++.+.++..|++|+++++|++|..+ ++++++|++.+ | .+++|+.||.
T Consensus 160 ~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~~VV~ 226 (561)
T 3da1_A 160 GIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAKKVVN 226 (561)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred EEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECCEEEE
Confidence 55665432 578999999999999999999999999987 77888888753 4 4689999884
No 69
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.37 E-value=1.7e-07 Score=92.15 Aligned_cols=45 Identities=20% Similarity=0.337 Sum_probs=40.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
++..+||+|||||++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 345799999999999999999999999999999999999987753
No 70
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.36 E-value=2.3e-07 Score=89.42 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCCCCCCCc
Q 011414 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~-G~~VlvlE~~~~~GG~~ 61 (486)
.++||||||||++||++|..|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 468999999999999999999997 99999999999998743
No 71
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.35 E-value=2.1e-07 Score=92.68 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=40.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
++..+||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 455799999999999999999999999999999999999987753
No 72
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.34 E-value=1.7e-07 Score=96.87 Aligned_cols=43 Identities=23% Similarity=0.260 Sum_probs=40.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
.+|||||||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 4699999999999999999999999999999999999998764
No 73
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.34 E-value=2.4e-07 Score=97.78 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=41.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccc
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~ 65 (486)
.+..+||||||||++|+.+|..|++.|++|+|+|+++.+||.|....
T Consensus 18 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ 64 (549)
T 4ap3_A 18 GTTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR 64 (549)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC
T ss_pred CCCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC
Confidence 34578999999999999999999999999999999999999776433
No 74
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.34 E-value=2.7e-07 Score=93.52 Aligned_cols=41 Identities=20% Similarity=0.124 Sum_probs=34.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
.++.+||||||||++||++|+.|+++|++|+|+|+++.++.
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~ 60 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP 60 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 45679999999999999999999999999999999987653
No 75
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.33 E-value=4.2e-07 Score=90.56 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=35.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
..++||||||+|++|+++|+.|+++|++|+|||++...+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 3578999999999999999999999999999999875443
No 76
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.32 E-value=3.3e-07 Score=91.44 Aligned_cols=58 Identities=19% Similarity=0.293 Sum_probs=45.8
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
++.|..|. ..+.++|.+.++..|++++.+++|++|..+ ++. +.|++.+| +++||+||.
T Consensus 138 ~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~-~~v~~~~g-~~~a~~vV~ 198 (372)
T 2uzz_A 138 LFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD--DDG-VTIETADG-EYQAKKAIV 198 (372)
T ss_dssp EEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSS-EEEEESSC-EEEEEEEEE
T ss_pred EEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc--CCE-EEEEECCC-eEEcCEEEE
Confidence 44555553 478899999999999999999999999876 444 56777777 599999885
No 77
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.32 E-value=3.6e-07 Score=92.71 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=37.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCc-EEEEccCCCCCCCcc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFYGSHFS 62 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~-VlvlE~~~~~GG~~~ 62 (486)
|..+||||||||++||++|..|+++|.+ |+|+|+++.++....
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~ 45 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGV 45 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccccee
Confidence 4578999999999999999999999999 999999988765433
No 78
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.30 E-value=4.4e-07 Score=92.20 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=41.6
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~--~i~A~~VI~ 332 (486)
..+.+.|.+.++..|++++.+++|++|..+. ++..+.|++.+|+ +++||.||.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEE
Confidence 3556677777788899999999999998872 3444567778888 699999884
No 79
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.29 E-value=4.3e-07 Score=89.25 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCCCc
Q 011414 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~GG~~ 61 (486)
++||||||+|++||++|+.|++. |++|+|+|+++.+||.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 58999999999999999999997 99999999999998754
No 80
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.29 E-value=4.8e-07 Score=94.47 Aligned_cols=51 Identities=20% Similarity=0.100 Sum_probs=43.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEe---CCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~A~~VI~ 332 (486)
..+.++|.+.++..|++++.+++|++|..+ + ++++|++ .+|+ +++||.||.
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~~VV~ 204 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQARGLVN 204 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEESCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECCEEEE
Confidence 578899999999999999999999999876 4 4577877 3676 789999884
No 81
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.28 E-value=5.2e-07 Score=91.16 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=37.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
+..+||+|||||++||++|..|++.|.+|+|+|+++.++.+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 35689999999999999999999999999999999877653
No 82
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.28 E-value=3.3e-07 Score=94.68 Aligned_cols=52 Identities=13% Similarity=0.241 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEE-eCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR-LASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~-~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.+++++++|++|..+ ++..+.|+ +.+|+ +.||.||+.
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~g~-i~aD~Vv~a 263 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSAD--ADGRRVATTMKHGE-IVADQVMLA 263 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSCEEEEESSSCE-EEESEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCCEEEEEEcCCCe-EEeCEEEEe
Confidence 477888889999999999999999999875 33335788 88888 999999853
No 83
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.28 E-value=6.2e-07 Score=92.14 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC--cEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~~~GG~~~s 63 (486)
+..+||+|||||++||++|..|++.|. +|+|+|+++.+||.|..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 356899999999999999999999999 99999999999997754
No 84
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.27 E-value=5.4e-07 Score=95.02 Aligned_cols=44 Identities=20% Similarity=0.317 Sum_probs=40.9
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
.+.++||||||||++|+++|..|++.|++|+|+|+++.+||.|.
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 44579999999999999999999999999999999999999775
No 85
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.27 E-value=6.2e-07 Score=89.94 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=42.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
..+.++|.+.++..|++++++++|++|..+ ++. +.|++.+| +++||.||..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~-~~v~~~~g-~~~a~~vV~A 200 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS--PDS-VKIETANG-SYTADKLIVS 200 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSC-EEEEETTE-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec--CCe-EEEEeCCC-EEEeCEEEEe
Confidence 588899999999999999999999999876 444 46776555 7999999853
No 86
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.27 E-value=5.7e-07 Score=87.51 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=37.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
.+||+|||||++|+++|..|++.|++|+++|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999999 8988765
No 87
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.26 E-value=3.8e-07 Score=89.21 Aligned_cols=42 Identities=21% Similarity=0.324 Sum_probs=39.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
..+||+|||||++||+||..|++.|++|+++|+++.+||.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 358999999999999999999999999999999999999885
No 88
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.26 E-value=6.5e-07 Score=89.79 Aligned_cols=41 Identities=15% Similarity=0.066 Sum_probs=36.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
|..+||||||||++||++|..|++.|++|+|+|+++.+++.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~ 49 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF 49 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC
Confidence 45689999999999999999999999999999999988753
No 89
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.26 E-value=5.7e-07 Score=87.79 Aligned_cols=43 Identities=28% Similarity=0.384 Sum_probs=38.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
+.++||+|||+|++|+++|..|++.|++|+++|+ ..+||.+..
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 3468999999999999999999999999999999 568887653
No 90
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.25 E-value=6.5e-07 Score=83.50 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=33.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
|.++||||||+|++|+.+|..|++.|.+|+++|++.
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 356999999999999999999999999999999984
No 91
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.24 E-value=6.2e-07 Score=92.94 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
.+|||||||+|.+|++||..|++.|++|+++|+++..||.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46999999999999999999999999999999998655554
No 92
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.24 E-value=7.5e-07 Score=93.46 Aligned_cols=46 Identities=33% Similarity=0.437 Sum_probs=41.8
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 18 ~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
.++.++||||||||.+|++||..|++.|++|+|+|+++.+||.|..
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 84 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPH 84 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHH
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccc
Confidence 3456799999999999999999999999999999999989998753
No 93
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.24 E-value=5.4e-07 Score=92.48 Aligned_cols=60 Identities=18% Similarity=0.298 Sum_probs=48.0
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEE---------------ecCCCeEEEEEeCCCcEE--EcCEE
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLT---------------DQNSGSYKGVRLASGQDI--LSHKL 330 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~~I~~---------------~~~~g~~~gV~~~~G~~i--~A~~V 330 (486)
++++..|. ..+.++|.+.++..|++|+.+++|++|.. + ++++++|++.+| ++ +||.|
T Consensus 170 ~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~--~~~v~~V~t~~g-~i~~~Ad~V 246 (448)
T 3axb_A 170 VLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ--EARASAAVLSDG-TRVEVGEKL 246 (448)
T ss_dssp EEESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS--CEEEEEEEETTS-CEEEEEEEE
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccC--CCceEEEEeCCC-EEeecCCEE
Confidence 44455443 48899999999999999999999999987 4 566678888777 68 99999
Q ss_pred EEC
Q 011414 331 VLD 333 (486)
Q Consensus 331 I~~ 333 (486)
|..
T Consensus 247 V~A 249 (448)
T 3axb_A 247 VVA 249 (448)
T ss_dssp EEC
T ss_pred EEC
Confidence 853
No 94
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.23 E-value=9.2e-07 Score=89.30 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=35.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
+..+||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 45689999999999999999999999999999999874
No 95
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.23 E-value=7.7e-07 Score=93.31 Aligned_cols=45 Identities=29% Similarity=0.366 Sum_probs=40.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC--------CCCCCcccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP--------FYGSHFSSL 64 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~--------~~GG~~~s~ 64 (486)
+.+|||||||+|.+|++||..|++.|++|+++|+++ .+||.|...
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 82 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNV 82 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCc
Confidence 357999999999999999999999999999999965 789977543
No 96
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.23 E-value=9.8e-07 Score=90.86 Aligned_cols=53 Identities=21% Similarity=0.209 Sum_probs=43.9
Q ss_pred CCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 9 ELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 9 ~~~~~~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
.|..|. ++...+.+||+|||+|.+||+||..|++.|++|+|+|+++++||.+.
T Consensus 110 ~~~~~~-~~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 110 GWVKPR-TPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp TCCCCC-CSCSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCCC-CCcCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 455332 23334678999999999999999999999999999999999999754
No 97
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.23 E-value=6.8e-07 Score=87.48 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
+..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 35689999999999999999999999999999999 78987754
No 98
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.22 E-value=5.4e-07 Score=89.73 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=39.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCCCCCcccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSL 64 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~GG~~~s~ 64 (486)
|.++||+|||||++|+++|..|++.|+ +|+++|+++ +||.+..+
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~ 46 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHW 46 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTS
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccC
Confidence 457899999999999999999999999 999999999 99866543
No 99
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.21 E-value=6.9e-07 Score=86.67 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEE-EccCCCCCCCccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNPFYGSHFSS 63 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~Vlv-lE~~~~~GG~~~s 63 (486)
.++||+|||||++||+||..|++.|++|++ +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 788998754
No 100
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.21 E-value=1.1e-06 Score=93.32 Aligned_cols=52 Identities=13% Similarity=0.104 Sum_probs=42.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeC-CC--cEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SG--QDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~-~G--~~i~A~~VI~ 332 (486)
..+.+.|.+.++..|++++.+++|++|..+ ++..++|++. +| ++++||.||.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVESDFVID 182 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEcCEEEE
Confidence 467777888888899999999999999875 4556788876 67 5799999984
No 101
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.18 E-value=9.7e-07 Score=93.00 Aligned_cols=46 Identities=22% Similarity=0.298 Sum_probs=41.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s~~ 65 (486)
+.++||||||||++|+.+|..|++.|++|+|+|+++.+||.|....
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~ 52 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNR 52 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC
Confidence 4568999999999999999999999999999999999999875433
No 102
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.18 E-value=7.6e-07 Score=93.70 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=41.4
Q ss_pred CCcccEEEECCChhHHHHHHHHh-hCCCcEEEEccCCCCCCCccccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAAS-ASGKSVLHLDPNPFYGSHFSSLS 65 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La-~~G~~VlvlE~~~~~GG~~~s~~ 65 (486)
+.++||||||||++|+.+|..|+ +.|++|+|+|+++.+||.+....
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ 52 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNR 52 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccC
Confidence 45689999999999999999999 99999999999999999776443
No 103
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.18 E-value=5.8e-07 Score=93.23 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=38.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
+.++||||||+|.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 45799999999999999999999999999999976 78988754
No 104
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.18 E-value=9.8e-07 Score=89.45 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=40.8
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCcee---------EEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVI---------SLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG~---~~L~qal~r~~~~~Gg~i~l~~~V~---------~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
.+.+..|. ..+.++|.+.++..|++++.+++|+ +|..+ ++++ +|++.+| +++||.||.
T Consensus 161 ~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~~~g-~i~a~~VV~ 230 (405)
T 3c4n_A 161 RVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVHETR-QIRAGVIIV 230 (405)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCE-EEEEEEEEE
T ss_pred EEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEECCc-EEECCEEEE
Confidence 33455553 5788999999999999999999999 88665 4554 7776666 899999885
No 105
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.18 E-value=5e-07 Score=93.67 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=40.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
+.++||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 35699999999999999999999999999999999999997654
No 106
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.18 E-value=7.9e-07 Score=94.53 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=43.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEe---CCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~A~~VI~ 332 (486)
.++.++|.+.+...|.+|++++.|++|..++ +++++||.. .+|+ +++|+.||+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A~~VVl 200 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKARATVL 200 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEcCEEEE
Confidence 5788999999999999999999999998742 577888875 4675 589999884
No 107
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.17 E-value=1.1e-06 Score=91.89 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEe--CCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL--ASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~--~~G~--~i~A~~VI~ 332 (486)
..+.+.|.+.++..|++++++++|++|..+ ++++.+|++ .+|+ +++||.||.
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 356777888888899999999999999887 677666655 4574 799999984
No 108
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=1e-06 Score=91.06 Aligned_cols=44 Identities=18% Similarity=0.229 Sum_probs=40.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
..++||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 35699999999999999999999999999999999999998754
No 109
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.17 E-value=1.4e-06 Score=93.68 Aligned_cols=52 Identities=13% Similarity=0.116 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHc--CcEEEeCCceeEEEEecCCC---eEEEEEe---CCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVK--GCLYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~--Gg~i~l~~~V~~I~~~~~~g---~~~gV~~---~~G~--~i~A~~VI~ 332 (486)
.++.++|.+.+... |.+|+.++.|.+|..+ ++ +++||.. .+|+ .|+|+.||+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~--~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVL 227 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLD--KNTPNRIAGAVGFNLRANEVHIFKANAMVV 227 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEEC--SSSTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEe--CCccceEEEEEEEEcCCCcEEEEEeCEEEE
Confidence 46778888888887 9999999999999887 44 8888864 3564 589999884
No 110
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.17 E-value=1e-06 Score=86.71 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=38.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
++..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 446799999999999999999999999999999975 78887643
No 111
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.17 E-value=1.1e-06 Score=91.52 Aligned_cols=45 Identities=29% Similarity=0.312 Sum_probs=40.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEcc--------CCCCCCCcccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP--------NPFYGSHFSSL 64 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~--------~~~~GG~~~s~ 64 (486)
..+|||||||+|.+|++||..|++.|++|+++|+ +..+||.|...
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 56 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNV 56 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeeccc
Confidence 3569999999999999999999999999999998 66899977543
No 112
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.16 E-value=6.9e-07 Score=93.02 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
+|||||||||.+|++||..|++.|++|+++|++. +||.|.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 5999999999999999999999999999999974 999764
No 113
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.16 E-value=1.2e-06 Score=95.60 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=40.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
...+||+|||||.+||.||..|++.|++|+++|+++++||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 35689999999999999999999999999999999999998764
No 114
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.16 E-value=1.2e-06 Score=88.43 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=41.9
Q ss_pred chHHHHHHHHHHHc-CcEEEeCCceeEEEEecCCCeEE-EEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYK-GVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~-gV~~~~G~~i~A~~VI~ 332 (486)
..+.+.|.+.+... |++|+++++|++|..+ ++.++ .|++.+|++++||.||.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRD--ERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEEC--TTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc--CCceEEEEEECCCCEEECCEEEE
Confidence 46677777877777 8999999999999876 44433 68888999999999884
No 115
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.16 E-value=7e-07 Score=91.90 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeC---CCc--EEEcCEEEE
Q 011414 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (486)
Q Consensus 280 ~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---~G~--~i~A~~VI~ 332 (486)
.+.+.|.+.+...|.++++++.|++|..+ ++++++|++. +|+ +++||.||.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad~VV~ 156 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSKVVVE 156 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcCEEEE
Confidence 56677777788899999999999999887 6777667664 676 789999984
No 116
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.16 E-value=1.4e-06 Score=93.29 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
..+||||||+|++|++||..|+++|++|+|+|+.+..||.+.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~ 86 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKI 86 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSST
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCccc
Confidence 469999999999999999999999999999999999998553
No 117
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.15 E-value=1.4e-06 Score=92.01 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=37.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
.++||||||||++||++|+.|++.|.+|+|+||++.+++..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~ 65 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHP 65 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC
Confidence 36899999999999999999999999999999998876443
No 118
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.15 E-value=8.3e-07 Score=91.92 Aligned_cols=44 Identities=25% Similarity=0.335 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
+.++||||||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLN 47 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccc
Confidence 45699999999999999999999999999999999999998754
No 119
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.15 E-value=1.7e-06 Score=90.93 Aligned_cols=39 Identities=23% Similarity=0.352 Sum_probs=36.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
..++||||||||++||++|+.|++.|.+|+|+||++..+
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 356899999999999999999999999999999998765
No 120
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.15 E-value=1.5e-06 Score=92.15 Aligned_cols=60 Identities=18% Similarity=0.304 Sum_probs=47.2
Q ss_pred eEeecCCc--chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeC---CCc--EEEcCEEEE
Q 011414 271 LIYPIYGQ--GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG~--~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---~G~--~i~A~~VI~ 332 (486)
+.|+.+.. ..+..++.+.++..|++|+.+++|++|..+ ++++++|++. +|+ +++|+.||.
T Consensus 178 ~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~~VV~ 244 (571)
T 2rgh_A 178 GVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAKLVIN 244 (571)
T ss_dssp EEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBSCEEE
T ss_pred EEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcCEEEE
Confidence 45665432 468888989999999999999999999887 6777788753 344 699999884
No 121
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.15 E-value=9.7e-07 Score=94.88 Aligned_cols=52 Identities=15% Similarity=0.221 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEe---CCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~A~~VI~ 332 (486)
..|.++|.+.+...|++|+.++.|.+|..+ +|+++||.. .+|+ .++|+.||+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 214 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAKGTLI 214 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcCEEEE
Confidence 378899999998999999999999999887 788888765 4676 489999884
No 122
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.15 E-value=9.2e-07 Score=91.42 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=39.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
++||||||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 43 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLN 43 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCC
Confidence 489999999999999999999999999999999999998764
No 123
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.14 E-value=7.4e-07 Score=92.51 Aligned_cols=44 Identities=20% Similarity=0.275 Sum_probs=40.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
+.++||||||+|.+|++||..|++.|++|+++|+++.+||.+..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 47 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLN 47 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceee
Confidence 34699999999999999999999999999999999999987643
No 124
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.14 E-value=1.3e-06 Score=92.93 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=37.4
Q ss_pred cccEEEECCChhHHHHHHHHhhC------CCcEEEEccCCCCCCCc
Q 011414 22 AFDLIVIGTGLPESVISAAASAS------GKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~------G~~VlvlE~~~~~GG~~ 61 (486)
++||||||||++||+||+.|++. |.+|+||||++.+|+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 80 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT 80 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc
Confidence 58999999999999999999999 99999999999988753
No 125
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.14 E-value=1.3e-06 Score=92.06 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
..++||||||+|++||+||+.|++ |.+|+||||++..||..
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 356899999999999999999999 99999999999877653
No 126
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.14 E-value=1.9e-06 Score=89.87 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=36.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
+.++||+|||||++||++|+.|+++|.+|+|+||++.++.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 4578999999999999999999999999999999987653
No 127
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.14 E-value=9.8e-07 Score=90.87 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.+++++++|++|..+ ++. +.|++++|+++.||.||+.
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~~D~vv~A 259 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPE--AKG-ARVELEGGEVLEADRVLVA 259 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCE-EEEEECCCeEEEcCEEEEC
Confidence 578888888889999999999999999876 443 4677778999999999853
No 128
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.14 E-value=9.5e-07 Score=86.63 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=39.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEcc----CCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~----~~~~GG~~~s 63 (486)
+..+||+|||+|++|+++|..|++.|++|+++|+ ....||.+..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 4578999999999999999999999999999999 6778887543
No 129
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.13 E-value=9.6e-07 Score=91.18 Aligned_cols=42 Identities=26% Similarity=0.491 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
+++||||||||++|++||..|++.|++|+++|++ .+||.+..
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~ 43 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLN 43 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccc
Confidence 4689999999999999999999999999999998 78887643
No 130
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.12 E-value=1.3e-06 Score=90.25 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
+.++||||||||.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~ 44 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVN 44 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccC
Confidence 35689999999999999999999999999999998 78987653
No 131
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.11 E-value=1.7e-06 Score=89.89 Aligned_cols=53 Identities=8% Similarity=0.154 Sum_probs=40.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCc-----EEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-----DILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~-----~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.++++++.|++|..+. ++. +.|++.+|+ ++.||.||+.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~-~~v~~~~~~~~~~~~~~~D~vi~a 284 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQD-DGK-LLVKYKNVETGEESEDVYDTVLWA 284 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECT-TSC-EEEEEEETTTCCEEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCc-EEEEEecCCCCceeEEEcCEEEEC
Confidence 4678888888899999999999999998652 333 356665554 7899999854
No 132
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.11 E-value=2.1e-06 Score=90.91 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=33.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
.++||||||||++||++|+.|+++|++|+|||+++.++
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 46899999999999999999999999999999998765
No 133
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.11 E-value=2.2e-06 Score=89.33 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=37.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
...+||+|||||++||++|..|++.|++|+|+|+++.+|+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 35689999999999999999999999999999999988754
No 134
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.11 E-value=1.3e-06 Score=90.23 Aligned_cols=51 Identities=14% Similarity=0.102 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCc-EEEcCEEEEC
Q 011414 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVLD 333 (486)
Q Consensus 280 ~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~-~i~A~~VI~~ 333 (486)
++.+.+.+.++..|.++++++.|++|..+ ++. +.|++.+|+ ++.||.||+.
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~G~~~i~~D~vv~a 259 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERD--AQG-TTLVAQDGTRLEGFDSVIWA 259 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEE--TTE-EEEEETTCCEEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCe-EEEEEeCCcEEEEcCEEEEC
Confidence 67788888889999999999999999865 333 578888999 8999999853
No 135
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.11 E-value=1.2e-06 Score=85.33 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=37.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
|..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 45689999999999999999999999999999974 7888654
No 136
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.11 E-value=2.1e-06 Score=83.27 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=36.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCCCCCccc
Q 011414 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~GG~~~s 63 (486)
|||+|||+|++|+++|..|++.|+ +|+++|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 78887653
No 137
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.09 E-value=1.3e-06 Score=90.69 Aligned_cols=54 Identities=4% Similarity=-0.031 Sum_probs=43.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCC-cEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG-QDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G-~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.++++++.|++|..+. +++.+.|++++| +++.||.||+.
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~~v~~~~G~~~i~~D~vv~a 280 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNV-ETDKLKIHMNDSKSIDDVDELIWT 280 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcC-CCcEEEEEECCCcEEEEcCEEEEC
Confidence 3677888888899999999999999997641 332457888899 78999999853
No 138
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.08 E-value=1.3e-06 Score=89.74 Aligned_cols=53 Identities=8% Similarity=0.079 Sum_probs=43.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.++++++.|++|..+ ++..+.|++.+|+++.||.||+.
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~i~~D~vv~a 260 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKN--TDGSLTLELEDGRSETVDCLIWA 260 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCcEEEEEECCCcEEEcCEEEEC
Confidence 367888888889999999999999999765 32224677889999999999853
No 139
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.07 E-value=1.4e-06 Score=86.32 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCC------CcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G------~~VlvlE~~~~~GG 59 (486)
.||||||||++||++|+.|+++| ++|+|||++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 49999999999999999999998 99999999885544
No 140
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.07 E-value=1.8e-06 Score=92.07 Aligned_cols=52 Identities=19% Similarity=0.320 Sum_probs=44.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEe---CCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~A~~VI~ 332 (486)
.+|.++|.+.+...|.+|+.++.|.+|..+ +|+++||.. .+|+ .++|+.||+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 211 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAKNTVI 211 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478899999988899999999999999887 788888875 4676 589999884
No 141
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.07 E-value=2.5e-06 Score=90.17 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=41.5
Q ss_pred chHHHHHHHHHHH-cCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+.++|.+.++. .|.++ ++..|+.|..+ ++++++|++.+|++++|+.||+
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e--~g~V~GV~t~dG~~i~AdaVVL 174 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVK--NNQVVGVRTNLGVEYKTKAVVV 174 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEES--SSBEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEec--CCEEEEEEECCCcEEEeCEEEE
Confidence 3567777777777 47888 68899999876 6788899999999999999885
No 142
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.07 E-value=2.9e-06 Score=88.48 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
.++||+|||||++||++|+.|+++|.+|+|+|+++.++.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 49 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG 49 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 568999999999999999999999999999999987653
No 143
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.06 E-value=2.1e-06 Score=86.48 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=33.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
++||||||||++||++|+.|++.|++|+|+|+++.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999864
No 144
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.05 E-value=2e-06 Score=89.53 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.++++++.|++|..+ ++..+.|++.+|+++.||.||+.
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a 283 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKN--ADGTRHVVFESGAEADYDVVMLA 283 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEECCCcEEEcCEEEEc
Confidence 367888888899999999999999999765 33235788889989999999853
No 145
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.05 E-value=1.7e-06 Score=89.41 Aligned_cols=43 Identities=30% Similarity=0.377 Sum_probs=38.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
|+++||||||+|.+|++||..|++.|++|+++|+++ +||.|..
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~ 46 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLN 46 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCC
Confidence 346999999999999999999999999999999998 8987643
No 146
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.05 E-value=2.5e-06 Score=90.47 Aligned_cols=46 Identities=20% Similarity=0.299 Sum_probs=35.8
Q ss_pred CCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC-CCCC
Q 011414 14 PYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGS 59 (486)
Q Consensus 14 ~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~-~~GG 59 (486)
...+....+|||||||||++|+.||..|++.|.+|+++|++. .+|+
T Consensus 13 ~~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 13 GLVPRGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp -------CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CccccccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 344555567999999999999999999999999999999985 4554
No 147
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.03 E-value=3.3e-06 Score=85.04 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
.+|+|||||++||++|..|+++|++|+|+||++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999997644
No 148
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.02 E-value=2.9e-06 Score=81.45 Aligned_cols=59 Identities=19% Similarity=0.147 Sum_probs=43.4
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECCCC
Q 011414 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (486)
Q Consensus 271 ~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p~~ 336 (486)
+.+...+...+.+.+.+.++..|.+++. ++|++|.. ++ +|++.+|+++.+|.||+.+.+
T Consensus 166 v~~v~~~~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~---~~---~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 166 TTFFTNGIVEPDADQHALLAARGVRVET-TRIREIAG---HA---DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EEEECTTTCCCCHHHHHHHHHTTCEEEC-SCEEEEET---TE---EEEETTSCEEEESEEEECCEE
T ss_pred EEEEECCCCCCCHHHHHHHHHCCcEEEc-ceeeeeec---CC---eEEeCCCCEEEEEEEEEccCc
Confidence 4444444446667777888899999985 89998853 22 677899999999999965443
No 149
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.02 E-value=3.4e-06 Score=87.06 Aligned_cols=42 Identities=12% Similarity=0.279 Sum_probs=39.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCc---EEEEccCCCCCCCcccc
Q 011414 23 FDLIVIGTGLPESVISAAASA---SGKS---VLHLDPNPFYGSHFSSL 64 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~---~G~~---VlvlE~~~~~GG~~~s~ 64 (486)
+||+|||||.+||+||..|++ .|.+ |+++|+++.+||.|...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~ 50 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYT 50 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecC
Confidence 699999999999999999999 9999 99999999999988753
No 150
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.02 E-value=2.8e-06 Score=88.46 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=39.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
...+||||||+|++|++||..|++. ++|+|+|+++++||.+..
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 3468999999999999999999999 999999999999998764
No 151
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.01 E-value=2e-06 Score=89.53 Aligned_cols=53 Identities=9% Similarity=0.156 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.++++++.|++|..+ ++..+.|++++|+++.||.||+.
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a 287 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLN--TDGSKHVTFESGKTLDVDVVMMA 287 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCceEEEEECCCcEEEcCEEEEC
Confidence 367888888899999999999999999765 33335788889999999999954
No 152
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.00 E-value=3.1e-06 Score=89.80 Aligned_cols=38 Identities=34% Similarity=0.497 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC-CCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYG 58 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~-~~G 58 (486)
.+|||||||||++|+.||..|++.|.+|+|+|++. .+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 56999999999999999999999999999999984 444
No 153
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.00 E-value=4.5e-06 Score=87.83 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+.+.|.+.+...|++++.+ .|++|..++ ++.+++|++.+|++++||.||.
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~ 216 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNN-RGYISNLLTKEGRTLEADLFID 216 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEETTSCEECCSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcC-CCcEEEEEECCCcEEEeCEEEE
Confidence 578888888888899999999 899998752 5666788888898999999984
No 154
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.00 E-value=8.5e-06 Score=87.53 Aligned_cols=38 Identities=13% Similarity=0.181 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCcEEEEccCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYG 58 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-~G~~VlvlE~~~~~G 58 (486)
.++||||||||++||++|+.|++ .|.+|+|+||++..+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999999 999999999998764
No 155
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=2.2e-06 Score=88.34 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
.++||||||||.+|++||..|++.|++|+++|+ +.+||.|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~ 45 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLN 45 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCC
Confidence 468999999999999999999999999999999 789998764
No 156
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=2.6e-06 Score=87.72 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=37.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
++||||||||.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~ 43 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLN 43 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcC
Confidence 589999999999999999999999999999998 88987643
No 157
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.99 E-value=5.8e-06 Score=82.00 Aligned_cols=40 Identities=20% Similarity=0.121 Sum_probs=36.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
+||||||+|++|+.||..|+++|++|+++|++...+.-.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 6999999999999999999999999999999886655544
No 158
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.99 E-value=3.7e-06 Score=84.37 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~ 57 (486)
.||||||||++||++|..|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999999876
No 159
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.98 E-value=6.1e-06 Score=89.22 Aligned_cols=43 Identities=26% Similarity=0.387 Sum_probs=39.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
...+||||||||.+|+.||..|++.|++|+++|+++++||.+.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 3468999999999999999999999999999999999999864
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.97 E-value=4.7e-06 Score=80.76 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=35.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
+|||+|||+|++|+++|..|++.|++|+++|+ ++||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 5788765
No 161
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.97 E-value=2.6e-06 Score=90.76 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=43.5
Q ss_pred chHHHHHHHHHHHcC-cEEEeCCceeEEEEecCCCeEEEEEe---CCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~A~~VI~ 332 (486)
..|.++|.+.+...| .+|++++.|.+|..+ +++++||.. .+|+ +++|+.||+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 191 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRANAVVM 191 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478899988888889 999999999999887 678878753 5676 689999884
No 162
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.97 E-value=4.8e-06 Score=87.80 Aligned_cols=38 Identities=29% Similarity=0.434 Sum_probs=34.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
..+||+||||+|.+|+++|.+|+++|++|+|||+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 45799999999999999999999999999999998753
No 163
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.96 E-value=2.4e-06 Score=89.09 Aligned_cols=50 Identities=10% Similarity=0.123 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 280 ~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
++.+.+.+.++..|.+++++++|++|..+ +++ +.|++.+|+++.||.||+
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vv~ 273 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT--GAG-VLVTMTDGRTVEGSHALM 273 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC--SSS-EEEEETTSCEEEESEEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCE-EEEEECCCcEEEcCEEEE
Confidence 67888888899999999999999999865 444 467778899999999985
No 164
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.96 E-value=3.7e-06 Score=85.86 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 799999999999999999999999999999986
No 165
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=3.6e-06 Score=87.73 Aligned_cols=54 Identities=7% Similarity=0.003 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcE-EEcCEEEECC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD-ILSHKLVLDP 334 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~-i~A~~VI~~p 334 (486)
.++.+.+.+.++..|.++++++.|++|..+. ++. +.|++++|++ +.||.||+..
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~~v~~~~g~~~~~~D~vi~a~ 271 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVS-DKN-LSIHLSDGRIYEHFDHVIYCV 271 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTC-EEEEETTSCEEEEESEEEECC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-Cce-EEEEECCCcEEEECCEEEECC
Confidence 4778888888999999999999999997641 333 4677889988 9999999643
No 166
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.95 E-value=3.9e-06 Score=88.09 Aligned_cols=51 Identities=8% Similarity=-0.002 Sum_probs=44.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
.++++.+.+..+..|.++++++.|+++... ++. +.|.+.+++++.+|.|++
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~--~~~-~~v~~~~~~~~~~D~vLv 313 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKM--DDK-ILVEFSDKTSELYDTVLY 313 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEE--TTE-EEEEETTSCEEEESEEEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEec--CCe-EEEEEcCCCeEEEEEEEE
Confidence 578899999999999999999999999876 454 467788999999999885
No 167
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.94 E-value=5.4e-06 Score=87.69 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CcEEEEccCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPF 56 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G-~~VlvlE~~~~ 56 (486)
..+||+||||+|.+||++|.+|++.| .+|+||||...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 45799999999999999999999998 79999999765
No 168
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.94 E-value=4.6e-06 Score=87.39 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCcEEEEccCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPF 56 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-~G~~VlvlE~~~~ 56 (486)
.+||+||||+|.+|+++|.+|++ .|++|||||+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 37999999999999999999998 6899999999644
No 169
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.94 E-value=6.4e-06 Score=85.18 Aligned_cols=51 Identities=22% Similarity=0.160 Sum_probs=40.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeC-CCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~-~G~~i~A~~VI~ 332 (486)
.++.++|.+.++..|.+++.+++| +|..+ ++++++|.+. ++.++.||.||+
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~--~~~v~Gv~v~~~~g~~~a~~VVl 170 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK--DGKVTGFVTEKRGLVEDVDKLVL 170 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE--TTEEEEEEETTTEEECCCSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe--CCEEEEEEEEeCCCeEEeeeEEE
Confidence 478888988888889999999999 99877 6788787653 334578999884
No 170
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.93 E-value=4.9e-06 Score=85.66 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-----CcEEEEccCCCCCCCc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASG-----KSVLHLDPNPFYGSHF 61 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G-----~~VlvlE~~~~~GG~~ 61 (486)
..+||||||+|++||++|..|++.| .+|+++|+++.+|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 4689999999999999999999999 9999999999998544
No 171
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.91 E-value=7.4e-06 Score=72.79 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
+||+|||+|++|+.+|..|++.|++|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999987
No 172
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.89 E-value=8e-06 Score=86.36 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=34.4
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCC
Q 011414 18 IEPTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (486)
Q Consensus 18 ~~~~~~DViIIGaGl~GL~aA~~La~~-G~~VlvlE~~~ 55 (486)
+...+||+||||||.+||++|.+|++. |++|+|||+..
T Consensus 15 ~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 15 VSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred cCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 445689999999999999999999975 89999999977
No 173
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.88 E-value=6.8e-06 Score=88.32 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHHc-Cc-EEEeCCceeEEEEecCCC---eEEEEEe---CCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVK-GC-LYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~-Gg-~i~l~~~V~~I~~~~~~g---~~~gV~~---~~G~--~i~A~~VI~ 332 (486)
..+...|.+.++.. |. +|+.++.|.+|..+ ++ +++||.. .+|+ .++|+.||+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~--~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 212 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKD--NNDPNAVAGAVGFSVREPKFYVFKAKAVIL 212 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC--TTCTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc--CCccceeEEEEEEEecCCcEEEEEcCEEEE
Confidence 35677777777777 99 99999999999886 55 8888764 5666 589999884
No 174
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.86 E-value=1e-05 Score=85.31 Aligned_cols=52 Identities=25% Similarity=0.205 Sum_probs=44.4
Q ss_pred chHHHHHHHHHHHc-CcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+.+.|.+.++.. |++++++ .|++|..++ ++.+++|++.+|++++||.||.
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~-~g~~~~v~~~~G~~i~ad~vI~ 246 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDA-NGNIESVRTATGRVFDADLFVD 246 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECT-TSCEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEECCEEEE
Confidence 46888898988888 9999999 999998752 5667789888998999999994
No 175
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.85 E-value=7.7e-06 Score=91.86 Aligned_cols=42 Identities=29% Similarity=0.377 Sum_probs=40.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
..+||||||+|.+|++||..|++.|++|+|+|+++++||.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 468999999999999999999999999999999999999887
No 176
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.84 E-value=8e-06 Score=85.68 Aligned_cols=52 Identities=12% Similarity=0.193 Sum_probs=42.7
Q ss_pred chHHHHHHHHHHH-cCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+.+.|.+.++. .|++++.+ .|++|..+. ++.+++|++.+|++++||.||.
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~ 227 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQ-HGDIEKLITKQNGEISGQLFID 227 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecC-CCcEEEEEECCCCEEEcCEEEE
Confidence 4678888888888 89999999 599998752 5666788888888899999994
No 177
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.84 E-value=7e-06 Score=86.29 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
.+||+||||+|.+|+++|.+|++ |++|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 56999999999999999999999 999999999876543
No 178
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.83 E-value=1.2e-05 Score=84.23 Aligned_cols=41 Identities=15% Similarity=0.356 Sum_probs=37.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
+..+||+|||||.+|++||.+|++.|++|+++|+ ++||.+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 3578999999999999999999999999999996 5788765
No 179
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.80 E-value=8.9e-06 Score=83.71 Aligned_cols=43 Identities=14% Similarity=0.121 Sum_probs=38.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-C------CCcEEEEccCCCCCCCcc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASA-S------GKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~-~------G~~VlvlE~~~~~GG~~~ 62 (486)
|..+||+|||+|.+|+.||..|++ . |++|+++|+++.+||.+.
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 346899999999999999999999 7 999999999999998764
No 180
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.78 E-value=1.3e-05 Score=86.52 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=37.7
Q ss_pred CcccEEEECCChhHHHHHHHHhh-----CCCcEEEEccCCCC--CCCcccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASA-----SGKSVLHLDPNPFY--GSHFSSL 64 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-----~G~~VlvlE~~~~~--GG~~~s~ 64 (486)
.++||+|||||++||++|+.|++ .|.+|+|+||++.. .|+...+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l 57 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGL 57 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEE
Confidence 46899999999999999999999 99999999998764 4554444
No 181
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.77 E-value=1.4e-05 Score=81.92 Aligned_cols=42 Identities=10% Similarity=0.097 Sum_probs=35.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCCCc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~GG~~ 61 (486)
|+.+||||||+|++|++||..|++. |++|+++|++++.|+..
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~ 44 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP 44 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC
Confidence 3458999999999999999999998 88999999999887543
No 182
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.77 E-value=9.5e-06 Score=84.70 Aligned_cols=52 Identities=21% Similarity=0.230 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+.+.|.+.+...|++++.+ .|++|..++ ++.+++|++.+|++++||.||.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~~~~~~v~~~~g~~~~ad~vV~ 224 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDE-RGWISGVHTKQHGEISGDLFVD 224 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEEcCEEEE
Confidence 478888888888899999999 999998752 5667789888998999999994
No 183
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.76 E-value=1.4e-05 Score=82.83 Aligned_cols=51 Identities=8% Similarity=0.090 Sum_probs=40.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +++++.||.||+.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~D~vi~a 277 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG---NERVEAVET-DKGTYKADLVLVS 277 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSBEEEEEE-TTEEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc---CCcEEEEEE-CCCEEEcCEEEEC
Confidence 46778888888999999999999999964 345556765 4568999999853
No 184
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.76 E-value=1.3e-05 Score=82.91 Aligned_cols=54 Identities=11% Similarity=0.132 Sum_probs=44.9
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECC
Q 011414 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (486)
Q Consensus 278 ~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p 334 (486)
..++.+.+.+.++..|.+++++++|++|..+ ++++ .|++.+|+++.||.||+..
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g~~i~aD~Vv~a~ 254 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE--NGKV-ARVITDKRTLDADLVILAA 254 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBE-EEEEESSCEEECSEEEECS
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc--CCeE-EEEEeCCCEEEcCEEEECC
Confidence 4578888989999999999999999999764 5554 4777899999999999643
No 185
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.75 E-value=1.4e-05 Score=85.25 Aligned_cols=35 Identities=31% Similarity=0.334 Sum_probs=32.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
...|||+|||+|.+|++||..|++.|++|+++|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45699999999999999999999999999999983
No 186
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.74 E-value=1.8e-05 Score=89.50 Aligned_cols=41 Identities=10% Similarity=0.200 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCCCCCc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHF 61 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~GG~~ 61 (486)
+.+||+|||+|.+|++||..|++.|+ +|+|+|+++++||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 47899999999999999999999999 799999999999975
No 187
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.72 E-value=1.6e-05 Score=81.94 Aligned_cols=42 Identities=10% Similarity=-0.034 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CcEEEEccCCCCCCCcc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~GG~~~ 62 (486)
..+||+|||+|++|+.+|..|++.| ++|+++|+++++||.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4579999999999999999999999 99999999999998764
No 188
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.71 E-value=2.1e-05 Score=83.67 Aligned_cols=50 Identities=24% Similarity=0.195 Sum_probs=41.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.+++++++|++|..+ ++ +|++.+|+++.||.||+.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~~g~~i~~D~Vi~a 277 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN--GA---VVRLKSGSVIQTDMLILA 277 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG--GT---EEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC--CC---EEEECCCCEEEcCEEEEc
Confidence 477888888899999999999999999653 33 467789999999999964
No 189
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.70 E-value=2.3e-05 Score=81.68 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=35.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
+.+||+||||+|.+|+++|.+|++.|++|+|+|+....+
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 457999999999999999999999999999999998765
No 190
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.66 E-value=2.2e-05 Score=82.77 Aligned_cols=38 Identities=29% Similarity=0.426 Sum_probs=34.7
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCcEEEEccCCCCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~-~G~~VlvlE~~~~~GG 59 (486)
+||+||||+|.+|+++|.+|++ .|++|+|||+....++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~ 40 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDEN 40 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccC
Confidence 5999999999999999999999 7999999999877643
No 191
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.63 E-value=2.9e-05 Score=79.78 Aligned_cols=51 Identities=6% Similarity=0.134 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.+++++++|++|..+ ++++ .|++.+| ++.||.||+.
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLETSEQ-EISCDSGIFA 239 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEESSC-EEEESEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEECCC-EEEeCEEEEC
Confidence 577888888899999999999999999865 5555 7877666 8999999853
No 192
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.61 E-value=2.9e-05 Score=79.18 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=36.3
Q ss_pred ccEEEECCChhHHHHHHHHhh--CCCcEEEEccCCCCCCCc
Q 011414 23 FDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~--~G~~VlvlE~~~~~GG~~ 61 (486)
.||||||||++|+++|..|++ .|++|+|+|+++++|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 599999999999999999999 899999999999988754
No 193
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.60 E-value=5.2e-05 Score=79.05 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
+.+||+||||+|.+|+++|.+|++.|++|+|||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 35799999999999999999999999999999998654
No 194
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.60 E-value=3.5e-05 Score=79.12 Aligned_cols=53 Identities=19% Similarity=0.205 Sum_probs=43.9
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 278 ~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
..++.+.+.+.++..|.+++++++|++|..+ ++++..|.+ +|+++.||.||+.
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~-~g~~i~~D~vv~a 242 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL-DGKEIKSDIAILC 242 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET-TSCEEEESEEEEC
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe-CCCEEECCEEEEC
Confidence 3578888889999999999999999999865 566656764 8889999999854
No 195
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.59 E-value=4.1e-05 Score=81.31 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-CCCcEEEEccCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFY 57 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~-~G~~VlvlE~~~~~ 57 (486)
+.+||+||||+|.+|+++|.+|++ .|++|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 467999999999999999999999 79999999998654
No 196
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.59 E-value=5.3e-05 Score=77.27 Aligned_cols=54 Identities=9% Similarity=0.025 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEE--ecCCCeEEEEEeCCCcEEEcCEEEECC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLT--DQNSGSYKGVRLASGQDILSHKLVLDP 334 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~--~~~~g~~~gV~~~~G~~i~A~~VI~~p 334 (486)
.++.+.+.+.++..|.++++++.|++|.. + ++++.+|++.+|+++.||.||+..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~~~v~~v~~~~G~~i~~D~Vv~a~ 246 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTD--QQKVTAVLCEDGTRLPADLVIAGI 246 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTT--TCCEEEEEETTSCEEECSEEEECC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccC--CCcEEEEEeCCCCEEEcCEEEECC
Confidence 46778888888999999999999999976 3 566678888999999999999643
No 197
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.57 E-value=5.3e-05 Score=79.70 Aligned_cols=40 Identities=28% Similarity=0.382 Sum_probs=36.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGS 59 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~-G~~VlvlE~~~~~GG 59 (486)
..+||+||||+|.+|+++|.+|+++ |++|+|||+.....+
T Consensus 11 ~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 11 DREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred cCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 3579999999999999999999998 999999999877643
No 198
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.54 E-value=5.4e-05 Score=75.87 Aligned_cols=53 Identities=17% Similarity=0.078 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p 334 (486)
.++.+.+.+.++..|.++++++.|++|..+ ++. +.|++++|+++.||.||+..
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~g~~i~~d~vv~a~ 239 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA--GEG-LEAHLSDGEVIPCDLVVSAV 239 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec--CCE-EEEEECCCCEEECCEEEECc
Confidence 467888888888999999999999999875 443 57888899999999999643
No 199
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.52 E-value=3.2e-05 Score=78.19 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=41.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECCCC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p~~ 336 (486)
.++.+.+.+.++..|.++++++.|++|. .+ +|++++|+++.||.||+.+..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~----~~---~v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIR----EH---EIVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEC----SS---EEEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEEC----CC---eEEECCCCEEeeeEEEECCCC
Confidence 4678888888999999999999999984 22 366789999999999865443
No 200
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.52 E-value=5.4e-05 Score=78.65 Aligned_cols=53 Identities=17% Similarity=0.157 Sum_probs=44.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p 334 (486)
.++.+.+.+.++..|.++++++.|++|..+ +++ +.|++++|+++.||.||+..
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~--~~~-~~v~l~dG~~i~aD~Vv~a~ 278 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS--SGK-LLIKLKDGRKVETDHIVAAV 278 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec--CCe-EEEEECCCCEEECCEEEECC
Confidence 357788888889999999999999999765 454 47888999999999999643
No 201
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.50 E-value=5.4e-05 Score=77.56 Aligned_cols=51 Identities=12% Similarity=0.065 Sum_probs=40.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.++++++.|++|..+ ++++.|.+ +|+++.||.||+.
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~v~~v~~-~~~~i~~d~vi~a 241 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD---GRVQKVVT-DKNAYDADLVVVA 241 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS---SBCCEEEE-SSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc---CcEEEEEE-CCCEEECCEEEEC
Confidence 467888888888999999999999998643 44445665 6778999999854
No 202
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.50 E-value=5.2e-05 Score=78.72 Aligned_cols=51 Identities=10% Similarity=0.155 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +|+++.||.||+.
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~v~~v~~-~g~~i~~D~Vi~a 286 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG---NGKVEKIIT-DKNEYDVDMVILA 286 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC---SSSCCEEEE-SSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc---CCcEEEEEE-CCcEEECCEEEEC
Confidence 46778888888999999999999999964 344445665 7889999999854
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.48 E-value=7.2e-05 Score=75.69 Aligned_cols=49 Identities=22% Similarity=0.243 Sum_probs=41.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p 334 (486)
.++.+.+.+.++..|.++++++.|++|. + + +|++++|+++.||.||+..
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~~g~~i~~D~vi~a~ 235 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G----VVLLDDGTRIAADMVVVGI 235 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T----EEEETTSCEEECSEEEECS
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEECCCCEEEcCEEEECc
Confidence 4677888888899999999999999996 3 3 5677899999999999643
No 204
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.42 E-value=7.6e-05 Score=76.23 Aligned_cols=36 Identities=17% Similarity=0.382 Sum_probs=33.8
Q ss_pred cccEEEECCChhHHHHHHHHhh---CCCcEEEEccCCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~---~G~~VlvlE~~~~~ 57 (486)
..||||||||++|+++|..|++ .|++|+|+|+++++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4699999999999999999999 89999999999865
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.40 E-value=9.9e-05 Score=73.57 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=38.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.++++++.|++|. .+ +|++++|+ +.||.||+.
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~----~~---~v~~~~g~-i~~D~vi~a 229 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN----EE---GVLTNSGF-IEGKVKICA 229 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC----SS---EEEETTEE-EECSCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE----ee---EEEECCCE-EEcCEEEEC
Confidence 3677888888899999999999999985 22 46678887 999999854
No 206
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.33 E-value=0.00015 Score=73.36 Aligned_cols=53 Identities=11% Similarity=0.131 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEECC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~p 334 (486)
.++.+.+.+.++..|.++++++.|++|..+ +++.+|++++|+++.||.||+..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~dg~~i~aD~Vv~a~ 237 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMASDGRSFVADSALICV 237 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEETTSCEEECSEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEECCCCEEEcCEEEEee
Confidence 467788888889999999999999999753 35568889999999999999643
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.32 E-value=0.00012 Score=77.17 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~G 58 (486)
.||+|||||++|++||..|++. |++|+++|+++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4899999999999999999998 89999999999986
No 208
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.25 E-value=8.1e-05 Score=77.48 Aligned_cols=44 Identities=16% Similarity=0.135 Sum_probs=32.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
.+.+||||||+|.+||++|++|.++|...+++|+.+..|+.+..
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~ 80 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKIC 80 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEE
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCccee
Confidence 45689999999999999999999988776666666666665543
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.05 E-value=0.00033 Score=72.83 Aligned_cols=36 Identities=11% Similarity=0.277 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.+..|||||||.+|+.+|..|++.|++|+++|++++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 456799999999999999999999999999999985
No 210
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.04 E-value=0.00048 Score=69.08 Aligned_cols=39 Identities=10% Similarity=0.243 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
+...|+|||||++|+.||..|++.|.+|+++|++++++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 456899999999999999999888999999999998773
No 211
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.00 E-value=0.00037 Score=70.01 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=32.5
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CcEEEEccCCCCCCC
Q 011414 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSH 60 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~GG~ 60 (486)
.|||||+|.+|++||.+|++.| .+|+|+|+++++..+
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~ 42 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC 42 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc
Confidence 6999999999999999999887 489999999875444
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.91 E-value=0.00054 Score=69.91 Aligned_cols=47 Identities=11% Similarity=0.139 Sum_probs=39.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
.++.+.+.+..+..|.++++++.|+++. .+ .|++++|+++.||.||+
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~----~~---~v~~~~g~~~~~D~vl~ 234 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAIN----GN---EITFKSGKVEHYDMIIE 234 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEE----TT---EEEETTSCEEECSEEEE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEec----CC---eeeecCCeEEeeeeEEE
Confidence 5777888888999999999999999873 23 36678999999999985
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.80 E-value=0.00069 Score=68.94 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=31.2
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CcEEEEccCCCC
Q 011414 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNPFY 57 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~ 57 (486)
.|||||||.+|++||..|++.| .+|+++|++++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 6999999999999999999876 789999999864
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.70 E-value=0.01 Score=60.35 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=35.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
..+|+|||+|..|+.+|..|++.|.+|+++|+++++..+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 468999999999999999999999999999999987653
No 215
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.66 E-value=0.015 Score=49.02 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
-.|+|||.|--|...|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 369999999999999999999999999999974
No 216
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.63 E-value=0.009 Score=59.68 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999999988665
No 217
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.52 E-value=0.013 Score=50.31 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...|+|||+|.-|+.+|..|.+.|++|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3479999999999999999999999999999874
No 218
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.52 E-value=0.012 Score=48.92 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|+|||+|..|...|..|++.|++|.++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 219
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.27 E-value=0.014 Score=56.04 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~ 182 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA 182 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc
Confidence 3799999999999999999999999999999987643
No 220
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.23 E-value=0.021 Score=48.77 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...++|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4569999999999999999999999999999963
No 221
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.03 E-value=0.017 Score=59.11 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998865
No 222
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.00 E-value=0.022 Score=47.79 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|+|+|+|.-|...|..|++.|++|.++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 369999999999999999999999999999863
No 223
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.98 E-value=0.022 Score=56.69 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=35.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
.+++|||+|..|+-+|..|++.|.+|+++|+++++....
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 184 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL 184 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc
Confidence 479999999999999999999999999999999876653
No 224
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=94.92 E-value=0.022 Score=58.27 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999988755
No 225
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.85 E-value=0.022 Score=58.05 Aligned_cols=37 Identities=27% Similarity=0.198 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 226
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.83 E-value=0.022 Score=58.00 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999988654
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.80 E-value=0.022 Score=56.40 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 4799999999999999999999999999999998765
No 228
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.80 E-value=0.026 Score=57.89 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999988763
No 229
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.76 E-value=0.027 Score=49.54 Aligned_cols=36 Identities=19% Similarity=0.280 Sum_probs=32.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~-G~~VlvlE~~~ 55 (486)
...-.|+|||.|..|...|..|.+. |++|+++|++.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 3345799999999999999999999 99999999974
No 230
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.48 E-value=0.039 Score=56.14 Aligned_cols=53 Identities=13% Similarity=0.171 Sum_probs=40.4
Q ss_pred CCCCCCCCCCC----CCCCCC-CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 4 NESESELPVPP----YPPIEP-TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 4 ~~~~~~~~~~~----~~~~~~-~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
+....+|-.|+ +.+..+ ....|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 31 ~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 31 HSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp TCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 33455687773 222222 224699999999999999999999999999999876
No 231
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.45 E-value=0.035 Score=55.76 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=35.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 57999999999999999999999999999999987654
No 232
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.42 E-value=0.031 Score=53.47 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
..|+|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 47999999999999999999999999999987653
No 233
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.42 E-value=0.032 Score=56.78 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4799999999999999999999999999999988654
No 234
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.38 E-value=0.039 Score=44.23 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CcEEEEccC
Q 011414 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPN 54 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G-~~VlvlE~~ 54 (486)
..|+|+|+|..|..++..|.+.| ++|.+++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 46999999999999999999999 999999986
No 235
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=94.26 E-value=0.066 Score=52.72 Aligned_cols=45 Identities=18% Similarity=0.243 Sum_probs=37.1
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 15 YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 15 ~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-++-.+.++||||||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 10 ~~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 10 RIRAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp ----CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred HhhccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 334455679999999999999999999999999999999976554
No 236
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.09 E-value=0.05 Score=51.71 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3469999999999999999999999999999875
No 237
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.07 E-value=0.042 Score=56.15 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~ 203 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc
Confidence 4799999999999999999999999999999988653
No 238
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.00 E-value=0.03 Score=57.54 Aligned_cols=38 Identities=24% Similarity=0.320 Sum_probs=35.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
..+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 35799999999999999999999999999999988765
No 239
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.96 E-value=0.046 Score=52.87 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
-.|.|||+|.-|...|..++.+|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 240
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.93 E-value=0.055 Score=51.87 Aligned_cols=33 Identities=33% Similarity=0.477 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 359999999999999999999999999999874
No 241
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.81 E-value=0.054 Score=55.43 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4799999999999999999999999999999998765
No 242
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.79 E-value=0.056 Score=52.10 Aligned_cols=48 Identities=10% Similarity=0.009 Sum_probs=33.4
Q ss_pred CCCCCCCCC-CCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 9 ELPVPPYPP-IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 9 ~~~~~~~~~-~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
+|+.+.+.+ .......|.|||.|.-|...|..|+++|++|.+++++..
T Consensus 7 ~~~~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 7 HHHHSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp -----------CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccccccccCcccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 344443222 233446799999999999999999999999999999764
No 243
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.77 E-value=0.042 Score=53.07 Aligned_cols=49 Identities=20% Similarity=0.123 Sum_probs=31.0
Q ss_pred CCCCCCC-CCCCCCC-CcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 7 ESELPVP-PYPPIEP-TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 7 ~~~~~~~-~~~~~~~-~~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
|+-|+-+ +|+.++. ....|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 7 HSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp ------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred cccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 5567766 4766543 34579999999999999999999999 999999973
No 244
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.76 E-value=0.05 Score=56.02 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 4699999999999999999999999999999988755
No 245
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=93.69 E-value=0.055 Score=55.25 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999988754
No 246
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=93.65 E-value=0.061 Score=55.43 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=35.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 57999999999999999999999999999999987654
No 247
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.65 E-value=0.059 Score=49.99 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=31.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
......|.|||+|.-|...|..|+++|++|++.+++.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4445679999999999999999999999999999874
No 248
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.64 E-value=0.053 Score=45.14 Aligned_cols=31 Identities=32% Similarity=0.377 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
.|+|+|+|..|...|..|.+.|++|.++|++
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999986
No 249
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=93.63 E-value=0.046 Score=56.13 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 4799999999999999999999999999999988754
No 250
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=93.62 E-value=0.09 Score=55.16 Aligned_cols=44 Identities=27% Similarity=0.357 Sum_probs=39.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCcc
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (486)
.+.+|||||||||++|+.+|+.|+++|++|+|+|+++..||...
T Consensus 15 ~~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~ 58 (561)
T 3da1_A 15 SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSS 58 (561)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGG
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCccc
Confidence 45679999999999999999999999999999999987777553
No 251
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=93.60 E-value=0.12 Score=52.32 Aligned_cols=42 Identities=26% Similarity=0.252 Sum_probs=37.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CcEEEEccCCCCCCCc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHF 61 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G-~~VlvlE~~~~~GG~~ 61 (486)
|.++||||||||++|+++|+.|+++| ++|+|||+++.+|+.+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g~ 63 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGD 63 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCSG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCCc
Confidence 46799999999999999999999999 9999999966665433
No 252
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.58 E-value=0.06 Score=54.01 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 4799999999999999999999999999999988754
No 253
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.57 E-value=0.06 Score=53.06 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=32.2
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 17 PIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 17 ~~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
++++....|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 17 ~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 456667789999999999999999999999999999874
No 254
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.47 E-value=0.056 Score=52.92 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
..|+|||+|.+|+-+|..|++.|.+|+++++++.+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 379999999999999999999999999999988754
No 255
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=93.46 E-value=0.068 Score=54.26 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=34.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
+|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 7999999999999999999999999999999987654
No 256
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.42 E-value=0.066 Score=51.04 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC
Confidence 579999999999999999999999999999998773
No 257
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.39 E-value=0.074 Score=55.51 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
...|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999876
No 258
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.32 E-value=0.048 Score=55.74 Aligned_cols=37 Identities=19% Similarity=0.154 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 4799999999999999999999999999999988754
No 259
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.29 E-value=0.15 Score=49.86 Aligned_cols=42 Identities=31% Similarity=0.350 Sum_probs=37.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
++||||||||++|+++|+.|+++|++|+|+|+++..+|...+
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~ 43 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSH 43 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCC
Confidence 489999999999999999999999999999999887665443
No 260
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.28 E-value=0.06 Score=48.85 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|+|||+|--|...|..|.+.|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999863
No 261
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=93.21 E-value=0.071 Score=54.68 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc
Confidence 4799999999999999999999999999999988653
No 262
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.19 E-value=0.2 Score=49.60 Aligned_cols=38 Identities=24% Similarity=0.502 Sum_probs=35.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
.++||||||||++|+++|+.|+++|++|+||||++..+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 45899999999999999999999999999999998765
No 263
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.17 E-value=0.083 Score=51.42 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
...|.|||+|..|...|..|++.|+ +|.++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3579999999999999999999998 999999975
No 264
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.11 E-value=0.075 Score=54.87 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 4799999999999999999999999999999988754
No 265
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=93.06 E-value=0.076 Score=50.59 Aligned_cols=35 Identities=20% Similarity=0.120 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 36999999999999999999999999999999887
No 266
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=93.05 E-value=0.082 Score=55.23 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
....|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 3457999999999999999999999999999998763
No 267
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.03 E-value=0.077 Score=54.44 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...|.|||+|.-|+..|..|+++|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 268
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.02 E-value=0.092 Score=52.48 Aligned_cols=39 Identities=26% Similarity=0.285 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~ 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc
Confidence 469999999999999999999999999999999876553
No 269
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.02 E-value=0.089 Score=51.76 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=32.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
+....|.|||+|.-|.+.|..|+++|++|.++++++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 344689999999999999999999999999999864
No 270
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.01 E-value=0.1 Score=52.76 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=34.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
.++|||+|..|+-.|..|++.|.+|+++|+.+++....
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~ 186 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM 186 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc
Confidence 79999999999999999999999999999999875443
No 271
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.99 E-value=0.082 Score=51.76 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
....|.|||+|..|...|..|+++|++|.+++++.
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34579999999999999999999999999999863
No 272
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.89 E-value=0.1 Score=47.08 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
...|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 34699999999999999999999999999998865
No 273
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.88 E-value=0.087 Score=53.75 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 4699999999999999999999999999999987654
No 274
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=92.88 E-value=0.081 Score=54.04 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
-.|+|||+|.+|+-+|..|++.|.+|+++++++.+-
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 469999999999999999999999999999987653
No 275
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.82 E-value=0.09 Score=53.68 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999988764
No 276
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=92.81 E-value=0.087 Score=50.76 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~ 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC
Confidence 479999999999999999999999999999998763
No 277
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=92.80 E-value=0.2 Score=52.67 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=36.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
.++||||||||++|+++|+.|+++|++|+|||+++..+|.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~Gt 70 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGT 70 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 4699999999999999999999999999999999866653
No 278
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.78 E-value=0.085 Score=55.17 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
....|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 3457999999999999999999999999999998763
No 279
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=92.76 E-value=0.1 Score=52.32 Aligned_cols=39 Identities=23% Similarity=0.203 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~ 191 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV 191 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh
Confidence 469999999999999999999999999999999876543
No 280
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.74 E-value=0.095 Score=50.74 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
..|.|||+|.-|...|..|+++|++|.++|++..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4699999999999999999999999999999753
No 281
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.73 E-value=0.097 Score=50.16 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=31.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
....|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34579999999999999999999999999999875
No 282
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.72 E-value=0.089 Score=53.35 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=32.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCc-EEEEccCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFY 57 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~-VlvlE~~~~~ 57 (486)
-+|+|||+|.+|+-.|..|++.|.+ |+++++++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998765
No 283
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.72 E-value=0.1 Score=53.06 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
...|.|||.|.+|+++|..|++.|++|.+.|+++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 35799999999999999999999999999999763
No 284
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.70 E-value=0.091 Score=50.24 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc
Confidence 479999999999999999999999999999988763
No 285
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.69 E-value=0.11 Score=52.40 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
....+.|||.|..||..|+.||+.|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 44579999999999999999999999999999874
No 286
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=92.69 E-value=0.094 Score=50.39 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 369999999999999999999999999999998764
No 287
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.68 E-value=0.099 Score=50.92 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
...|.|||+|.-|...|..|+++|++|.+++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 357999999999999999999999999999985
No 288
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=92.66 E-value=0.094 Score=50.75 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
..|+|||+|..|+-.|..|++.|.+|+++++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~ 191 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC
Confidence 479999999999999999999999999999998763
No 289
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.61 E-value=0.1 Score=50.44 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|++|.++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 369999999999999999999999999999975
No 290
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.60 E-value=0.099 Score=50.62 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=31.9
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCC----CcEEEEccCC
Q 011414 15 YPPIEPTAFDLIVIGTGLPESVISAAASASG----KSVLHLDPNP 55 (486)
Q Consensus 15 ~~~~~~~~~DViIIGaGl~GL~aA~~La~~G----~~VlvlE~~~ 55 (486)
-+++++....|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 15 ~~~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 15 TENLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -------CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CchhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 4667777778999999999999999999999 8999999875
No 291
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.53 E-value=0.14 Score=52.36 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 292
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.49 E-value=0.1 Score=50.17 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|.+.|..|+++|++|.++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 369999999999999999999999999999975
No 293
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=92.47 E-value=0.3 Score=44.57 Aligned_cols=51 Identities=18% Similarity=0.064 Sum_probs=41.5
Q ss_pred chHHHHHHHHHHHc-CcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+.+.|.+.++.. |.+++ +++|++|..+ ++++++|++.+|++++||.||.
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~--~~~v~~v~~~~g~~i~a~~VV~ 119 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLE--GNRVVGVRTWEGPPARGEKVVL 119 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE--TTEEEEEEETTSCCEECSEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe--CCEEEEEEECCCCEEECCEEEE
Confidence 36677777877776 77777 6899999887 6777788888998999999985
No 294
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.47 E-value=0.11 Score=49.03 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998763
No 295
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.45 E-value=0.092 Score=50.63 Aligned_cols=37 Identities=8% Similarity=0.211 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~ 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc
Confidence 4799999999999999999999999999999987644
No 296
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=92.36 E-value=0.17 Score=51.57 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=35.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
.-.|+|||+|..|+-+|..|++.|.+|+++++.+++....
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~ 211 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL 211 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC
Confidence 3579999999999999999999999999999999876543
No 297
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.31 E-value=0.17 Score=48.36 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=30.8
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 24 DViIIG-aGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.|.||| +|.-|...|..|+++|++|.+++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 699999 999999999999999999999998764
No 298
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=92.28 E-value=0.11 Score=54.38 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=33.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 799999999999999999999999999999987654
No 299
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.18 E-value=0.11 Score=53.26 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
-.|+|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc
Confidence 46999999999999999999999999999999987653
No 300
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.18 E-value=0.12 Score=49.37 Aligned_cols=35 Identities=17% Similarity=0.045 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
...|.|||.|.-|...|..|+++|++|.+++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45799999999999999999999999999999864
No 301
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.13 E-value=0.25 Score=48.58 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=35.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
++||||||||++|+++|+.|+++|++|+|+|+++..|
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 5899999999999999999999999999999998766
No 302
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.07 E-value=0.13 Score=52.08 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
...+.|||+|.-|+..|..|+++|++|+++|++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35789999999999999999999999999999864
No 303
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.05 E-value=0.14 Score=52.37 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC-CC-cEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASAS-GK-SVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~-G~-~VlvlE~~~~ 56 (486)
..|.|||+|.-|+..|..|+++ |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999876
No 304
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.05 E-value=0.13 Score=49.22 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 369999999999999999999999999999864
No 305
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.03 E-value=0.12 Score=49.56 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
-.|+|||+|..|+-.|..|++.|.+|+++++.+++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~ 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC
Confidence 369999999999999999999999999999988763
No 306
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=92.01 E-value=0.23 Score=49.00 Aligned_cols=52 Identities=13% Similarity=0.311 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEe---CCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~~i~A~~VI~ 332 (486)
..+.+.|.+.++..|++++++++|++|..+ ++++.+|++ .++++++||.||.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRAKMVIA 156 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEECCeEEEEEcCEEEE
Confidence 467788888888899999999999999887 677777876 3566899999884
No 307
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.99 E-value=0.12 Score=52.45 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 369999999999999999999999999999875
No 308
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.98 E-value=0.13 Score=52.58 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-.|..|++.|.+|+++++.+++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 224 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc
Confidence 4799999999999999999999999999999888653
No 309
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.93 E-value=0.15 Score=51.86 Aligned_cols=38 Identities=16% Similarity=-0.001 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
..++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 185 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK 185 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc
Confidence 46999999999999999999999999999999887543
No 310
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.83 E-value=0.1 Score=53.09 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~ 57 (486)
...|+|||+|.+|+-+|..|++. |.+|+++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45799999999999999999999 9999999998654
No 311
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.74 E-value=0.16 Score=46.27 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=31.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
.+...|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 34567999999999999999999999999999974
No 312
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.72 E-value=0.14 Score=49.19 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
..|+|||+|..|+-+|..|++.|.+|.++++.+.+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 4699999999999999999999999999999987644
No 313
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=91.69 E-value=0.41 Score=48.22 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=34.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--cEEEEccCCCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYG 58 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~~~G 58 (486)
.+||||||+|++|++||..|++.|+ +|+++|+++..+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP 42 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC
Confidence 5899999999999999999999998 799999998754
No 314
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.60 E-value=0.14 Score=51.83 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999864
No 315
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.50 E-value=0.16 Score=52.72 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc
Confidence 57999999999999999999999999999999876543
No 316
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.47 E-value=0.15 Score=49.88 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 3699999999999999999999999999999987644
No 317
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.46 E-value=0.11 Score=52.77 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
..|.|||.|.+|+++|..|++.|++|.+.|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 36999999999999999999999999999998765
No 318
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.31 E-value=0.21 Score=47.97 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
...|.|||+|.-|...|..|++.|++|.+++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998753
No 319
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=91.31 E-value=0.44 Score=49.05 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~---~G~~VlvlE~~~~ 56 (486)
+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 699999999999999999999 9999999999864
No 320
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.28 E-value=0.18 Score=51.76 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3469999999999999999999999999999875
No 321
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.25 E-value=0.18 Score=48.10 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
+..|.|||+|.-|...|..|+ +|++|+++|++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 467999999999999999999 999999999875
No 322
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.24 E-value=0.095 Score=48.10 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
...|.|||+|.-|.+.|..|+++|++|..+++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 357999999999999999999999999999985
No 323
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.22 E-value=0.46 Score=49.51 Aligned_cols=37 Identities=8% Similarity=0.146 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhh---CCCcEEEEccCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~---~G~~VlvlE~~~~ 56 (486)
+..+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 357899999999999999999999 9999999999764
No 324
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.13 E-value=0.2 Score=52.75 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (486)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 46999999999999999999999999999999887654
No 325
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=91.09 E-value=0.16 Score=53.63 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
-.|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999999987
No 326
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.98 E-value=0.19 Score=50.70 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
..|.|||+|.-|+..|..|++ |++|+++|++..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 479999999999999999998 999999998753
No 327
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.97 E-value=0.22 Score=48.02 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=33.0
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCC-cEEEEccC
Q 011414 18 IEPTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (486)
Q Consensus 18 ~~~~~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~ 54 (486)
+.|....|.|||+|..|...|..|++.|+ +|.++|.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34455679999999999999999999999 99999997
No 328
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.96 E-value=0.11 Score=48.92 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
....|+|||+|-.|+..|..|.+.|.+|+|++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 44679999999999999999999999999999865
No 329
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=90.96 E-value=0.23 Score=50.70 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 4799999999999999999999999999999988754
No 330
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=90.95 E-value=0.42 Score=48.39 Aligned_cols=37 Identities=27% Similarity=0.541 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
.++||||||||++||++|..|+++|++|+|+|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 4689999999999999999999999999999998764
No 331
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.92 E-value=0.14 Score=48.77 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|--|.+.|..|+++|++|.+++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 369999999999999999999999999999874
No 332
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=90.91 E-value=0.15 Score=52.92 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (486)
..|+|||+|.+|+-+|..|++.|.+|+++++.+++.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999998874
No 333
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.86 E-value=0.19 Score=45.75 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=30.9
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 21 TAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 21 ~~~DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
....|+|.|| |.-|..++..|.++|++|.++.|+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3456999998 9999999999999999999999864
No 334
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.86 E-value=0.2 Score=49.87 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
-.|+|||+|..|+.+|..|...|.+|+++|++..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999999999999999999863
No 335
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.81 E-value=0.22 Score=45.07 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999863
No 336
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.72 E-value=0.24 Score=46.62 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
..|+|.|+|.-|...+..|.++|++|.++.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999998754
No 337
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.71 E-value=0.21 Score=48.47 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
..|.|||+|.-|...|..|+++|++|.+++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 47999999999999999999999999999986
No 338
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.67 E-value=0.21 Score=47.33 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999999754
No 339
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.65 E-value=0.21 Score=48.22 Aligned_cols=33 Identities=15% Similarity=0.413 Sum_probs=29.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...|.|||+|.-|...|..|+++|++|.++ ++.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 457999999999999999999999999999 654
No 340
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.65 E-value=0.13 Score=46.78 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=31.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEE-EccCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNP 55 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~Vlv-lE~~~ 55 (486)
....|.|||+|.-|...|..|+++|++|.+ ++++.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 345799999999999999999999999999 88764
No 341
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.63 E-value=0.22 Score=48.09 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
..|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999975
No 342
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=90.63 E-value=0.21 Score=47.57 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
..|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 4699999999999999999999999999999988755
No 343
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.62 E-value=0.24 Score=47.82 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999874
No 344
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.59 E-value=0.13 Score=52.42 Aligned_cols=34 Identities=15% Similarity=0.365 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.+.|||+|+|-.|...|..|+..|++|+|+|++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999974
No 345
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=90.55 E-value=0.43 Score=47.51 Aligned_cols=38 Identities=26% Similarity=0.393 Sum_probs=34.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
+.++||||||||++||++|+.|+++|++|+|+|+++..
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP 40 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 34689999999999999999999999999999999754
No 346
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.46 E-value=0.23 Score=47.84 Aligned_cols=33 Identities=30% Similarity=0.348 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (486)
..|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999974
No 347
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=90.46 E-value=0.37 Score=47.66 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
.++||||||||++||++|..|+++|++|+|+|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 4689999999999999999999999999999998765
No 348
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.32 E-value=0.22 Score=50.18 Aligned_cols=33 Identities=30% Similarity=0.301 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
..-|||.|.-|+..|..|+++|++|+++|++..
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 578999999999999999999999999999854
No 349
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=90.22 E-value=0.62 Score=48.98 Aligned_cols=53 Identities=19% Similarity=0.279 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeC------CC---------cEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA------SG---------QDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~------~G---------~~i~A~~VI~ 332 (486)
..+.+.|.+.++..|++|+++++|++|..++ ++++++|++. +| .+++||.||.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~-~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~ 211 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHE-DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIF 211 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECT-TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEE
Confidence 4788889898889999999999999998862 4677788876 33 6899999984
No 350
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.22 E-value=0.3 Score=46.82 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 351
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=90.21 E-value=0.6 Score=47.47 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~G 58 (486)
...||||||||++||+||..|++. |++|+|+|+++++|
T Consensus 2 ~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 2 SLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 357999999999999999999999 99999999999875
No 352
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=90.21 E-value=0.25 Score=50.27 Aligned_cols=36 Identities=22% Similarity=0.129 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFY 57 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~ 57 (486)
..+|+|||+|..|+-+|..+.+.|. +|++++++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3579999999999999999999997 59999998765
No 353
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.18 E-value=0.24 Score=50.76 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=31.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
|++.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 456789999999999999999999999999999863
No 354
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=90.10 E-value=0.25 Score=46.83 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
..|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 46999999999999999999999999999999877
No 355
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.06 E-value=0.3 Score=47.24 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
..|.|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999874
No 356
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.98 E-value=0.33 Score=46.74 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|+ +|.++|++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 479999999999999999999999 999999976
No 357
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.96 E-value=0.14 Score=42.99 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|..|...|..|++.|.+|.+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 469999999999999999999999999999863
No 358
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.93 E-value=0.27 Score=44.04 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=29.5
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIG-aGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|.||| +|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 489999 99999999999999999999999863
No 359
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=89.91 E-value=0.31 Score=47.48 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999885
No 360
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=89.91 E-value=0.27 Score=46.99 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
..|+|||+|..|+-+|..|++.|.+|+++++.+++.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~ 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc
Confidence 4699999999999999999999999999999988743
No 361
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=89.86 E-value=0.65 Score=47.58 Aligned_cols=43 Identities=28% Similarity=0.333 Sum_probs=38.8
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCcEEEEc--------cCCCCCCCccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-~G~~VlvlE--------~~~~~GG~~~s 63 (486)
.+|||||||||.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 46999999999999999999999 999999999 46789997654
No 362
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=89.83 E-value=0.7 Score=47.44 Aligned_cols=43 Identities=33% Similarity=0.364 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCcEEEEc--------cCCCCCCCccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-~G~~VlvlE--------~~~~~GG~~~s 63 (486)
.++||||||||.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 47999999999999999999999 999999999 46789997654
No 363
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=89.83 E-value=0.3 Score=50.04 Aligned_cols=34 Identities=9% Similarity=-0.023 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
-.++|||+|..|+-.|..|++.|.+|+++++...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP 219 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc
Confidence 4699999999999999999999999999998753
No 364
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=89.81 E-value=0.3 Score=49.99 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999975
No 365
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=89.76 E-value=0.84 Score=46.11 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~GG 59 (486)
+||||||+|.+|++||..|++. |++|+++|+++.+|.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 5999999999999999999998 999999999987653
No 366
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.73 E-value=0.21 Score=49.27 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
-.|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999885
No 367
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.71 E-value=0.22 Score=47.18 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.|.|||.|.-|...|..|+++|++|.+++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999999854
No 368
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.68 E-value=0.28 Score=49.16 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
..|||||.|-.|...|..|.+.|++|+++|++..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4699999999999999999999999999999853
No 369
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=89.67 E-value=0.25 Score=49.44 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999874
No 370
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=89.61 E-value=0.86 Score=46.73 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~G 58 (486)
+..+||||||+|++|++||..|+++ |.+|+++|+++++|
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4679999999999999999999887 89999999998765
No 371
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=89.57 E-value=0.74 Score=47.04 Aligned_cols=42 Identities=31% Similarity=0.296 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
.+|||||||||++||+||..|++.|++|+++|+ +.+||.|..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 479999999999999999999999999999999 789997654
No 372
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=89.55 E-value=0.21 Score=49.07 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 373
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.48 E-value=0.3 Score=46.49 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999874
No 374
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.47 E-value=0.27 Score=50.22 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~ 55 (486)
..|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999999864
No 375
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.41 E-value=0.34 Score=46.94 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
..|.|||+|..|...|..|++.|+ +|.++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999975
No 376
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.41 E-value=0.22 Score=47.74 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC-----C-CcEEEEcc
Q 011414 23 FDLIVIGTGLPESVISAAASAS-----G-KSVLHLDP 53 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~-----G-~~VlvlE~ 53 (486)
..|.|||+|.-|...|..|+++ | ++|.++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 377
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.38 E-value=0.31 Score=46.65 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (486)
.|.|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 378
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.38 E-value=0.23 Score=47.94 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEcc
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~ 53 (486)
.|.|||+|.-|...|..|+++|++|.++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999998
No 379
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.36 E-value=0.32 Score=46.67 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|--|.+.|..|+ +|.+|.+++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 46999999999999999999 999999999875
No 380
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=89.28 E-value=0.19 Score=50.15 Aligned_cols=40 Identities=25% Similarity=0.391 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSH 60 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~GG~ 60 (486)
.++||||||||++|+++|+.|+++ |++|+|||+++..+|.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 459999999999999999999999 9999999998765554
No 381
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.25 E-value=0.2 Score=48.97 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCC-------CcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G-------~~VlvlE~~~~ 56 (486)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 357999999999999999999999 99999999876
No 382
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=89.25 E-value=0.44 Score=49.28 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
-.++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~ 243 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSI 243 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc
Confidence 369999999999999999999999999999853
No 383
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.10 E-value=0.33 Score=49.76 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~ 55 (486)
..|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 79999999863
No 384
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=89.09 E-value=0.76 Score=47.21 Aligned_cols=40 Identities=38% Similarity=0.464 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
|+++||||||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 1 M~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 1 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 3569999999999999999999999999999999875443
No 385
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=89.09 E-value=0.91 Score=39.17 Aligned_cols=50 Identities=20% Similarity=0.074 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEEC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~~ 333 (486)
.++.+.+.+.++..|.+++++ +|++|..+ ++. +.|++.+| ++.||.||..
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~--~~~-~~v~~~~g-~i~ad~vI~A 105 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM--GGV-FEVETEEG-VEKAERLLLC 105 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC--SSS-EEEECSSC-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc--CCE-EEEEECCC-EEEECEEEEC
Confidence 477888888889999999999 99999875 333 56777788 8999999964
No 386
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.08 E-value=0.34 Score=46.88 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHH-HHHHHhhCCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESV-ISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~-aA~~La~~G~~VlvlE~~~~ 56 (486)
..|.|||.|-+|++ +|..|.+.|++|.+.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 36999999999996 78889999999999999865
No 387
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.05 E-value=0.33 Score=45.08 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCC----CcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASG----KSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G----~~VlvlE~~~~ 56 (486)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 357999999999999999999999 79999999865
No 388
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=88.94 E-value=0.33 Score=45.49 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
..|+|||+|..|+-+|..|++.| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 47999999999999999999999 9999998776
No 389
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=88.88 E-value=0.89 Score=45.27 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=46.3
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecC--CCeEEEEEeCCCcEEEcCEEEE
Q 011414 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQN--SGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 271 ~~~p~gG~~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~--~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..||..-..++.++|.+.++..|.+|+++++|++|..+++ +++ +.|++.+| +++||+||+
T Consensus 101 ~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 101 QLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp EEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 3567555568999999999999999999999999976410 133 57777666 799999884
No 390
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=88.79 E-value=0.78 Score=47.57 Aligned_cols=38 Identities=5% Similarity=0.161 Sum_probs=34.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhh---CCCcEEEEccCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~---~G~~VlvlE~~~~~ 57 (486)
+..+||||||||++|+++|+.|++ .|.+|+|||+.+..
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 356899999999999999999999 99999999997643
No 391
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.79 E-value=0.37 Score=45.75 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 392
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=88.72 E-value=0.43 Score=49.71 Aligned_cols=37 Identities=14% Similarity=0.012 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.++|||+|..|+=.|..+++-|.+|+++++...+-+
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~ 260 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG 260 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc
Confidence 4699999999999999999999999999998766533
No 393
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=88.70 E-value=0.94 Score=48.30 Aligned_cols=42 Identities=31% Similarity=0.318 Sum_probs=37.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
+.++||||||+|++||+||+.|+++|.+|+||||....||..
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s 44 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHS 44 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGG
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcc
Confidence 346899999999999999999999999999999998776544
No 394
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=88.67 E-value=0.17 Score=41.94 Aligned_cols=53 Identities=4% Similarity=-0.066 Sum_probs=40.8
Q ss_pred cEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhhccCCCcceEEEEEEEecCCCC
Q 011414 323 QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (486)
Q Consensus 323 ~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~~~ 377 (486)
++++||+||++ |...+.. +.++|+||..+....+...++...|.++.+++||=
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW 57 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWW 57 (130)
T ss_dssp EEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGG
T ss_pred eEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCC
Confidence 46899999976 4333344 35788899887777677778999999999999964
No 395
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=88.63 E-value=0.85 Score=46.94 Aligned_cols=38 Identities=39% Similarity=0.621 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
+.++||||||||++||++|+.|+++|++|+|+|+++..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 45699999999999999999999999999999999754
No 396
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=88.59 E-value=0.77 Score=46.59 Aligned_cols=42 Identities=31% Similarity=0.317 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCccc
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (486)
.+|||||||||.+|++||..|++.|++|+++|+ +.+||.|..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 45 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVI 45 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccc
Confidence 469999999999999999999999999999999 789997653
No 397
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=88.47 E-value=1 Score=46.18 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=38.0
Q ss_pred cccEEEECCChhHHHHHHHHhhC---CCcEEEEccCCCCCCCccc
Q 011414 22 AFDLIVIGTGLPESVISAAASAS---GKSVLHLDPNPFYGSHFSS 63 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~---G~~VlvlE~~~~~GG~~~s 63 (486)
++||||||||.+|++||..|++. |++|+++|+++ +||.+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~ 45 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVL 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccC
Confidence 48999999999999999999999 99999999999 9997654
No 398
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.44 E-value=0.51 Score=44.31 Aligned_cols=32 Identities=13% Similarity=0.149 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
..|+|+|+|-.|..+|..|++.|.+|.++.|+
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999886
No 399
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=88.42 E-value=0.36 Score=49.20 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHh--------------------hCCC-cEEEEccCCCC
Q 011414 23 FDLIVIGTGLPESVISAAAS--------------------ASGK-SVLHLDPNPFY 57 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La--------------------~~G~-~VlvlE~~~~~ 57 (486)
-.|+|||+|..|+-+|..|+ +.|. +|.++++++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 57999999999999999999 6787 79999997654
No 400
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=88.37 E-value=0.41 Score=45.93 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhC--CCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~ 55 (486)
.|.|||+|..|...|..|++. |.+|.++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999985 89999999985
No 401
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=88.33 E-value=0.44 Score=48.72 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
-.++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 469999999999999999999999999999854
No 402
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.32 E-value=0.44 Score=48.74 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4679999999999999999999999999999863
No 403
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=88.26 E-value=0.91 Score=48.03 Aligned_cols=42 Identities=21% Similarity=0.160 Sum_probs=37.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
+.++||||||+|++||+||+.|+++|.+|+||||....||..
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s 57 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHT 57 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 356899999999999999999999999999999988766643
No 404
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.19 E-value=0.44 Score=44.73 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48999999999999999999999999999874
No 405
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.17 E-value=0.36 Score=46.53 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G-~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 36999999999999999999999 9999999985
No 406
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=88.13 E-value=1 Score=47.42 Aligned_cols=42 Identities=29% Similarity=0.244 Sum_probs=37.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
+.++||||||+|++||+||+.|+++|.+|+||||+...||..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s 46 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHT 46 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc
Confidence 356899999999999999999999999999999998876643
No 407
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.08 E-value=0.39 Score=47.96 Aligned_cols=33 Identities=30% Similarity=0.457 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
-.|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999874
No 408
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=88.01 E-value=1.1 Score=46.19 Aligned_cols=37 Identities=11% Similarity=0.229 Sum_probs=33.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh------------CCCcEEEEccCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASA------------SGKSVLHLDPNPFY 57 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~------------~G~~VlvlE~~~~~ 57 (486)
..+||||||||++|+++|+.|++ .|.+|+|+|+.+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~ 54 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVA 54 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCC
Confidence 46899999999999999999999 99999999997643
No 409
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=87.98 E-value=0.43 Score=46.73 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.|+|+|+|..|..+|..+.+.|++|.++|.+..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 489999999999999999999999999998753
No 410
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.95 E-value=0.5 Score=45.69 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=32.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
|....|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 345679999999999999999999999 999999976
No 411
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=87.94 E-value=1 Score=47.56 Aligned_cols=38 Identities=29% Similarity=0.364 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC-CCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYG 58 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~-~~G 58 (486)
.+|||||||||++|+.||..|++.|.+|+++|++. .+|
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG 64 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIG 64 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccC
Confidence 46999999999999999999999999999999984 444
No 412
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=87.93 E-value=0.46 Score=44.94 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999999999999875
No 413
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.74 E-value=0.4 Score=44.52 Aligned_cols=32 Identities=9% Similarity=0.240 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhCC-CcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G-~~VlvlE~~~ 55 (486)
.|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4899999999999999999999 9999999864
No 414
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=87.72 E-value=0.55 Score=44.30 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC---cEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGK---SVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~---~VlvlE~~~ 55 (486)
...|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3569999999999999999999999 999999975
No 415
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.66 E-value=0.24 Score=45.27 Aligned_cols=32 Identities=6% Similarity=-0.030 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..++|+|+|..|...|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 469999999999999999999999 99999864
No 416
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.58 E-value=0.42 Score=44.34 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
..|+|||+|-.|+.+|..|+++|. +++++|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 479999999999999999999997 899999863
No 417
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.57 E-value=0.41 Score=51.68 Aligned_cols=33 Identities=30% Similarity=0.287 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999999999999999975
No 418
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=87.36 E-value=0.55 Score=43.30 Aligned_cols=45 Identities=11% Similarity=0.131 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 10 LPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 10 ~~~~~~~~~~~~~~DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
||.|.+...+.. -|+|.|+ |--|...|..|++.|++|.+++++..
T Consensus 12 ~~~~~~~~~m~k--~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 12 SGLVPRGSHMSK--NILVLGGSGALGAEVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp ----------CC--EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred ccccccccccCC--EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 444445554432 4788886 56799999999999999999998764
No 419
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=87.29 E-value=0.73 Score=48.51 Aligned_cols=40 Identities=23% Similarity=0.226 Sum_probs=36.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
|..+||||||||++|+++|+.|+++|++|+|+|+++..++
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~ 60 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY 60 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC
Confidence 5679999999999999999999999999999999976544
No 420
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=87.28 E-value=0.95 Score=42.76 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=35.3
Q ss_pred CCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 10 LPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 10 ~~~~~~~~~~~~~~DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
++.|..++..+...-|+|.|| |.-|...|..|+++|++|.++.++.
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 14 LQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp CCSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 455555555555556888875 6789999999999999999998863
No 421
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.25 E-value=0.51 Score=46.78 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
-.|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999875
No 422
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.21 E-value=0.61 Score=45.00 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=32.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
|....|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 334579999999999999999999998 999999976
No 423
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=87.21 E-value=0.52 Score=44.68 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 424
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=87.18 E-value=0.54 Score=48.18 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 425
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.07 E-value=0.54 Score=48.33 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 426
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.04 E-value=0.61 Score=41.01 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.1
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|+|+|+ |.-|...+..|.++|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999998 9999999999999999999999864
No 427
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.03 E-value=0.52 Score=44.49 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.5
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+ |.-|...|..|+++|++|.+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36999999 9999999999999999999999864
No 428
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.00 E-value=0.51 Score=46.50 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|+|+|+|-.|+.+|..|+..|.+|+++|++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 429
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.97 E-value=0.52 Score=46.31 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
-.|+|+|+|-.|+.++..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 430
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=86.97 E-value=0.68 Score=44.48 Aligned_cols=42 Identities=14% Similarity=0.140 Sum_probs=34.0
Q ss_pred CCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 14 PYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 14 ~~~~~~~~~~DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
+.++-.....-|+|.|| |.-|...+..|+++|++|.++.++.
T Consensus 12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 44454555567999997 9999999999999999999999864
No 431
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.91 E-value=0.46 Score=45.82 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (486)
.|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999874
No 432
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.79 E-value=0.57 Score=44.01 Aligned_cols=32 Identities=22% Similarity=0.480 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (486)
.|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 433
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.77 E-value=0.6 Score=41.60 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=29.2
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|+|+|| |.-|...+..|.++|++|.++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4899994 9999999999999999999999874
No 434
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=86.70 E-value=0.33 Score=54.28 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+|||+|..|+-+|..|++.|.+|+|+|+++++..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 4699999999999999999999999999999988754
No 435
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.69 E-value=0.51 Score=44.14 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|+|.|+|.-|...+..|.++|++|.++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 369999999999999999999999999998864
No 436
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.66 E-value=0.88 Score=43.12 Aligned_cols=36 Identities=19% Similarity=0.074 Sum_probs=30.0
Q ss_pred CCcccEEEECCC---hhHHHHHHHHhhCCCcEEEEccCC
Q 011414 20 PTAFDLIVIGTG---LPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 20 ~~~~DViIIGaG---l~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
+...-|+|.|++ --|...|..|+++|.+|.+++++.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 344568999985 678999999999999999999874
No 437
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=86.65 E-value=0.46 Score=51.42 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=32.8
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 011414 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGS 59 (486)
Q Consensus 23 ~DViIIG--aGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (486)
-.|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 3799998 99999999999999999999999988 543
No 438
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=86.63 E-value=0.56 Score=47.96 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999863
No 439
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.58 E-value=0.63 Score=44.82 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (486)
...|.|||+|..|..+|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 899999874
No 440
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=86.57 E-value=0.6 Score=45.15 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--cEEEEccC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPN 54 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~ 54 (486)
...|.|||+|..|.+.|..|+..|. +|.++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4579999999999999999999997 89999985
No 441
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=86.43 E-value=1.4 Score=41.41 Aligned_cols=52 Identities=8% Similarity=0.052 Sum_probs=40.6
Q ss_pred chHHHHHHHHHHH-cCcEEEeCCceeEEEEecCCCeEEEEEeC---------CC-----cEEEcCEEEE
Q 011414 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLA---------SG-----QDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---------~G-----~~i~A~~VI~ 332 (486)
.++.+.+.+.+.. .|.++++++.|++|..+ ++++.+|++. +| .+++||.||.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~ 185 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVS 185 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEECCEEEE
Confidence 5677777777765 69999999999999887 6777777753 32 5789999985
No 442
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=86.31 E-value=0.6 Score=46.07 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=31.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
.+..|||+|+|-+|..+|..|...|. +|.++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34579999999999999999999998 999999984
No 443
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.27 E-value=0.64 Score=44.58 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
..|.|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 369999999999999999999997 999999874
No 444
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.26 E-value=0.66 Score=41.54 Aligned_cols=32 Identities=34% Similarity=0.529 Sum_probs=29.2
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|+|.|| |.-|...+..|.++|++|.++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4899997 9999999999999999999998863
No 445
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.24 E-value=0.69 Score=43.37 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...|+|||+|-+|.++|..|++.|.+|.|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3479999999999999999999999999998874
No 446
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=86.19 E-value=0.42 Score=47.19 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCC-------CcEEEEccCCC
Q 011414 24 DLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G-------~~VlvlE~~~~ 56 (486)
.|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998765
No 447
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=86.15 E-value=0.77 Score=44.10 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=29.6
Q ss_pred CcccEEEECCC-hhHHHHHHHHhhCCCcEEEEccC
Q 011414 21 TAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 21 ~~~DViIIGaG-l~GL~aA~~La~~G~~VlvlE~~ 54 (486)
....|+|||+| +.|..+|..|...|.+|++++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 44679999999 67999999999999999988664
No 448
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.12 E-value=0.74 Score=43.46 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=30.7
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 24 DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
.|+|.|| |+-|...+.+|.++|++|.++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 4899997 999999999999999999999887644
No 449
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=86.05 E-value=0.67 Score=45.05 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|.+.|..|++.|++|.+.+++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 359999999999999999999999999999875
No 450
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=86.02 E-value=0.47 Score=51.16 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999999999999875
No 451
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.99 E-value=0.39 Score=47.87 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=27.9
Q ss_pred ccEEEECCChhHHHHHHHHhh-CCCcEEEEc
Q 011414 23 FDLIVIGTGLPESVISAAASA-SGKSVLHLD 52 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~-~G~~VlvlE 52 (486)
..|.|||+|.-|...|..|++ +|++|.+++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 369999999999999999998 599999999
No 452
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=85.92 E-value=0.58 Score=47.60 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
....|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3457999999999999999999999999999985
No 453
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=85.86 E-value=0.63 Score=43.74 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|.|||+|.-|...|..|++ |++|.+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 58999999999999999999 99999999874
No 454
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=85.86 E-value=0.65 Score=45.74 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-cEEEEccC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~ 54 (486)
.+..|+|+|+|-+|..+|..|...|. +|.++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 44679999999999999999999998 79999998
No 455
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.84 E-value=0.6 Score=43.83 Aligned_cols=33 Identities=6% Similarity=0.139 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|+|+|+|-.|..+|..|++.|.+|.|+.|+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999998863
No 456
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=85.82 E-value=0.64 Score=48.29 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
...|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 35799999999999999999999999999998654
No 457
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=85.78 E-value=1.2 Score=47.06 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHH-cCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
..+.++|.+.++. .|.++ ++..|+.|..+ ++++++|++.+|.+++|+.||+
T Consensus 124 ~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e--~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMI-FQQAVEDLIVE--NDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EECCEEEEEES--SSBEEEEEETTSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEEEEEEEEec--CCEEEEEEECCCCEEECCEEEE
Confidence 3577888888777 58888 78899999876 6788899998998999999885
No 458
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.71 E-value=0.86 Score=43.41 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (486)
..|+|||+|-.|..+|..|++.|. +|.|+.|+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999997 999998863
No 459
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=85.59 E-value=0.84 Score=44.93 Aligned_cols=52 Identities=13% Similarity=0.131 Sum_probs=40.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEe-CCCc--EEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL-ASGQ--DILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~-~~G~--~i~A~~VI~ 332 (486)
.++.+.|.+.+...|++|++++.|++|..+ ++..+.|++ .+|+ +++||.||.
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~~g~~~~~~a~~vV~ 157 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDL--QGERPYVTFERDGERLRLDCDYIAG 157 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECT--TSSSCEEEEEETTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEe--cCCceEEEEecCCcEEEEEeCEEEE
Confidence 467788888888889999999999999764 222245666 6887 799999984
No 460
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=85.58 E-value=0.57 Score=44.86 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G--~~VlvlE~~~ 55 (486)
.|.|||+|..|...|..|+++| .+|.++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 7999999874
No 461
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.49 E-value=0.68 Score=45.76 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|+|||+|-.|+.+|..|+..|.+|+++|++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 462
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=85.43 E-value=0.73 Score=42.66 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 469999999999999999999999999999874
No 463
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.42 E-value=0.62 Score=41.85 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=30.1
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIG-aGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|+|.| +|.-|...+..|.++|++|.++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4699999 59999999999999999999999974
No 464
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.28 E-value=0.65 Score=43.17 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCc-EEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~-VlvlE~~~ 55 (486)
..|.|||+|.-|...|..|+++|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4699999999999999999999999 99999864
No 465
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=85.26 E-value=0.74 Score=44.40 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=31.2
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 21 TAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 21 ~~~DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
...-|+|.|| |.-|...+..|.+.|++|.++.++..-
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 3456999998 999999999999999999999988643
No 466
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.16 E-value=0.64 Score=52.33 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC-cEEEEccCCC
Q 011414 24 DLIVIGTGLPESVISAAASASGK-SVLHLDPNPF 56 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~-~VlvlE~~~~ 56 (486)
.|+|||+|..|+-+|..|++.|. +|++++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 79999999999999999999996 8999999873
No 467
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=85.02 E-value=1.5 Score=46.23 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=36.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CcEEEEccCCCCCCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSH 60 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~GG~ 60 (486)
.++||||||+|++||+||+.|+++| .+|+||||....+|.
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 4689999999999999999999999 999999999877664
No 468
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=84.98 E-value=0.85 Score=41.97 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCC----cEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGK----SVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~----~VlvlE~~~ 55 (486)
.|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 59999999999999999999998 999999974
No 469
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=84.83 E-value=0.62 Score=50.02 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=35.0
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCcEEEEccCCCCCCCc
Q 011414 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (486)
Q Consensus 23 ~DViIIG--aGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (486)
.+|+||| +|..|+-+|..|++.|.+|+++++.+.+....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc
Confidence 3599999 99999999999999999999999998876543
No 470
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=84.35 E-value=0.73 Score=43.31 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...|+|||+|-.|...|..|++.|.+|.+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3469999999999999999999999999999873
No 471
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=84.30 E-value=0.7 Score=44.02 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=27.3
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.|-+||-|.-|...|..|.++|++|.+++++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 599999999999999999999999999998754
No 472
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=84.21 E-value=1.2 Score=41.51 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.+.|||+|-.|...|..|.+.|.+|.+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 473
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=84.20 E-value=0.86 Score=46.36 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..-|+|+|+|-.|..+|..|+..|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3469999999999999999999999999999864
No 474
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=84.19 E-value=0.75 Score=43.38 Aligned_cols=34 Identities=9% Similarity=0.175 Sum_probs=30.0
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~--G~~VlvlE~~~ 55 (486)
...|.|||+|.-|...|..|+++ |++|.+++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 34799999999999999999988 68999999864
No 475
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=84.18 E-value=0.84 Score=46.27 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..|+|+|+|..|...|..|++.|.+|.+++++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 469999999999999999999999999998863
No 476
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.17 E-value=1.2 Score=42.37 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=31.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
....|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34569999999999999999999999999999864
No 477
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=84.16 E-value=1.9 Score=44.25 Aligned_cols=53 Identities=19% Similarity=0.099 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCc---EEEcCEEE-ECC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ---DILSHKLV-LDP 334 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~---~i~A~~VI-~~p 334 (486)
..+-+.|.+.++..|++|+++++|++|..+ ++. +.|++.+|. +++||.|| ++.
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgADG 162 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDD--GAG-VTVEVRGPEGKHTLRAAYLVGCDG 162 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEE--TTE-EEEEEEETTEEEEEEESEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEc--CCe-EEEEEEcCCCCEEEEeCEEEECCC
Confidence 467788888888899999999999999887 444 356666665 79999998 443
No 478
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=84.10 E-value=1.2 Score=45.83 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=40.6
Q ss_pred cchHHHHHHHHHHHcC-cEEEeCCceeEEEEecCCCeEEEEEeC--CC-----cEEEcCEEEEC
Q 011414 278 QGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLA--SG-----QDILSHKLVLD 333 (486)
Q Consensus 278 ~~~L~qal~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~~--~G-----~~i~A~~VI~~ 333 (486)
-.....++.+.+...| .+|++++.|++|..+++++++++|+.. +| .+++|+.||+.
T Consensus 220 r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIla 283 (504)
T 1n4w_A 220 KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLG 283 (504)
T ss_dssp BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEEC
T ss_pred ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEc
Confidence 4455566666666676 899999999999987312378999874 56 36889988853
No 479
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=84.09 E-value=1.5 Score=41.52 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=37.3
Q ss_pred CCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 8 SELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 8 ~~~~~~~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.+|....+..+. ...|.|||.|.-|...|..|+..|.+|+.++++..
T Consensus 110 g~w~~~~~~~l~--g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 156 (290)
T 3gvx_A 110 GIFRQSPTTLLY--GKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSV 156 (290)
T ss_dssp TCCCCCCCCCCT--TCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred cccccCCceeee--cchheeeccCchhHHHHHHHHhhCcEEEEEecccc
Confidence 456554443333 34699999999999999999999999999998754
No 480
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=83.97 E-value=2.2 Score=40.72 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=40.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCcEEEcCEEEE
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A~~VI~ 332 (486)
.++.+.+.+.++.+|.++++++.|++|..+ ++...+|++.+| ++.+|+||+
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~v~~~~g-~~~~d~vV~ 126 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHF--GERLRVVARDGR-QWLARAVIS 126 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEE--TTEEEEEETTSC-EEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEC--CCcEEEEEeCCC-EEEeCEEEE
Confidence 467777778888899999999999999876 554333877676 899999885
No 481
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=83.97 E-value=1.2 Score=47.98 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
-.|.|||+|..|.-.|..++.+|++|+++|.++.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 4699999999999999999999999999998753
No 482
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=83.93 E-value=0.81 Score=44.89 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=28.0
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 18 ~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
++..+..|+|+|+|..|..+|.+|++ .++|.+.+++
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~ 47 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVN 47 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESC
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcC
Confidence 44456789999999999999999986 4789988765
No 483
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=83.92 E-value=1 Score=42.60 Aligned_cols=31 Identities=6% Similarity=0.263 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 011414 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (486)
..|+|+|+|-.|..+|..|++.| +|.++.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999886
No 484
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=83.86 E-value=1.8 Score=41.49 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=33.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
+.....|.|||.|.-|...|..|...|.+|++++++..
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDI 176 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 33445699999999999999999999999999998753
No 485
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=83.81 E-value=0.83 Score=40.87 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=29.6
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIG-aGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|+|.| +|.-|...+..|.++|++|.++.|+.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 489999 79999999999999999999999875
No 486
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=83.75 E-value=1.9 Score=41.27 Aligned_cols=49 Identities=24% Similarity=0.221 Sum_probs=37.3
Q ss_pred CCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 8 SELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 8 ~~~~~~~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.+|....+...+.....|.|||.|.-|...|..|...|.+|++++++..
T Consensus 128 g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (307)
T 1wwk_A 128 GVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPN 176 (307)
T ss_dssp TCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 3575322233344445699999999999999999999999999998753
No 487
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=83.74 E-value=0.83 Score=42.37 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=27.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEcc
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~ 53 (486)
.|.|||+|.-|...|..|+++|++|.+.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 488999999999999999999999999866
No 488
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.49 E-value=1 Score=41.69 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=29.8
Q ss_pred CCcccEEEECC---ChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 20 PTAFDLIVIGT---GLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 20 ~~~~DViIIGa---Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
....-|+|.|| |--|...|..|++.|.+|.++.+++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 34456899996 3679999999999999999998874
No 489
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=83.46 E-value=2 Score=44.07 Aligned_cols=53 Identities=13% Similarity=0.102 Sum_probs=41.6
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCeEEEEEeCCCc---EEEcCEEE-ECC
Q 011414 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ---DILSHKLV-LDP 334 (486)
Q Consensus 279 ~~L~qal~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~---~i~A~~VI-~~p 334 (486)
..+-+.|.+.++..|++|+++++|++|..+ ++. +.|++.+|. +++||.|| ++.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgADG 163 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDE--GDH-VVVEVEGPDGPRSLTTRYVVGCDG 163 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEEC--SSC-EEEEEECSSCEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCE-EEEEEEcCCCcEEEEeCEEEEccC
Confidence 467788888888899999999999999876 333 357666765 79999998 443
No 490
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.28 E-value=1 Score=42.78 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3569999999999999999999999999999864
No 491
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=83.27 E-value=1.5 Score=42.28 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=32.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
+.....|.|||.|..|...|..|+..|.+|++++++.
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3344579999999999999999999999999999865
No 492
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=83.26 E-value=0.77 Score=43.30 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
.|.|||+|.-|...|..|++.|++|.+++ +.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 69999999999999999999999999998 54
No 493
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=83.25 E-value=1.2 Score=44.13 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 011414 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (486)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (486)
...++|+|+|+-+..+|..++..|++|+|+|.++.+
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 357999999999999999999999999999998753
No 494
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=83.15 E-value=1.2 Score=43.38 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=30.4
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCC--cEEEEccCC
Q 011414 21 TAFDLIVIGT-GLPESVISAAASASGK--SVLHLDPNP 55 (486)
Q Consensus 21 ~~~DViIIGa-Gl~GL~aA~~La~~G~--~VlvlE~~~ 55 (486)
....|.|||+ |..|+++|..|+..|. +|.++|.+.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 4467999998 9999999999999995 899999853
No 495
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=83.07 E-value=1.6 Score=40.26 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=29.4
Q ss_pred cccEEEECC-Ch-hHHHHHHHHhhCCCcEEEEccCC
Q 011414 22 AFDLIVIGT-GL-PESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 22 ~~DViIIGa-Gl-~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
..-|+|.|+ |- -|...|..|+++|++|++++++.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 345899998 74 89999999999999999998863
No 496
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=82.99 E-value=0.79 Score=45.32 Aligned_cols=40 Identities=23% Similarity=0.254 Sum_probs=35.3
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCC---cEEEEccCC-CCCCCc
Q 011414 22 AFDLIVIGT-GLPESVISAAASASGK---SVLHLDPNP-FYGSHF 61 (486)
Q Consensus 22 ~~DViIIGa-Gl~GL~aA~~La~~G~---~VlvlE~~~-~~GG~~ 61 (486)
...|+|||+ |..|+.|+..+..-|. +|.++|.+. .-||..
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~ 258 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPF 258 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCch
Confidence 458999999 9999999999999997 999999986 557763
No 497
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=82.98 E-value=2 Score=41.63 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=32.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 011414 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (486)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (486)
.....|.|||.|..|...|..|+..|.+|++++++..
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 3445699999999999999999999999999998764
No 498
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=82.86 E-value=0.93 Score=43.12 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 011414 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (486)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (486)
.|.|||+|..|.+.|..|++.|. +|.++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 58999999999999999999998 899999875
No 499
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=82.86 E-value=1.1 Score=43.31 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=30.8
Q ss_pred CCcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 011414 20 PTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (486)
Q Consensus 20 ~~~~DViIIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (486)
|....|+|+|| |.-|...+..|.+.|++|.++.|+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 33457999998 9999999999999999999999975
No 500
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=82.84 E-value=0.97 Score=45.87 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhC--------------------C-CcEEEEccCCCC
Q 011414 23 FDLIVIGTGLPESVISAAASAS--------------------G-KSVLHLDPNPFY 57 (486)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--------------------G-~~VlvlE~~~~~ 57 (486)
-.|+|||+|..|+-+|..|++. | .+|.++++++.+
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 4799999999999999999974 6 599999998654
Done!